Query 000628
Match_columns 1383
No_of_seqs 883 out of 5992
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 20:58:29 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000628.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000628hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 4E-242 9E-247 2226.5 96.7 1268 51-1377 12-1298(1391)
2 PLN03140 ABC transporter G fam 100.0 2E-222 5E-227 2202.8 135.9 1356 4-1378 3-1391(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 6E-175 1E-179 1755.2 127.2 1216 113-1378 3-1280(1394)
4 KOG0061 Transporter, ABC super 100.0 3.8E-83 8.2E-88 798.7 49.2 502 851-1377 22-532 (613)
5 PLN03211 ABC transporter G-25; 100.0 3.1E-82 6.7E-87 799.0 56.1 511 851-1378 36-580 (659)
6 TIGR00955 3a01204 The Eye Pigm 100.0 2E-80 4.4E-85 784.3 52.8 490 879-1378 37-536 (617)
7 KOG0061 Transporter, ABC super 100.0 8.9E-80 1.9E-84 768.4 57.4 587 133-797 21-608 (613)
8 TIGR00955 3a01204 The Eye Pigm 100.0 3.1E-79 6.7E-84 773.5 58.0 572 181-796 35-612 (617)
9 PLN03211 ABC transporter G-25; 100.0 6.7E-78 1.5E-82 759.6 63.1 609 133-797 35-658 (659)
10 PLN03140 ABC transporter G fam 100.0 2.7E-76 5.8E-81 793.0 62.4 599 131-798 861-1467(1470)
11 KOG0055 Multidrug/pheromone ex 100.0 5E-76 1.1E-80 739.3 56.8 765 179-1092 361-1208(1228)
12 TIGR00956 3a01205 Pleiotropic 100.0 1.3E-76 2.7E-81 800.7 53.9 490 878-1378 72-596 (1394)
13 TIGR01257 rim_protein retinal- 100.0 1.7E-69 3.7E-74 725.3 71.6 217 854-1093 1937-2155(2272)
14 KOG0054 Multidrug resistance-a 100.0 1.3E-70 2.9E-75 707.5 53.2 749 184-1093 534-1358(1381)
15 KOG0065 Pleiotropic drug resis 100.0 8.5E-73 1.8E-77 707.3 31.3 533 182-763 802-1347(1391)
16 PLN03130 ABC transporter C fam 100.0 9.5E-67 2.1E-71 711.1 64.3 212 853-1093 1236-1457(1622)
17 PLN03232 ABC transporter C fam 100.0 2.6E-66 5.6E-71 707.8 63.5 212 853-1093 1233-1454(1495)
18 COG1123 ATPase components of v 100.0 1.9E-65 4.2E-70 606.7 49.6 474 184-1092 22-514 (539)
19 PTZ00265 multidrug resistance 100.0 5.5E-65 1.2E-69 687.6 59.2 217 853-1092 1164-1447(1466)
20 TIGR00957 MRP_assoc_pro multi 100.0 1.2E-63 2.7E-68 682.5 63.0 212 853-1093 1283-1504(1522)
21 PRK13549 xylose transporter AT 100.0 4.5E-64 9.7E-69 624.7 49.4 460 184-1094 18-491 (506)
22 PRK10762 D-ribose transporter 100.0 8E-64 1.7E-68 621.7 48.2 450 184-1094 17-481 (501)
23 PRK09700 D-allose transporter 100.0 6.3E-64 1.4E-68 624.4 46.9 458 184-1092 18-493 (510)
24 PRK10261 glutathione transport 100.0 2.7E-63 5.8E-68 629.0 52.0 488 184-1093 29-549 (623)
25 PRK15439 autoinducer 2 ABC tra 100.0 3.5E-63 7.6E-68 616.3 48.8 453 184-1093 24-488 (510)
26 PRK15134 microcin C ABC transp 100.0 4.4E-63 9.6E-68 619.0 48.4 464 184-1092 22-510 (529)
27 PTZ00243 ABC transporter; Prov 100.0 2.7E-62 5.9E-67 666.9 59.9 211 853-1092 1307-1528(1560)
28 TIGR03269 met_CoM_red_A2 methy 100.0 5.9E-63 1.3E-67 617.1 48.7 445 184-1092 13-512 (520)
29 TIGR02633 xylG D-xylose ABC tr 100.0 1.2E-62 2.7E-67 611.8 48.1 459 184-1092 14-487 (500)
30 TIGR01271 CFTR_protein cystic 100.0 1.8E-61 4E-66 658.9 62.8 210 853-1092 1216-1435(1490)
31 PRK11288 araG L-arabinose tran 100.0 2.4E-62 5.2E-67 608.5 48.3 451 184-1094 17-482 (501)
32 PRK10982 galactose/methyl gala 100.0 1.7E-61 3.6E-66 599.9 47.1 449 184-1092 11-475 (491)
33 PRK10938 putative molybdenum t 100.0 2.4E-60 5.1E-65 589.9 42.4 446 185-1089 17-484 (490)
34 COG4172 ABC-type uncharacteriz 100.0 4.5E-58 9.7E-63 509.1 42.1 470 182-1092 21-511 (534)
35 PRK11819 putative ABC transpor 100.0 1.4E-57 3.1E-62 571.3 51.7 201 854-1091 324-527 (556)
36 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.4E-57 3E-62 571.4 48.8 201 854-1091 322-525 (552)
37 PRK15064 ABC transporter ATP-b 100.0 2.2E-57 4.8E-62 567.8 48.0 198 854-1092 319-520 (530)
38 PRK13409 putative ATPase RIL; 100.0 7.5E-56 1.6E-60 552.8 42.0 211 854-1106 340-554 (590)
39 COG1129 MglA ABC-type sugar tr 100.0 1.7E-54 3.7E-59 510.6 43.8 451 182-1091 19-484 (500)
40 PRK10636 putative ABC transpor 100.0 8.7E-54 1.9E-58 542.4 51.6 197 854-1092 312-512 (638)
41 PRK11147 ABC transporter ATPas 100.0 1.4E-53 3E-58 542.2 53.5 202 854-1092 319-523 (635)
42 PLN03073 ABC transporter F fam 100.0 6.4E-51 1.4E-55 516.6 51.0 200 854-1092 508-709 (718)
43 COG0488 Uup ATPase components 100.0 3.3E-51 7.1E-56 497.0 41.8 225 182-433 14-240 (530)
44 COG3845 ABC-type uncharacteriz 100.0 4.4E-50 9.6E-55 461.7 40.4 458 183-1094 16-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 1.3E-44 2.8E-49 376.2 20.7 205 877-1092 12-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 2.4E-43 5.2E-48 366.7 19.4 222 182-454 13-238 (240)
47 KOG0927 Predicted transporter 100.0 1.2E-41 2.6E-46 392.1 28.1 202 853-1092 388-591 (614)
48 COG1135 AbcC ABC-type metal io 100.0 3.2E-42 7E-47 375.7 19.7 203 879-1093 18-227 (339)
49 COG1127 Ttg2A ABC-type transpo 100.0 9.6E-42 2.1E-46 360.2 20.0 231 854-1108 8-250 (263)
50 COG1131 CcmA ABC-type multidru 100.0 1.7E-41 3.6E-46 390.0 23.1 202 879-1092 17-221 (293)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 4.3E-41 9.3E-46 367.4 23.7 217 854-1094 4-224 (254)
52 COG1116 TauB ABC-type nitrate/ 100.0 2.3E-41 5E-46 363.8 20.9 203 855-1083 4-207 (248)
53 COG1125 OpuBA ABC-type proline 100.0 1.4E-41 3E-46 359.4 17.9 204 878-1093 12-221 (309)
54 COG1120 FepC ABC-type cobalami 100.0 3.3E-41 7.1E-46 370.5 21.0 218 855-1094 3-225 (258)
55 COG3839 MalK ABC-type sugar tr 100.0 6E-41 1.3E-45 382.0 20.3 217 186-453 18-235 (338)
56 COG1135 AbcC ABC-type metal io 100.0 8.8E-41 1.9E-45 364.5 20.6 224 182-456 17-246 (339)
57 COG3638 ABC-type phosphate/pho 100.0 7E-41 1.5E-45 352.7 18.6 221 854-1095 3-235 (258)
58 COG1131 CcmA ABC-type multidru 100.0 1.6E-40 3.4E-45 381.9 23.1 212 183-437 17-230 (293)
59 COG1136 SalX ABC-type antimicr 100.0 1.7E-40 3.6E-45 358.0 21.1 193 880-1085 18-219 (226)
60 COG4555 NatA ABC-type Na+ tran 100.0 5.4E-41 1.2E-45 343.4 15.0 202 880-1093 15-218 (245)
61 KOG0058 Peptide exporter, ABC 100.0 2.4E-40 5.1E-45 397.1 22.0 213 179-433 476-691 (716)
62 COG1125 OpuBA ABC-type proline 100.0 3.4E-40 7.4E-45 348.9 19.7 208 183-433 13-225 (309)
63 COG1118 CysA ABC-type sulfate/ 100.0 1.9E-40 4.1E-45 360.7 17.8 206 878-1093 13-223 (345)
64 COG3842 PotA ABC-type spermidi 100.0 2.3E-40 5E-45 379.2 19.5 223 183-455 17-240 (352)
65 COG2884 FtsE Predicted ATPase 100.0 4.6E-40 1E-44 334.1 19.1 212 855-1091 2-220 (223)
66 COG1120 FepC ABC-type cobalami 100.0 3.6E-40 7.8E-45 362.3 18.7 211 183-432 14-227 (258)
67 COG1117 PstB ABC-type phosphat 100.0 5E-40 1.1E-44 339.7 18.0 218 854-1092 7-232 (253)
68 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2E-39 4.2E-44 354.4 23.6 207 185-433 18-227 (254)
69 COG3839 MalK ABC-type sugar tr 100.0 4E-40 8.7E-45 375.3 18.7 201 882-1094 18-220 (338)
70 COG1118 CysA ABC-type sulfate/ 100.0 7.7E-40 1.7E-44 355.9 19.0 223 182-453 13-239 (345)
71 TIGR01257 rim_protein retinal- 100.0 5.8E-35 1.3E-39 393.7 70.1 216 853-1092 927-1144(2272)
72 COG1127 Ttg2A ABC-type transpo 100.0 2.7E-39 5.9E-44 341.6 19.9 210 182-433 19-235 (263)
73 COG3842 PotA ABC-type spermidi 100.0 1.2E-39 2.7E-44 373.2 18.1 205 878-1093 16-222 (352)
74 COG1116 TauB ABC-type nitrate/ 100.0 3.9E-39 8.3E-44 346.7 20.1 192 184-420 16-207 (248)
75 COG4555 NatA ABC-type Na+ tran 100.0 1.4E-39 3E-44 333.1 15.6 212 178-433 9-222 (245)
76 PRK13537 nodulation ABC transp 100.0 1.3E-38 2.9E-43 369.6 25.6 214 854-1092 7-222 (306)
77 COG3638 ABC-type phosphate/pho 100.0 3.6E-39 7.7E-44 339.8 18.3 217 182-433 15-237 (258)
78 COG2274 SunT ABC-type bacterio 100.0 1.4E-38 3.1E-43 398.6 23.9 207 185-433 487-696 (709)
79 COG1136 SalX ABC-type antimicr 100.0 2.7E-38 5.9E-43 340.9 22.7 195 184-422 18-220 (226)
80 TIGR02314 ABC_MetN D-methionin 100.0 4.7E-38 1E-42 367.7 25.2 217 855-1092 2-225 (343)
81 COG1137 YhbG ABC-type (unclass 100.0 3.8E-39 8.2E-44 329.5 13.6 209 875-1093 12-224 (243)
82 COG3840 ThiQ ABC-type thiamine 100.0 1.8E-38 3.9E-43 319.4 18.3 201 189-432 17-218 (231)
83 cd03261 ABC_Org_Solvent_Resist 100.0 5.1E-38 1.1E-42 352.9 22.9 202 880-1092 13-221 (235)
84 PRK11650 ugpC glycerol-3-phosp 100.0 9.4E-38 2E-42 368.2 24.3 215 855-1093 4-220 (356)
85 TIGR03265 PhnT2 putative 2-ami 100.0 1E-37 2.2E-42 367.5 24.6 215 854-1093 4-220 (353)
86 PRK11650 ugpC glycerol-3-phosp 100.0 9.5E-38 2.1E-42 368.2 23.6 206 184-432 17-223 (356)
87 TIGR02314 ABC_MetN D-methionin 100.0 2.5E-37 5.5E-42 361.5 26.9 206 184-432 18-229 (343)
88 PRK11432 fbpC ferric transport 100.0 1.9E-37 4.1E-42 364.5 25.4 215 854-1093 6-222 (351)
89 KOG0057 Mitochondrial Fe/S clu 100.0 1.7E-37 3.6E-42 359.9 24.0 229 129-433 343-574 (591)
90 PRK13536 nodulation factor exp 100.0 2.2E-37 4.7E-42 362.9 25.3 214 854-1092 41-256 (340)
91 TIGR01188 drrA daunorubicin re 100.0 1.3E-37 2.8E-42 361.8 23.1 202 879-1092 5-208 (302)
92 COG1117 PstB ABC-type phosphat 100.0 7.3E-38 1.6E-42 323.7 18.6 222 183-452 19-248 (253)
93 TIGR03258 PhnT 2-aminoethylpho 100.0 2.2E-37 4.7E-42 365.1 24.9 215 854-1093 5-224 (362)
94 TIGR03265 PhnT2 putative 2-ami 100.0 2.1E-37 4.6E-42 364.8 24.5 207 184-433 17-224 (353)
95 PRK11432 fbpC ferric transport 100.0 2.3E-37 5E-42 363.8 24.5 206 184-432 19-225 (351)
96 COG1122 CbiO ABC-type cobalt t 100.0 1.1E-37 2.5E-42 343.4 20.1 214 855-1092 4-223 (235)
97 COG1124 DppF ABC-type dipeptid 100.0 7.2E-38 1.6E-42 333.1 17.7 217 854-1093 3-227 (252)
98 cd03259 ABC_Carb_Solutes_like 100.0 3.1E-37 6.7E-42 341.3 23.1 199 880-1090 13-213 (213)
99 TIGR01186 proV glycine betaine 100.0 4.1E-37 8.9E-42 361.5 25.2 208 183-433 5-219 (363)
100 KOG0058 Peptide exporter, ABC 100.0 2.3E-36 5.1E-41 362.8 31.8 223 845-1092 455-686 (716)
101 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.3E-37 1.2E-41 341.1 24.5 200 880-1092 17-218 (220)
102 TIGR00960 3a0501s02 Type II (G 100.0 3.2E-37 6.9E-42 342.0 22.6 208 855-1085 2-215 (216)
103 PRK13537 nodulation ABC transp 100.0 6.3E-37 1.4E-41 355.6 25.9 206 184-433 20-227 (306)
104 COG3840 ThiQ ABC-type thiamine 100.0 1.2E-37 2.7E-42 313.4 16.8 196 885-1092 17-214 (231)
105 PRK10851 sulfate/thiosulfate t 100.0 5.7E-37 1.2E-41 361.2 24.9 217 855-1093 3-222 (353)
106 cd03269 ABC_putative_ATPase Th 100.0 6.1E-37 1.3E-41 338.2 23.4 198 880-1090 13-210 (210)
107 TIGR01186 proV glycine betaine 100.0 5E-37 1.1E-41 360.8 24.1 204 878-1093 4-215 (363)
108 TIGR01288 nodI ATP-binding ABC 100.0 7.5E-37 1.6E-41 355.5 25.3 214 854-1092 4-219 (303)
109 cd03265 ABC_DrrA DrrA is the A 100.0 5.9E-37 1.3E-41 340.8 23.4 201 880-1092 13-216 (220)
110 PRK09452 potA putrescine/sperm 100.0 7E-37 1.5E-41 362.0 25.4 215 854-1093 14-230 (375)
111 PRK09452 potA putrescine/sperm 100.0 6.2E-37 1.3E-41 362.4 24.7 206 184-432 27-233 (375)
112 TIGR03258 PhnT 2-aminoethylpho 100.0 5.2E-37 1.1E-41 361.9 23.9 206 184-432 18-227 (362)
113 cd03301 ABC_MalK_N The N-termi 100.0 1E-36 2.3E-41 337.1 23.6 199 880-1090 13-213 (213)
114 COG4988 CydD ABC-type transpor 100.0 8.1E-37 1.8E-41 361.0 23.9 206 185-433 335-543 (559)
115 PRK11153 metN DL-methionine tr 100.0 1.1E-36 2.4E-41 358.8 25.1 217 855-1092 2-225 (343)
116 cd03266 ABC_NatA_sodium_export 100.0 1.1E-36 2.3E-41 338.3 23.0 198 881-1090 19-218 (218)
117 cd03219 ABC_Mj1267_LivG_branch 100.0 1.4E-36 3E-41 341.6 24.0 204 880-1092 13-227 (236)
118 PRK11607 potG putrescine trans 100.0 1.8E-36 3.9E-41 359.2 26.2 215 854-1093 19-235 (377)
119 PRK11000 maltose/maltodextrin 100.0 1.3E-36 2.8E-41 361.0 24.9 214 855-1093 4-219 (369)
120 KOG0055 Multidrug/pheromone ex 100.0 4E-37 8.7E-42 388.6 21.4 214 178-433 997-1213(1228)
121 cd03296 ABC_CysA_sulfate_impor 100.0 2E-36 4.4E-41 340.8 24.8 216 855-1092 3-221 (239)
122 cd03218 ABC_YhbG The ABC trans 100.0 1.5E-36 3.3E-41 340.4 23.5 201 880-1092 13-217 (232)
123 cd03261 ABC_Org_Solvent_Resist 100.0 2.4E-36 5.1E-41 339.4 25.1 207 184-432 13-225 (235)
124 PRK11174 cysteine/glutathione 100.0 2.2E-36 4.8E-41 384.3 27.4 207 184-433 363-572 (588)
125 PRK09536 btuD corrinoid ABC tr 100.0 1.5E-36 3.3E-41 360.8 24.1 217 855-1093 4-224 (402)
126 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.3E-36 2.8E-41 337.6 21.9 193 880-1085 17-217 (218)
127 TIGR03522 GldA_ABC_ATP gliding 100.0 1.3E-36 2.9E-41 352.9 22.7 213 855-1093 3-217 (301)
128 TIGR01188 drrA daunorubicin re 100.0 1.6E-36 3.5E-41 352.5 23.5 206 184-433 6-213 (302)
129 cd03260 ABC_PstB_phosphate_tra 100.0 1.7E-36 3.7E-41 338.8 22.8 202 880-1092 13-224 (227)
130 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.6E-36 3.5E-41 347.0 23.0 205 876-1092 33-245 (269)
131 cd03268 ABC_BcrA_bacitracin_re 100.0 1.6E-36 3.5E-41 334.3 22.2 195 880-1090 13-208 (208)
132 COG0410 LivF ABC-type branched 100.0 7.2E-37 1.6E-41 323.4 18.5 206 876-1094 12-223 (237)
133 cd03234 ABCG_White The White s 100.0 3.5E-36 7.6E-41 335.8 25.0 221 855-1090 4-226 (226)
134 cd03258 ABC_MetN_methionine_tr 100.0 2.3E-36 5E-41 339.1 23.5 200 881-1092 19-225 (233)
135 PRK10851 sulfate/thiosulfate t 100.0 2.4E-36 5.3E-41 355.8 24.8 210 184-432 15-225 (353)
136 COG0410 LivF ABC-type branched 100.0 2.6E-36 5.7E-41 319.2 22.2 208 182-433 14-226 (237)
137 COG4152 ABC-type uncharacteriz 100.0 5.7E-37 1.2E-41 322.3 17.1 205 876-1093 11-215 (300)
138 COG1137 YhbG ABC-type (unclass 100.0 2.4E-37 5.1E-42 316.4 13.7 210 182-433 15-228 (243)
139 PRK11607 potG putrescine trans 100.0 2.6E-36 5.7E-41 357.8 24.7 206 184-432 32-238 (377)
140 cd03256 ABC_PhnC_transporter A 100.0 2.1E-36 4.6E-41 341.2 22.7 204 880-1092 14-229 (241)
141 PRK13637 cbiO cobalt transport 100.0 3.4E-36 7.5E-41 347.0 24.5 218 855-1092 3-229 (287)
142 cd03263 ABC_subfamily_A The AB 100.0 2.4E-36 5.2E-41 336.0 22.4 200 880-1092 15-216 (220)
143 cd03226 ABC_cobalt_CbiO_domain 100.0 1.3E-36 2.9E-41 334.1 20.1 192 880-1087 13-205 (205)
144 PRK09493 glnQ glutamine ABC tr 100.0 4.4E-36 9.6E-41 338.3 24.6 202 880-1092 14-220 (240)
145 PRK11629 lolD lipoprotein tran 100.0 5.6E-36 1.2E-40 335.8 25.3 217 854-1092 5-229 (233)
146 TIGR02673 FtsE cell division A 100.0 3.1E-36 6.8E-41 333.6 22.6 192 880-1082 15-212 (214)
147 PRK11264 putative amino-acid A 100.0 5.3E-36 1.1E-40 339.9 24.7 214 855-1092 4-228 (250)
148 PRK11153 metN DL-methionine tr 100.0 8E-36 1.7E-40 351.5 27.1 206 184-432 18-229 (343)
149 COG1122 CbiO ABC-type cobalt t 100.0 1.4E-36 3E-41 334.7 19.3 207 184-433 17-228 (235)
150 PRK11000 maltose/maltodextrin 100.0 4.4E-36 9.6E-41 356.5 24.8 206 184-432 16-222 (369)
151 COG1124 DppF ABC-type dipeptid 100.0 3.6E-36 7.9E-41 320.1 21.5 204 185-433 21-231 (252)
152 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.1E-36 1.1E-40 338.1 23.5 201 880-1092 14-220 (242)
153 cd03292 ABC_FtsE_transporter F 100.0 4.4E-36 9.6E-41 332.4 22.5 194 880-1085 14-213 (214)
154 PRK13536 nodulation factor exp 100.0 4.9E-36 1.1E-40 351.5 23.8 206 184-433 54-261 (340)
155 TIGR02315 ABC_phnC phosphonate 100.0 3.1E-36 6.7E-41 340.3 21.4 205 880-1093 15-231 (243)
156 PRK11248 tauB taurine transpor 100.0 8.2E-36 1.8E-40 338.2 24.8 200 880-1092 14-215 (255)
157 PRK13647 cbiO cobalt transport 100.0 6.5E-36 1.4E-40 342.7 24.1 214 855-1092 5-222 (274)
158 COG0411 LivG ABC-type branched 100.0 1.8E-36 3.9E-41 322.8 18.0 210 876-1094 13-236 (250)
159 cd03224 ABC_TM1139_LivF_branch 100.0 4.3E-36 9.3E-41 334.5 21.9 199 880-1092 13-216 (222)
160 COG2884 FtsE Predicted ATPase 100.0 2.7E-36 5.9E-41 306.7 18.3 204 179-426 10-219 (223)
161 PRK13651 cobalt transporter AT 100.0 6.9E-36 1.5E-40 346.1 24.1 219 855-1093 3-250 (305)
162 COG0411 LivG ABC-type branched 100.0 1.9E-36 4.2E-41 322.6 17.8 221 182-433 15-239 (250)
163 KOG0056 Heavy metal exporter H 100.0 6.5E-37 1.4E-41 345.2 14.8 244 113-433 507-761 (790)
164 PRK13634 cbiO cobalt transport 100.0 7.1E-36 1.5E-40 345.0 23.9 218 855-1092 3-230 (290)
165 PRK11831 putative ABC transpor 100.0 1E-35 2.2E-40 340.5 25.0 215 854-1092 7-228 (269)
166 PRK13643 cbiO cobalt transport 100.0 9.7E-36 2.1E-40 343.5 24.4 218 855-1093 2-229 (288)
167 cd03264 ABC_drug_resistance_li 100.0 7.5E-36 1.6E-40 329.7 22.4 197 880-1090 13-211 (211)
168 cd03262 ABC_HisP_GlnQ_permease 100.0 6.5E-36 1.4E-40 330.8 21.8 195 880-1085 13-212 (213)
169 PRK10908 cell division protein 100.0 1.1E-35 2.3E-40 331.1 23.7 209 855-1087 2-216 (222)
170 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.5E-35 3.2E-40 333.1 24.8 200 880-1092 14-216 (236)
171 PRK13631 cbiO cobalt transport 100.0 1E-35 2.2E-40 346.7 24.0 218 854-1092 21-260 (320)
172 PRK10895 lipopolysaccharide AB 100.0 1E-35 2.3E-40 335.5 23.4 214 855-1092 4-221 (241)
173 PRK10619 histidine/lysine/argi 100.0 1.8E-35 4E-40 336.5 25.3 215 854-1092 5-236 (257)
174 cd03257 ABC_NikE_OppD_transpor 100.0 1.2E-35 2.7E-40 332.2 23.4 200 881-1090 19-228 (228)
175 cd03265 ABC_DrrA DrrA is the A 100.0 1.2E-35 2.6E-40 330.2 23.0 205 184-431 13-219 (220)
176 cd03259 ABC_Carb_Solutes_like 100.0 1.2E-35 2.5E-40 328.8 22.7 200 184-426 13-213 (213)
177 PRK15079 oligopeptide ABC tran 100.0 2.2E-35 4.8E-40 345.1 26.2 230 854-1093 8-247 (331)
178 COG2274 SunT ABC-type bacterio 100.0 9.1E-35 2E-39 364.4 33.5 218 848-1093 465-692 (709)
179 COG4559 ABC-type hemin transpo 100.0 5.7E-36 1.2E-40 308.9 18.5 217 855-1094 2-227 (259)
180 PRK13636 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 341.1 24.4 216 854-1093 5-227 (283)
181 PRK13646 cbiO cobalt transport 100.0 1.2E-35 2.7E-40 342.5 23.5 217 855-1092 3-230 (286)
182 PRK13650 cbiO cobalt transport 100.0 1.1E-35 2.4E-40 341.6 23.0 216 854-1092 4-224 (279)
183 TIGR00972 3a0107s01c2 phosphat 100.0 2E-35 4.2E-40 334.4 24.6 214 855-1092 2-227 (247)
184 cd03235 ABC_Metallic_Cations A 100.0 6.1E-36 1.3E-40 330.9 20.1 199 880-1090 12-213 (213)
185 COG1132 MdlB ABC-type multidru 100.0 9.1E-36 2E-40 376.6 24.3 209 183-433 341-552 (567)
186 cd03296 ABC_CysA_sulfate_impor 100.0 2E-35 4.3E-40 332.7 24.3 210 184-432 15-225 (239)
187 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.9E-35 4.2E-40 338.1 24.5 208 182-432 35-249 (269)
188 TIGR03740 galliderm_ABC gallid 100.0 2.1E-35 4.6E-40 329.0 24.2 197 880-1093 13-209 (223)
189 cd03225 ABC_cobalt_CbiO_domain 100.0 8.2E-36 1.8E-40 329.5 20.7 192 880-1082 14-209 (211)
190 PRK11247 ssuB aliphatic sulfon 100.0 1.4E-35 3.1E-40 335.7 23.1 206 854-1092 12-218 (257)
191 TIGR02211 LolD_lipo_ex lipopro 100.0 2E-35 4.3E-40 328.9 23.6 195 880-1087 18-220 (221)
192 PRK13637 cbiO cobalt transport 100.0 2.3E-35 5.1E-40 340.1 24.7 218 184-444 20-248 (287)
193 cd03258 ABC_MetN_methionine_tr 100.0 1.6E-35 3.5E-40 332.2 22.7 205 185-432 19-229 (233)
194 cd03219 ABC_Mj1267_LivG_branch 100.0 2.7E-35 5.9E-40 331.1 24.3 215 184-432 13-231 (236)
195 TIGR01288 nodI ATP-binding ABC 100.0 2E-35 4.4E-40 343.5 24.0 206 184-433 17-224 (303)
196 TIGR03005 ectoine_ehuA ectoine 100.0 2.5E-35 5.5E-40 334.5 24.2 202 880-1092 13-231 (252)
197 PRK11124 artP arginine transpo 100.0 2.9E-35 6.3E-40 332.1 24.2 213 855-1092 3-225 (242)
198 PRK11300 livG leucine/isoleuci 100.0 2.4E-35 5.2E-40 335.4 23.8 218 854-1093 5-239 (255)
199 PRK13641 cbiO cobalt transport 100.0 2.5E-35 5.4E-40 340.1 24.2 218 855-1092 3-229 (287)
200 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.9E-35 6.2E-40 327.2 23.7 201 184-429 17-219 (220)
201 PRK13650 cbiO cobalt transport 100.0 5.5E-35 1.2E-39 335.9 26.6 205 184-432 20-228 (279)
202 PRK11614 livF leucine/isoleuci 100.0 2E-35 4.4E-40 332.3 22.4 213 854-1093 5-222 (237)
203 PRK13644 cbiO cobalt transport 100.0 2.2E-35 4.8E-40 338.3 23.1 200 880-1092 15-219 (274)
204 TIGR03522 GldA_ABC_ATP gliding 100.0 2.7E-35 5.8E-40 342.0 23.9 205 184-433 15-221 (301)
205 cd03301 ABC_MalK_N The N-termi 100.0 3E-35 6.6E-40 325.5 23.2 200 184-426 13-213 (213)
206 cd03256 ABC_PhnC_transporter A 100.0 2.8E-35 6E-40 332.2 23.2 214 184-432 14-233 (241)
207 PRK14247 phosphate ABC transpo 100.0 4.8E-35 1E-39 332.0 25.0 216 855-1092 4-229 (250)
208 PRK00635 excinuclease ABC subu 100.0 1.1E-33 2.3E-38 375.8 41.5 135 951-1093 759-902 (1809)
209 PRK14268 phosphate ABC transpo 100.0 5.1E-35 1.1E-39 332.9 25.1 214 854-1092 12-237 (258)
210 PRK14267 phosphate ABC transpo 100.0 4.6E-35 1E-39 332.7 24.7 217 854-1092 4-232 (253)
211 PRK14273 phosphate ABC transpo 100.0 5.1E-35 1.1E-39 332.4 25.0 215 854-1092 7-233 (254)
212 TIGR01978 sufC FeS assembly AT 100.0 4.4E-35 9.6E-40 331.0 24.3 207 880-1092 13-229 (243)
213 PRK10070 glycine betaine trans 100.0 3.9E-35 8.4E-40 348.6 24.9 207 183-432 40-253 (400)
214 COG4525 TauB ABC-type taurine 100.0 1.3E-35 2.9E-40 301.5 17.7 201 880-1093 18-220 (259)
215 PRK10070 glycine betaine trans 100.0 2.7E-35 5.8E-40 349.9 23.4 203 879-1093 40-250 (400)
216 PRK13652 cbiO cobalt transport 100.0 4.3E-35 9.4E-40 336.6 24.3 215 855-1093 4-223 (277)
217 PRK13548 hmuV hemin importer A 100.0 4E-35 8.7E-40 333.5 23.8 214 855-1093 3-226 (258)
218 TIGR00960 3a0501s02 Type II (G 100.0 1.5E-35 3.2E-40 328.6 19.7 195 184-422 16-216 (216)
219 cd03218 ABC_YhbG The ABC trans 100.0 4.1E-35 8.8E-40 328.8 23.5 205 184-432 13-221 (232)
220 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.6E-35 1.2E-39 377.1 28.1 205 184-433 466-673 (686)
221 cd03263 ABC_subfamily_A The AB 100.0 2.4E-35 5.2E-40 328.0 21.1 203 184-431 15-219 (220)
222 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.2E-35 9E-40 330.7 23.3 206 184-432 14-224 (242)
223 PRK13634 cbiO cobalt transport 100.0 3.9E-35 8.4E-40 338.8 23.5 206 184-432 20-234 (290)
224 TIGR03411 urea_trans_UrtD urea 100.0 5.2E-35 1.1E-39 330.1 23.8 203 880-1092 15-226 (242)
225 COG4618 ArpD ABC-type protease 100.0 2.5E-35 5.5E-40 338.2 21.4 236 127-435 324-562 (580)
226 PRK09984 phosphonate/organopho 100.0 4.9E-35 1.1E-39 334.0 23.8 220 854-1093 4-238 (262)
227 PRK13635 cbiO cobalt transport 100.0 4.7E-35 1E-39 336.2 23.7 215 855-1093 6-225 (279)
228 TIGR02315 ABC_phnC phosphonate 100.0 3E-35 6.5E-40 332.3 21.6 213 184-431 15-233 (243)
229 PRK13638 cbiO cobalt transport 100.0 4.6E-35 1E-39 335.6 23.3 213 855-1092 2-220 (271)
230 PRK14241 phosphate transporter 100.0 7.9E-35 1.7E-39 331.5 25.1 217 854-1092 4-237 (258)
231 cd03224 ABC_TM1139_LivF_branch 100.0 5.3E-35 1.1E-39 325.7 23.1 203 184-432 13-220 (222)
232 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.8E-35 8.3E-40 324.1 21.8 194 885-1090 16-211 (211)
233 TIGR03415 ABC_choXWV_ATP choli 100.0 4.3E-35 9.3E-40 345.7 23.6 204 878-1093 35-250 (382)
234 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.8E-35 6E-40 327.0 20.6 195 184-422 17-218 (218)
235 PRK11231 fecE iron-dicitrate t 100.0 5.2E-35 1.1E-39 332.4 23.2 217 855-1093 3-223 (255)
236 COG4559 ABC-type hemin transpo 100.0 3.9E-35 8.5E-40 302.7 19.9 208 184-433 14-230 (259)
237 PRK13647 cbiO cobalt transport 100.0 5.7E-35 1.2E-39 334.9 23.6 204 184-431 18-225 (274)
238 PRK10575 iron-hydroxamate tran 100.0 5.7E-35 1.2E-39 333.7 23.4 218 854-1093 11-233 (265)
239 TIGR03410 urea_trans_UrtE urea 100.0 4.6E-35 1E-39 327.9 22.2 199 880-1093 13-217 (230)
240 COG4181 Predicted ABC-type tra 100.0 2.5E-35 5.3E-40 293.6 17.5 200 876-1088 19-226 (228)
241 TIGR03415 ABC_choXWV_ATP choli 100.0 6.4E-35 1.4E-39 344.2 24.3 208 182-432 35-253 (382)
242 PRK00349 uvrA excinuclease ABC 100.0 1.5E-33 3.3E-38 362.1 39.0 123 954-1092 791-922 (943)
243 PRK13643 cbiO cobalt transport 100.0 8.1E-35 1.8E-39 335.8 24.4 223 185-451 20-254 (288)
244 PRK10253 iron-enterobactin tra 100.0 5.9E-35 1.3E-39 333.6 23.1 218 854-1093 7-229 (265)
245 cd03266 ABC_NatA_sodium_export 100.0 8.3E-35 1.8E-39 323.1 23.5 198 185-426 19-218 (218)
246 cd03260 ABC_PstB_phosphate_tra 100.0 5.6E-35 1.2E-39 326.5 22.2 204 184-430 13-226 (227)
247 cd03269 ABC_putative_ATPase Th 100.0 4.8E-35 1E-39 323.1 21.3 198 184-426 13-210 (210)
248 PRK10744 pstB phosphate transp 100.0 1.1E-34 2.3E-39 330.7 24.7 219 850-1092 9-239 (260)
249 PRK13649 cbiO cobalt transport 100.0 8.7E-35 1.9E-39 335.1 24.2 217 855-1092 3-229 (280)
250 PRK10584 putative ABC transpor 100.0 1.3E-34 2.9E-39 323.7 24.9 213 854-1088 6-226 (228)
251 PRK11308 dppF dipeptide transp 100.0 1.2E-34 2.6E-39 338.8 25.5 226 854-1093 5-240 (327)
252 PRK13639 cbiO cobalt transport 100.0 9.5E-35 2.1E-39 333.4 24.2 215 855-1093 2-222 (275)
253 cd03226 ABC_cobalt_CbiO_domain 100.0 4.5E-35 9.8E-40 322.0 20.6 192 184-423 13-205 (205)
254 TIGR01184 ntrCD nitrate transp 100.0 5.2E-35 1.1E-39 327.0 21.4 198 883-1092 1-199 (230)
255 PRK11022 dppD dipeptide transp 100.0 1.5E-34 3.3E-39 338.1 26.2 221 855-1093 4-239 (326)
256 TIGR02769 nickel_nikE nickel i 100.0 1E-34 2.3E-39 331.6 24.3 223 855-1092 3-235 (265)
257 PRK11629 lolD lipoprotein tran 100.0 1.1E-34 2.5E-39 325.2 24.1 201 184-428 22-229 (233)
258 PRK14242 phosphate transporter 100.0 1.4E-34 3E-39 328.8 25.0 221 852-1092 4-232 (253)
259 TIGR03873 F420-0_ABC_ATP propo 100.0 7.6E-35 1.6E-39 331.3 22.8 205 880-1093 14-222 (256)
260 cd03267 ABC_NatA_like Similar 100.0 9.7E-35 2.1E-39 326.1 23.3 201 878-1090 32-236 (236)
261 cd03233 ABC_PDR_domain1 The pl 100.0 1.2E-34 2.5E-39 317.5 23.4 196 854-1090 3-202 (202)
262 PRK11831 putative ABC transpor 100.0 1.5E-34 3.2E-39 330.9 25.1 207 184-432 20-232 (269)
263 PRK09536 btuD corrinoid ABC tr 100.0 9.6E-35 2.1E-39 345.4 24.4 209 184-432 16-227 (402)
264 cd03268 ABC_BcrA_bacitracin_re 100.0 7.5E-35 1.6E-39 321.0 21.7 195 184-426 13-208 (208)
265 cd03234 ABCG_White The White s 100.0 1E-34 2.3E-39 324.0 23.1 204 183-426 19-226 (226)
266 PRK14245 phosphate ABC transpo 100.0 1.8E-34 3.9E-39 327.1 25.3 219 854-1092 3-229 (250)
267 PRK13632 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 332.3 23.8 215 854-1092 7-226 (271)
268 PRK13635 cbiO cobalt transport 100.0 2.2E-34 4.7E-39 330.7 26.1 216 184-443 20-242 (279)
269 cd03300 ABC_PotA_N PotA is an 100.0 1.4E-34 3.1E-39 324.1 24.0 201 880-1092 13-215 (232)
270 COG4988 CydD ABC-type transpor 100.0 2.7E-35 6E-40 348.0 18.9 214 851-1093 317-539 (559)
271 PRK13646 cbiO cobalt transport 100.0 2E-34 4.3E-39 332.5 25.7 205 184-432 20-234 (286)
272 COG4175 ProV ABC-type proline/ 100.0 2.1E-35 4.5E-40 321.0 16.4 202 881-1094 42-251 (386)
273 PRK15079 oligopeptide ABC tran 100.0 1.7E-34 3.6E-39 337.7 25.3 209 183-432 33-250 (331)
274 PRK09473 oppD oligopeptide tra 100.0 1.8E-34 3.8E-39 337.7 25.4 225 854-1093 12-247 (330)
275 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2E-34 4.3E-39 323.9 24.9 206 184-433 14-221 (236)
276 PRK13549 xylose transporter AT 100.0 9.3E-35 2E-39 362.0 24.5 221 854-1094 5-229 (506)
277 TIGR01277 thiQ thiamine ABC tr 100.0 1.2E-34 2.5E-39 320.6 22.6 198 882-1091 13-212 (213)
278 COG1245 Predicted ATPase, RNas 100.0 5.5E-34 1.2E-38 321.7 28.1 173 883-1081 357-530 (591)
279 TIGR03608 L_ocin_972_ABC putat 100.0 8E-35 1.7E-39 320.4 21.1 189 880-1080 11-206 (206)
280 PRK14235 phosphate transporter 100.0 2E-34 4.4E-39 329.5 25.1 216 854-1092 19-246 (267)
281 cd03232 ABC_PDR_domain2 The pl 100.0 1.3E-34 2.8E-39 314.6 22.2 190 854-1090 3-192 (192)
282 COG4175 ProV ABC-type proline/ 100.0 4.1E-35 9E-40 318.7 18.1 222 183-455 40-268 (386)
283 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 8.9E-35 1.9E-39 377.0 24.7 206 184-433 492-700 (710)
284 PRK14256 phosphate ABC transpo 100.0 3E-34 6.4E-39 325.8 25.9 220 854-1092 4-231 (252)
285 PRK13633 cobalt transporter AT 100.0 1.3E-34 2.9E-39 333.0 23.4 220 854-1093 4-229 (280)
286 PRK11176 lipid transporter ATP 100.0 1.6E-34 3.4E-39 367.1 26.3 209 184-433 356-567 (582)
287 PRK13547 hmuV hemin importer A 100.0 1.2E-34 2.7E-39 330.8 22.8 207 880-1093 14-240 (272)
288 PRK13648 cbiO cobalt transport 100.0 1.8E-34 3.8E-39 330.5 24.1 216 854-1093 7-227 (269)
289 PRK09493 glnQ glutamine ABC tr 100.0 2.4E-34 5.2E-39 324.2 24.7 205 184-432 14-224 (240)
290 TIGR00958 3a01208 Conjugate Tr 100.0 1.5E-34 3.2E-39 372.9 26.2 206 184-433 494-702 (711)
291 cd03233 ABC_PDR_domain1 The pl 100.0 2.6E-34 5.6E-39 314.8 24.2 183 182-426 18-202 (202)
292 TIGR03375 type_I_sec_LssB type 100.0 1.5E-34 3.3E-39 373.5 26.2 208 184-433 478-688 (694)
293 PRK14237 phosphate transporter 100.0 3.1E-34 6.8E-39 327.9 25.7 224 849-1092 15-246 (267)
294 PRK13640 cbiO cobalt transport 100.0 1.7E-34 3.8E-39 332.2 23.8 217 854-1092 5-227 (282)
295 PRK13645 cbiO cobalt transport 100.0 1.6E-34 3.5E-39 334.1 23.5 219 854-1092 6-235 (289)
296 TIGR00968 3a0106s01 sulfate AB 100.0 2.1E-34 4.5E-39 323.8 23.6 201 880-1092 13-215 (237)
297 PRK10771 thiQ thiamine transpo 100.0 1.4E-34 2.9E-39 324.4 22.0 196 885-1092 17-214 (232)
298 PRK13631 cbiO cobalt transport 100.0 1.8E-34 4E-39 336.1 23.9 216 184-444 39-279 (320)
299 PRK14259 phosphate ABC transpo 100.0 2E-34 4.2E-39 329.7 23.6 215 853-1092 12-248 (269)
300 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.8E-33 3.9E-38 363.1 35.5 209 853-1092 450-668 (686)
301 cd03267 ABC_NatA_like Similar 100.0 3.1E-34 6.7E-39 322.0 24.7 202 182-426 32-236 (236)
302 PRK14250 phosphate ABC transpo 100.0 1.6E-34 3.4E-39 325.6 22.3 208 855-1092 4-216 (241)
303 PRK11264 putative amino-acid A 100.0 2.3E-34 4.9E-39 326.5 23.8 205 184-432 16-232 (250)
304 PRK10790 putative multidrug tr 100.0 2.6E-34 5.7E-39 365.3 27.1 206 185-433 355-563 (592)
305 PRK15093 antimicrobial peptide 100.0 2.8E-34 6.1E-39 336.9 25.2 222 855-1092 4-243 (330)
306 cd03292 ABC_FtsE_transporter F 100.0 1.1E-34 2.5E-39 321.1 20.7 195 184-422 14-214 (214)
307 cd03299 ABC_ModC_like Archeal 100.0 2.6E-34 5.7E-39 322.5 23.8 199 882-1092 14-214 (235)
308 KOG0062 ATPase component of AB 100.0 2.1E-34 4.6E-39 330.8 23.4 204 851-1091 359-563 (582)
309 PRK14269 phosphate ABC transpo 100.0 1.8E-34 3.8E-39 326.3 22.5 215 855-1092 3-225 (246)
310 PRK13636 cbiO cobalt transport 100.0 1.6E-34 3.4E-39 332.8 22.4 207 184-433 19-231 (283)
311 TIGR01193 bacteriocin_ABC ABC- 100.0 1.7E-34 3.7E-39 373.9 25.5 208 184-433 487-697 (708)
312 TIGR02142 modC_ABC molybdenum 100.0 1.5E-34 3.3E-39 342.4 22.6 194 885-1092 15-216 (354)
313 cd03297 ABC_ModC_molybdenum_tr 100.0 1.9E-34 4E-39 319.3 21.8 195 879-1090 12-214 (214)
314 PRK11160 cysteine/glutathione 100.0 3E-34 6.6E-39 362.1 26.7 207 184-433 353-562 (574)
315 COG4987 CydC ABC-type transpor 100.0 6.2E-35 1.4E-39 338.6 18.6 209 183-433 350-561 (573)
316 cd03257 ABC_NikE_OppD_transpor 100.0 2.4E-34 5.3E-39 321.7 22.9 201 185-426 19-228 (228)
317 PRK13632 cbiO cobalt transport 100.0 5.3E-34 1.1E-38 326.7 25.9 205 184-432 22-230 (271)
318 PRK09473 oppD oligopeptide tra 100.0 8.8E-34 1.9E-38 331.8 28.1 214 184-433 29-251 (330)
319 TIGR02673 FtsE cell division A 100.0 1.5E-34 3.1E-39 320.3 20.4 194 184-421 15-214 (214)
320 PRK13651 cobalt transporter AT 100.0 2.2E-34 4.8E-39 333.6 22.9 205 184-432 20-253 (305)
321 PRK10895 lipopolysaccharide AB 100.0 4E-34 8.6E-39 322.6 24.1 206 184-432 16-225 (241)
322 PRK13652 cbiO cobalt transport 100.0 2.6E-34 5.6E-39 330.2 22.9 205 185-432 18-226 (277)
323 PRK15112 antimicrobial peptide 100.0 2.8E-34 6.1E-39 328.2 23.0 223 855-1092 5-234 (267)
324 TIGR02770 nickel_nikD nickel i 100.0 2.5E-34 5.4E-39 321.7 22.0 201 882-1092 1-210 (230)
325 TIGR03410 urea_trans_UrtE urea 100.0 3.1E-34 6.7E-39 321.2 22.7 202 184-431 13-219 (230)
326 PRK11144 modC molybdate transp 100.0 1.9E-34 4E-39 341.1 21.9 191 885-1093 16-214 (352)
327 PRK11144 modC molybdate transp 100.0 2.8E-34 6E-39 339.7 23.4 195 189-432 16-217 (352)
328 PRK14274 phosphate ABC transpo 100.0 4.9E-34 1.1E-38 325.2 24.6 215 854-1092 12-238 (259)
329 PRK14270 phosphate ABC transpo 100.0 4.9E-34 1.1E-38 323.8 24.4 215 854-1092 4-230 (251)
330 PRK14239 phosphate transporter 100.0 5.1E-34 1.1E-38 324.0 24.5 215 854-1092 5-231 (252)
331 PRK13648 cbiO cobalt transport 100.0 1.1E-33 2.4E-38 323.8 27.5 204 185-432 23-230 (269)
332 PRK13642 cbiO cobalt transport 100.0 4.2E-34 9E-39 328.5 24.0 216 854-1092 4-224 (277)
333 PRK11022 dppD dipeptide transp 100.0 8.7E-34 1.9E-38 331.7 26.9 211 184-433 20-243 (326)
334 PRK11247 ssuB aliphatic sulfon 100.0 3.6E-34 7.9E-39 324.3 22.9 194 185-429 26-219 (257)
335 PRK11248 tauB taurine transpor 100.0 4.8E-34 1E-38 323.8 23.8 201 184-429 14-216 (255)
336 TIGR02211 LolD_lipo_ex lipopro 100.0 3.7E-34 8E-39 318.6 22.5 196 184-423 18-220 (221)
337 COG0444 DppD ABC-type dipeptid 100.0 4.9E-34 1.1E-38 317.5 23.3 225 855-1093 2-239 (316)
338 KOG0057 Mitochondrial Fe/S clu 100.0 8.4E-35 1.8E-39 337.6 17.7 212 851-1092 348-569 (591)
339 PRK14260 phosphate ABC transpo 100.0 5.8E-34 1.2E-38 324.5 24.4 216 854-1092 7-238 (259)
340 PRK13644 cbiO cobalt transport 100.0 2.8E-34 6E-39 329.2 21.9 204 184-432 15-223 (274)
341 PRK14240 phosphate transporter 100.0 6.7E-34 1.4E-38 322.6 24.7 215 854-1092 3-229 (250)
342 PRK10762 D-ribose transporter 100.0 3.2E-34 7E-39 356.7 24.2 219 855-1095 5-228 (501)
343 cd03213 ABCG_EPDR ABCG transpo 100.0 5.5E-34 1.2E-38 310.1 22.8 190 854-1090 3-194 (194)
344 PRK14257 phosphate ABC transpo 100.0 7.2E-34 1.6E-38 332.1 25.1 220 854-1092 80-308 (329)
345 TIGR03005 ectoine_ehuA ectoine 100.0 7.3E-34 1.6E-38 322.6 24.4 206 184-432 13-235 (252)
346 PRK11614 livF leucine/isoleuci 100.0 4.4E-34 9.6E-39 321.4 22.4 203 184-432 18-225 (237)
347 TIGR02142 modC_ABC molybdenum 100.0 6E-34 1.3E-38 337.3 24.7 199 189-432 15-220 (354)
348 PRK14244 phosphate ABC transpo 100.0 4.3E-34 9.4E-39 324.2 22.5 207 880-1092 18-232 (251)
349 PRK10908 cell division protein 100.0 3.4E-34 7.3E-39 319.1 21.2 196 184-423 15-216 (222)
350 TIGR00972 3a0107s01c2 phosphat 100.0 7.2E-34 1.6E-38 321.6 24.2 206 185-432 15-231 (247)
351 PRK14262 phosphate ABC transpo 100.0 7.9E-34 1.7E-38 322.0 24.6 214 855-1092 4-229 (250)
352 PTZ00265 multidrug resistance 100.0 2.4E-34 5.3E-39 390.1 24.2 213 184-433 1181-1452(1466)
353 TIGR02982 heterocyst_DevA ABC 100.0 7E-34 1.5E-38 316.0 23.6 211 855-1086 2-219 (220)
354 PRK14273 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 321.5 25.7 206 185-432 21-237 (254)
355 PRK14253 phosphate ABC transpo 100.0 8E-34 1.7E-38 321.8 24.5 215 854-1092 3-228 (249)
356 TIGR02769 nickel_nikE nickel i 100.0 5.6E-34 1.2E-38 325.6 23.4 208 183-432 23-239 (265)
357 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 5.4E-34 1.2E-38 317.3 22.7 195 875-1090 30-224 (224)
358 PRK13548 hmuV hemin importer A 100.0 6.7E-34 1.5E-38 323.5 23.9 206 184-432 15-229 (258)
359 PRK11308 dppF dipeptide transp 100.0 9.5E-34 2.1E-38 331.1 25.6 208 184-433 28-244 (327)
360 TIGR00630 uvra excinuclease AB 100.0 1.1E-32 2.4E-37 353.5 37.8 123 954-1092 789-920 (924)
361 TIGR01184 ntrCD nitrate transp 100.0 5.3E-34 1.1E-38 318.9 22.4 202 187-431 1-202 (230)
362 PRK10418 nikD nickel transport 100.0 8.5E-34 1.9E-38 322.2 24.4 214 853-1092 3-225 (254)
363 TIGR02770 nickel_nikD nickel i 100.0 5.2E-34 1.1E-38 319.2 22.3 204 186-432 1-214 (230)
364 PRK13641 cbiO cobalt transport 100.0 5E-34 1.1E-38 329.3 22.6 205 184-432 20-233 (287)
365 PRK11701 phnK phosphonate C-P 100.0 8.1E-34 1.7E-38 323.3 23.9 215 854-1092 6-236 (258)
366 PRK09700 D-allose transporter 100.0 4.3E-34 9.3E-39 356.6 23.7 219 854-1094 5-231 (510)
367 PRK14236 phosphate transporter 100.0 1.3E-33 2.7E-38 323.8 25.6 216 853-1092 24-251 (272)
368 cd03264 ABC_drug_resistance_li 100.0 4.2E-34 9E-39 315.9 20.9 197 184-426 13-211 (211)
369 PRK14258 phosphate ABC transpo 100.0 1E-33 2.2E-38 322.7 24.7 221 854-1092 7-240 (261)
370 PRK14272 phosphate ABC transpo 100.0 1.2E-33 2.5E-38 321.1 25.0 216 854-1092 4-231 (252)
371 PRK13640 cbiO cobalt transport 100.0 1.8E-33 4E-38 323.8 26.9 208 185-433 21-232 (282)
372 PRK14271 phosphate ABC transpo 100.0 1.2E-33 2.6E-38 324.0 25.3 219 854-1092 21-246 (276)
373 TIGR03740 galliderm_ABC gallid 100.0 9.5E-34 2.1E-38 315.7 23.7 198 184-430 13-210 (223)
374 PRK11300 livG leucine/isoleuci 100.0 1E-33 2.2E-38 322.1 24.5 221 184-432 18-242 (255)
375 PRK13633 cobalt transporter AT 100.0 8.2E-34 1.8E-38 326.5 23.8 206 184-433 23-233 (280)
376 TIGR03411 urea_trans_UrtD urea 100.0 1.2E-33 2.5E-38 319.0 24.6 212 184-432 15-230 (242)
377 PRK13639 cbiO cobalt transport 100.0 9E-34 1.9E-38 325.3 23.7 205 184-432 15-225 (275)
378 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.4E-33 1.4E-37 359.6 34.6 210 853-1092 476-695 (710)
379 cd03300 ABC_PotA_N PotA is an 100.0 1.2E-33 2.6E-38 316.6 24.1 206 184-432 13-219 (232)
380 PRK13538 cytochrome c biogenes 100.0 5.3E-34 1.2E-38 313.1 20.7 187 880-1080 14-202 (204)
381 PRK14242 phosphate transporter 100.0 1.7E-33 3.7E-38 319.9 25.5 206 185-432 20-236 (253)
382 PRK13543 cytochrome c biogenes 100.0 7.1E-34 1.5E-38 314.4 21.7 201 854-1081 11-211 (214)
383 PRK10619 histidine/lysine/argi 100.0 8.9E-34 1.9E-38 322.7 22.9 205 184-432 18-240 (257)
384 PRK14248 phosphate ABC transpo 100.0 1.2E-33 2.6E-38 323.6 24.0 215 854-1092 21-247 (268)
385 PRK14250 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 318.7 23.3 200 185-432 17-220 (241)
386 cd03299 ABC_ModC_like Archeal 100.0 1.4E-33 3.1E-38 316.6 24.1 204 186-432 14-218 (235)
387 PRK11174 cysteine/glutathione 100.0 2.1E-34 4.5E-39 366.2 19.6 210 853-1092 348-567 (588)
388 TIGR01193 bacteriocin_ABC ABC- 100.0 9.9E-33 2.1E-37 357.5 35.4 211 853-1092 472-692 (708)
389 PRK14261 phosphate ABC transpo 100.0 1.4E-33 3.1E-38 320.3 24.3 215 854-1092 6-232 (253)
390 PRK15056 manganese/iron transp 100.0 8.4E-34 1.8E-38 325.2 22.5 219 854-1094 6-227 (272)
391 PRK14275 phosphate ABC transpo 100.0 1.4E-33 3E-38 325.2 24.5 215 854-1092 39-265 (286)
392 PRK14251 phosphate ABC transpo 100.0 1.5E-33 3.3E-38 319.8 24.4 215 854-1092 4-230 (251)
393 PRK14268 phosphate ABC transpo 100.0 1.2E-33 2.5E-38 321.8 23.4 206 184-432 25-241 (258)
394 PRK13649 cbiO cobalt transport 100.0 1.3E-33 2.8E-38 325.4 24.0 204 184-432 20-233 (280)
395 cd03298 ABC_ThiQ_thiamine_tran 100.0 9.6E-34 2.1E-38 313.0 22.0 195 189-426 16-211 (211)
396 PRK14249 phosphate ABC transpo 100.0 1.7E-33 3.7E-38 319.4 24.5 219 854-1092 4-230 (251)
397 PRK14257 phosphate ABC transpo 100.0 2.9E-33 6.3E-38 327.0 27.1 211 184-432 95-312 (329)
398 PRK14254 phosphate ABC transpo 100.0 1.6E-33 3.5E-38 324.3 24.5 214 854-1092 39-264 (285)
399 cd03231 ABC_CcmA_heme_exporter 100.0 6.1E-34 1.3E-38 311.8 20.0 184 880-1080 13-198 (201)
400 PRK10584 putative ABC transpor 100.0 1.3E-33 2.9E-38 315.6 23.2 197 185-425 24-227 (228)
401 PRK14263 phosphate ABC transpo 100.0 2E-33 4.2E-38 319.9 24.9 206 879-1092 20-240 (261)
402 PRK11124 artP arginine transpo 100.0 8E-34 1.7E-38 320.3 21.5 204 184-431 15-228 (242)
403 PRK14247 phosphate ABC transpo 100.0 1.9E-33 4.2E-38 318.8 24.6 209 184-432 16-233 (250)
404 TIGR02633 xylG D-xylose ABC tr 100.0 1.1E-33 2.4E-38 352.3 24.8 220 855-1094 2-227 (500)
405 cd03225 ABC_cobalt_CbiO_domain 100.0 7.9E-34 1.7E-38 313.7 20.9 194 184-421 14-211 (211)
406 PRK10575 iron-hydroxamate tran 100.0 9.9E-34 2.1E-38 323.6 22.4 210 184-432 24-236 (265)
407 TIGR01166 cbiO cobalt transpor 100.0 6.4E-34 1.4E-38 309.0 19.6 178 880-1067 5-188 (190)
408 PRK13642 cbiO cobalt transport 100.0 3.2E-33 7E-38 321.1 26.5 205 184-432 20-228 (277)
409 PRK15112 antimicrobial peptide 100.0 1.7E-33 3.7E-38 321.8 24.1 207 184-432 26-238 (267)
410 PRK10419 nikE nickel transport 100.0 1.6E-33 3.5E-38 322.0 23.8 224 855-1093 4-237 (268)
411 PRK15439 autoinducer 2 ABC tra 100.0 8.9E-34 1.9E-38 353.0 23.5 212 854-1094 11-226 (510)
412 PRK10253 iron-enterobactin tra 100.0 1.1E-33 2.5E-38 323.1 22.3 210 184-432 20-232 (265)
413 cd03235 ABC_Metallic_Cations A 100.0 6.1E-34 1.3E-38 315.0 19.3 200 184-426 12-213 (213)
414 PRK14267 phosphate ABC transpo 100.0 1.9E-33 4.2E-38 319.4 23.9 209 184-432 17-236 (253)
415 COG4598 HisP ABC-type histidin 100.0 1.9E-34 4.1E-39 288.8 13.6 207 876-1093 15-237 (256)
416 PRK09984 phosphonate/organopho 100.0 1.5E-33 3.2E-38 321.9 22.9 216 184-431 17-240 (262)
417 TIGR00968 3a0106s01 sulfate AB 100.0 2.2E-33 4.7E-38 315.5 23.9 206 184-432 13-219 (237)
418 PRK13657 cyclic beta-1,2-gluca 100.0 2E-33 4.2E-38 356.9 26.5 207 185-433 349-558 (588)
419 PRK14255 phosphate ABC transpo 100.0 3E-33 6.6E-38 317.6 25.2 215 854-1092 5-231 (252)
420 PRK13638 cbiO cobalt transport 100.0 2.1E-33 4.6E-38 321.9 24.2 205 184-432 14-224 (271)
421 PRK15093 antimicrobial peptide 100.0 3.9E-33 8.5E-38 327.3 26.7 214 184-432 20-247 (330)
422 PRK10418 nikD nickel transport 100.0 4.2E-33 9.2E-38 316.5 26.1 206 185-432 17-229 (254)
423 COG4525 TauB ABC-type taurine 100.0 1.2E-33 2.7E-38 287.2 19.2 204 184-432 18-223 (259)
424 PRK10771 thiQ thiamine transpo 100.0 2.2E-33 4.7E-38 314.7 23.4 201 189-432 17-218 (232)
425 PRK14265 phosphate ABC transpo 100.0 2.6E-33 5.6E-38 321.2 24.5 215 853-1092 19-253 (274)
426 PRK14274 phosphate ABC transpo 100.0 4.6E-33 9.9E-38 317.3 26.3 206 185-432 26-242 (259)
427 TIGR01978 sufC FeS assembly AT 100.0 2.9E-33 6.3E-38 316.1 24.5 213 184-432 13-233 (243)
428 PRK10247 putative ABC transpor 100.0 1.3E-33 2.8E-38 314.8 21.3 209 854-1090 7-220 (225)
429 PRK11288 araG L-arabinose tran 100.0 1.5E-33 3.2E-38 350.8 24.1 216 854-1091 4-223 (501)
430 PRK03695 vitamin B12-transport 100.0 1.8E-33 3.9E-38 318.1 22.6 198 882-1093 11-218 (248)
431 PRK11231 fecE iron-dicitrate t 100.0 1.6E-33 3.4E-38 320.3 22.3 209 184-432 15-226 (255)
432 PRK10744 pstB phosphate transp 100.0 4.3E-33 9.4E-38 317.5 25.9 206 185-432 27-243 (260)
433 COG0444 DppD ABC-type dipeptid 100.0 2.6E-33 5.6E-38 311.7 23.3 215 183-432 17-242 (316)
434 PRK10982 galactose/methyl gala 100.0 1.1E-33 2.4E-38 351.3 22.8 207 879-1094 10-220 (491)
435 COG4148 ModC ABC-type molybdat 100.0 2.4E-34 5.1E-39 307.6 14.3 197 188-433 15-218 (352)
436 TIGR01842 type_I_sec_PrtD type 100.0 3.9E-33 8.6E-38 350.6 27.8 209 184-433 331-542 (544)
437 cd03252 ABCC_Hemolysin The ABC 100.0 5.6E-34 1.2E-38 320.6 18.0 196 880-1092 15-220 (237)
438 PRK14238 phosphate transporter 100.0 2.7E-33 5.9E-38 320.7 23.9 215 854-1092 24-250 (271)
439 PRK13645 cbiO cobalt transport 100.0 1.7E-33 3.6E-38 325.7 22.3 206 184-432 24-239 (289)
440 TIGR01846 type_I_sec_HlyB type 100.0 2.3E-33 5E-38 362.3 26.0 208 184-433 470-680 (694)
441 CHL00131 ycf16 sulfate ABC tra 100.0 4.1E-33 8.9E-38 316.6 24.9 221 854-1093 7-237 (252)
442 cd03262 ABC_HisP_GlnQ_permease 100.0 1.1E-33 2.3E-38 313.1 19.6 195 184-422 13-213 (213)
443 TIGR03873 F420-0_ABC_ATP propo 100.0 2.6E-33 5.7E-38 318.7 23.2 209 184-432 14-225 (256)
444 KOG0066 eIF2-interacting prote 100.0 1E-32 2.2E-37 307.0 27.0 204 851-1094 583-788 (807)
445 PRK14235 phosphate transporter 100.0 4E-33 8.7E-38 318.8 24.5 207 185-432 33-250 (267)
446 TIGR01277 thiQ thiamine ABC tr 100.0 3.6E-33 7.8E-38 308.7 23.1 199 186-427 13-212 (213)
447 COG4604 CeuD ABC-type enteroch 100.0 1.4E-34 3E-39 294.9 10.8 209 876-1094 10-222 (252)
448 PRK14243 phosphate transporter 100.0 3.3E-33 7.2E-38 318.9 23.5 214 854-1092 10-243 (264)
449 TIGR02323 CP_lyasePhnK phospho 100.0 3.7E-33 8E-38 317.1 23.5 214 855-1092 4-233 (253)
450 TIGR02203 MsbA_lipidA lipid A 100.0 3.3E-33 7.2E-38 354.5 25.6 209 184-433 345-556 (571)
451 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.2E-33 2.5E-38 322.2 19.1 211 854-1093 2-221 (275)
452 PRK14269 phosphate ABC transpo 100.0 5.9E-33 1.3E-37 313.9 24.7 208 184-432 15-229 (246)
453 PRK10789 putative multidrug tr 100.0 4.4E-33 9.6E-38 351.5 26.4 208 184-433 328-538 (569)
454 PRK13539 cytochrome c biogenes 100.0 1.9E-33 4.1E-38 309.4 19.8 185 880-1081 15-199 (207)
455 COG1132 MdlB ABC-type multidru 100.0 5.7E-34 1.2E-38 360.2 18.0 212 852-1092 326-547 (567)
456 PRK14241 phosphate transporter 100.0 5.6E-33 1.2E-37 316.3 24.3 208 184-432 17-241 (258)
457 PRK14270 phosphate ABC transpo 100.0 6.7E-33 1.5E-37 314.5 24.7 207 184-432 17-234 (251)
458 PRK13546 teichoic acids export 100.0 7.3E-33 1.6E-37 314.6 24.9 195 878-1094 35-229 (264)
459 cd03230 ABC_DR_subfamily_A Thi 100.0 2.4E-33 5.2E-38 299.6 19.8 157 880-1083 13-171 (173)
460 PRK14256 phosphate ABC transpo 100.0 8E-33 1.7E-37 314.0 25.2 208 184-432 17-235 (252)
461 PRK14237 phosphate transporter 100.0 1.3E-32 2.8E-37 314.5 27.0 207 184-432 33-250 (267)
462 PRK14266 phosphate ABC transpo 100.0 5.8E-33 1.2E-37 314.9 23.8 218 855-1092 4-229 (250)
463 TIGR01846 type_I_sec_HlyB type 100.0 5.8E-32 1.3E-36 349.3 36.1 213 852-1092 453-675 (694)
464 cd03251 ABCC_MsbA MsbA is an e 100.0 9.8E-34 2.1E-38 318.1 17.1 195 881-1092 16-220 (234)
465 PRK14259 phosphate ABC transpo 100.0 6.2E-33 1.3E-37 317.4 23.9 206 184-433 26-253 (269)
466 PRK14246 phosphate ABC transpo 100.0 6E-33 1.3E-37 315.2 23.5 215 855-1092 11-236 (257)
467 cd03297 ABC_ModC_molybdenum_tr 100.0 4.9E-33 1.1E-37 308.0 22.2 192 189-426 16-214 (214)
468 PRK14248 phosphate ABC transpo 100.0 2E-32 4.2E-37 313.5 27.9 207 184-432 34-251 (268)
469 PRK11701 phnK phosphonate C-P 100.0 7.6E-33 1.7E-37 315.2 24.4 207 184-432 19-240 (258)
470 PRK14245 phosphate ABC transpo 100.0 6.9E-33 1.5E-37 314.2 23.7 206 184-432 16-233 (250)
471 cd03245 ABCC_bacteriocin_expor 100.0 1.9E-33 4.1E-38 312.8 18.7 195 880-1090 17-220 (220)
472 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.2E-33 2.5E-38 318.2 17.1 196 880-1092 16-221 (238)
473 TIGR01189 ccmA heme ABC export 100.0 3.1E-33 6.8E-38 305.6 19.8 182 880-1078 13-196 (198)
474 PRK09580 sufC cysteine desulfu 100.0 8.3E-33 1.8E-37 313.4 23.9 219 855-1092 2-230 (248)
475 PRK13545 tagH teichoic acids e 100.0 6.7E-33 1.4E-37 331.2 24.0 193 880-1094 37-229 (549)
476 PRK14239 phosphate transporter 100.0 1E-32 2.2E-37 313.4 24.5 206 185-432 19-235 (252)
477 TIGR01192 chvA glucan exporter 100.0 9.2E-33 2E-37 349.2 26.7 207 185-433 349-558 (585)
478 cd03213 ABCG_EPDR ABCG transpo 100.0 8.9E-33 1.9E-37 300.6 22.9 171 184-426 22-194 (194)
479 TIGR02982 heterocyst_DevA ABC 100.0 1.5E-32 3.3E-37 305.3 25.1 196 184-422 18-219 (220)
480 PRK14252 phosphate ABC transpo 100.0 1.2E-32 2.6E-37 314.8 24.9 216 853-1092 15-244 (265)
481 PRK11176 lipid transporter ATP 100.0 1.4E-33 3E-38 358.4 18.9 213 853-1092 340-562 (582)
482 PRK10790 putative multidrug tr 100.0 1.9E-33 4E-38 357.6 19.8 210 853-1092 339-558 (592)
483 cd03254 ABCC_Glucan_exporter_l 100.0 1.9E-33 4.2E-38 314.6 17.6 211 854-1092 2-221 (229)
484 TIGR02324 CP_lyasePhnL phospho 100.0 8.1E-33 1.8E-37 308.5 22.4 191 880-1081 21-223 (224)
485 PRK11160 cysteine/glutathione 100.0 1.7E-33 3.6E-38 355.4 18.9 212 853-1092 337-557 (574)
486 PRK13547 hmuV hemin importer A 100.0 7.8E-33 1.7E-37 316.0 22.5 213 184-432 14-243 (272)
487 PRK14244 phosphate ABC transpo 100.0 1.1E-32 2.4E-37 312.8 23.5 212 184-432 18-236 (251)
488 cd03229 ABC_Class3 This class 100.0 4E-33 8.6E-38 299.4 18.7 158 880-1082 13-176 (178)
489 TIGR02204 MsbA_rel ABC transpo 100.0 9.6E-33 2.1E-37 350.5 25.4 208 184-433 353-563 (576)
490 COG4987 CydC ABC-type transpor 100.0 9.2E-34 2E-38 328.9 14.6 212 854-1093 336-557 (573)
491 PRK10419 nikE nickel transport 100.0 7.3E-33 1.6E-37 316.6 21.9 207 184-432 25-240 (268)
492 PRK14240 phosphate transporter 100.0 1.7E-32 3.7E-37 311.1 24.7 206 185-432 17-233 (250)
493 PRK14262 phosphate ABC transpo 100.0 1.4E-32 3E-37 311.8 23.9 207 184-432 16-233 (250)
494 COG1129 MglA ABC-type sugar tr 100.0 6E-33 1.3E-37 328.3 21.5 218 877-1103 18-242 (500)
495 PRK14264 phosphate ABC transpo 100.0 8.5E-33 1.8E-37 321.4 22.5 222 854-1092 45-284 (305)
496 PRK14272 phosphate ABC transpo 100.0 1.9E-32 4.2E-37 311.1 24.9 208 184-432 17-235 (252)
497 cd03252 ABCC_Hemolysin The ABC 100.0 9.5E-33 2.1E-37 310.7 22.1 206 184-433 15-225 (237)
498 COG1123 ATPase components of v 100.0 1.2E-32 2.7E-37 327.5 24.1 224 854-1093 5-240 (539)
499 PRK14275 phosphate ABC transpo 100.0 5.4E-33 1.2E-37 320.4 20.4 207 184-432 52-269 (286)
500 TIGR03269 met_CoM_red_A2 methy 100.0 9.8E-33 2.1E-37 345.2 24.3 203 880-1092 13-253 (520)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.1e-242 Score=2226.52 Aligned_cols=1268 Identities=54% Similarity=0.925 Sum_probs=1190.3
Q ss_pred cCchhhhHHHHHhhCCChhhhhhcccccccccCcccceeeccCCcChhhhHHHHHHHHhhhhhcHHHHHHHHHHHhhhcC
Q 000628 51 QDDEEELRWAAIERLPTYDRLKKGMLNQVLEDGKVVKHEVDVSNLAVQDKKRLLESILKIVEEDNEKFLKRIRHRTDRVG 130 (1383)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (1383)
+||||+|+|||+|||||++| +++.... + .++|+.++++.+++.+.++..+..++|+|+++.++++|++++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~-~-----~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~- 81 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIF-E-----SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV- 81 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhc-c-----CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc-
Confidence 45999999999999999999 5555321 1 259999999999999999999999999999999999999998
Q ss_pred CCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceeeeeeEEEEeCCeEEEEEcCCCCCH
Q 000628 131 IEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGK 210 (1383)
Q Consensus 131 ~~~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 210 (1383)
++|.++++++++.+++++..| ||+.|...+.++..++..+.. ++...+||+|+||.++||+|++++|||||||
T Consensus 82 -~~p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ 154 (1391)
T KOG0065|consen 82 -ELPTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGK 154 (1391)
T ss_pred -cCCceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCch
Confidence 899999999999999998876 999999999999887766654 5566889999999999999999999999999
Q ss_pred HHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHH
Q 000628 211 TTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREK 290 (1383)
Q Consensus 211 STLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~ 290 (1383)
||||++|+|.++..+...|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.|++ +..|+|+
T Consensus 155 ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~ 231 (1391)
T KOG0065|consen 155 TTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREK 231 (1391)
T ss_pred HHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHH
Confidence 9999999999998877789999999999999999999999999999999999999999999999999886 5666665
Q ss_pred hcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCC
Q 000628 291 QAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEIS 370 (1383)
Q Consensus 291 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEpt 370 (1383)
++ ..+|++++++||++|+||+|||++.||+||||||||+||+++++++++++|||+|
T Consensus 232 ~~-----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t 288 (1391)
T KOG0065|consen 232 LA-----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEIT 288 (1391)
T ss_pred HH-----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccc
Confidence 32 1589999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhH
Q 000628 371 TGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVAD 450 (1383)
Q Consensus 371 sgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~ad 450 (1383)
+|||++|+.+++++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||+||+++++||
T Consensus 289 ~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~AD 368 (1391)
T KOG0065|consen 289 RGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTAD 368 (1391)
T ss_pred ccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcCCCCcccCCCCccccCccCCcHHHHHHHHHHH
Q 000628 451 FLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAR 530 (1383)
Q Consensus 451 fl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 530 (1383)
|+++++++++++++|..+..|+.+.+++||.+.|..++.++++..+++.++++++.++.++..++|..+.|+|+++|+.|
T Consensus 369 fLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R 448 (1391)
T KOG0065|consen 369 FLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIR 448 (1391)
T ss_pred HHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhcc
Q 000628 531 EWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRD 610 (1383)
Q Consensus 531 ~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~ 610 (1383)
+|++++||.+++++++++.+++++++|++|+++++ .+..++..+.|++||++++.+|++++|+.++++++|||+|||+
T Consensus 449 ~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~ 526 (1391)
T KOG0065|consen 449 EFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRD 526 (1391)
T ss_pred HHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhc
Confidence 99999999999999999999999999999999985 5566788899999999999999999999999999999999999
Q ss_pred CcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Q 000628 611 HLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLG 690 (1383)
Q Consensus 611 ~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~ 690 (1383)
..|||+|+++++.+++++|++++++++|.+|+||++|+.+++++||.+|+.++++++++.++||+++++++++.+|+++|
T Consensus 527 ~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g 606 (1391)
T KOG0065|consen 527 LSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIG 606 (1391)
T ss_pred ccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCccccCCCCCCC------------ccccccchh
Q 000628 691 TFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSI------------NQPTIGKVL 758 (1383)
Q Consensus 691 ~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~------------~~~~~G~~~ 758 (1383)
++.++++.+++||+|+..+||+||+|++|++|++|+++++++|||++++|+|.+.+|.+ ...+.|..+
T Consensus 607 ~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~ 686 (1391)
T KOG0065|consen 607 GILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDY 686 (1391)
T ss_pred HHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceE
Confidence 99999999999999999999999999999999999999999999999999998433321 245788999
Q ss_pred hcccCcc-----ccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchhhhccCccccchhhhhccccc
Q 000628 759 LKIRGFS-----TESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGHEAEGMQMAVRSSSK 833 (1383)
Q Consensus 759 l~~~~~~-----~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (1383)
+..+++. ...+|+|+++|+++||.++|++++++++.|+++....+..+..+..+........ . ...+..
T Consensus 687 v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~-~---~~~~~~-- 760 (1391)
T KOG0065|consen 687 VSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSA-G---SSSEIE-- 760 (1391)
T ss_pred EecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhc-c---cccccc--
Confidence 9999888 7889999999999999999999999999999999988888776655443221100 0 000000
Q ss_pred ccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhh
Q 000628 834 TVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVL 913 (1383)
Q Consensus 834 ~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L 913 (1383)
......+.++++++.|+.+..++++||.|.+++|.+++..| +++++|+|||+.++||.++||||+||||||||||+|
T Consensus 761 ~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvL 837 (1391)
T KOG0065|consen 761 KLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVL 837 (1391)
T ss_pred ccccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHH
Confidence 00111111456788899999999999999999998887766 678999999999999999999999999999999999
Q ss_pred cCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc
Q 000628 914 AGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS 993 (1383)
Q Consensus 914 ~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~ 993 (1383)
+||++.|.++|+|.|||+|++++.++|.+|||+|+|.|.|.+||+|.|.|+|+||++.+++.+++.++|+++++.++|++
T Consensus 838 A~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~ 917 (1391)
T KOG0065|consen 838 AGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKE 917 (1391)
T ss_pred hcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchh
Confidence 99999999999999999999989999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhCC-CCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHH
Q 000628 994 LNDSMVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 1072 (1383)
Q Consensus 994 ~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p-~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~ 1072 (1383)
++|.+||.+| +|||.+|||||+||++|++|| .||||||||||||++++..|++++|+++++|+|||||+||||.++++
T Consensus 918 ~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife 996 (1391)
T KOG0065|consen 918 YADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFE 996 (1391)
T ss_pred hhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHH
Confidence 9999999999 999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hhceEEEEecCcEEEEecCCCcchhHHHHHHHhCCCCcCcccccCcccchhhhccccchhcccccHHHHHhhchHHHHHH
Q 000628 1073 AFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNK 1152 (1383)
Q Consensus 1073 ~~d~~~~l~~gG~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 1152 (1383)
.||++++|++||+++|.||+|++++++++||++++|++ |++..||||||||+++.+.+...+.||+++|++|+++++++
T Consensus 997 ~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 997 AFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred HHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHHHH
Confidence 99999999999999999999999999999999998886 55555999999999999988888899999999999999999
Q ss_pred HHHHhhCCCCCC-CCCCCCCCCCCCchHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhH
Q 000628 1153 ELIKELSTPPPG-SSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDL 1231 (1383)
Q Consensus 1153 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~ 1231 (1383)
+++++++.|+++ ..+..++++|++|+|.|++.|+|||+++|||+|+|+++|++++++.||++|++||+.|+ ++||+
T Consensus 1076 e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~l 1152 (1391)
T KOG0065|consen 1076 ELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGL 1152 (1391)
T ss_pred HHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHH
Confidence 999999999998 88899999999999999999999999999999999999999999999999999999995 78999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccch
Q 000628 1232 QNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWEL 1311 (1383)
Q Consensus 1232 ~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~ 1311 (1383)
+|.+|++|+++++.+.+++...+|.+..||.++||||++|||||.+|++||+++|+||+++++.+|.+|+|+|+||++++
T Consensus 1153 qn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a 1232 (1391)
T KOG0065|consen 1153 QNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTA 1232 (1391)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhH
Confidence 99999999999999999988899999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHccccccCcccccccccccc
Q 000628 1312 GKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVVKLKMNKTE 1377 (1383)
Q Consensus 1312 ~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~ 1377 (1383)
.+|+||+++++++.+|++++|||+++++||.++|+++.+++++++++||||++|++.||+||+|+-
T Consensus 1233 ~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy 1298 (1391)
T KOG0065|consen 1233 SKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMY 1298 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeee
Confidence 999999999999999999999999999999999999999999999999999999999999999863
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.1e-222 Score=2202.83 Aligned_cols=1356 Identities=62% Similarity=1.041 Sum_probs=1211.7
Q ss_pred ccccccccccccccCcccccccccccccccccccccCCCccccCC--------CccCchhhhHHHHHhhCCChhhhhhcc
Q 000628 4 TVADDLARSFSVRGGQSISSGSRRSWASASIREVWNAPDNVFSRS--------ERQDDEEELRWAAIERLPTYDRLKKGM 75 (1383)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (1383)
..|++|+||+| +++++ +.|.. +|+|++. ..|||||+|+|||+||||||+|+|+++
T Consensus 3 ~~~~~~~~~~~----------~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (1470)
T PLN03140 3 SRGGSMRRSIS----------RSVSR------SSRNM-EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSI 65 (1470)
T ss_pred CCcccHHHHHH----------HHhhh------hhhhh-hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhh
Confidence 35677999999 44444 33422 4566331 127899999999999999999999999
Q ss_pred cccc-cccCccc---ceeeccCCcChhhhHHHHHHHHhhhhhcHHHHHHHHHHHhhhcCCCCCccEEEEeeeEEEEEEec
Q 000628 76 LNQV-LEDGKVV---KHEVDVSNLAVQDKKRLLESILKIVEEDNEKFLKRIRHRTDRVGIEIPKIEVRYDHLSVEGDVHV 151 (1383)
Q Consensus 76 ~~~~-~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~v~~~~l~v~~~~~~ 151 (1383)
+.+. +++|... ..++|+.+|+.++++.++++++++.++|+++|++++++|.+++|+++|++||+|+||+|++++++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~ 145 (1470)
T PLN03140 66 MKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYI 145 (1470)
T ss_pred hhcccccccccccccccccccccCChHHHHHHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecC
Confidence 9642 1122111 23599999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCChhHHHHHHHHHHhhhccccCCCcccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEE
Q 000628 152 GTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKI 231 (1383)
Q Consensus 152 ~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I 231 (1383)
+++.+||++|.+.+.++.+....+...+++.+++||+|||+.++|||+++|+||||||||||||+|+|+++++.+++|+|
T Consensus 146 ~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I 225 (1470)
T PLN03140 146 GSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEI 225 (1470)
T ss_pred CcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEE
Confidence 99999999999999998776655543344557889999999999999999999999999999999999998877789999
Q ss_pred EECCeeCCCCCCcceEEEecCCCCCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhc
Q 000628 232 TYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAG 311 (1383)
Q Consensus 232 ~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~ 311 (1383)
+|||+++++..+++.++||+|+|.|++++||+|||.|+++|++.+.++++..++.+++++.++.|+++++.+|++...++
T Consensus 226 ~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~ 305 (1470)
T PLN03140 226 TYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEG 305 (1470)
T ss_pred EECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhc
Confidence 99999998776778899999999999999999999999999987776666667778888888888888889999988888
Q ss_pred cchhhhHHHHHHHcCCcccccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHh
Q 000628 312 QETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHI 391 (1383)
Q Consensus 312 ~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~ 391 (1383)
.+.+..++.+++.+||++|+||.||+++.|||||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++.
T Consensus 306 ~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~ 385 (1470)
T PLN03140 306 VKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHL 385 (1470)
T ss_pred chhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHh
Confidence 87888899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCceEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCC
Q 000628 392 LDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQP 471 (1383)
Q Consensus 392 ~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~ 471 (1383)
.++|+|+++|||+++++++||+|++|++|+++|+||++++.+||+++||+||+++++|||+++++++++++++|.....|
T Consensus 386 ~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p 465 (1470)
T PLN03140 386 TEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKP 465 (1470)
T ss_pred cCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999998888888776778
Q ss_pred CCCCChhHHHHHHHhCccchhHHhhhcCCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 000628 472 YRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTF 551 (1383)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i 551 (1383)
+++.++++|+++|++++.++++.++++.|.++++.++.....++|..++|+|++.|++|+|++++||+..++.++++.++
T Consensus 466 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii 545 (1470)
T PLN03140 466 YRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIII 545 (1470)
T ss_pred cccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 88889999999999999998888887777766655666666678999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccCCcCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHH
Q 000628 552 MSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPIS 631 (1383)
Q Consensus 552 ~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~ 631 (1383)
+|+++|++||+++++..+..++..+.|++||++++.++++++++..++.++|||+|||+.+||++|+|+++.++.++|+.
T Consensus 546 ~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~ 625 (1470)
T PLN03140 546 VAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPIS 625 (1470)
T ss_pred HHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHH
Confidence 99999999999987655555677889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCch
Q 000628 632 ILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIE 711 (1383)
Q Consensus 632 ~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip 711 (1383)
++++++|++++|||+|+++++++||.++++++++++++.++|++++++++++.+|+++++++++++++|+||++++++||
T Consensus 626 ~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip 705 (1470)
T PLN03140 626 IIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIP 705 (1470)
T ss_pred HHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcHHHHHHHHHHHHHhcCCccccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHH
Q 000628 712 PFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIA 791 (1383)
Q Consensus 712 ~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~ 791 (1383)
+||+|++|+||+.|+++++++|||.+.+|.+..+.+ ...+.|+.+|+.+++..++.|+|++++++++++++|++++++
T Consensus 706 ~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~--~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l 783 (1470)
T PLN03140 706 NWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASD--NSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTL 783 (1470)
T ss_pred hHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCC--CCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998886432221 245789999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCceeecccchhhhcc--Cc----c-ccchh---hhh--cccc-------ccc-c-cccccccCcccccc
Q 000628 792 ALAYLNPIGDSNSTVIEEDGEKQRAS--GH----E-AEGMQ---MAV--RSSS-------KTV-G-AAQNVTNRGMILPF 850 (1383)
Q Consensus 792 ~l~~~~~~~~~~~~~~~~~~~~~~~~--~~----~-~~~~~---~~~--~~~~-------~~~-~-~~~~~~~~g~~~~~ 850 (1383)
++++.++..........+..+..... .. . .+... ... +... ... . .......+++.+|+
T Consensus 784 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (1470)
T PLN03140 784 ALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPF 863 (1470)
T ss_pred HHHhcCccCCCCccccccchhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 99999876554443321111100000 00 0 00000 000 0000 000 0 00112335667788
Q ss_pred CCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000628 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1383)
Q Consensus 851 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1383)
.|.+++|+|++|.++.+.+.++.+..++++++|+|||++++|||++||||||||||||||++|+|+.++|.++|+|.+||
T Consensus 864 ~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG 943 (1470)
T PLN03140 864 TPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISG 943 (1470)
T ss_pred CcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECC
Confidence 99999999999999988777666666667789999999999999999999999999999999999987777899999999
Q ss_pred ccCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 931 YPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 931 ~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
.+.....+++.+|||+|+|.+++.+||+|+|.|++.++.+.+.+.+++.+.++++++.++|.+++|+.+|.+++++||||
T Consensus 944 ~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgG 1023 (1470)
T PLN03140 944 FPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTE 1023 (1470)
T ss_pred ccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHH
Confidence 88765566788999999999999999999999999888766666666778899999999999999999998888899999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
|||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||||+|||+.++++.||++++|.+||+++|.|
T Consensus 1024 erkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G 1103 (1470)
T PLN03140 1024 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSG 1103 (1470)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEEC
Confidence 99999999999999999999999999999999999999999998899999999999977889999999998889999999
Q ss_pred CCCcchhHHHHHHHhCCCCcCcccccCcccchhhhccccchhcccccHHHHHhhchHHHHHHHHHHhhCCCCCCCCCCCC
Q 000628 1091 PLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYF 1170 (1383)
Q Consensus 1091 ~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 1170 (1383)
|++++++++++||++++|.++||+++|||||++|+++...+...+.||++.|++|++++++++.+++++.++++.++..+
T Consensus 1104 ~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (1470)
T PLN03140 1104 PLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYF 1183 (1470)
T ss_pred CcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCcccccc
Confidence 99988899999999998887899999999999999887665555679999999999999998888888887777767667
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHHH
Q 000628 1171 PTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNA 1250 (1383)
Q Consensus 1171 ~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~ 1250 (1383)
+++|++++++|++.|+||++++|||||.|+.+|+++++++|+++|++||++|++..+++++++++|++|++++|+++.++
T Consensus 1184 ~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 1263 (1470)
T PLN03140 1184 ATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNC 1263 (1470)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999998877889999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccchhHHHHHHHHHHHHHHHHHH
Q 000628 1251 ISVIPVICVERTVYYRERAAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTL 1330 (1383)
Q Consensus 1251 ~~~~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~ 1330 (1383)
++++|++..||+||+|||++|||++++|++|++++|+||.++++++|++|+|||+||++++.+||||+++++++.+++++
T Consensus 1264 ~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~ 1343 (1470)
T PLN03140 1264 STVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTY 1343 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHccccccCccccccccccccc
Q 000628 1331 YGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVVKLKMNKTEL 1378 (1383)
Q Consensus 1331 ~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~~ 1378 (1383)
+|+++++++||.++|++++++++++|++||||++|+++||+||+|+-|
T Consensus 1344 ~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~ 1391 (1470)
T PLN03140 1344 YGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYW 1391 (1470)
T ss_pred HHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999754
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=6.3e-175 Score=1755.23 Aligned_cols=1216 Identities=32% Similarity=0.539 Sum_probs=1005.3
Q ss_pred hcHHHHHHHHHHHhhhcCCCCC--ccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceeeeee
Q 000628 113 EDNEKFLKRIRHRTDRVGIEIP--KIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDV 190 (1383)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~p--~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 190 (1383)
.|++++++.++++.++.+...| +++|+|+||+|++ ...+...+||+.|.+.+.......... ..+++++++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4667777665555556655555 9999999999999 445666789999998887664332221 12344567899999
Q ss_pred EEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC-CCceeEEEECCeeCCCCC--CcceEEEecCCCCCCCCCCHHHHHH
Q 000628 191 SGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-LRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMTVRETLD 267 (1383)
Q Consensus 191 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lTV~E~l~ 267 (1383)
|+.++|||+++|+||||||||||||+|+|+.++. ...+|+|.+||+++++.. .++.++||+|+|.|++.+||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 9999999999999999999999999999997432 125999999999875432 3456999999999999999999999
Q ss_pred HhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHH
Q 000628 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1383)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1383)
|+++++.+..+.. ...+.++ .+...+.+++.+||++++||.||++..|||||||
T Consensus 161 f~~~~~~~~~~~~---~~~~~~~-----------------------~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPD---GVSREEY-----------------------AKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCC---CCCHHHH-----------------------HHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 9988764321100 0000000 0123466899999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEEecC
Q 000628 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGP 427 (1383)
Q Consensus 348 kqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G~ 427 (1383)
||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..++|+|+++|||+++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999986689999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcCCCCcc---
Q 000628 428 RDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKS--- 504 (1383)
Q Consensus 428 ~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 504 (1383)
++++.+||+++||+||++.++|||+++++++.++ +++.. .+.....+.++++++|++++.++++.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~-~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPG-YEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hcccc-ccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999987643 22111 111123568899999999988777666554322110
Q ss_pred ------------cCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCC
Q 000628 505 ------------QAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNG 572 (1383)
Q Consensus 505 ------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~ 572 (1383)
...+......+|..++|+|++.|++|+++.++||+..++.++++.+++|+++|++||+.+.+. .+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hh
Confidence 000112233467889999999999999999999999999999999999999999999987543 34
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchH
Q 000628 573 GSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAA 652 (1383)
Q Consensus 573 ~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 652 (1383)
.+.+.|++||++++.++.++.++...+.+||+|+|||..++|++++|+++..+.++|+.++.+++|++++|||+|+++++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 56789999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHH
Q 000628 653 SRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLV 732 (1383)
Q Consensus 653 ~~f~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 732 (1383)
++||.++++.++...++.++++++++++++..+|+.+++++++++++++||+++.++||+||+|++|+||+.|+++++++
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccCC--C-CC---------CCc---------cccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHH
Q 000628 733 NEFLGGRWDAQN--K-DP---------SIN---------QPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIA 791 (1383)
Q Consensus 733 nef~~~~~~~~~--~-~~---------~~~---------~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~ 791 (1383)
|||.+..++|.. + ++ ..| +.+.|+.+|+. ++.....|+|+++++++++.++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999999998842 1 11 011 13467777774 44445678999999999999999999999
Q ss_pred HHHhcCCCCCCCceeecccchhhhc--cCccccchhhhhcccccc--ccccccccc-Cccc-cc--cCCcEEEEecccee
Q 000628 792 ALAYLNPIGDSNSTVIEEDGEKQRA--SGHEAEGMQMAVRSSSKT--VGAAQNVTN-RGMI-LP--FQPLSLTFDNMSYF 863 (1383)
Q Consensus 792 ~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~g~~-~~--~~~~~l~~~~~~~~ 863 (1383)
++++.++.................. .....+.....+...... .......+. .... .| .....++|+|++|.
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~~ 768 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTYE 768 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEEE
Confidence 9999986544433322221111000 000000000000000000 000000000 0000 01 11235789999987
Q ss_pred eeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCccCChhcccceE
Q 000628 864 VDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKNQETFARVS 942 (1383)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~~~~~~~~~~~ 942 (1383)
++.+ .+++.+|+|||++++|||++||||||||||||||++|+|+.++| +.+|+|.+||.+... .+++.+
T Consensus 769 ~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i 838 (1394)
T TIGR00956 769 VKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSI 838 (1394)
T ss_pred ecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcce
Confidence 6421 12467999999999999999999999999999999999987644 346999999998753 467889
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh
Q 000628 943 GYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELV 1022 (1383)
Q Consensus 943 gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~ 1022 (1383)
|||+|+|.+++.+||+|+|.|++.++.+.+.++++++++++++++.++|.++.|+.+|.++. +|||||||||+||+||+
T Consensus 839 ~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~ 917 (1394)
T TIGR00956 839 GYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVELV 917 (1394)
T ss_pred eeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHH
Confidence 99999999999999999999999888766666667778899999999999999999886543 89999999999999999
Q ss_pred hCCC-CceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCcchhHHHH
Q 000628 1023 ANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIE 1101 (1383)
Q Consensus 1023 ~~p~-illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~~ 1101 (1383)
.+|+ ||||||||||||+.++..|++.|++++++|+|||+|+|||+..+++.||++++|++||+++|.|+.+++++++++
T Consensus 918 ~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~ 997 (1394)
T TIGR00956 918 AKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTIIN 997 (1394)
T ss_pred cCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHHH
Confidence 9997 999999999999999999999999998889999999999997678899999999987799999999988889999
Q ss_pred HHHhCCCCcCcccccCcccchhhhccccchhcccccHHHHHhhchHHHHHHHHHHhhCCCCCCC---CCCCCCCCCCCch
Q 000628 1102 YFEAVPGVPKIKEAYNPATWMLEVSNISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGS---SDLYFPTKYSQPF 1178 (1383)
Q Consensus 1102 ~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 1178 (1383)
||+++ |.++||+++|||||++|+++...+.....++.+.|+.|+++++..+.++++..+.... .+....++|+.|+
T Consensus 998 yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 1076 (1394)
T TIGR00956 998 YFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAASL 1076 (1394)
T ss_pred HHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCCH
Confidence 99987 5567999999999999998765444444689999999998877766665544332211 1111235789999
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000628 1179 LTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVIC 1258 (1383)
Q Consensus 1179 ~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~ 1258 (1383)
++|++.|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++. +.+++|.|.
T Consensus 1077 ~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~-~~~~~~~f~ 1152 (1394)
T TIGR00956 1077 WYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPL-IQQYLPPFV 1152 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHH-HHHhhhhHH
Confidence 999999999999999999999999999999999999999999986 5789999999999998888776 346678888
Q ss_pred HHHHHH-HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccchhH-------HHHHHHHHHHHHHHHHH
Q 000628 1259 VERTVY-YRERAAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWELGK-------FCLFFYFMWASFIIFTL 1330 (1383)
Q Consensus 1259 ~er~v~-~RE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~-------f~~~~~~~~~~~~~~~~ 1330 (1383)
.||.+| +|||++|+|++.+|++|++++|+|+.++++++|++|+|||+||++++.. ||+|+++++++.+++++
T Consensus 1153 ~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~s 1232 (1394)
T TIGR00956 1153 AQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLYFST 1232 (1394)
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHHHHH
Confidence 888885 9999999999999999999999999999999999999999999988866 99999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHccccccCccccccccccccc
Q 000628 1331 YGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVVKLKMNKTEL 1378 (1383)
Q Consensus 1331 ~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~~ 1378 (1383)
+|+++++++|+.++|+.+++++++++++||||++|+++||.||+|+.|
T Consensus 1233 ~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~ 1280 (1394)
T TIGR00956 1233 LGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYR 1280 (1394)
T ss_pred HHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHh
Confidence 999999999999999999999999999999999999999999998653
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-83 Score=798.72 Aligned_cols=502 Identities=33% Similarity=0.613 Sum_probs=442.0
Q ss_pred CCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc-eEEEEEEEc
Q 000628 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKIS 929 (1383)
Q Consensus 851 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~ 929 (1383)
.+..+.|+|+++..+.+.. ..+++|+|||+.++|||++||||||||||||||++|+|+..+| ..+|+|++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 4567899999987654321 3578999999999999999999999999999999999998764 689999999
Q ss_pred CccCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 930 GYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 930 g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
|++.....+++.+|||.|+|.++|++||+|+|.|+|.+|++.+.++++++++|+++++.+||.+++|+.+|.++.+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988899999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
||||||+||.+|+.||+||||||||||||+.++..++++|+++|++|+|||+|+|||+.++++.||++++|.+ |+++|.
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 799999
Q ss_pred cCCCcchhHHHHHHHhCCCCcCcccccCcccchhhhcccc-chhcccccHHHH------HhhchHHHHHH-HHHHhhCCC
Q 000628 1090 GPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNIS-VENQLGIDFAEV------YADSSLHQRNK-ELIKELSTP 1161 (1383)
Q Consensus 1090 g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~-~~~~~~~~~~~~------~~~s~~~~~~~-~~~~~~~~~ 1161 (1383)
|++ +++.+||+++ |. +||+.+||+||.+|+.+.. ..... ....+. ++......+.. ...+.+...
T Consensus 253 G~~----~~~~~ff~~~-G~-~~P~~~Npadf~l~l~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GF-PCPELENPADFLLDLLSVDSGTREL-EEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS 325 (613)
T ss_pred cCH----HHHHHHHHhC-CC-CCCCcCChHHHHHHHHccCCCchhH-HhHHHHHHHhhhccccchhhhhHHHHhhhcccc
Confidence 997 5789999999 55 4999999999999988742 11000 011111 11011111110 001111111
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHH
Q 000628 1162 PPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSI 1241 (1383)
Q Consensus 1162 ~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~ 1241 (1383)
.+ .+.....+||.|+..+++|.+++.+|+|.+...|+++.+++|+++|++||+.+. +..+++++.|++|+.
T Consensus 326 ----~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~ 396 (613)
T KOG0061|consen 326 ----KK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFI 396 (613)
T ss_pred ----cc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHH
Confidence 11 111127899999999999999999999999999999999999999999999976 445666999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccchhHHHHHHHHH
Q 000628 1242 CIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWELGKFCLFFYFM 1321 (1383)
Q Consensus 1242 ~~~~~~~~~~~~~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~ 1321 (1383)
+.++.+..+...++.|+.||.+|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++...|++|++++
T Consensus 397 ~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~ 476 (613)
T KOG0061|consen 397 LSFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLII 476 (613)
T ss_pred HHHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHH
Confidence 99998888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHccccccCcccccccccccc
Q 000628 1322 WASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVVKLKMNKTE 1377 (1383)
Q Consensus 1322 ~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~ 1377 (1383)
++..+.+.++|++++++.||..+|..+++++..++++|+||+++.+.||.||+|+.
T Consensus 477 ~~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~ 532 (613)
T KOG0061|consen 477 LLSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWIS 532 (613)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999884
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3.1e-82 Score=799.01 Aligned_cols=511 Identities=26% Similarity=0.467 Sum_probs=430.5
Q ss_pred CCcEEEEeccceeeeccc----------------cccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhc
Q 000628 851 QPLSLTFDNMSYFVDMPA----------------EMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLA 914 (1383)
Q Consensus 851 ~~~~l~~~~~~~~~~~~~----------------~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~ 914 (1383)
.+..+.|.|++|.++... ..++....++++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367899999999886542 1111223345678999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc
Q 000628 915 GRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL 994 (1383)
Q Consensus 915 g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~ 994 (1383)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|.+.++.+.+...+++.++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9866444689999999886533 346689999999999999999999998877765555556667789999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhh
Q 000628 995 NDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1074 (1383)
Q Consensus 995 ~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~ 1074 (1383)
.|+.+|....++|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999887788999999999999999999999999999999999999999999999998889999999999987788999
Q ss_pred ceEEEEecCcEEEEecCCCcchhHHHHHHHhCCCCcCcccccCcccchhhhccccchhc------c---cccHHHHHhhc
Q 000628 1075 DELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPATWMLEVSNISVENQ------L---GIDFAEVYADS 1145 (1383)
Q Consensus 1075 d~~~~l~~gG~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~------~---~~~~~~~~~~s 1145 (1383)
|++++|.+ |+++|.|+. +++.+||++++ . +||+++|||||++|+++...+.. . .....+.|++.
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999974 899999986 57899999994 4 58999999999999987532110 0 01122334321
Q ss_pred hHHHHHHHHHHh--hCC-CCC-----CCCCCC-CCCCCCCchHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q 000628 1146 SLHQRNKELIKE--LST-PPP-----GSSDLY-FPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGL 1216 (1383)
Q Consensus 1146 ~~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1216 (1383)
. .++..+.++. ... +.+ ..+... ..+.+..+||+|+.+|++|++++ ||++.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111 000 000 001000 11235678999999999999998 99999999999999999999999
Q ss_pred HhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 000628 1217 IYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAVEIIYVSVQSVV 1296 (1383)
Q Consensus 1217 ~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~ 1296 (1383)
+||+++ ..+++++.|++|++++++++.+++.++|.|+.||+||+|||++|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999885 467899999999999999988888889999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHccccccCccccccccccc
Q 000628 1297 YVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVVKLKMNKT 1376 (1383)
Q Consensus 1297 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~ 1376 (1383)
|++|+|||+|+++++.+||+|+++++++.++++++|+++++++||.++|+.++++++.++++|+||+++ +||.||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999998
Q ss_pred cc
Q 000628 1377 EL 1378 (1383)
Q Consensus 1377 ~~ 1378 (1383)
.|
T Consensus 579 ~y 580 (659)
T PLN03211 579 KY 580 (659)
T ss_pred HH
Confidence 54
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2e-80 Score=784.25 Aligned_cols=490 Identities=32% Similarity=0.529 Sum_probs=433.8
Q ss_pred cceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 000628 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.+...+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999986543 3579999999987766678889999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~-~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1036 (1383)
+|||.|++.++.+.+...+++++.++++++.+||.+++|+.+|.++ .++|||||||||+||++|+.+|++|||||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999988877666677778889999999999999999999754 578999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCcchhHHHHHHHhCCCCcCccccc
Q 000628 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAY 1116 (1383)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~ 1116 (1383)
||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.|+. +++.+||++++ . +||++.
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~g-~-~~p~~~ 269 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDLG-H-PCPENY 269 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHcC-C-CCCCCC
Confidence 999999999999999998899999999999878999999999998 5899999996 57899999984 4 699999
Q ss_pred Ccccchhhhccccchhcc-----cccHHHHHhhchHHHHHHHHHHhhCCCCCC---CCCCCCCCCCCCchHHHHHHHHHH
Q 000628 1117 NPATWMLEVSNISVENQL-----GIDFAEVYADSSLHQRNKELIKELSTPPPG---SSDLYFPTKYSQPFLTQFRACFWK 1188 (1383)
Q Consensus 1117 npa~~~l~~~~~~~~~~~-----~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~q~~~l~~R 1188 (1383)
|||||++|+++...+... ..++.+.|+.|+.+++..+.......+.++ ..+....++|..+++.|+..|++|
T Consensus 270 n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 349 (617)
T TIGR00955 270 NPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKR 349 (617)
T ss_pred ChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHH
Confidence 999999999865432211 124556677776665544333222111111 111122356789999999999999
Q ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Q 000628 1189 QYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRER 1268 (1383)
Q Consensus 1189 ~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~RE~ 1268 (1383)
+++.+||||.++.+|+++.+++|+++|++||+++. ++++++++.|++|++++++++.++..+++.++.||.+|+||+
T Consensus 350 ~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~ 426 (617)
T TIGR00955 350 SWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRET 426 (617)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999986 467899999999999999998888888899999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 000628 1269 AAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIV 1348 (1383)
Q Consensus 1269 ~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~ 1348 (1383)
.+|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++..||+|+++++++.++++++|+++++++|+..+|..+
T Consensus 427 ~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~ 506 (617)
T TIGR00955 427 RSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTV 506 (617)
T ss_pred cCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccccccCccccccccccccc
Q 000628 1349 LSFFLSVWNLFSGFLVARSVVKLKMNKTEL 1378 (1383)
Q Consensus 1349 ~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~~ 1378 (1383)
+++++.++++|+||+++.++||+||+|+.|
T Consensus 507 ~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~ 536 (617)
T TIGR00955 507 GPPFVIPFLLFGGFFINSDSIPVYFKWLSY 536 (617)
T ss_pred HHHHHHHHHHHhhcccChhhccHHHHHHHH
Confidence 999999999999999999999999998764
No 7
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.9e-80 Score=768.43 Aligned_cols=587 Identities=28% Similarity=0.497 Sum_probs=491.3
Q ss_pred CCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceeeeeeEEEEeCCeEEEEEcCCCCCHHH
Q 000628 133 IPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTT 212 (1383)
Q Consensus 133 ~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 212 (1383)
...++++|+|+++++... .+..+++|+||||+++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 356789999999986431 114578999999999999999999999999999
Q ss_pred HHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhc
Q 000628 213 LMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQA 292 (1383)
Q Consensus 213 LL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 292 (1383)
||++|+|+.++...++|+|++||++.+....++.+|||.|+|.++|++||+|||.|+|+++.+.. +++.+
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~~~~--- 141 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LSKEE--- 141 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CCHHH---
Confidence 99999999987667899999999888777778899999999999999999999999999987642 11222
Q ss_pred CCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCC
Q 000628 293 GIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTG 372 (1383)
Q Consensus 293 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsg 372 (1383)
...++|.+++.|||.+|+||+||+...|||||||||||+||..|+.+|.||||||||||
T Consensus 142 ---------------------k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 142 ---------------------KRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred ---------------------HHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 23468999999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHH
Q 000628 373 LDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFL 452 (1383)
Q Consensus 373 LD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl 452 (1383)
||+.++.++++.|+++|+. |+|||+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcCCCCcccCCCCccccCccCCcHHHHHHHHHHHHH
Q 000628 453 QEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREW 532 (1383)
Q Consensus 453 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~ 532 (1383)
.++.+..++.+..... .......+.++..+...+......... .+ ..........++|.|+..+++|.+
T Consensus 280 l~l~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~s~~~q~~~L~~R~~ 348 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA------VRIAKLINKFSQTDNLKKTLEALEKSL----ST-SKKVEIGTSPSWWTQFKILLKRSL 348 (613)
T ss_pred HHHHccCCCchhHHhH------HHHHHHhhhccccchhhhhHHHHhhhc----cc-ccccccccCCcHHHHHHHHHHHHh
Confidence 9987743110000000 000000111110000000000000000 00 000011116789999999999999
Q ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhHHHHHHHHHHHHHHHH-HHHHHhhhhhHhhhhccC
Q 000628 533 LLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFA-ENAMTVLRLPIFYKQRDH 611 (1383)
Q Consensus 533 l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~-~~~~~~~~~~vf~k~r~~ 611 (1383)
..++|++.+...+.++.+++++++|++||+.+.+.. ......|.+||.+....+..+. .+.....++++|.||+..
T Consensus 349 ~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~ 425 (613)
T KOG0061|consen 349 KNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETSS 425 (613)
T ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHhc
Confidence 999999999999999999999999999999864332 3336788888888888676655 578888999999999999
Q ss_pred cccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Q 000628 612 LFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGT 691 (1383)
Q Consensus 612 ~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~ 691 (1383)
+.|+.++|++++.+.++|+.++.+++|..++|||+|++++..+|+.+.+..++...++.+++.+++++.++...|.++++
T Consensus 426 ~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~ 505 (613)
T KOG0061|consen 426 GLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLGP 505 (613)
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCccccCCCCCCCccccccchhhcccCccccCcch
Q 000628 692 FILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWY 771 (1383)
Q Consensus 692 ~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~ 771 (1383)
++++.+++++||+++.+.||+||.|+.|+|+..|++++++.|||.+....|....+ .++...|..++...++...+ .
T Consensus 506 ~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~--~ 582 (613)
T KOG0061|consen 506 VLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGN-LCCESTGEDVLKQLGFEDSS--F 582 (613)
T ss_pred HHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcC-CcccccHHHHHHhcCCcccc--c
Confidence 99999999999999999999999999999999999999999999873333322211 35667788888888886554 6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcC
Q 000628 772 WIGVGALTGYSFLFNFLFIAALAYLN 797 (1383)
Q Consensus 772 w~~~~~l~~~~~~f~~l~~~~l~~~~ 797 (1383)
|.++.++.++.++|.+++++++++..
T Consensus 583 ~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 583 WLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 89999999999999999999998754
No 8
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=3.1e-79 Score=773.51 Aligned_cols=572 Identities=26% Similarity=0.465 Sum_probs=481.9
Q ss_pred cccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCC
Q 000628 181 KRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 181 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~l 260 (1383)
+.++++|+|+|++++|||+++|+|||||||||||++|+|+.++....+|+|.+||++++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34577999999999999999999999999999999999998875456899999999886544567899999999999999
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc-
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM- 339 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 339 (1383)
||+|||.|+++++.+... .+.+ ....++.+++.+||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~~-------~~~~------------------------~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRV-------TKKE------------------------KRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCC-------CHHH------------------------HHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 999999999877643211 0001 11246789999999999999999864
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
.|||||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 789999999999999999999999999999999999999999999999986 4899999999999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000628 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1383)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 499 (1383)
|+++|+|+++++.+||+++|++||++.|++||+.++++....... . .....+++.+.|+.++..++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998765322110 0 011234555666665544444333221
Q ss_pred CCCcccC---CCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccch
Q 000628 500 PYDKSQA---HPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRY 576 (1383)
Q Consensus 500 ~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~ 576 (1383)
....... ........++..+++.|+..+++|.++..+||+..+..+.++.+++++++|++||+.+.+. .+.+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 1111000 0011122456788999999999999999999999999999999999999999999976543 344567
Q ss_pred hHHHHHHHHHHHHHHH-HHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHH
Q 000628 577 FGALFFSLLNIMFNGF-AENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRF 655 (1383)
Q Consensus 577 ~g~lff~l~~~~~~~~-~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f 655 (1383)
.|++|+.++..+|..+ ..+.....++++|+|||..++|++++|++++.+.++|+.++.+++|.+++||++|+++++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 8889999888887765 445666789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHh
Q 000628 656 FKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEF 735 (1383)
Q Consensus 656 ~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef 735 (1383)
|.+++++++...++.+++.++++++++..+|..+++++++++++++||+++.++||+||+|++|+||+.|+++++++|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-ccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhc
Q 000628 736 LGGRW-DAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYL 796 (1383)
Q Consensus 736 ~~~~~-~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~ 796 (1383)
.+..+ .|...+....|...|..+++.+|+..+ ++|.++++++++.++|.+++++++++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88776 443222111234568889998888664 459999999999999999999999864
No 9
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=6.7e-78 Score=759.60 Aligned_cols=609 Identities=21% Similarity=0.337 Sum_probs=470.7
Q ss_pred CCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceeeeeeEEEEeCCeEEEEEcCCCCCHHH
Q 000628 133 IPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTT 212 (1383)
Q Consensus 133 ~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 212 (1383)
.+.++++|.|+++.+.......+... ....+...-...+... +..++++|+|||++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~-~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPKISDETR-QIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----cccccccccccccccc-cCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 35789999999998753210111110 0111100000111111 223467999999999999999999999999999
Q ss_pred HHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhc
Q 000628 213 LMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQA 292 (1383)
Q Consensus 213 LL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 292 (1383)
||++|+|+++++ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.+.. ..+.+
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~~~~--- 177 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LTKQE--- 177 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CCHHH---
Confidence 999999998764 2589999999987542 23569999999999999999999999866542210 00000
Q ss_pred CCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCC
Q 000628 293 GIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTG 372 (1383)
Q Consensus 293 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsg 372 (1383)
....++.+++.+||++++||.+|+...++|||||||||+||++|+.+|+||+|||||+|
T Consensus 178 ---------------------~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 178 ---------------------KILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred ---------------------HHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 11236778999999999999999988999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHH
Q 000628 373 LDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFL 452 (1383)
Q Consensus 373 LD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl 452 (1383)
||+.++.++++.|+++++ .++|+|+++|||..+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999987 4899999999999889999999999999999999999999999999999999999999999
Q ss_pred HhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcC---CCCccc------CCCCccccCccCCcHHHH
Q 000628 453 QEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV---PYDKSQ------AHPASLVKEKYGISKWEL 523 (1383)
Q Consensus 453 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~------~~~~~~~~~~~~~s~~~~ 523 (1383)
.++++...+.........+ ...+...+.|++.. .+...+.... +....+ ..........+..++|.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000000 01122333443211 1111111000 000000 000000112245679999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhHHHHHHHHHHHH-HHHHHHHHHhhhh
Q 000628 524 FRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMF-NGFAENAMTVLRL 602 (1383)
Q Consensus 524 ~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~-~~~~~~~~~~~~~ 602 (1383)
+..+++|.++. +|+......|+++.+++|+++|++||+.+ ..+.+.+.|++||.+++.++ +.+..+..+..++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78887778999999999999999999864 23456788999999777554 5567778888899
Q ss_pred hHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000628 603 PIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRT 682 (1383)
Q Consensus 603 ~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~iaa~~~~ 682 (1383)
++|+|||..++|++++|++++++.++|+.++.+++|++++|||+|+++++++|+.+++++++...++.+++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCcc-----ccCCCCCCCccccccch
Q 000628 683 EVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRW-----DAQNKDPSINQPTIGKV 757 (1383)
Q Consensus 683 ~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~-----~~~~~~~~~~~~~~G~~ 757 (1383)
..+|+++++++.+++++|+||+++ +||+||+|++|+||+.|+++++++|||.+.+. +|.... +....+..
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~---~~~~~~c~ 620 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPH---GSDRASCK 620 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcc---cCCCCCCc
Confidence 999999999999999999999997 79999999999999999999999999976542 332211 00011111
Q ss_pred hhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcC
Q 000628 758 LLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLN 797 (1383)
Q Consensus 758 ~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~ 797 (1383)
++....+. ....|.++++++++.++|.++.++++++.+
T Consensus 621 ~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 621 FVEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred cchhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222222 234788999999999999999999998654
No 10
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.7e-76 Score=792.96 Aligned_cols=599 Identities=22% Similarity=0.402 Sum_probs=496.3
Q ss_pred CCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceeeeeeEEEEeCCeEEEEEcCCCCCH
Q 000628 131 IEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGK 210 (1383)
Q Consensus 131 ~~~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 210 (1383)
++...+.+.|+|++++++...+.+ + ....+.++++|+|||+.++||++++|+|||||||
T Consensus 861 ~~~~~~~~~~~~v~y~v~~~~~~~--------------------~-~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGK 919 (1470)
T PLN03140 861 LPFTPLAMSFDDVNYFVDMPAEMK--------------------E-QGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGK 919 (1470)
T ss_pred cCCCcceEEEEEEEEEEccCcccc--------------------c-cccCcCCceEeeCcEEEEECCeEEEEECCCCCCH
Confidence 455567899999999875431100 0 0111234579999999999999999999999999
Q ss_pred HHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHH
Q 000628 211 TTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREK 290 (1383)
Q Consensus 211 STLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~ 290 (1383)
||||++|+|+.++. ..+|+|.+||++.++...++.+|||+|+|.|++.+||+|||.|++.++.+... .+.+
T Consensus 920 TTLL~~LaG~~~~g-~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~-------~~~~- 990 (1470)
T PLN03140 920 TTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEV-------SKEE- 990 (1470)
T ss_pred HHHHHHHcCCCCCC-cccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCC-------CHHH-
Confidence 99999999997642 35899999998876444457799999999999999999999998765422110 0000
Q ss_pred hcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCC
Q 000628 291 QAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEIS 370 (1383)
Q Consensus 291 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEpt 370 (1383)
....++++++.+||++++|+.+|++..+||||||||||+||++|+.+|++|||||||
T Consensus 991 -----------------------~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPT 1047 (1470)
T PLN03140 991 -----------------------KMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPT 1047 (1470)
T ss_pred -----------------------HHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCC
Confidence 112467899999999999999998878899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC-CeEEEecCh----hHHHHHHHhc-CC-CCC
Q 000628 371 TGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE-GQIVYQGPR----DNVLEFFEHM-GF-KCP 443 (1383)
Q Consensus 371 sgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~-G~iv~~G~~----~~~~~~f~~l-Gf-~~p 443 (1383)
+|||+.++..+++.|+++++. ++|+|+++|||+.++++.||++++|++ |+++|+|+. +++.+||+++ |+ +||
T Consensus 1048 sgLD~~~a~~v~~~L~~l~~~-g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p 1126 (1470)
T PLN03140 1048 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIK 1126 (1470)
T ss_pred CCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCC
Confidence 999999999999999999874 789999999999889999999999996 899999996 6899999997 66 499
Q ss_pred CCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcCCCCcccCCCCccccCccCCcHHHH
Q 000628 444 ERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWEL 523 (1383)
Q Consensus 444 ~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~ 523 (1383)
+..|||||+.++++..... ....++++.|+.++.+++..+.+.................+|..++|.|
T Consensus 1127 ~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 1194 (1470)
T PLN03140 1127 EKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQ 1194 (1470)
T ss_pred CCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHH
Confidence 9999999999997643211 1124678888888776665443321111000111111235678899999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhHHHHHHHHHHHHHHHH-HHHHHhhhh
Q 000628 524 FRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFA-ENAMTVLRL 602 (1383)
Q Consensus 524 ~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~-~~~~~~~~~ 602 (1383)
++.|++|+++.+||++.....|+++.+++|+++|++||+.+.+..+.++.++..|++|+++++..++... .++....+|
T Consensus 1195 ~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR 1274 (1470)
T PLN03140 1195 FKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVER 1274 (1470)
T ss_pred HHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998866555566667789999988887775544 345666799
Q ss_pred hHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000628 603 PIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRT 682 (1383)
Q Consensus 603 ~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~iaa~~~~ 682 (1383)
++|+|||..++|++++|+++..+.++|+.++.+++|.+++|||+|+.++++.||.+++..++....+.+++.++++++++
T Consensus 1275 ~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~ 1354 (1470)
T PLN03140 1275 TVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPN 1354 (1470)
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCccccCCCCCCCccccccchhhccc
Q 000628 683 EVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIR 762 (1383)
Q Consensus 683 ~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~ 762 (1383)
..+|..+++++..++++|+||++++++||+||+|+||+||+.|++++++.|||.+....|.+++. .+..+..+.+++.+
T Consensus 1355 ~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~ 1433 (1470)
T PLN03140 1355 QQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGG-APDPTIKWYIQDHY 1433 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCC-CCCCcHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999887665544321 01122234456777
Q ss_pred CccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000628 763 GFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNP 798 (1383)
Q Consensus 763 ~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~ 798 (1383)
|+.. .|.|.++++++++.++|.+++++++++++.
T Consensus 1434 g~~~--~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1434 GYDP--DFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred CcCc--ccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 8854 468999999999999999999999999875
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5e-76 Score=739.31 Aligned_cols=765 Identities=23% Similarity=0.333 Sum_probs=423.9
Q ss_pred CCcccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCC
Q 000628 179 SKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL 255 (1383)
Q Consensus 179 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~ 255 (1383)
+.+++.+||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|.+||+++.++.. +..+|.|+|+|.
T Consensus 361 PsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePv 437 (1228)
T KOG0055|consen 361 PSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPV 437 (1228)
T ss_pred CCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechh
Confidence 3345678999999999999999999999999999999999999998 9999999999988764 578999999998
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1383)
+|. .||+|||.|+ +|+.+.++..+|++.++.. +. +..|++.+||.|
T Consensus 438 lF~-~tI~eNI~~G-------------------------~~dat~~~i~~a~k~ana~-----~f---i~~lp~g~~T~v 483 (1228)
T KOG0055|consen 438 LFA-TTIRENIRYG-------------------------KPDATREEIEEAAKAANAH-----DF---ILKLPDGYDTLV 483 (1228)
T ss_pred hhc-ccHHHHHhcC-------------------------CCcccHHHHHHHHHHccHH-----HH---HHhhHHhhcccc
Confidence 885 6999999986 2344555566666655432 33 345899999999
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
|+.. -.|||||||||+|||||+.+|+|||||||||+||+.+...+.+.|++..+ |+|+|+..|.. .+.+.+|+|+
T Consensus 484 ge~g-~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTivVaHRL--StIrnaD~I~ 558 (1228)
T KOG0055|consen 484 GERG-VQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIVVAHRL--STIRNADKIA 558 (1228)
T ss_pred cCCC-CCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEEEeeeh--hhhhccCEEE
Confidence 9832 22999999999999999999999999999999999999999999998875 56777776654 5677799999
Q ss_pred EEcCCeEEEecChhHHHHHHHhcCCCCCCCCChh-HH--HHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCc----
Q 000628 416 LLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVA-DF--LQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFH---- 488 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~a-df--l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 488 (1383)
+|++|+|++.|+++|+++. .+.. +. +|+.....+.+ .. ... ..++.....+.+.
T Consensus 559 v~~~G~IvE~G~h~ELi~~-----------~G~Y~~lv~~Q~~~~~~~~~-~~---~~~----~~~~~~~s~~~s~~~~~ 619 (1228)
T KOG0055|consen 559 VMEEGKIVEQGTHDELIAL-----------GGIYSSLVRLQELEKAAEDE-EE---EES----LKEERSRSLKSSSSSPS 619 (1228)
T ss_pred EEECCEEEEecCHHHHHhc-----------cchHHHHHHHHhhhhhhhcc-cc---ccc----hhhhhhhcccccccccc
Confidence 9999999999999999862 0111 11 11111111100 00 000 0000000000000
Q ss_pred cchh-HHhhh--cCCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHH-------HHHHHHHHHHH
Q 000628 489 MGQQ-IASDL--RVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTF-------QLTFMSLICMT 558 (1383)
Q Consensus 489 ~~~~-~~~~l--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~-------~~~i~ali~~t 558 (1383)
.... ..... ..+.++....+. .......+.|+.++. .+.++...+...+ ...+.+++++.
T Consensus 620 ~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~s~~~i~k~--------~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~ 689 (1228)
T KOG0055|consen 620 LSRGSNRSNLLSVKPEGEDPEEPV--SEEDEKVSFWRIFKL--------NKPEWPYLLLGSLGAAIRGATYPLFAYVFSQ 689 (1228)
T ss_pred ccCCcccccccccccccccccccc--ccccccccHHHHHHh--------ccchhHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 0000 00000 000000000000 011123344444432 3333333333222 22333333333
Q ss_pred h---hhcccCCcCCCCCccchhHHHHHHHHH----------HHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHH
Q 000628 559 V---YFRTEMSVGDMNGGSRYFGALFFSLLN----------IMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWL 625 (1383)
Q Consensus 559 v---f~~~~~~~~~~~~~~~~~g~lff~l~~----------~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l 625 (1383)
+ |+..+. +.+......+..+|..+.. .+|.-.+|....-.|...|.+ +
T Consensus 690 ~~~~f~~~~~--~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~-----------------l 750 (1228)
T KOG0055|consen 690 VLEAFYPPDD--DELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRA-----------------L 750 (1228)
T ss_pred HHHHHhCCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------H
Confidence 2 222211 1111112224444433322 222333333333333333322 2
Q ss_pred HHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH---------HHHHHHHHHHHHHHHhccchHHHHHHHHHHH--
Q 000628 626 LRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFF---------SIHNMSLPLYRLVAAVGRTEVISNTLGTFIL-- 694 (1383)
Q Consensus 626 ~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~---------~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~-- 694 (1383)
++.++.+++-. ... ++...++...- -...+...+..++.++.-....++-++.+++
T Consensus 751 l~qd~~wFD~~------------~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~ 817 (1228)
T KOG0055|consen 751 LRQEVGWFDDP------------ENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLAT 817 (1228)
T ss_pred HcCCCcccCCC------------ccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222210 000 11111111000 0000001111111111111122222222211
Q ss_pred HHHHHHhhhccccCCchhhHHHHHHHc---HHHHHHHHHHHHHhcCCccccCCCCCCCccccccchhhcccCc-----cc
Q 000628 695 LIMMSLGGFVMAKDDIEPFLRWGYYIS---PMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGF-----ST 766 (1383)
Q Consensus 695 ~~~~l~~Gf~i~~~~ip~~~~W~~~is---p~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~-----~~ 766 (1383)
.+++.++++.-.. ++.-.+ --.|.-.+.+.+|-..+-.... ..+..+.+.+.+.- ..
T Consensus 818 ~Pll~~~~~~~~~--------~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~-------al~~e~~~~~~y~~~l~~p~~ 882 (1228)
T KOG0055|consen 818 FPLLILSGYLQKK--------FLKGFSKDDKKAYEEASKIAIEAVSNIRTVA-------ALCAEEKFMELYKEELEKPRK 882 (1228)
T ss_pred HHHHHHHHHHHHH--------HHhhhhHHHHHHHHHHHHHHHHHHHhHHHHH-------HHhhHHHHHHHHHHHHHHHHH
Confidence 1122222221100 000000 0011111222222211100000 00000001100000 00
Q ss_pred --cCcchhhHHHHHHHHHHHH---HHHHHHHHHhcCCCCCCCceeecccchh-----------hhc--cCcc-ccchh--
Q 000628 767 --ESNWYWIGVGALTGYSFLF---NFLFIAALAYLNPIGDSNSTVIEEDGEK-----------QRA--SGHE-AEGMQ-- 825 (1383)
Q Consensus 767 --~~~~~w~~~~~l~~~~~~f---~~l~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~--~~~~-~~~~~-- 825 (1383)
-....|.+++.-+...++| .+.++.+...... +. ....+..+. ... ...+ .....
T Consensus 883 ~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~-g~---~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa 958 (1228)
T KOG0055|consen 883 SSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISN-GE---MTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAA 958 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-CC---cCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHH
Confidence 0011233333222222222 1222222222211 00 000000000 000 0000 00000
Q ss_pred hhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCc
Q 000628 826 MAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAG 905 (1383)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaG 905 (1383)
...-...............+...|.....++|+||++.+|..+ +.+||+|+|+++++|+.+||+||||||
T Consensus 959 ~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsG 1028 (1228)
T KOG0055|consen 959 GSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSG 1028 (1228)
T ss_pred HHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCC
Confidence 0000000000000111112223344456799999999987544 467999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHH
Q 000628 906 KTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFV 982 (1383)
Q Consensus 906 KTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v 982 (1383)
|||.+.+|-+..+ +..|.|.|||.++.. ..+|+++|.|.|+|.++. -|++||+.|+. .+.+.++ +
T Consensus 1029 KSTvI~LLeRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~e----I 1096 (1228)
T KOG0055|consen 1029 KSTVISLLERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEEE----I 1096 (1228)
T ss_pred HHHHHHHHHHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHHH----H
Confidence 9999999987655 458999999998654 567899999999999975 69999999981 1133332 3
Q ss_pred HHHHHHc-------CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC
Q 000628 983 DEVMELV-------ELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 1055 (1383)
Q Consensus 983 ~~~l~~l-------~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~ 1055 (1383)
.++++.. +|.+-.|+.+|..|. +||||||||++||||+++||+||||||+||.||+++.+.|+++|++.. .
T Consensus 1097 i~Aak~ANaH~FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~ 1174 (1228)
T KOG0055|consen 1097 IEAAKLANAHNFISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-E 1174 (1228)
T ss_pred HHHHHHhhhHHHHhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-c
Confidence 3334333 344556888887654 799999999999999999999999999999999999999999999975 6
Q ss_pred CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1056 GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1056 g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|+|.|+++|+++ ..+.+|.|.++++ |++++.|+.
T Consensus 1175 gRT~IvIAHRLS--TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1175 GRTTIVIAHRLS--TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred CCcEEEEecchh--hhhcCCEEEEEEC-CEEEecccH
Confidence 999999999976 6789999999985 899999985
No 12
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.3e-76 Score=800.66 Aligned_cols=490 Identities=22% Similarity=0.369 Sum_probs=427.2
Q ss_pred ccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC--ceEEEEEEEcCccCCh--hcccceEEEEccCCCCCC
Q 000628 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSP 953 (1383)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~ 953 (1383)
.++++|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+... ..+++.++||+|+|.+++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 456799999999999999999999999999999999997532 2468999999987642 234567999999999999
Q ss_pred CCCHHHHHHHHHHhhcCC----CCcHHHHHH-HHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000628 954 YVTVYESLLYSAWLRLSS----DVDTKKRKM-FVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1383)
Q Consensus 954 ~lTv~E~l~f~~~l~~~~----~~~~~~~~~-~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~il 1028 (1383)
.+||+|+|.|++.++.+. +...++..+ .++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+||
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999998877543 223344333 357799999999999999998888999999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCcchhHHHHHHHhCC
Q 000628 1029 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVP 1107 (1383)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~~~f~~~~ 1107 (1383)
+|||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|.+ |+++|.|+. +++.+||+++
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~l- 305 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKM- 305 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHc-
Confidence 999999999999999999999999874 999999999998789999999999985 899999986 5789999999
Q ss_pred CCcCcccccCcccchhhhccccchh----------cccccHHHHHhhchHHHHHHHHHHhhCCCC---------------
Q 000628 1108 GVPKIKEAYNPATWMLEVSNISVEN----------QLGIDFAEVYADSSLHQRNKELIKELSTPP--------------- 1162 (1383)
Q Consensus 1108 ~~~~~~~~~npa~~~l~~~~~~~~~----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1162 (1383)
|. +||++.|||||++++++...+. ....++++.|++|+.+++..+.+++.....
T Consensus 306 G~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 306 GF-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred CC-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 44 6999999999999998754211 112468899999998876655543321110
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCCCHhhHHHHHHHHHHHH
Q 000628 1163 PGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSIC 1242 (1383)
Q Consensus 1163 ~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~ 1242 (1383)
...+.....+.|..|+++|+++|++|+++.+||||.++.+|+++.+++|+++|++||+++. ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011122234688999999999999999999999999999999999999999999999986 4578999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccchhHHHHHHHHHH
Q 000628 1243 IFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAVEIIYVSVQSVVYVLILYAMIGFKWELGKFCLFFYFMW 1322 (1383)
Q Consensus 1243 ~~~~~~~~~~~~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1322 (1383)
++.+++++..+ +.+..||+||+|||.+|+|++++|++|++++|+|+.++.+++|++|+|||+||+++++.||.|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99998876554 55667999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHccccccCccccccccccccc
Q 000628 1323 ASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSVVKLKMNKTEL 1378 (1383)
Q Consensus 1323 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~~~~~ 1378 (1383)
++.++++++++++++++||..+|+.++++++.++++|+||++|+++||+||+|+.|
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~y 596 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYY 596 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999864
No 13
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.7e-69 Score=725.29 Aligned_cols=217 Identities=25% Similarity=0.399 Sum_probs=186.8
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|++..++ .+++.+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|++.
T Consensus 1937 ~L~v~nLsK~Y~-----------~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYS-----------GTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEEC-----------CCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 478888876542 1125699999999999999999999999999999999997653 479999999876
Q ss_pred Ch--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000628 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1383)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1383)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+..|+.+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2345679999999999999999999998776653 233444567889999999998888874 4799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|||+++ ++...||++++|.+ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999975 67778999999985 89999998
Q ss_pred CC
Q 000628 1092 LG 1093 (1383)
Q Consensus 1092 ~~ 1093 (1383)
+.
T Consensus 2154 ~q 2155 (2272)
T TIGR01257 2154 IQ 2155 (2272)
T ss_pred HH
Confidence 63
No 14
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-70 Score=707.49 Aligned_cols=749 Identities=22% Similarity=0.284 Sum_probs=423.1
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 263 (1383)
.+.|+|||+.|++|+++||+||.|||||+||.+|.|+++.. +|+|.++| .+|||+|++|+++ .|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI~n-gTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWIQN-GTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHhhC-CcHH
Confidence 34899999999999999999999999999999999999875 99999998 4899999999996 6999
Q ss_pred HHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCC
Q 000628 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1383)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1383)
|||.|+.... .+||+...+.|..++|.. -|+.+..|.||+ .+-.|
T Consensus 600 eNILFG~~~d--~~rY~~Vi~aC~L~~Dle--------------------------------~Lp~GD~TeIGE-rGinL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--EERYDKVIKACALKKDLE--------------------------------ILPFGDLTEIGE-RGINL 644 (1381)
T ss_pred HhhhcCcccc--HHHHHHHHHHccCHhHHh--------------------------------hcCCCCcceecC-CccCC
Confidence 9999985542 244554444444443322 255677899997 33448
Q ss_pred ChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHH-HHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICK-FLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~-~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
||||||||++|||++.+++|++||+|.|++|+++..+|.+ +++.+- .++|+|..+|| .+....+|.|++|++|+|
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~ILVTHq--l~~L~~ad~Iivl~~G~I 720 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVILVTHQ--LQFLPHADQIIVLKDGKI 720 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEEEeCc--hhhhhhCCEEEEecCCeE
Confidence 9999999999999999999999999999999999999884 554433 36898888885 478899999999999999
Q ss_pred EEecChhHHHH---HHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000628 423 VYQGPRDNVLE---FFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1383)
Q Consensus 423 v~~G~~~~~~~---~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 499 (1383)
+..|+++|+.+ .|+.+ .. +....++.. ...+.+.......+ .+. +.. +......+.
T Consensus 721 ~~~Gty~el~~~~~~~~~l-~~------------~~~~~~~~~---~~~~~~~~~~~~~~-~~~-~~~---~~~~~~~~~ 779 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAEL-AH------------EEESEQEEE---ASEKDLESGESSRE-SES-RSL---ESLSSEEEK 779 (1381)
T ss_pred ecccCHHHHHhcchhHHHH-hh------------ccchhhccc---cccccccccccccc-hhh-hhh---hhhcccccc
Confidence 99999999984 33332 00 000000000 00000000000000 000 000 000000000
Q ss_pred -CCCcc-cCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHH-HHHHHHH----HHHHHHHHhhhcccCCcCCC--
Q 000628 500 -PYDKS-QAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYI-FKTFQLT----FMSLICMTVYFRTEMSVGDM-- 570 (1383)
Q Consensus 500 -~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~-~~~~~~~----i~ali~~tvf~~~~~~~~~~-- 570 (1383)
..++. +.+....+.++.|...|..++.|++..+ ...... +-+.+.. .++.-.+..||-........
T Consensus 780 ~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~-----g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~ 854 (1381)
T KOG0054|consen 780 SKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAG-----GFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTT 854 (1381)
T ss_pred cccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC
Confidence 00000 0011111223567788888888876421 111111 1111111 11222222333222111111
Q ss_pred CCccchhHHH-HHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCC
Q 000628 571 NGGSRYFGAL-FFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYD 649 (1383)
Q Consensus 571 ~~~~~~~g~l-ff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~ 649 (1383)
.+...+.+.. ++++...++..+....+.......-.+-++ .+-..+.+.|++||+++
T Consensus 855 ~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~---------~ml~~Ilrapm~FFdtT------------- 912 (1381)
T KOG0054|consen 855 VSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHD---------KLLNSILRAPMSFFDTT------------- 912 (1381)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHhCcchhcCCC-------------
Confidence 1222222221 111111111111111111111111011000 12234667777777765
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHh------ccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHH
Q 000628 650 PAASRFFKQFLAFFSIHNMSLPLYRLVAAV------GRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPM 723 (1383)
Q Consensus 650 ~~~~~f~~~~l~~~~~~~~~~~l~~~iaa~------~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~ 723 (1383)
..||.+++|..+....+...+........ +--.+++.....+++.++. +.++||....
T Consensus 913 -P~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~p---------------l~v~~~~~~~ 976 (1381)
T KOG0054|consen 913 -PTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIP---------------LGVIYYFVQR 976 (1381)
T ss_pred -CccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHH---------------HHHHHHHHHH
Confidence 45677777766655554443332111100 0000111111111111111 1223333333
Q ss_pred HHHHHHHHHHHhcCCccccCCCCCCCccc---cccchhhcccCccccCc----------------------chhhHHH--
Q 000628 724 MYGQTSLLVNEFLGGRWDAQNKDPSINQP---TIGKVLLKIRGFSTESN----------------------WYWIGVG-- 776 (1383)
Q Consensus 724 ~y~~~al~~nef~~~~~~~~~~~~~~~~~---~~G~~~l~~~~~~~~~~----------------------~~w~~~~-- 776 (1383)
+|--.+.-+....+ ....|.+++. -.|.. .+|.|..+.. -.|.++.
T Consensus 977 ~Y~~tsReLkRLes-----itRSPi~sh~~Etl~Gls--TIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle 1049 (1381)
T KOG0054|consen 977 YYLATSRELKRLES-----ITRSPIYSHFSETLQGLS--TIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLE 1049 (1381)
T ss_pred HHHHHhHHHHHhhh-----cccchHHHhHHHHhcCcc--eeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 44333332222211 1111211110 01111 1122211110 1133322
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCc-----eeecccchhhhc--cCccccchhhhhcccc---cccc----------
Q 000628 777 ALTGYSFLFNFLFIAALAYLNPIGDSNS-----TVIEEDGEKQRA--SGHEAEGMQMAVRSSS---KTVG---------- 836 (1383)
Q Consensus 777 ~l~~~~~~f~~l~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~---------- 836 (1383)
.+....+++..++.+ +........+.. +...-.+.-... ...+.+..+.++++.. ....
T Consensus 1050 ~ig~~~v~~~al~~v-l~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~ 1128 (1381)
T KOG0054|consen 1050 LLGNLVVLIAALFAV-LLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESR 1128 (1381)
T ss_pred HHHHHHHHHHHHHHH-HccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCC
Confidence 222222222111111 111110000000 000000000000 0000000000010000 0000
Q ss_pred cccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCC
Q 000628 837 AAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGR 916 (1383)
Q Consensus 837 ~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~ 916 (1383)
.+.+|+. ...++|+|++..+.. +-..+|||||++|+|||++||+|++|||||||+++|.+.
T Consensus 1129 pp~~WP~--------~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl 1189 (1381)
T KOG0054|consen 1129 PPPSWPS--------KGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRL 1189 (1381)
T ss_pred CCCCCCC--------CCeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHh
Confidence 1122222 246899997655532 124599999999999999999999999999999999987
Q ss_pred CCCceEEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc
Q 000628 917 KTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS 993 (1383)
Q Consensus 917 ~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~ 993 (1383)
.. +.+|+|.|||.++.+ .++|++++.+||||.++.. |||.| .|+..+..++.++++||..+|++
T Consensus 1190 ~e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsG-TvR~N----------LDPf~e~sD~~IW~ALe~~~Lk~ 1256 (1381)
T KOG0054|consen 1190 VE--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSG-TVRFN----------LDPFDEYSDDEIWEALERCQLKD 1256 (1381)
T ss_pred cC--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecC-ccccc----------cCcccccCHHHHHHHHHHhChHH
Confidence 65 357999999998765 5678899999999987643 55544 47777778888999999999977
Q ss_pred ccccccc------CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCc
Q 000628 994 LNDSMVG------LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1067 (1383)
Q Consensus 994 ~~~~~~g------~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 1067 (1383)
...+..+ .++..++|.||||.+|+||||+++++||+|||+|+++|+++...|+++||+.. +++|||++.|+.+
T Consensus 1257 ~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F-~dcTVltIAHRl~ 1335 (1381)
T KOG0054|consen 1257 VVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEF-KDCTVLTIAHRLN 1335 (1381)
T ss_pred HHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh-cCCeEEEEeeccc
Confidence 6433322 13456899999999999999999999999999999999999999999999977 4899999999975
Q ss_pred HHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1068 IDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1068 ~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
....+|+|++|++ |+++++|++.
T Consensus 1336 --TVmd~DrVlVld~-G~v~EfdsP~ 1358 (1381)
T KOG0054|consen 1336 --TVMDSDRVLVLDA-GRVVEFDSPA 1358 (1381)
T ss_pred --hhhhcCeEEEeeC-CeEeecCChH
Confidence 5667999999985 8999999874
No 15
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.5e-73 Score=707.33 Aligned_cols=533 Identities=26% Similarity=0.422 Sum_probs=457.3
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lT 261 (1383)
.++++|+||||.++||.+|||||+|||||||||++|||+.... .++|+|.+||.+.++...+|.+|||.|+|.|.+++|
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G-~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGG-YIEGDILISGFPKDQETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccc-eEEeEEEECCeeCchhhhccccceeecccccCcccc
Confidence 5678999999999999999999999999999999999997653 579999999999987778899999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|||.|.|+|.++.+.+ +...|| ...+|++++.++|++++|.+||+.. .
T Consensus 881 VrESL~fSA~LRlp~~-------v~~~ek------------------------~~yVe~Vi~lleL~~~~daiVG~~G-~ 928 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKE-------VSDEEK------------------------YEYVEEVIELLELKEYADALVGLPG-S 928 (1391)
T ss_pred hHHHHHHHHHHcCCCc-------CCHHHH------------------------HHHHHHHHHHhCchhhhhhhccCCC-C
Confidence 9999999998875532 111111 2358999999999999999999876 9
Q ss_pred CCChHHHHHHHHHHHHhcCC-CEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc-C
Q 000628 342 GISGGQKKRVTTGEMLVGTA-NVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS-E 419 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p-~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~-~ 419 (1383)
|||.+||||++||..|+.+| .||||||||||||+.++..|++.+|++++ .|.||+|++|||+.++++.||++++|. .
T Consensus 929 GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkrG 1007 (1391)
T KOG0065|consen 929 GLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKRG 1007 (1391)
T ss_pred CCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhcC
Confidence 99999999999999999999 99999999999999999999999999998 689999999999999999999999996 5
Q ss_pred CeEEEecChhH----HHHHHHhcC-CCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHH
Q 000628 420 GQIVYQGPRDN----VLEFFEHMG-FKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIA 494 (1383)
Q Consensus 420 G~iv~~G~~~~----~~~~f~~lG-f~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (1383)
|+.||.||..+ +++||++.| .+||...|||||+.|+.+...+.. ...++++.|+++..++++.
T Consensus 1008 GqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 1008 GQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred CeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHHHH
Confidence 89999999754 667999987 899999999999999987643221 1237899999999888877
Q ss_pred hhhcCCCCcccC-CCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCc
Q 000628 495 SDLRVPYDKSQA-HPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGG 573 (1383)
Q Consensus 495 ~~l~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~ 573 (1383)
+++..-.+..+. ........+|..+.|.|++.|++|+++..||++.....|++..++.++++|..||+.+. +.++.
T Consensus 1076 e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~l 1152 (1391)
T KOG0065|consen 1076 ELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGL 1152 (1391)
T ss_pred HHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHH
Confidence 665432221111 22334456688999999999999999999999999999999999999999999999883 45566
Q ss_pred cchhHHHHHHHHHHHHHH-HHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchH
Q 000628 574 SRYFGALFFSLLNIMFNG-FAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAA 652 (1383)
Q Consensus 574 ~~~~g~lff~l~~~~~~~-~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 652 (1383)
++.++++|.+++....+. -........++-+++|||..+.|+..+|+++..++++|+.++.+++|.+++|+++||...+
T Consensus 1153 qn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a 1232 (1391)
T KOG0065|consen 1153 QNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTA 1232 (1391)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhH
Confidence 778888888776554332 2234455568889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHH
Q 000628 653 SRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLV 732 (1383)
Q Consensus 653 ~~f~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 732 (1383)
.+++.+++..+........++.++.+++|+...|..+.+++..++.+|+|+++|+..||.||+|+||+||+.|..++++.
T Consensus 1233 ~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~ 1312 (1391)
T KOG0065|consen 1233 SKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLIS 1312 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHH
Confidence 99999988888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccCCCCCC----CccccccchhhcccC
Q 000628 733 NEFLGGRWDAQNKDPS----INQPTIGKVLLKIRG 763 (1383)
Q Consensus 733 nef~~~~~~~~~~~~~----~~~~~~G~~~l~~~~ 763 (1383)
..+++..-.|...+.. .+..+.|+.+...++
T Consensus 1313 ~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~ 1347 (1391)
T KOG0065|consen 1313 SQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFG 1347 (1391)
T ss_pred HHhCCCceeeecCCccccCCCCCcCHHHHHHHHhc
Confidence 9998776555432211 123456666555555
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=9.5e-67 Score=711.14 Aligned_cols=212 Identities=24% Similarity=0.303 Sum_probs=178.2
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 46999999987741 12359999999999999999999999999999999999766 347999999998
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000628 933 KNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1383)
Q Consensus 933 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1383)
+.. ..+|+.++||||++.++.. |++|||.+.. +. .++.++++++..++.+. .|+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 653 5678899999999999875 9999996531 11 23447888888887543 34555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
..+||||||||+||||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999985 4899999999975 5678999999985
Q ss_pred CcEEEEecCCC
Q 000628 1083 GGRVIYAGPLG 1093 (1383)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1383)
|++++.|++.
T Consensus 1448 -G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 -GRVVEFDTPE 1457 (1622)
T ss_pred -CEEEEeCCHH
Confidence 8999999864
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.6e-66 Score=707.81 Aligned_cols=212 Identities=22% Similarity=0.283 Sum_probs=177.8
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++|+|+++.++. +.+.+|+|||++|+|||.+||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 36899999988731 12459999999999999999999999999999999999766 347999999998
Q ss_pred CC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000628 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1383)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1383)
+. ...+|+.++||||++.+++. |++|||.+.. +.+ ++.++++++..++.+.. |+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 64 35678899999999999875 9999996531 122 33478888888886542 4455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
..+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....||++++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 5899999999974 5678999999985
Q ss_pred CcEEEEecCCC
Q 000628 1083 GGRVIYAGPLG 1093 (1383)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1383)
|++++.|++.
T Consensus 1445 -G~ivE~Gt~~ 1454 (1495)
T PLN03232 1445 -GQVLEYDSPQ 1454 (1495)
T ss_pred -CEEEEECCHH
Confidence 8999999863
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.9e-65 Score=606.68 Aligned_cols=474 Identities=27% Similarity=0.345 Sum_probs=357.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC-CCceeEEEECCeeCCCCCC-------cceEEEecCCC-
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-LRASGKITYCGHELNEFVP-------QRTCAYISQHD- 254 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~- 254 (1383)
..+++||||++.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 56999999999999999999999999999999999999876 4568999999997654432 26799999996
Q ss_pred -CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccc
Q 000628 255 -LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADT 333 (1383)
Q Consensus 255 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 333 (1383)
.+.|-+||.+.|.-..+.++... ..+....+.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 45667899988876544433211 01112345678999999987655
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
+...+.|||||||||.||+||+.+|++|++||||++||+.++.+|.+.|+++.++.+.+++++. |...-+.++||+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~IT-HDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFIT-HDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEc-CCHHHHHHhcCe
Confidence 4456779999999999999999999999999999999999999999999999988777666654 555678899999
Q ss_pred EEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhH
Q 000628 414 IILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQI 493 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (1383)
|+||++|++++.|+.+++.+. |. .||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p~-------------------------hpYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------PQ-------------------------HPYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------cC-------------------------CcccH-----------------HH
Confidence 999999999999999998641 11 01100 00
Q ss_pred HhhhcCCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCc
Q 000628 494 ASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGG 573 (1383)
Q Consensus 494 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~ 573 (1383)
.+. .|. ...
T Consensus 255 l~a--~p~--------------------------------------------------------------------~~~- 263 (539)
T COG1123 255 LAA--VPR--------------------------------------------------------------------LGD- 263 (539)
T ss_pred Hhh--CCC--------------------------------------------------------------------ccc-
Confidence 000 000 000
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHH
Q 000628 574 SRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAAS 653 (1383)
Q Consensus 574 ~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 653 (1383)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHH
Q 000628 654 RFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVN 733 (1383)
Q Consensus 654 ~f~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~n 733 (1383)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCCccccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchh
Q 000628 734 EFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEK 813 (1383)
Q Consensus 734 ef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 813 (1383)
..... .
T Consensus 264 ------~~~~~-~------------------------------------------------------------------- 269 (539)
T COG1123 264 ------EKIIR-L------------------------------------------------------------------- 269 (539)
T ss_pred ------ccccc-c-------------------------------------------------------------------
Confidence 00000 0
Q ss_pred hhccCccccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCC
Q 000628 814 QRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPG 893 (1383)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G 893 (1383)
.... . .+ ...-++++|++-.+..+.... ....+...+++||||.+++|
T Consensus 270 --------------~~~~-----~----------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~G 317 (539)
T COG1123 270 --------------PRRG-----P----------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREG 317 (539)
T ss_pred --------------cccc-----c----------cc-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCC
Confidence 0000 0 00 001234444433332211000 00012356999999999999
Q ss_pred eEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC--C---hhcccceEEEEccCCC--CCCCCCHHHHHHHHHH
Q 000628 894 VLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK--N---QETFARVSGYCEQNDI--HSPYVTVYESLLYSAW 966 (1383)
Q Consensus 894 e~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~ 966 (1383)
|++||+|+||||||||.++|+|...+ ..|.|.++|.+. + ....++.+-+++||+. +.|.+||++.+.....
T Consensus 318 E~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~ 395 (539)
T COG1123 318 ETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLR 395 (539)
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHh
Confidence 99999999999999999999998764 479999999762 1 1234567888888874 7899999999987654
Q ss_pred hhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHH
Q 000628 967 LRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1045 (1383)
Q Consensus 967 l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i 1045 (1383)
.... ....++++++.++++.++|.. ..+++ +..||||||||++|||||+.+|++|++|||||.||+..+..|
T Consensus 396 ~~~~--~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~V 468 (539)
T COG1123 396 IHGG--GSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQV 468 (539)
T ss_pred hhcc--cchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHH
Confidence 4332 225666778999999999985 45665 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1046 MRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1046 ~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
.++|+++.++ |.|.|++|||.+ -+...||++++|.+ |++++.||.
T Consensus 469 lnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 469 LNLLKDLQEELGLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred HHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 9999999866 999999999986 36678999999985 899999974
No 19
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=5.5e-65 Score=687.65 Aligned_cols=217 Identities=19% Similarity=0.300 Sum_probs=178.3
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc------------
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 920 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g------------ 920 (1383)
..++|+||+|.++.. ++.++|+|+|++|+||+.+||+||||||||||+++|.|..++.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 369999999987521 1246999999999999999999999999999999999965431
Q ss_pred ----------------------------------------eEEEEEEEcCccCC---hhcccceEEEEccCCCCCCCCCH
Q 000628 921 ----------------------------------------YIEGDIKISGYPKN---QETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 921 ----------------------------------------~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
+.+|+|.+||.++. ...+|+.+|||+|++.++ ..|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccH
Confidence 14799999999864 456788999999999987 5799
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-------cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-------LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1383)
+|||.|+. .+.+. +.++++++..++.+ -.|+.+|.. ...||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~-----~~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999862 12332 23667777766644 347777754 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhhceEEEEecC---cE-EEEecCC
Q 000628 1031 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRG---GR-VIYAGPL 1092 (1383)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g---G~-~~~~g~~ 1092 (1383)
|||||+||+.+++.|++.|+++. .+++|+|+++|+++ ..+.+|++++|+++ |+ +++.|+.
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 35899999999974 67889999999862 66 5588874
No 20
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.2e-63 Score=682.47 Aligned_cols=212 Identities=21% Similarity=0.230 Sum_probs=178.0
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++|+|+++.++.. ...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 469999999887421 1359999999999999999999999999999999999765 347999999998
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000628 933 KNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1383)
Q Consensus 933 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1383)
+.. ..+|+.++||||++.+++. |++|||.... +.+ ++.++++++..++.+. .|+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 653 5678899999999999986 9999995211 122 3347888888888654 35555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
..+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|++ +....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl--~ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRL--NTIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCH--HHHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 589999999996 46778999999985
Q ss_pred CcEEEEecCCC
Q 000628 1083 GGRVIYAGPLG 1093 (1383)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1383)
|++++.|++.
T Consensus 1495 -G~IvE~G~~~ 1504 (1522)
T TIGR00957 1495 -GEVAEFGAPS 1504 (1522)
T ss_pred -CEEEEECCHH
Confidence 8999999863
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-64 Score=624.70 Aligned_cols=460 Identities=23% Similarity=0.327 Sum_probs=347.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
+++|+|||+++++|++++|+||||||||||+++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 46999999999999999999999999999999999999861 128999999998865432 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.|+......+. .+ .. +....++.+++.+||++..++.+++
T Consensus 97 ~tv~e~l~~~~~~~~~~~-~~------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (506)
T PRK13549 97 LSVLENIFLGNEITPGGI-MD------YD------------------------AMYLRAQKLLAQLKLDINPATPVGN-- 143 (506)
T ss_pred CcHHHHhhhcccccccCC-cC------HH------------------------HHHHHHHHHHHHcCCCCCcccchhh--
Confidence 999999988643211000 00 00 0011356688999998888888877
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ .+.|+|++.| ...++.++||+|++|++
T Consensus 144 ---LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvi~~tH-~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 144 ---LGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-HGIACIYISH-KLNEVKAISDTICVIRD 218 (506)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeC-cHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999999999999999999999975 4667776655 45578889999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000628 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1383)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 499 (1383)
|++++.|+.+++.. .+.. +.+
T Consensus 219 G~i~~~~~~~~~~~---------------~~~~-----------------------------~~~--------------- 239 (506)
T PRK13549 219 GRHIGTRPAAGMTE---------------DDII-----------------------------TMM--------------- 239 (506)
T ss_pred CEEeeecccccCCH---------------HHHH-----------------------------HHh---------------
Confidence 99998876543210 0000 000
Q ss_pred CCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhHH
Q 000628 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1383)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1383)
. + . ..
T Consensus 240 -------------------------------------------------------------~--~--~-~~--------- 244 (506)
T PRK13549 240 -------------------------------------------------------------V--G--R-EL--------- 244 (506)
T ss_pred -------------------------------------------------------------h--C--c-Cc---------
Confidence 0 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 000628 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1383)
Q Consensus 580 lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 659 (1383)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCc
Q 000628 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1383)
Q Consensus 660 l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 739 (1383)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchhhhccCc
Q 000628 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1383)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1383)
. . . + +
T Consensus 245 ------~----~------~-----~---------------------------------~--------------------- 249 (506)
T PRK13549 245 ------T----A------L-----Y---------------------------------P--------------------- 249 (506)
T ss_pred ------c----c------c-----c---------------------------------c---------------------
Confidence 0 0 0 0 0
Q ss_pred cccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEe
Q 000628 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1383)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1383)
. +.. . . ....++++|+++.++. .+++.+|+||||+|++||++||+
T Consensus 250 ------~--~~~---~------~--------~~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~~l~ 294 (506)
T PRK13549 250 ------R--EPH---T------I--------GEVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEILGIA 294 (506)
T ss_pred ------c--ccc---C------C--------CCceEEEecCcccccc----------ccccccccceeeEEcCCcEEEEe
Confidence 0 000 0 0 0012456666643310 01235999999999999999999
Q ss_pred ccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHHHHHHhhcCC-
Q 000628 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAWLRLSS- 971 (1383)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~l~~~~- 971 (1383)
||||||||||+++|+|...+ +.+|+|.++|.+... ...++.+||++|++ .+++.+||.||+.+........
T Consensus 295 G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 373 (506)
T PRK13549 295 GLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGG 373 (506)
T ss_pred CCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccC
Confidence 99999999999999997541 137999999976532 12345689999995 4678899999998753211110
Q ss_pred -CCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHH
Q 000628 972 -DVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV 1049 (1383)
Q Consensus 972 -~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l 1049 (1383)
....++..+.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..+++.|
T Consensus 374 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l 448 (506)
T PRK13549 374 SRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLI 448 (506)
T ss_pred cccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHH
Confidence 012233445689999999996 4666664 479999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1050 RNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1050 ~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
++++++|+|||++||+++ ++.+.||++++|.+ |+++..|+..+
T Consensus 449 ~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 449 NQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred HHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 999888999999999976 57788999999985 88998887654
No 22
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=8e-64 Score=621.70 Aligned_cols=450 Identities=22% Similarity=0.340 Sum_probs=345.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999987 9999999998754321 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.|+.......... ... +....++.+++.+||++..|..+++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 141 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRI------DWK------------------------KMYAEADKLLARLNLRFSSDKLVGE-- 141 (501)
T ss_pred CcHHHHhhhccccccccCcc------CHH------------------------HHHHHHHHHHHHcCCCCCccCchhh--
Confidence 99999999864321000000 000 0011346688999999888888887
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++. +.|+|++.| ...++.++||+|++|++
T Consensus 142 ---LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~-~~tvii~sH-d~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 142 ---LSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQ-GRGIVYISH-RLKEIFEICDDVTVFRD 216 (501)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeC-CHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999998753 667666655 45688899999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000628 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1383)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 499 (1383)
|+++..|+.+++.. .+ ..+.+
T Consensus 217 G~i~~~~~~~~~~~---------------~~-----------------------------~~~~~--------------- 237 (501)
T PRK10762 217 GQFIAEREVADLTE---------------DS-----------------------------LIEMM--------------- 237 (501)
T ss_pred CEEEEecCcCcCCH---------------HH-----------------------------HHHHh---------------
Confidence 99998776543210 00 00000
Q ss_pred CCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhHH
Q 000628 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1383)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1383)
+
T Consensus 238 -------------------------------------------------------------~------------------ 238 (501)
T PRK10762 238 -------------------------------------------------------------V------------------ 238 (501)
T ss_pred -------------------------------------------------------------c------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 000628 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1383)
Q Consensus 580 lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 659 (1383)
+
T Consensus 239 -------------------------------------------------------------------~------------ 239 (501)
T PRK10762 239 -------------------------------------------------------------------G------------ 239 (501)
T ss_pred -------------------------------------------------------------------C------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCc
Q 000628 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1383)
Q Consensus 660 l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 739 (1383)
.+
T Consensus 240 ------------------------------------------------------------------------------~~ 241 (501)
T PRK10762 240 ------------------------------------------------------------------------------RK 241 (501)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred cccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchhhhccCc
Q 000628 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1383)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1383)
.....+.
T Consensus 242 ~~~~~~~------------------------------------------------------------------------- 248 (501)
T PRK10762 242 LEDQYPR------------------------------------------------------------------------- 248 (501)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 0000000
Q ss_pred cccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEe
Q 000628 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1383)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1383)
. . . + + .+..++++|++. .+|+|+||++++||++||+
T Consensus 249 -----------~---~--~---~------~-~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~li 284 (501)
T PRK10762 249 -----------L---D--K---A------P-GEVRLKVDNLSG------------------PGVNDVSFTLRKGEILGVS 284 (501)
T ss_pred -----------c---c--c---C------C-CCcEEEEeCccc------------------CCcccceEEEcCCcEEEEe
Confidence 0 0 0 0 0 001245666541 2699999999999999999
Q ss_pred ccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHHHHHHhhcCC-
Q 000628 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAWLRLSS- 971 (1383)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~l~~~~- 971 (1383)
||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++ .+++.+||.|++.+........
T Consensus 285 G~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 362 (501)
T PRK10762 285 GLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRA 362 (501)
T ss_pred cCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhccc
Confidence 99999999999999997653 47999999976532 12345799999996 4778899999998753211100
Q ss_pred --CCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHH
Q 000628 972 --DVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1048 (1383)
Q Consensus 972 --~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~ 1048 (1383)
....++.++.++++++.++|. +..++.+ ..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.
T Consensus 363 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 437 (501)
T PRK10762 363 GGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQL 437 (501)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHH
Confidence 012233345688999999995 5666664 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1049 VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1049 l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
|++++++|+|||++||+++ ++.+.||++++|.+ |+++..|+..+
T Consensus 438 l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 438 INQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred HHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 9999878999999999986 57788999999985 88998888654
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-64 Score=624.39 Aligned_cols=458 Identities=21% Similarity=0.295 Sum_probs=345.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 46999999999999999999999999999999999999887 8999999998865432 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.++...... .+ +... .+.+ +....++.+++.+||++..++.+++
T Consensus 95 ~tv~e~l~~~~~~~~~--~~-------------~~~~-~~~~-----------~~~~~~~~~l~~~gl~~~~~~~~~~-- 145 (510)
T PRK09700 95 LTVLENLYIGRHLTKK--VC-------------GVNI-IDWR-----------EMRVRAAMMLLRVGLKVDLDEKVAN-- 145 (510)
T ss_pred CcHHHHhhhccccccc--cc-------------cccc-cCHH-----------HHHHHHHHHHHHcCCCCCcccchhh--
Confidence 9999999875321000 00 0000 0000 0112356688999999888888877
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++. +.|+|++.| ...++.++||+|++|++
T Consensus 146 ---LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tiiivsH-d~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 146 ---LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE-GTAIVYISH-KLAEIRRICDRYTVMKD 220 (510)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEeC-CHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999764 677666654 55678889999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000628 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1383)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 499 (1383)
|++++.|+++++.. .+.. +..
T Consensus 221 G~i~~~g~~~~~~~---------------~~~~-----------------------------~~~--------------- 241 (510)
T PRK09700 221 GSSVCSGMVSDVSN---------------DDIV-----------------------------RLM--------------- 241 (510)
T ss_pred CEEeeecchhhCCH---------------HHHH-----------------------------HHh---------------
Confidence 99999887754310 0000 000
Q ss_pred CCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhHH
Q 000628 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1383)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1383)
... ...
T Consensus 242 -------------------------------------------------------------~~~-----~~~-------- 247 (510)
T PRK09700 242 -------------------------------------------------------------VGR-----ELQ-------- 247 (510)
T ss_pred -------------------------------------------------------------cCC-----Ccc--------
Confidence 000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 000628 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1383)
Q Consensus 580 lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 659 (1383)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCc
Q 000628 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1383)
Q Consensus 660 l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 739 (1383)
+ .+
T Consensus 248 ----------------------------------------------~---------------------------~~---- 250 (510)
T PRK09700 248 ----------------------------------------------N---------------------------RF---- 250 (510)
T ss_pred ----------------------------------------------c---------------------------cc----
Confidence 0 00
Q ss_pred cccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchhhhccCc
Q 000628 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1383)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1383)
.. .
T Consensus 251 -----~~----~-------------------------------------------------------------------- 253 (510)
T PRK09700 251 -----NA----M-------------------------------------------------------------------- 253 (510)
T ss_pred -----cc----c--------------------------------------------------------------------
Confidence 00 0
Q ss_pred cccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEe
Q 000628 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1383)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1383)
.+.. . .. . .+..++++|++... ..+|+|||++|++||+++|+
T Consensus 254 --------~~~~---~-~~---~--------~~~~l~~~~l~~~~---------------~~~l~~isl~i~~Ge~~~l~ 295 (510)
T PRK09700 254 --------KENV---S-NL---A--------HETVFEVRNVTSRD---------------RKKVRDISFSVCRGEILGFA 295 (510)
T ss_pred --------cccc---c-cC---C--------CCcEEEEeCccccC---------------CCcccceeEEEcCCcEEEEE
Confidence 0000 0 00 0 01135677766321 12899999999999999999
Q ss_pred ccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccC---CCCCCCCCHHHHHHHHHHhh---c
Q 000628 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQN---DIHSPYVTVYESLLYSAWLR---L 969 (1383)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~~lTv~E~l~f~~~l~---~ 969 (1383)
||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|+ ..+++.+||.||+.+....+ .
T Consensus 296 G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 373 (510)
T PRK09700 296 GLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGY 373 (510)
T ss_pred CCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccc
Confidence 99999999999999997653 47999999976532 1234579999998 45788999999998753211 0
Q ss_pred CC--C-CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHH
Q 000628 970 SS--D-VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1045 (1383)
Q Consensus 970 ~~--~-~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i 1045 (1383)
.. . ......++.++++++.++|. +..++.+ ..|||||||||+|||+|+.+|+||||||||+|||+.++..+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l 448 (510)
T PRK09700 374 KGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEI 448 (510)
T ss_pred cccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHH
Confidence 00 0 11222335678999999996 6667764 47999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1046 MRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1046 ~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
++.|++++++|.|||++||++. ++...||++++|.+ |+++..++.
T Consensus 449 ~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 449 YKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 9999999878999999999986 57788999999985 788887764
No 24
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-63 Score=628.97 Aligned_cols=488 Identities=21% Similarity=0.235 Sum_probs=351.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCC----------CC------C-cce
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE----------FV------P-QRT 246 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~----------~~------~-~~~ 246 (1383)
.++|+|||+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|..++. .. . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999887 8999999975421 01 1 246
Q ss_pred EEEecCCC--CCCCCCCHHHHHHHhhhcc-CCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHH
Q 000628 247 CAYISQHD--LHHGEMTVRETLDFSGRCL-GVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLK 323 (1383)
Q Consensus 247 ~~yv~Q~~--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (1383)
+|||+|++ .+++.+||+||+.++.+.. +.. +. +....++.+++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------RE------------------------EAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHH
Confidence 99999997 6788899999999875431 110 00 01123567889
Q ss_pred HcCCcc---cccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEE
Q 000628 324 ILGLDI---CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVAL 400 (1383)
Q Consensus 324 ~lgL~~---~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~ 400 (1383)
.+||++ ..+..+.+ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++..+.|+|++.
T Consensus 152 ~~gL~~~~~~~~~~~~~-----LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~it 226 (623)
T PRK10261 152 QVRIPEAQTILSRYPHQ-----LSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFIT 226 (623)
T ss_pred HCCCCChhhHHhCCCcc-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 999964 45677766 9999999999999999999999999999999999999999999999865567766654
Q ss_pred ecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHH
Q 000628 401 LQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDF 480 (1383)
Q Consensus 401 ~q~~~~~~~~~D~i~lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 480 (1383)
|...++.++||+|++|++|++++.|+++++.+ .|.+.-..+++..+
T Consensus 227 -Hdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~~~------------------------- 272 (623)
T PRK10261 227 -HDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLAAV------------------------- 272 (623)
T ss_pred -CCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhhcc-------------------------
Confidence 55668889999999999999999998876531 00000000000000
Q ss_pred HHHHHhCccchhHHhhhcCCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhh
Q 000628 481 VEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVY 560 (1383)
Q Consensus 481 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf 560 (1383)
+.
T Consensus 273 -------------------~~----------------------------------------------------------- 274 (623)
T PRK10261 273 -------------------PQ----------------------------------------------------------- 274 (623)
T ss_pred -------------------Cc-----------------------------------------------------------
Confidence 00
Q ss_pred hcccCCcCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHH
Q 000628 561 FRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVA 640 (1383)
Q Consensus 561 ~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~ 640 (1383)
.....+. .
T Consensus 275 ------~~~~~~~------------------------------------~------------------------------ 282 (623)
T PRK10261 275 ------LGAMKGL------------------------------------D------------------------------ 282 (623)
T ss_pred ------ccccccc------------------------------------c------------------------------
Confidence 0000000 0
Q ss_pred HHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHH
Q 000628 641 LTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYI 720 (1383)
Q Consensus 641 i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~i 720 (1383)
.+. ..+.
T Consensus 283 ----------------------------------------------------------------~~~-~~~~-------- 289 (623)
T PRK10261 283 ----------------------------------------------------------------YPR-RFPL-------- 289 (623)
T ss_pred ----------------------------------------------------------------CCc-cccc--------
Confidence 000 0000
Q ss_pred cHHHHHHHHHHHHHhcCCccccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 000628 721 SPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIG 800 (1383)
Q Consensus 721 sp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~ 800 (1383)
-....+. .
T Consensus 290 -------------------~~~~~~~----~------------------------------------------------- 297 (623)
T PRK10261 290 -------------------ISLEHPA----K------------------------------------------------- 297 (623)
T ss_pred -------------------ccccccc----c-------------------------------------------------
Confidence 0000000 0
Q ss_pred CCCceeecccchhhhccCccccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccc
Q 000628 801 DSNSTVIEEDGEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRL 880 (1383)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (1383)
. . +.. . ... . +.....++++|+++.++..... .......+
T Consensus 298 -------------~------------~-~~~---~-~~~--~------~~~~~~L~~~~l~~~y~~~~~~--~~~~~~~~ 337 (623)
T PRK10261 298 -------------Q------------E-PPI---E-QDT--V------VDGEPILQVRNLVTRFPLRSGL--LNRVTREV 337 (623)
T ss_pred -------------c------------C-ccc---c-ccc--c------cCCCceEEEeeeEEEEcCCCcc--ccccCCce
Confidence 0 0 000 0 000 0 0001136788887765321000 00000124
Q ss_pred eEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hcccceEEEEccCC--CCC
Q 000628 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQND--IHS 952 (1383)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~ 952 (1383)
.+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.++|++|++ .++
T Consensus 338 ~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~ 415 (623)
T PRK10261 338 HAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLD 415 (623)
T ss_pred EEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcC
Confidence 69999999999999999999999999999999999765 347999999986532 12456799999997 588
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000628 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1383)
Q Consensus 953 ~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1383)
+.+||.|++.+....+. ....++.++++.++++.++|. +..++. +..|||||||||+|||||+.+|+|||||
T Consensus 416 ~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAraL~~~p~llllD 488 (623)
T PRK10261 416 PRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARALALNPKVIIAD 488 (623)
T ss_pred CCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 89999999987643321 112334456789999999995 456665 4579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
|||+|||+.++..++++|++++++ |.|||++||+++ .+...||++++|.+ |++++.|+..
T Consensus 489 EPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~ 549 (623)
T PRK10261 489 EAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRR 549 (623)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999999999765 899999999976 56778999999975 8999998853
No 25
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.5e-63 Score=616.26 Aligned_cols=453 Identities=21% Similarity=0.284 Sum_probs=343.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999999987 9999999998764332 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.|..... + + ....++.+++.+||++..++.+++
T Consensus 101 ~tv~e~l~~~~~~~------~---~-----------------------------~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (510)
T PRK15439 101 LSVKENILFGLPKR------Q---A-----------------------------SMQKMKQLLAALGCQLDLDSSAGS-- 140 (510)
T ss_pred CcHHHHhhcccccc------h---H-----------------------------HHHHHHHHHHHcCCCccccCChhh--
Confidence 99999998752100 0 0 011245678899999888888877
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.|+|++.| ...++.++||+|++|++
T Consensus 141 ---LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-g~tiiivtH-d~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 141 ---LEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQ-GVGIVFISH-KLPEIRQLADRISVMRD 215 (510)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeC-CHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998763 667666655 45578899999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000628 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1383)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 499 (1383)
|++++.|+++++... +.. +.+..
T Consensus 216 G~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~~------------- 238 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------DII-----------------------------QAITP------------- 238 (510)
T ss_pred CEEEEecChHHcCHH---------------HHH-----------------------------HHHhC-------------
Confidence 999999987664210 000 00000
Q ss_pred CCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhHH
Q 000628 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1383)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1383)
.. .. ......
T Consensus 239 ---~~-~~------------------------------------------------------------~~~~~~------ 248 (510)
T PRK15439 239 ---AA-RE------------------------------------------------------------KSLSAS------ 248 (510)
T ss_pred ---cc-cc------------------------------------------------------------cccccc------
Confidence 00 00 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 000628 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1383)
Q Consensus 580 lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 659 (1383)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCc
Q 000628 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1383)
Q Consensus 660 l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 739 (1383)
. .
T Consensus 249 ---------------------------------------------------~---------------------------~ 250 (510)
T PRK15439 249 ---------------------------------------------------Q---------------------------K 250 (510)
T ss_pred ---------------------------------------------------c---------------------------c
Confidence 0 0
Q ss_pred cccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchhhhccCc
Q 000628 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1383)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1383)
.. . .+
T Consensus 251 ~~----~----------------~~------------------------------------------------------- 255 (510)
T PRK15439 251 LW----L----------------EL------------------------------------------------------- 255 (510)
T ss_pred cc----c----------------cc-------------------------------------------------------
Confidence 00 0 00
Q ss_pred cccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEe
Q 000628 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1383)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1383)
+.. .. .. + ..+..+.++|++. .+|+|||+++++||++||+
T Consensus 256 ---------~~~---~~-~~--~-------~~~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~ 295 (510)
T PRK15439 256 ---------PGN---RR-QQ--A-------AGAPVLTVEDLTG------------------EGFRNISLEVRAGEILGLA 295 (510)
T ss_pred ---------ccc---cc-cc--C-------CCCceEEEeCCCC------------------CCccceeEEEcCCcEEEEE
Confidence 000 00 00 0 0011256666651 1599999999999999999
Q ss_pred ccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh----cccceEEEEccCC---CCCCCCCHHHHHHHHHHhhcCCC
Q 000628 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE----TFARVSGYCEQND---IHSPYVTVYESLLYSAWLRLSSD 972 (1383)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~l~~~~~ 972 (1383)
||||||||||+++|+|...+ .+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++......+....
T Consensus 296 G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~ 373 (510)
T PRK15439 296 GVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFW 373 (510)
T ss_pred CCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccc
Confidence 99999999999999997553 479999999865321 1245699999984 47888999999864211111100
Q ss_pred CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHH
Q 000628 973 VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN 1051 (1383)
Q Consensus 973 ~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~ 1051 (1383)
......++.++++++.++|. +..++.+ +.|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++
T Consensus 374 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~ 448 (510)
T PRK15439 374 IKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRS 448 (510)
T ss_pred cChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHH
Confidence 11122345688999999997 6667664 57999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1052 TVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1052 ~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
++++|.|||++||+++ ++.+.||++++|.+ |++++.|..+
T Consensus 449 l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 449 IAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred HHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 9888999999999986 57788999999974 8999888664
No 26
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.4e-63 Score=619.02 Aligned_cols=464 Identities=21% Similarity=0.275 Sum_probs=344.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CceeEEEECCeeCCCCCC-------cceEEEecCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEFVP-------QRTCAYISQHD 254 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~ 254 (1383)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 469999999999999999999999999999999999998621 138999999998754321 24699999997
Q ss_pred C--CCCCCCHHHHHHHhhhcc-CCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc--
Q 000628 255 L--HHGEMTVRETLDFSGRCL-GVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI-- 329 (1383)
Q Consensus 255 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-- 329 (1383)
. +++.+||+|++.+..... +.. +. +....++.+++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------RE------------------------AARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHCCCCChH
Confidence 4 567789999987642211 100 00 01123567888999975
Q ss_pred -cccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHH
Q 000628 330 -CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETY 408 (1383)
Q Consensus 330 -~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~ 408 (1383)
..++.+++ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++.|+ ..++.
T Consensus 148 ~~~~~~~~~-----LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd-~~~~~ 221 (529)
T PRK15134 148 KRLTDYPHQ-----LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHN-LSIVR 221 (529)
T ss_pred HHHhhCCcc-----cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCc-HHHHH
Confidence 35777776 999999999999999999999999999999999999999999999876556777776655 45778
Q ss_pred hhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCc
Q 000628 409 DLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFH 488 (1383)
Q Consensus 409 ~~~D~i~lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (1383)
++||+|++|++|++++.|+++++.+. +.. .+ .
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~----~~-----------------------------~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH----PY-----------------------------T------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC----HH-----------------------------H-------
Confidence 89999999999999999987665310 000 00 0
Q ss_pred cchhHHhhhcCCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcC
Q 000628 489 MGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVG 568 (1383)
Q Consensus 489 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~ 568 (1383)
+.+ +...
T Consensus 254 -----------------------------------------~~~----------------------------~~~~---- 260 (529)
T PRK15134 254 -----------------------------------------QKL----------------------------LNSE---- 260 (529)
T ss_pred -----------------------------------------HHH----------------------------HHhC----
Confidence 000 0000
Q ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCC
Q 000628 569 DMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGY 648 (1383)
Q Consensus 569 ~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~ 648 (1383)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHH
Q 000628 649 DPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQT 728 (1383)
Q Consensus 649 ~~~~~~f~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~ 728 (1383)
+
T Consensus 261 --------------------------------------------------------------~----------------- 261 (529)
T PRK15134 261 --------------------------------------------------------------P----------------- 261 (529)
T ss_pred --------------------------------------------------------------c-----------------
Confidence 0
Q ss_pred HHHHHHhcCCccccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeec
Q 000628 729 SLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIE 808 (1383)
Q Consensus 729 al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~ 808 (1383)
. ..+. .
T Consensus 262 ----------~---~~~~----~--------------------------------------------------------- 267 (529)
T PRK15134 262 ----------S---GDPV----P--------------------------------------------------------- 267 (529)
T ss_pred ----------c---cccc----c---------------------------------------------------------
Confidence 0 0000 0
Q ss_pred ccchhhhccCccccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceee
Q 000628 809 EDGEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSG 888 (1383)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 888 (1383)
.. . . .+..++++|+++.++.... ..+...+.+.+|+|||+
T Consensus 268 --------------------------~~-~---~--------~~~~l~~~~l~~~~~~~~~--~~~~~~~~~~il~~isl 307 (529)
T PRK15134 268 --------------------------LP-E---P--------ASPLLDVEQLQVAFPIRKG--ILKRTVDHNVVVKNISF 307 (529)
T ss_pred --------------------------cC-C---C--------CCCcccccCcEEEeecCcc--ccccccccceeeeccee
Confidence 00 0 0 0001345555544321000 00000012469999999
Q ss_pred EEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---h---cccceEEEEccCC--CCCCCCCHHHH
Q 000628 889 VFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---E---TFARVSGYCEQND--IHSPYVTVYES 960 (1383)
Q Consensus 889 ~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~---~~~~~~gyv~Q~~--~~~~~lTv~E~ 960 (1383)
+|++||++||+||||||||||+++|+|... .+|+|.++|.++.. . .+++.+||++|++ .+++.+||.||
T Consensus 308 ~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~ 384 (529)
T PRK15134 308 TLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQI 384 (529)
T ss_pred EEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHH
Confidence 999999999999999999999999999753 37999999976532 1 1346799999997 47788999999
Q ss_pred HHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000628 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1383)
Q Consensus 961 l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1383)
+.+....+.. .....+.++.++++++.++|. +..++. +..|||||||||+||++|+.+|++|||||||+|||+
T Consensus 385 l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~ 458 (529)
T PRK15134 385 IEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDK 458 (529)
T ss_pred HHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCH
Confidence 9886533211 122334456688999999996 456665 457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1040 RAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1040 ~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
.++..+++.|++++++ |+|||++||+++ ++.+.||++++|.+ |+++..|+.
T Consensus 459 ~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 459 TVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 9999999999999865 899999999975 56778999999985 789988874
No 27
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.7e-62 Score=666.93 Aligned_cols=211 Identities=23% Similarity=0.262 Sum_probs=177.8
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..+.|+|++++++. +...+|+||||+|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999987742 12359999999999999999999999999999999999766 347999999998
Q ss_pred CC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000628 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1383)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1383)
+. ...+|+.+|||||++.++.. |++|||... .+.+ ++.++++++.+++.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 64 35678899999999999875 999999531 1222 3458889999988664 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1003 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~-p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
..+||||||||++|||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+++|++ +....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl--~ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRL--HTVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccH--HHHHhCCEEEEEE
Confidence 357999999999999999996 89999999999999999999999999875 479999999996 4678899999998
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|++
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 5 899999985
No 28
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=5.9e-63 Score=617.09 Aligned_cols=445 Identities=23% Similarity=0.310 Sum_probs=340.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc--CCCCCceeEEEECC-----------------------eeC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL--GKDLRASGKITYCG-----------------------HEL 238 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~I~~~G-----------------------~~~ 238 (1383)
+++|+|+|+++.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999996 576 89999972 221
Q ss_pred C-------CC------CCcceEEEecCC-CCCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHH
Q 000628 239 N-------EF------VPQRTCAYISQH-DLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFM 304 (1383)
Q Consensus 239 ~-------~~------~~~~~~~yv~Q~-~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~ 304 (1383)
. .. ..++.++||+|+ +.+++.+||+||+.|.....+.. .. +
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~----------~~----------~----- 144 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE----------GK----------E----- 144 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC----------HH----------H-----
Confidence 1 00 113569999997 67888899999998864322110 00 0
Q ss_pred HHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHH
Q 000628 305 KAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKF 384 (1383)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~ 384 (1383)
....++.+++.+||++..+..+++ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.
T Consensus 145 ---------~~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 145 ---------AVGRAVDLIEMVQLSHRITHIARD-----LSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred ---------HHHHHHHHHHHcCChhhhhcCccc-----CCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 012356789999998888888776 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhh
Q 000628 385 LKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQY 464 (1383)
Q Consensus 385 L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~ 464 (1383)
|+++++..+.|+|++.|. ...+.++||+|++|++|++++.|+++++.+.+..
T Consensus 211 l~~l~~~~g~tviivtHd-~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~--------------------------- 262 (520)
T TIGR03269 211 LEEAVKASGISMVLTSHW-PEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFME--------------------------- 262 (520)
T ss_pred HHHHHHhcCcEEEEEeCC-HHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHh---------------------------
Confidence 999976556777766655 4567789999999999999988876543210000
Q ss_pred hhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcCCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHH
Q 000628 465 WFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIF 544 (1383)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~ 544 (1383)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhhcccCCcCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHH
Q 000628 545 KTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIW 624 (1383)
Q Consensus 545 ~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~ 624 (1383)
...
T Consensus 263 ------------------------~~~----------------------------------------------------- 265 (520)
T TIGR03269 263 ------------------------GVS----------------------------------------------------- 265 (520)
T ss_pred ------------------------hch-----------------------------------------------------
Confidence 000
Q ss_pred HHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhc
Q 000628 625 LLRIPISILDSTIWVALTYYTIGYDPAASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFV 704 (1383)
Q Consensus 625 l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~ 704 (1383)
.
T Consensus 266 --------------------------~----------------------------------------------------- 266 (520)
T TIGR03269 266 --------------------------E----------------------------------------------------- 266 (520)
T ss_pred --------------------------h-----------------------------------------------------
Confidence 0
Q ss_pred cccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCccccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHH
Q 000628 705 MAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFL 784 (1383)
Q Consensus 705 i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~ 784 (1383)
+ . .
T Consensus 267 -----~-----------------------------------~----~--------------------------------- 269 (520)
T TIGR03269 267 -----V-----------------------------------E----K--------------------------------- 269 (520)
T ss_pred -----h-----------------------------------c----c---------------------------------
Confidence 0 0 0
Q ss_pred HHHHHHHHHHhcCCCCCCCceeecccchhhhccCccccchhhhhcccccccccccccccCccccccCCcEEEEeccceee
Q 000628 785 FNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFV 864 (1383)
Q Consensus 785 f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~ 864 (1383)
. ... . . ....++++|+++.+
T Consensus 270 -------------------------------~---------~~~------~------~--------~~~~l~~~~l~~~~ 289 (520)
T TIGR03269 270 -------------------------------E---------CEV------E------V--------GEPIIKVRNVSKRY 289 (520)
T ss_pred -------------------------------c---------ccc------C------C--------CCceEEEeccEEEe
Confidence 0 000 0 0 00125666776654
Q ss_pred eccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEc-Ccc---CCh-----
Q 000628 865 DMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKIS-GYP---KNQ----- 935 (1383)
Q Consensus 865 ~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~-g~~---~~~----- 935 (1383)
+.. ..+++.+|+|+||+|++||++||+||||||||||+++|+|... +.+|+|.++ |.+ ...
T Consensus 290 ~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~~ 359 (520)
T TIGR03269 290 ISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPDG 359 (520)
T ss_pred ccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchhh
Confidence 210 0112469999999999999999999999999999999999765 347999996 532 111
Q ss_pred -hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-----cccccccCCCCCCCCH
Q 000628 936 -ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-----LNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 936 -~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~~g~~~~~~LSg 1009 (1383)
...++.+||++|++.+++.+||.|++.+...+. ...+..++.+.++++.++|.+ ..++. +..|||
T Consensus 360 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSg 430 (520)
T TIGR03269 360 RGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSE 430 (520)
T ss_pred HHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCH
Confidence 123456999999998889999999998754321 122333456889999999975 34554 457999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
||||||+||+||+.+|+||||||||+|||+.++..+++.|++++++ |.|||++||+++ .+.+.||++++|.+ |+++.
T Consensus 431 Gq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~ 508 (520)
T TIGR03269 431 GERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVK 508 (520)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999765 899999999986 57778999999975 78888
Q ss_pred ecCC
Q 000628 1089 AGPL 1092 (1383)
Q Consensus 1089 ~g~~ 1092 (1383)
.|+.
T Consensus 509 ~g~~ 512 (520)
T TIGR03269 509 IGDP 512 (520)
T ss_pred ECCH
Confidence 8874
No 29
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.2e-62 Score=611.79 Aligned_cols=459 Identities=22% Similarity=0.294 Sum_probs=342.4
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 46999999999999999999999999999999999998761 128999999998765332 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccc-cccccCc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICA-DTMVGDE 338 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg~~ 338 (1383)
+||+||+.++......+...+ . .+ ....++.+++.+||++.. ++.+++
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~~- 141 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMA------Y----------NA--------------MYLRAKNLLRELQLDADNVTRPVGD- 141 (500)
T ss_pred CcHHHHHHhhccccccccccC------H----------HH--------------HHHHHHHHHHHcCCCCCcccCchhh-
Confidence 999999988643210000000 0 00 011356688999998764 566776
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.| ...++.++||+|++|+
T Consensus 142 ----LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiitH-d~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 142 ----YGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-HGVACVYISH-KLNEVKAVCDTICVIR 215 (500)
T ss_pred ----CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeC-cHHHHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999975 4667666654 5568889999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhc
Q 000628 419 EGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLR 498 (1383)
Q Consensus 419 ~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 498 (1383)
+|++++.|+.+++.. .+ ..+
T Consensus 216 ~G~i~~~~~~~~~~~---------------~~-----------------------------~~~---------------- 235 (500)
T TIGR02633 216 DGQHVATKDMSTMSE---------------DD-----------------------------IIT---------------- 235 (500)
T ss_pred CCeEeeecCcccCCH---------------HH-----------------------------HHH----------------
Confidence 999987654321100 00 000
Q ss_pred CCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhH
Q 000628 499 VPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFG 578 (1383)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g 578 (1383)
+ +.
T Consensus 236 -------------------------------~-----------------------------~~----------------- 238 (500)
T TIGR02633 236 -------------------------------M-----------------------------MV----------------- 238 (500)
T ss_pred -------------------------------H-----------------------------Hh-----------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Q 000628 579 ALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQ 658 (1383)
Q Consensus 579 ~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 658 (1383)
+.
T Consensus 239 --------------------------------------------------------------------~~---------- 240 (500)
T TIGR02633 239 --------------------------------------------------------------------GR---------- 240 (500)
T ss_pred --------------------------------------------------------------------Cc----------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCC
Q 000628 659 FLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGG 738 (1383)
Q Consensus 659 ~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 738 (1383)
+ .+
T Consensus 241 -----------------------------------------------~---~~--------------------------- 243 (500)
T TIGR02633 241 -----------------------------------------------E---IT--------------------------- 243 (500)
T ss_pred -----------------------------------------------c---cc---------------------------
Confidence 0 00
Q ss_pred ccccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchhhhccC
Q 000628 739 RWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASG 818 (1383)
Q Consensus 739 ~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1383)
. . +
T Consensus 244 -------~----~------------~------------------------------------------------------ 246 (500)
T TIGR02633 244 -------S----L------------Y------------------------------------------------------ 246 (500)
T ss_pred -------c----c------------c------------------------------------------------------
Confidence 0 0 0
Q ss_pred ccccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEE
Q 000628 819 HEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTAL 898 (1383)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al 898 (1383)
+.. .. +. .+..++++|+++.+.. .+++.+|+|+||++++||++||
T Consensus 247 ----------~~~--~~------~~-------~~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~~~l 291 (500)
T TIGR02633 247 ----------PHE--PH------EI-------GDVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEILGV 291 (500)
T ss_pred ----------ccc--cc------CC-------CCceEEEeCCcccccc----------cccccccccceeEEeCCcEEEE
Confidence 000 00 00 0012566676643210 0123589999999999999999
Q ss_pred eccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHHHHHH--hhc
Q 000628 899 MGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAW--LRL 969 (1383)
Q Consensus 899 ~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~--l~~ 969 (1383)
+|||||||||||++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .+++.+||+||+.+... ...
T Consensus 292 ~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~ 370 (500)
T TIGR02633 292 AGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCF 370 (500)
T ss_pred eCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhcc
Confidence 999999999999999997642 137999999987532 22356799999995 57889999999987532 111
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHH
Q 000628 970 SSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1048 (1383)
Q Consensus 970 ~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~ 1048 (1383)
.........++.++++++.+++.+ ..++.+ ..|||||||||+||++|+.+|++|||||||+|||+.++..+++.
T Consensus 371 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 445 (500)
T TIGR02633 371 KMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKL 445 (500)
T ss_pred CCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHH
Confidence 001122334456889999999964 456653 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1049 VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1049 l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|++++++|.|||++||+++ ++.+.||++++|.+ |+++..++.
T Consensus 446 l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 446 INQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred HHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 9999888999999999986 57788999999975 788877754
No 30
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.8e-61 Score=658.92 Aligned_cols=210 Identities=21% Similarity=0.263 Sum_probs=177.4
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++|+|+++.++. +.+.+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 46999999988742 12469999999999999999999999999999999999764 37999999998
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000628 933 KNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1383)
Q Consensus 933 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1383)
+.. ..+|+.++||||++.+++. |++|||.... . ..++.++++++.++|.+. .|+.++..
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~----~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~ 1350 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------Q----WSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG 1350 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------C----CCHHHHHHHHHHCCCHHHHHhCccccccccccC
Confidence 753 5578899999999999975 9999994321 1 123458899999988653 34555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
..+||||||||+||||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|++ +....||+|++|++
T Consensus 1351 -G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl--~ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1351 -GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRV--EALLECQQFLVIEG 1426 (1490)
T ss_pred -CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCH--HHHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 479999999996 46678999999985
Q ss_pred CcEEEEecCC
Q 000628 1083 GGRVIYAGPL 1092 (1383)
Q Consensus 1083 gG~~~~~g~~ 1092 (1383)
|++++.|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 899999985
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-62 Score=608.49 Aligned_cols=451 Identities=21% Similarity=0.290 Sum_probs=341.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC----CcceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 259 (1383)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++||+|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999887 899999999875432 24579999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.++......+. .+..+ ....++.+++.+||++..++.+++
T Consensus 94 ~tv~~~l~~~~~~~~~~~-----------------~~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI-----------------VNRRL--------------LNYEAREQLEHLGVDIDPDTPLKY-- 140 (501)
T ss_pred CCHHHHHHhcccccccCC-----------------CCHHH--------------HHHHHHHHHHHcCCCCCcCCchhh--
Confidence 999999988532100000 00000 011345688999998777887776
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|+ ..++.++||+|++|++
T Consensus 141 ---LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiiiitHd-~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 141 ---LSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-EGRVILYVSHR-MEEIFALCDAITVFKD 215 (501)
T ss_pred ---CCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeCC-HHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999875 36677766655 4578899999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhcC
Q 000628 420 GQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLRV 499 (1383)
Q Consensus 420 G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 499 (1383)
|+++..++..+. . +.++..+.
T Consensus 216 G~i~~~~~~~~~-----------------------~--------------------~~~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ-----------------------V--------------------DRDQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc-----------------------C--------------------CHHHHHHH----------------
Confidence 999854421100 0 00000000
Q ss_pred CCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhHH
Q 000628 500 PYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFGA 579 (1383)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g~ 579 (1383)
+... ..
T Consensus 237 ------------------------------------------------------------~~~~-----~~--------- 242 (501)
T PRK11288 237 ------------------------------------------------------------MVGR-----EI--------- 242 (501)
T ss_pred ------------------------------------------------------------hcCC-----Cc---------
Confidence 0000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 000628 580 LFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQF 659 (1383)
Q Consensus 580 lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 659 (1383)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCCc
Q 000628 660 LAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGGR 739 (1383)
Q Consensus 660 l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 739 (1383)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchhhhccCc
Q 000628 740 WDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASGH 819 (1383)
Q Consensus 740 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1383)
.. . ..
T Consensus 243 ------~~---~--------------------------------------------~~---------------------- 247 (501)
T PRK11288 243 ------GD---I--------------------------------------------YG---------------------- 247 (501)
T ss_pred ------cc---c--------------------------------------------cc----------------------
Confidence 00 0 00
Q ss_pred cccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEe
Q 000628 820 EAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALM 899 (1383)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 899 (1383)
. .+. . ..+..++++|+++ ..+++|+|++|++||++||+
T Consensus 248 ------~-~~~-----------~-------~~~~~l~~~~~~~-----------------~~~l~~isl~i~~Ge~~~ii 285 (501)
T PRK11288 248 ------Y-RPR-----------P-------LGEVRLRLDGLKG-----------------PGLREPISFSVRAGEIVGLF 285 (501)
T ss_pred ------c-ccc-----------C-------CCCcEEEEecccc-----------------CCcccceeEEEeCCcEEEEE
Confidence 0 000 0 0011355666652 13899999999999999999
Q ss_pred ccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHHHHHHhhcCC-
Q 000628 900 GVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAWLRLSS- 971 (1383)
Q Consensus 900 G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~l~~~~- 971 (1383)
||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .+++.+|+.||+.+........
T Consensus 286 G~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~ 363 (501)
T PRK11288 286 GLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRA 363 (501)
T ss_pred cCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhccc
Confidence 9999999999999999765 347999999976532 22346799999986 4788999999998753211100
Q ss_pred C--CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHH
Q 000628 972 D--VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1048 (1383)
Q Consensus 972 ~--~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~ 1048 (1383)
. ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.++..++++
T Consensus 364 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 438 (501)
T PRK11288 364 GCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNV 438 (501)
T ss_pred ccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHH
Confidence 0 01222345678999999994 5667764 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1049 VRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1049 l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
|+++++.|.|||++||+++ ++.+.+|++++|.+ |++++.|+.++
T Consensus 439 l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 439 IYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred HHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 9999888999999999986 57788999999985 78999988754
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-61 Score=599.93 Aligned_cols=449 Identities=20% Similarity=0.292 Sum_probs=340.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999999887 9999999998754321 3569999999988999
Q ss_pred CCHHHHHHHhhh-ccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCc
Q 000628 260 MTVRETLDFSGR-CLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1383)
Q Consensus 260 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1383)
+||+||+.++.. ..+.. .+.. +....++.+++.+||++..++.+++
T Consensus 88 ~tv~~~l~~~~~~~~~~~-------------------~~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~- 134 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF-------------------VDQD-------------KMYRDTKAIFDELDIDIDPRAKVAT- 134 (491)
T ss_pred CCHHHHhhcccccccccc-------------------cCHH-------------HHHHHHHHHHHHcCCCCCccCchhh-
Confidence 999999987531 11100 0000 0011356688899999888888877
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.| ...++.++||+|++|+
T Consensus 135 ----LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tvii~tH-~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 135 ----LSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-RGCGIVYISH-KMEEIFQLCDEITILR 208 (491)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEec-CHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 4667766654 5568889999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhc
Q 000628 419 EGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLR 498 (1383)
Q Consensus 419 ~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 498 (1383)
+|+++..|+.+++.. .+ ..+.+
T Consensus 209 ~G~i~~~~~~~~~~~---------------~~-----------------------------~~~~~-------------- 230 (491)
T PRK10982 209 DGQWIATQPLAGLTM---------------DK-----------------------------IIAMM-------------- 230 (491)
T ss_pred CCEEEeecChhhCCH---------------HH-----------------------------HHHHH--------------
Confidence 999998776543200 00 00000
Q ss_pred CCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhH
Q 000628 499 VPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFG 578 (1383)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g 578 (1383)
....
T Consensus 231 --------------------------------------------------------------~~~~-------------- 234 (491)
T PRK10982 231 --------------------------------------------------------------VGRS-------------- 234 (491)
T ss_pred --------------------------------------------------------------hCCC--------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Q 000628 579 ALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQ 658 (1383)
Q Consensus 579 ~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 658 (1383)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCC
Q 000628 659 FLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGG 738 (1383)
Q Consensus 659 ~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 738 (1383)
.
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred ccccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchhhhccC
Q 000628 739 RWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASG 818 (1383)
Q Consensus 739 ~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1383)
.. . +
T Consensus 236 -------~~---~------------~------------------------------------------------------ 239 (491)
T PRK10982 236 -------TQ---R------------F------------------------------------------------------ 239 (491)
T ss_pred -------cc---c------------c------------------------------------------------------
Confidence 00 0 0
Q ss_pred ccccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEE
Q 000628 819 HEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTAL 898 (1383)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al 898 (1383)
+.. . . . + .+..++++|+++. .+.+|+|||+++++||++||
T Consensus 240 ----------~~~---~--~---~------~-~~~~i~~~~l~~~---------------~~~~l~~vsl~i~~Ge~~~l 279 (491)
T PRK10982 240 ----------PDK---E--N---K------P-GEVILEVRNLTSL---------------RQPSIRDVSFDLHKGEILGI 279 (491)
T ss_pred ----------ccc---c--C---C------C-CCcEEEEeCcccc---------------cCcccceeeEEEeCCcEEEE
Confidence 000 0 0 0 0 0113577777653 12489999999999999999
Q ss_pred eccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHHHHHH--hhc
Q 000628 899 MGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQND---IHSPYVTVYESLLYSAW--LRL 969 (1383)
Q Consensus 899 ~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~--l~~ 969 (1383)
+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++ .+++.+|+.+|..+... ...
T Consensus 280 ~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (491)
T PRK10982 280 AGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKN 357 (491)
T ss_pred ecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcc
Confidence 99999999999999999765 347999999977532 12345689999985 36788888877433211 100
Q ss_pred CCC-CcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHH
Q 000628 970 SSD-VDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR 1047 (1383)
Q Consensus 970 ~~~-~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~ 1047 (1383)
... ......++.+.++++.+++. +..++. +..|||||||||+||++|+.+|+||||||||+|||+.++..+++
T Consensus 358 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~ 432 (491)
T PRK10982 358 KVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQ 432 (491)
T ss_pred cccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHH
Confidence 001 11233345678899999985 455665 45799999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1048 TVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1048 ~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
.|+++.++|.|||++||+++ ++.+.||++++|.+ |+++..++.
T Consensus 433 ~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~ 475 (491)
T PRK10982 433 LIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDT 475 (491)
T ss_pred HHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEcc
Confidence 99999888999999999986 57788999999985 788876654
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.4e-60 Score=589.86 Aligned_cols=446 Identities=19% Similarity=0.281 Sum_probs=327.9
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCC--C--
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLH--H-- 257 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~--~-- 257 (1383)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 5999999999999999999999999999999999999887 8999999977643221 2458999998643 1
Q ss_pred ----CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccc
Q 000628 258 ----GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADT 333 (1383)
Q Consensus 258 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 333 (1383)
..+||+|++.+.. +....++.+++.+||++..++
T Consensus 94 ~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhhC
Confidence 1467777764310 001124567889999988888
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.|+|++.|+ ..++.++||+
T Consensus 132 ~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-g~tvii~tH~-~~~~~~~~d~ 204 (490)
T PRK10938 132 RFKY-----LSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQS-GITLVLVLNR-FDEIPDFVQF 204 (490)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhc-CCeEEEEeCC-HHHHHhhCCE
Confidence 8887 9999999999999999999999999999999999999999999998764 6777776654 5578899999
Q ss_pred EEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhH
Q 000628 414 IILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQI 493 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (1383)
|++|++|+++..|+++++.+. +.+....
T Consensus 205 v~~l~~G~i~~~~~~~~~~~~---------------~~~~~~~------------------------------------- 232 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQQ---------------ALVAQLA------------------------------------- 232 (490)
T ss_pred EEEEECCEEEEeCCHHHHhcc---------------hhhhhhh-------------------------------------
Confidence 999999999999887654210 0000000
Q ss_pred HhhhcCCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCc
Q 000628 494 ASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGG 573 (1383)
Q Consensus 494 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~ 573 (1383)
.. + ....
T Consensus 233 -----------------------------------~~------~-------------------------------~~~~- 239 (490)
T PRK10938 233 -----------------------------------HS------E-------------------------------QLEG- 239 (490)
T ss_pred -----------------------------------hh------h-------------------------------ccCc-
Confidence 00 0 0000
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHH
Q 000628 574 SRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAAS 653 (1383)
Q Consensus 574 ~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 653 (1383)
T Consensus 240 -------------------------------------------------------------------------------- 239 (490)
T PRK10938 240 -------------------------------------------------------------------------------- 239 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHH
Q 000628 654 RFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVN 733 (1383)
Q Consensus 654 ~f~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~n 733 (1383)
.
T Consensus 240 --------------------------------------------------------~----------------------- 240 (490)
T PRK10938 240 --------------------------------------------------------V----------------------- 240 (490)
T ss_pred --------------------------------------------------------c-----------------------
Confidence 0
Q ss_pred HhcCCccccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchh
Q 000628 734 EFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEK 813 (1383)
Q Consensus 734 ef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 813 (1383)
. .+.. ..
T Consensus 241 -------~--~~~~--~~-------------------------------------------------------------- 247 (490)
T PRK10938 241 -------Q--LPEP--DE-------------------------------------------------------------- 247 (490)
T ss_pred -------c--cCcc--cc--------------------------------------------------------------
Confidence 0 0000 00
Q ss_pred hhccCccccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCC
Q 000628 814 QRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPG 893 (1383)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G 893 (1383)
...+ . .. . .....++++|+++.++ ++.+|+|+||++++|
T Consensus 248 ------------~~~~-~-----~~---~-------~~~~~l~~~~l~~~~~-------------~~~il~~vsl~i~~G 286 (490)
T PRK10938 248 ------------PSAR-H-----AL---P-------ANEPRIVLNNGVVSYN-------------DRPILHNLSWQVNPG 286 (490)
T ss_pred ------------cccc-c-----cc---C-------CCCceEEEeceEEEEC-------------CeeEEeeceEEEcCC
Confidence 0000 0 00 0 0011367788776542 245999999999999
Q ss_pred eEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccCCCCCC--CCCHHHHHHHHHHh
Q 000628 894 VLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDIHSP--YVTVYESLLYSAWL 967 (1383)
Q Consensus 894 e~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~--~lTv~E~l~f~~~l 967 (1383)
|+++|+||||||||||+++|+|.... ..+|+|.++|.+... ...++.+||++|++.+++ ..|++|++.+...-
T Consensus 287 e~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~ 365 (490)
T PRK10938 287 EHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFD 365 (490)
T ss_pred CEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhcccc
Confidence 99999999999999999999996431 137999999976421 123567999999876543 35777766543210
Q ss_pred --hcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHH
Q 000628 968 --RLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1044 (1383)
Q Consensus 968 --~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~ 1044 (1383)
....... ...++.++++++.++|.+ ..++. +..|||||||||+||++|+.+|++|||||||+|||+.++..
T Consensus 366 ~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~ 439 (490)
T PRK10938 366 SIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAP-----FHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQL 439 (490)
T ss_pred ccccccCCC-HHHHHHHHHHHHHcCCchhhccCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHH
Confidence 0111111 223456889999999986 66666 35799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCC-CEEEEEecCCcHHHHH-hhceEEEEecCcEEEEe
Q 000628 1045 VMRTVRNTVDTG-RTVVCTIHQPSIDIFE-AFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1045 i~~~l~~~~~~g-~tvi~~~H~~~~~~~~-~~d~~~~l~~gG~~~~~ 1089 (1383)
+++.|++++++| .|||++||+++ ++.+ .+|++++|.+ |++++.
T Consensus 440 l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 440 VRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred HHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 999999998776 47999999975 4555 4799999975 666554
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=4.5e-58 Score=509.13 Aligned_cols=470 Identities=24% Similarity=0.339 Sum_probs=356.8
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC--CCCceeEEEECCeeCCCCCCc-------ceEEEecC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGK--DLRASGKITYCGHELNEFVPQ-------RTCAYISQ 252 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~I~~~G~~~~~~~~~-------~~~~yv~Q 252 (1383)
....++++|||.+++||.+||+|.||||||-..+.+.|+++. ....+|+|.|+|.++-....+ ..|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 456799999999999999999999999999999999999876 345689999999987544321 46999999
Q ss_pred CC--CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccc
Q 000628 253 HD--LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC 330 (1383)
Q Consensus 253 ~~--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 330 (1383)
+| .+.|-.|+...|.-..++... +++ ...+.++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------~~~------------------------~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------LSR------------------------AAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------ccH------------------------HHHHHHHHHHHHHcCCCch
Confidence 98 456666777777554443211 111 1122345668888999865
Q ss_pred ccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhh
Q 000628 331 ADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL 410 (1383)
Q Consensus 331 ~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~ 410 (1383)
.... ++....|||||||||.||.||+.+|++|+-||||++||...+.+|.++|+++....|..++.. +|+..-+-++
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfI-THDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFI-THDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEE-eccHHHHHHh
Confidence 4332 234566999999999999999999999999999999999999999999999998887766555 5566678899
Q ss_pred cCeEEEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccc
Q 000628 411 FDDIILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMG 490 (1383)
Q Consensus 411 ~D~i~lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (1383)
+|+|+||.+|+++++|+.+.+.. .|.+ ||
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pY------------------ 253 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PY------------------ 253 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hH------------------
Confidence 99999999999999999876632 1111 00
Q ss_pred hhHHhhhcCCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCC
Q 000628 491 QQIASDLRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDM 570 (1383)
Q Consensus 491 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~ 570 (1383)
. |.+
T Consensus 254 -------------------------------------T-r~L-------------------------------------- 257 (534)
T COG4172 254 -------------------------------------T-RKL-------------------------------------- 257 (534)
T ss_pred -------------------------------------H-HHH--------------------------------------
Confidence 0 000
Q ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCc
Q 000628 571 NGGSRYFGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDP 650 (1383)
Q Consensus 571 ~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~ 650 (1383)
T Consensus 258 -------------------------------------------------------------------------------- 257 (534)
T COG4172 258 -------------------------------------------------------------------------------- 257 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHH
Q 000628 651 AASRFFKQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSL 730 (1383)
Q Consensus 651 ~~~~f~~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al 730 (1383)
+.
T Consensus 258 -------------------------l~----------------------------------------------------- 259 (534)
T COG4172 258 -------------------------LA----------------------------------------------------- 259 (534)
T ss_pred -------------------------Hh-----------------------------------------------------
Confidence 00
Q ss_pred HHHHhcCCccccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeeccc
Q 000628 731 LVNEFLGGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEED 810 (1383)
Q Consensus 731 ~~nef~~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~ 810 (1383)
..+.+.
T Consensus 260 -----------aeP~g~--------------------------------------------------------------- 265 (534)
T COG4172 260 -----------AEPSGD--------------------------------------------------------------- 265 (534)
T ss_pred -----------cCCCCC---------------------------------------------------------------
Confidence 000000
Q ss_pred chhhhccCccccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEE
Q 000628 811 GEKQRASGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVF 890 (1383)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i 890 (1383)
..+ ..+..+.-++.+|++..++.+..+-.. ..+...++++||++.
T Consensus 266 ----------------~~p-----------------~~~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~~~AVd~isl~L 310 (534)
T COG4172 266 ----------------PPP-----------------LPEDAPVLLEVEDLRVWFPIKGGFLRR--TVDHLRAVDGISLTL 310 (534)
T ss_pred ----------------CCC-----------------CCCCCCceEEecceEEEEecCCccccc--cchheEEeccceeEe
Confidence 000 000011223333433333322111100 123356999999999
Q ss_pred eCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hcccceEEEEccCCC--CCCCCCHHHHHH
Q 000628 891 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDI--HSPYVTVYESLL 962 (1383)
Q Consensus 891 ~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~--~~~~lTv~E~l~ 962 (1383)
++||.+||+|.||||||||=.+|.+...+ +|+|.++|.++.. ..+|+.+-.|+|||. +.|.+||.|-+.
T Consensus 311 ~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~ 387 (534)
T COG4172 311 RRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIE 387 (534)
T ss_pred cCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhh
Confidence 99999999999999999999999987653 5999999988653 346778999999985 789999999998
Q ss_pred HHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHH
Q 000628 963 YSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1041 (1383)
Q Consensus 963 f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~ 1041 (1383)
-+.....+ ..+..++++++.++|+.+||.+- .++. +..+|||||||++|||||+.+|++++||||||.||-.-
T Consensus 388 EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SV 461 (534)
T COG4172 388 EGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSV 461 (534)
T ss_pred hhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHH
Confidence 77666543 46778899999999999999753 4444 56899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1042 AAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1042 ~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
+.+|.++|+++.++ |.+-++++||+. -+-.+||++++|.+ |+|++.||.
T Consensus 462 QaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 462 QAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 99999999999754 899999999976 36678999999974 899999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.4e-57 Score=571.29 Aligned_cols=201 Identities=23% Similarity=0.317 Sum_probs=162.1
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++ ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECC-c-
Confidence 478888876542 3469999999999999999999999999999999999765 3479999853 1
Q ss_pred ChhcccceEEEEccCC-CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000628 934 NQETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQ 1011 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGq 1011 (1383)
..+||++|++ .+++.+||.|++.+...... .... ...+.++++.+++.+ ..++. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999996 67888999999987643221 1111 123457899999964 45555 35799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEE-Eec
Q 000628 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YAG 1090 (1383)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g 1090 (1383)
||||+||++|+.+|++|||||||+|||+.++..+++.|+++. | |||++||+++ .+...||++++|.++|++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999976 5677899999998667765 455
Q ss_pred C
Q 000628 1091 P 1091 (1383)
Q Consensus 1091 ~ 1091 (1383)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 36
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.4e-57 Score=571.37 Aligned_cols=201 Identities=21% Similarity=0.296 Sum_probs=161.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECC-c-
Confidence 477888876542 2469999999999999999999999999999999999765 3479998854 1
Q ss_pred ChhcccceEEEEccCC-CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000628 934 NQETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQ 1011 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGq 1011 (1383)
..+||++|++ .+++.+||.|++.+...... .... ...+.++++.+++.+ ..+.. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1589999986 47788999999987642211 1111 123557899999964 45555 35799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEE-Eec
Q 000628 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YAG 1090 (1383)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g 1090 (1383)
||||+||++|+.+|++|||||||+|||+.++..+++.|+++. .|||++||+++ .+...||++++|.+||++. +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999873 38999999975 5667899999998666765 445
Q ss_pred C
Q 000628 1091 P 1091 (1383)
Q Consensus 1091 ~ 1091 (1383)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 37
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-57 Score=567.83 Aligned_cols=198 Identities=19% Similarity=0.286 Sum_probs=162.4
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 478888876542 24599999999999999999999999999999999997653 4799999873
Q ss_pred ChhcccceEEEEccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000628 934 NQETFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgG 1010 (1383)
+.+||++|++. +.+.+||+|++.+.. .. . ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 45899999864 456799999986421 11 1 1124578899999994 556665 4579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEE-Ee
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YA 1089 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~ 1089 (1383)
|||||+||++|+.+|+||||||||+|||+.+...+++.|+++ +.|||++||+++ .+...||++++|.+ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999986 459999999975 56678999999986 6665 77
Q ss_pred cCC
Q 000628 1090 GPL 1092 (1383)
Q Consensus 1090 g~~ 1092 (1383)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=7.5e-56 Score=552.84 Aligned_cols=211 Identities=21% Similarity=0.251 Sum_probs=169.8
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ + ..|+++|++|++||++||+||||||||||+++|+|...+ .+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----
Confidence 367777775431 1 258999999999999999999999999999999997653 47898875
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000628 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1383)
..++|++|+..+.+.+||+|++.+.... .. . ...++++++.++|.+..++. +..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~---~~--~---~~~~~~~L~~l~l~~~~~~~-----~~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD---LG--S---SYYKSEIIKPLQLERLLDKN-----VKDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh---cC--h---HHHHHHHHHHCCCHHHHhCC-----cccCCHHHHH
Confidence 1489999998888899999999874211 11 1 12468899999998877776 4579999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
||+||++|+.+|+||||||||+|||+.++..+.+.|++++++ |+|||++|||+. .+...+|++++|. |++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--Ccceeeeec
Confidence 999999999999999999999999999999999999999764 899999999975 4667899999995 466666664
Q ss_pred Ccc---hhHHHHHHHhC
Q 000628 1093 GHE---SHKLIEYFEAV 1106 (1383)
Q Consensus 1093 ~~~---~~~~~~~f~~~ 1106 (1383)
... .+.+..|+..+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 322 22345556665
No 39
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-54 Score=510.60 Aligned_cols=451 Identities=24% Similarity=0.359 Sum_probs=349.6
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCc----ceEEEecCCCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ----RTCAYISQHDLHH 257 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~~~~~ 257 (1383)
...++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.+||++.....++ ..|+.|.|+..+.
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 5678999999999999999999999999999999999999998 99999999998765553 5699999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
|+|||.|||.++....... +... . .........+|+.+|+....++.|++
T Consensus 96 p~LsVaeNifLgre~~~~~----------------g~id---~-----------~~m~~~A~~~l~~lg~~~~~~~~v~~ 145 (500)
T COG1129 96 PNLSVAENIFLGREPTRRF----------------GLID---R-----------KAMRRRARELLARLGLDIDPDTLVGD 145 (500)
T ss_pred CCccHHHHhhcccccccCC----------------CccC---H-----------HHHHHHHHHHHHHcCCCCChhhhhhh
Confidence 9999999998765432210 0000 0 01122456789999997668999998
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
||+||||-|.||+|+..++++++|||||++|+...+..+.+.++++.. .|.+ ++.+.|..+|++++||+|.||
T Consensus 146 -----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~-~Gv~-ii~ISHrl~Ei~~i~DritVl 218 (500)
T COG1129 146 -----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA-QGVA-IIYISHRLDEVFEIADRITVL 218 (500)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCCE-EEEEcCcHHHHHHhcCEEEEE
Confidence 999999999999999999999999999999999999999999999986 3555 455567889999999999999
Q ss_pred cCCeEEEecCh-hHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhh
Q 000628 418 SEGQIVYQGPR-DNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASD 496 (1383)
Q Consensus 418 ~~G~iv~~G~~-~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (1383)
.+|+.+..++. .+.- .++..
T Consensus 219 RDG~~v~~~~~~~~~~--------------------------------------------~~~lv--------------- 239 (500)
T COG1129 219 RDGRVVGTRPTAAETS--------------------------------------------EDELV--------------- 239 (500)
T ss_pred eCCEEeeecccccCCC--------------------------------------------HHHHH---------------
Confidence 99999876552 2110 00000
Q ss_pred hcCCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccch
Q 000628 497 LRVPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRY 576 (1383)
Q Consensus 497 l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~ 576 (1383)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T COG1129 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHH
Q 000628 577 FGALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFF 656 (1383)
Q Consensus 577 ~g~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~ 656 (1383)
-.|+|-
T Consensus 240 ------------------------------------------------------------------~~MvGr-------- 245 (500)
T COG1129 240 ------------------------------------------------------------------RLMVGR-------- 245 (500)
T ss_pred ------------------------------------------------------------------HHhhCc--------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhc
Q 000628 657 KQFLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFL 736 (1383)
Q Consensus 657 ~~~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~ 736 (1383)
+.
T Consensus 246 -----------------------------------------------------------------------------~~- 247 (500)
T COG1129 246 -----------------------------------------------------------------------------EL- 247 (500)
T ss_pred -----------------------------------------------------------------------------ch-
Confidence 00
Q ss_pred CCccccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchhhhc
Q 000628 737 GGRWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRA 816 (1383)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 816 (1383)
...|.
T Consensus 248 ~~~~~--------------------------------------------------------------------------- 252 (500)
T COG1129 248 EDLFP--------------------------------------------------------------------------- 252 (500)
T ss_pred hhhcc---------------------------------------------------------------------------
Confidence 00000
Q ss_pred cCccccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEE
Q 000628 817 SGHEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLT 896 (1383)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ 896 (1383)
. .... ...+..++++|++. ...++||||++++||++
T Consensus 253 ------------------~---~~~~------~~~~~~l~v~~l~~-----------------~~~~~dvSf~vr~GEIl 288 (500)
T COG1129 253 ------------------E---PPEE------GIGEPVLEVRNLSG-----------------GGKVRDVSFTVRAGEIL 288 (500)
T ss_pred ------------------c---cccc------CCCCcEEEEecCCC-----------------CCceeCceeEEeCCcEE
Confidence 0 0000 00112345555542 11578999999999999
Q ss_pred EEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccC---CCCCCCCCHHHHHHHHHHhhc
Q 000628 897 ALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQN---DIHSPYVTVYESLLYSAWLRL 969 (1383)
Q Consensus 897 al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~~lTv~E~l~f~~~l~~ 969 (1383)
||-|-=|||+|-|+++|.|... ...|+|.+||.+... ...+..++|||.| +.+++.++|.||+.++...+.
T Consensus 289 GiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~ 366 (500)
T COG1129 289 GIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRF 366 (500)
T ss_pred EEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhh
Confidence 9999999999999999999543 347999999997532 3456679999987 457889999999988733222
Q ss_pred C-C-CCcHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHH
Q 000628 970 S-S-DVDTKKRKMFVDEVMELVELKSLN-DSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1046 (1383)
Q Consensus 970 ~-~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~ 1046 (1383)
. . -.+....++.+++..+.++++... +.. +..||||++|||.|||.|..+|++|||||||.|+|.-+..+|.
T Consensus 367 ~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy 441 (500)
T COG1129 367 SRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIY 441 (500)
T ss_pred ccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHH
Confidence 1 1 244555667789999999986432 233 4589999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1047 RTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1047 ~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
++|++++++|++||++|-+.. |+...||||++|.+ |+++..=+
T Consensus 442 ~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~ 484 (500)
T COG1129 442 RLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELD 484 (500)
T ss_pred HHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEec
Confidence 999999999999999999875 89999999999985 78876433
No 40
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-54 Score=542.40 Aligned_cols=197 Identities=22% Similarity=0.335 Sum_probs=158.7
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 477888876542 3469999999999999999999999999999999999765 34789988641
Q ss_pred ChhcccceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 000628 934 NQETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgG 1010 (1383)
..+||++|+. .+.+..|+.+++.- . .. ......+.++++.+++.. ..++.+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 1 11 122345788999999963 556653 479999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEE-Ee
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YA 1089 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~ 1089 (1383)
|||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ . .|||++||++. .+...||++++|.+ |+++ +.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999975 46678999999985 6776 78
Q ss_pred cCC
Q 000628 1090 GPL 1092 (1383)
Q Consensus 1090 g~~ 1092 (1383)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 41
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.4e-53 Score=542.16 Aligned_cols=202 Identities=24% Similarity=0.314 Sum_probs=161.2
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++ ++.+|+|||++|++|+++||+|||||||||||++|+|... +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 467888876542 3469999999999999999999999999999999999755 34799988 4321
Q ss_pred ChhcccceEEEEccCC-CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 000628 934 NQETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQ 1011 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGq 1011 (1383)
.+||++|+. .+++.+||.|++.+..... ... .....+.++++.+++. +..++. +..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTP-----VKALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhCh-----hhhCCHHH
Confidence 489999975 5788999999998753210 111 1123477889999885 345555 34799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe-cCcEEEEec
Q 000628 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-RGGRVIYAG 1090 (1383)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-~gG~~~~~g 1090 (1383)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++||+.. .+...||+++++. +|....|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999975 4667899999997 544455666
Q ss_pred CC
Q 000628 1091 PL 1092 (1383)
Q Consensus 1091 ~~ 1092 (1383)
+.
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 53
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=6.4e-51 Score=516.65 Aligned_cols=200 Identities=19% Similarity=0.248 Sum_probs=155.9
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ +++.+|+|+||+|++|++++|+|||||||||||++|+|... +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 478888887552 12359999999999999999999999999999999999765 34789988652
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000628 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLSTEQR 1012 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSgGqr 1012 (1383)
..+||++|+.. +.+++.++..+......+ ... ++.+.++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 35899999753 445666664332111111 111 234788999999973 45554 457999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEE-EecC
Q 000628 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI-YAGP 1091 (1383)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g~ 1091 (1383)
|||+||++|+.+|++|||||||+|||+.+...+.+.|++. . .|||++||++. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888765 3 49999999976 46678999999985 7776 6775
Q ss_pred C
Q 000628 1092 L 1092 (1383)
Q Consensus 1092 ~ 1092 (1383)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3.3e-51 Score=497.02 Aligned_cols=225 Identities=27% Similarity=0.298 Sum_probs=174.2
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lT 261 (1383)
..+++|+|+|+.+.+|+.++|+|+|||||||||++|+|...|+ +|+|...+ .-.++|++|++...+..|
T Consensus 14 g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~t 82 (530)
T COG0488 14 GDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKT 82 (530)
T ss_pred CCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCcc
Confidence 4567999999999999999999999999999999999999998 99998754 236999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHH-HHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFM-KAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|.+.+.-+.. ..++...+.........-......++.. ......++..+..+..++..||++.. ++.+++
T Consensus 83 v~~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~--- 153 (530)
T COG0488 83 VLDYVIEGFG-----ELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSS--- 153 (530)
T ss_pred HHHHHHhhhH-----HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhh---
Confidence 9999976532 2222222222211110000001111111 12224456677788999999999987 888988
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
||||||.||+||+||+.+|++|+|||||++||..+..++.+.|++. .+ |+| .++|.....-+.|++|+-++.|
T Consensus 154 --LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~---~g-tvi-iVSHDR~FLd~V~t~I~~ld~g 226 (530)
T COG0488 154 --LSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY---PG-TVI-VVSHDRYFLDNVATHILELDRG 226 (530)
T ss_pred --cCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC---CC-cEE-EEeCCHHHHHHHhhheEEecCC
Confidence 9999999999999999999999999999999999999999999864 23 444 4567787888999999999999
Q ss_pred eE-EEecChhHHHH
Q 000628 421 QI-VYQGPRDNVLE 433 (1383)
Q Consensus 421 ~i-v~~G~~~~~~~ 433 (1383)
++ .|.|+++...+
T Consensus 227 ~l~~y~Gny~~~~~ 240 (530)
T COG0488 227 KLTPYKGNYSSYLE 240 (530)
T ss_pred ceeEecCCHHHHHH
Confidence 77 57788876554
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=4.4e-50 Score=461.72 Aligned_cols=458 Identities=23% Similarity=0.321 Sum_probs=354.0
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCc----ceEEEecCCCCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ----RTCAYISQHDLHHG 258 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~~~~~~ 258 (1383)
...+++|||+++++||+.||+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ ..||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 678999999999999999999999999999999999999998 99999999998766553 46999999999999
Q ss_pred CCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCc
Q 000628 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1383)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1383)
++||.|||..+..-...+ +. .++ .....++.+.+.+||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~~-~~------~~~------------------------~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKGG-LI------DRR------------------------QARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCcccccc-cc------CHH------------------------HHHHHHHHHHHHhCCCCCccceeec-
Confidence 999999999875421100 00 000 1123467788999999999999999
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
||=||||||.|-++|+.+|++|+|||||+-|-|....++.+.|+++++ .|+|+|.. +|-..|+.++||++-||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~G~tIi~I-THKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-EGKTIIFI-THKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEE-eccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999987 46666554 567789999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCccchhhhhhhcCCCCCCCChhHHHHHHHhCccchhHHhhhc
Q 000628 419 EGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWFRKNQPYRYIPVSDFVEGFKSFHMGQQIASDLR 498 (1383)
Q Consensus 419 ~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 498 (1383)
.|+++-.-++ .. + .+.++.++
T Consensus 215 ~Gkvvgt~~~--~~--------------~---------------------------~t~~ela~---------------- 235 (501)
T COG3845 215 RGKVVGTVDP--VA--------------E---------------------------TTEEELAE---------------- 235 (501)
T ss_pred CCeEEeeecC--CC--------------C---------------------------CCHHHHHH----------------
Confidence 9998643211 00 0 00000000
Q ss_pred CCCCcccCCCCccccCccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhhcccCCcCCCCCccchhH
Q 000628 499 VPYDKSQAHPASLVKEKYGISKWELFRACFAREWLLMKRNSFVYIFKTFQLTFMSLICMTVYFRTEMSVGDMNGGSRYFG 578 (1383)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~l~~~r~~~~~~~~~~~~~i~ali~~tvf~~~~~~~~~~~~~~~~~g 578 (1383)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T COG3845 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHhhhhccCcccchhhHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Q 000628 579 ALFFSLLNIMFNGFAENAMTVLRLPIFYKQRDHLFYPSWAFALPIWLLRIPISILDSTIWVALTYYTIGYDPAASRFFKQ 658 (1383)
Q Consensus 579 ~lff~l~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~a~~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 658 (1383)
.|+|
T Consensus 236 -----------------------------------------------------------------lMvG----------- 239 (501)
T COG3845 236 -----------------------------------------------------------------LMVG----------- 239 (501)
T ss_pred -----------------------------------------------------------------HhcC-----------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhccccCCchhhHHHHHHHcHHHHHHHHHHHHHhcCC
Q 000628 659 FLAFFSIHNMSLPLYRLVAAVGRTEVISNTLGTFILLIMMSLGGFVMAKDDIEPFLRWGYYISPMMYGQTSLLVNEFLGG 738 (1383)
Q Consensus 659 ~l~~~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 738 (1383)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCccccccchhhcccCccccCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceeecccchhhhccC
Q 000628 739 RWDAQNKDPSINQPTIGKVLLKIRGFSTESNWYWIGVGALTGYSFLFNFLFIAALAYLNPIGDSNSTVIEEDGEKQRASG 818 (1383)
Q Consensus 739 ~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (1383)
..+.
T Consensus 240 -----------------~~v~----------------------------------------------------------- 243 (501)
T COG3845 240 -----------------REVV----------------------------------------------------------- 243 (501)
T ss_pred -----------------Cccc-----------------------------------------------------------
Confidence 0000
Q ss_pred ccccchhhhhcccccccccccccccCccccccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEE
Q 000628 819 HEAEGMQMAVRSSSKTVGAAQNVTNRGMILPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTAL 898 (1383)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al 898 (1383)
..... .. .. | .+..++++|++...+ .....+++|||++++||++||
T Consensus 244 -------~~~~~-------~~--~~-----p-g~~vL~V~~L~v~~~------------~~~~~v~~vs~~Vr~GEIvGI 289 (501)
T COG3845 244 -------LRVVK-------PP--ST-----P-GEVVLEVEDLSVKDR------------RGVTAVKDVSFEVRAGEIVGI 289 (501)
T ss_pred -------ccccc-------CC--CC-----C-CCeEEEEeeeEeecC------------CCCceeeeeeeEEecCcEEEE
Confidence 00000 00 00 0 022456666654221 124589999999999999999
Q ss_pred eccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC----Chhc-ccceEEEEccCC---CCCCCCCHHHHHHHHHHhh--
Q 000628 899 MGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK----NQET-FARVSGYCEQND---IHSPYVTVYESLLYSAWLR-- 968 (1383)
Q Consensus 899 ~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~----~~~~-~~~~~gyv~Q~~---~~~~~lTv~E~l~f~~~l~-- 968 (1383)
.|..|-|-+.|+.+|+|..+. ..|+|.++|.+. +... .+..++|||.|. .+.+.+|+.||+.+...-+
T Consensus 290 AGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~ 367 (501)
T COG3845 290 AGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKP 367 (501)
T ss_pred EecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccc
Confidence 999999999999999997542 249999999985 2222 335689999986 3568899999998764321
Q ss_pred --cCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHH
Q 000628 969 --LSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1046 (1383)
Q Consensus 969 --~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~ 1046 (1383)
...-.......+...++++.++........ ..+.||||++||+-+||+|.++|++|++.+||.|||..+.+.|.
T Consensus 368 ~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~----~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~ 443 (501)
T COG3845 368 FSRGGFLDRRAIRKFARELIEEFDVRAPSPDA----PARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIH 443 (501)
T ss_pred cccccccCHHHHHHHHHHHHHHcCccCCCCCc----chhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHH
Confidence 111244566778889999999886322211 24689999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1047 RTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1047 ~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
+.|.+.+++|++|++++-+++ |+++.+|++.+|.+ |+++...++.+
T Consensus 444 ~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~~ 489 (501)
T COG3845 444 ERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPEE 489 (501)
T ss_pred HHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceeccccccc
Confidence 999999999999999999997 89999999999985 89987777643
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-44 Score=376.15 Aligned_cols=205 Identities=25% Similarity=0.371 Sum_probs=182.2
Q ss_pred cccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC----hhcccceEEEEccCCCCC
Q 000628 877 EDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN----QETFARVSGYCEQNDIHS 952 (1383)
Q Consensus 877 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~----~~~~~~~~gyv~Q~~~~~ 952 (1383)
++..++|+|||++|++||+++|+|||||||||||++|.|+.. +.+|+|.++|.+.. ...+|+.+|+|+|+..+|
T Consensus 12 fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLF 89 (240)
T COG1126 12 FGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLF 89 (240)
T ss_pred eCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEeccchhhHHHHHHhcCeeccccccc
Confidence 356789999999999999999999999999999999999866 34899999996542 245788999999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000628 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1383)
Q Consensus 953 ~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1383)
|++||.||+.++...- ...++++.++...++|+.+||.+.+|.. +..|||||||||+|||||+.+|+++++||
T Consensus 90 PHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGGQqQRVAIARALaM~P~vmLFDE 162 (240)
T COG1126 90 PHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGGQQQRVAIARALAMDPKVMLFDE 162 (240)
T ss_pred ccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcHHHHHHHHHHHHcCCCCEEeecC
Confidence 9999999999875432 2456677788899999999999999988 45899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1033 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|||+|||+...+|.+.+++++++|.|+||+||.... .-+.+||++.|+ +|+++..|++
T Consensus 163 PTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd-~G~iie~g~p 220 (240)
T COG1126 163 PTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMD-QGKIIEEGPP 220 (240)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEee-CCEEEEecCH
Confidence 999999999999999999999999999999998753 556789999997 5899998875
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-43 Score=366.71 Aligned_cols=222 Identities=26% Similarity=0.398 Sum_probs=186.7
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC----CCcceEEEecCCCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF----VPQRTCAYISQHDLHH 257 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~----~~~~~~~yv~Q~~~~~ 257 (1383)
...++|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..|+.+|+|+|+..+|
T Consensus 13 g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLF 89 (240)
T COG1126 13 GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLF 89 (240)
T ss_pred CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeeccccccc
Confidence 4567999999999999999999999999999999999999998 99999999766422 2367899999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
|++||.||+..+...-. .. ...+++.....+|+.+||.+.+|.....
T Consensus 90 PHlTvleNv~lap~~v~---------~~------------------------~k~eA~~~A~~lL~~VGL~~ka~~yP~q 136 (240)
T COG1126 90 PHLTVLENVTLAPVKVK---------KL------------------------SKAEAREKALELLEKVGLADKADAYPAQ 136 (240)
T ss_pred ccchHHHHHHhhhHHHc---------CC------------------------CHHHHHHHHHHHHHHcCchhhhhhCccc
Confidence 99999999988632110 00 1111223456689999999999998877
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++. |.|++|.+| ....+.+.+|+|+.|
T Consensus 137 -----LSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e-GmTMivVTH-EM~FAr~VadrviFm 209 (240)
T COG1126 137 -----LSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE-GMTMIIVTH-EMGFAREVADRVIFM 209 (240)
T ss_pred -----cCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc-CCeEEEEec-hhHHHHHhhheEEEe
Confidence 9999999999999999999999999999999999999999999999984 678887765 455788999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHh
Q 000628 418 SEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQE 454 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~ 454 (1383)
++|+++.+|+++++ |..|.+....+|+..
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 99999999999876 344665556666654
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.2e-41 Score=392.13 Aligned_cols=202 Identities=19% Similarity=0.204 Sum_probs=153.8
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..+.+.|+++.++. +..++++++|-|.+++.+|++|||||||||||+++.|... +..|.+.-.-+
T Consensus 388 pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H- 452 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSH- 452 (614)
T ss_pred CeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--ccccccccccc-
Confidence 35778888875531 2258999999999999999999999999999999999765 34676643322
Q ss_pred CChhcccceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 933 KNQETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 933 ~~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
.++++..|.. .+--..++-|+++=.. ..+.+.+.+..++..+||+...+... +++||+|
T Consensus 453 -------~~~~~y~Qh~~e~ldl~~s~le~~~~~~--------~~~~~~e~~r~ilgrfgLtgd~q~~p----~~~LS~G 513 (614)
T KOG0927|consen 453 -------NKLPRYNQHLAEQLDLDKSSLEFMMPKF--------PDEKELEEMRSILGRFGLTGDAQVVP----MSQLSDG 513 (614)
T ss_pred -------ccchhhhhhhHhhcCcchhHHHHHHHhc--------cccchHHHHHHHHHHhCCCccccccc----hhhcccc
Confidence 1233444432 2233456666553211 11234556889999999985443331 5689999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
||+||..|+.++..|.||+|||||+|||..+...+.++|.+. ..+||+++||.. -+.+.++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999999875 468999999976 3777889999999888888988
Q ss_pred CC
Q 000628 1091 PL 1092 (1383)
Q Consensus 1091 ~~ 1092 (1383)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 75
No 48
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-42 Score=375.72 Aligned_cols=203 Identities=27% Similarity=0.353 Sum_probs=183.1
Q ss_pred cceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hcccceEEEEccCCCCC
Q 000628 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHS 952 (1383)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~ 952 (1383)
...+|+|||++|++||++||+|.||||||||++++.++.. +.+|+|.++|.++.. ..+|+.+|+++|+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 4579999999999999999999999999999999999766 358999999976532 34678899999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000628 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1383)
Q Consensus 953 ~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1383)
...||.||+.|...+.. .+++++++++.++++.+||.+.++.. +.+|||||||||+|||||+.+|+||++||
T Consensus 96 ssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLSGGQKQRVaIARALa~~P~iLL~DE 167 (339)
T COG1135 96 SSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLSGGQKQRVAIARALANNPKILLCDE 167 (339)
T ss_pred ccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcCcchhhHHHHHHHHhcCCCEEEecC
Confidence 99999999999987763 56888999999999999999998887 45899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1033 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
|||+|||++.+.|.++|+++.++ |.||+++||+++ -+-+.||++.+|. .|++++.|+..
T Consensus 168 aTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~-~G~lvE~G~v~ 227 (339)
T COG1135 168 ATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLD-QGRLVEEGTVS 227 (339)
T ss_pred ccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEee-CCEEEEeccHH
Confidence 99999999999999999999755 999999999976 3667899999997 58999999864
No 49
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.6e-42 Score=360.17 Aligned_cols=231 Identities=26% Similarity=0.368 Sum_probs=198.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+++++++.+ .+.+.||+|||++|++||+++||||||+||||||++|.|..++ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~-------------fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKS-------------FGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeee-------------cCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 4677776643 3567899999999999999999999999999999999998764 489999999876
Q ss_pred Ch------hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 000628 934 NQ------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSG 1006 (1383)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~ 1006 (1383)
.+ ...++++|+++|+-.+|..+||+||+.|.. |.....+++..++.+..-|+.+||... .+.. ++.
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 245678999999999999999999999865 344566778888888999999999887 6665 568
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
||||||||++||||++.+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..+|+++++.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877 999999999987 68899999999985 89
Q ss_pred EEEecCCCcc----hhHHHHHHHhCCC
Q 000628 1086 VIYAGPLGHE----SHKLIEYFEAVPG 1108 (1383)
Q Consensus 1086 ~~~~g~~~~~----~~~~~~~f~~~~~ 1108 (1383)
++..|++++. ..-+.+||....+
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCCC
Confidence 9999997542 2236677776543
No 50
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-41 Score=389.96 Aligned_cols=202 Identities=32% Similarity=0.473 Sum_probs=181.6
Q ss_pred cceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCC
Q 000628 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVT 956 (1383)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 956 (1383)
++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT 94 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELT 94 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCccCHHHHHhheEEEccCCCCCcccc
Confidence 46899999999999999999999999999999999998763 58999999987653 456788999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCC
Q 000628 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1383)
Q Consensus 957 v~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1036 (1383)
|+|+|.|.+.++.... ...+++++++++.++|.+..++. +++||+||||||+||+||+++|++|||||||+|
T Consensus 95 ~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~G 166 (293)
T COG1131 95 VRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMKQRLSIALALLHDPELLILDEPTSG 166 (293)
T ss_pred HHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcC
Confidence 9999999999886543 44556799999999999855555 458999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCC-CEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1037 LDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|||.++..+++.|++++++| +||+++||+++ ++...||++++|.+ |++++.|+.
T Consensus 167 LDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~~ 221 (293)
T COG1131 167 LDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGTP 221 (293)
T ss_pred CCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCCH
Confidence 99999999999999999887 89999999986 67788999999985 899999975
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-41 Score=367.38 Aligned_cols=217 Identities=28% Similarity=0.440 Sum_probs=184.2
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ..++|+|||+++++|++++|+||||||||||+|+|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~-------------~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG-------------NRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC-------------CEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 478888887663 2259999999999999999999999999999999999665 3589999999886
Q ss_pred ChhcccceEEEEccCCCCC--CCCCHHHHHHHHHHhhcC--CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 934 NQETFARVSGYCEQNDIHS--PYVTVYESLLYSAWLRLS--SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~--~~lTv~E~l~f~~~l~~~--~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
....-+..+|||||...+. .-+||+|-+..+..-+.. .... ++.++.++++|+.+|+.+++|+.+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 5544456899999965322 237999999886432221 1122 3336779999999999999999976 6999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
||+|||.|||||+.+|++|+|||||+|+|+.++..++++|++++++|+||++++||++ .+.+.||+++.|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999988999999999997 5889999999996 589999
Q ss_pred cCCCc
Q 000628 1090 GPLGH 1094 (1383)
Q Consensus 1090 g~~~~ 1094 (1383)
|++.+
T Consensus 220 G~~~~ 224 (254)
T COG1121 220 GPPEE 224 (254)
T ss_pred cChhh
Confidence 99865
No 52
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-41 Score=363.82 Aligned_cols=203 Identities=26% Similarity=0.394 Sum_probs=178.6
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++++++.+ +...+|+|||++|++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 4 l~i~~v~~~f-------------~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v~ 68 (248)
T COG1116 4 LEIEGVSKSF-------------GGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPVT 68 (248)
T ss_pred EEEEeeEEEe-------------CceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCcccC
Confidence 5666666544 236799999999999999999999999999999999998763 4899999998863
Q ss_pred hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000628 935 QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKR 1014 (1383)
Q Consensus 935 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqR 1014 (1383)
.-...+|||+|++.++|.+||+||+.|+...+. ..++++++++++.|+.+||.+..|.. +++||||||||
T Consensus 69 --~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQR 138 (248)
T COG1116 69 --GPGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQR 138 (248)
T ss_pred --CCCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHHH
Confidence 234668999999999999999999999887653 34566677899999999999999988 56899999999
Q ss_pred HHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecC
Q 000628 1015 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1383)
Q Consensus 1015 l~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1083 (1383)
|+|||||+.+|+||+||||+++||+.++..+++.|.++.+ .++|||++||+.+ |...++|+|++|.++
T Consensus 139 VaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 139 VAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 9999999999999999999999999999999999999865 4899999999986 777899999999863
No 53
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=359.39 Aligned_cols=204 Identities=25% Similarity=0.363 Sum_probs=183.4
Q ss_pred ccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEEccCCCCCCC
Q 000628 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPY 954 (1383)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 954 (1383)
.++.+++|+|++|++||+++++|||||||||+|++|.+... +.+|+|.+||.++.. ..+||.+|||-|.-.+||+
T Consensus 12 ~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 12 GNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 35679999999999999999999999999999999999876 458999999998654 5688999999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000628 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS--LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1383)
Q Consensus 955 lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1383)
+||.||+.+--.+. ..++++.+++++|+|+++||.+ +.++. ++.|||||+|||.+||||+.+|+||+|||
T Consensus 90 ~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSGGQQQRVGv~RALAadP~ilLMDE 161 (309)
T COG1125 90 LTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSGGQQQRVGVARALAADPPILLMDE 161 (309)
T ss_pred ccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCcchhhHHHHHHHHhcCCCeEeecC
Confidence 99999998866553 4567888899999999999975 67776 56899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1033 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
|+++|||.++..+++.++++.++ |+|||++|||.+ |.+.++|++++|+ +|+++..+++.
T Consensus 162 PFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q~~~P~ 221 (309)
T COG1125 162 PFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQYDTPD 221 (309)
T ss_pred CccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEEeCCHH
Confidence 99999999999999999999765 999999999987 7889999999998 58888887754
No 54
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.3e-41 Score=370.50 Aligned_cols=218 Identities=30% Similarity=0.435 Sum_probs=186.4
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++.+|+++.+ +++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 3 L~~~~ls~~y-------------~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i~ 67 (258)
T COG1120 3 LEVENLSFGY-------------GGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDIA 67 (258)
T ss_pred eEEEEEEEEE-------------CCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCchh
Confidence 5677777655 35679999999999999999999999999999999999765 34799999998764
Q ss_pred ---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCC-CCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 935 ---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSS-DVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 935 ---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
.+.+++.+|||||.....+.+||+|.+.++..-+... ....++..+.++++|+.+++.+++++.+ ..||||
T Consensus 68 ~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGG 142 (258)
T COG1120 68 SLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGG 142 (258)
T ss_pred hcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChh
Confidence 3567889999999998888999999998874322111 1122333447899999999999999884 579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
||||+.|||||+++|+||+||||||+||...+.+++++++++++ +|+|||+++||++. ....||++++|++ |+++..
T Consensus 143 erQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a~ 220 (258)
T COG1120 143 ERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVAQ 220 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEee
Confidence 99999999999999999999999999999999999999999984 59999999999974 7789999999985 899999
Q ss_pred cCCCc
Q 000628 1090 GPLGH 1094 (1383)
Q Consensus 1090 g~~~~ 1094 (1383)
|++.+
T Consensus 221 G~p~e 225 (258)
T COG1120 221 GTPEE 225 (258)
T ss_pred cCcch
Confidence 98754
No 55
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-41 Score=382.05 Aligned_cols=217 Identities=29% Similarity=0.407 Sum_probs=193.0
Q ss_pred eeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCc-ceEEEecCCCCCCCCCCHHH
Q 000628 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ-RTCAYISQHDLHHGEMTVRE 264 (1383)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~-~~~~yv~Q~~~~~~~lTV~E 264 (1383)
+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..++ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998774 88999999999999999999
Q ss_pred HHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCC
Q 000628 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1383)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 344 (1383)
|+.|+.+.++... .+.+.+++.+.+.|+|++..|+...+ ||
T Consensus 95 Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~r~P~~-----LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLNRKPLQ-----LS 135 (338)
T ss_pred HhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 9999987765321 11233577889999999999999876 99
Q ss_pred hHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEE
Q 000628 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1383)
Q Consensus 345 GGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~ 424 (1383)
|||||||++||||+.+|++++||||+|.||+..+.++...|+++.+..+.|+|..+ |+..|+..++|+|++|++|++..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVT-HDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVT-HDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEc-CCHHHHHhhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999999999998887777766665 55679999999999999999999
Q ss_pred ecChhHHHHHHHhcCCCCCCCCChhHHHH
Q 000628 425 QGPRDNVLEFFEHMGFKCPERKGVADFLQ 453 (1383)
Q Consensus 425 ~G~~~~~~~~f~~lGf~~p~~~~~adfl~ 453 (1383)
.|++.++- ..|.+.-+|.|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999984 4567666777654
No 56
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.8e-41 Score=364.51 Aligned_cols=224 Identities=27% Similarity=0.356 Sum_probs=194.5
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC------cceEEEecCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDL 255 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~~~ 255 (1383)
...++|+|||++|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|.++..... |+.||+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999998 9999999988876542 578999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1383)
++...||.||++|..+..+... .+.+.++.++++.+||++.+|...
T Consensus 94 LLssrTV~~NvA~PLeiag~~k----------------------------------~ei~~RV~elLelVgL~dk~~~yP 139 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVPK----------------------------------AEIKQRVAELLELVGLSDKADRYP 139 (339)
T ss_pred ccccchHHhhhhhhHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhccCc
Confidence 9999999999999877655321 112345778999999999999998
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
.+ |||||||||+|||||+.+|+||++|||||+|||.|+..|.++|+++.+.+|.|+++..|+. .-+-+.||+|.
T Consensus 140 ~q-----LSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm-~Vvk~ic~rVa 213 (339)
T COG1135 140 AQ-----LSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEM-EVVKRICDRVA 213 (339)
T ss_pred hh-----cCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechH-HHHHHHhhhhe
Confidence 77 9999999999999999999999999999999999999999999999999998888877664 46778999999
Q ss_pred EEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhc
Q 000628 416 LLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEVT 456 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v~ 456 (1383)
+|++|+++++|+..++. ..|.+.-.-+|+.+..
T Consensus 214 vm~~G~lvE~G~v~~vF--------~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEVF--------ANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHhh--------cCcchHHHHHHHHhhc
Confidence 99999999999998873 3465555556665544
No 57
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-41 Score=352.73 Aligned_cols=221 Identities=29% Similarity=0.380 Sum_probs=186.1
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|++-.++ +++++|+|||+.|++||++||+|+|||||||||++|.|..+ +.+|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 467777764432 45789999999999999999999999999999999999765 4589999999764
Q ss_pred Ch------hcccceEEEEccCCCCCCCCCHHHHHHHHHH-----hhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCC
Q 000628 934 NQ------ETFARVSGYCEQNDIHSPYVTVYESLLYSAW-----LRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLP 1002 (1383)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~-----l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~ 1002 (1383)
.. ..+++.+||++|++.+.+.+||.+|++.+.. ++.-.....++.+..+-++|+.+|+.+.+.+..
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 3457889999999999999999999987632 221123333455566889999999999888774
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+.|||||+|||+|||||+.+|+||+.|||+++|||.+++.||+.|+++.++ |.|||++.|+.+. ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 479999999999999999999999999999999999999999999999754 9999999999764 567899999997
Q ss_pred cCcEEEEecCCCcc
Q 000628 1082 RGGRVIYAGPLGHE 1095 (1383)
Q Consensus 1082 ~gG~~~~~g~~~~~ 1095 (1383)
.|+++|+||..+.
T Consensus 223 -~G~ivfDg~~~el 235 (258)
T COG3638 223 -AGRIVFDGPASEL 235 (258)
T ss_pred -CCcEEEeCChhhh
Confidence 5899999998653
No 58
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.6e-40 Score=381.90 Aligned_cols=212 Identities=32% Similarity=0.476 Sum_probs=185.3
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC--CCcceEEEecCCCCCCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF--VPQRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~l 260 (1383)
.+.+|+|||++|++|++++|+||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 578999999999999999999999999999999999999997 99999999987653 3457899999999999999
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||+|||.|.+++.+.... .....++++++.+||++..++.+++
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~~~~~~--- 136 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKANKKVRT--- 136 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhCcchhh---
Confidence 999999999888764310 0112467899999999866666665
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
||+||||||+||.||+++|++|||||||+||||.++.++++.|+++++..+.|++++.|+ ..++..+||+|++|++|
T Consensus 137 --lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~-l~e~~~~~d~v~il~~G 213 (293)
T COG1131 137 --LSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHI-LEEAEELCDRVIILNDG 213 (293)
T ss_pred --cCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCc-HHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999998655677777655 45899999999999999
Q ss_pred eEEEecChhHHHHHHHh
Q 000628 421 QIVYQGPRDNVLEFFEH 437 (1383)
Q Consensus 421 ~iv~~G~~~~~~~~f~~ 437 (1383)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998765543
No 59
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-40 Score=358.03 Aligned_cols=193 Identities=30% Similarity=0.460 Sum_probs=167.9
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hccc-ceEEEEccCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFA-RVSGYCEQNDIHS 952 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~-~~~gyv~Q~~~~~ 952 (1383)
..+|++||++|++||+++|||||||||||||++|.|...+ .+|.+.++|.+... ..+| +.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999997664 57999999976532 2233 5699999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000628 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLND-SMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1383)
Q Consensus 953 ~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1383)
|.+||.||+.+...+... .....++.++++++.+||.+..+ .. +..|||||||||+|||||+.+|+|||.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987755432 22255667899999999987666 54 4589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
|||.+||+.+.+.|+++++++.++ |+|||++||++ ++...||+++.|.+ |+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~d-G~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKD-GK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeC-Ce
Confidence 999999999999999999999765 99999999996 57889999999986 55
No 60
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-41 Score=343.43 Aligned_cols=202 Identities=30% Similarity=0.408 Sum_probs=184.3
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC--hhcccceEEEEccCCCCCCCCCH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN--QETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~--~~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
.++++||||+++.||++||+|+|||||||+|++|++...+ .+|.|+++|.+.. +...++.+|.++.+..++..||+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 3499999999999999999999999999999999998763 4899999999853 35578899999988889999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
+|||.|.+.+. +....+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 99999999886 45567778899999999999999999976 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
|..+.+.+.+.++++.++|++||++||.+. |+...||+++++.+ |++++.|.+.
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 999999999999999988999999999975 77779999999985 8999999864
No 61
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.4e-40 Score=397.08 Aligned_cols=213 Identities=24% Similarity=0.432 Sum_probs=184.1
Q ss_pred CCcccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCC
Q 000628 179 SKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL 255 (1383)
Q Consensus 179 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~ 255 (1383)
+.+++.+||+|+|++|+|||.|||+||||+||||+.++|..+|+|+ +|+|++||+|+.+.++ ++.||+|.|+|.
T Consensus 476 P~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPv 552 (716)
T KOG0058|consen 476 PTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPV 552 (716)
T ss_pred CCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccce
Confidence 4456678999999999999999999999999999999999999998 9999999999988875 588999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1383)
+|. -||+|||.|+.. ..+.|+.+.|+..++.+ +. +.++++.+||.|
T Consensus 553 LFs-~sI~eNI~YG~~-------------------------~~t~e~i~~AAk~ANah-----~F---I~~~p~gY~T~V 598 (716)
T KOG0058|consen 553 LFS-GSIRENIAYGLD-------------------------NATDEEIEAAAKMANAH-----EF---ITNFPDGYNTVV 598 (716)
T ss_pred eec-ccHHHHHhcCCC-------------------------CCCHHHHHHHHHHhChH-----HH---HHhCcccccccc
Confidence 996 599999999733 23344555566655543 33 346999999999
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
|+ .+..||||||||++|||||+++|.||||||.||+||+.+...+.+.|.+..+ ++|+++.-|. .++.+.+|+|+
T Consensus 599 GE-kG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlvIAHR--LSTV~~Ad~Iv 673 (716)
T KOG0058|consen 599 GE-KGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLVIAHR--LSTVRHADQIV 673 (716)
T ss_pred CC-ccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEEEehh--hhHhhhccEEE
Confidence 97 3345999999999999999999999999999999999999999999998876 4777776553 47899999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 000628 416 LLSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1383)
++++|++++.|+++|+++
T Consensus 674 vi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 674 VIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEcCCeEEecccHHHHhh
Confidence 999999999999999975
No 62
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-40 Score=348.86 Aligned_cols=208 Identities=27% Similarity=0.401 Sum_probs=184.8
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCCCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGE 259 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~ 259 (1383)
.+.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||+++.+.. .|+.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 567999999999999999999999999999999999999998 999999999987754 36899999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc--cccccccC
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI--CADTMVGD 337 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~ 337 (1383)
+||.|||.+-..+.+-.. ++.+.+++++|+.+||+. ..+....+
T Consensus 90 ~Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~~~~~RyP~e 135 (309)
T COG1125 90 LTVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPSEYADRYPHE 135 (309)
T ss_pred ccHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHHHHhhcCchh
Confidence 999999998655544211 112345788999999974 66777665
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||+|||.+||||+.+|+|++||||+++|||.++.++.+.++++.+..++|+|.. +|...|.+.++|+|++|
T Consensus 136 -----LSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfV-THDidEA~kLadri~vm 209 (309)
T COG1125 136 -----LSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFV-THDIDEALKLADRIAVM 209 (309)
T ss_pred -----cCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEE-ecCHHHHHhhhceEEEe
Confidence 999999999999999999999999999999999999999999999998888887766 46778999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000628 418 SEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1383)
++|+++..+++++++.
T Consensus 210 ~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 210 DAGEIVQYDTPDEILA 225 (309)
T ss_pred cCCeEEEeCCHHHHHh
Confidence 9999999999999974
No 63
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-40 Score=360.71 Aligned_cols=206 Identities=30% Similarity=0.469 Sum_probs=186.0
Q ss_pred ccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc---cCCh-hcccceEEEEccCCCCCC
Q 000628 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY---PKNQ-ETFARVSGYCEQNDIHSP 953 (1383)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~ 953 (1383)
+...+++|||+.|+.||++||+|||||||||||++|||..++ ..|.|.+||. +.++ ....|.+|||+|+..+++
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 345689999999999999999999999999999999998774 4899999998 5544 234578999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000628 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1383)
Q Consensus 954 ~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1383)
+|||.||+.|+...+ ...+++.+++.+++++|+.++|+++.+.+ +.+|||||||||++||||+.+|++|+||||
T Consensus 91 HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEP 164 (345)
T COG1118 91 HMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEP 164 (345)
T ss_pred cchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCC
Confidence 999999999998776 34456677888999999999999999988 568999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1034 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
.++||+.-+..+.+.|+++.+. |.|+|++|||+. |..+.+|++++|++ |+|+..||+.
T Consensus 165 f~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 165 FGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 9999999999999999999876 999999999986 89999999999985 8999999874
No 64
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=379.22 Aligned_cols=223 Identities=29% Similarity=0.421 Sum_probs=197.2
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lT 261 (1383)
...+|+|+|+.|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+ +|.+++|+|+..+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 567999999999999999999999999999999999999998 9999999999998776 588999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.|+.+.+.... +++ ...+++++++.++|++.++..+.+
T Consensus 94 V~~NVafGLk~~~~~~-------------------~~~--------------i~~rv~e~L~lV~L~~~~~R~p~q---- 136 (352)
T COG3842 94 VEENVAFGLKVRKKLK-------------------KAE--------------IKARVEEALELVGLEGFADRKPHQ---- 136 (352)
T ss_pred HHHHhhhhhhhcCCCC-------------------HHH--------------HHHHHHHHHHHcCchhhhhhChhh----
Confidence 9999999977432111 011 123578899999999999988877
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||++||||+.+|++|+||||.|+||..-+.++...|+++.+..|.|.|... |+..|.+.++|+|++|++|+
T Consensus 137 -LSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VT-HDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 137 -LSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVT-HDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred -hChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEE-CCHHHHhhhccceEEccCCc
Confidence 9999999999999999999999999999999999999999999999998887776665 55679999999999999999
Q ss_pred EEEecChhHHHHHHHhcCCCCCCCCChhHHHHhh
Q 000628 422 IVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEV 455 (1383)
Q Consensus 422 iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v 455 (1383)
|...|+++|+ |..|...-+|+|+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 4567777888888653
No 65
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.6e-40 Score=334.15 Aligned_cols=212 Identities=28% Similarity=0.382 Sum_probs=181.1
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.|+||+-.++ +.+++|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~------------~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYP------------GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcC------------CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 46777764332 23569999999999999999999999999999999999655 34799999999864
Q ss_pred h------hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000628 935 Q------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 935 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1383)
. .-+||.||+|+||..+.++.||+||+.|...... .+..+.++++.++|+.+||.+..+.. +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 3 1257899999999999999999999999877653 44567788899999999999988876 56899
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhc-eEEEEecCcEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD-ELLLLKRGGRVI 1087 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d-~~~~l~~gG~~~ 1087 (1383)
|||||||+||||++.+|++|+.||||.+|||..+..|++++.++...|.|||+.||+. ++.+... +++.+. .|+++
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~-~Grl~ 216 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALE-DGRLV 216 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEe-CCEEE
Confidence 9999999999999999999999999999999999999999999998999999999984 5666555 556665 58888
Q ss_pred EecC
Q 000628 1088 YAGP 1091 (1383)
Q Consensus 1088 ~~g~ 1091 (1383)
.+..
T Consensus 217 ~d~~ 220 (223)
T COG2884 217 RDES 220 (223)
T ss_pred eccc
Confidence 7654
No 66
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.6e-40 Score=362.27 Aligned_cols=211 Identities=29% Similarity=0.428 Sum_probs=182.7
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~ 259 (1383)
+++||+|+|+++++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+... .+.+|||||.+...+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 457999999999999999999999999999999999999997 9999999999987664 3789999999988889
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+|-+.++..-.... + ...+ .+....++..|+.+|+.+.+++.+.+
T Consensus 91 ~tV~d~V~~GR~p~~~~--~---~~~~-------------------------~~D~~~v~~aL~~~~~~~la~r~~~~-- 138 (258)
T COG1120 91 LTVYELVLLGRYPHLGL--F---GRPS-------------------------KEDEEIVEEALELLGLEHLADRPVDE-- 138 (258)
T ss_pred cEEeehHhhcCCccccc--c---cCCC-------------------------HhHHHHHHHHHHHhCcHHHhcCcccc--
Confidence 99999999874321000 0 0000 01122467789999999999999988
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||.||+||+.+|++|+||||||+||...+.++++.++++++..+.|+|+++|.+ ..+.++||++++|++
T Consensus 139 ---LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDl-N~A~ryad~~i~lk~ 214 (258)
T COG1120 139 ---LSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDL-NLAARYADHLILLKD 214 (258)
T ss_pred ---cChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999988788888877654 588899999999999
Q ss_pred CeEEEecChhHHH
Q 000628 420 GQIVYQGPRDNVL 432 (1383)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1383)
|+++.+|++++++
T Consensus 215 G~i~a~G~p~evl 227 (258)
T COG1120 215 GKIVAQGTPEEVL 227 (258)
T ss_pred CeEEeecCcchhc
Confidence 9999999998875
No 67
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-40 Score=339.74 Aligned_cols=218 Identities=24% Similarity=0.341 Sum_probs=185.4
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCC---CCCceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGR---KTGGYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~---~~~g~~~G~i~i~g 930 (1383)
.++.+|++.++ +++++|+|||+.|++++++||||||||||||||++|... ..+-.++|+|.++|
T Consensus 7 ~~~~~~l~~yY-------------g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYY-------------GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEE-------------CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 46777777655 356799999999999999999999999999999999983 23446789999999
Q ss_pred ccCC-----hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000628 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1383)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1383)
.++. ...+|+.+|+|+|.|.-|| +|++||+.|+.++....+ ++.++.|++.|+...|++-........ ..
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s-a~ 148 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS-AL 148 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC-cc
Confidence 8753 3457899999999999999 999999999988765433 677888999999999976433222222 34
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
+|||||+|||||||+|+.+|+|||||||||+|||.+...|-+++.+++ +.-|||++||.+. ......|+..++.. |+
T Consensus 149 ~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~ 225 (253)
T COG1117 149 GLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GE 225 (253)
T ss_pred CCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cE
Confidence 799999999999999999999999999999999999999999999998 5799999999875 57778899999985 89
Q ss_pred EEEecCC
Q 000628 1086 VIYAGPL 1092 (1383)
Q Consensus 1086 ~~~~g~~ 1092 (1383)
+++.|+.
T Consensus 226 LvE~g~T 232 (253)
T COG1117 226 LVEFGPT 232 (253)
T ss_pred EEEEcCH
Confidence 9999986
No 68
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=354.38 Aligned_cols=207 Identities=28% Similarity=0.442 Sum_probs=175.4
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCC---CCCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQH---DLHHGEMT 261 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~---~~~~~~lT 261 (1383)
++|+|||+++++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+......+..||||||. |+-|| +|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-IT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cC
Confidence 5999999999999999999999999999999999999997 99999999988776666789999996 44454 79
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+|.+..+.--+. ....... ++.+..+++.|+.+|+.+.+|..+|+
T Consensus 94 V~d~V~~g~~~~~-----g~~~~~~-------------------------~~d~~~v~~aL~~Vgm~~~~~r~i~~---- 139 (254)
T COG1121 94 VKDVVLLGRYGKK-----GWFRRLN-------------------------KKDKEKVDEALERVGMEDLRDRQIGE---- 139 (254)
T ss_pred HHHHHHccCcccc-----ccccccc-------------------------HHHHHHHHHHHHHcCchhhhCCcccc----
Confidence 9999988622111 0011111 11233578899999999999999999
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||+|||-|||||+.+|++|+|||||+|+|+.++..|.+.|+++.+. |+|++++ +|+...+.++||+|+.|+ ++
T Consensus 140 -LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e-g~tIl~v-tHDL~~v~~~~D~vi~Ln-~~ 215 (254)
T COG1121 140 -LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE-GKTVLMV-THDLGLVMAYFDRVICLN-RH 215 (254)
T ss_pred -cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEE-eCCcHHhHhhCCEEEEEc-Ce
Confidence 9999999999999999999999999999999999999999999999987 7777666 456678999999999995 66
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
+++.|+++++.+
T Consensus 216 ~~~~G~~~~~~~ 227 (254)
T COG1121 216 LIASGPPEEVLT 227 (254)
T ss_pred eEeccChhhccC
Confidence 889999998753
No 69
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-40 Score=375.28 Aligned_cols=201 Identities=28% Similarity=0.424 Sum_probs=184.2
Q ss_pred EeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-hcccceEEEEccCCCCCCCCCHHHH
Q 000628 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYES 960 (1383)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 960 (1383)
+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.|+|.+.+. ...+|.+++|+|+..+||+|||+||
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~N 95 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYEN 95 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHH
Confidence 9999999999999999999999999999999999876 458999999998765 4456889999999999999999999
Q ss_pred HHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHH
Q 000628 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1040 (1383)
Q Consensus 961 l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~ 1040 (1383)
+.|+.+++ ..++++.+++|.++.+.++|.++.|++ +++|||||||||+|||||+++|++++||||.|+||+.
T Consensus 96 iaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~ 167 (338)
T COG3839 96 IAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAK 167 (338)
T ss_pred hhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHH
Confidence 99998776 345678889999999999999999998 4689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1041 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1041 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
.+..+...|+++.++ |.|+|.+|||. .|...++|++++|. +|++...|++.+
T Consensus 168 lR~~mr~ei~~lh~~l~~T~IYVTHDq-~EAmtladri~Vm~-~G~i~Q~g~p~e 220 (338)
T COG3839 168 LRVLMRSEIKKLHERLGTTTIYVTHDQ-VEAMTLADRIVVMN-DGRIQQVGTPLE 220 (338)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEcCCH-HHHHhhCCEEEEEe-CCeeeecCChHH
Confidence 999999999998765 89999999997 48889999999998 589999998743
No 70
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-40 Score=355.94 Aligned_cols=223 Identities=30% Similarity=0.476 Sum_probs=188.3
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCe---eCCCCCC-cceEEEecCCCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGH---ELNEFVP-QRTCAYISQHDLHH 257 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~---~~~~~~~-~~~~~yv~Q~~~~~ 257 (1383)
....+++|||+.|+.||+++|+|||||||||||++|||+..|+ +|+|.+||. +.+.... .|.||||+|+..+|
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF 89 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALF 89 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhc
Confidence 3456899999999999999999999999999999999999998 999999999 5555333 47899999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
++|||.+||.|+.+++.. + |++ .+.+..++++|+.+.|++.++...-+
T Consensus 90 ~HmtVa~NIAFGl~~~~~--~-----------------p~~-------------~~~r~rv~elL~lvqL~~la~ryP~Q 137 (345)
T COG1118 90 PHMTVADNIAFGLKVRKE--R-----------------PSE-------------AEIRARVEELLRLVQLEGLADRYPAQ 137 (345)
T ss_pred ccchHHhhhhhccccccc--C-----------------CCh-------------hhHHHHHHHHHHHhcccchhhcCchh
Confidence 999999999999876521 0 100 11233567789999999988888766
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||++||||+..|++|+||||+++||++.+.++.+.|+++.+..+.|++... |+..|++++||+|++|
T Consensus 138 -----LSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVT-HD~eea~~ladrvvvl 211 (345)
T COG1118 138 -----LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVT-HDQEEALELADRVVVL 211 (345)
T ss_pred -----cChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEe-CCHHHHHhhcceEEEe
Confidence 9999999999999999999999999999999999999999999999887777766654 5667999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHH
Q 000628 418 SEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQ 453 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~ 453 (1383)
++|+|...||++|+-+ .|...-++.|+-
T Consensus 212 ~~G~Ieqvg~p~ev~~--------~P~s~fV~~f~G 239 (345)
T COG1118 212 NQGRIEQVGPPDEVYD--------HPASRFVARFLG 239 (345)
T ss_pred cCCeeeeeCCHHHHhc--------CCCccceecccc
Confidence 9999999999999843 355444455543
No 71
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=5.8e-35 Score=393.68 Aligned_cols=216 Identities=22% Similarity=0.365 Sum_probs=184.9
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++++|++..++ .+++.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~-----------~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFE-----------PSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEec-----------CCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 4678888876542 123569999999999999999999999999999999999865 348999999987
Q ss_pred CCh--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 933 KNQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 933 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. ...++.++.++++++.++|.+..++.+ ++||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 642 2356779999999999999999999999876543 223344567899999999998888774 579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
|||||+||+||+.+|+||||||||+|||+.+++.++++|++++ +|+|||++||+++ ++...+|++++|.+ |++++.|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999976 56678999999985 8999998
Q ss_pred CC
Q 000628 1091 PL 1092 (1383)
Q Consensus 1091 ~~ 1092 (1383)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 75
No 72
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.7e-39 Score=341.59 Aligned_cols=210 Identities=25% Similarity=0.400 Sum_probs=180.5
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC------cceEEEecCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDL 255 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~~~ 255 (1383)
..+.|++|||+.|++||+++|+|||||||||||++|.|+++|+ +|+|.++|+++..... ++.+|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 4567999999999999999999999999999999999999998 9999999999866542 467999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccc-cccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC-ADTM 334 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~-~dt~ 334 (1383)
+|..+||.||+.|-.+-.. ++ |...+ +..+..-|+..||... +|..
T Consensus 96 LFssltV~eNVafplre~~---------~l----------p~~~i--------------~~lv~~KL~~VGL~~~~~~~~ 142 (263)
T COG1127 96 LFSSLTVFENVAFPLREHT---------KL----------PESLI--------------RELVLMKLELVGLRGAAADLY 142 (263)
T ss_pred cccccchhHhhheehHhhc---------cC----------CHHHH--------------HHHHHHHHHhcCCChhhhhhC
Confidence 9999999999999543211 01 11111 1234445788999876 7777
Q ss_pred ccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
..+ ||||++||+++|||++.+|+++|+||||+||||.++..+.++++++.+..+.|+++..| +.++++..+|+|
T Consensus 143 PsE-----LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTH-Dl~s~~~i~Drv 216 (263)
T COG1127 143 PSE-----LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTH-DLDSLLTIADRV 216 (263)
T ss_pred chh-----hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEEC-ChHHHHhhhceE
Confidence 776 99999999999999999999999999999999999999999999999988888777765 567999999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000628 415 ILLSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~~ 433 (1383)
++|.+|+|+..|+++++.+
T Consensus 217 ~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 217 AVLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999864
No 73
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=373.21 Aligned_cols=205 Identities=27% Similarity=0.399 Sum_probs=184.4
Q ss_pred ccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh-cccceEEEEccCCCCCCCCC
Q 000628 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVT 956 (1383)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lT 956 (1383)
++..+|+|||++|++||+++|+|||||||||||++|||...+ .+|+|.++|.++... ..+|.+|+|+|+..+||+||
T Consensus 16 g~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 16 GDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 457899999999999999999999999999999999998763 489999999987653 35688999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCC
Q 000628 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1383)
Q Consensus 957 v~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1036 (1383)
|+||+.|+.+++. ...+++.+++++++++.++|.+..++. +..|||||||||+|||||+.+|++|+||||.|+
T Consensus 94 V~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSa 166 (352)
T COG3842 94 VEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQQRVALARALVPEPKVLLLDEPLSA 166 (352)
T ss_pred HHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHHHHHHHHHHhhcCcchhhhcCcccc
Confidence 9999999987442 344566788999999999999999887 458999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1037 LDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
||..-+..++..++++.++ |.|.|++|||.. |...++|++.+|++ |++.-.|++.
T Consensus 167 LD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gtP~ 222 (352)
T COG3842 167 LDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGTPE 222 (352)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCCHH
Confidence 9999999999999998754 999999999975 78889999999975 8999999874
No 74
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-39 Score=346.68 Aligned_cols=192 Identities=25% Similarity=0.344 Sum_probs=170.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 263 (1383)
..+|+|+|++|++||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|.+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 57999999999999999999999999999999999999998 999999999883 3567899999999999999999
Q ss_pred HHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCC
Q 000628 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1383)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1383)
||+.|+....+... . +....++..|+.+||.+..|....+ |
T Consensus 91 ~NV~l~l~~~~~~~----------~------------------------e~~~~a~~~L~~VgL~~~~~~~P~q-----L 131 (248)
T COG1116 91 DNVALGLELRGKSK----------A------------------------EARERAKELLELVGLAGFEDKYPHQ-----L 131 (248)
T ss_pred hhheehhhccccch----------H------------------------hHHHHHHHHHHHcCCcchhhcCccc-----c
Confidence 99999877654211 0 0112467789999999999998877 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+..+.|+++.+ |.-.|...++|+|++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVT-Hdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVT-HDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEe-CCHHHHHhhhCEEEEecCC
Confidence 999999999999999999999999999999999999999999999887777776665 5667999999999999983
No 75
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=333.07 Aligned_cols=212 Identities=31% Similarity=0.366 Sum_probs=184.9
Q ss_pred CCCcccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--CcceEEEecCCCC
Q 000628 178 PSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDL 255 (1383)
Q Consensus 178 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~ 255 (1383)
++++...++++||||.++.|++++|+|||||||||+|++|++++.|+ +|+|++||.+..... .++.+|.++.+..
T Consensus 9 K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~g 85 (245)
T COG4555 9 KSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERG 85 (245)
T ss_pred hhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcC
Confidence 34444556999999999999999999999999999999999999998 999999998875432 3688999998889
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1383)
++..||++|||.|.+++.+. ++. +.+.+++.+.+.|+|.+|.|+.+
T Consensus 86 lY~RlT~rEnl~~Fa~L~~l----------~~~------------------------~~kari~~l~k~l~l~~~~~rRv 131 (245)
T COG4555 86 LYARLTARENLKYFARLNGL----------SRK------------------------EIKARIAELSKRLQLLEYLDRRV 131 (245)
T ss_pred hhhhhhHHHHHHHHHHHhhh----------hhh------------------------HHHHHHHHHHHHhChHHHHHHHH
Confidence 99999999999998876542 121 12335778899999999999999
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
|+ +|-|+||||+|||||+++|++++|||||||||..+...+.+.++++.. .++++|.+ .|..+|+..+||+|+
T Consensus 132 ~~-----~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~-egr~viFS-SH~m~EvealCDrvi 204 (245)
T COG4555 132 GE-----FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN-EGRAVIFS-SHIMQEVEALCDRVI 204 (245)
T ss_pred hh-----hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc-CCcEEEEe-cccHHHHHHhhheEE
Confidence 98 999999999999999999999999999999999999999999999865 36666666 567789999999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 000628 416 LLSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1383)
+|++|++++.|+.+++..
T Consensus 205 vlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 205 VLHKGEVVLEGSIEALDA 222 (245)
T ss_pred EEecCcEEEcCCHHHHHH
Confidence 999999999999988754
No 76
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.3e-38 Score=369.56 Aligned_cols=214 Identities=28% Similarity=0.396 Sum_probs=185.1
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|++..++ ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEec
Confidence 577888776542 3569999999999999999999999999999999999765 3479999999876
Q ss_pred Ch--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000628 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1383)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1383)
.. ...++.+|||+|++.+++.+||+||+.|.+.++. ....+..++++++++.++|.+..++.+ ++|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 2356789999999999999999999998765542 233444556889999999988888774 4799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999986 67788999999985 89999998
Q ss_pred C
Q 000628 1092 L 1092 (1383)
Q Consensus 1092 ~ 1092 (1383)
+
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 6
No 77
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-39 Score=339.84 Aligned_cols=217 Identities=26% Similarity=0.365 Sum_probs=184.1
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC------cceEEEecCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDL 255 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~~~ 255 (1383)
.+.++|+|||+.|++||+++|+|||||||||||++|.|..+++ +|+|.+||.++..... ++.+||++|++.
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 4567999999999999999999999999999999999999987 9999999988765542 468999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1383)
+.+.+||.+|+..+..-+. +.++.+ .+..+.++ +..+-..|+.+|+.+.+-+..
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~~~sl---------fglfsk~d---------------k~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--STWRSL---------FGLFSKED---------------KAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hHHHHH---------hCCCCHHH---------------HHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999988643221 111111 12222111 122345788999999999988
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
++ |||||+|||+|||||+.+|++++-|||+++|||.++.++++.|+++.+..|.|+|+.+||- .-+.++||||+
T Consensus 146 ~~-----LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~v-dlA~~Y~~Rii 219 (258)
T COG3638 146 ST-----LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQV-DLAKKYADRII 219 (258)
T ss_pred cc-----CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechH-HHHHHHHhhhe
Confidence 87 9999999999999999999999999999999999999999999999998899999998875 46789999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 000628 416 LLSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1383)
-|++|+|+|.||++++-+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999998754
No 78
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.4e-38 Score=398.60 Aligned_cols=207 Identities=29% Similarity=0.466 Sum_probs=183.9
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 261 (1383)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||+++++..+ |+.++||+|++.+|. -|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFS-GS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhhc-Cc
Confidence 5899999999999999999999999999999999999998 9999999999987764 689999999999885 59
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.++. |+.+.++.++|+..++.+.. +..++..+||.||+ ++.
T Consensus 563 I~eNi~l~~-------------------------p~~~~e~i~~A~~~ag~~~f--------I~~lP~gy~t~v~E-~G~ 608 (709)
T COG2274 563 IRENIALGN-------------------------PEATDEEIIEAAQLAGAHEF--------IENLPMGYDTPVGE-GGA 608 (709)
T ss_pred HHHHHhcCC-------------------------CCCCHHHHHHHHHHhCcHHH--------HHhccccccccccc-CCC
Confidence 999998852 33445566777777665432 34689999999996 677
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
+||||||||++|||||+++|+||+||||||+||+.+...|.+.|+++.+ ++|+|+..|.+ .+.+.||+|+||++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~IaHRl--~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVIIIAHRL--STIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEEEEccc--hHhhhccEEEEccCCc
Confidence 8999999999999999999999999999999999999999999999875 67888887765 6899999999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
++.+|+++|+++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999986
No 79
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.7e-38 Score=340.92 Aligned_cols=195 Identities=26% Similarity=0.405 Sum_probs=170.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-------cceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~ 256 (1383)
.++|++||+.|++||+++|+|||||||||||++|.|...|+ +|.|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 68999999999999999999999999999999999999997 9999999998876542 3579999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccccc-ccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICAD-TMV 335 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d-t~v 335 (1383)
+|++||+||+.+.....+.... ......+.+++.+||++..+ ..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~p 140 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKKP 140 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCCc
Confidence 9999999999986555443210 01223567889999997666 778
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
.+ |||||||||+|||||+.+|++++.||||.+||+.++..|++.++++.+..++|+|+++|.| ++...||+++
T Consensus 141 ~e-----LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i 213 (226)
T COG1136 141 SE-----LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVI 213 (226)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEE
Confidence 77 9999999999999999999999999999999999999999999999988788888887754 7889999999
Q ss_pred EEcCCeE
Q 000628 416 LLSEGQI 422 (1383)
Q Consensus 416 lL~~G~i 422 (1383)
.|.+|++
T Consensus 214 ~l~dG~~ 220 (226)
T COG1136 214 ELKDGKI 220 (226)
T ss_pred EEeCCee
Confidence 9999984
No 80
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4.7e-38 Score=367.66 Aligned_cols=217 Identities=24% Similarity=0.322 Sum_probs=184.2
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|++..++.. .....+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5677877655210 112469999999999999999999999999999999999866 34899999998764
Q ss_pred hh------cccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000628 935 QE------TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 935 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1383)
.. ..++.+||++|+..+++..||+||+.|..... ..++++.++++.++++.+||.+..|.. +..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~-----~~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSY-----PSNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 31 23668999999999999999999999876533 234455667789999999999888876 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1087 (1383)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999865 999999999975 46678999999974 8999
Q ss_pred EecCC
Q 000628 1088 YAGPL 1092 (1383)
Q Consensus 1088 ~~g~~ 1092 (1383)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 81
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.8e-39 Score=329.53 Aligned_cols=209 Identities=26% Similarity=0.361 Sum_probs=184.7
Q ss_pred cccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhc----ccceEEEEccCCC
Q 000628 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQET----FARVSGYCEQNDI 950 (1383)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~~ 950 (1383)
+.+++++++++||+.+++||++||+|||||||||.+.++.|...+ .+|.|.+||.+++... .+..+||+||++.
T Consensus 12 K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~S 89 (243)
T COG1137 12 KSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEAS 89 (243)
T ss_pred HhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccch
Confidence 345678899999999999999999999999999999999997663 3799999999876533 3446999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000628 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1383)
Q Consensus 951 ~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1383)
.|..+||+||++.....+.. +....+++.+++++|+.+++.++++.+. ..||||||+|+.|||||+.+|+.++|
T Consensus 90 IFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLL 163 (243)
T COG1137 90 IFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILL 163 (243)
T ss_pred HhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEe
Confidence 99999999999877666532 2333466667899999999999999874 37999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
|||++|+||.+...|+++++.+++.|..|++|-|... |....|||.+++.+ |++...|.++
T Consensus 164 DEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 164 DEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred cCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 9999999999999999999999999999999999986 78899999999985 8999999874
No 82
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.8e-38 Score=319.43 Aligned_cols=201 Identities=25% Similarity=0.403 Sum_probs=178.8
Q ss_pred eeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCHHHHHH
Q 000628 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTVRETLD 267 (1383)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~E~l~ 267 (1383)
.+++.|++||++||+||||||||||||+|+|+..|. +|+|.+||++.+...+ +|-+++++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 578899999999999999999999999999999997 9999999999977655 578999999999999999999998
Q ss_pred HhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHH
Q 000628 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1383)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1383)
++.. ++-+ +.. +..+.++.++...||..+.+...++ |||||
T Consensus 94 LGl~---P~Lk------L~a-------------------------~~r~~v~~aa~~vGl~~~~~RLP~~-----LSGGq 134 (231)
T COG3840 94 LGLS---PGLK------LNA-------------------------EQREKVEAAAAQVGLAGFLKRLPGE-----LSGGQ 134 (231)
T ss_pred ccCC---cccc------cCH-------------------------HHHHHHHHHHHHhChhhHhhhCccc-----cCchH
Confidence 8632 1111 000 1123467788999999999999988 99999
Q ss_pred HHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEEecC
Q 000628 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGP 427 (1383)
Q Consensus 348 kqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G~ 427 (1383)
||||++||+|+.+.+|++||||+|+|||.-+.++...+.+++.+.+.|+++..|||. ++.+++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999999998999999988876 8889999999999999999999
Q ss_pred hhHHH
Q 000628 428 RDNVL 432 (1383)
Q Consensus 428 ~~~~~ 432 (1383)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98764
No 83
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-38 Score=352.90 Aligned_cols=202 Identities=26% Similarity=0.386 Sum_probs=172.9
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1383)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 4699999999999999999999999999999999997653 47999999987532 234567999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000628 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1383)
Q Consensus 954 ~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1383)
.+||+||+.+...... ....++..+.++++++.++|.+..++.+ ..|||||||||+||++|+.+|+||+||||
T Consensus 91 ~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~llllDEP 163 (235)
T cd03261 91 SLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSGGMKKRVALARALALDPELLLYDEP 163 (235)
T ss_pred CCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 9999999988643221 1233444567889999999987776663 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1034 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|.+ |++++.|+.
T Consensus 164 t~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 221 (235)
T cd03261 164 TAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVAEGTP 221 (235)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEEecCH
Confidence 9999999999999999999864 899999999976 56778999999985 899998875
No 84
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-38 Score=368.23 Aligned_cols=215 Identities=25% Similarity=0.355 Sum_probs=185.2
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|++..++ +++.+|+|||+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 56777765441 23469999999999999999999999999999999999766 35899999998764
Q ss_pred h-hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000628 935 Q-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1383)
Q Consensus 935 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1383)
. ...++.+|||+|++.++|++||+||+.|....+ ..+..+..++++++++.++|.+..++.+ ..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 3 223478999999999999999999999986543 2344555677899999999998888774 579999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|. +|+++..|++
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~-~G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMN-GGVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEECCH
Confidence 999999999999999999999999999999999999998765 999999999985 6888999999997 5899999986
Q ss_pred C
Q 000628 1093 G 1093 (1383)
Q Consensus 1093 ~ 1093 (1383)
.
T Consensus 220 ~ 220 (356)
T PRK11650 220 V 220 (356)
T ss_pred H
Confidence 4
No 85
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1e-37 Score=367.47 Aligned_cols=215 Identities=26% Similarity=0.373 Sum_probs=186.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|++..++ .+.+|+|||+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 367778776542 3469999999999999999999999999999999999865 3589999999876
Q ss_pred Ch-hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000628 934 NQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1383)
Q Consensus 934 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1383)
.. ...+|.+|||+|+..++|++||+||+.|+...+ ..+..+.+++++++++.++|.+..++. +..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 43 224578999999999999999999999986543 234456667899999999999988876 458999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
|||+|||||+.+|++|||||||++||+.++..+.+.|+++.++ |.|+|++||+++ +....+|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 67889999999985 89999998
Q ss_pred CC
Q 000628 1092 LG 1093 (1383)
Q Consensus 1092 ~~ 1093 (1383)
+.
T Consensus 219 ~~ 220 (353)
T TIGR03265 219 PQ 220 (353)
T ss_pred HH
Confidence 64
No 86
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-38 Score=368.18 Aligned_cols=206 Identities=26% Similarity=0.369 Sum_probs=179.4
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 262 (1383)
+.+|+|+|+++++|++++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 46999999999999999999999999999999999999987 9999999999876543 4789999999999999999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.|+.+..+.. +. +....++.+++.+||++..+..+++
T Consensus 94 ~eNi~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~~----- 134 (356)
T PRK11650 94 RENMAYGLKIRGMP----------KA------------------------EIEERVAEAARILELEPLLDRKPRE----- 134 (356)
T ss_pred HHHHHhHHhhcCCC----------HH------------------------HHHHHHHHHHHHcCChhHhhCChhh-----
Confidence 99999975432210 00 0112356789999999988888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+|||||+.+|++|+|||||++||+.++.++.+.|+++.+..+.|+|++.|+ ..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd-~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHD-QVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999999987667777777655 4689999999999999999
Q ss_pred EEecChhHHH
Q 000628 423 VYQGPRDNVL 432 (1383)
Q Consensus 423 v~~G~~~~~~ 432 (1383)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999999874
No 87
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.5e-37 Score=361.48 Aligned_cols=206 Identities=25% Similarity=0.337 Sum_probs=178.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC------cceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~~~~~ 257 (1383)
+++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|+++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999997 9999999999876432 46799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+||+||+.|.....+... . +....+.++++.+||++..|..+++
T Consensus 95 ~~~tv~eni~~~~~~~~~~~--------------------~--------------~~~~~v~e~l~~vgL~~~~~~~~~~ 140 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK--------------------D--------------EIKRKVTELLALVGLGDKHDSYPSN 140 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH--------------------H--------------HHHHHHHHHHHHcCCchhhhCChhh
Confidence 99999999998644322100 0 0112356688999999988888876
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+|||||+.+|++|+|||||||||+.++..+.+.|+++.+..+.|+|++.|+ ...+.++||+|++|
T Consensus 141 -----LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~-~~~v~~~~d~v~vl 214 (343)
T TIGR02314 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHE-MDVVKRICDCVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999987667787777655 55788999999999
Q ss_pred cCCeEEEecChhHHH
Q 000628 418 SEGQIVYQGPRDNVL 432 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1383)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 88
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-37 Score=364.53 Aligned_cols=215 Identities=25% Similarity=0.390 Sum_probs=186.7
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 467888776542 3469999999999999999999999999999999999876 3489999999876
Q ss_pred Chh-cccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000628 934 NQE-TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1383)
Q Consensus 934 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1383)
... ..+|.+|||+|++.++|++||+||+.|....+. ..+.+.+++++++++.++|.++.++. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 432 234789999999999999999999999865432 34456677899999999999888776 457999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++...+|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 67889999999985 89999998
Q ss_pred CC
Q 000628 1092 LG 1093 (1383)
Q Consensus 1092 ~~ 1093 (1383)
+.
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 64
No 89
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-37 Score=359.95 Aligned_cols=229 Identities=24% Similarity=0.363 Sum_probs=190.3
Q ss_pred cCCCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceeeeeeEEEEeCCeEEEEEcCCCC
Q 000628 129 VGIEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPPGA 208 (1383)
Q Consensus 129 ~~~~~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 208 (1383)
..+..|+-+|+|+|++.+- .++++||+++||+|++||-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y---------------------------------~~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSY---------------------------------GPKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEe---------------------------------CCCCceecceeEEecCCCEEEEECCCCC
Confidence 4667788889999988852 1234599999999999999999999999
Q ss_pred CHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCCCHHHHHHHhhhccCCCchhhHHHHh
Q 000628 209 GKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAEL 285 (1383)
Q Consensus 209 GKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 285 (1383)
||||++++|.++++ + +|+|.+||+++.+..+ |+.||||||+..+|.+ ||.+||.|+..
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFnd-TIl~NI~YGn~-------------- 450 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFND-TILYNIKYGNP-------------- 450 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccch-hHHHHhhcCCC--------------
Confidence 99999999999998 4 8999999999987654 6789999999888865 99999998732
Q ss_pred hHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHHHHHHHHHHHHhcCCCEeE
Q 000628 286 SRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLY 365 (1383)
Q Consensus 286 ~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~ill 365 (1383)
+...++..++|..++- .|. ...|++.++|.||+. ++-|||||||||++|||++.+|+|++
T Consensus 451 -----------sas~eeV~e~~k~a~~-----hd~---i~~l~~GY~T~VGer-G~~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 451 -----------SASDEEVVEACKRAGL-----HDV---ISRLPDGYQTLVGER-GLMLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred -----------CcCHHHHHHHHHHcCc-----HHH---HHhccccchhhHhhc-ccccccchHHHHHHHHHHhcCCCeEE
Confidence 1222333344433332 222 235899999999982 33389999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHH
Q 000628 366 MDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 366 LDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G~~~~~~~ 433 (1383)
+|||||.||+.|..++++.+.+.. .++|+|+..|.. .+..-||+|++|++|++...|+++|++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~~--~~rTvI~IvH~l--~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDVM--SGRTVIMIVHRL--DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHhc--CCCeEEEEEecc--hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 999999999999999999999843 478998888754 6889999999999999999999999985
No 90
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.2e-37 Score=362.91 Aligned_cols=214 Identities=27% Similarity=0.381 Sum_probs=184.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|++..+ +++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 41 ~i~i~nl~k~y-------------~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~~ 105 (340)
T PRK13536 41 AIDLAGVSKSY-------------GDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVPV 105 (340)
T ss_pred eEEEEEEEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEEC
Confidence 47888887654 235699999999999999999999999999999999997663 489999999876
Q ss_pred Ch--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000628 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1383)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1383)
.. ...++.+||++|++.+++.+||.||+.+.+.++. ....+..+.++++++.++|.+..++.+ ++|||||
T Consensus 106 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~ 177 (340)
T PRK13536 106 PARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGM 177 (340)
T ss_pred CcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHH
Confidence 42 2356789999999999999999999987665432 223334456788999999998888774 4799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
||||+||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.|+
T Consensus 178 kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~ 255 (340)
T PRK13536 178 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGR 255 (340)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 67788999999985 89999998
Q ss_pred C
Q 000628 1092 L 1092 (1383)
Q Consensus 1092 ~ 1092 (1383)
+
T Consensus 256 ~ 256 (340)
T PRK13536 256 P 256 (340)
T ss_pred H
Confidence 6
No 91
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.3e-37 Score=361.76 Aligned_cols=202 Identities=27% Similarity=0.397 Sum_probs=176.3
Q ss_pred cceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCC
Q 000628 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVT 956 (1383)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 956 (1383)
++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 4579999999999999999999999999999999999765 347999999987532 234567999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCC
Q 000628 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1383)
Q Consensus 957 v~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1036 (1383)
|+||+.+.+.++. ....+.++.++++++.++|.+..++.+ +.|||||||||+||+||+.+|++|||||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 223444566899999999988777764 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999878999999999986 67778999999985 899999875
No 92
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-38 Score=323.72 Aligned_cols=222 Identities=24% Similarity=0.398 Sum_probs=175.2
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCCC-----CcceEEEecCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEFV-----PQRTCAYISQHDL 255 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~~~ 255 (1383)
.+++|+|||+.|+++++||++|||||||||||++|....+ |..+++|+|.++|+++.+.. .|+.+|+|+|.|.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 4569999999999999999999999999999999988754 34678999999999986542 3689999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-cccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 334 (1383)
-|| +|++||+.|+.+..|... +.+.++ ++.-|+.-+|- +..|.+
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~~ldei--------------------------------Ve~sLk~AaLWdEVKDrL 143 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--KELDEI--------------------------------VESSLKKAALWDEVKDRL 143 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--HHHHHH--------------------------------HHHHHHHhHhHHHhHHHh
Confidence 999 999999999998887543 111111 11112221221 111111
Q ss_pred ccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
= +...+|||||+||++|||||+-+|+||+||||||+|||.++..|-+++.++.+ +-|+|+.. |...++.+..|+.
T Consensus 144 ~--~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~--~yTIviVT-HnmqQAaRvSD~t 218 (253)
T COG1117 144 H--KSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK--KYTIVIVT-HNMQQAARVSDYT 218 (253)
T ss_pred h--CCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh--ccEEEEEe-CCHHHHHHHhHhh
Confidence 1 22456999999999999999999999999999999999999999999999985 45666554 5667899999999
Q ss_pred EEEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHH
Q 000628 415 ILLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFL 452 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl 452 (1383)
..+..|++++.|+.+++ |..|.++...||+
T Consensus 219 aFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 219 AFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 99999999999999887 3446666666654
No 93
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.2e-37 Score=365.07 Aligned_cols=215 Identities=24% Similarity=0.335 Sum_probs=186.0
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEE--EEEEEcCc
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIE--GDIKISGY 931 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~--G~i~i~g~ 931 (1383)
.++++|+++.+. +..+|+|||++|++||+++|+|||||||||||++|+|...+ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 467788776542 34699999999999999999999999999999999997653 46 99999998
Q ss_pred cCCh-hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 932 PKNQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 932 ~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
+... ...++.+|||+|++.++|.+||+||+.|....+ .....+.+++++++++.++|.+..++. ++.||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~-----~~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHL-----PAQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCC-----hhhCCHH
Confidence 7643 223577999999999999999999999986543 234455667799999999999988887 4589999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999976 67888999999985 89999
Q ss_pred ecCCC
Q 000628 1089 AGPLG 1093 (1383)
Q Consensus 1089 ~g~~~ 1093 (1383)
.|++.
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99864
No 94
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.1e-37 Score=364.82 Aligned_cols=207 Identities=28% Similarity=0.428 Sum_probs=180.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 262 (1383)
+.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ +|.++||+|++.+||++||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999987 9999999999875443 4789999999999999999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.|+.+.++.. +. +....++.+++.+||++..|+.+.+
T Consensus 94 ~eNi~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~l~L~~~~~~~~~~----- 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMG----------RA------------------------EVAERVAELLDLVGLPGSERKYPGQ----- 134 (353)
T ss_pred HHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCCchhhCChhh-----
Confidence 99999975432210 00 0112467789999999998888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+|||||+.+|+++|||||+++||+.++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~-~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQ-EEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876677877776654 589999999999999999
Q ss_pred EEecChhHHHH
Q 000628 423 VYQGPRDNVLE 433 (1383)
Q Consensus 423 v~~G~~~~~~~ 433 (1383)
++.|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (353)
T TIGR03265 214 EQVGTPQEIYR 224 (353)
T ss_pred EEEcCHHHHHh
Confidence 99999988753
No 95
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-37 Score=363.82 Aligned_cols=206 Identities=24% Similarity=0.386 Sum_probs=179.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 262 (1383)
..+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999997 9999999999876544 4789999999999999999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.|+.+.++... . +....++++++.+||.+..+..+.+
T Consensus 96 ~eNi~~~l~~~~~~~----------~------------------------~~~~~v~~~l~~~gl~~~~~r~~~~----- 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------E------------------------ERKQRVKEALELVDLAGFEDRYVDQ----- 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------H------------------------HHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 999999765332110 0 0112457789999999888888766
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+.|+|++.|+ ..++.+++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd-~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHD-QSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCC-HHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999987667777776554 5689999999999999999
Q ss_pred EEecChhHHH
Q 000628 423 VYQGPRDNVL 432 (1383)
Q Consensus 423 v~~G~~~~~~ 432 (1383)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 96
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=343.36 Aligned_cols=214 Identities=26% Similarity=0.369 Sum_probs=186.6
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|++|.++. +..+|+|+|++|++||.++|+|+||||||||+++|+|...+ .+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 567888876631 14799999999999999999999999999999999997663 4699999998854
Q ss_pred ----hhcccceEEEEccCCCCC-CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 935 ----QETFARVSGYCEQNDIHS-PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 935 ----~~~~~~~~gyv~Q~~~~~-~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
...+++.+|||+|++..+ ..-||.|.+.|+..- ...+.++.+++++++++.+++.+.+++. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 456788999999998654 467999999998643 3455667888999999999999998877 468999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
||||||+||.+|+.+|++|+|||||||||+.+++.+++.++++.++ |+|||++||+.+ .+.+.+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 699999999976 57777999999985 89999
Q ss_pred ecCC
Q 000628 1089 AGPL 1092 (1383)
Q Consensus 1089 ~g~~ 1092 (1383)
+|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 97
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-38 Score=333.08 Aligned_cols=217 Identities=26% Similarity=0.345 Sum_probs=178.2
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++.+|++..++... ....+|+|||+++.+||++||+|+||||||||.++|+|...+ ..|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 356777765543211 122599999999999999999999999999999999997663 589999999765
Q ss_pred Chh----cccceEEEEccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCC
Q 000628 934 NQE----TFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSG 1006 (1383)
Q Consensus 934 ~~~----~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~ 1006 (1383)
... .+++.+.+|+||+. +.|..||++.|.-.... ...++.+ +++.++++.+||.+ ..++. +..
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chh
Confidence 432 46788999999985 77999999988765433 2233333 33899999999965 44444 567
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
||||||||+||||||+.+|++|+||||||+||+..+..|+++|.++.++ |.|+|++|||.+ -+...|||+++|.+ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999765 889999999976 37778999999985 89
Q ss_pred EEEecCCC
Q 000628 1086 VIYAGPLG 1093 (1383)
Q Consensus 1086 ~~~~g~~~ 1093 (1383)
+++.+|.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999864
No 98
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-37 Score=341.32 Aligned_cols=199 Identities=30% Similarity=0.439 Sum_probs=169.1
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-hcccceEEEEccCCCCCCCCCHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVY 958 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1383)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 469999999999999999999999999999999999765 347999999987543 12346799999999999999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000628 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1383)
Q Consensus 959 E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1383)
||+.+..... ........+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 ~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD 162 (213)
T cd03259 91 ENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLSALD 162 (213)
T ss_pred HHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9998765332 1223344556889999999987777663 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1039 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 163 AKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999764 899999999975 56778999999985 7887654
No 99
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.1e-37 Score=361.47 Aligned_cols=208 Identities=22% Similarity=0.325 Sum_probs=180.0
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-------cceEEEecCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~ 255 (1383)
.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 456999999999999999999999999999999999999997 9999999999876543 468999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1383)
+++++||+||+.|+.+..+... . +....+..+++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPE----------Q------------------------ERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHhcCCchhhhCCh
Confidence 9999999999999755432110 0 01123566889999998888888
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
++ |||||||||+|||||+.+|+++||||||+|||+.++.++.+.++++.+..++|+|++.| ...++..++|+|+
T Consensus 128 ~~-----LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTH-d~~ea~~~~drI~ 201 (363)
T TIGR01186 128 DE-----LSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITH-DLDEAIRIGDRIV 201 (363)
T ss_pred hh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEE
Confidence 77 99999999999999999999999999999999999999999999997666777777655 4568899999999
Q ss_pred EEcCCeEEEecChhHHHH
Q 000628 416 LLSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1383)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999998753
No 100
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-36 Score=362.77 Aligned_cols=223 Identities=26% Similarity=0.430 Sum_probs=184.4
Q ss_pred cccccc-CCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEE
Q 000628 845 GMILPF-QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIE 923 (1383)
Q Consensus 845 g~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~ 923 (1383)
|...|. -...++|+||+|.++..+ +.++|+|+||+|+|||.+||+||||+||||+.++|-...+ +.+
T Consensus 455 G~~~p~~~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--Pts 522 (716)
T KOG0058|consen 455 GTLAPDHLQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTS 522 (716)
T ss_pred CccccccccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCC
Confidence 444442 345799999999997643 4679999999999999999999999999999999998765 458
Q ss_pred EEEEEcCccCC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHH-----HHHHHHHHcCCcccc
Q 000628 924 GDIKISGYPKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKM-----FVDEVMELVELKSLN 995 (1383)
Q Consensus 924 G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~-----~v~~~l~~l~L~~~~ 995 (1383)
|+|.+||+|+. ...+++++|+|.|+|.+|. -||+|||.|+.. +.+.++... .+.+-+. ++.+-.
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~--~~p~gY 594 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFIT--NFPDGY 594 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHH--hCcccc
Confidence 99999999874 4567899999999999976 599999999753 233333221 1222222 345667
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhc
Q 000628 996 DSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1075 (1383)
Q Consensus 996 ~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 1075 (1383)
|+.+|..|. .||||||||++|||||++||+||||||+||.||++++..|+++|.++.+ ++|||+++|+++ ..+.+|
T Consensus 595 ~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad 670 (716)
T KOG0058|consen 595 NTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHAD 670 (716)
T ss_pred ccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--Hhhhcc
Confidence 889987654 6999999999999999999999999999999999999999999998874 699999999965 788999
Q ss_pred eEEEEecCcEEEEecCC
Q 000628 1076 ELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1076 ~~~~l~~gG~~~~~g~~ 1092 (1383)
+|+++++ |++++.|..
T Consensus 671 ~Ivvi~~-G~V~E~G~h 686 (716)
T KOG0058|consen 671 QIVVIDK-GRVVEMGTH 686 (716)
T ss_pred EEEEEcC-CeEEecccH
Confidence 9999985 899999964
No 101
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-37 Score=341.12 Aligned_cols=200 Identities=27% Similarity=0.424 Sum_probs=172.0
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1383)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... .++.++|++|++.+++.+||+|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 469999999999999999999999999999999999765 347999999987642 3567999999999889999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000628 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1383)
Q Consensus 960 ~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1383)
|+.+....+. ...+...+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988654331 223344566889999999987777663 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEec-CcEEEEecCC
Q 000628 1040 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKR-GGRVIYAGPL 1092 (1383)
Q Consensus 1040 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~-gG~~~~~g~~ 1092 (1383)
.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|.+ +|++++.+++
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999864 4899999999975 56778999999985 5899988765
No 102
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.2e-37 Score=341.99 Aligned_cols=208 Identities=25% Similarity=0.337 Sum_probs=173.3
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 466777765421 12359999999999999999999999999999999999765 34799999998753
Q ss_pred h------hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000628 935 Q------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 935 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1383)
. ...++.++|++|++.+++.+||.||+.+....+. ...++.++.++++++.++|.+..++.+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 2 1245679999999999999999999988754321 223344566899999999988777663 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
|||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999999877999999999975 46678999999975 54
No 103
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.3e-37 Score=355.58 Aligned_cols=206 Identities=29% Similarity=0.442 Sum_probs=177.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--CcceEEEecCCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 261 (1383)
..+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999997 999999999875432 2467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.|.++..+... .+ ....++.+++.+||++..++.+++
T Consensus 97 v~e~l~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~---- 138 (306)
T PRK13537 97 VRENLLVFGRYFGLSA--------------------AA--------------ARALVPPLLEFAKLENKADAKVGE---- 138 (306)
T ss_pred HHHHHHHHHHHcCCCH--------------------HH--------------HHHHHHHHHHHcCCchHhcCchhh----
Confidence 9999998655432110 00 011356688899999999998876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|++++.|+ ..++.++||+|++|++|+
T Consensus 139 -LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~till~sH~-l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 139 -LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-RGKTILLTTHF-MEEAERLCDRLCVIEEGR 215 (306)
T ss_pred -CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEECCC-HHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999975 36777777655 558999999999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
+++.|+++++.+
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998864
No 104
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.2e-37 Score=313.44 Aligned_cols=196 Identities=27% Similarity=0.359 Sum_probs=171.6
Q ss_pred ceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-hcccceEEEEccCCCCCCCCCHHHHHHH
Q 000628 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYESLLY 963 (1383)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f 963 (1383)
..+++|++||++||+||||||||||||+|+|...+ .+|+|+|||.+... ....|-++.++|+..+|.++||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 45678999999999999999999999999998764 48999999998654 3355778999999999999999999988
Q ss_pred HHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHH
Q 000628 964 SAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1043 (1383)
Q Consensus 964 ~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1043 (1383)
+..-.+ .. ..+.+++++.++..+||..+.++.. ..|||||||||++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~P~L--kL-~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KL-NAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--cc-CHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 643211 12 2344567999999999999999884 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1044 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1044 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
++..++.+++++ +.|++++||+|+ |.....|+++++++ |+|.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 999999999754 899999999997 89999999999985 899999986
No 105
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.7e-37 Score=361.20 Aligned_cols=217 Identities=26% Similarity=0.402 Sum_probs=184.3
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|++..+. .+.+|+|+|++|++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 56777765442 34699999999999999999999999999999999997653 4799999998764
Q ss_pred h-hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000628 935 Q-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1383)
Q Consensus 935 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1383)
. ...++.+|||+|++.++|.+||+||+.|....+.. ...+.++.+++++++++.++|.+..++. +..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----PAQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 3 22346799999999999999999999987653211 1233455567789999999998888776 457999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999866 899999999986 67889999999985 89999998
Q ss_pred CC
Q 000628 1092 LG 1093 (1383)
Q Consensus 1092 ~~ 1093 (1383)
+.
T Consensus 221 ~~ 222 (353)
T PRK10851 221 PD 222 (353)
T ss_pred HH
Confidence 63
No 106
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-37 Score=338.21 Aligned_cols=198 Identities=27% Similarity=0.441 Sum_probs=170.0
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1383)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..++.++|++|++.+++.+||+|
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 469999999999999999999999999999999999765 348999999987643 34567999999999999999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000628 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1383)
Q Consensus 960 ~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1383)
|+.+....+. ....+..+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 90 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~ 161 (210)
T cd03269 90 QLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDP 161 (210)
T ss_pred HHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 9988654432 22334456688999999998776665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 162 ~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 162 VNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999877899999999975 56678999999975 7877654
No 107
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=5e-37 Score=360.76 Aligned_cols=204 Identities=23% Similarity=0.289 Sum_probs=178.1
Q ss_pred ccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcc----cceEEEEccCCC
Q 000628 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETF----ARVSGYCEQNDI 950 (1383)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~----~~~~gyv~Q~~~ 950 (1383)
+.+.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ..+ ++.+|||+|++.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 34569999999999999999999999999999999999866 358999999987643 223 568999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000628 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1383)
Q Consensus 951 ~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1383)
++|.+||+||+.|...+. ....++..+++.++++.++|.+..++. +..|||||||||+|||||+.+|+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~-----p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRY-----PDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 234456667899999999998877776 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1031 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
||||++||+.++..+++.++++.++ |+|||++||+++ ++...+|++++|.+ |+++..|++.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 9999999999999999999999754 899999999975 57788999999974 8999999754
No 108
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.5e-37 Score=355.52 Aligned_cols=214 Identities=28% Similarity=0.377 Sum_probs=181.3
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+||||++++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 467778776542 34699999999999999999999999999999999997653 479999999875
Q ss_pred Ch--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000628 934 NQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1383)
Q Consensus 934 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1383)
.. ...++.+||++|++.+++.+||+||+.+.+.... ...++..+.++++++.++|.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 2345679999999999999999999987554321 223344456788999999988777764 4799999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
|||++||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 57778999999985 89999987
Q ss_pred C
Q 000628 1092 L 1092 (1383)
Q Consensus 1092 ~ 1092 (1383)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 109
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-37 Score=340.75 Aligned_cols=201 Identities=29% Similarity=0.403 Sum_probs=172.4
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
+.+|+|||+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTG 90 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecCcChHHHhhcEEEecCCccccccCcH
Confidence 4699999999999999999999999999999999997653 47999999976532 2345679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
+||+.+....+. ...++.++.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 91 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~la~al~~~p~llllDEPt~~L 162 (220)
T cd03265 91 WENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGL 162 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCC
Confidence 999988654431 223344556899999999988777764 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1038 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 163 DPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999876 899999999976 56778999999975 889888764
No 110
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7e-37 Score=362.00 Aligned_cols=215 Identities=22% Similarity=0.339 Sum_probs=185.9
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478888876542 24699999999999999999999999999999999997663 489999999876
Q ss_pred Ch-hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000628 934 NQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1383)
Q Consensus 934 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1383)
.. ...+|.+|||+|++.++|.+||+||+.|+...+ ..+..+.+++++++++.++|.+..++. +..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----p~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRK-----PHQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 43 223577999999999999999999999976433 233445566789999999999888877 458999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
|||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|.+ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 999999999986 67889999999985 89999998
Q ss_pred CC
Q 000628 1092 LG 1093 (1383)
Q Consensus 1092 ~~ 1093 (1383)
+.
T Consensus 229 ~~ 230 (375)
T PRK09452 229 PR 230 (375)
T ss_pred HH
Confidence 63
No 111
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=6.2e-37 Score=362.42 Aligned_cols=206 Identities=25% Similarity=0.361 Sum_probs=178.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 262 (1383)
.++|+|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999987 9999999999875443 4779999999999999999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.|+.+.++... . +....++++++.+||++..++.+.+
T Consensus 104 ~eNi~~~l~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~p~~----- 144 (375)
T PRK09452 104 FENVAFGLRMQKTPA----------A------------------------EITPRVMEALRMVQLEEFAQRKPHQ----- 144 (375)
T ss_pred HHHHHHHHhhcCCCH----------H------------------------HHHHHHHHHHHHcCCchhhhCChhh-----
Confidence 999999754322110 0 0112356788999999988888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+|||||+.+|++|+||||+++||..++.++.+.|+++.+..+.|+|++.| ...++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTH-d~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTH-DQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999998766777776655 45689999999999999999
Q ss_pred EEecChhHHH
Q 000628 423 VYQGPRDNVL 432 (1383)
Q Consensus 423 v~~G~~~~~~ 432 (1383)
+..|+++++.
T Consensus 224 ~~~g~~~~i~ 233 (375)
T PRK09452 224 EQDGTPREIY 233 (375)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 112
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.2e-37 Score=361.90 Aligned_cols=206 Identities=22% Similarity=0.360 Sum_probs=178.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCce--eEEEECCeeCCCCCC-cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRAS--GKITYCGHELNEFVP-QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~l 260 (1383)
..+|+|+|+++++|++++|+|||||||||||++|+|+++|+ + |+|.++|.++....+ ++.++||+|++.++|++
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35999999999999999999999999999999999999987 7 999999998865443 46799999999999999
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||+||+.|+.+..+... . +....++.+++.+||++..|+.+++
T Consensus 95 tv~enl~~~l~~~~~~~--------------------~--------------~~~~~v~~~l~~~gL~~~~~~~~~~--- 137 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMPK--------------------A--------------DIAERVADALKLVGLGDAAAHLPAQ--- 137 (362)
T ss_pred cHHHHHHHHHHHcCCCH--------------------H--------------HHHHHHHHHHHhcCCCchhhCChhh---
Confidence 99999999754332110 0 0112367789999999999988876
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhC-CceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHIL-DVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~-~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +.|+|++.| ...++..++|+|++|++
T Consensus 138 --LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTH-d~~ea~~l~dri~vl~~ 214 (362)
T TIGR03258 138 --LSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTH-DQDDALTLADKAGIMKD 214 (362)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeC-CHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998765 567666655 55689999999999999
Q ss_pred CeEEEecChhHHH
Q 000628 420 GQIVYQGPRDNVL 432 (1383)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1383)
|+++..|+++++.
T Consensus 215 G~i~~~g~~~~~~ 227 (362)
T TIGR03258 215 GRLAAHGEPQALY 227 (362)
T ss_pred CEEEEEcCHHHHH
Confidence 9999999999884
No 113
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1e-36 Score=337.13 Aligned_cols=199 Identities=27% Similarity=0.396 Sum_probs=169.6
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh-cccceEEEEccCCCCCCCCCHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVY 958 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~ 958 (1383)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++..|++
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 469999999999999999999999999999999999765 3479999999875431 2245799999999988899999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000628 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1383)
Q Consensus 959 E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1383)
||+.+....+ ....++.++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 ~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~laral~~~p~llllDEPt~~LD 162 (213)
T cd03301 91 DNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLD 162 (213)
T ss_pred HHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9998865432 1223444566889999999987777663 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1039 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
+.++..+++.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 163 AKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999864 899999999975 56778999999975 7888765
No 114
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.1e-37 Score=360.96 Aligned_cols=206 Identities=29% Similarity=0.439 Sum_probs=173.0
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCCCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~lT 261 (1383)
++++|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||++.++.. ++++++||+|+|.+|+ -|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 6899999999999999999999999999999999999987 999999999987765 4689999999999987 49
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
+||||.++.. +.+.++..+++...+ +.+.+.-++..||.+|+ .++
T Consensus 411 ireNi~l~~~-------------------------~~s~e~i~~al~~a~---------l~~~v~~p~GLdt~ige-~G~ 455 (559)
T COG4988 411 IRENILLARP-------------------------DASDEEIIAALDQAG---------LLEFVPKPDGLDTVIGE-GGA 455 (559)
T ss_pred HHHHhhccCC-------------------------cCCHHHHHHHHHHhc---------HHHhhcCCCcccchhcc-CCC
Confidence 9999998632 111111112211111 12222226688999996 678
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
||||||+|||++|||++.+++++++||||++||.+++..|.+.|.++++ ++|+++..|++ +...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~itHrl--~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLVITHRL--EDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEEEEcCh--HHHhcCCEEEEecCCc
Confidence 8999999999999999999999999999999999999999999999987 57888887765 5778899999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999999864
No 115
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=358.75 Aligned_cols=217 Identities=25% Similarity=0.348 Sum_probs=182.1
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++. +.+++.+|+|+||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~---------~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQ---------GGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCC---------CCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 467787766531 0113569999999999999999999999999999999999765 34799999998764
Q ss_pred h------hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000628 935 Q------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 935 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1383)
. ...++.+||++|++.+++.+||+||+.+....+ .....+.++.++++++.++|.+..++. +..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRY-----PAQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 2 123567999999999999999999999875443 223344556789999999998877776 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1087 (1383)
|||||||+|||+|+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|.+ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999976 56778999999975 8999
Q ss_pred EecCC
Q 000628 1088 YAGPL 1092 (1383)
Q Consensus 1088 ~~g~~ 1092 (1383)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99875
No 116
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.1e-36 Score=338.32 Aligned_cols=198 Identities=30% Similarity=0.460 Sum_probs=170.5
Q ss_pred eEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCHH
Q 000628 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTVY 958 (1383)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1383)
.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+||+
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 96 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAR 96 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHH
Confidence 69999999999999999999999999999999999765 347999999987642 23456799999999999999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000628 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1383)
Q Consensus 959 E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1383)
||+.+....+ .....+..+.++++++.+++.+..++. ++.||||||||++|||+|+.+|++|+|||||+|||
T Consensus 97 e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD 168 (218)
T cd03266 97 ENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRR-----VGGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLD 168 (218)
T ss_pred HHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhh-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCC
Confidence 9998765433 123344556789999999998877766 45799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1039 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+ |++++.|
T Consensus 169 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 169 VMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 99999999999999877999999999975 56778999999975 7877653
No 117
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.4e-36 Score=341.61 Aligned_cols=204 Identities=29% Similarity=0.403 Sum_probs=171.9
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh---c-ccceEEEEccCCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE---T-FARVSGYCEQNDIHSPYV 955 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~~l 955 (1383)
+.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 469999999999999999999999999999999999765 3479999999875431 1 235699999999999999
Q ss_pred CHHHHHHHHHHhhcCCC-------CcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000628 956 TVYESLLYSAWLRLSSD-------VDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1383)
Q Consensus 956 Tv~E~l~f~~~l~~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~il 1028 (1383)
||+||+.+......... ....+..+.++++++.+++.+..++. ++.||||||||++||++|+.+|++|
T Consensus 91 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 165 (236)
T cd03219 91 TVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----AGELSYGQQRRLEIARALATDPKLL 165 (236)
T ss_pred CHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999988654321110 01233455688999999998776665 4579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1029 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 166 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (236)
T cd03219 166 LLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-GRVIAEGTP 227 (236)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEeecCH
Confidence 999999999999999999999999878999999999986 56678999999985 889888874
No 118
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=359.18 Aligned_cols=215 Identities=24% Similarity=0.364 Sum_probs=185.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478888876442 24699999999999999999999999999999999998663 479999999876
Q ss_pred Ch-hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000628 934 NQ-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1383)
Q Consensus 934 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1383)
.. ...+|.+|||+|++.++|++||.||+.|....+ .....+.+++++++++.++|.+..++. +.+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 43 234678999999999999999999999976533 234455667789999999999888776 457999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
|||+|||||+.+|++|||||||++||+.++..+.+.|+++.+ .|.|+|++||+++ ++...+|++++|.+ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999999865 4899999999986 67889999999985 89999998
Q ss_pred CC
Q 000628 1092 LG 1093 (1383)
Q Consensus 1092 ~~ 1093 (1383)
+.
T Consensus 234 ~~ 235 (377)
T PRK11607 234 PE 235 (377)
T ss_pred HH
Confidence 64
No 119
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-36 Score=361.00 Aligned_cols=214 Identities=27% Similarity=0.363 Sum_probs=182.8
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 4 l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i~ 68 (369)
T PRK11000 4 VTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRMN 68 (369)
T ss_pred EEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 66777776542 34699999999999999999999999999999999997653 4799999998764
Q ss_pred h-hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000628 935 Q-ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1383)
Q Consensus 935 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1383)
. ...++.+||++|++.+++.+||+||+.|....+. ....+.+++++++++.++|.+..++.+ ..|||||||
T Consensus 69 ~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~Q 140 (369)
T PRK11000 69 DVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQRQ 140 (369)
T ss_pred CCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHH
Confidence 3 1234679999999999999999999998765431 233455567899999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|.+ |+++..|++
T Consensus 141 RvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~~ 218 (369)
T PRK11000 141 RVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGKP 218 (369)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999999998765 899999999976 67788999999985 899999986
Q ss_pred C
Q 000628 1093 G 1093 (1383)
Q Consensus 1093 ~ 1093 (1383)
.
T Consensus 219 ~ 219 (369)
T PRK11000 219 L 219 (369)
T ss_pred H
Confidence 4
No 120
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4e-37 Score=388.61 Aligned_cols=214 Identities=25% Similarity=0.394 Sum_probs=185.5
Q ss_pred CCCcccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCC
Q 000628 178 PSKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHD 254 (1383)
Q Consensus 178 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~ 254 (1383)
++.++..+||+|+|+++++|+.+||||||||||||.+.+|...|+|+ +|.|.+||+++++.+. |+.+|.|+|+|
T Consensus 997 YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQEP 1073 (1228)
T KOG0055|consen 997 YPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQEP 1073 (1228)
T ss_pred CCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccCc
Confidence 44567788999999999999999999999999999999999999998 9999999999998875 57899999999
Q ss_pred CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccccccc
Q 000628 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTM 334 (1383)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 334 (1383)
.+|. .|+||||.|+.+. -+.++.++|+..++.+.. +.+|++++||.
T Consensus 1074 ~LF~-~TIrENI~YG~~~-------------------------vs~~eIi~Aak~ANaH~F--------I~sLP~GyDT~ 1119 (1228)
T KOG0055|consen 1074 VLFN-GTIRENIAYGSEE-------------------------VSEEEIIEAAKLANAHNF--------ISSLPQGYDTR 1119 (1228)
T ss_pred hhhc-ccHHHHHhccCCC-------------------------CCHHHHHHHHHHhhhHHH--------HhcCcCcccCc
Confidence 9996 5999999997210 123445566665554322 45799999999
Q ss_pred ccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
||+ .+..||||||||++||||+++||+||||||.||+||+++.+-+.+.|++... ++|.|+.-|.. .+.+.+|.|
T Consensus 1120 vGe-rG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~--gRT~IvIAHRL--STIqnaD~I 1194 (1228)
T KOG0055|consen 1120 VGE-RGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAME--GRTTIVIAHRL--STIQNADVI 1194 (1228)
T ss_pred cCc-ccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhc--CCcEEEEecch--hhhhcCCEE
Confidence 997 3455999999999999999999999999999999999999999999999865 67777776654 689999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000628 415 ILLSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~~ 433 (1383)
+|+++|+|+++|++++++.
T Consensus 1195 ~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1195 AVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred EEEECCEEEecccHHHHHh
Confidence 9999999999999999985
No 121
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-36 Score=340.76 Aligned_cols=216 Identities=28% Similarity=0.390 Sum_probs=178.6
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56777776542 2469999999999999999999999999999999999765 34799999998754
Q ss_pred hh-cccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCC-CCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000628 935 QE-TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSS-DVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1383)
Q Consensus 935 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1383)
.. ..++.++|++|++.+++.+||+||+.+....+... .....+..+.++++++.++|.+..++. +..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----PAQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCCHHHH
Confidence 31 22457999999999989999999998865432110 012233445678999999998777766 357999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
|||+||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999999865 899999999975 56778999999975 88998887
Q ss_pred C
Q 000628 1092 L 1092 (1383)
Q Consensus 1092 ~ 1092 (1383)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 5
No 122
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.5e-36 Score=340.35 Aligned_cols=201 Identities=27% Similarity=0.374 Sum_probs=171.8
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hc-ccceEEEEccCCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET-FARVSGYCEQNDIHSPYV 955 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~-~~~~~gyv~Q~~~~~~~l 955 (1383)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... .. .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKL 90 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccCCHhHHHhccEEEecCCccccccC
Confidence 469999999999999999999999999999999999765 347999999987532 11 235699999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCC
Q 000628 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1035 (1383)
Q Consensus 956 Tv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1035 (1383)
||+||+.+....+. ....+..+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+
T Consensus 91 tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~ 162 (232)
T cd03218 91 TVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGERRRVEIARALATNPKFLLLDEPFA 162 (232)
T ss_pred cHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcc
Confidence 99999987643321 22334455678999999998777665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1036 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1036 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|||+.+++.+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 163 ~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 217 (232)
T cd03218 163 GVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGTP 217 (232)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeCH
Confidence 99999999999999999877999999999986 67888999999975 889888875
No 123
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=339.37 Aligned_cols=207 Identities=26% Similarity=0.369 Sum_probs=173.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 257 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 46999999999999999999999999999999999999987 999999999876532 245799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+||+||+.++.+...... .. + ....++.+++.+||++..++.+++
T Consensus 90 ~~~tv~~~l~~~~~~~~~~~---------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 136 (235)
T cd03261 90 DSLTVFENVAFPLREHTRLS---------EE----------E--------------IREIVLEKLEAVGLRGAEDLYPAE 136 (235)
T ss_pred CCCcHHHHHHHHHhhccCCC---------HH----------H--------------HHHHHHHHHHHcCCchhhcCChhh
Confidence 99999999988633110000 00 0 011345678899998878888876
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.++||+|++|
T Consensus 137 -----LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~-~~~~~~~d~v~~l 210 (235)
T cd03261 137 -----LSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDL-DTAFAIADRIAVL 210 (235)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCH-HHHHHhcCEEEEE
Confidence 9999999999999999999999999999999999999999999998764467777776554 4788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000628 418 SEGQIVYQGPRDNVL 432 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1383)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (235)
T cd03261 211 YDGKIVAEGTPEELR 225 (235)
T ss_pred ECCeEEEecCHHHHc
Confidence 999999999988763
No 124
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-36 Score=384.27 Aligned_cols=207 Identities=26% Similarity=0.356 Sum_probs=173.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
+++|+|+|++++||+.++|+||||||||||+++|+|++ |. +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-G 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-c
Confidence 35899999999999999999999999999999999999 76 8999999999987654 578999999999986 5
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++|||.++.. +.+.++..+++..++. +.. .-.|+++.||.||+. +
T Consensus 438 TI~eNI~~g~~-------------------------~~~~eei~~al~~a~l------~~~--i~~lp~G~dT~vge~-G 483 (588)
T PRK11174 438 TLRDNVLLGNP-------------------------DASDEQLQQALENAWV------SEF--LPLLPQGLDTPIGDQ-A 483 (588)
T ss_pred CHHHHhhcCCC-------------------------CCCHHHHHHHHHHhCH------HHH--HHhcccccccccccC-C
Confidence 99999988521 1112233333332221 111 224788899999974 5
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
..||||||||++||||++++|+||+||||||+||+.++..|.+.|+++.+ ++|+|+..|++ ++.+.||+|++|++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~--~~TvIiItHrl--~~i~~aD~Iivl~~G 559 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR--RQTTLMVTHQL--EDLAQWDQIWVMQDG 559 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC--CCEEEEEecCh--HHHHhCCEEEEEeCC
Confidence 66999999999999999999999999999999999999999999998753 68888888876 577889999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
+++++|+++++++
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999999874
No 125
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.5e-36 Score=360.79 Aligned_cols=217 Identities=29% Similarity=0.368 Sum_probs=182.7
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.+ +++.+|+|+||++++||+++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 4 L~~~nls~~y-------------~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~ 68 (402)
T PRK09536 4 IDVSDLSVEF-------------GDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVE 68 (402)
T ss_pred EEEeeEEEEE-------------CCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcC
Confidence 5677776544 24579999999999999999999999999999999999765 34799999998754
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
. ..+++.+|||+|++.+++.+||+|++.+....+.. .....+..++.++++++.+++.+..++. ++.||||
T Consensus 69 ~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----~~~LSgG 143 (402)
T PRK09536 69 ALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----VTSLSGG 143 (402)
T ss_pred cCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHH
Confidence 3 34567899999999998999999999885422110 0111233456789999999999888876 4579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
||||+.|||+|+++|++|||||||+|||+.++..++++|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 144 erQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~G 221 (402)
T PRK09536 144 ERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAAG 221 (402)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 999999999999999999999999999999999999999999877999999999986 57788999999985 8999999
Q ss_pred CCC
Q 000628 1091 PLG 1093 (1383)
Q Consensus 1091 ~~~ 1093 (1383)
++.
T Consensus 222 ~~~ 224 (402)
T PRK09536 222 PPA 224 (402)
T ss_pred CHH
Confidence 864
No 126
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.3e-36 Score=337.63 Aligned_cols=193 Identities=31% Similarity=0.437 Sum_probs=164.5
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh------c-ccceEEEEccCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE------T-FARVSGYCEQNDIHS 952 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~------~-~~~~~gyv~Q~~~~~ 952 (1383)
+.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.... . .++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 469999999999999999999999999999999999765 3479999999875421 1 245799999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000628 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1383)
Q Consensus 953 ~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1383)
+.+||+||+.+....+. ......++.++++++.++|.+..++. +..||||||||++||++|+.+|++|||||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHY-----PSELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcC-----hhhcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999998764431 22233455688999999998777665 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1033 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
||+|||+.++..+.+.|+++++ .|+|||++||+++ ++ +.+|++++|.+ |+
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRD-GK 217 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeC-Cc
Confidence 9999999999999999999987 5899999999975 34 48999999985 54
No 127
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.3e-36 Score=352.90 Aligned_cols=213 Identities=23% Similarity=0.379 Sum_probs=182.3
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|++..+ +++.+|+|+||++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~-------------~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLY-------------GTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEE-------------CCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 5667776544 23569999999999999999999999999999999999765 35899999998764
Q ss_pred h--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000628 935 Q--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1383)
Q Consensus 935 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1383)
. ...++.+||++|++.+++.+||.||+.+.+.++. ...++..+.++++++.++|.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998775542 223444556899999999998887774 57999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
||++||+||+.+|++|||||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|.+ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999864 799999999986 67788999999985 899999986
Q ss_pred C
Q 000628 1093 G 1093 (1383)
Q Consensus 1093 ~ 1093 (1383)
.
T Consensus 217 ~ 217 (301)
T TIGR03522 217 D 217 (301)
T ss_pred H
Confidence 3
No 128
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.6e-36 Score=352.51 Aligned_cols=206 Identities=27% Similarity=0.422 Sum_probs=176.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--CcceEEEecCCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 261 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999987 999999999875421 2457999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.|.++..+... . +....++.+++.+||++..++.+++
T Consensus 83 v~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 124 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------D------------------------EAEERAEELLELFELGEAADRPVGT---- 124 (302)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCChhHhCCchhh----
Confidence 9999998654432110 0 0011356789999999888988877
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++++. +.|++++.|+ ..++.++||+|++|++|+
T Consensus 125 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvi~~sH~-~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 125 -YSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEE-GVTILLTTHY-MEEADKLCDRIAIIDHGR 201 (302)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-CCEEEEECCC-HHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999998764 6777776655 558889999999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988764
No 129
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.7e-36 Score=338.78 Aligned_cols=202 Identities=26% Similarity=0.320 Sum_probs=169.7
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCC-----CCceEEEEEEEcCccCCh-----hcccceEEEEccCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQND 949 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~-----~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 949 (1383)
+.+|+|+|++|++||+++|+||||||||||+++|+|.. . +.+|+|.++|.+... ...++.++|++|++
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 46999999999999999999999999999999999976 4 457999999987532 23456799999999
Q ss_pred CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCce
Q 000628 950 IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1383)
Q Consensus 950 ~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~ill 1029 (1383)
.++ .+||+||+.+....+. .....+.++.++++++.+++.+..+.... +..||||||||++||++|+.+|++|+
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~lll 164 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEVLL 164 (227)
T ss_pred hhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 887 7999999988654331 11122244568899999999876555421 25799999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|||||+|||+.++..+++.|++++++ +|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 165 lDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 224 (227)
T cd03260 165 LDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GRLVEFGPT 224 (227)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEecCc
Confidence 99999999999999999999999876 99999999976 56678999999985 899988875
No 130
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=346.96 Aligned_cols=205 Identities=23% Similarity=0.303 Sum_probs=173.6
Q ss_pred ccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hc----ccceEEEEccC
Q 000628 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET----FARVSGYCEQN 948 (1383)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q~ 948 (1383)
.++.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... .. .++.++|++|+
T Consensus 33 ~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~ 110 (269)
T cd03294 33 KTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQS 110 (269)
T ss_pred hcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecC
Confidence 34566799999999999999999999999999999999997653 47999999987532 11 13579999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000628 949 DIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1383)
Q Consensus 949 ~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~il 1028 (1383)
+.+++.+||+||+.+..... ........+.++++++.++|.+..++.+ ..||||||||++||++|+.+|+||
T Consensus 111 ~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~il 182 (269)
T cd03294 111 FALLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDIL 182 (269)
T ss_pred cccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999998865432 1223344556889999999988777764 479999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1029 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 183 lLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 183 LMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999754 899999999975 56778999999975 889988875
No 131
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.6e-36 Score=334.30 Aligned_cols=195 Identities=30% Similarity=0.427 Sum_probs=167.6
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-hcccceEEEEccCCCCCCCCCHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVY 958 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1383)
+.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 469999999999999999999999999999999999765 348999999987542 23456799999999999999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000628 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1383)
Q Consensus 959 E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1383)
||+.+....+. . .++.++++++.+++.+..++.+ ..|||||||||+||++|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD 158 (208)
T cd03268 91 ENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTNGLD 158 (208)
T ss_pred HHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCC
Confidence 99988654321 1 1345788999999988777663 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1039 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 159 PDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999877999999999975 46678999999985 7887654
No 132
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.2e-37 Score=323.43 Aligned_cols=206 Identities=28% Similarity=0.411 Sum_probs=175.0
Q ss_pred ccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccCCCC
Q 000628 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDIH 951 (1383)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~ 951 (1383)
.|++.++|++||+++++||+++|+|+|||||||||++|+|..+. .+|+|.++|.++.. +..++.++||||....
T Consensus 12 ~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~i 89 (237)
T COG0410 12 GYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDITGLPPHERARLGIAYVPEGRRI 89 (237)
T ss_pred cccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecCCCCHHHHHhCCeEeCcccccc
Confidence 34567899999999999999999999999999999999997653 47999999998754 3456779999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000628 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVE-LKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1383)
Q Consensus 952 ~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1383)
||.+||+|||..++..+.. ++.....++++.+.+- |.+.+++..| .|||||||.|+|||||+.+|++|+|
T Consensus 90 F~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLL 160 (237)
T COG0410 90 FPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRPKLLLL 160 (237)
T ss_pred hhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCCCEEEe
Confidence 9999999999988654422 1122222778888875 6677777755 6999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1031 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
||||.||-|.-.++|.+.|+++.++ |.||+++-+... ...+.+|+.++|.+ |++++.|+..+
T Consensus 161 DEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~~G~~~e 223 (237)
T COG0410 161 DEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVLSGTAAE 223 (237)
T ss_pred cCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEEecCHHH
Confidence 9999999999999999999999966 779999988765 46678999999985 89999998643
No 133
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3.5e-36 Score=335.85 Aligned_cols=221 Identities=36% Similarity=0.616 Sum_probs=179.5
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC-CceEEEEEEEcCccC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT-GGYIEGDIKISGYPK 933 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~-~g~~~G~i~i~g~~~ 933 (1383)
+.|+|+++..+.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|... +++.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 3567777655311 013579999999999999999999999999999999999754 123579999999877
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 000628 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDE-VMELVELKSLNDSMVGLPGVSGLSTEQR 1012 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~~g~~~~~~LSgGqr 1012 (1383)
.....++.++|++|++.+++.+||+||+.|..................+++ .++.+++.+..++. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 554567789999999999999999999998765432222122222334555 89999988776665 457999999
Q ss_pred HHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1013 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1013 qRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|.+ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999999877999999999974368889999999985 8888765
No 134
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=339.11 Aligned_cols=200 Identities=27% Similarity=0.341 Sum_probs=171.8
Q ss_pred eEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh------cccceEEEEccCCCCCCC
Q 000628 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE------TFARVSGYCEQNDIHSPY 954 (1383)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~~~ 954 (1383)
.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 69999999999999999999999999999999999765 3479999999875421 235679999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000628 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1383)
Q Consensus 955 lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1383)
+|++||+.+....+. .......+.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||
T Consensus 97 ~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 97 RTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 999999988654331 22334455688999999998777765 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 225 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVVEEGTV 225 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999765 899999999975 56678999999975 899988874
No 135
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=355.84 Aligned_cols=210 Identities=28% Similarity=0.431 Sum_probs=178.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 262 (1383)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.++|++||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 45999999999999999999999999999999999999987 9999999998865433 3679999999999999999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.|+.+....... .... +....++.+++.+||++..|+.+.+
T Consensus 92 ~eni~~~~~~~~~~~~------~~~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~~----- 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER------PNAA------------------------AIKAKVTQLLEMVQLAHLADRYPAQ----- 136 (353)
T ss_pred HHHHHhhhhhcccccC------CCHH------------------------HHHHHHHHHHHHcCCchhhhCChhh-----
Confidence 9999997543110000 0000 0112356789999999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+.|++++. |...++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vT-Hd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVT-HDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876567766665 455689999999999999999
Q ss_pred EEecChhHHH
Q 000628 423 VYQGPRDNVL 432 (1383)
Q Consensus 423 v~~G~~~~~~ 432 (1383)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 136
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=319.21 Aligned_cols=208 Identities=25% Similarity=0.351 Sum_probs=175.4
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHH 257 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~ 257 (1383)
...++|+|||+++++||+++|+||||+||||||++|+|..++. +|+|.++|++++...+ ++.++||||....|
T Consensus 14 G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF 90 (237)
T COG0410 14 GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIF 90 (237)
T ss_pred cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccch
Confidence 3468999999999999999999999999999999999999886 8999999999988765 36799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHc-CCccccccccc
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKIL-GLDICADTMVG 336 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg 336 (1383)
+.|||+|||..++..+.... . . ....|.+.+.| .|.+..+..-|
T Consensus 91 ~~LTVeENL~~g~~~~~~~~------------~-----~------------------~~~~e~v~~lFP~Lker~~~~aG 135 (237)
T COG0410 91 PRLTVEENLLLGAYARRDKE------------A-----Q------------------ERDLEEVYELFPRLKERRNQRAG 135 (237)
T ss_pred hhCcHHHHHhhhhhcccccc------------c-----c------------------cccHHHHHHHChhHHHHhcCccc
Confidence 99999999998754321100 0 0 00023344444 25555677777
Q ss_pred CcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEE
Q 000628 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1383)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~l 416 (1383)
+ |||||||-++|||||+++|++|+|||||.||-|.-..+|.+.++++.+..+ ..|+.+.|......+++|+.++
T Consensus 136 ~-----LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g-~tIlLVEQn~~~Al~iaDr~yv 209 (237)
T COG0410 136 T-----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGG-MTILLVEQNARFALEIADRGYV 209 (237)
T ss_pred C-----CChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCC-cEEEEEeccHHHHHHhhCEEEE
Confidence 7 999999999999999999999999999999999999999999999987555 4556668999999999999999
Q ss_pred EcCCeEEEecChhHHHH
Q 000628 417 LSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 417 L~~G~iv~~G~~~~~~~ 433 (1383)
|.+|+|++.|+.+++..
T Consensus 210 le~Griv~~G~~~eL~~ 226 (237)
T COG0410 210 LENGRIVLSGTAAELLA 226 (237)
T ss_pred EeCCEEEEecCHHHHhc
Confidence 99999999999999863
No 137
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.7e-37 Score=322.29 Aligned_cols=205 Identities=25% Similarity=0.401 Sum_probs=187.1
Q ss_pred ccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCC
Q 000628 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYV 955 (1383)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~l 955 (1383)
+.+++.+++|+||.++||+++|++|+|||||||++++|.|... +.+|.|.++|.+.+.. .+.+|||+|.+..++|.+
T Consensus 11 ~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~ 87 (300)
T COG4152 11 SFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERGLYPKM 87 (300)
T ss_pred ccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhccCccC
Confidence 4567889999999999999999999999999999999999876 3589999999988654 456799999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCC
Q 000628 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1035 (1383)
Q Consensus 956 Tv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1035 (1383)
||.|.|.|.|.+. .+++++.++.++.+|+.+++......+ ++.||.|++|++.+-.+++++|++++||||+|
T Consensus 88 tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPFS 159 (300)
T COG4152 88 TVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPFS 159 (300)
T ss_pred cHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCcc
Confidence 9999999999886 566788888899999999998887776 56899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1036 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1036 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
||||.+.+.+.+.+.++++.|.|||+++|++. .+-++||++++|++ |+.|..|++.
T Consensus 160 GLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~ 215 (300)
T COG4152 160 GLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVE 215 (300)
T ss_pred CCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHH
Confidence 99999999999999999999999999999986 68889999999985 7888889864
No 138
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.4e-37 Score=316.39 Aligned_cols=210 Identities=22% Similarity=0.367 Sum_probs=181.6
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHH 257 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~ 257 (1383)
+++++++|||+.+++||+++|+|||||||||.+.++.|+..|+ +|+|.+||.+++.... +..+||+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 4567999999999999999999999999999999999999998 9999999999987754 34699999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
-.+||+|||.-..+.+.... . ..+.+...+.+|+.++|.|+++.+-..
T Consensus 92 r~LtV~dNi~~vlE~~~~d~---------------------~-----------~~~~~~~l~~LL~ef~i~hlr~~~a~s 139 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKDL---------------------K-----------KAERKEELDALLEEFHITHLRDSKAYS 139 (243)
T ss_pred hcCcHHHHHHHHHhhhhcch---------------------h-----------HHHHHHHHHHHHHHhchHHHhcCcccc
Confidence 99999999986544321100 0 001123467899999999999988766
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
||||||+|+.|||||+.+|+.++||||++|+||.+..+|.+.++.+++ .|..++|+-| .-.|+..+|||.+++
T Consensus 140 -----LSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~-rgiGvLITDH-NVREtL~i~dRaYIi 212 (243)
T COG1137 140 -----LSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD-RGIGVLITDH-NVRETLDICDRAYII 212 (243)
T ss_pred -----cccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh-CCceEEEccc-cHHHHHhhhheEEEE
Confidence 999999999999999999999999999999999999999999999987 4777777765 456999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000628 418 SEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1383)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999999864
No 139
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-36 Score=357.78 Aligned_cols=206 Identities=23% Similarity=0.317 Sum_probs=178.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 262 (1383)
..+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|++.+||++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999987 9999999998865433 4789999999999999999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
.||+.|+.+..+.. +. +....++.+++.+||.+..++.+.+
T Consensus 109 ~eNi~~~l~~~~~~----------~~------------------------~~~~~v~~~l~~l~L~~~~~~~~~~----- 149 (377)
T PRK11607 109 EQNIAFGLKQDKLP----------KA------------------------EIASRVNEMLGLVHMQEFAKRKPHQ----- 149 (377)
T ss_pred HHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99999975432210 00 0112356789999999888888766
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+|||||+.+|++|+|||||++||..++.++.+.|+++.+..+.|+|++.| ...++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTH-d~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTH-DQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcC-CHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999987766777777655 45589999999999999999
Q ss_pred EEecChhHHH
Q 000628 423 VYQGPRDNVL 432 (1383)
Q Consensus 423 v~~G~~~~~~ 432 (1383)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 140
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-36 Score=341.24 Aligned_cols=204 Identities=30% Similarity=0.373 Sum_probs=170.2
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1383)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 469999999999999999999999999999999999765 347999999987542 234567999999999999
Q ss_pred CCCHHHHHHHHHHhh-----cCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000628 954 YVTVYESLLYSAWLR-----LSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1383)
Q Consensus 954 ~lTv~E~l~f~~~l~-----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~il 1028 (1383)
.+||+||+.+..... ...........+.++++++.++|.+..+.. +..|||||||||+||++|+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998753210 000111123345678899999998766665 4579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1029 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCH
Confidence 999999999999999999999999764 899999999986 56678999999985 889988875
No 141
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-36 Score=347.03 Aligned_cols=218 Identities=21% Similarity=0.322 Sum_probs=179.0
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~--------~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEG--------TPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCC--------CccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 5778887765310 0012469999999999999999999999999999999999765 34899999998764
Q ss_pred h-----hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 000628 935 Q-----ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK--SLNDSMVGLPGVSG 1006 (1383)
Q Consensus 935 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~~g~~~~~~ 1006 (1383)
. ...++.+|||+|++. .+...||+||+.|..... ....++..+.++++++.+||. +..++. +..
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 234678999999974 334579999999865432 234455566789999999996 555655 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
||||||||++||+||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++ ++...||++++|.+ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999975 46678999999985 89
Q ss_pred EEEecCC
Q 000628 1086 VIYAGPL 1092 (1383)
Q Consensus 1086 ~~~~g~~ 1092 (1383)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999875
No 142
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.4e-36 Score=335.96 Aligned_cols=200 Identities=26% Similarity=0.411 Sum_probs=171.2
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
+.+|+|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 469999999999999999999999999999999999765 347999999987542 2345679999999999889999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
+||+.+....+. ....+..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999988654332 223334456889999999987777653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999875 699999999986 46678999999975 889888874
No 143
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-36 Score=334.09 Aligned_cols=192 Identities=30% Similarity=0.402 Sum_probs=163.0
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCC-CCCCCCHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDI-HSPYVTVY 958 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 958 (1383)
+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+......++.+||++|++. .+..+||+
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999765 347999999987644445567999999974 34467999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000628 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1383)
Q Consensus 959 E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1383)
||+.+..... . . ..+.++++++.++|.+..++. ++.||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D--A--GNEQAETVLKDLDLYALKERH-----PLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C--c--cHHHHHHHHHHcCCchhcCCC-----chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754322 1 1 124578999999998877776 45799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEE
Q 000628 1039 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1383)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1087 (1383)
+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999877999999999975 56678999999985 6653
No 144
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.4e-36 Score=338.29 Aligned_cols=202 Identities=24% Similarity=0.373 Sum_probs=172.4
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-----hcccceEEEEccCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIHSPY 954 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~ 954 (1383)
+.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPH 91 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCChhHHHHhhceEEEecccccCCC
Confidence 469999999999999999999999999999999999765 347999999987542 2345679999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000628 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1383)
Q Consensus 955 lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1383)
+||+||+.+...... .....+..+.+.++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||
T Consensus 92 ~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEP~ 164 (240)
T PRK09493 92 LTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSGGQQQRVAIARALAVKPKLMLFDEPT 164 (240)
T ss_pred CcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999987542111 123344456688999999998776765 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 165 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (240)
T PRK09493 165 SALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAEDGDP 220 (240)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeCCH
Confidence 999999999999999999877999999999976 56678999999975 899998875
No 145
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=335.84 Aligned_cols=217 Identities=26% Similarity=0.362 Sum_probs=177.9
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 36788887765310 011469999999999999999999999999999999999765 3589999999876
Q ss_pred Chhc------c-cceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000628 934 NQET------F-ARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1383)
Q Consensus 934 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1383)
.... . ++.++|++|++.+++.+||+||+.+....+ ....++.+++++++++.++|.+..++. +..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 4211 2 256999999999999999999998865432 122334456789999999998776665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++++ .|+|||++||+++ ....+|++++|. +|+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~--~~~~~~~~~~l~-~G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ--LAKRMSRQLEMR-DGR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhhCEEEEEE-CCE
Confidence 999999999999999999999999999999999999999999999875 5899999999975 345578999887 489
Q ss_pred EEEecCC
Q 000628 1086 VIYAGPL 1092 (1383)
Q Consensus 1086 ~~~~g~~ 1092 (1383)
+++.+++
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9988875
No 146
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.1e-36 Score=333.58 Aligned_cols=192 Identities=29% Similarity=0.380 Sum_probs=164.8
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1383)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 469999999999999999999999999999999999765 347999999987542 124567999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000628 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1383)
Q Consensus 954 ~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1383)
.+||.||+.+....+. ......++.++++++.+++.+..++. +..||||||||++||++|+.+|++|+||||
T Consensus 93 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~lllLDEP 164 (214)
T TIGR02673 93 DRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAF-----PEQLSGGEQQRVAIARAIVNSPPLLLADEP 164 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 9999999988754321 22334456788999999998766665 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
|+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~ 212 (214)
T TIGR02673 165 TGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDD 212 (214)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecC
Confidence 9999999999999999999877999999999975 56678999999975
No 147
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.3e-36 Score=339.86 Aligned_cols=214 Identities=26% Similarity=0.374 Sum_probs=178.6
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 56777776542 2469999999999999999999999999999999999765 34799999998653
Q ss_pred h-----------hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000628 935 Q-----------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG 1003 (1383)
Q Consensus 935 ~-----------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 1003 (1383)
. ...++.++|++|++.+++..||.||+.+...... ....+...+.++++++.++|.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 2245679999999999999999999987543211 122334456688999999998776665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecC
Q 000628 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1383)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1083 (1383)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 4579999999999999999999999999999999999999999999999877999999999975 56678999999985
Q ss_pred cEEEEecCC
Q 000628 1084 GRVIYAGPL 1092 (1383)
Q Consensus 1084 G~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 889988874
No 148
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-36 Score=351.51 Aligned_cols=206 Identities=26% Similarity=0.360 Sum_probs=176.4
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC------cceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~~~~~ 257 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999987 9999999998865432 35799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+||+||+.+.....+... . + ....++.+++.+||++..++.+++
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~gL~~~~~~~~~~ 140 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------A----------E--------------IKARVTELLELVGLSDKADRYPAQ 140 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------H----------H--------------HHHHHHHHHHHcCCchhhhCChhh
Confidence 99999999998644322100 0 0 011356688899999888888776
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++..+.|+|++.|+. .++.++||+|++|
T Consensus 141 -----LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~-~~i~~~~d~v~~l 214 (343)
T PRK11153 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEM-DVVKRICDRVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999999775567777776654 5788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000628 418 SEGQIVYQGPRDNVL 432 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1383)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 149
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=334.74 Aligned_cols=207 Identities=26% Similarity=0.372 Sum_probs=180.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCC----CCCCcceEEEecCCCC-CCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELN----EFVPQRTCAYISQHDL-HHG 258 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~----~~~~~~~~~yv~Q~~~-~~~ 258 (1383)
..+|+|+|+.+++|+.++|+||||||||||+++|+|.+.|. +|+|.++|.+.. ....++.+|||+|+|. .+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999997 899999999865 2234688999999973 345
Q ss_pred CCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCc
Q 000628 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1383)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1383)
.-||.|.++|+.+..+.... +...+++.+++.+||.+.++..+-+
T Consensus 94 ~~tV~~evafg~~n~g~~~~----------------------------------e~~~rv~~~l~~vgl~~~~~r~p~~- 138 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPRE----------------------------------EIEERVAEALELVGLEELLDRPPFN- 138 (235)
T ss_pred cCcHHHHHhhchhhcCCCHH----------------------------------HHHHHHHHHHHHcCchhhccCCccc-
Confidence 67999999999877654310 0123577899999999999988877
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||.+|+.+|++++|||||||||+..+.++++.++++.+..+.|+|++. |....+.+++|++++|+
T Consensus 139 ----LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~t-Hd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 139 ----LSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVT-HDLELVLEYADRVVVLD 213 (235)
T ss_pred ----cCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEe-CcHHHHHhhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999886566776665 55678999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000628 419 EGQIVYQGPRDNVLE 433 (1383)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1383)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877754
No 150
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-36 Score=356.47 Aligned_cols=206 Identities=26% Similarity=0.382 Sum_probs=177.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 262 (1383)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.+++++||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999987 9999999998865433 4679999999999999999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.|+.+..+.. .. + ....++.+++.+||++..++.+++
T Consensus 93 ~eni~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~lgL~~~~~~~~~~----- 133 (369)
T PRK11000 93 AENMSFGLKLAGAK----------KE----------E--------------INQRVNQVAEVLQLAHLLDRKPKA----- 133 (369)
T ss_pred HHHHHhHHhhcCCC----------HH----------H--------------HHHHHHHHHHHcCChhhhcCChhh-----
Confidence 99999875432210 00 0 012356788999999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|+ ..++..++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd-~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHD-QVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCC-HHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999877556777777655 4588899999999999999
Q ss_pred EEecChhHHH
Q 000628 423 VYQGPRDNVL 432 (1383)
Q Consensus 423 v~~G~~~~~~ 432 (1383)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 151
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-36 Score=320.09 Aligned_cols=204 Identities=26% Similarity=0.316 Sum_probs=173.6
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC----CcceEEEecCCC--CCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHD--LHHG 258 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~~--~~~~ 258 (1383)
++|+|||++|.+||..+|+|+||||||||.++|+|+.+|+ +|+|.++|.+..... ..+.+-+|+||| .+.|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 6999999999999999999999999999999999999998 999999998776543 347899999997 6678
Q ss_pred CCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc-cccccccC
Q 000628 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI-CADTMVGD 337 (1383)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg~ 337 (1383)
..||++.|.-..+..+... .+..+.++++.+||+. .++...-+
T Consensus 98 ~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l~R~P~e 141 (252)
T COG1124 98 RRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFLDRRPHE 141 (252)
T ss_pred chhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHHhcCchh
Confidence 8999999976544322110 1112566899999985 45555544
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+|||||..+|++|++|||||+||+..+.+|++.|.++.+..+.|.++. .|...-+..+||||+||
T Consensus 142 -----LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~I-sHdl~~v~~~cdRi~Vm 215 (252)
T COG1124 142 -----LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFI-SHDLALVEHMCDRIAVM 215 (252)
T ss_pred -----cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEE-eCcHHHHHHHhhheeee
Confidence 999999999999999999999999999999999999999999999998877676665 45667889999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000628 418 SEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1383)
++|++++.++.+++..
T Consensus 216 ~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 216 DNGQIVEIGPTEELLS 231 (252)
T ss_pred eCCeEEEeechhhhhc
Confidence 9999999999999864
No 152
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-36 Score=338.10 Aligned_cols=201 Identities=26% Similarity=0.375 Sum_probs=171.6
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVT 956 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 956 (1383)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +..|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 469999999999999999999999999999999999765 347999999987532 234567999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000628 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS--LNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1383)
Q Consensus 957 v~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1383)
|+||+.+...++ ....+...+.+.++++.+++.+ ..++. ++.|||||||||+||++|+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 999998865432 1223344566889999999985 55554 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999765 899999999975 56788999999985 889988875
No 153
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.4e-36 Score=332.39 Aligned_cols=194 Identities=26% Similarity=0.375 Sum_probs=165.8
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1383)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 469999999999999999999999999999999999765 347999999987532 124567999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000628 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1383)
Q Consensus 954 ~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1383)
.+|++||+.+....+. ...++.++.++++++.+++.+..++. +..||||||||++||++|+.+|++|+||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRAL-----PAELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988654321 22344456688999999998776665 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
|+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999777999999999975 46667999999975 54
No 154
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.9e-36 Score=351.51 Aligned_cols=206 Identities=30% Similarity=0.419 Sum_probs=176.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--CcceEEEecCCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 261 (1383)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+||++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 46999999999999999999999999999999999999997 999999999875432 2467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.|.+...+... . + ....++.+++.+||++..++.+++
T Consensus 131 v~e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~ll~~~~L~~~~~~~~~~---- 172 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------R----------E--------------IEAVIPSLLEFARLESKADARVSD---- 172 (340)
T ss_pred HHHHHHHHHHHcCCCH----------H----------H--------------HHHHHHHHHHHcCCchhhCCChhh----
Confidence 9999987544322100 0 0 011245678899999989999877
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+||+++|++++|||||+|||+.++.++.+.|+++++ .+.|++++.| ...++.++||+|++|++|+
T Consensus 173 -LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~g~tilisSH-~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 173 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTTH-FMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEECC-CHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999976 4677777665 4568999999999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
++++|+.+++.+
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 155
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.1e-36 Score=340.32 Aligned_cols=205 Identities=26% Similarity=0.309 Sum_probs=170.0
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQNDIHSP 953 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 953 (1383)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 469999999999999999999999999999999999765 347999999987532 124567999999999999
Q ss_pred CCCHHHHHHHHHHhh-----cCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000628 954 YVTVYESLLYSAWLR-----LSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1383)
Q Consensus 954 ~lTv~E~l~f~~~l~-----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~il 1028 (1383)
.+||+||+.+..... ..........+++++++++.++|.+..+.. +..||||||||++||++|+.+|++|
T Consensus 93 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 167 (243)
T TIGR02315 93 RLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR-----ADQLSGGQQQRVAIARALAQQPDLI 167 (243)
T ss_pred cccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999997642110 000111223345688999999998776665 4579999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1029 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||++++|.+ |++++.|+..
T Consensus 168 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 231 (243)
T TIGR02315 168 LADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA-GEIVFDGAPS 231 (243)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecCCHH
Confidence 999999999999999999999998764 899999999976 46678999999985 8898888753
No 156
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-36 Score=338.22 Aligned_cols=200 Identities=29% Similarity=0.419 Sum_probs=170.7
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1383)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+.+||++|++.+++.+||.|
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~e 89 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQD 89 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHHH
Confidence 469999999999999999999999999999999999765 347999999987642 2345899999999899999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000628 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1383)
Q Consensus 960 ~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1383)
|+.+....+ .....+..+.+.++++.++|.+..++. +..||||||||++||++|+.+|++|||||||+|||+
T Consensus 90 ~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~ 161 (255)
T PRK11248 90 NVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDA 161 (255)
T ss_pred HHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCH
Confidence 998764432 122334456689999999998776665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEec-CcEEEEecCC
Q 000628 1040 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKR-GGRVIYAGPL 1092 (1383)
Q Consensus 1040 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~-gG~~~~~g~~ 1092 (1383)
.++..+.+.|+++++ .|+|||++||+++ ++...+|++++|.+ +|+++..++.
T Consensus 162 ~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 162 FTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999854 5899999999986 57788999999984 5899888765
No 157
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-36 Score=342.68 Aligned_cols=214 Identities=27% Similarity=0.367 Sum_probs=178.7
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++ ++..+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 70 (274)
T PRK13647 5 IEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREVN 70 (274)
T ss_pred EEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 67888876552 12359999999999999999999999999999999999765 34799999998764
Q ss_pred h---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 935 Q---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
. ...++.+||++|++. .++..||.||+.|..... .....+.++.++++++.++|.+..++. +..||||
T Consensus 71 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSgG 142 (274)
T PRK13647 71 AENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKP-----PYHLSYG 142 (274)
T ss_pred CCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCC-----hhhCCHH
Confidence 2 234567999999973 445689999998864321 233344456689999999998877776 4579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 143 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 220 (274)
T PRK13647 143 QKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAEG 220 (274)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999975 46678999999975 8999998
Q ss_pred CC
Q 000628 1091 PL 1092 (1383)
Q Consensus 1091 ~~ 1092 (1383)
+.
T Consensus 221 ~~ 222 (274)
T PRK13647 221 DK 222 (274)
T ss_pred CH
Confidence 85
No 158
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-36 Score=322.84 Aligned_cols=210 Identities=28% Similarity=0.373 Sum_probs=181.8
Q ss_pred ccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh----cccceEEEEccCCCC
Q 000628 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE----TFARVSGYCEQNDIH 951 (1383)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~ 951 (1383)
..+...+++|||+++++||++||+||||||||||+|+|+|..++ ..|+|.++|.++... ..+..++--+|...+
T Consensus 13 ~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rl 90 (250)
T COG0411 13 RFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITRL 90 (250)
T ss_pred ecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeecccccc
Confidence 34567899999999999999999999999999999999997663 479999999986532 234568889999999
Q ss_pred CCCCCHHHHHHHHHHhhc--------CC-CCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh
Q 000628 952 SPYVTVYESLLYSAWLRL--------SS-DVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELV 1022 (1383)
Q Consensus 952 ~~~lTv~E~l~f~~~l~~--------~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~ 1022 (1383)
|+.|||.||+..++..+. +. ....++..+++.++|+.+||.+.+|...| +||+||||||.|||||+
T Consensus 91 F~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa 165 (250)
T COG0411 91 FPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALA 165 (250)
T ss_pred cCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHh
Confidence 999999999988754321 11 11245566778999999999999999865 69999999999999999
Q ss_pred hCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1023 ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1023 ~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
.+|++|+||||.+||.+.....+.+.|+++.+. |.||+++-|+++ -++..||++++|.. |+++..|++.+
T Consensus 166 ~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl~~-G~~IAeG~P~e 236 (250)
T COG0411 166 TQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVLNY-GEVIAEGTPEE 236 (250)
T ss_pred cCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEeccC-CcCcccCCHHH
Confidence 999999999999999999999999999999874 699999999998 48899999999985 89999999743
No 159
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.3e-36 Score=334.48 Aligned_cols=199 Identities=31% Similarity=0.447 Sum_probs=167.4
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh---c-ccceEEEEccCCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE---T-FARVSGYCEQNDIHSPYV 955 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~~l 955 (1383)
+.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 469999999999999999999999999999999999765 3479999999875321 1 245699999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000628 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELV-ELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1383)
Q Consensus 956 Tv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1383)
|++||+.+...... ..+..+.+.++++.+ ++.+..++. +..||||||||++|||+|+.+|++|+|||||
T Consensus 91 t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 160 (222)
T cd03224 91 TVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDEPS 160 (222)
T ss_pred cHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99999988654321 122334567788887 466655555 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 161 EGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 999999999999999999877899999999975 56788999999975 899988874
No 160
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.7e-36 Score=306.74 Aligned_cols=204 Identities=26% Similarity=0.386 Sum_probs=175.9
Q ss_pred CCcccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecC
Q 000628 179 SKKRSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQ 252 (1383)
Q Consensus 179 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q 252 (1383)
.+....++|+|||+.|++||++-|+||||||||||||+|.+...|+ +|+|.+||+++.... .+|.||+|+|
T Consensus 10 ~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQ 86 (223)
T COG2884 10 AYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQ 86 (223)
T ss_pred hcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEee
Confidence 3444566999999999999999999999999999999999999997 999999999987553 2589999999
Q ss_pred CCCCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccccc
Q 000628 253 HDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICAD 332 (1383)
Q Consensus 253 ~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 332 (1383)
|..++++.||.||++|+.+..|...+ +.+.++..+|+..||.+.++
T Consensus 87 D~rLL~~~tvyeNVA~pL~v~G~~~~----------------------------------~i~~rV~~~L~~VgL~~k~~ 132 (223)
T COG2884 87 DFRLLPDRTVYENVALPLRVIGKPPR----------------------------------EIRRRVSEVLDLVGLKHKAR 132 (223)
T ss_pred eccccccchHhhhhhhhhhccCCCHH----------------------------------HHHHHHHHHHHHhccchhhh
Confidence 99999999999999998877664311 12335677899999999998
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
...-+ |||||||||+||||++.+|++|+-||||-.||+..+.+|++.+.++.+ .|+|++++.| ...-+-..--
T Consensus 133 ~lP~~-----LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr-~GtTVl~ATH-d~~lv~~~~~ 205 (223)
T COG2884 133 ALPSQ-----LSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR-LGTTVLMATH-DLELVNRMRH 205 (223)
T ss_pred cCccc-----cCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh-cCcEEEEEec-cHHHHHhccC
Confidence 88766 999999999999999999999999999999999999999999999875 5788888765 4445556677
Q ss_pred eEEEEcCCeEEEec
Q 000628 413 DIILLSEGQIVYQG 426 (1383)
Q Consensus 413 ~i~lL~~G~iv~~G 426 (1383)
+++.|++|+++...
T Consensus 206 rvl~l~~Grl~~d~ 219 (223)
T COG2884 206 RVLALEDGRLVRDE 219 (223)
T ss_pred cEEEEeCCEEEecc
Confidence 99999999998754
No 161
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-36 Score=346.12 Aligned_cols=219 Identities=23% Similarity=0.314 Sum_probs=179.0
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.++... .....+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 67888887663110 0113599999999999999999999999999999999997653 4799999876531
Q ss_pred ---------------------------hhcccceEEEEccCC-CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHH
Q 000628 935 ---------------------------QETFARVSGYCEQND-IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVM 986 (1383)
Q Consensus 935 ---------------------------~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l 986 (1383)
....++.+|||+|++ ..+...||+||+.|..... ....++..+++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123467799999986 2344579999998865432 234455567789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000628 987 ELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1065 (1383)
Q Consensus 987 ~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 1065 (1383)
+.+||. +..++. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||++||+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566665 45799999999999999999999999999999999999999999999998779999999999
Q ss_pred CcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1066 PSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1066 ~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
++ ++.+.+|++++|.+ |++++.|+..
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~~ 250 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDTY 250 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 75 57788999999975 8999999863
No 162
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-36 Score=322.59 Aligned_cols=221 Identities=25% Similarity=0.360 Sum_probs=185.5
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCc----ceEEEecCCCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ----RTCAYISQHDLHH 257 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~~~~~ 257 (1383)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ ..++.-+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 5678999999999999999999999999999999999999998 99999999999887653 4688899999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
++|||.||+..++..+.. +...-...+.. .+ ..+.......+|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~~~~~--------~~-----------e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGRPRAR--------KE-----------EREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhccccch--------hh-----------HHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999988664421 00000000000 00 011223456799999999999999998
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+..+.|+++. -|...-++++||+|+||
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillI-EHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLI-EHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEE-EeccHHHhhhccEEEec
Confidence 999999999999999999999999999999999999999999999987555665554 56778999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000628 418 SEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1383)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999864
No 163
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-37 Score=345.18 Aligned_cols=244 Identities=25% Similarity=0.431 Sum_probs=197.6
Q ss_pred hcHHHHHHHHHHHhhhc------CCCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCccccee
Q 000628 113 EDNEKFLKRIRHRTDRV------GIEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRI 186 (1383)
Q Consensus 113 ~~~~~~~~~~~~~~~~~------~~~~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~i 186 (1383)
-|-|++++-+++..+-+ .+..++-.+.|+|++.. +.+.+++
T Consensus 507 iDmEnmfdllkee~eVvd~P~a~pl~~~~G~i~fsnvtF~---------------------------------Y~p~k~v 553 (790)
T KOG0056|consen 507 IDMENMFDLLKEEPEVVDLPGAPPLKVTQGKIEFSNVTFA---------------------------------YDPGKPV 553 (790)
T ss_pred hhHHHHHHHhhcCchhhcCCCCCCccccCCeEEEEEeEEe---------------------------------cCCCCce
Confidence 46677766665544432 34456678899988874 2345679
Q ss_pred eeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCCCCCCCCHH
Q 000628 187 LKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEMTVR 263 (1383)
Q Consensus 187 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~lTV~ 263 (1383)
|+||||++.||+.+|++||||+||||+|++|-..++.+ +|.|++||+++.... .|+.||.||||..+|++ |+.
T Consensus 554 l~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNd-TI~ 629 (790)
T KOG0056|consen 554 LSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFND-TIL 629 (790)
T ss_pred eecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceeecc-eee
Confidence 99999999999999999999999999999999999887 999999999986543 46789999999999975 999
Q ss_pred HHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC-
Q 000628 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG- 342 (1383)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG- 342 (1383)
.||+|+. |+...|+..+|++.+. ..| +++++++.++|.||+ ||
T Consensus 630 yNIryak-------------------------~~AsneevyaAAkAA~-----IHd---rIl~fPegY~t~VGE---RGL 673 (790)
T KOG0056|consen 630 YNIRYAK-------------------------PSASNEEVYAAAKAAQ-----IHD---RILQFPEGYNTRVGE---RGL 673 (790)
T ss_pred eheeecC-------------------------CCCChHHHHHHHHHhh-----HHH---HHhcCchhhhhhhhh---ccc
Confidence 9998862 2222333333333222 223 367899999999998 55
Q ss_pred -CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 343 -ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 343 -LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+|||++++.|.+++|||.||+||..+.++|..+|.+++. ++|.|+.-|. ..+.-.+|.|+++++|+
T Consensus 674 kLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvAHR--LSTivnAD~ILvi~~G~ 749 (790)
T KOG0056|consen 674 KLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVAHR--LSTIVNADLILVISNGR 749 (790)
T ss_pred ccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEeee--ehheecccEEEEEeCCe
Confidence 799999999999999999999999999999999999999999999986 5566665554 35677899999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
|++.|.++|++.
T Consensus 750 IvErG~HeeLl~ 761 (790)
T KOG0056|consen 750 IVERGRHEELLK 761 (790)
T ss_pred EeecCcHHHHHh
Confidence 999999999975
No 164
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-36 Score=344.96 Aligned_cols=218 Identities=24% Similarity=0.295 Sum_probs=178.3
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67888887663110 011459999999999999999999999999999999999765 34799999998763
Q ss_pred h-------hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000628 935 Q-------ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1383)
Q Consensus 935 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1383)
. ...++.+|||+|++. .+...||+||+.|..... ....++..+.++++++.++|. +..++. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 234567999999863 233479999998875322 233444556789999999996 556665 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCc
Q 000628 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1383)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1084 (1383)
.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|++++|. +|
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~-~G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMH-KG 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CC
Confidence 79999999999999999999999999999999999999999999999765 899999999976 5778899999997 48
Q ss_pred EEEEecCC
Q 000628 1085 RVIYAGPL 1092 (1383)
Q Consensus 1085 ~~~~~g~~ 1092 (1383)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999975
No 165
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1e-35 Score=340.47 Aligned_cols=215 Identities=21% Similarity=0.301 Sum_probs=179.4
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 467888876542 3469999999999999999999999999999999999765 3479999999875
Q ss_pred Chh------cccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000628 934 NQE------TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGL 1007 (1383)
Q Consensus 934 ~~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~L 1007 (1383)
... ..++.++|++|++.+++.+||.||+.+...... ........+.+.++++.++|.+..+.. +..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLM-----PSEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 321 235679999999999999999999987543211 122333445678899999998877776 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEE
Q 000628 1008 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1383)
Q Consensus 1008 SgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~ 1086 (1383)
|||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|++++|.+ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999975 57778999999975 899
Q ss_pred EEecCC
Q 000628 1087 IYAGPL 1092 (1383)
Q Consensus 1087 ~~~g~~ 1092 (1383)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 998875
No 166
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-36 Score=343.47 Aligned_cols=218 Identities=25% Similarity=0.357 Sum_probs=179.0
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 5678888766310 0011359999999999999999999999999999999999765 34799999998753
Q ss_pred h-------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000628 935 Q-------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1383)
Q Consensus 935 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1383)
. ..+++.+|||+|++ .+++ .||.|++.|..... ..+.++.++++.++++.++|. +..++. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 23567899999986 3444 69999999875432 233455566789999999995 455554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCc
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1084 (1383)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|.+ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 589999999999999999999999999999999999999999999999877999999999975 56678999999985 8
Q ss_pred EEEEecCCC
Q 000628 1085 RVIYAGPLG 1093 (1383)
Q Consensus 1085 ~~~~~g~~~ 1093 (1383)
++++.|++.
T Consensus 221 ~i~~~g~~~ 229 (288)
T PRK13643 221 HIISCGTPS 229 (288)
T ss_pred EEEEECCHH
Confidence 999999863
No 167
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-36 Score=329.75 Aligned_cols=197 Identities=35% Similarity=0.513 Sum_probs=167.5
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
+.+|+|+|+++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 46999999999999 999999999999999999999765 347999999987532 2345679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
.||+.+....+. ....+..+.++++++.++|.+..++. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 161 (211)
T cd03264 90 REFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKK-----IGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGL 161 (211)
T ss_pred HHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999988654431 22233455688999999998776665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
|+.++..+.+.|+++++ +.|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 162 D~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 162 DPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred CHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999976 599999999975 46678999999985 7887654
No 168
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.5e-36 Score=330.83 Aligned_cols=195 Identities=25% Similarity=0.360 Sum_probs=165.9
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-----hcccceEEEEccCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIHSPY 954 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~ 954 (1383)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 469999999999999999999999999999999999765 347999999987531 2345789999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000628 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1383)
Q Consensus 955 lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1383)
+|+.||+.+...... +...++..+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||
T Consensus 91 ~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEP~ 163 (213)
T cd03262 91 LTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAY-----PAQLSGGQQQRVAIARALAMNPKVMLFDEPT 163 (213)
T ss_pred CcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhC-----ccccCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999987643111 122334455688999999998776666 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+
T Consensus 164 ~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 164 SALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred cCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999877999999999975 56678999999985 54
No 169
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.1e-35 Score=331.08 Aligned_cols=209 Identities=25% Similarity=0.317 Sum_probs=173.4
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 45677766541 12469999999999999999999999999999999999765 34799999998653
Q ss_pred h---h---cccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000628 935 Q---E---TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 935 ~---~---~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1383)
. . .+++.++|++|++.+++.+|++||+.+....+ ....++..+.++++++.+++.+..++. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 2 1 24567999999998889999999998865432 123334445678999999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1087 (1383)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||++||+++ ++...+|++++|.+ |+++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 99999999999999999999999999999999999999999999877899999999976 56677899999985 6653
No 170
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.5e-35 Score=333.13 Aligned_cols=200 Identities=31% Similarity=0.443 Sum_probs=168.9
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
+.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~ 91 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSV 91 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcH
Confidence 469999999999999999999999999999999999765 347999999986532 1223579999999988889999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
+||+.+....+ ....+...+.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 92 ~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEP~~~L 163 (236)
T TIGR03864 92 RQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHRRRVEIARALLHRPALLLLDEPTVGL 163 (236)
T ss_pred HHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCC
Confidence 99998765432 1223334556889999999987766653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1038 DARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|+.++..+.+.|+++++ +|+|||+++|+++ ++ ..+|++++|.+ |++++.|+.
T Consensus 164 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~~ 216 (236)
T TIGR03864 164 DPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGAA 216 (236)
T ss_pred CHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCCH
Confidence 99999999999999975 5899999999976 34 45999999975 888888874
No 171
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=346.72 Aligned_cols=218 Identities=23% Similarity=0.348 Sum_probs=179.0
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++.. ....+.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~--------~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEK--------QENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 47899998876411 0012359999999999999999999999999999999999765 3479999999764
Q ss_pred Ch-------------------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc
Q 000628 934 NQ-------------------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK 992 (1383)
Q Consensus 934 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~ 992 (1383)
.. ...++.+|||+|++ .+++ .||+||+.|..... +.+.++..+++.++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23467899999987 3554 59999998864321 233444556788999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHH
Q 000628 993 -SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1071 (1383)
Q Consensus 993 -~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 1071 (1383)
+..++. +..||||||||++|||+|+.+|+||||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455554 4579999999999999999999999999999999999999999999999877999999999975 466
Q ss_pred HhhceEEEEecCcEEEEecCC
Q 000628 1072 EAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1072 ~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
+.+|++++|.+ |++++.|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 78999999985 899999985
No 172
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-35 Score=335.46 Aligned_cols=214 Identities=28% Similarity=0.394 Sum_probs=178.6
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56677765442 3469999999999999999999999999999999999765 34799999998753
Q ss_pred h----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 935 Q----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 935 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
. ...++.++|++|++.+++.+||.||+.+...++. ....++.+..++++++.+++.+..+.. ++.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 2 1235679999999999999999999987643221 122334456688999999998766655 4579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
||||++||++|+.+|++|+|||||+|||+.++..+.+.+++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999999877999999999975 57788999999975 8899888
Q ss_pred CC
Q 000628 1091 PL 1092 (1383)
Q Consensus 1091 ~~ 1092 (1383)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 173
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=336.52 Aligned_cols=215 Identities=21% Similarity=0.281 Sum_probs=178.7
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 367888876542 2469999999999999999999999999999999999765 3479999999765
Q ss_pred Ch----------------hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc-c
Q 000628 934 NQ----------------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-D 996 (1383)
Q Consensus 934 ~~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~-~ 996 (1383)
.. ..+++.++|++|++.+++.+||+||+.+...... .....+.++++.++++.+++.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 2345679999999999999999999987542111 123344456788999999997653 4
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhce
Q 000628 997 SMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1076 (1383)
Q Consensus 997 ~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~ 1076 (1383)
.. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++...||+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 44 4579999999999999999999999999999999999999999999999877999999999976 56667999
Q ss_pred EEEEecCcEEEEecCC
Q 000628 1077 LLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1077 ~~~l~~gG~~~~~g~~ 1092 (1383)
+++|.+ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999985 889988874
No 174
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.2e-35 Score=332.19 Aligned_cols=200 Identities=25% Similarity=0.300 Sum_probs=163.3
Q ss_pred eEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh------hcccceEEEEccCC--CCC
Q 000628 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ------ETFARVSGYCEQND--IHS 952 (1383)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~ 952 (1383)
.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++ .++
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 69999999999999999999999999999999999765 347999999987542 23456799999998 466
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000628 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1383)
Q Consensus 953 ~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1383)
+.+||+||+.+....... ....+..+..++++++.+++. +..+.. +..||||||||++|||+|+.+|++|+||
T Consensus 97 ~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLD 170 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRY-----PHELSGGQRQRVAIARALALNPKLLIAD 170 (228)
T ss_pred CcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCC-----chhcCHHHHHHHHHHHHHhcCCCEEEec
Confidence 789999999876543321 111111122235889999985 455555 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
|||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |+++..|
T Consensus 171 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 228 (228)
T cd03257 171 EPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-GKIVEEG 228 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-CEEEecC
Confidence 999999999999999999999866 899999999975 46668999999985 7887654
No 175
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=330.25 Aligned_cols=205 Identities=28% Similarity=0.414 Sum_probs=172.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--CcceEEEecCCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 261 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999999887 999999998765321 2357999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.+..+..+... . +....++.+++.+||++..++.+++
T Consensus 90 v~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (220)
T cd03265 90 GWENLYIHARLYGVPG----------A------------------------ERRERIDELLDFVGLLEAADRLVKT---- 131 (220)
T ss_pred HHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCCHHHhhCChhh----
Confidence 9999988643221100 0 0011356688999999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.++|++.|+ ..++.+++|+|++|.+|+
T Consensus 132 -LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~-~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 132 -YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHY-MEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999999876546677666554 557888999999999999
Q ss_pred EEEecChhHH
Q 000628 422 IVYQGPRDNV 431 (1383)
Q Consensus 422 iv~~G~~~~~ 431 (1383)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987653
No 176
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=328.75 Aligned_cols=200 Identities=32% Similarity=0.449 Sum_probs=167.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 262 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999999887 9999999998764332 4579999999999999999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.++....+.. .. + ....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03259 90 AENIAFGLKLRGVP----------KA----------E--------------IRARVRELLELVGLEGLLNRYPHE----- 130 (213)
T ss_pred HHHHHhHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCChhhhhcChhh-----
Confidence 99998753321100 00 0 011245678899998888888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.++||+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQ-EEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCH-HHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998764467777766554 578899999999999999
Q ss_pred EEec
Q 000628 423 VYQG 426 (1383)
Q Consensus 423 v~~G 426 (1383)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 177
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.2e-35 Score=345.13 Aligned_cols=230 Identities=20% Similarity=0.226 Sum_probs=183.3
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|++..++............+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 478888887664211000000011235699999999999999999999999999999999997653 479999999876
Q ss_pred Ch------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000628 934 NQ------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1383)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1383)
.. ..+++.++||+|++ .++|.+||.|++.+...... ...+.++.++.+.++++.++|. +..++. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 42 12456799999998 57889999999988654321 1234455667788999999994 345554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecC
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1083 (1383)
..|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|||++||+++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 999999999975 46678999999975
Q ss_pred cEEEEecCCC
Q 000628 1084 GRVIYAGPLG 1093 (1383)
Q Consensus 1084 G~~~~~g~~~ 1093 (1383)
|++++.|+..
T Consensus 238 G~ive~g~~~ 247 (331)
T PRK15079 238 GHAVELGTYD 247 (331)
T ss_pred CEEEEEcCHH
Confidence 8999999853
No 178
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9.1e-35 Score=364.44 Aligned_cols=218 Identities=28% Similarity=0.433 Sum_probs=179.4
Q ss_pred cccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEE
Q 000628 848 LPFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIK 927 (1383)
Q Consensus 848 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~ 927 (1383)
.+.....++|+|++|.++. +...+|+|+|++|+|||.+||+|+||||||||+|+|.|..+ +..|+|.
T Consensus 465 ~~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEE
Confidence 3445568999999998753 22369999999999999999999999999999999999876 3589999
Q ss_pred EcCccCC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-------cccc
Q 000628 928 ISGYPKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-------LNDS 997 (1383)
Q Consensus 928 i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~ 997 (1383)
+||++.+ ...+|+.+|||+|++.++. -|++||+.++. .+.+.+ .+.++++..|..+ -.++
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e----~i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDE----EIIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHH----HHHHHHHHhCcHHHHHhccccccc
Confidence 9999864 4668899999999998865 59999998753 222222 2344444444332 2355
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceE
Q 000628 998 MVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1077 (1383)
Q Consensus 998 ~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~ 1077 (1383)
.+|.. ..+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. .|+|+|+++|+++ ....+|++
T Consensus 602 ~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrI 677 (709)
T COG2274 602 PVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRI 677 (709)
T ss_pred ccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEE
Confidence 66654 45799999999999999999999999999999999999999999999986 5899999999975 78899999
Q ss_pred EEEecCcEEEEecCCC
Q 000628 1078 LLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1078 ~~l~~gG~~~~~g~~~ 1093 (1383)
++|+ +|+++.+|+.+
T Consensus 678 iVl~-~Gkiv~~gs~~ 692 (709)
T COG2274 678 IVLD-QGKIVEQGSHE 692 (709)
T ss_pred EEcc-CCceeccCCHH
Confidence 9997 58999999963
No 179
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-36 Score=308.91 Aligned_cols=217 Identities=28% Similarity=0.410 Sum_probs=182.4
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
|+.+|++|++. .+++|++||++++|||++||+|||||||||||++|+|...+ .+|++.++|.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 46678888763 46799999999999999999999999999999999997653 3799999999864
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000628 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1383)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1383)
. ..+.+..+.+||+..+....||+|-+.++..-.. ......+..+.++++|+..++.+++.+. ...|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~-~g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHR-SGREPEEDERIAAQALAATDLSGLAGRD-----YRTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhcccccc-cCCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCchH
Confidence 3 4556778999999998888999999998753211 1112223445578999999999888776 34799999
Q ss_pred HHHHHHHHHHhh------CCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1012 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1012 rqRl~ia~aL~~------~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
||||.+||.|+. ++++||||||||.||...+..++++.|+++++|..|+++-||++. ...++|++++|. +|+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~-~Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLH-QGR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeee-CCe
Confidence 999999999976 345899999999999999999999999999999999999999985 667899999997 589
Q ss_pred EEEecCCCc
Q 000628 1086 VIYAGPLGH 1094 (1383)
Q Consensus 1086 ~~~~g~~~~ 1094 (1383)
++..|++.+
T Consensus 219 v~a~g~p~~ 227 (259)
T COG4559 219 VIASGSPQD 227 (259)
T ss_pred EeecCCHHH
Confidence 999998754
No 180
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=341.06 Aligned_cols=216 Identities=26% Similarity=0.384 Sum_probs=180.3
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ +++.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 478888887652 12469999999999999999999999999999999999765 3479999999876
Q ss_pred C-----hhcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000628 934 N-----QETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGL 1007 (1383)
Q Consensus 934 ~-----~~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~L 1007 (1383)
. ...+++.+||++|++. .+...||+||+.+..... ..+.++..+.++++++.++|.+..++. ++.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 3 1235577999999974 234579999998864322 223444456789999999998877776 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEE
Q 000628 1008 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1383)
Q Consensus 1008 SgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~ 1086 (1383)
|||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...||++++|.+ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 899999999975 46668999999985 799
Q ss_pred EEecCCC
Q 000628 1087 IYAGPLG 1093 (1383)
Q Consensus 1087 ~~~g~~~ 1093 (1383)
++.|+..
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999863
No 181
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=342.48 Aligned_cols=217 Identities=22% Similarity=0.343 Sum_probs=177.8
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|...+ ..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67788887663110 0113599999999999999999999999999999999997653 4799999998763
Q ss_pred h-------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000628 935 Q-------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1383)
Q Consensus 935 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1383)
. ...++.+|||+|++ .+++ .||.||+.|..... ....++..+++.++++.+||. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----P 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23567899999986 3444 59999998865322 233445566789999999996 566655 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecC
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1083 (1383)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|.+
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 57999999999999999999999999999999999999999999999975 4899999999975 56678999999985
Q ss_pred cEEEEecCC
Q 000628 1084 GRVIYAGPL 1092 (1383)
Q Consensus 1084 G~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 899999875
No 182
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=341.59 Aligned_cols=216 Identities=24% Similarity=0.315 Sum_probs=180.4
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++.. ..+.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 36788888765310 12359999999999999999999999999999999999765 3479999999876
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
.. ...++.+||++|++. .++..||+||+.|..... ....++..+.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 42 234567999999974 667889999998865332 2344455667899999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..+|++++|.+ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999975 34 67999999975 89998
Q ss_pred ecCC
Q 000628 1089 AGPL 1092 (1383)
Q Consensus 1089 ~g~~ 1092 (1383)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8875
No 183
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2e-35 Score=334.40 Aligned_cols=214 Identities=26% Similarity=0.357 Sum_probs=175.7
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISGY 931 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g~ 931 (1383)
++++|+++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 45677765442 245999999999999999999999999999999999975421 12799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000628 932 PKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGLP 1002 (1383)
Q Consensus 932 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~~ 1002 (1383)
+... ...++.++|++|++.+++ .|++||+.+....+. .....+..+.++++++.++|. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 234567999999998888 999999988654331 122344456688999999997 444444
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|.+
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999976 599999999976 56778999999985
Q ss_pred CcEEEEecCC
Q 000628 1083 GGRVIYAGPL 1092 (1383)
Q Consensus 1083 gG~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 889988875
No 184
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=6.1e-36 Score=330.95 Aligned_cols=199 Identities=30% Similarity=0.448 Sum_probs=163.6
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCC--CCCCH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHS--PYVTV 957 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 957 (1383)
+.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. ..++.++|++|++.+. +.+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999765 34799999998653 3456799999998764 34899
Q ss_pred HHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCC
Q 000628 958 YESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1036 (1383)
Q Consensus 958 ~E~l~f~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsg 1036 (1383)
+||+.+....... .....+...+.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----IGELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 0011223345688999999998776665 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1037 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1037 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999877999999999976 56678999999974 5 55543
No 185
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=9.1e-36 Score=376.57 Aligned_cols=209 Identities=27% Similarity=0.437 Sum_probs=175.0
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~ 259 (1383)
++++|+|+|++++|||.+||+||||||||||+++|.|+++|+ +|+|.+||+++++... ++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 356999999999999999999999999999999999999997 9999999999987754 578999999999997
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
.||+|||.++.. +.+.++..+++..++. .|. + ..|++++||.||+ .
T Consensus 417 ~TI~~NI~~g~~-------------------------~at~eei~~a~k~a~~-----~d~-I--~~lp~g~dt~vge-~ 462 (567)
T COG1132 417 GTIRENIALGRP-------------------------DATDEEIEEALKLANA-----HEF-I--ANLPDGYDTIVGE-R 462 (567)
T ss_pred ccHHHHHhcCCC-------------------------CCCHHHHHHHHHHhCh-----HHH-H--HhCcccccceecC-C
Confidence 799999998632 1122333444443321 122 2 2358899999994 5
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
+..||||||||++||||++++|+||+||||||+||+.+...|.+.++++.+ ++|+++..|.+ .+...+|+|++|++
T Consensus 463 G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~iiIaHRl--sti~~aD~IiVl~~ 538 (567)
T COG1132 463 GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLIIAHRL--STIKNADRIIVLDN 538 (567)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEEEeccH--hHHHhCCEEEEEEC
Confidence 666999999999999999999999999999999999999999999997764 56888866655 45566999999999
Q ss_pred CeEEEecChhHHHH
Q 000628 420 GQIVYQGPRDNVLE 433 (1383)
Q Consensus 420 G~iv~~G~~~~~~~ 433 (1383)
|++++.|++++++.
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999975
No 186
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=332.67 Aligned_cols=210 Identities=30% Similarity=0.440 Sum_probs=174.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 262 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 46999999999999999999999999999999999999887 9999999998754332 3579999999999989999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.++....+...+ .+.. +....++.+++.+||++..++.+++
T Consensus 92 ~e~l~~~~~~~~~~~~-----------------~~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (239)
T cd03296 92 FDNVAFGLRVKPRSER-----------------PPEA-------------EIRAKVHELLKLVQLDWLADRYPAQ----- 136 (239)
T ss_pred HHHHhhhhhhcccccc-----------------CCHH-------------HHHHHHHHHHHHcCChhhhhcChhh-----
Confidence 9999886432211000 0000 0011245678899998877887776
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~-~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQ-EEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhCCEEEEEECCeE
Confidence 9999999999999999999999999999999999999999999999765567877777665 477889999999999999
Q ss_pred EEecChhHHH
Q 000628 423 VYQGPRDNVL 432 (1383)
Q Consensus 423 v~~G~~~~~~ 432 (1383)
++.|+.+++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999988763
No 187
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=338.05 Aligned_cols=208 Identities=23% Similarity=0.316 Sum_probs=175.4
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-------cceEEEecCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHD 254 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~ 254 (1383)
...++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 3467999999999999999999999999999999999999987 8999999998754321 24699999999
Q ss_pred CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccccccc
Q 000628 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTM 334 (1383)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 334 (1383)
.+++.+||+||+.+.....+... . + ....++.+++.+||++..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVPR----------A----------E--------------REERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCH----------H----------H--------------HHHHHHHHHHHcCCHhHhhCC
Confidence 99999999999988643221100 0 0 011345678899999888888
Q ss_pred ccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
+++ |||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++
T Consensus 158 ~~~-----LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~-~~~~~~~d~v 231 (269)
T cd03294 158 PDE-----LSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDL-DEALRLGDRI 231 (269)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhcCEE
Confidence 876 9999999999999999999999999999999999999999999998765567777776654 5788999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000628 415 ILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1383)
++|++|++++.|+++++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 188
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.1e-35 Score=328.99 Aligned_cols=197 Identities=24% Similarity=0.369 Sum_probs=170.1
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1383)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 469999999999999999999999999999999999765 34799999998764322 257999999999899999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000628 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1383)
Q Consensus 960 ~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1383)
|+.+....+. .. ...+.++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKK-----AKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhh-----HhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654331 11 23478899999998877765 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
.++..+++.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|++.
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999877999999999986 56678999999975 8999999864
No 189
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8.2e-36 Score=329.51 Aligned_cols=192 Identities=26% Similarity=0.379 Sum_probs=162.2
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEEccCCC-CCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDI-HSPYV 955 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 955 (1383)
+.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999765 347999999986532 234567999999975 46678
Q ss_pred CHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCC
Q 000628 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1035 (1383)
Q Consensus 956 Tv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1035 (1383)
|++||+.+..... ........+.++++++.++|.+..++. +..||||||||++|||+|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRS-----PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764332 122333445688999999998766665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1036 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1036 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
|||+.++..+.+.|++++++|+|||++||+++ ++...||++++|.+
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~ 209 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLED 209 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC
Confidence 99999999999999999877999999999975 56667999999975
No 190
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=335.71 Aligned_cols=206 Identities=22% Similarity=0.299 Sum_probs=175.0
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 478889887652 2469999999999999999999999999999999999765 3479999998764
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000628 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1383)
. ..++.++|++|++.+++.+||+||+.+... . ..++.+.++++.++|.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 345679999999999999999999987421 0 1234578899999998776665 4579999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|++||++|+.+|++|||||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999976 46678999999985 789888765
No 191
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2e-35 Score=328.85 Aligned_cols=195 Identities=26% Similarity=0.378 Sum_probs=163.7
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh---c---cc-ceEEEEccCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE---T---FA-RVSGYCEQNDIHS 952 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~---~---~~-~~~gyv~Q~~~~~ 952 (1383)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.... . ++ +.++|++|++.++
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 95 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLL 95 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccC
Confidence 469999999999999999999999999999999999765 3479999999875321 1 22 5699999999888
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000628 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1383)
Q Consensus 953 ~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1383)
+.+||+||+.+....+. ....+..+.+.++++.+++.+..++. +..||||||||++|||+|+.+|++|+|||
T Consensus 96 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~illlDE 167 (221)
T TIGR02211 96 PDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHR-----PSELSGGERQRVAIARALVNQPSLVLADE 167 (221)
T ss_pred CCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 89999999988654321 12233345678999999998776665 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEE
Q 000628 1033 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1383)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1087 (1383)
||+|||+.++..+.+.|++++++ |+|||++||+++ ..+.+|++++|.+ |+++
T Consensus 168 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~--~~~~~d~v~~l~~-G~i~ 220 (221)
T TIGR02211 168 PTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE--LAKKLDRVLEMKD-GQLF 220 (221)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEEEeC-CEec
Confidence 99999999999999999999764 899999999975 3456899999985 6654
No 192
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=340.13 Aligned_cols=218 Identities=26% Similarity=0.393 Sum_probs=176.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-----CcceEEEecCCCC-CC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-----PQRTCAYISQHDL-HH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~~~-~~ 257 (1383)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999987 999999999886532 2467999999863 34
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc--ccccccc
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD--ICADTMV 335 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 335 (1383)
...||+||+.|+....+.. +. +....++++++.+||+ +..|+.+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~~ 142 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------EE------------------------EIENRVKRAMNIVGLDYEDYKDKSP 142 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------HH------------------------HHHHHHHHHHHHcCCCchhhccCCc
Confidence 4679999998864322110 00 0112356788999997 5677777
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
.+ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++.|+ ..++.++||+|+
T Consensus 143 ~~-----LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd-~~~~~~~~drv~ 216 (287)
T PRK13637 143 FE-----LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHS-MEDVAKLADRII 216 (287)
T ss_pred cc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEE
Confidence 65 999999999999999999999999999999999999999999999977556777777655 457888999999
Q ss_pred EEcCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000628 416 LLSEGQIVYQGPRDNVLE---FFEHMGFKCPE 444 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~~---~f~~lGf~~p~ 444 (1383)
+|++|++++.|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988753 23344555443
No 193
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=332.25 Aligned_cols=205 Identities=28% Similarity=0.372 Sum_probs=173.5
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHHG 258 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~~ 258 (1383)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999987 899999999876432 1457999999999999
Q ss_pred CCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCc
Q 000628 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1383)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1383)
.+||+||+.+.....+... . + ....++..++.+||++..++.+.+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~- 140 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------A----------E--------------IEERVLELLELVGLEDKADAYPAQ- 140 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------H----------H--------------HHHHHHHHHHHCCChhhhhcChhh-
Confidence 9999999987543221100 0 0 011245678899998888887765
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|+
T Consensus 141 ----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~-~~~~~~~d~i~~l~ 215 (233)
T cd03258 141 ----LSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEM-EVVKRICDRVAVME 215 (233)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999998765567777776654 57788999999999
Q ss_pred CCeEEEecChhHHH
Q 000628 419 EGQIVYQGPRDNVL 432 (1383)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1383)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987763
No 194
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.7e-35 Score=331.10 Aligned_cols=215 Identities=25% Similarity=0.382 Sum_probs=174.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 46999999999999999999999999999999999999887 8999999998765432 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.+.....+... .... .. .... .+....++.+++.+||++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~~-------~~~~---~~-~~~~-------------~~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-------LLLA---RA-RREE-------------REARERAEELLERVGLADLADRPAGE-- 143 (236)
T ss_pred CCHHHHHHHHHhhccccc-------cccc---cc-cccH-------------HHHHHHHHHHHHHcCccchhhCChhh--
Confidence 999999988643221000 0000 00 0000 00112356788899998878887766
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++
T Consensus 144 ---LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vsH~~-~~~~~~~d~i~~l~~ 218 (236)
T cd03219 144 ---LSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RGITVLLVEHDM-DVVMSLADRVTVLDQ 218 (236)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEecCH-HHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999876 467777776654 478889999999999
Q ss_pred CeEEEecChhHHH
Q 000628 420 GQIVYQGPRDNVL 432 (1383)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1383)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 195
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2e-35 Score=343.53 Aligned_cols=206 Identities=30% Similarity=0.412 Sum_probs=174.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--CcceEEEecCCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 261 (1383)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 45999999999999999999999999999999999999887 999999999875322 2467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.+..+..+... .+ ....++.+++.+||++..++.+++
T Consensus 94 v~e~l~~~~~~~~~~~--------------------~~--------------~~~~~~~ll~~~~l~~~~~~~~~~---- 135 (303)
T TIGR01288 94 VRENLLVFGRYFGMST--------------------RE--------------IEAVIPSLLEFARLESKADVRVAL---- 135 (303)
T ss_pred HHHHHHHHHHHcCCCH--------------------HH--------------HHHHHHHHHHHCCChhHhcCchhh----
Confidence 9999986433221100 00 011245678899999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++.|++ .++.++||+|++|++|+
T Consensus 136 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~til~~sH~~-~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 136 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTTHFM-EEAERLCDRLCVLESGR 212 (303)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEECCCH-HHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999876 467777776554 58889999999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
+++.|+++++..
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988754
No 196
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.5e-35 Score=334.51 Aligned_cols=202 Identities=25% Similarity=0.328 Sum_probs=171.6
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----------------hcccceEE
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----------------ETFARVSG 943 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----------------~~~~~~~g 943 (1383)
+.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 469999999999999999999999999999999999765 347999999986531 13456799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 000628 944 YCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVA 1023 (1383)
Q Consensus 944 yv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~ 1023 (1383)
|++|++.+++..|+.||+.+..... ........++.++++++.+++.+..+.. +..||||||||++||++|+.
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~laral~~ 163 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM-----PAQLSGGQQQRVAIARALAM 163 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC-----hhhcCHHHHHHHHHHHHHHc
Confidence 9999999999999999998754221 1123344456688999999998776665 45799999999999999999
Q ss_pred CCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1024 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1024 ~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|.+ |++++.|+.
T Consensus 164 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 164 RPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVCFFDK-GRIVEQGKP 231 (252)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999998765 899999999976 56678999999975 899988874
No 197
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=332.08 Aligned_cols=213 Identities=24% Similarity=0.355 Sum_probs=177.4
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 56777766542 2469999999999999999999999999999999999765 34799999998642
Q ss_pred ---------hhcccceEEEEccCCCCCCCCCHHHHHHHHH-HhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000628 935 ---------QETFARVSGYCEQNDIHSPYVTVYESLLYSA-WLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGV 1004 (1383)
Q Consensus 935 ---------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~-~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 1004 (1383)
....++.++|++|++.+++.+||.||+.+.. ... .....+..+.+.++++.+|+.+..+.. +
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~ 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRF-----P 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----h
Confidence 1234567999999999999999999997532 221 122333445688999999998777766 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCc
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1084 (1383)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999976 56678999999985 8
Q ss_pred EEEEecCC
Q 000628 1085 RVIYAGPL 1092 (1383)
Q Consensus 1085 ~~~~~g~~ 1092 (1383)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 99998875
No 198
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=335.45 Aligned_cols=218 Identities=22% Similarity=0.238 Sum_probs=178.0
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 367788776542 3469999999999999999999999999999999999765 3479999999875
Q ss_pred Chh---c-ccceEEEEccCCCCCCCCCHHHHHHHHHHhhcC----------C--CCcHHHHHHHHHHHHHHcCCcccccc
Q 000628 934 NQE---T-FARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS----------S--DVDTKKRKMFVDEVMELVELKSLNDS 997 (1383)
Q Consensus 934 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~----------~--~~~~~~~~~~v~~~l~~l~L~~~~~~ 997 (1383)
... . .+..++|++|++.+++.+||+||+.+....... . .....+..+.++++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 421 1 234589999999999999999999885431100 0 00112233567889999999877776
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhce
Q 000628 998 MVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1076 (1383)
Q Consensus 998 ~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~ 1076 (1383)
. +..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||+
T Consensus 150 ~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 Q-----AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 6 3579999999999999999999999999999999999999999999999875 899999999976 56678999
Q ss_pred EEEEecCcEEEEecCCC
Q 000628 1077 LLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1077 ~~~l~~gG~~~~~g~~~ 1093 (1383)
+++|++ |++++.|+..
T Consensus 224 i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEEC-CeEEecCCHH
Confidence 999975 8899988753
No 199
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=340.15 Aligned_cols=218 Identities=24% Similarity=0.316 Sum_probs=177.4
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.++.. ....+.+|+|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~~~--------~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13641 3 IKFENVDYIYSPG--------TPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHIT 72 (287)
T ss_pred EEEEEEEEEcCCC--------CCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 5677777654210 0001459999999999999999999999999999999999765 35899999998753
Q ss_pred h-------hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000628 935 Q-------ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1383)
Q Consensus 935 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1383)
. ...++.+||++|++. .+..+||.||+.|..... ....++..++++++++.++|. +..++. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (287)
T PRK13641 73 PETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----PF 144 (287)
T ss_pred cccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----cc
Confidence 2 234567999999973 233589999998765332 223445556789999999996 566665 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||++||+++ ++.+.||++++|.+ |+
T Consensus 145 ~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~ 222 (287)
T PRK13641 145 ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GK 222 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999877999999999975 56788999999985 89
Q ss_pred EEEecCC
Q 000628 1086 VIYAGPL 1092 (1383)
Q Consensus 1086 ~~~~g~~ 1092 (1383)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13641 223 LIKHASP 229 (287)
T ss_pred EEEeCCH
Confidence 9998875
No 200
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-35 Score=327.22 Aligned_cols=201 Identities=27% Similarity=0.352 Sum_probs=169.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 263 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999887 9999999998763 346799999999999989999
Q ss_pred HHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCC
Q 000628 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1383)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1383)
||+.+.....+... . + ....++.+++.+||++..++.+++ |
T Consensus 92 e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------A----------E--------------ARERAEELLELVGLSGFENAYPHQ-----L 132 (220)
T ss_pred HHHHHHHHHcCCCH----------H----------H--------------HHHHHHHHHHHcCChhhhhCCccc-----C
Confidence 99988643221100 0 0 011346688899998878887766 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc--CCe
Q 000628 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS--EGQ 421 (1383)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~--~G~ 421 (1383)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDI-DEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCH-HHHHHhCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999999999998665567777776665 47788999999999 799
Q ss_pred EEEecChh
Q 000628 422 IVYQGPRD 429 (1383)
Q Consensus 422 iv~~G~~~ 429 (1383)
++..++.+
T Consensus 212 i~~~~~~~ 219 (220)
T cd03293 212 IVAEVEVD 219 (220)
T ss_pred EEEEEEec
Confidence 99888753
No 201
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=335.91 Aligned_cols=205 Identities=23% Similarity=0.311 Sum_probs=173.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCC-CCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL-HHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~-~~~~ 259 (1383)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35899999999999999999999999999999999999987 9999999998865322 357999999973 6777
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.|+.+..+.. .. + ....++.+++.+||++..+..+++
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13650 97 ATVEDDVAFGLENKGIP----------HE----------E--------------MKERVNEALELVGMQDFKEREPAR-- 140 (279)
T ss_pred ccHHHHHHhhHHhCCCC----------HH----------H--------------HHHHHHHHHHHCCCHhHhhCCccc--
Confidence 89999998864322110 00 0 012356788999999888888776
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|++++.|+.. ++ ..+|+|++|++
T Consensus 141 ---LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~ 215 (279)
T PRK13650 141 ---LSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998755788888877754 55 58999999999
Q ss_pred CeEEEecChhHHH
Q 000628 420 GQIVYQGPRDNVL 432 (1383)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1383)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (279)
T PRK13650 216 GQVESTSTPRELF 228 (279)
T ss_pred CEEEEECCHHHHH
Confidence 9999999998875
No 202
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=332.27 Aligned_cols=213 Identities=23% Similarity=0.338 Sum_probs=176.1
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 367888876542 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Chh----cccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 000628 934 NQE----TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELV-ELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 934 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~~g~~~~~~LS 1008 (1383)
... ..++.++|++|++.+++.+||.||+.+..... ..++..+.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 431 23567999999999999999999998754221 1122334567778877 466555544 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999975 57889999999985 89999
Q ss_pred ecCCC
Q 000628 1089 AGPLG 1093 (1383)
Q Consensus 1089 ~g~~~ 1093 (1383)
.|++.
T Consensus 218 ~~~~~ 222 (237)
T PRK11614 218 EDTGD 222 (237)
T ss_pred eCCHH
Confidence 98853
No 203
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=338.28 Aligned_cols=200 Identities=23% Similarity=0.324 Sum_probs=170.6
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccCCC-CCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDI-HSPY 954 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~-~~~~ 954 (1383)
+.+|+||||+|++||++||+||||||||||+++|+|..+ +..|+|.++|.+... ...++.+||++|++. .+..
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 359999999999999999999999999999999999765 347999999987632 234567999999975 3567
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000628 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1383)
Q Consensus 955 lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1383)
.|+.||+.+..... .....+.++.++++++.++|.+..+.. +..||||||||++||+||+.+|+||||||||
T Consensus 93 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLDEPt 164 (274)
T PRK13644 93 RTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRS-----PKTLSGGQGQCVALAGILTMEPECLIFDEVT 164 (274)
T ss_pred chHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998765332 223444456788999999998877766 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
+|||+.++..+++.|++++++|+|||++||+++ ++ ..+|++++|.+ |++++.|+.
T Consensus 165 ~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~g~~ 219 (274)
T PRK13644 165 SMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLEGEP 219 (274)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999877999999999976 34 67999999985 899999885
No 204
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.7e-35 Score=341.96 Aligned_cols=205 Identities=29% Similarity=0.442 Sum_probs=175.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--CcceEEEecCCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 261 (1383)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999987 999999999875432 2467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|.||+.|.++..+... .+ ....++.+++.+||++..++.+++
T Consensus 92 v~e~l~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~~gl~~~~~~~~~~---- 133 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG--------------------QL--------------LKQRVEEMIELVGLRPEQHKKIGQ---- 133 (301)
T ss_pred HHHHHHHHHHHcCCCH--------------------HH--------------HHHHHHHHHHHCCCchHhcCchhh----
Confidence 9999998655432110 00 011356788999999988888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+||+++|++++|||||+|||+.++.++.+.|+++++ +.|++++.| ...++.++||+|++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiii~sH-~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 134 -LSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--DKTIILSTH-IMQEVEAICDRVIIINKGK 209 (301)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--CCEEEEEcC-CHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999854 567666655 4558999999999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
+++.|+.+++.+
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998764
No 205
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3e-35 Score=325.45 Aligned_cols=200 Identities=29% Similarity=0.398 Sum_probs=169.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 262 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 35999999999999999999999999999999999999887 9999999998754332 3579999999999989999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.+..+..+.. .. + ....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03301 90 YDNIAFGLKLRKVP----------KD----------E--------------IDERVREVAELLQIEHLLDRKPKQ----- 130 (213)
T ss_pred HHHHHHHHHhcCCC----------HH----------H--------------HHHHHHHHHHHcCCHHHHhCChhh-----
Confidence 99998864322110 00 0 011346678899999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|++
T Consensus 131 LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~-~~~~~~~d~i~~l~~g~~ 209 (213)
T cd03301 131 LSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQ-VEAMTMADRIAVMNDGQI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999865567877777654 578889999999999999
Q ss_pred EEec
Q 000628 423 VYQG 426 (1383)
Q Consensus 423 v~~G 426 (1383)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03301 210 QQIG 213 (213)
T ss_pred EecC
Confidence 9876
No 206
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-35 Score=332.20 Aligned_cols=214 Identities=29% Similarity=0.387 Sum_probs=173.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 257 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999887 899999999876543 135799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+||+||+.++...... .. ..+ .+... . .....++.+++.+||++..++.+++
T Consensus 91 ~~~tv~~~l~~~~~~~~~--~~---~~~------~~~~~-~--------------~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (241)
T cd03256 91 ERLSVLENVLSGRLGRRS--TW---RSL------FGLFP-K--------------EEKQRALAALERVGLLDKAYQRADQ 144 (241)
T ss_pred ccCcHHHHHHhhhcccch--hh---hhh------cccCc-H--------------HHHHHHHHHHHHcCChhhhCCCccc
Confidence 999999999875321100 00 000 00000 0 0012345678899998777777765
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|
T Consensus 145 -----LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~-~~~~~~~d~v~~l 218 (241)
T cd03256 145 -----LSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQV-DLAREYADRIVGL 218 (241)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998765567777776654 5788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000628 418 SEGQIVYQGPRDNVL 432 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1383)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 207
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-35 Score=331.95 Aligned_cols=216 Identities=24% Similarity=0.293 Sum_probs=176.4
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcCc
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISGY 931 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g~ 931 (1383)
+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 56777776542 24699999999999999999999999999999999997542 135899999998
Q ss_pred cCCh---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccCCCC
Q 000628 932 PKNQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGLPGV 1004 (1383)
Q Consensus 932 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~~~~ 1004 (1383)
++.. ...++.+||++|++.+++.+||.||+.+....+.. .....+..+.++++++.++|.+ ..+.. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7532 34556799999999888999999999886533211 1122344566889999999854 23333 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCc
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1084 (1383)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|.+ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999864 899999999976 56678999999975 8
Q ss_pred EEEEecCC
Q 000628 1085 RVIYAGPL 1092 (1383)
Q Consensus 1085 ~~~~~g~~ 1092 (1383)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 99988875
No 208
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.1e-33 Score=375.79 Aligned_cols=135 Identities=22% Similarity=0.270 Sum_probs=109.2
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000628 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1026 (1383)
Q Consensus 951 ~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~ia~aL~---~~p~ 1026 (1383)
.+...||.|+|.++..-........++..+.+ ++++.+||.+. .++. +..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45678999999887653222122233444556 58899999875 5655 3579999999999999998 5999
Q ss_pred CceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe-----cCcEEEEecCCC
Q 000628 1027 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGRVIYAGPLG 1093 (1383)
Q Consensus 1027 illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gG~~~~~g~~~ 1093 (1383)
+|+|||||+|||+.+...+++.|++++++|.|||+++|+++ ....+|+++.|. .+|+++..|++.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~--~i~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH--VVKVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHHhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999975 348999999995 368999999864
No 209
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=332.95 Aligned_cols=214 Identities=26% Similarity=0.334 Sum_probs=175.3
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1383)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 578888876442 24699999999999999999999999999999999997542 12589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+... ..+++.++|++|++.+++ +|++||+.+....+ ....++.++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 234567999999988887 89999998865432 1223344456888999998842 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..|||||||||+|||+|+.+|++|||||||+|||+.++..+.+.|+++++ |+|||++||+++ ++.+.+|++++|.
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 899999999975 5667899999997
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|++
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 210
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-35 Score=332.68 Aligned_cols=217 Identities=25% Similarity=0.300 Sum_probs=176.9
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1383)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 367888876542 245999999999999999999999999999999999976532 2479999999
Q ss_pred ccCC-----hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.++. ...+++.++|++|++.+++.+||.||+.+....+.. ....+...+.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8753 123456799999999999999999999886543211 1123334456788999999853 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++...+|++++|.
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999976 5677899999997
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 211
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=332.42 Aligned_cols=215 Identities=23% Similarity=0.294 Sum_probs=175.0
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|||++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 578888876552 245999999999999999999999999999999999975431 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 1001 (1383)
.++.. ...++.++|++|++.+++ +||+||+.+...... .......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234667999999988775 899999988653321 112233456688889998873 233443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
++.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|+++ ++.+.+|++++|.
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46899999999999999999999999999999999999999999999996 4799999999986 5667899999997
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 899988875
No 212
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.4e-35 Score=330.95 Aligned_cols=207 Identities=23% Similarity=0.272 Sum_probs=167.6
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hc-ccceEEEEccCCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET-FARVSGYCEQNDIHSPYV 955 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~-~~~~~gyv~Q~~~~~~~l 955 (1383)
+.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+... .. .+..++|++|++.+++.+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGV 92 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccCCc
Confidence 46999999999999999999999999999999999973111357999999987532 12 233489999999999999
Q ss_pred CHHHHHHHHHHhhcCC----CCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000628 956 TVYESLLYSAWLRLSS----DVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1383)
Q Consensus 956 Tv~E~l~f~~~l~~~~----~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1383)
|++|++.+........ .....+..+.++++++.++|. +..+..++ ..|||||||||+||++|+.+|++|+|
T Consensus 93 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~llll 168 (243)
T TIGR01978 93 SNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLAIL 168 (243)
T ss_pred CHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEEEe
Confidence 9999998764322110 112233345688999999997 45555431 24999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-hceEEEEecCcEEEEecCC
Q 000628 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gG~~~~~g~~ 1092 (1383)
||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|.+ |++++.|+.
T Consensus 169 DEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~i~~~g~~ 229 (243)
T TIGR01978 169 DEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GRIVKSGDV 229 (243)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CEEEEecCH
Confidence 9999999999999999999999877999999999975 45555 799999974 899988875
No 213
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-35 Score=348.57 Aligned_cols=207 Identities=22% Similarity=0.303 Sum_probs=176.7
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-------cceEEEecCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~ 255 (1383)
...+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 346899999999999999999999999999999999999987 9999999998865432 247999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1383)
+++++||+||+.|.....+... . + ....++.+++.+||++..++.+
T Consensus 117 l~~~~Tv~enl~~~~~~~~~~~----------~----------~--------------~~~~~~e~L~~~gL~~~~~~~~ 162 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAGINA----------E----------E--------------RREKALDALRQVGLENYAHSYP 162 (400)
T ss_pred CCCCCCHHHHHHHHHHhcCCCH----------H----------H--------------HHHHHHHHHHHcCCChhhhcCc
Confidence 9999999999998754332110 0 0 0113466889999998888888
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
.+ |||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+..++|+|++.|+ ..++.+++|+|+
T Consensus 163 ~~-----LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd-~~~~~~~~Dri~ 236 (400)
T PRK10070 163 DE-----LSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHD-LDEAMRIGDRIA 236 (400)
T ss_pred cc-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECC-HHHHHHhCCEEE
Confidence 76 999999999999999999999999999999999999999999999876557777777655 458889999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000628 416 LLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1383)
+|++|+++..|+++++.
T Consensus 237 vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 237 IMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEECCEEEecCCHHHHH
Confidence 99999999999998874
No 214
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-35 Score=301.52 Aligned_cols=201 Identities=28% Similarity=0.437 Sum_probs=177.5
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1383)
..+|+|||++|.+||.+.++||||||||||||+++|..+ +..|.|.+||.++.... ...|.|+|++.++|.+||.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCC--ccceeEeccCccchhhHHHH
Confidence 459999999999999999999999999999999999877 45899999999875432 23589999999999999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000628 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1383)
Q Consensus 960 ~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1383)
|+.|+..++ .+.+.++.+.+.+.+..+||.+..++.+ -.||||||||+.|||||+.+|++|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999999887 4678889999999999999999888774 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhhceEEEEecC-cEEEEecCCC
Q 000628 1040 RAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRG-GRVIYAGPLG 1093 (1383)
Q Consensus 1040 ~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g-G~~~~~g~~~ 1093 (1383)
-+++.++++|-++. ++|+.++++||+.+ |..-.++++++|+.+ |+++..-|++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 99999999999986 45999999999875 455578999999743 6788776653
No 215
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=349.95 Aligned_cols=203 Identities=22% Similarity=0.285 Sum_probs=174.1
Q ss_pred cceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hc----ccceEEEEccCCCC
Q 000628 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ET----FARVSGYCEQNDIH 951 (1383)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q~~~~ 951 (1383)
...+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. .. .++.+||++|++.+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 3458999999999999999999999999999999999765 347999999987642 11 13579999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000628 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1383)
Q Consensus 952 ~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1383)
++.+||+||+.|....+. ...++..+.++++++.++|.+..++. ++.|||||||||+|||||+.+|++||||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~-----~~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSY-----PDELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998765431 23344556788999999998877776 4579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1032 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
|||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|.+ |+++..|+..
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~~ 250 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTPD 250 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCHH
Confidence 99999999999999999999875 4899999999976 56778999999985 8999888753
No 216
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=336.59 Aligned_cols=215 Identities=23% Similarity=0.360 Sum_probs=178.4
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.++ ++..+|+||||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 56777776542 12359999999999999999999999999999999999765 35899999998753
Q ss_pred h---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 935 Q---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
. ...++.+||++|++. .+...||.||+.+..... ....+..++.++++++.++|.+..++. ++.||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRV-----PHHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCCHH
Confidence 2 234567999999974 344689999998765322 233444556789999999998877776 4579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999875 899999999976 56788999999985 799999
Q ss_pred cCCC
Q 000628 1090 GPLG 1093 (1383)
Q Consensus 1090 g~~~ 1093 (1383)
|+..
T Consensus 220 g~~~ 223 (277)
T PRK13652 220 GTVE 223 (277)
T ss_pred CCHH
Confidence 8753
No 217
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=333.53 Aligned_cols=214 Identities=28% Similarity=0.394 Sum_probs=177.0
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.++ ++.+|+|+|+++++|++++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56777765542 3469999999999999999999999999999999999755 34799999998653
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000628 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1383)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1383)
. ...++.++|++|++.+++.+||+||+.+..... ....+..++.++++++.++|.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 234567999999998888899999998754221 1112233456789999999987777764 5799999
Q ss_pred HHHHHHHHHHh------hCCCCceeeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhhceEEEEecCc
Q 000628 1012 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1383)
Q Consensus 1012 rqRl~ia~aL~------~~p~illLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1084 (1383)
||||+||++|+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||++||+++ ++...+|++++|.+ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999997 67999999999975 56678999999985 7
Q ss_pred EEEEecCCC
Q 000628 1085 RVIYAGPLG 1093 (1383)
Q Consensus 1085 ~~~~~g~~~ 1093 (1383)
++++.|+..
T Consensus 218 ~i~~~~~~~ 226 (258)
T PRK13548 218 RLVADGTPA 226 (258)
T ss_pred EEEeeCCHH
Confidence 898888753
No 218
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.5e-35 Score=328.62 Aligned_cols=195 Identities=24% Similarity=0.350 Sum_probs=163.4
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 257 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999887 899999999875432 235799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+||+||+.+..+..+... . +....++.+++.+||++..++.+++
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 138 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------R------------------------DANERVSAALEKVGLEGKAHALPMQ 138 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------H------------------------HHHHHHHHHHHHcCChhhhhCChhh
Confidence 99999999988643221100 0 0011345678899998888888776
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.++||+|++|
T Consensus 139 -----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vsH~~-~~~~~~~d~i~~l 211 (216)
T TIGR00960 139 -----LSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-RGTTVLVATHDI-NLVETYRHRTLTL 211 (216)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999865 367777766554 5778899999999
Q ss_pred cCCeE
Q 000628 418 SEGQI 422 (1383)
Q Consensus 418 ~~G~i 422 (1383)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99975
No 219
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.1e-35 Score=328.84 Aligned_cols=205 Identities=24% Similarity=0.369 Sum_probs=172.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 46999999999999999999999999999999999999987 9999999998754332 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.+.....+.. . .+ ....++.+++.+||++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 133 (232)
T cd03218 90 LTVEENILAVLEIRGLS----------K----------KE--------------REEKLEELLEEFHITHLRKSKASS-- 133 (232)
T ss_pred CcHHHHHHHHHHhcCCC----------H----------HH--------------HHHHHHHHHHHcCChhhhhCChhh--
Confidence 99999998753221110 0 00 011346688899998888888776
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++
T Consensus 134 ---LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tii~~sH~~-~~~~~~~d~i~~l~~ 208 (232)
T cd03218 134 ---LSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-RGIGVLITDHNV-RETLSITDRAYIIYE 208 (232)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999876 366777776654 488899999999999
Q ss_pred CeEEEecChhHHH
Q 000628 420 GQIVYQGPRDNVL 432 (1383)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1383)
|++++.|+.+++.
T Consensus 209 G~i~~~~~~~~~~ 221 (232)
T cd03218 209 GKVLAEGTPEEIA 221 (232)
T ss_pred CeEEEEeCHHHhh
Confidence 9999999988763
No 220
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.6e-35 Score=377.13 Aligned_cols=205 Identities=28% Similarity=0.400 Sum_probs=171.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
+++|+|+|++|+|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 46899999999999999999999999999999999999997 9999999999987654 578999999999986 5
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++|||.++.. . +.++..+++...+. +.. .-.|++..||.+|+ .+
T Consensus 542 TI~eNi~~~~~-~-------------------------~~e~i~~al~~a~l------~~~--i~~lp~G~dt~ige-~G 586 (686)
T TIGR03797 542 SIFENIAGGAP-L-------------------------TLDEAWEAARMAGL------AED--IRAMPMGMHTVISE-GG 586 (686)
T ss_pred cHHHHHhcCCC-C-------------------------CHHHHHHHHHHcCc------HHH--HHhccccccccccC-CC
Confidence 99999988522 0 11112222222221 111 12467889999996 46
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
..||||||||++||||++++|++|+||||||+||+.++.++.+.|+++ ++|+|+..|++ ++.+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~IiItHr~--~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIVIAHRL--STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEEEecCh--HHHHcCCEEEEEECC
Confidence 779999999999999999999999999999999999999999999875 46888887765 677889999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
+++++|+++++++
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 221
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.4e-35 Score=327.96 Aligned_cols=203 Identities=29% Similarity=0.411 Sum_probs=170.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--CcceEEEecCCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 261 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999999887 999999999875421 2356999999999998999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.+..+..+... .+ ....++.+++.+||++..++.+++
T Consensus 92 v~~~l~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~---- 133 (220)
T cd03263 92 VREHLRFYARLKGLPK--------------------SE--------------IKEEVELLLRVLGLTDKANKRART---- 133 (220)
T ss_pred HHHHHHHHHHHcCCCH--------------------HH--------------HHHHHHHHHHHcCCHHHHhChhhh----
Confidence 9999988643322100 00 011245678899998888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++.++.+.|+++++ +.|+|++.|++ .++.+++|++++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~~-~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 134 -LSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--GRSIILTTHSM-DEAEALCDRIAIMSDGK 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--CCEEEEEcCCH-HHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999865 46767666654 47778999999999999
Q ss_pred EEEecChhHH
Q 000628 422 IVYQGPRDNV 431 (1383)
Q Consensus 422 iv~~G~~~~~ 431 (1383)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 222
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-35 Score=330.69 Aligned_cols=206 Identities=28% Similarity=0.401 Sum_probs=172.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 45999999999999999999999999999999999999887 8999999998764322 45799999999999999
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc--cccccccCc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI--CADTMVGDE 338 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 338 (1383)
||+||+.+..+..+... ++ ....++.+++.+||++ ..++.+.+
T Consensus 91 tv~e~l~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~l~l~~~~~~~~~~~~- 135 (242)
T cd03295 91 TVEENIALVPKLLKWPK--------------------EK--------------IRERADELLALVGLDPAEFADRYPHE- 135 (242)
T ss_pred cHHHHHHHHHHHcCCCH--------------------HH--------------HHHHHHHHHHHcCCCcHHHHhcChhh-
Confidence 99999987543221100 00 0112456788899985 56666655
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|+
T Consensus 136 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~-~~~~~~~d~i~~l~ 210 (242)
T cd03295 136 ----LSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDI-DEAFRLADRIAIMK 210 (242)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCH-HHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999998765467777776655 47889999999999
Q ss_pred CCeEEEecChhHHH
Q 000628 419 EGQIVYQGPRDNVL 432 (1383)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1383)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987764
No 223
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-35 Score=338.80 Aligned_cols=206 Identities=22% Similarity=0.325 Sum_probs=170.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-------CCcceEEEecCCCC-
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDL- 255 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~~- 255 (1383)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999987 99999999987531 12357999999862
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-cccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 334 (1383)
.+...||+||+.|+.+..+.. .. + ....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------EE----------D--------------AKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHCCCChhhhhCC
Confidence 333579999999864322110 00 0 012356788999997 567777
Q ss_pred ccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
+.+ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++.|+ ..++.+++|+|
T Consensus 143 ~~~-----LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd-~~~~~~~~drv 216 (290)
T PRK13634 143 PFE-----LSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHS-MEDAARYADQI 216 (290)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEE
Confidence 766 999999999999999999999999999999999999999999999977557777777655 45788999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000628 415 ILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1383)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIF 234 (290)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999998874
No 224
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.2e-35 Score=330.10 Aligned_cols=203 Identities=26% Similarity=0.338 Sum_probs=169.5
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh----cccceEEEEccCCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE----TFARVSGYCEQNDIHSPYV 955 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~l 955 (1383)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++.+
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENL 92 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCC
Confidence 469999999999999999999999999999999999765 3479999999875321 1235699999999999999
Q ss_pred CHHHHHHHHHHhhcC-----CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000628 956 TVYESLLYSAWLRLS-----SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1383)
Q Consensus 956 Tv~E~l~f~~~l~~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1383)
||+||+.+....... .....+..++.++++++.+++.+..+.. ++.||||||||++|||+|+.+|++|+|
T Consensus 93 tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Ge~qrv~laral~~~p~~lll 167 (242)
T TIGR03411 93 TVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRL-----AGLLSHGQKQWLEIGMLLMQDPKLLLL 167 (242)
T ss_pred CHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 999999885431100 0011233445689999999998776665 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|.+ |++++.|+.
T Consensus 168 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~~~~~~~~ 226 (242)
T TIGR03411 168 DEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GSVLAEGSL 226 (242)
T ss_pred cCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEeeCCH
Confidence 999999999999999999999875 799999999975 56678999999985 888888875
No 225
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.5e-35 Score=338.25 Aligned_cols=236 Identities=25% Similarity=0.401 Sum_probs=198.4
Q ss_pred hhcCCCCCccEEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHhhhccccCCCcccceeeeeeEEEEeCCeEEEEEcCC
Q 000628 127 DRVGIEIPKIEVRYDHLSVEGDVHVGTRALPTLLNVALNMLESALGLLHLVPSKKRSVRILKDVSGIVKPSRMTLLLGPP 206 (1383)
Q Consensus 127 ~~~~~~~p~i~v~~~~l~v~~~~~~~~~~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~ 206 (1383)
+++.++-|+-.+..|++++- +...++++|+|+||.+.+|+-++|+|||
T Consensus 324 ~~m~LP~P~g~L~Ve~l~~~--------------------------------PPg~~~pil~~isF~l~~G~~lgIIGPS 371 (580)
T COG4618 324 ERMPLPAPQGALSVERLTAA--------------------------------PPGQKKPILKGISFALQAGEALGIIGPS 371 (580)
T ss_pred CCCCCCCCCceeeEeeeeec--------------------------------CCCCCCcceecceeEecCCceEEEECCC
Confidence 45667778888888888872 1123467999999999999999999999
Q ss_pred CCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCc---ceEEEecCCCCCCCCCCHHHHHHHhhhccCCCchhhHHH
Q 000628 207 GAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ---RTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLA 283 (1383)
Q Consensus 207 GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~ 283 (1383)
|||||||.++|.|..+|. +|.|.+||.+++.+... +.+||.||+-.+|+ -||.|||. |+
T Consensus 372 gSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa---Rf----------- 433 (580)
T COG4618 372 GSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA---RF----------- 433 (580)
T ss_pred CccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH---hc-----------
Confidence 999999999999999987 99999999999877653 78999999988886 59999994 21
Q ss_pred HhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHHHHHHHHHHHHhcCCCE
Q 000628 284 ELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANV 363 (1383)
Q Consensus 284 ~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~i 363 (1383)
.++.|.+.+.+|+..++.+ |. ++.|++.+||.||+ .+.+||||||||+++|||++++|.+
T Consensus 434 -----------~~~~d~~kIieAA~lAgvH-----el---Il~lP~GYdT~iG~-~G~~LSgGQRQRIaLARAlYG~P~l 493 (580)
T COG4618 434 -----------GEEADPEKVIEAARLAGVH-----EL---ILRLPQGYDTRIGE-GGATLSGGQRQRIALARALYGDPFL 493 (580)
T ss_pred -----------cccCCHHHHHHHHHHcChH-----HH---HHhCcCCccCccCC-CCCCCCchHHHHHHHHHHHcCCCcE
Confidence 1234445566666665532 33 45699999999997 4677999999999999999999999
Q ss_pred eEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHHHHH
Q 000628 364 LYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVLEFF 435 (1383)
Q Consensus 364 llLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G~~~~~~~~f 435 (1383)
++||||-|.||+.....+.+.|.+... .|.|+|+..|.| .+...+|+|++|++|++-.+|+++|++...
T Consensus 494 vVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvviaHRP--s~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 494 VVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVIAHRP--SALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEEecCH--HHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 999999999999999999999998866 477777777655 689999999999999999999999998754
No 226
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=334.01 Aligned_cols=220 Identities=29% Similarity=0.381 Sum_probs=179.0
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 932 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~ 932 (1383)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 367778776542 346999999999999999999999999999999999976532 136999999986
Q ss_pred CCh--------hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcC-----CCCcHHHHHHHHHHHHHHcCCcccccccc
Q 000628 933 KNQ--------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-----SDVDTKKRKMFVDEVMELVELKSLNDSMV 999 (1383)
Q Consensus 933 ~~~--------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~~ 999 (1383)
... ...++.++|++|++.+++.+||+||+.+......+ .....++.+..++++++.+++.+..++.
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~- 149 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQR- 149 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCC-
Confidence 532 22356799999999999999999999875321000 0111233445689999999998777766
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEE
Q 000628 1000 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELL 1078 (1383)
Q Consensus 1000 g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~ 1078 (1383)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|+++
T Consensus 150 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 150 ----VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred ----ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 3479999999999999999999999999999999999999999999999754 899999999975 4678899999
Q ss_pred EEecCcEEEEecCCC
Q 000628 1079 LLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1079 ~l~~gG~~~~~g~~~ 1093 (1383)
+|.+ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 7899998864
No 227
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-35 Score=336.22 Aligned_cols=215 Identities=26% Similarity=0.319 Sum_probs=179.3
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++. ..+.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 678888765421 124599999999999999999999999999999999997653 4899999998764
Q ss_pred h---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 935 Q---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
. ...++.+||++|++. .++..||.||+.+..... ....++.++.++++++.++|.+..++.+ ..||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G 144 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGG 144 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHH
Confidence 3 234567999999974 667789999998865432 2234445567899999999988777764 479999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
||||++||++|+.+|+||||||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..+|++++|.+ |++++.
T Consensus 145 ~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~~ 221 (279)
T PRK13635 145 QKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILEE 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999876 899999999975 34 46999999985 899999
Q ss_pred cCCC
Q 000628 1090 GPLG 1093 (1383)
Q Consensus 1090 g~~~ 1093 (1383)
|+..
T Consensus 222 g~~~ 225 (279)
T PRK13635 222 GTPE 225 (279)
T ss_pred CCHH
Confidence 9853
No 228
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3e-35 Score=332.29 Aligned_cols=213 Identities=26% Similarity=0.350 Sum_probs=171.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 257 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999887 999999999875432 245799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+||+||+.++...... ... .+ .+..+ . +....++.+++.+||++..+..+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~--~~~---~~------~~~~~-~--------------~~~~~~~~~l~~~~l~~~~~~~~~~ 145 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKP--TWR---SL------LGRFS-E--------------EDKERALSALERVGLADKAYQRADQ 145 (243)
T ss_pred ccccHHHHHhhccccccc--chh---hh------hcccc-H--------------HHHHHHHHHHHHcCcHhhhcCCccc
Confidence 999999999875321000 000 00 00000 0 0012345678899998877777765
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.++||++++|
T Consensus 146 -----LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~-~~~~~~~d~v~~l 219 (243)
T TIGR02315 146 -----LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQV-DLAKKYADRIVGL 219 (243)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCeEEEE
Confidence 9999999999999999999999999999999999999999999998765567777776654 4778899999999
Q ss_pred cCCeEEEecChhHH
Q 000628 418 SEGQIVYQGPRDNV 431 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~ 431 (1383)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998775
No 229
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=335.60 Aligned_cols=213 Identities=24% Similarity=0.358 Sum_probs=175.4
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 45677765442 2459999999999999999999999999999999999765 34799999998753
Q ss_pred h-----hcccceEEEEccCCCC-CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000628 935 Q-----ETFARVSGYCEQNDIH-SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 935 ~-----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1383)
. ...++.++|++|++.. +...|+.||+.+..... ....++..+.++++++.+++.+..++. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 2345679999999753 34568999998764332 223334445688999999998777765 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999976 56678999999985 89999
Q ss_pred ecCC
Q 000628 1089 AGPL 1092 (1383)
Q Consensus 1089 ~g~~ 1092 (1383)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 8875
No 230
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=331.52 Aligned_cols=217 Identities=21% Similarity=0.299 Sum_probs=177.1
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1383)
.++++|+++.++ ++.+|+|||++|++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 367788876542 246999999999999999999999999999999999975421 2489999999
Q ss_pred ccCC-----hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+.. ....++.++|++|++.+++.+||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 8753 12345679999999999999999999987654321 1123344556889999999842 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999999864 799999999975 5677899999997
Q ss_pred -----cCcEEEEecCC
Q 000628 1082 -----RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 -----~gG~~~~~g~~ 1092 (1383)
+.|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 25899999875
No 231
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=5.3e-35 Score=325.72 Aligned_cols=203 Identities=25% Similarity=0.394 Sum_probs=168.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 36999999999999999999999999999999999999987 8999999998765432 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHc-CCcccccccccCc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKIL-GLDICADTMVGDE 338 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 338 (1383)
+||+||+.+.....+. .+ ....++.+++.+ ++++..++.+++
T Consensus 90 ~t~~~~l~~~~~~~~~----------------------~~--------------~~~~~~~~l~~~~~l~~~~~~~~~~- 132 (222)
T cd03224 90 LTVEENLLLGAYARRR----------------------AK--------------RKARLERVYELFPRLKERRKQLAGT- 132 (222)
T ss_pred CcHHHHHHHHhhhcCc----------------------hh--------------HHHHHHHHHHHHHhhhhhhhCchhh-
Confidence 9999999886432110 00 001133456666 477667777766
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|+ ..++.+++|+|++|+
T Consensus 133 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~-~~~~~~~~d~i~~l~ 206 (222)
T cd03224 133 ----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-EGVTILLVEQN-ARFALEIADRAYVLE 206 (222)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHhccEEEEee
Confidence 999999999999999999999999999999999999999999999876 46677777655 457889999999999
Q ss_pred CCeEEEecChhHHH
Q 000628 419 EGQIVYQGPRDNVL 432 (1383)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1383)
+|++++.|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987753
No 232
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-35 Score=324.12 Aligned_cols=194 Identities=26% Similarity=0.355 Sum_probs=163.4
Q ss_pred ceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-hcccceEEEEccCCCCCCCCCHHHHHHH
Q 000628 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYESLLY 963 (1383)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f 963 (1383)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||+||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999765 347999999987532 1234679999999999999999999987
Q ss_pred HHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHH
Q 000628 964 SAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1043 (1383)
Q Consensus 964 ~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1043 (1383)
....+. .. .+..++.++++++.++|.+..++. +..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRL-----PGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 123345688999999998777766 3579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1044 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1044 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
.+++.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999999754 899999999975 56678999999985 7877653
No 233
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.3e-35 Score=345.70 Aligned_cols=204 Identities=22% Similarity=0.324 Sum_probs=175.3
Q ss_pred ccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc----cCC---hhc---cc-ceEEEEc
Q 000628 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY----PKN---QET---FA-RVSGYCE 946 (1383)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~----~~~---~~~---~~-~~~gyv~ 946 (1383)
+...+|+|+||+|++||+++|+|+||||||||+++|+|... +..|+|.++|. +.. ... ++ +.++||+
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 45679999999999999999999999999999999999765 34799999995 221 111 22 5799999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000628 947 QNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPS 1026 (1383)
Q Consensus 947 Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~ 1026 (1383)
|++.++|.+||+||+.|....+ .....+..+.++++++.++|.+..+..+ ..||||||||++|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999875443 2334556677899999999988877764 4799999999999999999999
Q ss_pred CceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1027 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1027 illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|.+ |+++..|+..
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999999765 999999999976 56788999999985 8999999864
No 234
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.8e-35 Score=326.99 Aligned_cols=195 Identities=26% Similarity=0.387 Sum_probs=164.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-------CcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~~~~ 256 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999887 999999999876533 13579999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccccccccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1383)
++.+||+||+.++....+... . + ....++.+++.+||++..++.++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 139 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------K----------E--------------RRERAEELLERVGLGDRLNHYPS 139 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------H----------H--------------HHHHHHHHHHHcCCchhhhcChh
Confidence 999999999988643322100 0 0 01134668889999888888777
Q ss_pred CcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEE
Q 000628 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1383)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~l 416 (1383)
+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++. .||++++
T Consensus 140 ~-----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~-~~d~v~~ 212 (218)
T cd03255 140 E-----LSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LAE-YADRIIE 212 (218)
T ss_pred h-----cCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHh-hhcEEEE
Confidence 6 99999999999999999999999999999999999999999999987644678888777654 554 9999999
Q ss_pred EcCCeE
Q 000628 417 LSEGQI 422 (1383)
Q Consensus 417 L~~G~i 422 (1383)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 235
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=332.45 Aligned_cols=217 Identities=27% Similarity=0.366 Sum_probs=177.6
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.+ +++.+|+|||+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~-------------~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGY-------------GTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEE-------------CCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 5667776544 23469999999999999999999999999999999999755 34799999998653
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
. ...++.++|++|++.+++.+|+.||+.+....... .....+...+.++++++.+++.+..++. +..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----LTDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCHH
Confidence 2 23456799999999888889999999875211000 0111123345678999999998777766 4579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+++..|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999999877999999999986 57788999999985 7898888
Q ss_pred CCC
Q 000628 1091 PLG 1093 (1383)
Q Consensus 1091 ~~~ 1093 (1383)
+.+
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 754
No 236
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-35 Score=302.73 Aligned_cols=208 Identities=28% Similarity=0.437 Sum_probs=172.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCc---ceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQ---RTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~~~~~~~l 260 (1383)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++.+||++++.+.+. +.-+.++|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45899999999999999999999999999999999999998 99999999999887653 5678999998887778
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||+|-+.++..-.+.+.. +.+ ...+++..|...++.+.+....-
T Consensus 91 tv~eVV~mGr~p~~~g~~-----------------~~e---------------~~~i~~~ala~~d~~~la~R~y~---- 134 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE-----------------PEE---------------DERIAAQALAATDLSGLAGRDYR---- 134 (259)
T ss_pred EHHHHHHhcccccccCCC-----------------chh---------------hHHHHHHHHHHcChhhhhccchh----
Confidence 999999998654332211 100 11235567777788777666554
Q ss_pred CCCChHHHHHHHHHHHHhc------CCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 341 RGISGGQKKRVTTGEMLVG------TANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~------~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
.|||||||||.+||.|+. ++++||||||||+||...+..+++..|++++. +. .++.++|+.+-+..++|+|
T Consensus 135 -~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g~-~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 135 -TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-GG-AVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred -hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-CC-cEEEEEccchHHHHhhhee
Confidence 499999999999999974 44699999999999999999999999999985 44 4555566777888999999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000628 415 ILLSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~~ 433 (1383)
++|++||++..|++++++.
T Consensus 212 vll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 212 VLLHQGRVIASGSPQDVLT 230 (259)
T ss_pred eeeeCCeEeecCCHHHhcC
Confidence 9999999999999998863
No 237
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-35 Score=334.87 Aligned_cols=204 Identities=26% Similarity=0.329 Sum_probs=170.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCC-CCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL-HHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~-~~~~ 259 (1383)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFS 94 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhcc
Confidence 35999999999999999999999999999999999999987 9999999998865332 357999999963 4556
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
.||+||+.|+....+.. +. .....++.+++.+||++..++.+.+
T Consensus 95 ~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~~-- 138 (274)
T PRK13647 95 STVWDDVAFGPVNMGLD----------KD------------------------EVERRVEEALKAVRMWDFRDKPPYH-- 138 (274)
T ss_pred CcHHHHHHhhHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCHHHhcCChhh--
Confidence 89999998853321110 00 0012356788999999888888876
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.|++++.|+ ..++.++||+|++|++
T Consensus 139 ---LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-g~tili~tH~-~~~~~~~~d~i~~l~~ 213 (274)
T PRK13647 139 ---LSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ-GKTVIVATHD-VDLAAEWADQVIVLKE 213 (274)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCC-HHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998764 6777777655 4577789999999999
Q ss_pred CeEEEecChhHH
Q 000628 420 GQIVYQGPRDNV 431 (1383)
Q Consensus 420 G~iv~~G~~~~~ 431 (1383)
|++++.|+++++
T Consensus 214 G~i~~~g~~~~~ 225 (274)
T PRK13647 214 GRVLAEGDKSLL 225 (274)
T ss_pred CEEEEECCHHHh
Confidence 999999998654
No 238
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-35 Score=333.75 Aligned_cols=218 Identities=29% Similarity=0.388 Sum_probs=178.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 477888876542 2469999999999999999999999999999999999765 3479999999765
Q ss_pred C---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 934 N---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 934 ~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
. ....++.++|++|++.+++.+|+.||+.+....... ........++.++++++.+++.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 3 233456799999998888999999999875321110 00111223456889999999987767664 47999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
||||||+||++|+.+|+||||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999976 56788999999985 88998
Q ss_pred ecCCC
Q 000628 1089 AGPLG 1093 (1383)
Q Consensus 1089 ~g~~~ 1093 (1383)
.|+..
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 88753
No 239
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.6e-35 Score=327.90 Aligned_cols=199 Identities=28% Similarity=0.348 Sum_probs=165.8
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh----cccceEEEEccCCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE----TFARVSGYCEQNDIHSPYV 955 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~l 955 (1383)
+.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 469999999999999999999999999999999999765 3479999999875321 1245799999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000628 956 TVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVE-LKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1383)
Q Consensus 956 Tv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1383)
|+.||+.+....+. .. ..+.++++++.++ +.+..++. +..||||||||++||++|+.+|++|+|||||
T Consensus 91 tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlDEPt 159 (230)
T TIGR03410 91 TVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLDEPT 159 (230)
T ss_pred cHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 99999987654321 11 1223567777776 45555555 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|+++++.+ |++++.|+..
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 217 (230)
T TIGR03410 160 EGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVASGAGD 217 (230)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999998864 899999999975 56668999999975 8999998864
No 240
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.5e-35 Score=293.57 Aligned_cols=200 Identities=29% Similarity=0.431 Sum_probs=172.4
Q ss_pred ccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---h---cc-cceEEEEccC
Q 000628 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---E---TF-ARVSGYCEQN 948 (1383)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~---~~-~~~~gyv~Q~ 948 (1383)
......||++|++.|++||-+||+|||||||||||-+|+|...+ .+|+|.+.|++... + .+ .+.+|+|+|.
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQS 96 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQS 96 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEe
Confidence 44567899999999999999999999999999999999998763 48999999987643 1 23 3679999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 000628 949 DIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII 1028 (1383)
Q Consensus 949 ~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~il 1028 (1383)
..+.|++|..||+.....++.... .+......+.|+.+||.+..+.. +.+|||||+|||+||||++..|+||
T Consensus 97 F~Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vL 168 (228)
T COG4181 97 FHLIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVL 168 (228)
T ss_pred eeccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEE
Confidence 999999999999999988875332 22334577899999998877776 4589999999999999999999999
Q ss_pred eeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1029 FMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1029 lLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
|.||||-+||..+...|.+++-.+.. .|.|.|++||||. +...|||.+-|.. |+++.
T Consensus 169 fADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 169 FADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred eccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 99999999999999999999988864 5999999999975 6789999999975 77764
No 241
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=6.4e-35 Score=344.24 Aligned_cols=208 Identities=23% Similarity=0.301 Sum_probs=176.8
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCe----eCCCCCC-------cceEEEe
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGH----ELNEFVP-------QRTCAYI 250 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~----~~~~~~~-------~~~~~yv 250 (1383)
....+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999987 999999996 3332211 2479999
Q ss_pred cCCCCCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccc
Q 000628 251 SQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC 330 (1383)
Q Consensus 251 ~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 330 (1383)
+|++.+++.+||+||+.|+....+... .+ ....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------~~------------------------~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------AE------------------------RRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCchh
Confidence 999999999999999998754332110 00 01235668899999988
Q ss_pred ccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhh
Q 000628 331 ADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL 410 (1383)
Q Consensus 331 ~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~ 410 (1383)
.|+.+++ |||||||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.+..++|+|++.|+ ..++.++
T Consensus 158 ~~~~~~~-----LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHd-l~e~~~l 231 (382)
T TIGR03415 158 ADKKPGE-----LSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHD-LDEALKI 231 (382)
T ss_pred hcCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHh
Confidence 8888877 999999999999999999999999999999999999999999999977667777777655 5588899
Q ss_pred cCeEEEEcCCeEEEecChhHHH
Q 000628 411 FDDIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 411 ~D~i~lL~~G~iv~~G~~~~~~ 432 (1383)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 242
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.5e-33 Score=362.12 Aligned_cols=123 Identities=24% Similarity=0.318 Sum_probs=102.7
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CCce
Q 000628 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELVANP---SIIF 1029 (1383)
Q Consensus 954 ~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p---~ill 1029 (1383)
.+||.|++.|...+. . .....+.++.+||... .+.. +..||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378999988865432 1 1124678999999763 4554 3579999999999999999999 9999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe-----cCcEEEEecCC
Q 000628 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGRVIYAGPL 1092 (1383)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gG~~~~~g~~ 1092 (1383)
|||||+|||+.....+++.|+++.++|.|||+++|+++ ....+|+++.|. ++|++++.|++
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 456899999994 57999999985
No 243
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=335.81 Aligned_cols=223 Identities=25% Similarity=0.362 Sum_probs=178.5
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-------CCcceEEEecCCC-CC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHD-LH 256 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~-~~ 256 (1383)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999987 99999999987521 1246799999986 23
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMV 335 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 335 (1383)
+...||.||+.|+....+.. +. + ....++.+++.+||. +..++.+
T Consensus 97 l~~~tv~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~L~~~~~~~~~ 142 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIP----------KE----------K--------------AEKIAAEKLEMVGLADEFWEKSP 142 (288)
T ss_pred cccchHHHHHHhHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCChhhccCCc
Confidence 33469999999875432210 00 0 011356678889996 4566666
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
.+ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++.|++ .++.++||+|+
T Consensus 143 ~~-----LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~vtHd~-~~~~~~~dri~ 215 (288)
T PRK13643 143 FE-----LSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-SGQTVVLVTHLM-DDVADYADYVY 215 (288)
T ss_pred cc-----CCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCH-HHHHHhCCEEE
Confidence 55 999999999999999999999999999999999999999999999875 367777776654 57889999999
Q ss_pred EEcCCeEEEecChhHHHH---HHHhcCCCCCCCCChhHH
Q 000628 416 LLSEGQIVYQGPRDNVLE---FFEHMGFKCPERKGVADF 451 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~~---~f~~lGf~~p~~~~~adf 451 (1383)
+|++|+++++|+++++.+ +++..|+.+|.....++.
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 254 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQ 254 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHH
Confidence 999999999999998743 345667776665444433
No 244
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-35 Score=333.61 Aligned_cols=218 Identities=23% Similarity=0.301 Sum_probs=179.7
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 577888877652 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
.. ...++.++|++|++.+++..|++||+.+...-... .....+..++.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 32 23456799999999998999999999875211100 0001123345688999999998776766 457999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ ++.+.+|++++|.+ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 57788999999975 88999
Q ss_pred ecCCC
Q 000628 1089 AGPLG 1093 (1383)
Q Consensus 1089 ~g~~~ 1093 (1383)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 98864
No 245
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=8.3e-35 Score=323.14 Aligned_cols=198 Identities=31% Similarity=0.451 Sum_probs=166.9
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--CcceEEEecCCCCCCCCCCH
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lTV 262 (1383)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999887 999999999875421 24679999999999999999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.+.....+.. . . +....++.+++.+||++..++.+++
T Consensus 96 ~e~l~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------G----------D--------------ELTARLEELADRLGMEELLDRRVGG----- 136 (218)
T ss_pred HHHHHHHHHHcCCC----------H----------H--------------HHHHHHHHHHHHcCCHHHHhhhhhh-----
Confidence 99998753322110 0 0 0012356688899999888888776
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~~-~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LGKCILFSTHIM-QEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865 367777776654 578899999999999999
Q ss_pred EEec
Q 000628 423 VYQG 426 (1383)
Q Consensus 423 v~~G 426 (1383)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 246
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=5.6e-35 Score=326.53 Aligned_cols=204 Identities=23% Similarity=0.343 Sum_probs=166.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc-----CCCCCceeEEEECCeeCCCCC-----CcceEEEecCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL-----GKDLRASGKITYCGHELNEFV-----PQRTCAYISQH 253 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~ 253 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|. +|+|.++|+++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 36999999999999999999999999999999999999 776 899999999875432 24579999999
Q ss_pred CCCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccc
Q 000628 254 DLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADT 333 (1383)
Q Consensus 254 ~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 333 (1383)
+.++ .+||+||+.++.+..+... .+ +....++.+++.+||++..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~--------------------~~-------------~~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKL--------------------KE-------------ELDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCc--------------------HH-------------HHHHHHHHHHHHcCCChHHhc
Confidence 9888 7999999988643221100 00 001234567889999876666
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+. .+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .|+|++.|+ ..++.++||+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~tii~~sH~-~~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE--YTIVIVTHN-MQQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC--cEEEEEecc-HHHHHHhCCE
Confidence 530 1349999999999999999999999999999999999999999999998763 666666655 4578889999
Q ss_pred EEEEcCCeEEEecChhH
Q 000628 414 IILLSEGQIVYQGPRDN 430 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~ 430 (1383)
+++|++|++++.|++++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998765
No 247
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-35 Score=323.08 Aligned_cols=198 Identities=26% Similarity=0.368 Sum_probs=166.4
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 263 (1383)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 45999999999999999999999999999999999999887 9999999987754 2356799999999999999999
Q ss_pred HHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCC
Q 000628 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1383)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1383)
||+.+.....+... .+ ....++.+++.+||++..++.+++ |
T Consensus 89 e~l~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK--------------------EE--------------ARRRIDEWLERLELSEYANKRVEE-----L 129 (210)
T ss_pred HHHHHHHHHcCCCh--------------------HH--------------HHHHHHHHHHHcCChHHHhCcHhh-----C
Confidence 99987543322100 00 011346678899998888887766 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEE
Q 000628 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIV 423 (1383)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv 423 (1383)
||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++. +.|++++.|+ ..++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~-~~tii~~sH~-~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARA-GKTVILSTHQ-MELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEECCC-HHHHHHhhhEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999998753 6677666655 45788899999999999998
Q ss_pred Eec
Q 000628 424 YQG 426 (1383)
Q Consensus 424 ~~G 426 (1383)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 248
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=330.74 Aligned_cols=219 Identities=21% Similarity=0.283 Sum_probs=177.5
Q ss_pred cCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--C-ceEEEEE
Q 000628 850 FQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDI 926 (1383)
Q Consensus 850 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i 926 (1383)
.....++++|+++.++ +..+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|
T Consensus 9 ~~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i 75 (260)
T PRK10744 9 TAPSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEI 75 (260)
T ss_pred CCCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEE
Confidence 3445688899887652 2359999999999999999999999999999999999753 1 1357999
Q ss_pred EEcCccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccc
Q 000628 927 KISGYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDS 997 (1383)
Q Consensus 927 ~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~ 997 (1383)
.++|.+... ..+++.++|++|++.+++ .||+||+.+...... ....++.+++++++++.+++.+ ..+.
T Consensus 76 ~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 76 LLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred EECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhc
Confidence 999987531 234677999999988877 899999987653221 1233344566889999999843 2333
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceE
Q 000628 998 MVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1077 (1383)
Q Consensus 998 ~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~ 1077 (1383)
. +..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.+|++
T Consensus 153 ~-----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i 225 (260)
T PRK10744 153 S-----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYT 225 (260)
T ss_pred C-----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEE
Confidence 3 45799999999999999999999999999999999999999999999996 4789999999975 566789999
Q ss_pred EEEecCcEEEEecCC
Q 000628 1078 LLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1078 ~~l~~gG~~~~~g~~ 1092 (1383)
++|.+ |+++..|+.
T Consensus 226 ~~l~~-G~i~~~g~~ 239 (260)
T PRK10744 226 AFMYL-GELIEFGNT 239 (260)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 899988874
No 249
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-35 Score=335.10 Aligned_cols=217 Identities=24% Similarity=0.353 Sum_probs=174.8
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.++.. ....+.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~--------~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAG--------TPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCC--------CccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 5677877655310 0001359999999999999999999999999999999999765 34799999998753
Q ss_pred h-------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000628 935 Q-------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1383)
Q Consensus 935 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1383)
. ...++.++|++|++ .+++ .||+||+.+..... ....++..+.++++++.++|. ...+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23456799999996 3444 69999998764322 122334455678999999996 345554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCc
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1084 (1383)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999975 56678999999985 8
Q ss_pred EEEEecCC
Q 000628 1085 RVIYAGPL 1092 (1383)
Q Consensus 1085 ~~~~~g~~ 1092 (1383)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 89888875
No 250
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.3e-34 Score=323.74 Aligned_cols=213 Identities=25% Similarity=0.367 Sum_probs=173.8
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++.. .....+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 47788887655310 001359999999999999999999999999999999999765 3479999999875
Q ss_pred Chh---c---c-cceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000628 934 NQE---T---F-ARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1383)
Q Consensus 934 ~~~---~---~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1383)
... . . ++.++|++|++.+++.+||.||+.+....+ .....+..+++.++++.+++.+..+.. +..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHL-----PAQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCC-----hhh
Confidence 321 1 1 257999999999999999999998765432 122334456789999999998776665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ .+ +.+|++++|.+ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999754 899999999976 34 66999999975 77
Q ss_pred EEE
Q 000628 1086 VIY 1088 (1383)
Q Consensus 1086 ~~~ 1088 (1383)
+++
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 764
No 251
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=338.77 Aligned_cols=226 Identities=23% Similarity=0.261 Sum_probs=182.2
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.+...... . ...+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~--~-~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGL--F-KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCc--c-ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 47888888766421100 0 001235799999999999999999999999999999999997653 479999999876
Q ss_pred Ch------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000628 934 NQ------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGV 1004 (1383)
Q Consensus 934 ~~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~ 1004 (1383)
.. ..+++.++||+|++ .+.|.+||.+++.+..... ......+.++++.++++.+||.+ ..+.. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 32 13456799999998 5889999999987754332 12334556677899999999963 44554 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecC
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1083 (1383)
..||||||||++|||||+.+|++||+||||+|||..++..|+++|+++.++ |.|||++||+++ .+...+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 589999999999999999999999999999999999999999999999764 999999999975 45568999999985
Q ss_pred cEEEEecCCC
Q 000628 1084 GRVIYAGPLG 1093 (1383)
Q Consensus 1084 G~~~~~g~~~ 1093 (1383)
|++++.|+..
T Consensus 231 G~ive~g~~~ 240 (327)
T PRK11308 231 GRCVEKGTKE 240 (327)
T ss_pred CEEEEECCHH
Confidence 8999999853
No 252
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-35 Score=333.40 Aligned_cols=215 Identities=26% Similarity=0.347 Sum_probs=176.9
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.+. +++.+|+|||++|++||++||+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 45677776542 12359999999999999999999999999999999999765 34799999998753
Q ss_pred h-----hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000628 935 Q-----ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 935 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1383)
. ...++.++|++|++. .+...||.||+.+..... ....++..+.+.++++.++|.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 124567999999973 334579999998754221 2233444566889999999988877764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|.|||+++|+++ ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999975 56678999999985 89999
Q ss_pred ecCCC
Q 000628 1089 AGPLG 1093 (1383)
Q Consensus 1089 ~g~~~ 1093 (1383)
.|+..
T Consensus 218 ~g~~~ 222 (275)
T PRK13639 218 EGTPK 222 (275)
T ss_pred eCCHH
Confidence 88753
No 253
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.5e-35 Score=322.00 Aligned_cols=192 Identities=28% Similarity=0.342 Sum_probs=161.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCC-CCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDL-HHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~-~~~~lTV 262 (1383)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 46999999999999999999999999999999999999987 9999999998754333467999999974 3456899
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.+.....+ . ....++.+++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~----------------------~----------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (205)
T cd03226 90 REELLLGLKELD----------------------A----------------GNEQAETVLKDLDLYALKERHPLS----- 126 (205)
T ss_pred HHHHhhhhhhcC----------------------c----------------cHHHHHHHHHHcCCchhcCCCchh-----
Confidence 999987532110 0 001245678899999888888876
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++.|++ .++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~sH~~-~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QGKAVIVITHDY-EFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999875 367777776654 477789999999999987
Q ss_pred E
Q 000628 423 V 423 (1383)
Q Consensus 423 v 423 (1383)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 254
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=5.2e-35 Score=326.97 Aligned_cols=198 Identities=25% Similarity=0.364 Sum_probs=166.3
Q ss_pred eeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHH
Q 000628 883 LHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLL 962 (1383)
Q Consensus 883 L~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 962 (1383)
|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999765 34799999998764321 12489999999999999999998
Q ss_pred HHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHH
Q 000628 963 YSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1042 (1383)
Q Consensus 963 f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~ 1042 (1383)
+....... ....++.++.+.++++.++|.+..++. +..||||||||++||++|+.+|++|||||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKR-----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 223344455688999999998777766 357999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1043 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1043 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998765 899999999976 56778999999985 888887764
No 255
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=338.07 Aligned_cols=221 Identities=19% Similarity=0.259 Sum_probs=178.6
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC-c-eEEEEEEEcCcc
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YIEGDIKISGYP 932 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-g-~~~G~i~i~g~~ 932 (1383)
++++|++..++.. .+...+|+||||+|++||++||+|+||||||||+++|+|...+ + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6778887665321 1124699999999999999999999999999999999997542 2 357999999987
Q ss_pred CCh---hcc----cceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc---cccccc
Q 000628 933 KNQ---ETF----ARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL---NDSMVG 1000 (1383)
Q Consensus 933 ~~~---~~~----~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~~g 1000 (1383)
+.. ... ++.++|++|++ .+.|.+||.+++........ ....++.++.+.++++.++|.+. .+..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 642 111 23699999998 47889999998876543321 22345556778999999999753 3333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEE
Q 000628 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLL 1079 (1383)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~ 1079 (1383)
+..|||||||||+||+||+.+|++||+||||+|||+.++..+++.|+++.+ .|.|||++||+++ .+.+.+|++++
T Consensus 151 ---p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~v 226 (326)
T PRK11022 151 ---PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIV 226 (326)
T ss_pred ---chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 458999999999999999999999999999999999999999999999976 4999999999976 46678999999
Q ss_pred EecCcEEEEecCCC
Q 000628 1080 LKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1080 l~~gG~~~~~g~~~ 1093 (1383)
|.+ |++++.|+..
T Consensus 227 m~~-G~ive~g~~~ 239 (326)
T PRK11022 227 MYA-GQVVETGKAH 239 (326)
T ss_pred EEC-CEEEEECCHH
Confidence 974 8999999853
No 256
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1e-34 Score=331.59 Aligned_cols=223 Identities=22% Similarity=0.318 Sum_probs=177.3
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.++.....+ ..+++.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 56778776653110000 0113569999999999999999999999999999999999765 34799999998754
Q ss_pred hh------cccceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000628 935 QE------TFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1383)
Q Consensus 935 ~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1383)
.. ..++.++|++|++ .+.+.+||+||+.+...... .......++.++++++.+++. ...+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 21 1356799999997 46678999999976543211 122333455688999999995 555655 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCc
Q 000628 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1383)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1084 (1383)
.||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+.+.+|++++|.+ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999865 899999999975 56678999999985 8
Q ss_pred EEEEecCC
Q 000628 1085 RVIYAGPL 1092 (1383)
Q Consensus 1085 ~~~~~g~~ 1092 (1383)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99998885
No 257
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=325.24 Aligned_cols=201 Identities=19% Similarity=0.291 Sum_probs=167.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-------cceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~ 256 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999887 9999999998865432 2469999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccccccccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1383)
++.+||+||+.+.....+... . + ....++.+++.+||++..++.++
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~gl~~~~~~~~~ 144 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------A----------E--------------INSRALEMLAAVGLEHRANHRPS 144 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------H----------H--------------HHHHHHHHHHHcCCchhhhCChh
Confidence 999999999988643211100 0 0 01134568889999887777776
Q ss_pred CcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEE
Q 000628 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1383)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~l 416 (1383)
+ |||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++.. +|++++
T Consensus 145 ~-----LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~~~-~~~~~~ 217 (233)
T PRK11629 145 E-----LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LAKR-MSRQLE 217 (233)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHh-hCEEEE
Confidence 6 99999999999999999999999999999999999999999999987645678887777653 4544 689999
Q ss_pred EcCCeEEEecCh
Q 000628 417 LSEGQIVYQGPR 428 (1383)
Q Consensus 417 L~~G~iv~~G~~ 428 (1383)
|++|+++..|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999988764
No 258
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=328.77 Aligned_cols=221 Identities=25% Similarity=0.356 Sum_probs=175.3
Q ss_pred CcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--C-ceEEEEEEE
Q 000628 852 PLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKI 928 (1383)
Q Consensus 852 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i 928 (1383)
|..++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.+
T Consensus 4 ~~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 70 (253)
T PRK14242 4 PPKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILL 70 (253)
T ss_pred CcEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEE
Confidence 34578888887652 2359999999999999999999999999999999999632 1 124799999
Q ss_pred cCccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000628 929 SGYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG 1003 (1383)
Q Consensus 929 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 1003 (1383)
+|.+... ..+++.++|++|++.+++ .||+||+.+....+.. ...+...+.++++++.+++.+....... ..
T Consensus 71 ~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~ 146 (253)
T PRK14242 71 DGENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLH-ES 146 (253)
T ss_pred CCEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhh-CC
Confidence 9987532 234567999999998887 5999999886543211 1223344568889999998542111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecC
Q 000628 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1383)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1083 (1383)
+..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|.+
T Consensus 147 ~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~~- 223 (253)
T PRK14242 147 ALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFYM- 223 (253)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999999854 799999999975 56678999999985
Q ss_pred cEEEEecCC
Q 000628 1084 GRVIYAGPL 1092 (1383)
Q Consensus 1084 G~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 224 G~i~~~g~~ 232 (253)
T PRK14242 224 GKLIEVGPT 232 (253)
T ss_pred CEEEEeCCH
Confidence 889888874
No 259
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=7.6e-35 Score=331.30 Aligned_cols=205 Identities=31% Similarity=0.415 Sum_probs=170.6
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVT 956 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 956 (1383)
+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPLT 91 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcccCCHHHHhhheEEecccCccCCCCC
Confidence 469999999999999999999999999999999999765 347999999987532 233456999999988788899
Q ss_pred HHHHHHHHHH-hhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCC
Q 000628 957 VYESLLYSAW-LRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1035 (1383)
Q Consensus 957 v~E~l~f~~~-l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTs 1035 (1383)
|.||+.+... .+........+..+.++++++.+++.+..++. +..||||||||++||++|+.+|++++|||||+
T Consensus 92 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~ 166 (256)
T TIGR03873 92 VRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRD-----MSTLSGGERQRVHVARALAQEPKLLLLDEPTN 166 (256)
T ss_pred HHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCccc
Confidence 9999987531 11000011123345688999999998777776 34799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1036 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1036 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
|||+.+...+.+.|+++.++|.|||+++|+++ ++.+.+|++++|.+ |+++..|+..
T Consensus 167 ~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (256)
T TIGR03873 167 HLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAGPPR 222 (256)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEecCHH
Confidence 99999999999999999877899999999986 56688999999985 7899888753
No 260
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=9.7e-35 Score=326.10 Aligned_cols=201 Identities=31% Similarity=0.444 Sum_probs=168.4
Q ss_pred ccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEc-cCCCCCCC
Q 000628 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCE-QNDIHSPY 954 (1383)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~~ 954 (1383)
+.+++|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 44679999999999999999999999999999999999765 347999999976422 23456799997 55677788
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000628 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1383)
Q Consensus 955 lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1383)
+||+|++.+...++ ....++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998765432 1223344556788999999988777764 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999999765 899999999975 56778999999975 7887654
No 261
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-34 Score=317.46 Aligned_cols=196 Identities=33% Similarity=0.607 Sum_probs=162.1
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 932 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~ 932 (1383)
.++|+|++|.++.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 47899999988532 13457999999999999999999999999999999999975522 458999999987
Q ss_pred CCh--hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 933 KNQ--ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 933 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
... ...++.++|++|++.+++.+||+||+.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 235667999999999999999999998753211 1222 4579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
||||++||++|+.+|++|||||||+|||+.+++.+++.|++++++ +.|+|+++|+...++.+.+|++++|.+ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 677777666543367788999999985 788765
Q ss_pred c
Q 000628 1090 G 1090 (1383)
Q Consensus 1090 g 1090 (1383)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 262
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.5e-34 Score=330.92 Aligned_cols=207 Identities=23% Similarity=0.359 Sum_probs=172.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 257 (1383)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35899999999999999999999999999999999999887 899999999876432 135699999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+||.||+.+....... .... + ....++.+++.+||++..++.+++
T Consensus 97 ~~~tv~enl~~~~~~~~~---------~~~~----------~--------------~~~~~~~~l~~~gl~~~~~~~~~~ 143 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---------LPAP----------L--------------LHSTVMMKLEAVGLRGAAKLMPSE 143 (269)
T ss_pred CCCCHHHHHHHHHHHccC---------CCHH----------H--------------HHHHHHHHHHHcCChhhhhCChhh
Confidence 999999999875321100 0000 0 011245678899999888888876
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+ ..++.+++|+|++|
T Consensus 144 -----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~-~~~~~~~~d~v~~l 217 (269)
T PRK11831 144 -----LSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHD-VPEVLSIADHAYIV 217 (269)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecC-HHHHHHhhCEEEEE
Confidence 999999999999999999999999999999999999999999999876546777777654 45788999999999
Q ss_pred cCCeEEEecChhHHH
Q 000628 418 SEGQIVYQGPRDNVL 432 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1383)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 263
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=9.6e-35 Score=345.44 Aligned_cols=209 Identities=25% Similarity=0.406 Sum_probs=175.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
+++|+|+|+.+++||+++|+||||||||||||+|+|.++|. +|+|.++|.++..... ++.++||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999987 9999999998865432 46799999999998999
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||+||+.++..-... ++. . .. .+....++..++.+||.+..++.+.+
T Consensus 93 tv~e~v~~~~~~~~~--~~~-------------~-~~--------------~~~~~~v~~~le~vgl~~~~~~~~~~--- 139 (402)
T PRK09536 93 DVRQVVEMGRTPHRS--RFD-------------T-WT--------------ETDRAAVERAMERTGVAQFADRPVTS--- 139 (402)
T ss_pred CHHHHHHhccchhcc--ccc-------------C-CC--------------HHHHHHHHHHHHHcCCchhhcCChhh---
Confidence 999999885321100 000 0 00 00112467789999999888888876
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.| ...++.++||++++|++|
T Consensus 140 --LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g~TIIivsH-dl~~~~~~adrii~l~~G 215 (402)
T PRK09536 140 --LSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DGKTAVAAIH-DLDLAARYCDELVLLADG 215 (402)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEEC-CHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999986 4677776655 556888999999999999
Q ss_pred eEEEecChhHHH
Q 000628 421 QIVYQGPRDNVL 432 (1383)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1383)
++++.|++++++
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999999864
No 264
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=7.5e-35 Score=321.04 Aligned_cols=195 Identities=29% Similarity=0.420 Sum_probs=165.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-CCcceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-VPQRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-~~~~~~~yv~Q~~~~~~~lTV 262 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999999887 99999999876532 124579999999999999999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.+.....+. ....++.+++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVKG----- 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHhh-----
Confidence 9999875321110 011245678889998888887776
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|+ ..++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~-~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGITVLISSHL-LSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEcCC-HHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876 46777777655 4477889999999999999
Q ss_pred EEec
Q 000628 423 VYQG 426 (1383)
Q Consensus 423 v~~G 426 (1383)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 265
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1e-34 Score=324.00 Aligned_cols=204 Identities=34% Similarity=0.514 Sum_probs=169.7
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC---CCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG---KDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGE 259 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~ 259 (1383)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3569999999999999999999999999999999999998 65 89999999987643446789999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHH-HHHHcCCcccccccccCc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDY-VLKILGLDICADTMVGDE 338 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~ 338 (1383)
+||+||+.|+....+..... ... .....+. .++.+++++..++.+++
T Consensus 96 ~tv~enl~~~~~~~~~~~~~------------------~~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~- 143 (226)
T cd03234 96 LTVRETLTYTAILRLPRKSS------------------DAI-------------RKKRVEDVLLRDLALTRIGGNLVKG- 143 (226)
T ss_pred CcHHHHHHHHHHhhcccccc------------------hHH-------------HHHHHHHHHHHhhcchhhhcccccC-
Confidence 99999999864432110000 000 0011233 77888888777777765
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +.|++++.|++..++.+++|++++|+
T Consensus 144 ----LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~-~~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 144 ----ISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARR-NRIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred ----cCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEecCCCHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999998754 67888888877668999999999999
Q ss_pred CCeEEEec
Q 000628 419 EGQIVYQG 426 (1383)
Q Consensus 419 ~G~iv~~G 426 (1383)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 266
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=327.12 Aligned_cols=219 Identities=21% Similarity=0.310 Sum_probs=173.7
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCC---CCceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~---~~g~~~G~i~i~g 930 (1383)
.++++|+++.++ .+.+|+|||+++++||+++|+||||||||||+++|+|.. .+.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467778776542 246999999999999999999999999999999999952 2112379999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1383)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+...+.++++++.+++.+....... ..+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLK-ESAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcc
Confidence 87642 234567999999988877 5999999876543311 1122344568899999998642211111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 5899999999986 56788999999975 89
Q ss_pred EEEecCC
Q 000628 1086 VIYAGPL 1092 (1383)
Q Consensus 1086 ~~~~g~~ 1092 (1383)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999875
No 267
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=332.30 Aligned_cols=215 Identities=26% Similarity=0.356 Sum_probs=178.3
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++ .+++.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~-----------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYP-----------NSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcC-----------CCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 478888876542 012469999999999999999999999999999999999765 3479999999876
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
.. ..+++.++|++|++. .++.+||+||+.+..... ....++..+.++++++.++|.+..++.+ ..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 42 235677999999974 567899999998764322 1223344556899999999988777763 57999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|+++ ++ ..+|++++|.+ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999766 599999999986 34 57999999975 88988
Q ss_pred ecCC
Q 000628 1089 AGPL 1092 (1383)
Q Consensus 1089 ~g~~ 1092 (1383)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 268
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=330.72 Aligned_cols=216 Identities=25% Similarity=0.376 Sum_probs=177.1
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCC-CCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL-HHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~-~~~~ 259 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 35899999999999999999999999999999999999987 9999999998865432 357999999973 6667
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
.||.||+.++.+..+.. . .+ ....++.+++.+||++..++.+++
T Consensus 97 ~tv~enl~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------R----------EE--------------MVERVDQALRQVGMEDFLNREPHR-- 140 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------H----------HH--------------HHHHHHHHHHHcCChhhhhCCccc--
Confidence 89999998864322110 0 00 012356788899999888888876
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++. .+|+|++|++
T Consensus 141 ---LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~~-~~d~i~~l~~ 215 (279)
T PRK13635 141 ---LSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EAA-QADRVIVMNK 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HHH-cCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998755778888877654 554 5999999999
Q ss_pred CeEEEecChhHHHH---HHHhcCCCCC
Q 000628 420 GQIVYQGPRDNVLE---FFEHMGFKCP 443 (1383)
Q Consensus 420 G~iv~~G~~~~~~~---~f~~lGf~~p 443 (1383)
|++++.|+.+++.. .+...|..+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999988753 3334444433
No 269
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-34 Score=324.09 Aligned_cols=201 Identities=27% Similarity=0.406 Sum_probs=171.6
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh-cccceEEEEccCCCCCCCCCHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVY 958 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~ 958 (1383)
+.+|+|+|++++|||+++|+|+||||||||+++|+|..++ ..|+|.++|.+.... ..++.++|++|++.+++.+|++
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 4699999999999999999999999999999999997653 479999999876431 1346799999999998899999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000628 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1383)
Q Consensus 959 E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1383)
||+.+....+ ........+.++++++.+++.+..+.. +..||+|||||++|||+|+.+|++++|||||+|||
T Consensus 91 ~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qrl~laral~~~p~llllDEP~~gLD 162 (232)
T cd03300 91 ENIAFGLRLK---KLPKAEIKERVAEALDLVQLEGYANRK-----PSQLSGGQQQRVAIARALVNEPKVLLLDEPLGALD 162 (232)
T ss_pred HHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9998765433 122334455678999999998877766 45799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1039 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 163 LKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999765 899999999975 56788999999985 889888864
No 270
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-35 Score=348.04 Aligned_cols=214 Identities=27% Similarity=0.467 Sum_probs=179.9
Q ss_pred CCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000628 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1383)
Q Consensus 851 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1383)
.+..+..+|++|.++ +++++++|+|++++||+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 355667778888664 223799999999999999999999999999999999998763 489999999
Q ss_pred ccC---ChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccc------cccC
Q 000628 931 YPK---NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDS------MVGL 1001 (1383)
Q Consensus 931 ~~~---~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~------~~g~ 1001 (1383)
.+. +...+++.++||+|+|.+++ -|++||+.++. .+.+ ++.+.++++..+|.+..+. .+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 875 45678999999999998876 49999998753 1222 2347888888888776554 3443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+.++|||||+|||++||||+.+++++++||||++||.++++.|++.|.++++ ++||+++||++ .....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl--~~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRL--EDAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcCh--HHHhcCCEEEEec
Confidence 3568999999999999999999999999999999999999999999999986 59999999996 4667899999997
Q ss_pred cCcEEEEecCCC
Q 000628 1082 RGGRVIYAGPLG 1093 (1383)
Q Consensus 1082 ~gG~~~~~g~~~ 1093 (1383)
+ |++++.|...
T Consensus 529 ~-G~l~~~g~~~ 539 (559)
T COG4988 529 N-GRLVEQGTHE 539 (559)
T ss_pred C-CceeccCCHH
Confidence 5 8999999753
No 271
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=332.46 Aligned_cols=205 Identities=20% Similarity=0.299 Sum_probs=169.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-------CcceEEEecCCC--
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHD-- 254 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~~-- 254 (1383)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35999999999999999999999999999999999999987 899999999875421 246799999986
Q ss_pred CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccc
Q 000628 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1383)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 333 (1383)
.+++ .||.||+.|+....+.. .. + ....++.+++.+||+ +..++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMN----------LD----------E--------------VKNYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCChhhhhC
Confidence 3454 59999998864321110 00 0 011356678899997 66777
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+.+ |||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++.+..+.|++++.|+. .++.+++|+
T Consensus 142 ~~~~-----LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~-~~~~~~~dr 215 (286)
T PRK13646 142 SPFQ-----MSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDM-NEVARYADE 215 (286)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCH-HHHHHhCCE
Confidence 7766 9999999999999999999999999999999999999999999999765567777776554 478889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
|++|++|++++.|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999998864
No 272
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=321.01 Aligned_cols=202 Identities=23% Similarity=0.309 Sum_probs=182.0
Q ss_pred eEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---h---cc-cceEEEEccCCCCCC
Q 000628 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---E---TF-ARVSGYCEQNDIHSP 953 (1383)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~---~~-~~~~gyv~Q~~~~~~ 953 (1383)
.-++|+|++++.||++.|||-||||||||+++|.+... +..|+|.++|.++.. . .+ ++.+++|+|+..++|
T Consensus 42 vGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlP 119 (386)
T COG4175 42 VGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLP 119 (386)
T ss_pred EeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcccc
Confidence 46899999999999999999999999999999999876 458999999987532 2 23 357999999999999
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000628 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1383)
Q Consensus 954 ~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1383)
+.||.||+.|+..++ ..+++++++++.+.|+.+||....+.. +++|||||||||.|||||+.+|+||+||||
T Consensus 120 hrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~y-----p~eLSGGMqQRVGLARAla~~~~IlLMDEa 191 (386)
T COG4175 120 HRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKY-----PNELSGGMQQRVGLARALANDPDILLMDEA 191 (386)
T ss_pred chhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcC-----cccccchHHHHHHHHHHHccCCCEEEecCc
Confidence 999999999998776 567889999999999999999999998 458999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1034 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
+|.|||--+.++++.|.++.++ ++|||++|||++ |.+..-|+|.+|+ +|+++..|++.+
T Consensus 192 FSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~e 251 (386)
T COG4175 192 FSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPEE 251 (386)
T ss_pred hhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHHH
Confidence 9999999999999999998755 899999999987 7888999999997 589999998753
No 273
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.7e-34 Score=337.72 Aligned_cols=209 Identities=21% Similarity=0.286 Sum_probs=173.1
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCC--
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHD-- 254 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~-- 254 (1383)
...+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.+.. .++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 357999999999999999999999999999999999999886 999999999886543 235799999997
Q ss_pred CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccc
Q 000628 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1383)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 333 (1383)
.++|.+||.||+.+..+....+ +.+. +....++.+++.+||. +..++
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~--------~~~~------------------------~~~~~~~~~l~~vgl~~~~~~~ 157 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPK--------LSRQ------------------------EVKDRVKAMMLKVGLLPNLINR 157 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccC--------CCHH------------------------HHHHHHHHHHHHcCCChHHhcC
Confidence 5788999999998754321100 0000 0112345678899994 45677
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+.+ |||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+..+.|++++. |....+.+++|+
T Consensus 158 ~p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iT-Hdl~~~~~~~dr 231 (331)
T PRK15079 158 YPHE-----FSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIA-HDLAVVKHISDR 231 (331)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEe-CCHHHHHHhCCE
Confidence 7765 9999999999999999999999999999999999999999999999875566666655 555688889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999998875
No 274
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.8e-34 Score=337.74 Aligned_cols=225 Identities=20% Similarity=0.282 Sum_probs=180.8
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 932 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~~~G~i~i~g~~ 932 (1383)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47888887665321 12356999999999999999999999999999999999976531 237999999987
Q ss_pred CCh---hc---cc-ceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000628 933 KNQ---ET---FA-RVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG 1003 (1383)
Q Consensus 933 ~~~---~~---~~-~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~ 1003 (1383)
+.. .. ++ +.++||+|++ .+.|.+|+.+++.+...... ....++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 632 22 22 4799999998 67899999999987654332 234455566789999999997533221 1 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
+.+|||||||||+||+||+.+|+|||+||||+|||+.++..++++|+++.++ |.|||++|||++ .+.+.+|++++|.
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~- 236 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMY- 236 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEE-
Confidence 5689999999999999999999999999999999999999999999999765 899999999975 4566899999997
Q ss_pred CcEEEEecCCC
Q 000628 1083 GGRVIYAGPLG 1093 (1383)
Q Consensus 1083 gG~~~~~g~~~ 1093 (1383)
+|++++.|+..
T Consensus 237 ~G~ive~g~~~ 247 (330)
T PRK09473 237 AGRTMEYGNAR 247 (330)
T ss_pred CCEEEEECCHH
Confidence 58999999853
No 275
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2e-34 Score=323.94 Aligned_cols=206 Identities=27% Similarity=0.401 Sum_probs=171.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC--cceEEEecCCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP--QRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~--~~~~~yv~Q~~~~~~~lT 261 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999999887 9999999998754322 257999999998888999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.+.....+.. .. + ....++.+++.+||++..++.+++
T Consensus 91 ~~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gl~~~~~~~~~~---- 132 (236)
T TIGR03864 91 VRQNLRYHAALHGLS----------RA----------E--------------ARERIAALLARLGLAERADDKVRE---- 132 (236)
T ss_pred HHHHHHHHHHhcCCC----------HH----------H--------------HHHHHHHHHHHcCChhhhcCChhh----
Confidence 999998754322100 00 0 011245678889999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++. .+|++++|++|+
T Consensus 133 -LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 133 -LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EIE-ADDRLVVLHRGR 209 (236)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hHh-hCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999987645678777776654 554 599999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
+++.|+.+++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999887753
No 276
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-35 Score=361.99 Aligned_cols=221 Identities=23% Similarity=0.309 Sum_probs=183.3
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+||||++++||+++|+||||||||||+++|+|...+++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 367888876542 3469999999999999999999999999999999999765323589999999876
Q ss_pred Chh----cccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 934 NQE----TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 934 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
... ..++.+|||+|++.+++.+||+||+.+....+.......++..+.++++++.+++.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 421 124569999999999999999999988653321111123344556899999999987777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|.|||++||+++ ++.+.||++++|.+ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999878999999999975 56678999999985 899999
Q ss_pred cCCCc
Q 000628 1090 GPLGH 1094 (1383)
Q Consensus 1090 g~~~~ 1094 (1383)
|+..+
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 98764
No 277
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.2e-34 Score=320.64 Aligned_cols=198 Identities=24% Similarity=0.310 Sum_probs=166.7
Q ss_pred EeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-hcccceEEEEccCCCCCCCCCHHHH
Q 000628 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-ETFARVSGYCEQNDIHSPYVTVYES 960 (1383)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 960 (1383)
+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 46799999999999999999999999999999997653 47999999987532 2345679999999999999999999
Q ss_pred HHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHH
Q 000628 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1040 (1383)
Q Consensus 961 l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~ 1040 (1383)
+.+...... .. ....++.++++++.++|.+..++. ++.||||||||++||++|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KL-NAEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Cc-cHHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987542211 11 122345678899999998777766 4579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC
Q 000628 1041 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 1091 (1383)
Q Consensus 1041 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1091 (1383)
++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999975 56678999999974 88888764
No 278
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=5.5e-34 Score=321.73 Aligned_cols=173 Identities=25% Similarity=0.321 Sum_probs=134.2
Q ss_pred eeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHH
Q 000628 883 LHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLL 962 (1383)
Q Consensus 883 L~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 962 (1383)
|+==.++|..||+++++||||-||||+.++|+|..++ .+|. . ..-.++|-||--.--...||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~-------~~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----E-------EDLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----C-------ccceEeecceeecCCCCCcHHHHHH
Confidence 4444567889999999999999999999999996553 2443 1 1123788888655556789999775
Q ss_pred HHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHH
Q 000628 963 YSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1042 (1383)
Q Consensus 963 f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~ 1042 (1383)
-...-+... .-.-.++++-++|.++.++.+ .+|||||.|||+||.+|.++.++.+||||++.||.+.+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 432211111 123467888899999888874 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1043 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1043 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
-.+-+.||+..++ ++|.+++-||..+ +--..|++++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999999999865 7899999998653 334567777764
No 279
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=8e-35 Score=320.39 Aligned_cols=189 Identities=24% Similarity=0.359 Sum_probs=161.4
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC---h----hcccceEEEEccCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---Q----ETFARVSGYCEQNDIHS 952 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~~~ 952 (1383)
+.+|+|||+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999765 34799999998742 1 12456799999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000628 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1383)
Q Consensus 953 ~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1383)
+.+|++||+.+..... .....+..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999998865432 2223444567889999999987777663 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEE
Q 000628 1033 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1383)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1080 (1383)
||+|||+.++..+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999999877999999999975 45678988764
No 280
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=329.46 Aligned_cols=216 Identities=23% Similarity=0.291 Sum_probs=175.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1383)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 578899887652 24699999999999999999999999999999999996542 12579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL----NDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~ 1001 (1383)
.+... ..+++.++|++|++.+++. ||.||+.+....+.. .....+..+.++++++.+++.+. .+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87532 2345679999999888875 999999886543311 11223334567899999999542 2333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+...+|++++|.
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 789999999976 4667899999998
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 5 899988874
No 281
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-34 Score=314.63 Aligned_cols=190 Identities=59% Similarity=0.963 Sum_probs=159.9
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++.. ..++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 36788887765311 012469999999999999999999999999999999999642223589999999876
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000628 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1383)
. ...++.++|++|++.+++.+||+||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 4 345677999999999999999999998643110 49999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||++||+++.++.+.+|++++|.++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999987799999999998634577899999997548888765
No 282
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-35 Score=318.67 Aligned_cols=222 Identities=25% Similarity=0.338 Sum_probs=194.0
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-------cceEEEecCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~ 255 (1383)
...-++|+|++++.||+..|||-||||||||+++|.++.+|+ +|+|.++|.++..... ++.+++|+|+..
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 345689999999999999999999999999999999999997 9999999998876653 367999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1383)
++|+.||.||..|+.+.+|.+.. | .+.+..+.|+..||+...+..+
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~----------e------------------------r~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKA----------E------------------------REERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCHH----------H------------------------HHHHHHHHHHHcCchhhhhcCc
Confidence 99999999999999999887531 1 1223566899999999999998
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
.+ ||||+||||.+||||..+|+||+||||+|+|||--+.++.+.|.++.+.+++|+|.. +|..+|.+++.|+|.
T Consensus 163 ~e-----LSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFi-tHDLdEAlriG~rIa 236 (386)
T COG4175 163 NE-----LSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFI-THDLDEALRIGDRIA 236 (386)
T ss_pred cc-----ccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEE-ecCHHHHHhccceEE
Confidence 87 999999999999999999999999999999999999999999999988888776655 567889999999999
Q ss_pred EEcCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhh
Q 000628 416 LLSEGQIVYQGPRDNVLEFFEHMGFKCPERKGVADFLQEV 455 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~~~f~~lGf~~p~~~~~adfl~~v 455 (1383)
+|.+|+|+..|+++|++. .|...-+++|..++
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999974 25554556666554
No 283
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=8.9e-35 Score=376.99 Aligned_cols=206 Identities=24% Similarity=0.322 Sum_probs=171.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-G 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-c
Confidence 45899999999999999999999999999999999999997 9999999999877653 578999999999886 5
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++|||.++.. +.+.++..+++...+. +..+ -.|++..||.+|+ .+
T Consensus 568 Ti~eNi~l~~~-------------------------~~~~~~i~~al~~~~l------~~~i--~~lp~gl~t~i~e-~G 613 (710)
T TIGR03796 568 TVRDNLTLWDP-------------------------TIPDADLVRACKDAAI------HDVI--TSRPGGYDAELAE-GG 613 (710)
T ss_pred cHHHHhhCCCC-------------------------CCCHHHHHHHHHHhCC------HHHH--HhCcCcccceecc-CC
Confidence 99999987421 1111222233322221 1111 2377889999996 46
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
++||||||||++||||++++|++++||||||+||+.++.++.+.|++ .++|+|++.|++ ++...+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~IiitHrl--~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCIIVAHRL--STIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEEEecCH--HHHHhCCEEEEEeCC
Confidence 77999999999999999999999999999999999999999999986 368888887765 567889999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
++++.|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 284
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=325.77 Aligned_cols=220 Identities=20% Similarity=0.290 Sum_probs=175.9
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g 930 (1383)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 467788876542 2469999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1383)
.++.. ..+++.++|++|++.+++.+|++||+.+...... .....+.++.++++++.+++.+....... ..+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcC
Confidence 87532 2356779999999999999999999987543221 11223334567889999998542111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|. +|+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFY-MGD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEE-CCE
Confidence 7999999999999999999999999999999999999999999999975 689999999975 5668899999997 489
Q ss_pred EEEecCC
Q 000628 1086 VIYAGPL 1092 (1383)
Q Consensus 1086 ~~~~g~~ 1092 (1383)
+++.|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9998875
No 285
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.03 Aligned_cols=220 Identities=21% Similarity=0.284 Sum_probs=178.9
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++... ....+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 367888887653100 0012469999999999999999999999999999999999765 3479999999876
Q ss_pred Ch----hcccceEEEEccCCCC-CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000628 934 NQ----ETFARVSGYCEQNDIH-SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 934 ~~----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1383)
.. ...++.+||++|++.. +...||.|++.|..... .....+.++.++++++.++|.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 42 2346789999999742 33469999998875432 2234455567899999999988877764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1087 (1383)
||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++ ..+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~-~~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EA-VEADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HH-hcCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 999999999986 34 45999999985 8999
Q ss_pred EecCCC
Q 000628 1088 YAGPLG 1093 (1383)
Q Consensus 1088 ~~g~~~ 1093 (1383)
+.|+..
T Consensus 224 ~~g~~~ 229 (280)
T PRK13633 224 MEGTPK 229 (280)
T ss_pred EecCHH
Confidence 988753
No 286
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=367.13 Aligned_cols=209 Identities=23% Similarity=0.365 Sum_probs=172.4
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 45999999999999999999999999999999999999997 8999999999877653 478999999999886 5
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++|||.++..- +.+.++..+++...+. +..+ -.|++..||.+|+. +
T Consensus 432 Ti~~Ni~~~~~~------------------------~~~~~~i~~al~~~~l------~~~i--~~lp~Gldt~ig~~-g 478 (582)
T PRK11176 432 TIANNIAYARTE------------------------QYSREQIEEAARMAYA------MDFI--NKMDNGLDTVIGEN-G 478 (582)
T ss_pred hHHHHHhcCCCC------------------------CCCHHHHHHHHHHhCc------HHHH--HhcccccCceeCCC-C
Confidence 999999875210 0111122222222111 1122 23778899999974 5
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
+.||||||||++|||||+++|++++||||||+||+.++..+.+.|+++.+ ++|+|++.|++ +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~tvI~VtHr~--~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK--NRTSLVIAHRL--STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECC
Confidence 67999999999999999999999999999999999999999999998753 57888887766 577889999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
+++++|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999999864
No 287
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=330.80 Aligned_cols=207 Identities=27% Similarity=0.384 Sum_probs=169.4
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc------eEEEEEEEcCccCCh---hcccceEEEEccCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YIEGDIKISGYPKNQ---ETFARVSGYCEQNDI 950 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~ 950 (1383)
+.+|+|||++|++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+... ...++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 46999999999999999999999999999999999975431 127999999987532 234566899999987
Q ss_pred CCCCCCHHHHHHHHHHhhc-CCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh-------
Q 000628 951 HSPYVTVYESLLYSAWLRL-SSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELV------- 1022 (1383)
Q Consensus 951 ~~~~lTv~E~l~f~~~l~~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~------- 1022 (1383)
.++.+||+||+.+...... .......+..+.++++++.+++.+..++. +..|||||||||+||++|+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~~~~~~ 168 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----VTTLSGGELARVQFARVLAQLWPPHD 168 (272)
T ss_pred CCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhccccccc
Confidence 6667999999987532111 00111123345688999999998776665 4579999999999999999
Q ss_pred --hCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1023 --ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1023 --~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+..
T Consensus 169 ~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 169 AAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHADRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred cCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEEecCHH
Confidence 599999999999999999999999999999766 899999999976 56678999999985 8999988753
No 288
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=330.46 Aligned_cols=216 Identities=25% Similarity=0.308 Sum_probs=178.8
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4788888875521 12358999999999999999999999999999999999765 3479999999875
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
.. ...++.++|++|++. +++..|+.+|+.+..... ....++..+.++++++.+++.+..+.. +..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 32 345667999999985 677889999998864322 223344455688999999998777765 457999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++. .+|++++|.+ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998765 899999999986 454 5999999975 89999
Q ss_pred ecCCC
Q 000628 1089 AGPLG 1093 (1383)
Q Consensus 1089 ~g~~~ 1093 (1383)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 98853
No 289
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.4e-34 Score=324.17 Aligned_cols=205 Identities=20% Similarity=0.330 Sum_probs=171.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-----CcceEEEecCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-----PQRTCAYISQHDLHHG 258 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~~~~~~ 258 (1383)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 46999999999999999999999999999999999999887 999999999876421 2457999999999999
Q ss_pred CCCHHHHHHHhhhc-cCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 259 EMTVRETLDFSGRC-LGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 259 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
.+||+||+.|+... .+.. .. + ....++.+++.+||++..+..+.+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gl~~~~~~~~~~ 136 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS----------KE----------E--------------AEKQARELLAKVGLAERAHHYPSE 136 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC----------HH----------H--------------HHHHHHHHHHHcCChHHHhcChhh
Confidence 99999999875311 1100 00 0 011346688899998777777765
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.|++ .++.+++|++++|
T Consensus 137 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~-~~~~~~~d~i~~l 209 (240)
T PRK09493 137 -----LSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EGMTMVIVTHEI-GFAEKVASRLIFI 209 (240)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999875 367777776654 5788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000628 418 SEGQIVYQGPRDNVL 432 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1383)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 290
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.5e-34 Score=372.94 Aligned_cols=206 Identities=25% Similarity=0.376 Sum_probs=167.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-G 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-c
Confidence 46999999999999999999999999999999999999997 9999999999877653 578999999999886 6
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++|||.++..- .+.++..+++...+. +..++ .|++..||.+|+ .+
T Consensus 570 TIreNI~~g~~~-------------------------~~~e~i~~al~~a~l------~~~i~--~lp~GldT~ige-~G 615 (711)
T TIGR00958 570 SVRENIAYGLTD-------------------------TPDEEIMAAAKAANA------HDFIM--EFPNGYDTEVGE-KG 615 (711)
T ss_pred CHHHHHhcCCCC-------------------------CCHHHHHHHHHHcCC------HHHHH--hCCCccCCcccC-CC
Confidence 999999885210 011122222222221 11122 367789999996 35
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
..||||||||++||||++++|+|++||||||+||+.+...+.+ ... ..++|+|+..|++ ++.+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIiItHrl--~~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLLIAHRL--STVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEEEeccH--HHHHhCCEEEEEECC
Confidence 6799999999999999999999999999999999999998888 222 2467888887776 567889999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
+++++|+++++++
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999875
No 291
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-34 Score=314.75 Aligned_cols=183 Identities=45% Similarity=0.745 Sum_probs=156.3
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--CcceEEEecCCCCCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGE 259 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~ 259 (1383)
.++.+|+|+|+++++|++++|+||||||||||+++|+|.++|....+|+|.++|+++.... .++.++|++|++.+++.
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 97 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPT 97 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCC
Confidence 3457999999999999999999999999999999999999831123999999999876532 34679999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.++.+.. .++.+.
T Consensus 98 ~tv~~~l~~~~~~~---------------------------------------------------------~~~~~~--- 117 (202)
T cd03233 98 LTVRETLDFALRCK---------------------------------------------------------GNEFVR--- 117 (202)
T ss_pred CcHHHHHhhhhhhc---------------------------------------------------------cccchh---
Confidence 99999998742100 123333
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.+++++.||+..++.+++|++++|++
T Consensus 118 --~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 118 --GISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred --hCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 399999999999999999999999999999999999999999999987654667788888887889999999999999
Q ss_pred CeEEEec
Q 000628 420 GQIVYQG 426 (1383)
Q Consensus 420 G~iv~~G 426 (1383)
|++++.|
T Consensus 196 G~i~~~g 202 (202)
T cd03233 196 GRQIYYG 202 (202)
T ss_pred CEEEecC
Confidence 9998765
No 292
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.5e-34 Score=373.54 Aligned_cols=208 Identities=25% Similarity=0.433 Sum_probs=174.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35899999999999999999999999999999999999997 9999999999887654 578999999999886 5
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++|||.++.. +.+.++..+++...+. +..+ -.|++..||.+|+ .+
T Consensus 554 TI~eNi~~~~~-------------------------~~~~~~i~~a~~~~~l------~~~i--~~lp~gl~T~i~e-~G 599 (694)
T TIGR03375 554 TLRDNIALGAP-------------------------YADDEEILRAAELAGV------TEFV--RRHPDGLDMQIGE-RG 599 (694)
T ss_pred hHHHHHhCCCC-------------------------CCCHHHHHHHHHHcCh------HHHH--HhCcccccceecC-CC
Confidence 99999987521 1112223333332221 1111 2478889999996 46
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
..||||||||++||||++.+|++++||||||+||+.++..|.+.|+++.+ ++|+|++.|++ ++.+.||+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~--~~T~iiItHrl--~~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA--GKTLVLVTHRT--SLLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CCEEEEEecCH--HHHHhCCEEEEEeCC
Confidence 67999999999999999999999999999999999999999999998764 67888887776 567899999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
+++++|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999875
No 293
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=327.86 Aligned_cols=224 Identities=21% Similarity=0.277 Sum_probs=179.3
Q ss_pred ccCCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC---ceEEEE
Q 000628 849 PFQPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGD 925 (1383)
Q Consensus 849 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~ 925 (1383)
|..+..+.++|+++.++ .+.+|+|||+++++||++||+||||||||||+++|+|...+ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 33445688999887652 24699999999999999999999999999999999997542 135799
Q ss_pred EEEcCccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccccccccc
Q 000628 926 IKISGYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG 1000 (1383)
Q Consensus 926 i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g 1000 (1383)
|.++|.+... ...++.++|++|++.+++ .||+||+.+..... .....+..++.+.++++.++|.+..+....
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987632 234567999999988877 69999998864321 111233445668889999998532211111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEE
Q 000628 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1383)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1080 (1383)
. .+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++|
T Consensus 159 ~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l 235 (267)
T PRK14237 159 K-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFF 235 (267)
T ss_pred C-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEE
Confidence 1 246899999999999999999999999999999999999999999999986 4799999999986 577889999999
Q ss_pred ecCcEEEEecCC
Q 000628 1081 KRGGRVIYAGPL 1092 (1383)
Q Consensus 1081 ~~gG~~~~~g~~ 1092 (1383)
.+ |++++.|+.
T Consensus 236 ~~-G~i~~~g~~ 246 (267)
T PRK14237 236 YL-GDLIEYDKT 246 (267)
T ss_pred EC-CEEEEeCCH
Confidence 75 899999885
No 294
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=332.24 Aligned_cols=217 Identities=24% Similarity=0.309 Sum_probs=178.9
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCce-EEEEEEEcCcc
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-IEGDIKISGYP 932 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~-~~G~i~i~g~~ 932 (1383)
.++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4778888775421 12359999999999999999999999999999999999754321 13899999987
Q ss_pred CCh---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000628 933 KNQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 933 ~~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1383)
... ...++.+||++|++. .++..||+||+.|..... ....++.++.++++++.++|.+..+.. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 643 234567999999974 567899999998764322 233445556789999999998877766 45899
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1087 (1383)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..||++++|.+ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999976 34 67999999975 8999
Q ss_pred EecCC
Q 000628 1088 YAGPL 1092 (1383)
Q Consensus 1088 ~~g~~ 1092 (1383)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99875
No 295
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=334.06 Aligned_cols=219 Identities=20% Similarity=0.306 Sum_probs=175.4
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++... .....+|+|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 477888887653100 001359999999999999999999999999999999999765 3479999999865
Q ss_pred C--------hhcccceEEEEccCCCC-CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000628 934 N--------QETFARVSGYCEQNDIH-SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPG 1003 (1383)
Q Consensus 934 ~--------~~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~ 1003 (1383)
. ....++.++|++|++.. ....||+||+.|..... ....++..+.++++++.++|. +..++.
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 2 12345679999999742 22469999998864321 122344445678899999994 566655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
++.||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|.+
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999998764 899999999976 56788999999985
Q ss_pred CcEEEEecCC
Q 000628 1083 GGRVIYAGPL 1092 (1383)
Q Consensus 1083 gG~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 889988874
No 296
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.1e-34 Score=323.75 Aligned_cols=201 Identities=29% Similarity=0.425 Sum_probs=171.9
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh-cccceEEEEccCCCCCCCCCHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVY 958 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~ 958 (1383)
+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +..|+|.++|.+.... ..++.++|++|++.+++.+|+.
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 469999999999999999999999999999999999765 3479999999876432 2346799999999999999999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCC
Q 000628 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1038 (1383)
Q Consensus 959 E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD 1038 (1383)
||+.+....+. .......+.++++++.+++.+..++.. ..||+||+||++||++|+.+|++++|||||+|||
T Consensus 91 enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~~LD 162 (237)
T TIGR00968 91 DNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFGALD 162 (237)
T ss_pred HHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99987654321 222334456789999999987777663 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1039 ARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1039 ~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 163 ~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 215 (237)
T TIGR00968 163 AKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMS-NGKIEQIGSP 215 (237)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEE-CCEEEEecCH
Confidence 99999999999998775 899999999975 5677899999997 4889998885
No 297
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=324.42 Aligned_cols=196 Identities=22% Similarity=0.297 Sum_probs=166.2
Q ss_pred ceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh-cccceEEEEccCCCCCCCCCHHHHHHH
Q 000628 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVYESLLY 963 (1383)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f 963 (1383)
|||+++++||++||+||||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.||+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhc
Confidence 8999999999999999999999999999999765 3479999999875421 124579999999999999999999987
Q ss_pred HHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHH
Q 000628 964 SAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1043 (1383)
Q Consensus 964 ~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1043 (1383)
..... ... .+..++.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 95 ~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~ 166 (232)
T PRK10771 95 GLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQ 166 (232)
T ss_pred ccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 53211 111 1233556899999999988777764 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1044 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1044 ~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
.+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 167 ~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 167 EMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999998764 899999999976 56678999999985 899998875
No 298
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=336.14 Aligned_cols=216 Identities=21% Similarity=0.370 Sum_probs=172.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-------------------CCc
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------------------VPQ 244 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------------------~~~ 244 (1383)
.++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999987 99999999887542 124
Q ss_pred ceEEEecCCC--CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHH
Q 000628 245 RTCAYISQHD--LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVL 322 (1383)
Q Consensus 245 ~~~~yv~Q~~--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (1383)
+.++||+|++ .+++ .||+||+.|+....+.. . .+ ....++.++
T Consensus 116 ~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~----------~----------~~--------------~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVK----------K----------SE--------------AKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhcccc-chHHHHHHhhHHhcCCC----------H----------HH--------------HHHHHHHHH
Confidence 6799999986 4554 59999998864321110 0 00 011345678
Q ss_pred HHcCCc-ccccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEe
Q 000628 323 KILGLD-ICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALL 401 (1383)
Q Consensus 323 ~~lgL~-~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~ 401 (1383)
+.+||+ +..++.+.+ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.+ .+.|+|++.|
T Consensus 161 ~~~gL~~~~~~~~~~~-----LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TiiivtH 234 (320)
T PRK13631 161 NKMGLDDSYLERSPFG-----LSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-NNKTVFVITH 234 (320)
T ss_pred HHcCCChhHhcCCccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEec
Confidence 899996 456666555 999999999999999999999999999999999999999999999875 3677777665
Q ss_pred cCcchHHhhcCeEEEEcCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000628 402 QPAPETYDLFDDIILLSEGQIVYQGPRDNVLE---FFEHMGFKCPE 444 (1383)
Q Consensus 402 q~~~~~~~~~D~i~lL~~G~iv~~G~~~~~~~---~f~~lGf~~p~ 444 (1383)
+ ..++.++||+|++|++|++++.|+++++.+ .++..|..+|.
T Consensus 235 d-~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 T-MEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred C-HHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 5 446788999999999999999999988742 34445555444
No 299
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=329.74 Aligned_cols=215 Identities=21% Similarity=0.269 Sum_probs=174.2
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC---ceEEEEEEEc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKIS 929 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~ 929 (1383)
..+.++|+++.++ .+.+|+|+||+|++||+++|+||||||||||+++|+|.... .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 4578899887652 24699999999999999999999999999999999997431 1357999999
Q ss_pred CccCC-----hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000628 930 GYPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVG 1000 (1383)
Q Consensus 930 g~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g 1000 (1383)
|.+.. ....++.++|++|++.+++. ||+||+.+....+. .. ...++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFPK-SIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccchh-hHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 98753 22345679999999988874 99999988754331 11 123345678888888742 23333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEE
Q 000628 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1383)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1080 (1383)
+..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999986 577899999999
Q ss_pred ec----------CcEEEEecCC
Q 000628 1081 KR----------GGRVIYAGPL 1092 (1383)
Q Consensus 1081 ~~----------gG~~~~~g~~ 1092 (1383)
.+ .|++++.|++
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 85 3678888875
No 300
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.8e-33 Score=363.15 Aligned_cols=209 Identities=28% Similarity=0.354 Sum_probs=176.5
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++|+|++|.++. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 36899999998741 12469999999999999999999999999999999999866 348999999988
Q ss_pred CC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000628 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1383)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1383)
+. ...+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 64 4567889999999999876 49999998742 1 22 23467888888876543 5556544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|++||+++ ..+.+|++++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999886 589999999974 5678999999985
Q ss_pred CcEEEEecCC
Q 000628 1083 GGRVIYAGPL 1092 (1383)
Q Consensus 1083 gG~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 899999985
No 301
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.1e-34 Score=322.04 Aligned_cols=202 Identities=24% Similarity=0.322 Sum_probs=167.7
Q ss_pred ccceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC--CCcceEEEec-CCCCCCC
Q 000628 182 RSVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF--VPQRTCAYIS-QHDLHHG 258 (1383)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~-Q~~~~~~ 258 (1383)
..+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+.... ..++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 4467999999999999999999999999999999999999987 99999999875432 1245799997 5567788
Q ss_pred CCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCc
Q 000628 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1383)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1383)
.+||+||+.+.....+... . + ....++.+++.+||++..|+.+++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~l~~~gl~~~~~~~~~~- 153 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP----------A----------R--------------FKKRLDELSELLDLEELLDTPVRQ- 153 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH----------H----------H--------------HHHHHHHHHHHcCChhHhcCChhh-
Confidence 8999999987543221100 0 0 011245678889999888988876
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|+
T Consensus 154 ----LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~-~~~~~~~d~i~~l~ 228 (236)
T cd03267 154 ----LSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYM-KDIEALARRVLVID 228 (236)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCH-HHHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999998765567877776665 47888999999999
Q ss_pred CCeEEEec
Q 000628 419 EGQIVYQG 426 (1383)
Q Consensus 419 ~G~iv~~G 426 (1383)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 302
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=325.61 Aligned_cols=208 Identities=25% Similarity=0.356 Sum_probs=172.5
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 68 (241)
T PRK14250 4 IEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDIK 68 (241)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 57778776542 2469999999999999999999999999999999999765 34799999998753
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000628 935 Q---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSgG 1010 (1383)
. ...++.++|++|++.+++ .||+||+.+....+ . .....++++++.++|. +..++. +..||||
T Consensus 69 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G 135 (241)
T PRK14250 69 TIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSGG 135 (241)
T ss_pred hcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCHH
Confidence 2 234567999999988876 69999998754321 1 1124578899999996 455554 4579999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..
T Consensus 136 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (241)
T PRK14250 136 EAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVEY 213 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 999999999999999999999999999999999999999999764 999999999976 56678999999985 788888
Q ss_pred cCC
Q 000628 1090 GPL 1092 (1383)
Q Consensus 1090 g~~ 1092 (1383)
|+.
T Consensus 214 ~~~ 216 (241)
T PRK14250 214 AKT 216 (241)
T ss_pred CCH
Confidence 875
No 303
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.3e-34 Score=326.50 Aligned_cols=205 Identities=23% Similarity=0.319 Sum_probs=170.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-----------CCcceEEEecC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-----------VPQRTCAYISQ 252 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-----------~~~~~~~yv~Q 252 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 16 QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 35999999999999999999999999999999999999887 89999999987532 12457999999
Q ss_pred CCCCCCCCCHHHHHHHhhhc-cCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccc
Q 000628 253 HDLHHGEMTVRETLDFSGRC-LGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICA 331 (1383)
Q Consensus 253 ~~~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 331 (1383)
++.+++.+||+||+.++... .+.. . . +....++.+++.+||++..
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~gl~~~~ 138 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVKGEP----------K----------E--------------EATARARELLAKVGLAGKE 138 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhcCCC----------H----------H--------------HHHHHHHHHHHHcCCcchh
Confidence 99999999999999875321 1100 0 0 0011245678889998877
Q ss_pred cccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhc
Q 000628 332 DTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLF 411 (1383)
Q Consensus 332 dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~ 411 (1383)
|+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|+ ..++.+++
T Consensus 139 ~~~~~~-----LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~tvi~~tH~-~~~~~~~~ 211 (250)
T PRK11264 139 TSYPRR-----LSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQE-KRTMVIVTHE-MSFARDVA 211 (250)
T ss_pred hCChhh-----CChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhc-CCEEEEEeCC-HHHHHHhc
Confidence 777766 9999999999999999999999999999999999999999999998753 6677766554 45788899
Q ss_pred CeEEEEcCCeEEEecChhHHH
Q 000628 412 DDIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 412 D~i~lL~~G~iv~~G~~~~~~ 432 (1383)
|+|++|++|++++.|+.+++.
T Consensus 212 d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 212 DRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred CEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999988764
No 304
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.6e-34 Score=365.33 Aligned_cols=206 Identities=24% Similarity=0.326 Sum_probs=171.8
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 261 (1383)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5999999999999999999999999999999999999997 8999999999887654 5789999999999975 9
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
++|||.++.. . .+++ ..+++...+. +..++ .|++..||.+|+ .+.
T Consensus 431 i~~NI~~~~~---~--------------------~d~~---i~~a~~~~gl------~~~i~--~lp~Gldt~i~e-~g~ 475 (592)
T PRK10790 431 FLANVTLGRD---I--------------------SEEQ---VWQALETVQL------AELAR--SLPDGLYTPLGE-QGN 475 (592)
T ss_pred HHHHHHhCCC---C--------------------CHHH---HHHHHHHcCc------HHHHH--hccccccccccC-CCC
Confidence 9999988521 0 0111 1122221111 11222 267888999997 456
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
.||||||||++|||||+++|+|++||||||+||+.++..|.+.|+++.. ++|+|+..|++ +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIivtHr~--~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVVIAHRL--STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998754 57888888876 5677899999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
++..|+++++++
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 305
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=336.92 Aligned_cols=222 Identities=18% Similarity=0.220 Sum_probs=176.4
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC--ceEEEEEEEcCcc
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYIEGDIKISGYP 932 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g~~~G~i~i~g~~ 932 (1383)
+.++|++..++.. .+...+|+|||++|++||++||+|+||||||||+++|+|.... .+..|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6778887665321 1235699999999999999999999999999999999997542 1357999999987
Q ss_pred CCh---hcc----cceEEEEccCCC--CCCCCCHHHHHHHHHHhhcCCC---CcHHHHHHHHHHHHHHcCCccc---ccc
Q 000628 933 KNQ---ETF----ARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSD---VDTKKRKMFVDEVMELVELKSL---NDS 997 (1383)
Q Consensus 933 ~~~---~~~----~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~l~~~~~---~~~~~~~~~v~~~l~~l~L~~~---~~~ 997 (1383)
+.. ... ++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++++.++|.+. .+.
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 532 111 246999999986 5788999999976422111000 1112345678899999999753 233
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhce
Q 000628 998 MVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1076 (1383)
Q Consensus 998 ~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~ 1076 (1383)
. +..|||||||||+||+||+.+|+||||||||+|||+.++..++++|+++.++ |.|||++||+++ .+.+.+|+
T Consensus 155 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 155 F-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred C-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 3 4589999999999999999999999999999999999999999999999874 999999999975 46678999
Q ss_pred EEEEecCcEEEEecCC
Q 000628 1077 LLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1077 ~~~l~~gG~~~~~g~~ 1092 (1383)
+++|.+ |++++.|+.
T Consensus 229 i~vm~~-G~ive~g~~ 243 (330)
T PRK15093 229 INVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEC-CEEEEECCH
Confidence 999974 899999985
No 306
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.1e-34 Score=321.14 Aligned_cols=195 Identities=25% Similarity=0.367 Sum_probs=163.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 257 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 46999999999999999999999999999999999999887 999999999876432 235799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+||+||+.+.....+.. .. + ....++.+++.+||++..++.+++
T Consensus 91 ~~~t~~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 136 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP----------PR----------E--------------IRKRVPAALELVGLSHKHRALPAE 136 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCHHHhhCChhh
Confidence 9999999998864322110 00 0 011245678889998888887766
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|++++|
T Consensus 137 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~tiiivtH~~-~~~~~~~d~i~~l 209 (214)
T cd03292 137 -----LSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKA-GTTVVVATHAK-ELVDTTRHRVIAL 209 (214)
T ss_pred -----cCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998653 67777776654 5777899999999
Q ss_pred cCCeE
Q 000628 418 SEGQI 422 (1383)
Q Consensus 418 ~~G~i 422 (1383)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 307
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-34 Score=322.52 Aligned_cols=199 Identities=28% Similarity=0.398 Sum_probs=170.4
Q ss_pred EeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChh-cccceEEEEccCCCCCCCCCHHHH
Q 000628 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQE-TFARVSGYCEQNDIHSPYVTVYES 960 (1383)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~ 960 (1383)
+|+|+|++|+|||+++|+|+||||||||+++|+|... +..|+|.++|.+.... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 8999999999999999999999999999999999765 3479999999876431 234679999999999999999999
Q ss_pred HHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHH
Q 000628 961 LLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1040 (1383)
Q Consensus 961 l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~ 1040 (1383)
+.+..... .....+..+.+.++++.++|.+..++.+ ..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223344556788999999988777763 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1041 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1041 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
++..+.+.|++++.+ |+|||++||++. ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998765 999999999975 56778999999985 889988874
No 308
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.1e-34 Score=330.81 Aligned_cols=204 Identities=20% Similarity=0.211 Sum_probs=149.1
Q ss_pred CCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000628 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1383)
Q Consensus 851 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1383)
.|..+.+.++++.++. +..+++.+++..++.-...+++|+||+||||+++++.|..++ ..|-+-+.+
T Consensus 359 ~~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeecc
Confidence 3445677777654431 122689999999999999999999999999999999986542 356555443
Q ss_pred ccCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCH
Q 000628 931 YPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 931 ~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~g~~~~~~LSg 1009 (1383)
+++++|-.|...-+-.+.|.+- .+-...+ +... ++.+.+-+..+||.. ++... +.+|||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~--pG~~----~ee~r~hl~~~Gl~g~la~~s-----i~~LSG 485 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSF--PGKT----EEEIRRHLGSFGLSGELALQS-----IASLSG 485 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHHH-HHHHHhC--CCCC----HHHHHHHHHhcCCCchhhhcc-----ccccCC
Confidence 4568999997665544554432 2222222 2222 233677888999864 23222 457999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
|||-||++|.....+|.+|+|||||+.||..+-..+.+.|++. +..||++||+.+ -+-..|+++.+..+|...-..
T Consensus 486 GQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ie 561 (582)
T KOG0062|consen 486 GQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIE 561 (582)
T ss_pred cchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeee
Confidence 9999999999999999999999999999999999999999886 457999999864 355678999999864433444
Q ss_pred cC
Q 000628 1090 GP 1091 (1383)
Q Consensus 1090 g~ 1091 (1383)
|.
T Consensus 562 g~ 563 (582)
T KOG0062|consen 562 GG 563 (582)
T ss_pred cc
Confidence 44
No 309
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=326.31 Aligned_cols=215 Identities=22% Similarity=0.311 Sum_probs=173.8
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC-ceEEEEEEEcCccC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYIEGDIKISGYPK 933 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-g~~~G~i~i~g~~~ 933 (1383)
+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 45677766542 24699999999999999999999999999999999997431 23579999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccCCCCCC
Q 000628 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGLPGVSG 1006 (1383)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~~~~~~ 1006 (1383)
.. ...++.++|++|++.+++ .||+||+.+....+.... .....+++++++++.++|.+ ..+.. +..
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~ 142 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLKQN-----ALA 142 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhcCC-----ccc
Confidence 42 234567999999998887 699999988654331111 12334456789999999953 22332 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEE
Q 000628 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1383)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~ 1086 (1383)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|.+ |++
T Consensus 143 LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i 219 (246)
T PRK14269 143 LSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GEL 219 (246)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999864 899999999975 56778999999985 899
Q ss_pred EEecCC
Q 000628 1087 IYAGPL 1092 (1383)
Q Consensus 1087 ~~~g~~ 1092 (1383)
++.|+.
T Consensus 220 ~~~g~~ 225 (246)
T PRK14269 220 IEFGES 225 (246)
T ss_pred EEECCH
Confidence 998874
No 310
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=332.82 Aligned_cols=207 Identities=29% Similarity=0.368 Sum_probs=171.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCC--C---CCcceEEEecCCCC-CC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE--F---VPQRTCAYISQHDL-HH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~~~-~~ 257 (1383)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 35999999999999999999999999999999999999987 9999999998742 1 12357999999973 34
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
...||+||+.+.....+.. .. + ....++.+++.+||.+..++.+++
T Consensus 96 ~~~tv~e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~~~~ 141 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLP----------ED----------E--------------VRKRVDNALKRTGIEHLKDKPTHC 141 (283)
T ss_pred ccccHHHHHHhHHHHcCCC----------HH----------H--------------HHHHHHHHHHHCCChhhhhCCccc
Confidence 4689999998854321110 00 0 011356788999999888888776
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|++++.|+ ..++.++||++++|
T Consensus 142 -----LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~-~~~~~~~~dri~~l 215 (283)
T PRK13636 142 -----LSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHD-IDIVPLYCDNVFVM 215 (283)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecC-HHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999987556777777655 45677899999999
Q ss_pred cCCeEEEecChhHHHH
Q 000628 418 SEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1383)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988753
No 311
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.7e-34 Score=373.89 Aligned_cols=208 Identities=27% Similarity=0.383 Sum_probs=172.1
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|++||.++.+... ++.++||+|++.+|+ .
T Consensus 487 ~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 562 (708)
T TIGR01193 487 SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFS-G 562 (708)
T ss_pred CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehh-H
Confidence 35899999999999999999999999999999999999997 9999999999877654 578999999999886 4
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||+|||.++.+ ++.+.++..+++..++. +..+ -.|++..||.+|+ .+
T Consensus 563 TI~eNi~l~~~------------------------~~~~~~~i~~a~~~a~l------~~~i--~~lp~gldt~i~e-~G 609 (708)
T TIGR01193 563 SILENLLLGAK------------------------ENVSQDEIWAACEIAEI------KDDI--ENMPLGYQTELSE-EG 609 (708)
T ss_pred HHHHHHhccCC------------------------CCCCHHHHHHHHHHhCC------HHHH--HhcccccCcEecC-CC
Confidence 99999988521 11111222233332221 1111 2477889999986 46
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
.+||||||||++||||++++|++|+||||||+||+.++..+.+.|+++ .++|+|++.|.+ ++.+.+|+|++|++|
T Consensus 610 ~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~IiitHr~--~~~~~~D~i~~l~~G 684 (708)
T TIGR01193 610 SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIFVAHRL--SVAKQSDKIIVLDHG 684 (708)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEEEecch--HHHHcCCEEEEEECC
Confidence 779999999999999999999999999999999999999999999874 267888877766 567899999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
++++.|+++++++
T Consensus 685 ~i~~~G~~~~L~~ 697 (708)
T TIGR01193 685 KIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999865
No 312
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.5e-34 Score=342.38 Aligned_cols=194 Identities=26% Similarity=0.406 Sum_probs=168.1
Q ss_pred ceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hcccceEEEEccCCCCCCCCCH
Q 000628 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-------ETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999765 347999999987532 1245679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
+||+.|..... ...+.++.++++++.++|.+..++. +..|||||||||+|||||+.+|++|||||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRL-----PGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 1233445689999999998877776 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1038 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|.+ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999865 899999999986 57778999999985 899998875
No 313
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-34 Score=319.29 Aligned_cols=195 Identities=25% Similarity=0.388 Sum_probs=164.0
Q ss_pred cceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hcccceEEEEccCCCC
Q 000628 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-------ETFARVSGYCEQNDIH 951 (1383)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~ 951 (1383)
++.+ |||+++++ |+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+
T Consensus 12 ~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 86 (214)
T cd03297 12 DFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYAL 86 (214)
T ss_pred Ceee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCcc
Confidence 3445 99999999 9999999999999999999999765 347999999986531 1245679999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000628 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1383)
Q Consensus 952 ~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1383)
++.+|+.||+.+..... .....++.+.++++.+++.+..+.. +..||||||||++||++|+.+|++|+||
T Consensus 87 ~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllD 156 (214)
T cd03297 87 FPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLD 156 (214)
T ss_pred CCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999998764321 1223345688999999998766665 4579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1032 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
|||+|||+.+++.+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 157 EPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999999999865 899999999975 46678999999985 7887654
No 314
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3e-34 Score=362.13 Aligned_cols=207 Identities=26% Similarity=0.423 Sum_probs=170.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 353 ~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~ 428 (574)
T PRK11160 353 QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-A 428 (574)
T ss_pred CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-c
Confidence 35899999999999999999999999999999999999997 9999999999887654 467999999998886 5
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++||+.++.. +.+.++..+++...+. +..+ -. ++++||.+|+ .+
T Consensus 429 ti~~Ni~~~~~-------------------------~~~~~~i~~al~~~~l------~~~i--~~-p~GldT~vge-~g 473 (574)
T PRK11160 429 TLRDNLLLAAP-------------------------NASDEALIEVLQQVGL------EKLL--ED-DKGLNAWLGE-GG 473 (574)
T ss_pred cHHHHhhcCCC-------------------------ccCHHHHHHHHHHcCC------HHHH--cC-ccccCchhcC-CC
Confidence 99999988521 0011111222221111 1111 23 6788999997 36
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
+.||||||||++||||++++|++++|||||++||+.++..+.+.|+++.+ ++|+|++.|++ +....+|+|++|++|
T Consensus 474 ~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~--~~tviiitHr~--~~~~~~d~i~~l~~G 549 (574)
T PRK11160 474 RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ--NKTVLMITHRL--TGLEQFDRICVMDNG 549 (574)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC--CCEEEEEecCh--hHHHhCCEEEEEeCC
Confidence 66999999999999999999999999999999999999999999998753 67888888876 456779999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
++++.|+++++++
T Consensus 550 ~i~~~g~~~~l~~ 562 (574)
T PRK11160 550 QIIEQGTHQELLA 562 (574)
T ss_pred eEEEeCCHHHHHh
Confidence 9999999999864
No 315
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.2e-35 Score=338.59 Aligned_cols=209 Identities=25% Similarity=0.396 Sum_probs=170.8
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~ 259 (1383)
+.++|+|+|+++++||.+||+|++|||||||+++|+|-++|+ +|+|+.||.++..... ++.+++++|...+|.
T Consensus 350 ~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~- 425 (573)
T COG4987 350 QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRVHLFS- 425 (573)
T ss_pred ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccchHHHH-
Confidence 346999999999999999999999999999999999999998 9999999998876654 568999999877775
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
-|+|+||.++. |+...++..++....+- +.. ..+.++..||.+|+ .
T Consensus 426 ~Tlr~NL~lA~-------------------------~~AsDEel~~aL~qvgL------~~l--~~~~p~gl~t~lge-~ 471 (573)
T COG4987 426 GTLRDNLRLAN-------------------------PDASDEELWAALQQVGL------EKL--LESAPDGLNTWLGE-G 471 (573)
T ss_pred HHHHHHHhhcC-------------------------CCCCHHHHHHHHHHcCH------HHH--HHhChhhhhchhcc-C
Confidence 59999998852 22222222222211111 001 12345678899996 6
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
+++||||||||++|||+|++|+++++|||||.|||+.|..++++.|.+-++ ++|+++..|+-. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~--~kTll~vTHrL~--~le~~drIivl~~ 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE--GKTLLMVTHRLR--GLERMDRIIVLDN 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc--CCeEEEEecccc--cHhhcCEEEEEEC
Confidence 788999999999999999999999999999999999999999999987654 789888877654 4578999999999
Q ss_pred CeEEEecChhHHHH
Q 000628 420 GQIVYQGPRDNVLE 433 (1383)
Q Consensus 420 G~iv~~G~~~~~~~ 433 (1383)
|+++++|.+.+++.
T Consensus 548 Gkiie~G~~~~Ll~ 561 (573)
T COG4987 548 GKIIEEGTHAELLA 561 (573)
T ss_pred CeeeecCCHHhhhc
Confidence 99999999999874
No 316
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.4e-34 Score=321.71 Aligned_cols=201 Identities=27% Similarity=0.344 Sum_probs=163.7
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCC--CC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHD--LH 256 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~--~~ 256 (1383)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999887 999999999876533 245799999998 46
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMV 335 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 335 (1383)
++.+||+||+.+.....+.... .+. .....+.+++.+||. +..+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~-------------------~~~-------------~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSK-------------------KEA-------------RKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcH-------------------HHH-------------HHHHHHHHHHHCCCChhHhhCCc
Confidence 6789999999875432211000 000 000123567888985 5667777
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|+
T Consensus 144 ~~-----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~i~ 217 (228)
T cd03257 144 HE-----LSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDL-GVVAKIADRVA 217 (228)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCeEE
Confidence 66 9999999999999999999999999999999999999999999998764467777777665 47778999999
Q ss_pred EEcCCeEEEec
Q 000628 416 LLSEGQIVYQG 426 (1383)
Q Consensus 416 lL~~G~iv~~G 426 (1383)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 317
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-34 Score=326.73 Aligned_cols=205 Identities=26% Similarity=0.327 Sum_probs=170.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCC-CCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~ 259 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999987 999999999886432 2467999999974 5777
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.+.....+.. . . +....++.+++.+||++..++.+++
T Consensus 99 ~tv~enl~~~~~~~~~~----------~----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 142 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP----------P----------K--------------KMKDIIDDLAKKVGMEDYLDKEPQN-- 142 (271)
T ss_pred ccHHHHHHhHHHHcCCC----------H----------H--------------HHHHHHHHHHHHcCCHHHhhCCccc--
Confidence 89999998753311100 0 0 0011356688899999888888766
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ ..+|++++|++
T Consensus 143 ---LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~ 217 (271)
T PRK13632 143 ---LSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE 217 (271)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999987644578888877764 45 47999999999
Q ss_pred CeEEEecChhHHH
Q 000628 420 GQIVYQGPRDNVL 432 (1383)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1383)
|+++..|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 318
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=8.8e-34 Score=331.85 Aligned_cols=214 Identities=21% Similarity=0.249 Sum_probs=171.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-------cceEEEecCCC--
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHD-- 254 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~-- 254 (1383)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|....+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 469999999999999999999999999999999999998742248999999999865432 14799999998
Q ss_pred CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccccccc
Q 000628 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTM 334 (1383)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 334 (1383)
.+.+.+||.+++.+........ ... +....+..+++.+||++..++
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~---------~~~------------------------~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGM---------SKA------------------------EAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCC---------CHH------------------------HHHHHHHHHHHHcCCCChHHH-
Confidence 6888999999997653321100 000 001234567888999754322
Q ss_pred ccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
+ +...+.|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+..+.|++++.|+ ...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHd-l~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHD-LGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECC-HHHHHHhCCEE
Confidence 1 133456999999999999999999999999999999999999999999999987666676666554 45778899999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000628 415 ILLSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~~ 433 (1383)
++|++|++++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998853
No 319
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.5e-34 Score=320.27 Aligned_cols=194 Identities=28% Similarity=0.382 Sum_probs=162.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 257 (1383)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 46999999999999999999999999999999999999887 999999999876532 235799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+||+||+.+.....+.. + .+ ....++.+++.+||++..++.+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~-------------------~-~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 137 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKK-------------------E-RE--------------IQRRVGAALRQVGLEHKADAFPEQ 137 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC-------------------H-HH--------------HHHHHHHHHHHcCChhhhhCChhh
Confidence 9999999998864322110 0 00 011346688899998777777766
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|++++.|++ .++.++||++++|
T Consensus 138 -----LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~~-~~~~~~~d~i~~l 210 (214)
T TIGR02673 138 -----LSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RGTTVIVATHDL-SLVDRVAHRVIIL 210 (214)
T ss_pred -----CCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhcCEEEEe
Confidence 999999999999999999999999999999999999999999999865 367777776654 5888899999999
Q ss_pred cCCe
Q 000628 418 SEGQ 421 (1383)
Q Consensus 418 ~~G~ 421 (1383)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 320
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=333.56 Aligned_cols=205 Identities=23% Similarity=0.351 Sum_probs=168.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCC-----------------------
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE----------------------- 240 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~----------------------- 240 (1383)
..+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35899999999999999999999999999999999999987 8999999876421
Q ss_pred ----CCCcceEEEecCCC-CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchh
Q 000628 241 ----FVPQRTCAYISQHD-LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETS 315 (1383)
Q Consensus 241 ----~~~~~~~~yv~Q~~-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~ 315 (1383)
...++.+|||+|++ ..+...||+|||.|+....+... .+ ..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~--------------------~~--------------~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK--------------------EE--------------AK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH--------------------HH--------------HH
Confidence 01245799999985 34446799999998644322100 00 01
Q ss_pred hhHHHHHHHcCCc-ccccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCc
Q 000628 316 LVTDYVLKILGLD-ICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDV 394 (1383)
Q Consensus 316 ~~~~~~l~~lgL~-~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~ 394 (1383)
..++.+++.+||+ +..++.+.+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~~~~-----LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~ 216 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRSPFE-----LSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-QGK 216 (305)
T ss_pred HHHHHHHHHcCCChhhhhCChhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCC
Confidence 2356688999996 567777766 999999999999999999999999999999999999999999999875 467
Q ss_pred eEEEEEecCcchHHhhcCeEEEEcCCeEEEecChhHHH
Q 000628 395 TMIVALLQPAPETYDLFDDIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 395 t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G~~~~~~ 432 (1383)
|+|++.|+ ..++.+++|+|++|++|++++.|+++++.
T Consensus 217 tiiivtHd-~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 217 TIILVTHD-LDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred EEEEEeeC-HHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 76666554 55788999999999999999999998874
No 321
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=322.61 Aligned_cols=206 Identities=21% Similarity=0.353 Sum_probs=172.1
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999887 9999999998765332 3579999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.+..+...... . . +....++.+++.+||++..++.+++
T Consensus 93 ~tv~enl~~~~~~~~~~~---------~----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 137 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDLS---------A----------E--------------QREDRANELMEEFHIEHLRDSMGQS-- 137 (241)
T ss_pred CcHHHHHhhhhhcccccC---------H----------H--------------HHHHHHHHHHHHcCCHHHhhcchhh--
Confidence 999999987532211000 0 0 0012346678899998777777765
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.++++++ .+.|+|++.|++ .++.+++|++++|++
T Consensus 138 ---LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiii~sH~~-~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 138 ---LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHNV-RETLAVCERAYIVSQ 212 (241)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEEcCH-HHHHHhcCEEEEEeC
Confidence 999999999999999999999999999999999999999999998875 467777776654 578899999999999
Q ss_pred CeEEEecChhHHH
Q 000628 420 GQIVYQGPRDNVL 432 (1383)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1383)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 322
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=330.16 Aligned_cols=205 Identities=25% Similarity=0.370 Sum_probs=171.4
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCC-CCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL-HHGEM 260 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~-~~~~l 260 (1383)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4899999999999999999999999999999999999987 9999999998754322 356999999973 34468
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||.||+.+.....+... .+ ....++.+++.+||++..++.+++
T Consensus 95 tv~~~l~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE--------------------ET--------------VAHRVSSALHMLGLEELRDRVPHH--- 137 (277)
T ss_pred cHHHHHHhHHHHcCCCH--------------------HH--------------HHHHHHHHHHHCCChhHhcCCccc---
Confidence 99999987543211100 00 011356788999999888888876
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+.||+|++|++|
T Consensus 138 --LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~-~~~~~~~drv~~l~~G 214 (277)
T PRK13652 138 --LSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQL-DLVPEMADYIYVMDKG 214 (277)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998775567777776654 4788999999999999
Q ss_pred eEEEecChhHHH
Q 000628 421 QIVYQGPRDNVL 432 (1383)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1383)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998875
No 323
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.8e-34 Score=328.23 Aligned_cols=223 Identities=21% Similarity=0.283 Sum_probs=177.7
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.+..+.. +...+.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 678888876631100 000112469999999999999999999999999999999999765 34799999998754
Q ss_pred h---hcccceEEEEccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCC
Q 000628 935 Q---ETFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 935 ~---~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LS 1008 (1383)
. ...++.++|++|++. +.+.+|+.|++.+...... .....+..+.++++++.++|. +..+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 2 123456999999975 5678899999987654321 222334455688999999994 555554 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVI 1087 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1087 (1383)
|||||||+||++|+.+|+||||||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...||++++|.+ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999976 56677999999975 8898
Q ss_pred EecCC
Q 000628 1088 YAGPL 1092 (1383)
Q Consensus 1088 ~~g~~ 1092 (1383)
+.|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88874
No 324
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.5e-34 Score=321.72 Aligned_cols=201 Identities=24% Similarity=0.324 Sum_probs=166.2
Q ss_pred EeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc--eEEEEEEEcCccCChhcc-cceEEEEccCCC--CCCCCC
Q 000628 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YIEGDIKISGYPKNQETF-ARVSGYCEQNDI--HSPYVT 956 (1383)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 956 (1383)
+|+|||+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 578999999999999999999999999999999976520 147999999987654333 357999999984 557789
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000628 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK---SLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1383)
Q Consensus 957 v~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~---~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1383)
+.|++.+...... ......++.++++++.+++. +..+.. +..|||||||||+|||+|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543221 11233445689999999997 344444 457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1034 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999764 899999999976 56678999999975 899988874
No 325
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.1e-34 Score=321.24 Aligned_cols=202 Identities=26% Similarity=0.364 Sum_probs=168.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 46999999999999999999999999999999999999987 9999999998754322 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcC-CcccccccccCc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILG-LDICADTMVGDE 338 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 338 (1383)
+||+||+.++....+.. . ....+.+++.++ +++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~~~~~~- 131 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLGRRGGD- 131 (230)
T ss_pred CcHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhhCChhh-
Confidence 99999998764321100 0 001234555665 55556676665
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++..+.|+|++.|++ .++.+++|+|++|+
T Consensus 132 ----LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 132 ----LSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYL-DFARELADRYYVME 206 (230)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCH-HHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999998764467777776654 57888999999999
Q ss_pred CCeEEEecChhHH
Q 000628 419 EGQIVYQGPRDNV 431 (1383)
Q Consensus 419 ~G~iv~~G~~~~~ 431 (1383)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998876
No 326
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=341.14 Aligned_cols=191 Identities=26% Similarity=0.384 Sum_probs=166.7
Q ss_pred ceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-------hcccceEEEEccCCCCCCCCCH
Q 000628 885 SVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-------ETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 885 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.+||++|++.++|.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999765 347999999987532 2245779999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
+||+.|... ....+.++++++.++|.+..++. +..|||||||||+|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRY-----PGSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 11234588999999998877776 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1038 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|.+ |+++..|+..
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 214 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPLE 214 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCHH
Confidence 999999999999999765 899999999975 67788999999985 8999998853
No 327
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=339.65 Aligned_cols=195 Identities=25% Similarity=0.414 Sum_probs=169.8
Q ss_pred eeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-------CCcceEEEecCCCCCCCCCC
Q 000628 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~~~~~~lT 261 (1383)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++||+|++.+++++|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999987 99999999987531 12467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.|+.+. . ....++.+++.+||++..++.+++
T Consensus 93 v~enl~~~~~~---------------~-------------------------~~~~~~~~l~~~gl~~~~~~~~~~---- 128 (352)
T PRK11144 93 VRGNLRYGMAK---------------S-------------------------MVAQFDKIVALLGIEPLLDRYPGS---- 128 (352)
T ss_pred HHHHHHhhhhh---------------h-------------------------hHHHHHHHHHHcCCchhhhCCccc----
Confidence 99999875210 0 001246688899999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|+ ..++..++|+|++|++|+
T Consensus 129 -LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd-~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHS-LDEILRLADRVVVLEQGK 206 (352)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecC-HHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999999987556777776655 458899999999999999
Q ss_pred EEEecChhHHH
Q 000628 422 IVYQGPRDNVL 432 (1383)
Q Consensus 422 iv~~G~~~~~~ 432 (1383)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999885
No 328
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=325.20 Aligned_cols=215 Identities=21% Similarity=0.303 Sum_probs=174.5
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478888876542 2469999999999999999999999999999999999653 11 1479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL----NDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~ 1001 (1383)
.+... ...++.+||++|++.+++. ||+||+.+....+. ....++..+.++++++.+++.+. .+..
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--- 152 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--- 152 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhCC---
Confidence 87531 2345679999999988875 99999987643321 11223444567889999988542 2332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.+|++++|.
T Consensus 153 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 228 (259)
T PRK14274 153 --ALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY 228 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999976 5677899999997
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |+++..|+.
T Consensus 229 ~-G~i~~~g~~ 238 (259)
T PRK14274 229 M-GELVECNDT 238 (259)
T ss_pred C-CEEEEECCH
Confidence 4 899998875
No 329
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=323.80 Aligned_cols=215 Identities=23% Similarity=0.279 Sum_probs=174.4
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 467788776542 246999999999999999999999999999999999964321 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+... ...++.++|++|++.+++ .|++||+.|....... ....+..++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 234567999999998887 8999999886543211 122344456788999998743 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|.
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999876 699999999975 5677899999997
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 899998875
No 330
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=324.01 Aligned_cols=215 Identities=26% Similarity=0.315 Sum_probs=173.3
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 367888876542 2469999999999999999999999999999999999632 2 12379999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87531 234567999999998877 899999987643321 1112334456788899998743 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|.
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999975 5778899999998
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 889998875
No 331
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=323.81 Aligned_cols=204 Identities=22% Similarity=0.285 Sum_probs=170.2
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCC-CCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGEM 260 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~l 260 (1383)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999987 999999999875432 2457999999974 67788
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|+++|+.|.....+... .+ ....++.+++.+||.+..++.+++
T Consensus 100 ~v~~~~~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 142 (269)
T PRK13648 100 IVKYDVAFGLENHAVPY--------------------DE--------------MHRRVSEALKQVDMLERADYEPNA--- 142 (269)
T ss_pred cHHHHHHhhHHhcCCCH--------------------HH--------------HHHHHHHHHHHcCCchhhhCCccc---
Confidence 99999988643221100 00 011245678899998877877765
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++.. +|+|++|++|
T Consensus 143 --LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~~-~d~i~~l~~G 218 (269)
T PRK13648 143 --LSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAME-ADHVIVMNKG 218 (269)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHhc-CCEEEEEECC
Confidence 99999999999999999999999999999999999999999999987644678888777654 5554 9999999999
Q ss_pred eEEEecChhHHH
Q 000628 421 QIVYQGPRDNVL 432 (1383)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1383)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999998874
No 332
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-34 Score=328.46 Aligned_cols=216 Identities=24% Similarity=0.321 Sum_probs=178.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++. .....+|+|||+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 4678888876531 012359999999999999999999999999999999999765 3479999999876
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 934 NQ---ETFARVSGYCEQNDI-HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 42 234677999999974 567789999998764322 223344456689999999998877765 457999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
|||||++|||+|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++ ..+|++++|.+ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EA-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999976 34 46999999985 78988
Q ss_pred ecCC
Q 000628 1089 AGPL 1092 (1383)
Q Consensus 1089 ~g~~ 1092 (1383)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 333
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-34 Score=331.67 Aligned_cols=211 Identities=20% Similarity=0.260 Sum_probs=170.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC-CceeEEEECCeeCCCCCC-------cceEEEecCCC-
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL-RASGKITYCGHELNEFVP-------QRTCAYISQHD- 254 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~- 254 (1383)
.++|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987421 238999999998865432 13699999998
Q ss_pred -CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc---c
Q 000628 255 -LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI---C 330 (1383)
Q Consensus 255 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~ 330 (1383)
.+.|.+||.+++....+..... .+. +....++.+++.+||++ .
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~---------~~~------------------------~~~~~~~~~L~~~gL~~~~~~ 146 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGG---------NKK------------------------TRRQRAIDLLNQVGIPDPASR 146 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCC---------CHH------------------------HHHHHHHHHHHHCCCCChHHH
Confidence 4788999999987643221000 000 01123566889999974 3
Q ss_pred ccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhh
Q 000628 331 ADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL 410 (1383)
Q Consensus 331 ~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~ 410 (1383)
.+..+++ |||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+..+.|++++.|+ ...+.++
T Consensus 147 l~~~p~~-----LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHd-l~~~~~~ 220 (326)
T PRK11022 147 LDVYPHQ-----LSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHD-LALVAEA 220 (326)
T ss_pred HhCCchh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHh
Confidence 4555554 999999999999999999999999999999999999999999999987667776666554 4577889
Q ss_pred cCeEEEEcCCeEEEecChhHHHH
Q 000628 411 FDDIILLSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 411 ~D~i~lL~~G~iv~~G~~~~~~~ 433 (1383)
+|+|++|++|++++.|+.+++.+
T Consensus 221 adri~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 221 AHKIIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred CCEEEEEECCEEEEECCHHHHhh
Confidence 99999999999999999988753
No 334
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-34 Score=324.26 Aligned_cols=194 Identities=22% Similarity=0.295 Sum_probs=166.3
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHHH
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRE 264 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E 264 (1383)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5899999999999999999999999999999999999887 9999999987643 2467999999999999899999
Q ss_pred HHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCC
Q 000628 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1383)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 344 (1383)
|+.+... . . ....++.+++.+||++..+..+++ ||
T Consensus 101 nl~~~~~--~---------~-----------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS 135 (257)
T PRK11247 101 NVGLGLK--G---------Q-----------------------------WRDAALQALAAVGLADRANEWPAA-----LS 135 (257)
T ss_pred HHHhccc--c---------h-----------------------------HHHHHHHHHHHcCChhHhcCChhh-----CC
Confidence 9987421 0 0 001245578889998877777766 99
Q ss_pred hHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEE
Q 000628 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1383)
Q Consensus 345 GGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~ 424 (1383)
|||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~-~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDV-SEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999999999998765567777776654 47788999999999999999
Q ss_pred ecChh
Q 000628 425 QGPRD 429 (1383)
Q Consensus 425 ~G~~~ 429 (1383)
.|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88764
No 335
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-34 Score=323.80 Aligned_cols=201 Identities=24% Similarity=0.351 Sum_probs=167.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 263 (1383)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999999887 9999999998754 234689999999999999999
Q ss_pred HHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCC
Q 000628 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1383)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1383)
||+.+.....+.. .. + ....++.+++.+||++..++.+++ |
T Consensus 89 e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gl~~~~~~~~~~-----L 129 (255)
T PRK11248 89 DNVAFGLQLAGVE----------KM----------Q--------------RLEIAHQMLKKVGLEGAEKRYIWQ-----L 129 (255)
T ss_pred HHHHhHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCChhHhhCChhh-----C
Confidence 9998753321110 00 0 011356688899998877777766 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc--CCe
Q 000628 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS--EGQ 421 (1383)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~--~G~ 421 (1383)
||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|+ ..++.++||+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~-~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHD-IEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEeCCCcE
Confidence 99999999999999999999999999999999999999999999865446777776655 457889999999998 599
Q ss_pred EEEecChh
Q 000628 422 IVYQGPRD 429 (1383)
Q Consensus 422 iv~~G~~~ 429 (1383)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99987754
No 336
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.7e-34 Score=318.64 Aligned_cols=196 Identities=21% Similarity=0.349 Sum_probs=163.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC------c-ceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------Q-RTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~-~~~~yv~Q~~~~ 256 (1383)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... + +.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999987 9999999998765432 1 569999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccccccccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1383)
++.+||+||+.+........ .. + ....++.+++.+||++..++.++
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 140 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------VK----------E--------------AKERAYEMLEKVGLEHRINHRPS 140 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------HH----------H--------------HHHHHHHHHHHcCChhhhhCChh
Confidence 98999999998853321100 00 0 01124567889999887777776
Q ss_pred CcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEE
Q 000628 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1383)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~l 416 (1383)
. |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ +.+|+|++
T Consensus 141 ~-----LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~ 213 (221)
T TIGR02211 141 E-----LSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLE 213 (221)
T ss_pred h-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEE
Confidence 6 99999999999999999999999999999999999999999999987655678888777654 55 45899999
Q ss_pred EcCCeEE
Q 000628 417 LSEGQIV 423 (1383)
Q Consensus 417 L~~G~iv 423 (1383)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999975
No 337
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-34 Score=317.46 Aligned_cols=225 Identities=22% Similarity=0.341 Sum_probs=180.1
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC-C-c-eEEEEEEEcCc
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G-G-YIEGDIKISGY 931 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~-~-g-~~~G~i~i~g~ 931 (1383)
++.+|++.++... .+..++++||||++++||++||+|.|||||||+.++|.|... + + ..+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 3566766554321 123579999999999999999999999999999999999654 2 3 45689999998
Q ss_pred cC---Chhc---cc-ceEEEEccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCC
Q 000628 932 PK---NQET---FA-RVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLP 1002 (1383)
Q Consensus 932 ~~---~~~~---~~-~~~gyv~Q~~~--~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~ 1002 (1383)
++ +.+. +| +.++|++|++. +.|.+||.+-+.-......... .+++..+++.++|+.+++.+-....-.-
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~Y- 150 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKSY- 150 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhhC-
Confidence 64 2222 22 57999999974 7789999887765544332111 3456677899999999998643222111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+.+|||||||||.||.||+.+|++||.||||++||...+++|+++|+++.+ .|.|+|++|||+. -+.+.||++++|.
T Consensus 151 -PhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY 228 (316)
T COG0444 151 -PHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY 228 (316)
T ss_pred -CcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE
Confidence 568999999999999999999999999999999999999999999999986 5999999999987 4888999999998
Q ss_pred cCcEEEEecCCC
Q 000628 1082 RGGRVIYAGPLG 1093 (1383)
Q Consensus 1082 ~gG~~~~~g~~~ 1093 (1383)
.|++++.|+..
T Consensus 229 -aG~iVE~g~~~ 239 (316)
T COG0444 229 -AGRIVEEGPVE 239 (316)
T ss_pred -CcEEEEeCCHH
Confidence 58999999963
No 338
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.4e-35 Score=337.58 Aligned_cols=212 Identities=25% Similarity=0.400 Sum_probs=175.7
Q ss_pred CCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000628 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1383)
Q Consensus 851 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1383)
.+..++|+|+++++. +++++|++|||+|++||.+||+|+|||||||++++|.+..+ .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 345699999998774 23459999999999999999999999999999999998654 379999999
Q ss_pred ccCC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------cccccc
Q 000628 931 YPKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVG 1000 (1383)
Q Consensus 931 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g 1000 (1383)
.+++ .+.+|+.|||||||..++. -||.+|+.|+. .+.+.+ .|-++.+..++.+. .++.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 9864 4668899999999888765 59999999863 233332 34555666666543 344466
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEE
Q 000628 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1383)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1080 (1383)
..| ..|||||||||+||||++.+|+|+++|||||.||..+++.+++.+.+. ..|+|+|++.|+. +....||+|+++
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEE
Confidence 544 459999999999999999999999999999999999999999999994 3699999999985 578899999999
Q ss_pred ecCcEEEEecCC
Q 000628 1081 KRGGRVIYAGPL 1092 (1383)
Q Consensus 1081 ~~gG~~~~~g~~ 1092 (1383)
++ |++.+.|+.
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 86 789998885
No 339
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=324.52 Aligned_cols=216 Identities=22% Similarity=0.306 Sum_probs=175.7
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc-e--EEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--IEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g-~--~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 467888876542 245999999999999999999999999999999999965421 1 479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+... ...++.++|++|++.+++ .||+||+.+....+. .....+.++.++++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 234567999999998887 899999987654331 1122334456788899998842 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 457999999999999999999999999999999999999999999999865 699999999986 6778899999997
Q ss_pred c----CcEEEEecCC
Q 000628 1082 R----GGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~----gG~~~~~g~~ 1092 (1383)
. +|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999885
No 340
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=329.19 Aligned_cols=204 Identities=25% Similarity=0.359 Sum_probs=170.4
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC----CcceEEEecCCCC-CCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHDL-HHG 258 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~~~-~~~ 258 (1383)
..+|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 35999999999999999999999999999999999999887 999999999886432 1357999999975 466
Q ss_pred CCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCc
Q 000628 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1383)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1383)
..||.||+.|.....+.. +. + ....++.+++.+||++..++.+++
T Consensus 92 ~~tv~enl~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gl~~~~~~~~~~- 136 (274)
T PRK13644 92 GRTVEEDLAFGPENLCLP----------PI----------E--------------IRKRVDRALAEIGLEKYRHRSPKT- 136 (274)
T ss_pred cchHHHHHHhhHHHcCCC----------HH----------H--------------HHHHHHHHHHHCCCHHHhcCCccc-
Confidence 789999998864322110 00 0 011356678899999888888876
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++.|++. ++ ..+|+|++|+
T Consensus 137 ----LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~~tH~~~-~~-~~~d~v~~l~ 209 (274)
T PRK13644 137 ----LSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-KGKTIVYITHNLE-EL-HDADRIIVMD 209 (274)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEEecCHH-HH-hhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 4778777776654 55 6799999999
Q ss_pred CCeEEEecChhHHH
Q 000628 419 EGQIVYQGPRDNVL 432 (1383)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1383)
+|++++.|+.+++.
T Consensus 210 ~G~i~~~g~~~~~~ 223 (274)
T PRK13644 210 RGKIVLEGEPENVL 223 (274)
T ss_pred CCEEEEECCHHHHh
Confidence 99999999988764
No 341
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-34 Score=322.59 Aligned_cols=215 Identities=24% Similarity=0.342 Sum_probs=173.3
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367788776542 23599999999999999999999999999999999996431 12479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...++.++.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87542 234567999999988887 8999999886533211 122334556788899988743 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|++++|.
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999986 4899999999975 5677899999998
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 5 889888874
No 342
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=356.69 Aligned_cols=219 Identities=26% Similarity=0.345 Sum_probs=181.9
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++ ++.+|+|+||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67788776542 34699999999999999999999999999999999997653 4799999998753
Q ss_pred h----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 935 Q----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 935 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
. ...++.++|++|++.+++.+||+||+.+....+.. ......+.++.++++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 2 11245699999999999999999999886432111 11123334456889999999988777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
||||||+||++|+.+|++|||||||+|||+.++..+++.|+++++.|.|||++||+++ ++...||++++|.+ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999976 56778999999985 899999
Q ss_pred cCCCcc
Q 000628 1090 GPLGHE 1095 (1383)
Q Consensus 1090 g~~~~~ 1095 (1383)
|+..+.
T Consensus 223 ~~~~~~ 228 (501)
T PRK10762 223 REVADL 228 (501)
T ss_pred cCcCcC
Confidence 887643
No 343
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=5.5e-34 Score=310.12 Aligned_cols=190 Identities=52% Similarity=0.874 Sum_probs=160.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCC--CCceEEEEEEEcCc
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYIEGDIKISGY 931 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~--~~g~~~G~i~i~g~ 931 (1383)
.++++|+++.++... +...+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 467888887653110 001246999999999999999999999999999999999976 5 45899999998
Q ss_pred cCChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000628 932 PKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQ 1011 (1383)
Q Consensus 932 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGq 1011 (1383)
+......++.++|++|++.+++.+|++||+.+...+. .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8755455678999999999999999999997643110 499999
Q ss_pred HHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1012 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1012 rqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
|||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|.+ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999877999999999986457778999999985 7887654
No 344
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-34 Score=332.09 Aligned_cols=220 Identities=21% Similarity=0.289 Sum_probs=176.7
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1383)
.++++|+++.+.. +.+.+|+|||++|++||++||+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 5789998876531 124599999999999999999999999999999999996531 23479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCc-HHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVD-TKKRKMFVDEVMELVELKSLNDSMVGLPGV 1004 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~-~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~ 1004 (1383)
.++.. ..+++.++||+|++.+++ .|++||+.|..... ... .+..++.++++++.++|.+-.+..++. ..
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~ 223 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDK-AG 223 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhC-Cc
Confidence 98742 245678999999998875 79999999864321 112 222334577888998875432233332 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCc
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1084 (1383)
.+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||+++ .+.+.+|++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 58999999999999999999999999999999999999999999999875 799999999975 45667999999985 8
Q ss_pred EEEEecCC
Q 000628 1085 RVIYAGPL 1092 (1383)
Q Consensus 1085 ~~~~~g~~ 1092 (1383)
++++.|++
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 99999986
No 345
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=7.3e-34 Score=322.58 Aligned_cols=206 Identities=24% Similarity=0.349 Sum_probs=171.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC----------------CcceE
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----------------PQRTC 247 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----------------~~~~~ 247 (1383)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 36999999999999999999999999999999999999887 999999999875321 24679
Q ss_pred EEecCCCCCCCCCCHHHHHHHhhhc-cCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcC
Q 000628 248 AYISQHDLHHGEMTVRETLDFSGRC-LGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILG 326 (1383)
Q Consensus 248 ~yv~Q~~~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 326 (1383)
+|++|++.+++.+||.||+.++... .+.. ..+ ....++.+++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~--------------------~~~--------------~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA--------------------RAE--------------AEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC--------------------HHH--------------HHHHHHHHHHHcC
Confidence 9999999999999999999875211 0000 000 0112456788999
Q ss_pred CcccccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcch
Q 000628 327 LDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPE 406 (1383)
Q Consensus 327 L~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~ 406 (1383)
|++..+..+.+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .+
T Consensus 136 l~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~-~~ 209 (252)
T TIGR03005 136 LADKADHMPAQ-----LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEM-GF 209 (252)
T ss_pred ChhHhhcChhh-----cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCH-HH
Confidence 98877777665 9999999999999999999999999999999999999999999998765567777776655 47
Q ss_pred HHhhcCeEEEEcCCeEEEecChhHHH
Q 000628 407 TYDLFDDIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 407 ~~~~~D~i~lL~~G~iv~~G~~~~~~ 432 (1383)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 88899999999999999999988764
No 346
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=321.41 Aligned_cols=203 Identities=26% Similarity=0.414 Sum_probs=166.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999999887 9999999998765432 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHc-CCcccccccccCc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKIL-GLDICADTMVGDE 338 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 338 (1383)
+||+||+.++..... . + .. ...++.+++.+ +|.+..++.+++
T Consensus 95 ~tv~~~l~~~~~~~~---~-~------------------~~--------------~~~~~~~l~~~~~l~~~~~~~~~~- 137 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R-D------------------QF--------------QERIKWVYELFPRLHERRIQRAGT- 137 (237)
T ss_pred CcHHHHHHHhhhccC---h-h------------------HH--------------HHHHHHHHHHHHHHHHHHhCchhh-
Confidence 999999987532110 0 0 00 00123345555 466555666655
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|+ ..++.+++|++++|+
T Consensus 138 ----LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~tiii~sH~-~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 138 ----MSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQ-GMTIFLVEQN-ANQALKLADRGYVLE 211 (237)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHC-CCEEEEEeCc-HHHHHhhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999998763 6777776654 457889999999999
Q ss_pred CCeEEEecChhHHH
Q 000628 419 EGQIVYQGPRDNVL 432 (1383)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1383)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999998774
No 347
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=6e-34 Score=337.35 Aligned_cols=199 Identities=26% Similarity=0.438 Sum_probs=170.5
Q ss_pred eeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-------CCcceEEEecCCCCCCCCCC
Q 000628 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~~~~~~lT 261 (1383)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999999987 99999999987532 12467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.|+.+.... . + ....++.+++.+||++..++.+.+
T Consensus 92 v~enl~~~~~~~~~------------~----------~--------------~~~~~~~~l~~~gL~~~~~~~~~~---- 131 (354)
T TIGR02142 92 VRGNLRYGMKRARP------------S----------E--------------RRISFERVIELLGIGHLLGRLPGR---- 131 (354)
T ss_pred HHHHHHHHhhccCh------------h----------H--------------HHHHHHHHHHHcCChhHhcCChhh----
Confidence 99999886431100 0 0 011346688899999888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++..++|+|++|++|+
T Consensus 132 -LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~-~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 132 -LSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSL-QEVLRLADRVVVLEDGR 209 (354)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999999875567777776554 57889999999999999
Q ss_pred EEEecChhHHH
Q 000628 422 IVYQGPRDNVL 432 (1383)
Q Consensus 422 iv~~G~~~~~~ 432 (1383)
++..|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999998874
No 348
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=324.24 Aligned_cols=207 Identities=22% Similarity=0.310 Sum_probs=166.4
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--Cc-eEEEEEEEcCccCCh-----hcccceEEEEccCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIH 951 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~ 951 (1383)
+.+|+|+||+|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|.+... ...++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999743 11 247999999986532 1346679999999988
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000628 952 SPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1383)
Q Consensus 952 ~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1383)
++. ||.||+.+....+. ........++.++++++.++|.+........ .+..||||||||++|||+|+.+|++|+||
T Consensus 98 ~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~Gq~qrv~laral~~~p~llllD 174 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFELSGGQQQRLCIARAIAVKPTMLLMD 174 (251)
T ss_pred ccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 875 99999987643321 1112233445678899999986521111111 14579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1032 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 175 EPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (251)
T PRK14244 175 EPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIVEYNTT 232 (251)
T ss_pred CCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999985 4899999999976 56678999999985 899988874
No 349
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.4e-34 Score=319.11 Aligned_cols=196 Identities=24% Similarity=0.322 Sum_probs=163.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 257 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 46999999999999999999999999999999999999887 999999999875432 235799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+||+||+.+.....+... .+ ....++..++.+||++..++.+++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 137 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG--------------------DD--------------IRRRVSAALDKVGLLDKAKNFPIQ 137 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH--------------------HH--------------HHHHHHHHHHHcCChhhhhCCchh
Confidence 89999999988543221100 00 011245578889998877777766
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++. +.|++++.|+ ..++...+|+|++|
T Consensus 138 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~tiii~sH~-~~~~~~~~d~i~~l 210 (222)
T PRK10908 138 -----LSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRV-GVTVLMATHD-IGLISRRSYRMLTL 210 (222)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC-CCEEEEEeCC-HHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998653 5676666554 45788899999999
Q ss_pred cCCeEE
Q 000628 418 SEGQIV 423 (1383)
Q Consensus 418 ~~G~iv 423 (1383)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 350
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=7.2e-34 Score=321.63 Aligned_cols=206 Identities=22% Similarity=0.357 Sum_probs=168.3
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCC-----CCcceEEEecCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 257 (1383)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5899999999999999999999999999999999999763 12379999999987542 1246799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc----ccccc
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICADT 333 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 333 (1383)
+ +||+||+.+..+..+... ..+ ....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKD-------------------KKE--------------LDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCC-------------------HHH--------------HHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 999999988643221000 000 011345678889997 56666
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|+ ..++.+++|+
T Consensus 141 ~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivsH~-~~~~~~~~d~ 212 (247)
T TIGR00972 141 SALG-----LSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--KYTIVIVTHN-MQQAARISDR 212 (247)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCeEEEEecC-HHHHHHhCCE
Confidence 6665 999999999999999999999999999999999999999999999876 3666666654 4578899999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
|++|++|++++.|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 351
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-34 Score=321.98 Aligned_cols=214 Identities=24% Similarity=0.358 Sum_probs=173.7
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISGY 931 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g~ 931 (1383)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67788776542 246999999999999999999999999999999999965321 25799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc----ccccccCC
Q 000628 932 PKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL----NDSMVGLP 1002 (1383)
Q Consensus 932 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~~g~~ 1002 (1383)
+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+. .+..
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 143 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNKP---- 143 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhCC----
Confidence 7532 234567999999998887 899999987653321 11223344567888999988542 2333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
+.+||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.+|++++|.+
T Consensus 144 -~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~ 220 (250)
T PRK14262 144 -GTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR 220 (250)
T ss_pred -hhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 458999999999999999999999999999999999999999999999865 799999999975 56788999999985
Q ss_pred CcEEEEecCC
Q 000628 1083 GGRVIYAGPL 1092 (1383)
Q Consensus 1083 gG~~~~~g~~ 1092 (1383)
|+++..|+.
T Consensus 221 -G~i~~~g~~ 229 (250)
T PRK14262 221 -GELIEYGPT 229 (250)
T ss_pred -CEEEEecCH
Confidence 789888874
No 352
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.4e-34 Score=390.13 Aligned_cols=213 Identities=26% Similarity=0.404 Sum_probs=175.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC---------------------------------------
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--------------------------------------- 224 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--------------------------------------- 224 (1383)
.+||+|+|++|+||+.+||+||||||||||+++|+|+++|.
T Consensus 1181 ~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 (1466)
T PTZ00265 1181 VPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSL 1260 (1466)
T ss_pred CccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999999972
Q ss_pred ------------CCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHH
Q 000628 225 ------------LRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRRE 289 (1383)
Q Consensus 225 ------------~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e 289 (1383)
...+|+|++||+++.+... ++.++||+|++.+|+ .||+|||.|+..
T Consensus 1261 ~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIreNI~~g~~------------------ 1321 (1466)
T PTZ00265 1261 TKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIYENIKFGKE------------------ 1321 (1466)
T ss_pred ccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHHHHHhcCCC------------------
Confidence 0138999999999987653 578999999999985 799999998621
Q ss_pred HhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCC
Q 000628 290 KQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEI 369 (1383)
Q Consensus 290 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEp 369 (1383)
+.+.++..+|+..++.+ +. +..|++.+||.||+ .+..||||||||++|||||+++|+||+||||
T Consensus 1322 -------~at~eeI~~A~k~A~l~-----~f---I~~LP~GydT~VGe-~G~~LSGGQkQRIaIARALlr~p~ILLLDEa 1385 (1466)
T PTZ00265 1322 -------DATREDVKRACKFAAID-----EF---IESLPNKYDTNVGP-YGKSLSGGQKQRIAIARALLREPKILLLDEA 1385 (1466)
T ss_pred -------CCCHHHHHHHHHHcCCH-----HH---HHhCccccCCccCC-CCCcCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 11222333444433321 22 23589999999996 4566999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC----CeEE-EecChhHHHH
Q 000628 370 STGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE----GQIV-YQGPRDNVLE 433 (1383)
Q Consensus 370 tsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~----G~iv-~~G~~~~~~~ 433 (1383)
||+||+.++..|.+.|+++....++|+|++.|+. ++.+.||+|++|++ |+++ ++|+++|+++
T Consensus 1386 TSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRl--sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1386 TSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRI--ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred ccccCHHHHHHHHHHHHHHhccCCCEEEEEechH--HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 9999999999999999987532467888887765 67889999999999 9955 8999999863
No 353
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=7e-34 Score=316.00 Aligned_cols=211 Identities=25% Similarity=0.409 Sum_probs=173.7
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++. +.+.+.+|+||||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~---------~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGH---------GSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccC---------CCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 456777765421 0112569999999999999999999999999999999999765 35799999998753
Q ss_pred h------hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000628 935 Q------ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 935 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1383)
. ...++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 2 1245789999999999999999999988654321 123344556789999999998777766 45799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecCcEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~ 1086 (1383)
+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ..+.+|++++|.+ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999974 5678999999975 654
No 354
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=321.50 Aligned_cols=206 Identities=20% Similarity=0.300 Sum_probs=164.6
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CceeEEEECCeeCCCC-----CCcceEEEecCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 257 (1383)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 58999999999999999999999999999999999998631 1389999999986421 1246799999998887
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCC----cccccc
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGL----DICADT 333 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL----~~~~dt 333 (1383)
+ +||+||+.|+....+.... .+ ....++..++.+|| ++..++
T Consensus 101 ~-~tv~eni~~~~~~~~~~~~-------------------~~--------------~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKDK-------------------KK--------------LDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCCH-------------------HH--------------HHHHHHHHHHHhCCchhhHHHHhC
Confidence 5 8999999886432211000 00 01123456667776 344566
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+++ |||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|+ ..++.+++|+
T Consensus 147 ~~~~-----LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tvii~sH~-~~~~~~~~d~ 218 (254)
T PRK14273 147 NALS-----LSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--SYTIIIVTHN-MQQAGRISDR 218 (254)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--CCEEEEEeCC-HHHHHHhCCE
Confidence 6655 999999999999999999999999999999999999999999999864 5676666655 4578889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
|++|++|+++..|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999998874
No 355
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-34 Score=321.76 Aligned_cols=215 Identities=25% Similarity=0.293 Sum_probs=173.2
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 356777776542 246999999999999999999999999999999999975421 2479999999
Q ss_pred ccCC----hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000628 931 YPKN----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGLP 1002 (1383)
Q Consensus 931 ~~~~----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~~ 1002 (1383)
.+.. ....++.++|++|++.+++ .||.||+.+...... ....+..++.+.++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 142 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKSH---- 142 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhcC----
Confidence 8753 1234567999999998887 899999987643221 1112334456788888888753 22332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
+..|||||||||+|||+|+.+|+||||||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.+
T Consensus 143 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~ 219 (249)
T PRK14253 143 -AFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM 219 (249)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999875 699999999976 57778999999985
Q ss_pred CcEEEEecCC
Q 000628 1083 GGRVIYAGPL 1092 (1383)
Q Consensus 1083 gG~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 220 -G~i~~~g~~ 228 (249)
T PRK14253 220 -GELVEHDDT 228 (249)
T ss_pred -CEEEEeCCH
Confidence 899988874
No 356
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=5.6e-34 Score=325.58 Aligned_cols=208 Identities=23% Similarity=0.325 Sum_probs=170.6
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCC--
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHD-- 254 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~-- 254 (1383)
.+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999987 999999999876432 235699999996
Q ss_pred CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccc
Q 000628 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1383)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 333 (1383)
.+++.+||+||+.+...... +..+ + .....++.+++.+||+ +..+.
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~------------------~~~~--~-------------~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLT------------------SLDE--S-------------EQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhc------------------CCCH--H-------------HHHHHHHHHHHHcCCChhhhhC
Confidence 46678999999976432100 0000 0 0012345678899996 56677
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|+ ...+.+++|+
T Consensus 147 ~~~~-----LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~-~~~~~~~~d~ 220 (265)
T TIGR02769 147 LPRQ-----LSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHD-LRLVQSFCQR 220 (265)
T ss_pred Chhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCC-HHHHHHHhcE
Confidence 7665 999999999999999999999999999999999999999999999876546777777655 4577789999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998874
No 357
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=5.4e-34 Score=317.34 Aligned_cols=195 Identities=27% Similarity=0.366 Sum_probs=160.8
Q ss_pred cccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCC
Q 000628 875 VGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPY 954 (1383)
Q Consensus 875 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ 954 (1383)
..++++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.
T Consensus 30 ~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~ 98 (224)
T cd03220 30 GEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPE 98 (224)
T ss_pred hhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCC
Confidence 34456789999999999999999999999999999999999765 347999999976421 1112344577
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000628 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1383)
Q Consensus 955 lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1383)
+||+||+.+....+ .....+.++.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+|||||
T Consensus 99 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~ 170 (224)
T cd03220 99 LTGRENIYLNGRLL---GLSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVL 170 (224)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 99999998765432 1223344556788999999988777764 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 171 ~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 171 AVGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999877899999999975 56678999999975 7887654
No 358
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-34 Score=323.50 Aligned_cols=206 Identities=30% Similarity=0.468 Sum_probs=171.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999999887 8999999998754322 35699999999888889
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||+||+.+.....+.. . .+ ....++.+++.+||++..++.+++
T Consensus 92 tv~e~l~~~~~~~~~~-------------------~-~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 134 (258)
T PRK13548 92 TVEEVVAMGRAPHGLS-------------------R-AE--------------DDALVAAALAQVDLAHLAGRDYPQ--- 134 (258)
T ss_pred CHHHHHHhhhcccCCC-------------------c-HH--------------HHHHHHHHHHHcCCHhHhcCCccc---
Confidence 9999998753211100 0 00 011245678889998878888876
Q ss_pred CCCChHHHHHHHHHHHHh------cCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 341 RGISGGQKKRVTTGEMLV------GTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~------~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
|||||||||+||+||+ .+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+ ..++.+++|+|
T Consensus 135 --LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~-~~~~~~~~d~i 211 (258)
T PRK13548 135 --LSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHD-LNLAARYADRI 211 (258)
T ss_pred --CCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECC-HHHHHHhcCEE
Confidence 9999999999999999 59999999999999999999999999999874456777777655 45788899999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000628 415 ILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1383)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999988764
No 359
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-34 Score=331.14 Aligned_cols=208 Identities=20% Similarity=0.245 Sum_probs=173.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCC--C
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHD--L 255 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~--~ 255 (1383)
+.+|+|||++|++||+++|+|+||||||||+++|+|.++++ +|+|.++|.++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 57999999999999999999999999999999999999886 899999999886542 245799999997 5
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-cccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 334 (1383)
+.+.+||.+++.+..+..... .+. +....+..+++.+||+ ...++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~---------~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSL---------SAA------------------------ERREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccCC---------CHH------------------------HHHHHHHHHHHHCCCChHHhcCC
Confidence 888999999997653321100 000 0112356788999996 466777
Q ss_pred ccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
+++ |||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+..+.|++++. |....+.+++|+|
T Consensus 152 p~~-----LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iT-Hdl~~~~~~adrv 225 (327)
T PRK11308 152 PHM-----FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFIS-HDLSVVEHIADEV 225 (327)
T ss_pred Ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEe-CCHHHHHHhCCEE
Confidence 766 9999999999999999999999999999999999999999999999876666766655 5556788899999
Q ss_pred EEEcCCeEEEecChhHHHH
Q 000628 415 ILLSEGQIVYQGPRDNVLE 433 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~~ 433 (1383)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988853
No 360
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.1e-32 Score=353.52 Aligned_cols=123 Identities=24% Similarity=0.318 Sum_probs=100.6
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCCce
Q 000628 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELVA---NPSIIF 1029 (1383)
Q Consensus 954 ~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~ia~aL~~---~p~ill 1029 (1383)
.+||.|.+.|...+. .. ....++++.+||... .++. .+.||||||||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 467777777754331 11 124578899999753 3444 45799999999999999997 599999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe-----cCcEEEEecCC
Q 000628 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-----RGGRVIYAGPL 1092 (1383)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-----~gG~~~~~g~~ 1092 (1383)
|||||+|||+.....+++.|+++.++|.|||+++|+++ ....+|+++.|. ++|++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 456799999994 57999999985
No 361
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=5.3e-34 Score=318.89 Aligned_cols=202 Identities=27% Similarity=0.322 Sum_probs=167.0
Q ss_pred eeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHHHHH
Q 000628 187 LKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVRETL 266 (1383)
Q Consensus 187 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l 266 (1383)
|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999887 9999999998765432 348999999999999999999
Q ss_pred HHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChH
Q 000628 267 DFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGG 346 (1383)
Q Consensus 267 ~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGG 346 (1383)
.+.......+ .... +....++.+++.+||++..++.+++ ||||
T Consensus 76 ~~~~~~~~~~--------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--------LSKS------------------------ERRAIVEEHIALVGLTEAADKRPGQ-----LSGG 118 (230)
T ss_pred HHHHHhcccC--------CCHH------------------------HHHHHHHHHHHHcCCHHHHcCChhh-----CCHH
Confidence 8752100000 0000 0011245678899999888888776 9999
Q ss_pred HHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEEec
Q 000628 347 QKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQG 426 (1383)
Q Consensus 347 qkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G 426 (1383)
|||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVTHDV-DEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999998765567777776654 4788999999999999999988
Q ss_pred ChhHH
Q 000628 427 PRDNV 431 (1383)
Q Consensus 427 ~~~~~ 431 (1383)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 66543
No 362
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=8.5e-34 Score=322.17 Aligned_cols=214 Identities=21% Similarity=0.274 Sum_probs=173.3
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC--ceEEEEEEEcC
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYIEGDIKISG 930 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g~~~G~i~i~g 930 (1383)
..++++|+++.+ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~--------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQA--------------AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEe--------------ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 357888888654 13599999999999999999999999999999999997653 11579999999
Q ss_pred ccCChhcc-cceEEEEccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc---cccccccCCCC
Q 000628 931 YPKNQETF-ARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS---LNDSMVGLPGV 1004 (1383)
Q Consensus 931 ~~~~~~~~-~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~~g~~~~ 1004 (1383)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... ... .++.++++++.++|.+ ..++. +
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87643323 357999999974 4466899999876543221 111 2256789999999976 23444 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecC
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1083 (1383)
..|||||||||+|||+|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999975 46678999999975
Q ss_pred cEEEEecCC
Q 000628 1084 GRVIYAGPL 1092 (1383)
Q Consensus 1084 G~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 899988875
No 363
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=5.2e-34 Score=319.17 Aligned_cols=204 Identities=23% Similarity=0.293 Sum_probs=167.4
Q ss_pred eeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC----CCCceeEEEECCeeCCCCCC-cceEEEecCCCC--CCC
Q 000628 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGK----DLRASGKITYCGHELNEFVP-QRTCAYISQHDL--HHG 258 (1383)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~--~~~ 258 (1383)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999987 5 8999999998765433 257999999984 556
Q ss_pred CCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc---ccccccc
Q 000628 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD---ICADTMV 335 (1383)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~---~~~dt~v 335 (1383)
.+|+.|++.+.....+.. . . +....++.+++.+||+ +..++.+
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~-----------~--------------~~~~~~~~~l~~~~l~~~~~~~~~~~ 123 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------S-----------K--------------QARALILEALEAVGLPDPEEVLKKYP 123 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------H-----------H--------------HHHHHHHHHHHHcCCCchHHHHhCCh
Confidence 789999997753221100 0 0 0012356688899998 3456666
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
++ |||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++++..+.|+|++.|++ .++..++|+|+
T Consensus 124 ~~-----LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~ 197 (230)
T TIGR02770 124 FQ-----LSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDL-GVVARIADEVA 197 (230)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEE
Confidence 55 9999999999999999999999999999999999999999999998764466777776654 47888999999
Q ss_pred EEcCCeEEEecChhHHH
Q 000628 416 LLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1383)
+|++|+++..|+.+++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988774
No 364
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-34 Score=329.32 Aligned_cols=205 Identities=22% Similarity=0.331 Sum_probs=168.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-------CCcceEEEecCCCC-
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-------VPQRTCAYISQHDL- 255 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~~~- 255 (1383)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999997 99999999987532 11357999999962
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-cccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 334 (1383)
.+..+||+||+.|+....+.. .. + ....++.+++.+||+ +..++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------ED----------E--------------AKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCChhHhhCC
Confidence 333689999998854321110 00 0 011356688899997 567787
Q ss_pred ccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|++++. |...++.++||+|
T Consensus 143 ~~~-----LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~g~tvlivs-H~~~~~~~~~d~v 215 (287)
T PRK13641 143 PFE-----LSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-AGHTVILVT-HNMDDVAEYADDV 215 (287)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEe-CCHHHHHHhCCEE
Confidence 776 999999999999999999999999999999999999999999999865 366766665 4556888999999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000628 415 ILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1383)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 365
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=8.1e-34 Score=323.25 Aligned_cols=215 Identities=25% Similarity=0.305 Sum_probs=173.4
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc-
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP- 932 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~- 932 (1383)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 367888876542 2469999999999999999999999999999999999765 347999999986
Q ss_pred ----CCh---hc----ccceEEEEccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc-ccccc
Q 000628 933 ----KNQ---ET----FARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS-LNDSM 998 (1383)
Q Consensus 933 ----~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 998 (1383)
+.. .. .++.++|++|++. +.+.+|+.||+.+...... .....+....+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 432 11 2346999999974 5677899999976432211 1112234556789999999963 44544
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceE
Q 000628 999 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1077 (1383)
Q Consensus 999 ~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~ 1077 (1383)
+..||||||||++|||+|+.+|+||+|||||+|||+.+...+++.|++++++ |.|||++||+++ .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998765 899999999975 455689999
Q ss_pred EEEecCcEEEEecCC
Q 000628 1078 LLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1078 ~~l~~gG~~~~~g~~ 1092 (1383)
++|.+ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99975 899998875
No 366
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=356.61 Aligned_cols=219 Identities=26% Similarity=0.329 Sum_probs=180.8
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEEC
Confidence 367888876542 34699999999999999999999999999999999997653 479999999875
Q ss_pred Chh----cccceEEEEccCCCCCCCCCHHHHHHHHHHhh----cCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000628 934 NQE----TFARVSGYCEQNDIHSPYVTVYESLLYSAWLR----LSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1383)
Q Consensus 934 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1383)
... ..++.+||++|++.+++.+||+||+.+..... .......++..++++++++.++|.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 321 12356999999999999999999998753211 0000122334566889999999988777764 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
+|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||++||+++ ++...||++++|.+ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999888999999999975 56678999999985 89
Q ss_pred EEEecCCCc
Q 000628 1086 VIYAGPLGH 1094 (1383)
Q Consensus 1086 ~~~~g~~~~ 1094 (1383)
+++.|+..+
T Consensus 223 i~~~g~~~~ 231 (510)
T PRK09700 223 SVCSGMVSD 231 (510)
T ss_pred Eeeecchhh
Confidence 999988754
No 367
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=323.77 Aligned_cols=216 Identities=24% Similarity=0.313 Sum_probs=175.7
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC---ceEEEEEEEc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKIS 929 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~ 929 (1383)
..++++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|.... .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3578899887652 24699999999999999999999999999999999997542 1357999999
Q ss_pred CccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000628 930 GYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVG 1000 (1383)
Q Consensus 930 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g 1000 (1383)
|.+... ..+++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+ ..+..
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 165 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHEN-- 165 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhCC--
Confidence 987532 2346789999999988886 99999987643321 1112233456788999998853 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEE
Q 000628 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1383)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1080 (1383)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||++||+++ ++.+.+|++++|
T Consensus 166 ---~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 240 (272)
T PRK14236 166 ---AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFM 240 (272)
T ss_pred ---cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999975 799999999975 566789999999
Q ss_pred ecCcEEEEecCC
Q 000628 1081 KRGGRVIYAGPL 1092 (1383)
Q Consensus 1081 ~~gG~~~~~g~~ 1092 (1383)
.+ |++++.|+.
T Consensus 241 ~~-G~i~~~g~~ 251 (272)
T PRK14236 241 YM-GKLVEYGDT 251 (272)
T ss_pred EC-CEEEecCCH
Confidence 85 899998875
No 368
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-34 Score=315.86 Aligned_cols=197 Identities=32% Similarity=0.463 Sum_probs=164.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--CcceEEEecCCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--PQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 261 (1383)
.++|+|+|+++++| +++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 36999999999999 99999999999999999999999987 999999998775432 2467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.+.....+.. + .+ ....++.+++.+||++..++.+++
T Consensus 89 v~~~l~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~---- 130 (211)
T cd03264 89 VREFLDYIAWLKGIP----------S----------KE--------------VKARVDEVLELVNLGDRAKKKIGS---- 130 (211)
T ss_pred HHHHHHHHHHHhCCC----------H----------HH--------------HHHHHHHHHHHCCCHHHHhCchhh----
Confidence 999998754322110 0 00 011346678899998888888876
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++.++.+.|+++++ +.|+|++.| ...++.+++|++++|++|+
T Consensus 131 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~vsH-~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 131 -LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--DRIVILSTH-IVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEcC-CHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999875 466666654 4457778999999999999
Q ss_pred EEEec
Q 000628 422 IVYQG 426 (1383)
Q Consensus 422 iv~~G 426 (1383)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 369
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.69 Aligned_cols=221 Identities=22% Similarity=0.293 Sum_probs=176.1
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1383)
.++++|+++.++ +..+|+|+|+++++||+++|+|+||||||||+++|+|...+. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478888887652 235999999999999999999999999999999999975431 1368999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1383)
.+... ...++.++|++|++.+++ .|++||+.+...... .....+..+.+.++++.+++.+..+.... ..+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIH-KSAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhc-CCcc
Confidence 87521 234567999999988888 899999987643221 01223334567899999998542211111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEecC-
Q 000628 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLKRG- 1083 (1383)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~~g- 1083 (1383)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||+++ ++.+.+|++++|+++
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999986 577889999999853
Q ss_pred ---cEEEEecCC
Q 000628 1084 ---GRVIYAGPL 1092 (1383)
Q Consensus 1084 ---G~~~~~g~~ 1092 (1383)
|++++.|++
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999885
No 370
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=321.10 Aligned_cols=216 Identities=23% Similarity=0.293 Sum_probs=173.2
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCce---EEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---IEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~---~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|...+.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 466777776542 2469999999999999999999999999999999999754321 379999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+... ...++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87532 2345679999999999999999999987543221 1122333455677777777642 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999976 5667899999998
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 789998875
No 371
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-33 Score=323.77 Aligned_cols=208 Identities=25% Similarity=0.328 Sum_probs=171.6
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCC-CCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGEM 260 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~l 260 (1383)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++. .++.+
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 5899999999999999999999999999999999999886212399999999886432 2357999999974 57789
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||.||+.|..+..+.. .. +....++.+++.+||++..++.+.+
T Consensus 101 tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~~--- 143 (282)
T PRK13640 101 TVGDDVAFGLENRAVP----------RP------------------------EMIKIVRDVLADVGMLDYIDSEPAN--- 143 (282)
T ss_pred CHHHHHHhhHHhCCCC----------HH------------------------HHHHHHHHHHHHCCChhHhcCCccc---
Confidence 9999998753321110 00 0112356678899999888887765
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++ ..||++++|++|
T Consensus 144 --LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~G 219 (282)
T PRK13640 144 --LSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDDG 219 (282)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999987655778888877664 45 579999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
++++.|+++++.+
T Consensus 220 ~i~~~g~~~~~~~ 232 (282)
T PRK13640 220 KLLAQGSPVEIFS 232 (282)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999988753
No 372
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=324.03 Aligned_cols=219 Identities=25% Similarity=0.301 Sum_probs=176.2
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|||++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 468888887653 34699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCh----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000628 931 YPKNQ----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1383)
Q Consensus 931 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1383)
.+... ...++.++|++|++.+++ .|++||+.+...... ....++....+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87532 234667999999998887 899999987643221 12333444556788999998643211111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEE
Q 000628 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1383)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~ 1086 (1383)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.+ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999975 56778999999985 899
Q ss_pred EEecCC
Q 000628 1087 IYAGPL 1092 (1383)
Q Consensus 1087 ~~~g~~ 1092 (1383)
++.|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 998885
No 373
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=9.5e-34 Score=315.69 Aligned_cols=198 Identities=27% Similarity=0.362 Sum_probs=169.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 263 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999999887 999999999875422 35799999999999999999
Q ss_pred HHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCC
Q 000628 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1383)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1383)
||+.+.....+. + ...++.+++.+||++..|..+++ |
T Consensus 89 ~~~~~~~~~~~~---------------------~-----------------~~~~~~~l~~~~l~~~~~~~~~~-----L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL---------------------P-----------------DSRIDEVLNIVDLTNTGKKKAKQ-----F 125 (223)
T ss_pred HHHHHHHHHcCC---------------------C-----------------HHHHHHHHHHcCCcHHHhhhHhh-----C
Confidence 999875332110 0 01245578889999888887776 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEE
Q 000628 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIV 423 (1383)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv 423 (1383)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++.|++ .++.+.+|+|++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~tiii~sH~~-~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGITVILSSHIL-SEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEcCCH-HHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999865 367777777665 4788899999999999999
Q ss_pred EecChhH
Q 000628 424 YQGPRDN 430 (1383)
Q Consensus 424 ~~G~~~~ 430 (1383)
+.|+..+
T Consensus 204 ~~~~~~~ 210 (223)
T TIGR03740 204 YQGKINK 210 (223)
T ss_pred EecChhh
Confidence 9998653
No 374
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=322.05 Aligned_cols=221 Identities=22% Similarity=0.292 Sum_probs=173.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999999987 9999999998765332 2358999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.++....... +....+... ....+ .. .+....++..++.+||++..++.+++
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~~~---~~~~~--~~-----------~~~~~~~~~~l~~~gl~~~~~~~~~~-- 153 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLLKT---PAFRR--AE-----------SEALDRAATWLERVGLLEHANRQAGN-- 153 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhccc---ccccc--ch-----------hHHHHHHHHHHHhCChhhhhhCChhh--
Confidence 99999999863211000 000000000 00000 00 00112356678899998878888776
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+ ..++.+++|++++|++
T Consensus 154 ---LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~-~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 154 ---LAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHD-MKLVMGISDRIYVVNQ 229 (255)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCC-HHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999876546777777665 4578899999999999
Q ss_pred CeEEEecChhHHH
Q 000628 420 GQIVYQGPRDNVL 432 (1383)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1383)
|++++.|+.+++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999988764
No 375
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-34 Score=326.53 Aligned_cols=206 Identities=24% Similarity=0.311 Sum_probs=171.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC----CcceEEEecCCCC-CCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV----PQRTCAYISQHDL-HHG 258 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~~~-~~~ 258 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999987 999999999886422 2467999999974 233
Q ss_pred CCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCc
Q 000628 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDE 338 (1383)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 338 (1383)
..||.||+.|+....+.. . .+ ....++.+++.+||++..++.+++
T Consensus 100 ~~~v~~~l~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~gL~~~~~~~~~~- 144 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIP----------P----------EE--------------IRERVDESLKKVGMYEYRRHAPHL- 144 (280)
T ss_pred cccHHHHHHhhHhhcCCC----------H----------HH--------------HHHHHHHHHHHCCCHhHhhCCccc-
Confidence 469999998864322110 0 00 012356788999999888888876
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++.. +|++++|+
T Consensus 145 ----LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~~-~d~v~~l~ 218 (280)
T PRK13633 145 ----LSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAVE-ADRIIVMD 218 (280)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHhc-CCEEEEEE
Confidence 99999999999999999999999999999999999999999999997655778888877665 5544 99999999
Q ss_pred CCeEEEecChhHHHH
Q 000628 419 EGQIVYQGPRDNVLE 433 (1383)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1383)
+|++++.|+++++..
T Consensus 219 ~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 219 SGKVVMEGTPKEIFK 233 (280)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999988753
No 376
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-33 Score=319.05 Aligned_cols=212 Identities=25% Similarity=0.370 Sum_probs=172.1
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~~~ 259 (1383)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 36999999999999999999999999999999999999887 9999999998754332 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.+....... .+.... + .. .+ .....++.+++.+||++..++.+++
T Consensus 92 ~tv~~nl~~~~~~~~~--~~~~~~---------~-~~-~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (242)
T TIGR03411 92 LTVFENLELALPRDKS--VFASLF---------F-RL-SA-------------EEKDRIEEVLETIGLADEADRLAGL-- 143 (242)
T ss_pred CCHHHHHHHhhhcccc--cccccc---------c-cc-HH-------------HHHHHHHHHHHHcCCchhhcCChhh--
Confidence 9999999885331100 000000 0 00 00 0112356788899999888888776
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|+ ..++.++||+|++|++
T Consensus 144 ---LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~-~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 144 ---LSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--KHSVVVVEHD-MEFVRSIADKVTVLHQ 217 (242)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--CCEEEEEECC-HHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999865 5677776655 4578889999999999
Q ss_pred CeEEEecChhHHH
Q 000628 420 GQIVYQGPRDNVL 432 (1383)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1383)
|+++++|+.+++.
T Consensus 218 g~~~~~~~~~~~~ 230 (242)
T TIGR03411 218 GSVLAEGSLDQVQ 230 (242)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999987763
No 377
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-34 Score=325.35 Aligned_cols=205 Identities=28% Similarity=0.391 Sum_probs=169.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-----CcceEEEecCCCC-CC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-----PQRTCAYISQHDL-HH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~~~-~~ 257 (1383)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++. .+
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQL 91 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhh
Confidence 35899999999999999999999999999999999999887 899999999874211 2457999999963 33
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
..+||.||+.++....+.. +.+ ....+..+++.+||++..++.+++
T Consensus 92 ~~~tv~e~i~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~ 137 (275)
T PRK13639 92 FAPTVEEDVAFGPLNLGLS----------KEE------------------------VEKRVKEALKAVGMEGFENKPPHH 137 (275)
T ss_pred ccccHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHCCCchhhcCChhh
Confidence 4579999998753211100 000 011245678899999888888877
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
||||||||++||+|++.+|++++|||||+|||+.++.++.+.|+++++. +.|++++.|+ ..++.++||++++|
T Consensus 138 -----LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~~til~vtH~-~~~~~~~~d~i~~l 210 (275)
T PRK13639 138 -----LSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKE-GITIIISTHD-VDLVPVYADKVYVM 210 (275)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEecC-HHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998763 6777776655 45788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000628 418 SEGQIVYQGPRDNVL 432 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1383)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 211 SDGKIIKEGTPKEVF 225 (275)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998875
No 378
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.4e-33 Score=359.65 Aligned_cols=210 Identities=28% Similarity=0.394 Sum_probs=175.2
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++++|++|.++. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 46899999998742 124699999999999999999999999999999999997663 47999999988
Q ss_pred CC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000628 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1383)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1383)
+. ...+++.+|||+|++.+++ -|++||+.++. .+.+. +.++++++..++.+. .|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 64 3567889999999999875 59999997642 12222 336677777777653 34555544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|++ .++|+|++||+++ ....+|++++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 357999999999999999999999999999999999999999999986 4899999999975 5677999999975
Q ss_pred CcEEEEecCC
Q 000628 1083 GGRVIYAGPL 1092 (1383)
Q Consensus 1083 gG~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 899999985
No 379
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-33 Score=316.60 Aligned_cols=206 Identities=27% Similarity=0.342 Sum_probs=174.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-CcceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-PQRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV 262 (1383)
+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.+.. .++.++|++|++..++.+||
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999987 899999999876533 24679999999999989999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.+.....+.. +. .....++.+++.+||++..++.+.+
T Consensus 90 ~~nl~~~~~~~~~~---------------------~~-------------~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (232)
T cd03300 90 FENIAFGLRLKKLP---------------------KA-------------EIKERVAEALDLVQLEGYANRKPSQ----- 130 (232)
T ss_pred HHHHHHHHHhcCCC---------------------HH-------------HHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99998754322110 00 0011346688899998888887765
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~-~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQ-EEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998765467888877765 467889999999999999
Q ss_pred EEecChhHHH
Q 000628 423 VYQGPRDNVL 432 (1383)
Q Consensus 423 v~~G~~~~~~ 432 (1383)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999887664
No 380
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.3e-34 Score=313.11 Aligned_cols=187 Identities=24% Similarity=0.289 Sum_probs=156.1
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~tv 91 (204)
T PRK13538 14 RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTELTA 91 (204)
T ss_pred EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcccchHHhhhheEEeCCccccCcCCcH
Confidence 469999999999999999999999999999999999765 347999999987532 2345679999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
.||+.+....+. . ..++.++++++.++|.+..++. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 92 ~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 160 (204)
T PRK13538 92 LENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQRRVALARLWLTRAPLWILDEPFTAI 160 (204)
T ss_pred HHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCccC
Confidence 999988654321 1 1234578999999998776665 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEE
Q 000628 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1080 (1383)
|+.++..+++.|++++++|.|||++||+++ ++..+-++++.+
T Consensus 161 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 161 DKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 999999999999999877999999999975 343433444433
No 381
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=319.86 Aligned_cols=206 Identities=22% Similarity=0.315 Sum_probs=162.4
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CCcceEEEecCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 257 (1383)
.+|+|+|+++++|++++|+|||||||||||++|+|.++ +....+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 58999999999999999999999999999999999864 1001389999999987531 1245799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc----cccc
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADT 333 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 333 (1383)
+ .||+||+.++....+.... .. ....++..++.+||.+ ..+.
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~-------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 145 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK-------------------AY--------------LAERVERSLRHAALWDEVKDRLHE 145 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH-------------------HH--------------HHHHHHHHHHHcCCchhhhHHhhC
Confidence 7 5999999886432211000 00 0112345677778753 2344
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.++ .|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|+
T Consensus 146 ~~~-----~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tvii~tH~~-~~~~~~~d~ 217 (253)
T PRK14242 146 SAL-----GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--RYTIIIVTHNM-QQAARVSDV 217 (253)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCeEEEEEecH-HHHHHhCCE
Confidence 444 4999999999999999999999999999999999999999999999854 56777766554 578899999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
|++|++|+++..|+++++.
T Consensus 218 v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 218 TAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988763
No 382
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.1e-34 Score=314.39 Aligned_cols=201 Identities=23% Similarity=0.304 Sum_probs=170.2
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|++..++ ++.+|+++|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 477888876442 24699999999999999999999999999999999997653 479999999876
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000628 934 NQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRK 1013 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrq 1013 (1383)
.....++.++|++|++.+++.+|+.||+.+....+. . ...+.++++++.++|.+..+..+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543345569999999989898999999987654321 1 12234678899999987777663 579999999
Q ss_pred HHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1014 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1014 Rl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
|++||++++.+|++|+|||||+|||+.+++.+.+.|++++++|+|||++||+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999999888999999999986 6778999998885
No 383
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=8.9e-34 Score=322.71 Aligned_cols=205 Identities=23% Similarity=0.310 Sum_probs=168.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC----------------CCcceE
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF----------------VPQRTC 247 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~----------------~~~~~~ 247 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 46999999999999999999999999999999999999887 89999999887421 113579
Q ss_pred EEecCCCCCCCCCCHHHHHHHhhh-ccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcC
Q 000628 248 AYISQHDLHHGEMTVRETLDFSGR-CLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILG 326 (1383)
Q Consensus 248 ~yv~Q~~~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lg 326 (1383)
+|++|++.+++.+||+||+.++.. ..+.. . .+ ....+..+++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------K----------QE--------------ARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC----------H----------HH--------------HHHHHHHHHHHcC
Confidence 999999999999999999987431 11100 0 00 0112456788999
Q ss_pred Ccccc-cccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcc
Q 000628 327 LDICA-DTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAP 405 (1383)
Q Consensus 327 L~~~~-dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~ 405 (1383)
|.+.. +..+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|+ ..
T Consensus 141 l~~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~g~tiiivsH~-~~ 213 (257)
T PRK10619 141 IDERAQGKYPVH-----LSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-EGKTMVVVTHE-MG 213 (257)
T ss_pred CChhhhhCCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCC-HH
Confidence 97653 555554 999999999999999999999999999999999999999999999875 36777777665 45
Q ss_pred hHHhhcCeEEEEcCCeEEEecChhHHH
Q 000628 406 ETYDLFDDIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 406 ~~~~~~D~i~lL~~G~iv~~G~~~~~~ 432 (1383)
++.++||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 778899999999999999999988764
No 384
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=323.60 Aligned_cols=215 Identities=20% Similarity=0.273 Sum_probs=172.9
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1383)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478888887552 2469999999999999999999999999999999999532 1 13479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+... ...++.++|++|++.+++. |++||+.+...... .......++.+.++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87532 2345679999999988875 99999987643221 1112233455778888888852 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|.
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999975 5677899999998
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 899998874
No 385
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=318.66 Aligned_cols=200 Identities=24% Similarity=0.375 Sum_probs=167.1
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCCCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~lT 261 (1383)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5899999999999999999999999999999999999887 999999999875432 2467999999988886 69
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccCccc
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMVGDEMR 340 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 340 (1383)
|+||+.+.....+ . . ...++.+++.+||+ +..++.+.+
T Consensus 93 v~e~l~~~~~~~~--~---------------------~---------------~~~~~~~l~~~~l~~~~~~~~~~~--- 131 (241)
T PRK14250 93 VKDNIEYGPMLKG--E---------------------K---------------NVDVEYYLSIVGLNKEYATRDVKN--- 131 (241)
T ss_pred HHHHHhcchhhcC--c---------------------H---------------HHHHHHHHHHcCCCHHHhhCCccc---
Confidence 9999977422110 0 0 01235578889996 456666655
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+ ..++.+++|+|++|++|
T Consensus 132 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~-~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 132 --LSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHN-MEQAKRIGDYTAFLNKG 208 (241)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecc-HHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999876446777776655 45788899999999999
Q ss_pred eEEEecChhHHH
Q 000628 421 QIVYQGPRDNVL 432 (1383)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1383)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 386
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-33 Score=316.57 Aligned_cols=204 Identities=27% Similarity=0.418 Sum_probs=173.1
Q ss_pred eeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCHHH
Q 000628 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTVRE 264 (1383)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~E 264 (1383)
+|+|+|++|+||++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999987 8999999998765332 457999999999999999999
Q ss_pred HHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCC
Q 000628 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1383)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 344 (1383)
|+.++....+.. ..+ ....++..++.+||.+..++.+.+ ||
T Consensus 91 ~l~~~~~~~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS 131 (235)
T cd03299 91 NIAYGLKKRKVD--------------------KKE--------------IERKVLEIAEMLGIDHLLNRKPET-----LS 131 (235)
T ss_pred HHHHHHHHcCCC--------------------HHH--------------HHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 998753221100 000 011245578889998888888866 99
Q ss_pred hHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEE
Q 000628 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1383)
Q Consensus 345 GGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~ 424 (1383)
|||||||+||+|++.+|++++|||||+|||+.++.++.+.|++++...+.|++++.|++ +++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~-~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDF-EEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998765577877777665 57888999999999999999
Q ss_pred ecChhHHH
Q 000628 425 QGPRDNVL 432 (1383)
Q Consensus 425 ~G~~~~~~ 432 (1383)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 387
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.1e-34 Score=366.19 Aligned_cols=210 Identities=24% Similarity=0.406 Sum_probs=175.0
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++|+|+++... +++++|+|+|++|+|||++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3689999986432 1246999999999999999999999999999999999976 3 37999999987
Q ss_pred CC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000628 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1383)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1383)
+. ...+++.++||+|++.++.. |++||+.++. .+.++ +.++++++..++.+. .|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 64 45678899999999998764 9999998852 12333 336667777766542 35666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
| .+||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +++|+|++||+++ ....+|++++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 3 4699999999999999999999999999999999999999999999885 5899999999974 5678999999975
Q ss_pred CcEEEEecCC
Q 000628 1083 GGRVIYAGPL 1092 (1383)
Q Consensus 1083 gG~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 899999984
No 388
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=9.9e-33 Score=357.53 Aligned_cols=211 Identities=23% Similarity=0.372 Sum_probs=175.5
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++++|++|.++. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEE
Confidence 36899999987641 2359999999999999999999999999999999999766 347999999987
Q ss_pred CC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000628 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1383)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1383)
+. ...+++.+|||+|++.+++. |++||+.++.. .+.+. +.++++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~----~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK----ENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC----CCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 53 45678899999999998765 99999987521 12222 235677777776543 35566653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999985 5899999999975 5688999999985
Q ss_pred CcEEEEecCC
Q 000628 1083 GGRVIYAGPL 1092 (1383)
Q Consensus 1083 gG~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 899999984
No 389
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=320.35 Aligned_cols=215 Identities=25% Similarity=0.290 Sum_probs=173.8
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 467888876542 246999999999999999999999999999999999964311 1379999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+... ...++.++|++|++.+++. ||+||+.+....+.. ......++.+.++++.+++.+ ..+..
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87532 2345679999999988875 999999987543321 122334456788889888743 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 689999999975 4667899999998
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14261 223 L-GKLIEFDKT 232 (253)
T ss_pred C-CEEEEcCCH
Confidence 5 899988875
No 390
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-34 Score=325.24 Aligned_cols=219 Identities=23% Similarity=0.393 Sum_probs=173.3
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 477888876552 12469999999999999999999999999999999999765 3479999999876
Q ss_pred ChhcccceEEEEccCCCCC--CCCCHHHHHHHHHHhhcC-CCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000628 934 NQETFARVSGYCEQNDIHS--PYVTVYESLLYSAWLRLS-SDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTE 1010 (1383)
Q Consensus 934 ~~~~~~~~~gyv~Q~~~~~--~~lTv~E~l~f~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgG 1010 (1383)
.....++.++|++|++.+. ...+++|++.+....... ........++.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4332234699999997653 234788888653210000 01111223445788999999988777764 479999
Q ss_pred HHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1011 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1011 qrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999975 567789998666 4 8999988
Q ss_pred CCCc
Q 000628 1091 PLGH 1094 (1383)
Q Consensus 1091 ~~~~ 1094 (1383)
+..+
T Consensus 224 ~~~~ 227 (272)
T PRK15056 224 PTET 227 (272)
T ss_pred CHHh
Confidence 8643
No 391
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=325.22 Aligned_cols=215 Identities=22% Similarity=0.320 Sum_probs=173.2
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1383)
.+.++|+++.++ ...+|+|+|++|++||+++|+||||||||||+++|+|... + .+..|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578888887552 2359999999999999999999999999999999999632 1 02479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 1001 (1383)
.+... ...++.++|++|++.+++. ||.||+.+....+.. ......++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 86532 1345679999999988875 999999986533211 11223345678888888874 223333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..|||||||||+|||+|+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999976 5667899999998
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 392
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=319.81 Aligned_cols=215 Identities=25% Similarity=0.333 Sum_probs=172.9
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~g 930 (1383)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 367888877552 24699999999999999999999999999999999997531 1 2579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 234567999999998876 799999987643321 1112233456788999999842 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 458999999999999999999999999999999999999999999999864 799999999975 5677899999997
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 889888874
No 393
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=321.80 Aligned_cols=206 Identities=20% Similarity=0.312 Sum_probs=165.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CceeEEEECCeeCCCC-----CCcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 256 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 358999999999999999999999999999999999987510 1389999999987532 124579999999888
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc----cccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1383)
++ +||+||+.|..+..+.. .. + ....++.+++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGAN----------KK----------D--------------LDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCCcchhhhhc
Confidence 87 89999998864322110 00 0 011245577788873 3456
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|+ ..++.+++|
T Consensus 150 ~~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~~tiiivsH~-~~~~~~~~d 221 (258)
T PRK14268 150 SPALS-----LSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--DYTIVIVTHN-MQQAARISD 221 (258)
T ss_pred CChhh-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--CCEEEEEECC-HHHHHHhCC
Confidence 66655 999999999999999999999999999999999999999999999864 5677766655 457788999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000628 413 DIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 413 ~i~lL~~G~iv~~G~~~~~~ 432 (1383)
+|++|++|++++.|+++++.
T Consensus 222 ~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 394
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=325.40 Aligned_cols=204 Identities=22% Similarity=0.337 Sum_probs=167.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-------CcceEEEecCCC--
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHD-- 254 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~~-- 254 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999987 999999999875421 235699999996
Q ss_pred CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccc
Q 000628 255 LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1383)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 333 (1383)
.++ ..||+||+.|.....+.. .. + ....++.+++.+||. ...++
T Consensus 97 ~~~-~~tv~e~l~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~ 141 (280)
T PRK13649 97 QLF-EETVLKDVAFGPQNFGVS----------QE----------E--------------AEALAREKLALVGISESLFEK 141 (280)
T ss_pred hhc-cccHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCChhhhhC
Confidence 344 479999998753321110 00 0 011245678889997 35677
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+++ |||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+
T Consensus 142 ~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiiivsH~~-~~~~~~~d~ 214 (280)
T PRK13649 142 NPFE-----LSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-SGMTIVLVTHLM-DDVANYADF 214 (280)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeccH-HHHHHhCCE
Confidence 7665 999999999999999999999999999999999999999999999875 367777776654 477889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
+++|++|++++.|+.+++.
T Consensus 215 i~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 215 VYVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988764
No 395
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-34 Score=312.97 Aligned_cols=195 Identities=23% Similarity=0.346 Sum_probs=163.3
Q ss_pred eeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCHHHHHH
Q 000628 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTVRETLD 267 (1383)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~E~l~ 267 (1383)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999887 9999999998765432 357999999999999999999998
Q ss_pred HhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHH
Q 000628 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1383)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1383)
+........ .. +....++.+++.+||++..++.+.+ |||||
T Consensus 93 ~~~~~~~~~--------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 133 (211)
T cd03298 93 LGLSPGLKL--------------------TA--------------EDRQAIEVALARVGLAGLEKRLPGE-----LSGGE 133 (211)
T ss_pred cccccccCc--------------------cH--------------HHHHHHHHHHHHcCCHHHHhCCccc-----CCHHH
Confidence 753211000 00 0011356688899998888887765 99999
Q ss_pred HHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEEec
Q 000628 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQG 426 (1383)
Q Consensus 348 kqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G 426 (1383)
||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|+ ..++.+++|++++|++|+++..|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~-~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQ-PEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999999999999876556777776554 45788899999999999998764
No 396
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=319.39 Aligned_cols=219 Identities=21% Similarity=0.277 Sum_probs=172.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g---~~~G~i~i~g 930 (1383)
.++++|+++.+. ++.+|+|+|++|++|++++|+||||||||||+++|+|...+. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 366777776542 245999999999999999999999999999999999975421 2369999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVS 1005 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~ 1005 (1383)
.+... ...++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+....... ..+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 87532 2346789999999988875 999999886543211 1122234557778888887532111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcE
Q 000628 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGR 1085 (1383)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~ 1085 (1383)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.+|++++|.+ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999985 5899999999976 56778899999975 78
Q ss_pred EEEecCC
Q 000628 1086 VIYAGPL 1092 (1383)
Q Consensus 1086 ~~~~g~~ 1092 (1383)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9988875
No 397
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=327.01 Aligned_cols=211 Identities=20% Similarity=0.308 Sum_probs=167.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCC-----CCcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 256 (1383)
.++|+|+|++|++|++++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|++++
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999998631 12389999999998632 235679999999998
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccccccccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1383)
++ .||+||+.|+....+.. .. +. ....++..++.++|.+..++.++
T Consensus 175 ~~-~ti~eNi~~~~~~~~~~----------~~----------~~-------------~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 FE-MSIFDNVAYGPRNNGIN----------DR----------KI-------------LEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred CC-CcHHHHHHhHHHhcCCC----------hH----------HH-------------HHHHHHHHHHHcCCcchhhhhhh
Confidence 85 79999999863321100 00 00 00123456677777655455554
Q ss_pred CcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEE
Q 000628 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1383)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~l 416 (1383)
+ .+..|||||||||+||||++.+|+|++|||||+|||+.+...+.++|+++.+ +.|+|++.|++ ..+.+.+|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~~Tii~iTH~l-~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--KYSIIIVTHSM-AQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhCCEEEE
Confidence 3 4556999999999999999999999999999999999999999999998865 56777666554 467788999999
Q ss_pred EcCCeEEEecChhHHH
Q 000628 417 LSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 417 L~~G~iv~~G~~~~~~ 432 (1383)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999885
No 398
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=324.31 Aligned_cols=214 Identities=24% Similarity=0.316 Sum_probs=172.5
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1383)
.++++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 578888887552 24699999999999999999999999999999999997531 12479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+... ...++.++|++|++.+++. ||.||+.+....+. ... ..++.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87531 2346789999999888875 99999987654321 112 23456889999998853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++||++|+.+|+||||||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++...+|+++++.
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 457999999999999999999999999999999999999999999999976 489999999975 4667799976543
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
++|++++.|+.
T Consensus 254 ~~G~i~~~g~~ 264 (285)
T PRK14254 254 TGGELVEFDDT 264 (285)
T ss_pred eCCEEEEeCCH
Confidence 35899988874
No 399
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=6.1e-34 Score=311.82 Aligned_cols=184 Identities=28% Similarity=0.336 Sum_probs=158.4
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
+.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (201)
T cd03231 13 RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLSV 90 (201)
T ss_pred ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccccHHhhhheEEeccccccCCCcCH
Confidence 4699999999999999999999999999999999997653 47999999987532 3355679999999988889999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
+||+.+.... . .++.++++++.+++.+..++. +..||||||||++|||+|+.+|++|+|||||+||
T Consensus 91 ~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~L 156 (201)
T cd03231 91 LENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQRRVALARLLLSGRPLWILDEPTTAL 156 (201)
T ss_pred HHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 9999875311 1 234578999999998776665 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEE
Q 000628 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1080 (1383)
|+.++..+++.|+++.++|+|+|++||++. +....+++++.+
T Consensus 157 D~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 157 DKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999998877999999999975 677788888766
No 400
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.3e-33 Score=315.65 Aligned_cols=197 Identities=24% Similarity=0.348 Sum_probs=165.1
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-------cceEEEecCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-------QRTCAYISQHDLHH 257 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~~~ 257 (1383)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5899999999999999999999999999999999999887 9999999998765432 24699999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+||.||+.+.....+.. ..+ ....++.+++.+||.+..++.+++
T Consensus 101 ~~~tv~~~l~~~~~~~~~~--------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 146 (228)
T PRK10584 101 PTLNALENVELPALLRGES--------------------SRQ--------------SRNGAKALLEQLGLGKRLDHLPAQ 146 (228)
T ss_pred CCcCHHHHHHHHHHhcCCC--------------------HHH--------------HHHHHHHHHHHcCCHhHhhCChhh
Confidence 9999999998753221100 000 012356678899998878888776
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ +.+|++++|
T Consensus 147 -----LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l 219 (228)
T PRK10584 147 -----LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRL 219 (228)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEE
Confidence 99999999999999999999999999999999999999999999987655678888777664 55 569999999
Q ss_pred cCCeEEEe
Q 000628 418 SEGQIVYQ 425 (1383)
Q Consensus 418 ~~G~iv~~ 425 (1383)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99998753
No 401
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=319.90 Aligned_cols=206 Identities=20% Similarity=0.262 Sum_probs=168.4
Q ss_pred cceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEcCccCCh-----hcccceEEEEccCCC
Q 000628 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKISGYPKNQ-----ETFARVSGYCEQNDI 950 (1383)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 950 (1383)
++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ + +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 20 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 99 (261)
T PRK14263 20 NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPN 99 (261)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCc
Confidence 45699999999999999999999999999999999997542 1 247999999987532 234567999999988
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000628 951 HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1383)
Q Consensus 951 ~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1383)
++ .+|+.||+.+....+. . ..+..+.++++++.++|.+..+.... ..++.||||||||++|||||+.+|++|+|
T Consensus 100 ~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~G~~qrv~laral~~~p~llll 173 (261)
T PRK14263 100 PF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSGLSLSGGQQQRLCIARAIATEPEVLLL 173 (261)
T ss_pred cc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 77 5999999988754331 1 12234568899999998543222211 12467999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe-------cCcEEEEecCC
Q 000628 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK-------RGGRVIYAGPL 1092 (1383)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~-------~gG~~~~~g~~ 1092 (1383)
||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|. ++|++++.|+.
T Consensus 174 DEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 174 DEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999986 4799999999976 5678899999996 46899999875
No 402
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-34 Score=320.32 Aligned_cols=204 Identities=25% Similarity=0.329 Sum_probs=168.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCC------C---CCcceEEEecCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE------F---VPQRTCAYISQHD 254 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~------~---~~~~~~~yv~Q~~ 254 (1383)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++
T Consensus 15 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~ 91 (242)
T PRK11124 15 HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQY 91 (242)
T ss_pred eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCc
Confidence 35999999999999999999999999999999999999887 9999999997631 0 1235799999999
Q ss_pred CCCCCCCHHHHHHHhh-hccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccc
Q 000628 255 LHHGEMTVRETLDFSG-RCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADT 333 (1383)
Q Consensus 255 ~~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 333 (1383)
.+++.+||.||+.+.. ...+.. . .+ ....++..++.+||++..++
T Consensus 92 ~~~~~~tv~e~i~~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~gl~~~~~~ 137 (242)
T PRK11124 92 NLWPHLTVQQNLIEAPCRVLGLS----------K----------DQ--------------ALARAEKLLERLRLKPYADR 137 (242)
T ss_pred cccCCCcHHHHHHHHHHHHcCCC----------H----------HH--------------HHHHHHHHHHHcCChhhhhC
Confidence 9999999999997531 111100 0 00 01134667889999887788
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+++ |||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+.|++++.|++ .++.+++|+
T Consensus 138 ~~~~-----LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~sh~~-~~~~~~~d~ 210 (242)
T PRK11124 138 FPLH-----LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TGITQVIVTHEV-EVARKTASR 210 (242)
T ss_pred Chhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhcCE
Confidence 7765 999999999999999999999999999999999999999999999865 367777766654 477789999
Q ss_pred EEEEcCCeEEEecChhHH
Q 000628 414 IILLSEGQIVYQGPRDNV 431 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~ 431 (1383)
+++|.+|++++.|+.+++
T Consensus 211 i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 211 VVYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEEECCEEEEeCCHHHh
Confidence 999999999999998764
No 403
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=318.82 Aligned_cols=209 Identities=24% Similarity=0.329 Sum_probs=168.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCCC---CcceEEEecCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEFV---PQRTCAYISQHDLHHG 258 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~ 258 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35899999999999999999999999999999999998741 123899999999875432 2467999999998899
Q ss_pred CCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc----ccccc
Q 000628 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADTM 334 (1383)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt~ 334 (1383)
.+||+||+.++.+..+... +..+ ....++..++.+||.+ ..++.
T Consensus 96 ~~tv~enl~~~~~~~~~~~------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~~ 143 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVK------------------SKKE--------------LQERVRWALEKAQLWDEVKDRLDAP 143 (250)
T ss_pred CCcHHHHHHHHHHhccccC------------------CHHH--------------HHHHHHHHHHHcCCCcchhhhhcCC
Confidence 9999999988643211000 0000 0112456788888853 35566
Q ss_pred ccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
+.+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|+|
T Consensus 144 ~~~-----LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d~i 215 (250)
T PRK14247 144 AGK-----LSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK--DMTIVLVTHFP-QQAARISDYV 215 (250)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhcCEE
Confidence 655 999999999999999999999999999999999999999999999854 56766666554 4778899999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000628 415 ILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1383)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 216 AFLYKGQIVEWGPTREVF 233 (250)
T ss_pred EEEECCeEEEECCHHHHH
Confidence 999999999999998764
No 404
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.1e-33 Score=352.30 Aligned_cols=220 Identities=21% Similarity=0.323 Sum_probs=178.9
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.+ +++.+|+|||+++++||++||+||||||||||+++|+|...+++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~-------------~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTF-------------GGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEe-------------CCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 4566776544 234699999999999999999999999999999999997653224799999998764
Q ss_pred hh----cccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCC-CCcHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCC
Q 000628 935 QE----TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSS-DVDTKKRKMFVDEVMELVELKSLN-DSMVGLPGVSGLS 1008 (1383)
Q Consensus 935 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~~g~~~~~~LS 1008 (1383)
.. ..++.+||++|++.+++.+||.||+.+....+... ....++..++++++++.++|.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 21 12456999999999999999999998764322111 112333456688999999997654 343 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
|||||||+||++|+.+|++|||||||+|||+.+...+.+.|++++++|+|||++||+++ ++.+.||++++|.+ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999975 56678999999985 78998
Q ss_pred ecCCCc
Q 000628 1089 AGPLGH 1094 (1383)
Q Consensus 1089 ~g~~~~ 1094 (1383)
.|+..+
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 888654
No 405
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.9e-34 Score=313.68 Aligned_cols=194 Identities=29% Similarity=0.431 Sum_probs=160.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCC-CCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~ 259 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999999887 999999999876432 2357999999974 4667
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
+||+||+.+.....+.. . .+ ....++.+++.+||++..++.+++
T Consensus 91 ~t~~~~l~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 134 (211)
T cd03225 91 PTVEEEVAFGLENLGLP----------E----------EE--------------IEERVEEALELVGLEGLRDRSPFT-- 134 (211)
T ss_pred CcHHHHHHHHHHHcCCC----------H----------HH--------------HHHHHHHHHHHcCcHhhhcCCccc--
Confidence 89999998753321100 0 00 011245678889998777877766
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|+ ..++..+||+|++|++
T Consensus 135 ---LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~tvi~~sH~-~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 135 ---LSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE-GKTIIIVTHD-LDLLLELADRVIVLED 209 (211)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc-CCEEEEEeCC-HHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999998764 6777776665 4578888999999999
Q ss_pred Ce
Q 000628 420 GQ 421 (1383)
Q Consensus 420 G~ 421 (1383)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 406
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-34 Score=323.56 Aligned_cols=210 Identities=22% Similarity=0.339 Sum_probs=172.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 36999999999999999999999999999999999999887 8999999998754322 35799999998888899
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||.||+.+...... +. . +. .... ....++.+++.+||++..++.+++
T Consensus 101 tv~e~l~~~~~~~~-~~-~-------------~~-~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 147 (265)
T PRK10575 101 TVRELVAIGRYPWH-GA-L-------------GR-FGAA--------------DREKVEEAISLVGLKPLAHRLVDS--- 147 (265)
T ss_pred cHHHHHHhCccccc-cc-c-------------cC-CCHH--------------HHHHHHHHHHHcCCHHHhcCCccc---
Confidence 99999987532100 00 0 00 0000 011246688899998878888876
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+ ..++.+++|+|++|++|
T Consensus 148 --LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~-~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 148 --LSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHD-INMAARYCDYLVALRGG 224 (265)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999876446777777665 45788999999999999
Q ss_pred eEEEecChhHHH
Q 000628 421 QIVYQGPRDNVL 432 (1383)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1383)
+++..|+.+++.
T Consensus 225 ~i~~~~~~~~~~ 236 (265)
T PRK10575 225 EMIAQGTPAELM 236 (265)
T ss_pred eEEEecCHHHhc
Confidence 999999987763
No 407
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=6.4e-34 Score=309.01 Aligned_cols=178 Identities=25% Similarity=0.322 Sum_probs=150.1
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-----hcccceEEEEccCCC-CCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDI-HSP 953 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~~ 953 (1383)
+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 469999999999999999999999999999999999765 347999999987531 134567999999973 233
Q ss_pred CCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCC
Q 000628 954 YVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1033 (1383)
Q Consensus 954 ~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEP 1033 (1383)
..||+||+.+..... ....++..+.++++++.++|.+..++. +..||||||||++|||+|+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERP-----THCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 579999998865322 123334455688999999998877776 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCc
Q 000628 1034 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1067 (1383)
Q Consensus 1034 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 1067 (1383)
|+|||+.++..+.+.|++++++|+|||++||+++
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999864
No 408
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-33 Score=321.08 Aligned_cols=205 Identities=20% Similarity=0.278 Sum_probs=170.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCC-CCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDL-HHGE 259 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~ 259 (1383)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999987 999999999875432 2467999999974 5777
Q ss_pred CCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcc
Q 000628 260 MTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEM 339 (1383)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 339 (1383)
.||.||+.++....+.. +. + ....++.+++.+||.+..++.+.+
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP----------RE----------E--------------MIKRVDEALLAVNMLDFKTREPAR-- 140 (277)
T ss_pred CCHHHHHHhhHHHcCCC----------HH----------H--------------HHHHHHHHHHHCCCHhHhhCCccc--
Confidence 89999998753321110 00 0 011356678889998877877765
Q ss_pred cCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcC
Q 000628 340 RRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSE 419 (1383)
Q Consensus 340 ~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~ 419 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+.. ++. .+|+|++|++
T Consensus 141 ---LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~~-~~d~i~~l~~ 215 (277)
T PRK13642 141 ---LSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EAA-SSDRILVMKA 215 (277)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHH-hCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999987655778777766654 454 6999999999
Q ss_pred CeEEEecChhHHH
Q 000628 420 GQIVYQGPRDNVL 432 (1383)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1383)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998875
No 409
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.7e-33 Score=321.81 Aligned_cols=207 Identities=22% Similarity=0.241 Sum_probs=169.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCC--CCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDL--HHG 258 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~--~~~ 258 (1383)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999987 9999999998753221 246999999974 567
Q ss_pred CCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccccccC
Q 000628 259 EMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMVGD 337 (1383)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 337 (1383)
.+||.|++.+..+...... . .+ ....++.+++.+||. +..++.+.+
T Consensus 103 ~~tv~~~l~~~~~~~~~~~---------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~~ 149 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE---------P----------EQ--------------REKQIIETLRQVGLLPDHASYYPHM 149 (267)
T ss_pred chhHHHHHHHHHHhccCCC---------H----------HH--------------HHHHHHHHHHHcCCChHHHhcCchh
Confidence 8899999987543211000 0 00 011346688899994 566776665
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.++||++++|
T Consensus 150 -----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~-~~~~~~~d~i~~l 223 (267)
T PRK15112 150 -----LAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHL-GMMKHISDQVLVM 223 (267)
T ss_pred -----cCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCH-HHHHHhcCEEEEE
Confidence 9999999999999999999999999999999999999999999998765567777766654 5788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000628 418 SEGQIVYQGPRDNVL 432 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1383)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 410
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.6e-33 Score=321.98 Aligned_cols=224 Identities=25% Similarity=0.350 Sum_probs=177.2
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
+.++|+++.++... ..+ +..++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 56778776553100 000 0113569999999999999999999999999999999999755 35899999998653
Q ss_pred h------hcccceEEEEccCC--CCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000628 935 Q------ETFARVSGYCEQND--IHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1383)
Q Consensus 935 ~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1383)
. ...++.++|++|++ .+.+..|+.|++.+..... ......+....++++++.+++. ...+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 2 12456799999997 3567899999987643211 1222344455689999999996 455554 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCc
Q 000628 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1383)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1084 (1383)
.||||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|++++|.+ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999975 56678999999974 8
Q ss_pred EEEEecCCC
Q 000628 1085 RVIYAGPLG 1093 (1383)
Q Consensus 1085 ~~~~~g~~~ 1093 (1383)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 999998864
No 411
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=8.9e-34 Score=352.96 Aligned_cols=212 Identities=21% Similarity=0.323 Sum_probs=179.4
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+||||++++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 377888887552 3469999999999999999999999999999999999765 3479999999875
Q ss_pred Ch---hc-ccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 934 NQ---ET-FARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 934 ~~---~~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
.. .. .++.+||++|++.+++.+||+||+.+.... ....++.++++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 32 11 224699999999999999999999875311 1233456889999999987777764 47999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999975 46678999999985 889999
Q ss_pred cCCCc
Q 000628 1090 GPLGH 1094 (1383)
Q Consensus 1090 g~~~~ 1094 (1383)
|+..+
T Consensus 222 g~~~~ 226 (510)
T PRK15439 222 GKTAD 226 (510)
T ss_pred cChHH
Confidence 88654
No 412
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=323.06 Aligned_cols=210 Identities=21% Similarity=0.341 Sum_probs=172.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 46999999999999999999999999999999999999887 8999999998754322 35699999999999899
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||+||+.+...-.. +. . . ... + .....++.+++.+||++..++.+.+
T Consensus 97 tv~~~~~~~~~~~~-~~----~----------~-~~~-~-------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 143 (265)
T PRK10253 97 TVQELVARGRYPHQ-PL----F----------T-RWR-K-------------EDEEAVTKAMQATGITHLADQSVDT--- 143 (265)
T ss_pred cHHHHHHhCccccc-cc----c----------c-CCC-H-------------HHHHHHHHHHHHcCCHHHhcCCccc---
Confidence 99999987521000 00 0 0 000 0 0011346688899998877877766
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|
T Consensus 144 --LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~-~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 144 --LSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDL-NQACRYASHLIALREG 220 (265)
T ss_pred --CChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998764466777776654 4788999999999999
Q ss_pred eEEEecChhHHH
Q 000628 421 QIVYQGPRDNVL 432 (1383)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1383)
++++.|+++++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 413
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=6.1e-34 Score=315.00 Aligned_cols=200 Identities=29% Similarity=0.431 Sum_probs=161.1
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCC--CCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHH--GEMT 261 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~--~~lT 261 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. ..+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999887 9999999987642 346799999998663 3489
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.+....... .+. . .... ....++.+++.+||++..++.+++
T Consensus 87 v~e~l~~~~~~~~~--~~~-------------~-~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~---- 132 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFR-------------R-LSKA--------------DKAKVDEALERVGLSELADRQIGE---- 132 (213)
T ss_pred HHHHHHhccccccc--ccc-------------C-CCHH--------------HHHHHHHHHHHcCCHHHHhCCccc----
Confidence 99999875321100 000 0 0000 012356688899998877888776
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|++|
T Consensus 133 -LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~sH~~-~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 133 -LSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-EGMTILVVTHDL-GLVLEYFDRVLLLNRT- 208 (213)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCCH-HHHHHhcCEEEEEcCc-
Confidence 999999999999999999999999999999999999999999999876 467777776654 5788899999999886
Q ss_pred EEEec
Q 000628 422 IVYQG 426 (1383)
Q Consensus 422 iv~~G 426 (1383)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66554
No 414
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=319.38 Aligned_cols=209 Identities=21% Similarity=0.345 Sum_probs=166.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCceeEEEECCeeCCC--C---CCcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNE--F---VPQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~~~~ 256 (1383)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++.. . ..++.++|++|++.+
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (253)
T PRK14267 17 NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNP 96 (253)
T ss_pred eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCcc
Confidence 35999999999999999999999999999999999998762 1238999999998752 1 124579999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc----ccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 332 (1383)
++.+||.||+.++....+... +..+. ...++.+++.+||.. ..+
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~------------------~~~~~--------------~~~~~~~l~~~~l~~~~~~~~~ 144 (253)
T PRK14267 97 FPHLTIYDNVAIGVKLNGLVK------------------SKKEL--------------DERVEWALKKAALWDEVKDRLN 144 (253)
T ss_pred CCCCcHHHHHHHHHHhcCccC------------------CHHHH--------------HHHHHHHHHHcCCccchhhhhc
Confidence 999999999987643221100 00000 012455677777742 345
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 145 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d 216 (253)
T PRK14267 145 DYPSN-----LSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--EYTIVLVTHSP-AQAARVSD 216 (253)
T ss_pred cChhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--CCEEEEEECCH-HHHHhhCC
Confidence 55544 999999999999999999999999999999999999999999999864 46777766654 47788999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000628 413 DIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 413 ~i~lL~~G~iv~~G~~~~~~ 432 (1383)
+|++|++|++++.|+.+++.
T Consensus 217 ~i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 217 YVAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 415
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-34 Score=288.81 Aligned_cols=207 Identities=22% Similarity=0.326 Sum_probs=175.0
Q ss_pred ccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC-------------h---hccc
Q 000628 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN-------------Q---ETFA 939 (1383)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~-------------~---~~~~ 939 (1383)
.++...+|++||++.+.|+++.|+|.|||||||+|++|.-..+ +..|.|.+||..+. . ..+|
T Consensus 15 ~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~R 92 (256)
T COG4598 15 RYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLR 92 (256)
T ss_pred hcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHH
Confidence 4566789999999999999999999999999999999987655 35799999986421 1 1234
Q ss_pred ceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHH
Q 000628 940 RVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAV 1019 (1383)
Q Consensus 940 ~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~ 1019 (1383)
...|+|+|+..++..+||.||+.-.-.-- ...++.+..++.+..|..+|+.+.++... ..|||||+||++|||
T Consensus 93 s~L~mVFQ~FNLWsHmtvLeNViEaPvhV--Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQQR~aIAR 165 (256)
T COG4598 93 TRLGMVFQHFNLWSHMTVLENVIEAPVHV--LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQQRVAIAR 165 (256)
T ss_pred HHhhHhhhhcchhHHHHHHHHHHhcchHh--hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHHHHHHHHH
Confidence 56899999999999999999997543211 13456677778899999999999888774 479999999999999
Q ss_pred HHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1020 ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1020 aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
||+.+|+++++|||||.|||+-.-++.+.+++++++|+|++++||.+.. .-+...+++.|.+ |.+.+.||+.
T Consensus 166 aLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P~ 237 (256)
T COG4598 166 ALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPPE 237 (256)
T ss_pred HHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCChH
Confidence 9999999999999999999999999999999999999999999998642 3345678888875 8999999974
No 416
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=321.88 Aligned_cols=216 Identities=24% Similarity=0.300 Sum_probs=172.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC--------CcceEEEecCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV--------PQRTCAYISQHDL 255 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--------~~~~~~yv~Q~~~ 255 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 45999999999999999999999999999999999999875223699999998875321 1356999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1383)
+++.+||+||+.+....... . .... .+. ..+ +....++.+++.+||++..|+.+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~-----~----~~~~--~~~-~~~--------------~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGSTP-----F----WRTC--FSW-FTR--------------EQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhccccc-----c----hhhh--ccc-ccH--------------HHHHHHHHHHHHcCCHHHHhCCc
Confidence 99999999999875321000 0 0000 000 000 01123567889999988888887
Q ss_pred cCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEE
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDII 415 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~ 415 (1383)
++ |||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++..+.|+|++.|++ .++.+++|+|+
T Consensus 151 ~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~-~~~~~~~d~i~ 224 (262)
T PRK09984 151 ST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQV-DYALRYCERIV 224 (262)
T ss_pred cc-----cCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEE
Confidence 76 9999999999999999999999999999999999999999999999765567777776654 46889999999
Q ss_pred EEcCCeEEEecChhHH
Q 000628 416 LLSEGQIVYQGPRDNV 431 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~ 431 (1383)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 417
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.2e-33 Score=315.51 Aligned_cols=206 Identities=27% Similarity=0.414 Sum_probs=173.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTV 262 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 262 (1383)
+++|+|+|+++.+|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 36999999999999999999999999999999999999887 8999999998765333 3679999999999999999
Q ss_pred HHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCC
Q 000628 263 RETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRG 342 (1383)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 342 (1383)
+||+.+.....+.. .. . ....++.+++.++|....++.+++
T Consensus 90 ~enl~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHP----------KA----------K--------------IKARVEELLELVQLEGLGDRYPNQ----- 130 (237)
T ss_pred HHHHHhHHHhcCCC----------HH----------H--------------HHHHHHHHHHHcCCHhHhhCChhh-----
Confidence 99998764322110 00 0 001245678889998777777766
Q ss_pred CChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeE
Q 000628 343 ISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQI 422 (1383)
Q Consensus 343 LSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~i 422 (1383)
||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~-~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQ-EEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHhhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998764467888877765 477899999999999999
Q ss_pred EEecChhHHH
Q 000628 423 VYQGPRDNVL 432 (1383)
Q Consensus 423 v~~G~~~~~~ 432 (1383)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988774
No 418
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2e-33 Score=356.87 Aligned_cols=207 Identities=24% Similarity=0.363 Sum_probs=170.3
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 261 (1383)
++|+|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+|+ .|
T Consensus 349 ~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~T 424 (588)
T PRK13657 349 QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFN-RS 424 (588)
T ss_pred ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCccccc-cc
Confidence 5899999999999999999999999999999999999997 9999999999887653 468999999999886 59
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
++|||.++.. +.+.++..+++...+ .+..++ .|++..||.+|+. ++
T Consensus 425 i~~Ni~~~~~-------------------------~~~d~~i~~al~~~~------l~~~i~--~lp~gldt~i~~~-g~ 470 (588)
T PRK13657 425 IEDNIRVGRP-------------------------DATDEEMRAAAERAQ------AHDFIE--RKPDGYDTVVGER-GR 470 (588)
T ss_pred HHHHHhcCCC-------------------------CCCHHHHHHHHHHhC------HHHHHH--hCcccccchhcCC-CC
Confidence 9999987521 001111111211111 111122 3677889999873 56
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
.||||||||++||||++++|+|++||||||+||+.++..+.+.|++..+ ++|+|++.|++ +..+.+|+|++|++|+
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~--~~tvIiitHr~--~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMK--GRTTFIIAHRL--STVRNADRILVFDNGR 546 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhc--CCEEEEEEecH--HHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999988753 68888888876 5678899999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
++..|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (588)
T PRK13657 547 VVESGSFDELVA 558 (588)
T ss_pred EEEeCCHHHHHH
Confidence 999999999864
No 419
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=317.59 Aligned_cols=215 Identities=23% Similarity=0.319 Sum_probs=171.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g-~~~G~i~i~g 930 (1383)
.+.++|+++.++ .+.+|+|+|+++++||++||+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 467888876542 2469999999999999999999999999999999999642 11 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+... ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87531 234567999999998887 6999999886543221 112222345677888887642 22232
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 589999999976 5677899999997
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 889888874
No 420
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-33 Score=321.86 Aligned_cols=205 Identities=27% Similarity=0.357 Sum_probs=168.1
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-----CCcceEEEecCCCCC-C
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH-H 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~-~ 257 (1383)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.. +
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35899999999999999999999999999999999999987 99999999987421 123579999999753 4
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
...|+.||+.+.....+... .+ ....++.+++.+||++..++.+++
T Consensus 91 ~~~~~~~~l~~~~~~~~~~~--------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 136 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVPE--------------------AE--------------ITRRVDEALTLVDAQHFRHQPIQC 136 (271)
T ss_pred ccccHHHHHHHHHHHcCCCH--------------------HH--------------HHHHHHHHHHHcCCHhHhcCCchh
Confidence 45689999987533211100 00 011245678889998888887776
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|+ ..++.+++|++++|
T Consensus 137 -----LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tii~vtH~-~~~~~~~~d~i~~l 209 (271)
T PRK13638 137 -----LSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QGNHVIISSHD-IDLIYEISDAVYVL 209 (271)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999875 36676666554 45788899999999
Q ss_pred cCCeEEEecChhHHH
Q 000628 418 SEGQIVYQGPRDNVL 432 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1383)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 421
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-33 Score=327.30 Aligned_cols=214 Identities=17% Similarity=0.201 Sum_probs=169.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC-CCceeEEEECCeeCCCCCC-------cceEEEecCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-LRASGKITYCGHELNEFVP-------QRTCAYISQHDL 255 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~~~ 255 (1383)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++. ...+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 46999999999999999999999999999999999998641 1238999999998865432 246999999975
Q ss_pred --CCCCCCHHHHHHHhhhccCC-CchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc---
Q 000628 256 --HHGEMTVRETLDFSGRCLGV-GTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI--- 329 (1383)
Q Consensus 256 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--- 329 (1383)
+.+.+||.+++.+....... +.. ..... +....+..+++.+||++
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~----------------~~~~~-------------~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRW----------------WQRFG-------------WRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhccccc----------------cccHH-------------HHHHHHHHHHHHCCCCChHH
Confidence 57889999999753211000 000 00000 00123567899999974
Q ss_pred cccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHh
Q 000628 330 CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYD 409 (1383)
Q Consensus 330 ~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~ 409 (1383)
..++.+.+ |||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+..+.|+|++. |....+.+
T Consensus 151 ~~~~~p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~it-Hdl~~v~~ 224 (330)
T PRK15093 151 AMRSFPYE-----LTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLIS-HDLQMLSQ 224 (330)
T ss_pred HHhCCchh-----CCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEE-CCHHHHHH
Confidence 34555555 9999999999999999999999999999999999999999999999875567766665 45568889
Q ss_pred hcCeEEEEcCCeEEEecChhHHH
Q 000628 410 LFDDIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 410 ~~D~i~lL~~G~iv~~G~~~~~~ 432 (1383)
++|+|++|++|+|++.|+.+++.
T Consensus 225 ~~dri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 225 WADKINVLYCGQTVETAPSKELV 247 (330)
T ss_pred hCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999998874
No 422
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.2e-33 Score=316.49 Aligned_cols=206 Identities=23% Similarity=0.283 Sum_probs=166.2
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC-CceeEEEECCeeCCCCCC-cceEEEecCCCC--CCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL-RASGKITYCGHELNEFVP-QRTCAYISQHDL--HHGEM 260 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~--~~~~l 260 (1383)
++|+|+|+++++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|+++..... ++.++||+|++. +.+..
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 48999999999999999999999999999999999998710 028999999998754322 357999999974 44667
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc---cccccccC
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI---CADTMVGD 337 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~vg~ 337 (1383)
|+.+++.+.++..+.. . ....++.+++.+||.+ ..++.+++
T Consensus 97 ~~~~~~~~~~~~~~~~---------------------~---------------~~~~~~~~l~~~~l~~~~~~~~~~~~~ 140 (254)
T PRK10418 97 TMHTHARETCLALGKP---------------------A---------------DDATLTAALEAVGLENAARVLKLYPFE 140 (254)
T ss_pred cHHHHHHHHHHHcCCC---------------------h---------------HHHHHHHHHHHcCCCChhhhhhcCCcc
Confidence 9999986643221100 0 0012456788899976 34666655
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+++|++++|
T Consensus 141 -----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~-~~~~~~~d~v~~l 214 (254)
T PRK10418 141 -----MSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDM-GVVARLADDVAVM 214 (254)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998765567777776654 4677899999999
Q ss_pred cCCeEEEecChhHHH
Q 000628 418 SEGQIVYQGPRDNVL 432 (1383)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1383)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999988764
No 423
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=287.23 Aligned_cols=204 Identities=24% Similarity=0.324 Sum_probs=176.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCCHH
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMTVR 263 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 263 (1383)
..+|+|||+.|.+|+.++++||||||||||||+++|+.+|. .|+|.+||.+++... ..-|.|+|++.++|.+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCCC--ccceeEeccCccchhhHHH
Confidence 45999999999999999999999999999999999999997 999999999887543 3458999999999999999
Q ss_pred HHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCC
Q 000628 264 ETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGI 343 (1383)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 343 (1383)
||++|+.+++|..+.. + ...+.+.+...||++..+..+-+ |
T Consensus 93 dNvafgL~l~Gi~k~~-------R---------------------------~~~a~q~l~~VgL~~~~~~~i~q-----L 133 (259)
T COG4525 93 DNVAFGLQLRGIEKAQ-------R---------------------------REIAHQMLALVGLEGAEHKYIWQ-----L 133 (259)
T ss_pred HHHHHHHHhcCCCHHH-------H---------------------------HHHHHHHHHHhCcccccccceEe-----e
Confidence 9999999988865321 1 12356688899999988888876 9
Q ss_pred ChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc--CCe
Q 000628 344 SGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS--EGQ 421 (1383)
Q Consensus 344 SGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~--~G~ 421 (1383)
||||||||.|||||..+|+.|+||||+.+||+-+++++...|-++.+..++.+.+. +|...|..-++++++||+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lli-TH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLI-THDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEE-eccHHHHHhhhheeEEecCCCce
Confidence 99999999999999999999999999999999999999999999888777665554 566778999999999998 489
Q ss_pred EEEecChhHHH
Q 000628 422 IVYQGPRDNVL 432 (1383)
Q Consensus 422 iv~~G~~~~~~ 432 (1383)
|+..-+.+-..
T Consensus 213 vv~~~~~df~r 223 (259)
T COG4525 213 VVERLPLDFAR 223 (259)
T ss_pred eeEecCCCHHH
Confidence 99877766433
No 424
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-33 Score=314.66 Aligned_cols=201 Identities=23% Similarity=0.399 Sum_probs=169.6
Q ss_pred eeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC-cceEEEecCCCCCCCCCCHHHHHH
Q 000628 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP-QRTCAYISQHDLHHGEMTVRETLD 267 (1383)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~E~l~ 267 (1383)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999987 8999999998764322 357999999999999999999998
Q ss_pred HhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCChHH
Q 000628 268 FSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGISGGQ 347 (1383)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGq 347 (1383)
+.... ... . .. .....++.+++.+||++..++.+.+ |||||
T Consensus 94 ~~~~~-~~~--~-----------------~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--L-----------------NA--------------AQREKLHAIARQMGIEDLLARLPGQ-----LSGGQ 134 (232)
T ss_pred ccccc-ccC--C-----------------CH--------------HHHHHHHHHHHHcCcHHHHhCCccc-----CCHHH
Confidence 75321 000 0 00 0012356678899999888888876 99999
Q ss_pred HHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEEecC
Q 000628 348 KKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVYQGP 427 (1383)
Q Consensus 348 kqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~~G~ 427 (1383)
||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSL-EDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH-HHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998765567777776655 47788999999999999999999
Q ss_pred hhHHH
Q 000628 428 RDNVL 432 (1383)
Q Consensus 428 ~~~~~ 432 (1383)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88775
No 425
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=321.18 Aligned_cols=215 Identities=20% Similarity=0.269 Sum_probs=173.2
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKIS 929 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~ 929 (1383)
..+.++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|.... + +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3678888887542 24699999999999999999999999999999999996431 1 247999999
Q ss_pred CccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000628 930 GYPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVG 1000 (1383)
Q Consensus 930 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g 1000 (1383)
|.+... ..+++.++|++|++.+++. ||.||+.+....+. .. ...++.++++++.+++.. ..+..
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 158 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK-- 158 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC--
Confidence 987531 2345689999999888775 99999987643321 11 122344677888888742 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEE
Q 000628 1001 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLL 1080 (1383)
Q Consensus 1001 ~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l 1080 (1383)
+..|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|
T Consensus 159 ---~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l 233 (274)
T PRK14265 159 ---GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFF 233 (274)
T ss_pred ---cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999999975 799999999986 577889999999
Q ss_pred e--------cCcEEEEecCC
Q 000628 1081 K--------RGGRVIYAGPL 1092 (1383)
Q Consensus 1081 ~--------~gG~~~~~g~~ 1092 (1383)
+ +.|++++.|+.
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred ecccccccccCceEEEeCCH
Confidence 7 25899999986
No 426
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-33 Score=317.26 Aligned_cols=206 Identities=19% Similarity=0.320 Sum_probs=164.0
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CCcceEEEecCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 257 (1383)
++|+|+|++|++|++++|+||||||||||+++|+|.++ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 58999999999999999999999999999999999986 3212489999999987531 1245799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc----cccc
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADT 333 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 333 (1383)
+. ||+||+.|..+..+.... .+ ....++.+++.+||.+ ..++
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~-------------------~~--------------~~~~~~~~l~~~~l~~~~~~~l~~ 151 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK-------------------KK--------------LQEIVEKSLKDVALWDEVKDRLHT 151 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH-------------------HH--------------HHHHHHHHHHHcCCchhhhhhhhC
Confidence 75 999999875332211000 00 0112345677777753 2344
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.++ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. +.|+|++.|++ .++.+++|+
T Consensus 152 ~~~-----~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivtH~~-~~~~~~~d~ 223 (259)
T PRK14274 152 QAL-----SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--KYTIVIVTHNM-QQAARVSDQ 223 (259)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEEcCH-HHHHHhCCE
Confidence 444 4999999999999999999999999999999999999999999999864 56777776654 478889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
+++|++|+++.+|+++++.
T Consensus 224 i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 224 TAFFYMGELVECNDTNKMF 242 (259)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998864
No 427
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.9e-33 Score=316.13 Aligned_cols=213 Identities=25% Similarity=0.305 Sum_probs=168.4
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc--CCCCCceeEEEECCeeCCCCCC----cceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL--GKDLRASGKITYCGHELNEFVP----QRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~~~~~ 257 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|+++..... +..++|++|++.++
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999995 565 8999999998765332 23489999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-cccccccc
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTMVG 336 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg 336 (1383)
+.+|++|++.+......... .+ .. .+.+ +....++.+++.+||+ ...++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~----------~~-----~~-~~~~-----------~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSAR----------GE-----EP-LDLL-----------DFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhccc----------cc-----cc-ccHH-----------HHHHHHHHHHHHcCCchhhcccccc
Confidence 99999999987533211000 00 00 0000 0012356788899997 45666654
Q ss_pred CcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhh-cCeEE
Q 000628 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDL-FDDII 415 (1383)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~-~D~i~ 415 (1383)
. .|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++... +|+++
T Consensus 143 ~----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~vsH~~-~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 E----GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PDRSFLIITHYQ-RLLNYIKPDYVH 216 (243)
T ss_pred c----CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCcEEEEEEecH-HHHHhhcCCeEE
Confidence 1 3999999999999999999999999999999999999999999999865 467777776665 466677 89999
Q ss_pred EEcCCeEEEecChhHHH
Q 000628 416 LLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1383)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999987654
No 428
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.3e-33 Score=314.82 Aligned_cols=209 Identities=22% Similarity=0.361 Sum_probs=168.3
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 477888886542 3469999999999999999999999999999999999754 3479999999865
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000628 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~~LSg 1009 (1383)
.. ...++.++|++|++.+++ .||+||+.+....+.. . ...+.++++++.+++. ...+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 234567999999988877 4999999875433211 1 1124578899999995 355554 457999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|+++ ++ +.+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998754 899999999975 34 57999999964443444
Q ss_pred ec
Q 000628 1089 AG 1090 (1383)
Q Consensus 1089 ~g 1090 (1383)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 44
No 429
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=350.77 Aligned_cols=216 Identities=29% Similarity=0.351 Sum_probs=178.2
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 367788876542 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Ch----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000628 934 NQ----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLST 1009 (1383)
Q Consensus 934 ~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSg 1009 (1383)
.. ...++.+||++|++.+++.+||.||+.+.............+.++.++++++.++|.+..+.. +..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCH
Confidence 32 224567999999999999999999998853211111112334456788999999998766665 457999
Q ss_pred HHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEe
Q 000628 1010 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYA 1089 (1383)
Q Consensus 1010 GqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1089 (1383)
||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++...||++++|.+ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999976 56678999999985 788776
Q ss_pred cC
Q 000628 1090 GP 1091 (1383)
Q Consensus 1090 g~ 1091 (1383)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 65
No 430
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.8e-33 Score=318.12 Aligned_cols=198 Identities=26% Similarity=0.367 Sum_probs=168.1
Q ss_pred EeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCHH
Q 000628 882 LLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVTVY 958 (1383)
Q Consensus 882 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 958 (1383)
+|+|||+++++||+++|+|+||||||||+++|+|... . +|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~--~-~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP--G-SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--C-CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999763 2 7999999987532 23345689999998888889999
Q ss_pred HHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCCceee
Q 000628 959 ESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1031 (1383)
Q Consensus 959 E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~-------~p~illLD 1031 (1383)
||+.+.... ....++..+.++++++.++|.+..++. +..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRS-----VNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 112233345688999999998776665 35799999999999999998 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCC
Q 000628 1032 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLG 1093 (1383)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1093 (1383)
|||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|+..
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999877999999999975 57788999999985 8999988753
No 431
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=320.28 Aligned_cols=209 Identities=25% Similarity=0.400 Sum_probs=171.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~l 260 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999999887 899999999875432 235699999999888889
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||.||+.++..... ..+ +..+ .+ ....++.+++.+||++..++.+++
T Consensus 92 tv~~~i~~~~~~~~--~~~-------------~~~~-~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 138 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLW-------------GRLS-AE--------------DNARVNQAMEQTRINHLADRRLTD--- 138 (255)
T ss_pred cHHHHHHhccchhh--hhc-------------cCCC-HH--------------HHHHHHHHHHHcCCHHHHcCCccc---
Confidence 99999988531000 000 0000 00 011345678889998888888776
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|++|
T Consensus 139 --LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~~~tiii~tH~~-~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 139 --LSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-QGKTVVTVLHDL-NQASRYCDHLVVLANG 214 (255)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEECCH-HHHHHhcCEEEEEECC
Confidence 999999999999999999999999999999999999999999999875 367777776654 4788999999999999
Q ss_pred eEEEecChhHHH
Q 000628 421 QIVYQGPRDNVL 432 (1383)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1383)
+++..|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999988763
No 432
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=317.52 Aligned_cols=206 Identities=20% Similarity=0.294 Sum_probs=163.6
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CCcceEEEecCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 257 (1383)
++|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 58999999999999999999999999999999999986 2112389999999987431 1246799999998888
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc----ccccc
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICADT 333 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 333 (1383)
+ .||+||+.+......... . .+ ....++.+++.+||. +..+.
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~---------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS---------R----------AE--------------MDERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC---------H----------HH--------------HHHHHHHHHHHcCCChhhHHHHhc
Confidence 7 899999987643211000 0 00 011245677788874 33455
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|+ ..++.+++|+
T Consensus 153 ~~~~-----LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~~tiii~sH~-~~~~~~~~d~ 224 (260)
T PRK10744 153 SGYS-----LSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ--DYTVVIVTHN-MQQAARCSDY 224 (260)
T ss_pred CCCC-----CCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCC-HHHHHHhCCE
Confidence 5544 999999999999999999999999999999999999999999999853 5676666655 4577889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
+++|++|+++..|+.+++.
T Consensus 225 i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 225 TAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 433
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-33 Score=311.75 Aligned_cols=215 Identities=24% Similarity=0.310 Sum_probs=172.1
Q ss_pred cceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC-C-CCCceeEEEECCeeCCCCCC-------cceEEEecCC
Q 000628 183 SVRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG-K-DLRASGKITYCGHELNEFVP-------QRTCAYISQH 253 (1383)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~ 253 (1383)
...+++||||++++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.... .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 4 34567999999997654432 2579999999
Q ss_pred C--CCCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccc
Q 000628 254 D--LHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICA 331 (1383)
Q Consensus 254 ~--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 331 (1383)
+ .+.|.+||.+.+.-..+...... . ..+....+..+|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------~------------------------~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------S------------------------KKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------h------------------------hHHHHHHHHHHHHHcCCCCHH
Confidence 6 67888999998865433211000 0 011123456688999998632
Q ss_pred cccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhc
Q 000628 332 DTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLF 411 (1383)
Q Consensus 332 dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~ 411 (1383)
. +-+.....|||||||||.||.||+.+|++||.||||++||..++.+|++.|+++.++.+.+++ .++|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aii-lITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALI-LITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEE-EEeCCHHHHHHhc
Confidence 1 112334459999999999999999999999999999999999999999999999986665555 4556677899999
Q ss_pred CeEEEEcCCeEEEecChhHHH
Q 000628 412 DDIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 412 D~i~lL~~G~iv~~G~~~~~~ 432 (1383)
|+|+||+.|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999875
No 434
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=351.27 Aligned_cols=207 Identities=26% Similarity=0.335 Sum_probs=173.6
Q ss_pred cceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccCCCCCCC
Q 000628 879 RLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDIHSPY 954 (1383)
Q Consensus 879 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~~ 954 (1383)
++.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 10 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 10 GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 35699999999999999999999999999999999997653 47999999987532 2235679999999988899
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000628 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1383)
Q Consensus 955 lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1383)
+||+||+.+............++..+.++++++.+++.+..++. +..|||||||||+||++|+.+|++|||||||
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGq~qrv~lA~al~~~p~lllLDEPt 162 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAK-----VATLSVSQMQMIEIAKAFSYNAKIVIMDEPT 162 (491)
T ss_pred CCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 99999998753211111112333445688999999998777766 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1035 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
+|||+.++..+.+.|+++++.|+|||++||+++ ++...||++++|.+ |+++..|+..+
T Consensus 163 ~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 163 SSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 999999999999999999888999999999975 56678999999985 89999988654
No 435
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-34 Score=307.60 Aligned_cols=197 Identities=27% Similarity=0.434 Sum_probs=171.5
Q ss_pred eeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-------CcceEEEecCCCCCCCCC
Q 000628 188 KDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 188 ~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~~~~~~~l 260 (1383)
=++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+.. .+|.+|||+|+..+||++
T Consensus 15 l~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~ 91 (352)
T COG4148 15 LDANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHY 91 (352)
T ss_pred EEEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccce
Confidence 3677887775799999999999999999999999998 999999998764322 258899999999999999
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||+.||.|+...- .....|.+...||++|..+.....
T Consensus 92 tVrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~P~~--- 128 (352)
T COG4148 92 TVRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRYPGT--- 128 (352)
T ss_pred EEecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhCCCc---
Confidence 9999999974311 011246788999999999999887
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
|||||||||+|||||++.|++|+||||.+.||-....+++-.|.+++++.+.-++. +.|-..|+.+++|+|++|++|
T Consensus 129 --LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~IPIlY-VSHS~~Ev~RLAd~vV~le~G 205 (352)
T COG4148 129 --LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEINIPILY-VSHSLDEVLRLADRVVVLENG 205 (352)
T ss_pred --cCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCCCEEE-EecCHHHHHhhhheEEEecCC
Confidence 99999999999999999999999999999999999999999999999876655554 456667999999999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
++...|+.+++..
T Consensus 206 kV~A~g~~e~v~~ 218 (352)
T COG4148 206 KVKASGPLEEVWG 218 (352)
T ss_pred eEEecCcHHHHhc
Confidence 9999999998853
No 436
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.9e-33 Score=350.65 Aligned_cols=209 Identities=25% Similarity=0.402 Sum_probs=169.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+++.
T Consensus 331 ~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~- 406 (544)
T TIGR01842 331 KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPG- 406 (544)
T ss_pred ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCCcccccc-
Confidence 35899999999999999999999999999999999999997 9999999999876543 4689999999999875
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++||+.+.... .+.++..+++...+ .+..++ .|++..||.+|+ .+
T Consensus 407 ti~~Ni~~~~~~-------------------------~~~~~~~~~~~~~~------~~~~i~--~l~~gl~t~~~~-~g 452 (544)
T TIGR01842 407 TVAENIARFGEN-------------------------ADPEKIIEAAKLAG------VHELIL--RLPDGYDTVIGP-GG 452 (544)
T ss_pred cHHHHHhccCCC-------------------------CCHHHHHHHHHHhC------hHHHHH--hCccccccccCC-Cc
Confidence 999999753210 00111111211111 122333 356678899986 46
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
+.||||||||++||||++++|++++|||||+|||+.++..+.+.|+++.. .++|+|++.|++. ..+.||+|++|++|
T Consensus 453 ~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~ith~~~--~~~~~d~i~~l~~G 529 (544)
T TIGR01842 453 ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGITVVVITHRPS--LLGCVDKILVLQDG 529 (544)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCCEEEEEeCCHH--HHHhCCEEEEEECC
Confidence 67999999999999999999999999999999999999999999998753 3678888888763 56889999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
++++.|+++++.+
T Consensus 530 ~i~~~g~~~~l~~ 542 (544)
T TIGR01842 530 RIARFGERDEVLA 542 (544)
T ss_pred EEEeeCCHHHHhh
Confidence 9999999988753
No 437
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=5.6e-34 Score=320.63 Aligned_cols=196 Identities=23% Similarity=0.395 Sum_probs=154.5
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVT 956 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 956 (1383)
+.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++.+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 459999999999999999999999999999999999765 347999999986532 334677999999987764 69
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHH-----HHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCce
Q 000628 957 VYESLLYSAWLRLSSDVDTKKRK-----MFVDEVMELV--ELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1383)
Q Consensus 957 v~E~l~f~~~l~~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~ill 1029 (1383)
|.||+.+... ........ ..+++.++.+ ++....+.. +..|||||||||+|||+|+.+|++|+
T Consensus 92 v~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 9999976421 11111110 1122333333 333322332 46899999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|||||+|||+.++..+.+.|++++ +|+|||+++|+++ ++ +.+|++++|.+ |++++.|+.
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-GRIVEQGSH 220 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999986 4899999999986 34 57999999985 899998875
No 438
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=320.70 Aligned_cols=215 Identities=22% Similarity=0.244 Sum_probs=171.7
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 478899887552 2359999999999999999999999999999999999653 1 13579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK----SLNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~~g~ 1001 (1383)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87531 234567999999998877 499999988653221 111222344567777777543 222332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 799999999976 4667899999997
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 5 899988874
No 439
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=325.67 Aligned_cols=206 Identities=19% Similarity=0.307 Sum_probs=167.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCC----C----CCcceEEEecCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNE----F----VPQRTCAYISQHDL 255 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~----~----~~~~~~~yv~Q~~~ 255 (1383)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 24 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~ 100 (289)
T PRK13645 24 FKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPE 100 (289)
T ss_pred cceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcc
Confidence 35899999999999999999999999999999999999887 8999999998642 1 12457999999974
Q ss_pred C-CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-ccccc
Q 000628 256 H-HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADT 333 (1383)
Q Consensus 256 ~-~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 333 (1383)
. +...||+||+.|.....+.. .. + ....++.+++.++|+ +..++
T Consensus 101 ~~~~~~tv~enl~~~~~~~~~~----------~~----------~--------------~~~~~~~ll~~~~L~~~~~~~ 146 (289)
T PRK13645 101 YQLFQETIEKDIAFGPVNLGEN----------KQ----------E--------------AYKKVPELLKLVQLPEDYVKR 146 (289)
T ss_pred hhhhhhHHHHHHHHHHHHcCCC----------HH----------H--------------HHHHHHHHHHHcCCChhHhcC
Confidence 2 33469999998853221100 00 0 011245677889995 56777
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..++|+|++.|++ .++.++||+
T Consensus 147 ~~~~-----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~-~~~~~~~d~ 220 (289)
T PRK13645 147 SPFE-----LSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNM-DQVLRIADE 220 (289)
T ss_pred Chhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCE
Confidence 7766 9999999999999999999999999999999999999999999998765467777776654 478899999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
|++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 221 VIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988764
No 440
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.3e-33 Score=362.34 Aligned_cols=208 Identities=25% Similarity=0.417 Sum_probs=171.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
+++|+|+|++++||+.++|+|+||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 470 ~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~-~ 545 (694)
T TIGR01846 470 PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFS-R 545 (694)
T ss_pred ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccCCeehh-h
Confidence 35899999999999999999999999999999999999997 9999999999887653 578999999998886 5
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++|||.++.. +.+.++..+++...+. +..++ .|++..||.+|+. +
T Consensus 546 ti~eNi~~~~~-------------------------~~~~~~i~~a~~~~~l------~~~i~--~lp~gl~t~i~~~-g 591 (694)
T TIGR01846 546 SIRDNIALCNP-------------------------GAPFEHVIHAAKLAGA------HDFIS--ELPQGYNTEVGEK-G 591 (694)
T ss_pred hHHHHHhcCCC-------------------------CCCHHHHHHHHHHcCh------HHHHH--hCcCccCcEecCC-C
Confidence 99999987421 1111222222222211 11222 3677889999874 6
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
++||||||||++||||++.+|++++||||||+||+.++..+.+.|+++. .++|+|++.|++ +..+.||+|++|++|
T Consensus 592 ~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~itH~~--~~~~~~d~ii~l~~G 667 (694)
T TIGR01846 592 ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC--RGRTVIIIAHRL--STVRACDRIIVLEKG 667 (694)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--CCCEEEEEeCCh--HHHHhCCEEEEEeCC
Confidence 7799999999999999999999999999999999999999999999875 367888888776 456779999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
+++++|+++++++
T Consensus 668 ~i~~~g~~~~l~~ 680 (694)
T TIGR01846 668 QIAESGRHEELLA 680 (694)
T ss_pred EEEEeCCHHHHHH
Confidence 9999999999864
No 441
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=4.1e-33 Score=316.58 Aligned_cols=221 Identities=24% Similarity=0.300 Sum_probs=173.6
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+..|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 367888876542 2459999999999999999999999999999999999621113579999999875
Q ss_pred Ch---hcccc-eEEEEccCCCCCCCCCHHHHHHHHHHhhcC----CCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000628 934 NQ---ETFAR-VSGYCEQNDIHSPYVTVYESLLYSAWLRLS----SDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGV 1004 (1383)
Q Consensus 934 ~~---~~~~~-~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~ 1004 (1383)
.. ...++ .++|++|++.+++.+|+.|++.+....... .+....+..+.+.++++.+++. ...++.++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 43 12222 478999999999999999998775432110 1111223345678899999996 34555432
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-hceEEEEecC
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRG 1083 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~g 1083 (1383)
.+|||||||||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|. +
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~-~ 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQ-N 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEe-C
Confidence 259999999999999999999999999999999999999999999999877999999999975 34444 79999997 5
Q ss_pred cEEEEecCCC
Q 000628 1084 GRVIYAGPLG 1093 (1383)
Q Consensus 1084 G~~~~~g~~~ 1093 (1383)
|++++.|+..
T Consensus 228 G~i~~~~~~~ 237 (252)
T CHL00131 228 GKIIKTGDAE 237 (252)
T ss_pred CEEEEecChh
Confidence 8999998763
No 442
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.1e-33 Score=313.09 Aligned_cols=195 Identities=25% Similarity=0.361 Sum_probs=161.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCC-----CCcceEEEecCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHHG 258 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~ 258 (1383)
..+|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 45999999999999999999999999999999999999887 99999999987421 12467999999999999
Q ss_pred CCCHHHHHHHhhh-ccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 259 EMTVRETLDFSGR-CLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 259 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
.+||+||+.+... .++.. .. +....++.+++.+||++..++.+.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 135 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS----------KA------------------------EAEERALELLEKVGLADKADAYPAQ 135 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCHhHhhhCccc
Confidence 9999999987532 11000 00 0011245678889998877887766
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|+ ..++.+++|+|++|
T Consensus 136 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tvi~~sh~-~~~~~~~~d~i~~l 208 (213)
T cd03262 136 -----LSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EGMTMVVVTHE-MGFAREVADRVIFM 208 (213)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cCCEEEEEeCC-HHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999876 36677766554 55788899999999
Q ss_pred cCCeE
Q 000628 418 SEGQI 422 (1383)
Q Consensus 418 ~~G~i 422 (1383)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 443
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.6e-33 Score=318.68 Aligned_cols=209 Identities=28% Similarity=0.415 Sum_probs=171.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 46999999999999999999999999999999999999887 8999999998765432 34699999998878889
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
||+||+.++..... .. ... +..+ ....++..++.+||.+..++.+++
T Consensus 91 tv~e~l~~~~~~~~---------~~------~~~-~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (256)
T TIGR03873 91 TVRDVVALGRIPHR---------SL------WAG-DSPH--------------DAAVVDRALARTELSHLADRDMST--- 137 (256)
T ss_pred CHHHHHHhcchhhh---------hh------ccC-CCHH--------------HHHHHHHHHHHcCcHhhhcCCccc---
Confidence 99999987421000 00 000 0000 011345678889998877888776
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.+ .+.|+|++.|++ .++.+++|+|++|++|
T Consensus 138 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~-~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 138 --LSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-TGVTVVAALHDL-NLAASYCDHVVVLDGG 213 (256)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCCH-HHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999875 366777776655 4788999999999999
Q ss_pred eEEEecChhHHH
Q 000628 421 QIVYQGPRDNVL 432 (1383)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1383)
+++..|+.+++.
T Consensus 214 ~i~~~g~~~~~~ 225 (256)
T TIGR03873 214 RVVAAGPPREVL 225 (256)
T ss_pred CEEEecCHHHhh
Confidence 999999988763
No 444
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1e-32 Score=306.99 Aligned_cols=204 Identities=19% Similarity=0.284 Sum_probs=153.4
Q ss_pred CCcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcC
Q 000628 851 QPLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG 930 (1383)
Q Consensus 851 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g 930 (1383)
.|..+.++||+|.++ +.++++++++|-|.-...+||+||||.||||||++|.|..++ ..|+..-|
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn- 647 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN- 647 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc-
Confidence 455677888887553 345789999999999999999999999999999999998764 35654322
Q ss_pred ccCChhcccceEEEEccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000628 931 YPKNQETFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLS 1008 (1383)
Q Consensus 931 ~~~~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LS 1008 (1383)
.+-+||+.-|... +...-|.-|.|.-.. +.+.+ .....|-.+||...++++- ++.||
T Consensus 648 -------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~F------Nlpyq----~ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 648 -------HRLRIGWFDQHANEALNGEETPVEYLQRKF------NLPYQ----EARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred -------ceeeeechhhhhHHhhccccCHHHHHHHhc------CCChH----HHHHHhhhhhhhhccceEe----eeecC
Confidence 2335888877643 334456666653211 22222 2456788899988888763 67899
Q ss_pred HHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEE
Q 000628 1009 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIY 1088 (1383)
Q Consensus 1009 gGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1088 (1383)
||||-||++|---++.|+||||||||++||..+...+-+.|++. ...||+++|+-.+ +.+--+.+.++.+.|.-..
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhc
Confidence 99999999999999999999999999999999999999999886 4579999998653 5555577788877665555
Q ss_pred ecCCCc
Q 000628 1089 AGPLGH 1094 (1383)
Q Consensus 1089 ~g~~~~ 1094 (1383)
.|..++
T Consensus 783 dGdFeD 788 (807)
T KOG0066|consen 783 DGDFED 788 (807)
T ss_pred cccHHH
Confidence 665543
No 445
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-33 Score=318.76 Aligned_cols=207 Identities=20% Similarity=0.308 Sum_probs=164.9
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCC-----CCcceEEEecCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 257 (1383)
.+|+|+|++|+||++++|+|||||||||||++|+|.++|. ...+|+|.++|+++... ..++.++|++|++..+
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 112 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPF 112 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCC
Confidence 5999999999999999999999999999999999998741 01389999999987531 1246799999998888
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc----cccc
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADT 333 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 333 (1383)
+. ||.||+.|+....+... +..+ ....++.+++.+||.+ ..++
T Consensus 113 ~~-tv~enl~~~~~~~~~~~------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 159 (267)
T PRK14235 113 PK-SIYENVAYGPRIHGLAR------------------SKAE--------------LDEIVETSLRKAGLWEEVKDRLHE 159 (267)
T ss_pred CC-cHHHHHHHHHHhccccc------------------chHH--------------HHHHHHHHHHHcCCchhhhHHhhC
Confidence 74 99999988643221100 0000 0112456788888864 2344
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|+ ..++.+++|+
T Consensus 160 ~~~~-----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~~tiiivtH~-~~~~~~~~d~ 231 (267)
T PRK14235 160 PGTG-----LSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--NYTIVIVTHS-MQQAARVSQR 231 (267)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--CCeEEEEEcC-HHHHHhhCCE
Confidence 4544 999999999999999999999999999999999999999999999865 5677776655 4577889999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
+++|++|+++.+|+.+++.
T Consensus 232 v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 232 TAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 446
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.6e-33 Score=308.74 Aligned_cols=199 Identities=22% Similarity=0.288 Sum_probs=165.8
Q ss_pred eeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-CcceEEEecCCCCCCCCCCHHH
Q 000628 186 ILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-PQRTCAYISQHDLHHGEMTVRE 264 (1383)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~E 264 (1383)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999987 999999999875432 2467999999999999999999
Q ss_pred HHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccCCCC
Q 000628 265 TLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRRGIS 344 (1383)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 344 (1383)
|+.+...... . ... +....++.+++.+||++..++.+.+ ||
T Consensus 90 n~~~~~~~~~-~-------------------~~~--------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-K-------------------LNA--------------EQQEKVVDAAQQVGIADYLDRLPEQ-----LS 130 (213)
T ss_pred HHHhHhhccC-C-------------------ccH--------------HHHHHHHHHHHHcCcHHHhhCCccc-----CC
Confidence 9986422100 0 000 0011245678899998878887766 99
Q ss_pred hHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCeEEE
Q 000628 345 GGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQIVY 424 (1383)
Q Consensus 345 GGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~iv~ 424 (1383)
|||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|+ ..++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~-~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHH-LSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHhhcCeEEEEECCeEEE
Confidence 9999999999999999999999999999999999999999999876446677776655 457788999999999999998
Q ss_pred ecC
Q 000628 425 QGP 427 (1383)
Q Consensus 425 ~G~ 427 (1383)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 447
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-34 Score=294.90 Aligned_cols=209 Identities=25% Similarity=0.390 Sum_probs=180.0
Q ss_pred ccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC---hhcccceEEEEccCCCCC
Q 000628 876 GEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDIHS 952 (1383)
Q Consensus 876 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~ 952 (1383)
.++.+.+|++||..|++|.+++|+|||||||||||.++++... ..+|+|+++|.+.. ...+++.++.+-|+....
T Consensus 10 ~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~ 87 (252)
T COG4604 10 SYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHIN 87 (252)
T ss_pred hhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhh
Confidence 3456789999999999999999999999999999999998655 34799999998764 355677888899998888
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeC
Q 000628 953 PYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1032 (1383)
Q Consensus 953 ~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDE 1032 (1383)
..+||+|-+.|+..-.. .....++.+..++++++.++|+++.|+.. ..||||||||.-||+.++.+.+.++|||
T Consensus 88 ~rlTV~dLv~FGRfPYS-qGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDE 161 (252)
T COG4604 88 SRLTVRDLVGFGRFPYS-QGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDE 161 (252)
T ss_pred heeEHHHHhhcCCCccc-CCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecC
Confidence 89999999999743221 22334555677999999999999999984 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1033 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1033 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
|.++||...+..+|+.|++++++ |+|||++.||.+. .....|+++.|++ |+++..|++++
T Consensus 162 PLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~e 222 (252)
T COG4604 162 PLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDE 222 (252)
T ss_pred cccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHH
Confidence 99999999999999999999977 9999999999763 4456799999985 89999999854
No 448
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-33 Score=318.90 Aligned_cols=214 Identities=21% Similarity=0.270 Sum_probs=172.0
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~g 930 (1383)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 467888876552 24699999999999999999999999999999999996431 1 2479999999
Q ss_pred ccCC-----hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000628 931 YPKN-----QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGL 1001 (1383)
Q Consensus 931 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~ 1001 (1383)
.+.. ....++.++|++|++.+++ .||.||+.+....+. .. ...++.++++++.+++.+ ..+..
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 148 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQS--- 148 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcCC---
Confidence 8652 2234567999999998887 499999987653321 11 123345677788888743 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.||++++|+
T Consensus 149 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~ 224 (264)
T PRK14243 149 --GLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFN 224 (264)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999999975 589999999986 6788999999997
Q ss_pred c--------CcEEEEecCC
Q 000628 1082 R--------GGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~--------gG~~~~~g~~ 1092 (1383)
+ .|++++.|+.
T Consensus 225 ~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 225 VELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccccccCceEEEeCCH
Confidence 2 5899999875
No 449
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=3.7e-33 Score=317.07 Aligned_cols=214 Identities=26% Similarity=0.306 Sum_probs=170.6
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc--
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP-- 932 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~-- 932 (1383)
+.++|+++.++ ...+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (253)
T TIGR02323 4 LQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSGA 68 (253)
T ss_pred EEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEeccccc
Confidence 67777776542 2458999999999999999999999999999999999765 347999999875
Q ss_pred ---CCh---h----cccceEEEEccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-ccccccc
Q 000628 933 ---KNQ---E----TFARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-SLNDSMV 999 (1383)
Q Consensus 933 ---~~~---~----~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~ 999 (1383)
... . ..++.++|++|++. +.+.+|+.||+.+..... .. .......+.++++++.+++. ...+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~- 145 (253)
T TIGR02323 69 ELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL- 145 (253)
T ss_pred ccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC-
Confidence 321 1 12356899999975 445679999987543211 11 11123345688999999996 355554
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEE
Q 000628 1000 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELL 1078 (1383)
Q Consensus 1000 g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~ 1078 (1383)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++.+.+|+++
T Consensus 146 ----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~ 220 (253)
T TIGR02323 146 ----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLL 220 (253)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 4579999999999999999999999999999999999999999999998754 899999999975 5666899999
Q ss_pred EEecCcEEEEecCC
Q 000628 1079 LLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1079 ~l~~gG~~~~~g~~ 1092 (1383)
+|.+ |++++.|+.
T Consensus 221 ~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 221 VMQQ-GRVVESGLT 233 (253)
T ss_pred EEEC-CEEEEECCH
Confidence 9975 899988874
No 450
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=3.3e-33 Score=354.48 Aligned_cols=209 Identities=25% Similarity=0.404 Sum_probs=171.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
.++|+|+|+.++||+.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 345 ~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 420 (571)
T TIGR02203 345 RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQDVVLFN-D 420 (571)
T ss_pred CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccCccccc-c
Confidence 35899999999999999999999999999999999999997 8999999999876653 467999999998885 5
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++|||.++..- +.+.++..+++...+ .+..+ -.|++..||.+|+. +
T Consensus 421 Ti~~Ni~~~~~~------------------------~~~~~~i~~~l~~~~------l~~~i--~~lp~gldt~i~~~-g 467 (571)
T TIGR02203 421 TIANNIAYGRTE------------------------QADRAEIERALAAAY------AQDFV--DKLPLGLDTPIGEN-G 467 (571)
T ss_pred cHHHHHhcCCCC------------------------CCCHHHHHHHHHHcC------hHHHH--HhCcCcccceecCC-C
Confidence 999999875210 011111222221111 11112 23677889999974 6
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
+.||||||||++||||++.+|+|++||||||+||+.++..+.+.|++..+ ++|+|+..|++ +..+.||+|++|++|
T Consensus 468 ~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~--~~tiIiitH~~--~~~~~~D~ii~l~~g 543 (571)
T TIGR02203 468 VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQ--GRTTLVIAHRL--STIEKADRIVVMDDG 543 (571)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhC--CCEEEEEehhh--HHHHhCCEEEEEeCC
Confidence 77999999999999999999999999999999999999999999998753 67888888776 678899999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
+++..|+++++.+
T Consensus 544 ~i~~~g~~~~l~~ 556 (571)
T TIGR02203 544 RIVERGTHNELLA 556 (571)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999864
No 451
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.2e-33 Score=322.20 Aligned_cols=211 Identities=22% Similarity=0.305 Sum_probs=172.0
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.+.++|+++.++. +...+|+|||++|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 3678888876531 12359999999999999999999999999999999999764 269999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000628 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGL------PGV 1004 (1383)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~------~~~ 1004 (1383)
.. ..+++.++||+|++.+++. ||+||+.... ... ++.++++++.++|.+..+..++. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~~-tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFSG-TFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccchh-hHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 32 3456789999999998874 9999995321 111 23467888999998765554321 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCc
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1084 (1383)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|++.. .++|||+++|+++ ....+|++++|.+ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 4899999999974 4456999999975 8
Q ss_pred EEEEecCCC
Q 000628 1085 RVIYAGPLG 1093 (1383)
Q Consensus 1085 ~~~~~g~~~ 1093 (1383)
++++.|++.
T Consensus 213 ~i~~~g~~~ 221 (275)
T cd03289 213 KVRQYDSIQ 221 (275)
T ss_pred eEeecCCHH
Confidence 999999864
No 452
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-33 Score=313.87 Aligned_cols=208 Identities=19% Similarity=0.285 Sum_probs=165.1
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~l 260 (1383)
+.+|+|+|+++++|++++|+||||||||||+++|+|.+++....+|+|.++|+++.+.. .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 46999999999999999999999999999999999997531123899999999886532 2457999999998887 6
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc----ccccccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADTMVG 336 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt~vg 336 (1383)
||+||+.++...++... +... ....++.+++.+||.. ..+..+
T Consensus 94 tv~eni~~~~~~~~~~~------------------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~~~- 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIK------------------NKDE--------------EEALVVDCLQKVGLFEEVKDKLKQNA- 140 (246)
T ss_pred cHHHHhhhHHhhcCccc------------------ChHH--------------HHHHHHHHHHHcCCChhhhHHhcCCc-
Confidence 99999988643221100 0000 0112456788888853 233333
Q ss_pred CcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEE
Q 000628 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1383)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~l 416 (1383)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|++++.|+ ..++.+++|+|++
T Consensus 141 ----~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~-~~~~~~~~d~i~~ 213 (246)
T PRK14269 141 ----LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH--NLSMIMVTHN-MQQGKRVADYTAF 213 (246)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecC-HHHHHhhCcEEEE
Confidence 45999999999999999999999999999999999999999999999864 6676766655 4578889999999
Q ss_pred EcCCeEEEecChhHHH
Q 000628 417 LSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 417 L~~G~iv~~G~~~~~~ 432 (1383)
|++|++++.|+.+++.
T Consensus 214 l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 214 FHLGELIEFGESKEFF 229 (246)
T ss_pred EECCEEEEECCHHHHH
Confidence 9999999999988764
No 453
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.4e-33 Score=351.51 Aligned_cols=208 Identities=25% Similarity=0.357 Sum_probs=170.4
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
.++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+|+ .
T Consensus 328 ~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~-~ 403 (569)
T PRK10789 328 HPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVS---EGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFS-D 403 (569)
T ss_pred CccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCEEEECCEEHhhCCHHHHHhheEEEccCCeecc-c
Confidence 35899999999999999999999999999999999999997 9999999999876543 467999999998886 5
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++|||.++..- .+.++..+++...+. .+ ....|++..||.+|+. +
T Consensus 404 ti~~Ni~~~~~~-------------------------~~~~~~~~~~~~~~l-----~~---~i~~lp~gl~t~~~~~-g 449 (569)
T PRK10789 404 TVANNIALGRPD-------------------------ATQQEIEHVARLASV-----HD---DILRLPQGYDTEVGER-G 449 (569)
T ss_pred cHHHHHhcCCCC-------------------------CCHHHHHHHHHHcCC-----HH---HHHhCcCcccceecCC-C
Confidence 999999875210 001111111111111 01 1235778889999873 5
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
..||||||||++||||++.+|++++|||||++||+.++..+.+.|+++. .++|+|++.|++ +..+.+|+|++|++|
T Consensus 450 ~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tii~itH~~--~~~~~~d~i~~l~~G 525 (569)
T PRK10789 450 VMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG--EGRTVIISAHRL--SALTEASEILVMQHG 525 (569)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEEEecch--hHHHcCCEEEEEeCC
Confidence 6799999999999999999999999999999999999999999999875 368888888876 456789999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
+++.+|+++++.+
T Consensus 526 ~i~~~g~~~~l~~ 538 (569)
T PRK10789 526 HIAQRGNHDQLAQ 538 (569)
T ss_pred EEEEecCHHHHHH
Confidence 9999999998864
No 454
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.9e-33 Score=309.40 Aligned_cols=185 Identities=29% Similarity=0.368 Sum_probs=155.8
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1383)
+.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+......++.++|++|++.+++.+||.|
T Consensus 15 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~tv~~ 92 (207)
T PRK13539 15 RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPALTVAE 92 (207)
T ss_pred eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCcchhhHhhcEEecCCCcCCCCCcHHH
Confidence 469999999999999999999999999999999999765 347999999986532225667899999988888999999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000628 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1383)
Q Consensus 960 ~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1383)
|+.+....+. .. ++.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 160 (207)
T PRK13539 93 NLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLP-----FGYLSAGQKRRVALARLLVSNRPIWILDEPTAALDA 160 (207)
T ss_pred HHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 9987553321 11 13478999999998766655 347999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
.+...+++.|++++++|+|||++||+++ .... |+++.+.
T Consensus 161 ~~~~~l~~~l~~~~~~~~tiii~sH~~~--~~~~-~~~~~~~ 199 (207)
T PRK13539 161 AAVALFAELIRAHLAQGGIVIAATHIPL--GLPG-ARELDLG 199 (207)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCCch--hhcc-CcEEeec
Confidence 9999999999998878999999999975 3344 8887664
No 455
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=5.7e-34 Score=360.24 Aligned_cols=212 Identities=28% Similarity=0.451 Sum_probs=176.7
Q ss_pred CcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc
Q 000628 852 PLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY 931 (1383)
Q Consensus 852 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~ 931 (1383)
...++|+|++|.++. ++++|+|+|++++|||.+||+||||||||||+++|.|..++ .+|+|.+||.
T Consensus 326 ~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~ 391 (567)
T COG1132 326 IGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGI 391 (567)
T ss_pred CCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCE
Confidence 345899999997742 35699999999999999999999999999999999997663 4799999998
Q ss_pred cCC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCc-------ccccccccC
Q 000628 932 PKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELK-------SLNDSMVGL 1001 (1383)
Q Consensus 932 ~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~~g~ 1001 (1383)
++. ...+|+.++||+|++.++. -||+||+.++. .+.++++ ++++++..++. +-.|+.+|.
T Consensus 392 dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vge 461 (567)
T COG1132 392 DIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDEE----IEEALKLANAHEFIANLPDGYDTIVGE 461 (567)
T ss_pred ehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHHH----HHHHHHHhChHHHHHhCcccccceecC
Confidence 764 4567889999999999987 89999999863 1223322 44444444333 245778874
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
. ...||||||||++||||++++|+||+||||||+||+.++..|++.++++. +|+|+|+++|+++ ....+|++++|+
T Consensus 462 ~-G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~ 537 (567)
T COG1132 462 R-GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLD 537 (567)
T ss_pred C-CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEE
Confidence 3 45799999999999999999999999999999999999999999999887 5789999999985 456699999998
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|+.
T Consensus 538 ~-G~i~e~G~h 547 (567)
T COG1132 538 N-GRIVERGTH 547 (567)
T ss_pred C-CEEEEecCH
Confidence 5 889999985
No 456
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-33 Score=316.32 Aligned_cols=208 Identities=22% Similarity=0.331 Sum_probs=165.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CceeEEEECCeeCCCC-----CCcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 256 (1383)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (258)
T PRK14241 17 FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNP 96 (258)
T ss_pred EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEcccccc
Confidence 359999999999999999999999999999999999986421 1389999999987421 124679999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc----cccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1383)
++.+||+||+.++....+... . .. ....++.+++.+||. +..+
T Consensus 97 ~~~~tv~~nl~~~~~~~~~~~---------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 143 (258)
T PRK14241 97 FPTMSIRDNVVAGLKLNGVRN---------K----------KD--------------LDELVEKSLRGANLWNEVKDRLD 143 (258)
T ss_pred CCCCcHHHHHHHHHHhcCCCC---------H----------HH--------------HHHHHHHHHHHcCCchhhhhHhh
Confidence 999999999987643221000 0 00 011245567788874 3445
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|+ ..++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tviivsH~-~~~~~~~~d 215 (258)
T PRK14241 144 KPGGG-----LSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--DYTIVIVTHN-MQQAARVSD 215 (258)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEecC-HHHHHHhCC
Confidence 55554 999999999999999999999999999999999999999999999864 4676666655 457889999
Q ss_pred eEEEEc------CCeEEEecChhHHH
Q 000628 413 DIILLS------EGQIVYQGPRDNVL 432 (1383)
Q Consensus 413 ~i~lL~------~G~iv~~G~~~~~~ 432 (1383)
+|++|+ +|++++.|+++++.
T Consensus 216 ~i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 216 QTAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEEecccCCCCceEEecCCHHHHH
Confidence 999996 79999999998764
No 457
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-33 Score=314.50 Aligned_cols=207 Identities=18% Similarity=0.316 Sum_probs=165.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCCC-----CcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEFV-----PQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~~~~ 256 (1383)
+.+|+|+|+++++|++++|+||||||||||+++|+|..+|. ...+|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35899999999999999999999999999999999998651 123899999999875321 24579999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc----cccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1383)
++ +||+||+.|.....+.... .+ ....++.+++.+||. +..+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~-------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK-------------------KE--------------LDKIVEWALKKAALWDEVKDDLK 142 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH-------------------HH--------------HHHHHHHHHHHcCCchhhhhHhh
Confidence 87 8999999886432211000 00 011234567777774 2344
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
+.+++ |||||||||+||+|++.+|++++|||||+|||+.++.++.+.|+++.+ +.|+|++.|+ ..++.+++|
T Consensus 143 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~tiiivsH~-~~~~~~~~d 214 (251)
T PRK14270 143 KSALK-----LSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--EYTIVIVTHN-MQQASRVSD 214 (251)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCeEEEEEcC-HHHHHHhcC
Confidence 55544 999999999999999999999999999999999999999999999875 4677766665 457889999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000628 413 DIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 413 ~i~lL~~G~iv~~G~~~~~~ 432 (1383)
++++|++|++++.|+.+++.
T Consensus 215 ~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 215 YTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEEEECCeEEEeCCHHHHh
Confidence 99999999999999998874
No 458
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-33 Score=314.64 Aligned_cols=195 Identities=20% Similarity=0.288 Sum_probs=164.7
Q ss_pred ccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 000628 878 DRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 878 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
..+.+|+|||++|++||++||+||||||||||+++|+|..+ +..|+|.++|. ++++.|+..+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCE----------EeEEecccCCCCCCcH
Confidence 34679999999999999999999999999999999999765 34799999984 3567777777788999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
.||+.+..... ....++..+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQP-----VKKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----cccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998754332 122344455678889999998777665 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
|+.++..+++.|+++++.|+|||+++|++. ++.+.+|++++|. +|++++.|+..+
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~~ 229 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIE-GGKLKDYGELDD 229 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEE-CCEEEEeCCHHH
Confidence 999999999999999877999999999975 5667899999997 488998888643
No 459
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-33 Score=299.61 Aligned_cols=157 Identities=30% Similarity=0.451 Sum_probs=141.0
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
..+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (173)
T cd03230 13 KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTV 90 (173)
T ss_pred eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCCcH
Confidence 359999999999999999999999999999999999765 347999999987542 2345679999999998888999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
.||+. ||||||||++|||+|+.+|++|+|||||+||
T Consensus 91 ~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~L 126 (173)
T cd03230 91 RENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGL 126 (173)
T ss_pred HHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCC
Confidence 99873 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecC
Q 000628 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1083 (1383)
|+.++..+.+.|++++++|.|||++||+++ ++.+.+|++++|.+|
T Consensus 127 D~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 127 DPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999877999999999975 566789999999863
No 460
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-33 Score=314.05 Aligned_cols=208 Identities=20% Similarity=0.285 Sum_probs=166.0
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CCcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 256 (1383)
..+|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999986 3212389999999987532 124679999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc----ccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 332 (1383)
++.+||+||+.++.+..+... ..+. ...++.+++.+||.. ..+
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~-------------------~~~~--------------~~~~~~~l~~~~l~~~~~~~~~ 143 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVN-------------------RSEA--------------DEIVESSLKRVALWDEVKDRLK 143 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCC-------------------HHHH--------------HHHHHHHHHHcCCchhhhHHhh
Confidence 999999999987533211000 0000 112456777888753 234
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
+.+++ |||||||||+||+|++.+|++++|||||+|||+.++.++.+.|+++++ +.|+|++.|+ ..++.++||
T Consensus 144 ~~~~~-----LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~~tiiivsH~-~~~~~~~~d 215 (252)
T PRK14256 144 SNAME-----LSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--KYTIIIVTHN-MQQAARVSD 215 (252)
T ss_pred CCcCc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCcEEEEECC-HHHHHhhCC
Confidence 44444 999999999999999999999999999999999999999999999975 4676666655 457889999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000628 413 DIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 413 ~i~lL~~G~iv~~G~~~~~~ 432 (1383)
++++|++|+++..|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 216 YTAFFYMGDLVECGETKKIF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 461
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=314.52 Aligned_cols=207 Identities=20% Similarity=0.284 Sum_probs=164.6
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCC-----CCcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 256 (1383)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35899999999999999999999999999999999998641 12389999999987532 124579999999888
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc----ccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 332 (1383)
++ .||+||+.++.+..+.. ...+ ....++.+++.++|.+ ..+
T Consensus 113 ~~-~tv~eni~~~~~~~~~~-------------------~~~~--------------~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 113 FA-KSIYENITFALERAGVK-------------------DKKV--------------LDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCC-------------------CHHH--------------HHHHHHHHHHHcCCCchhhhhhc
Confidence 87 69999998864321100 0000 0112455677888853 234
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
..+ +.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ +.++|++.|++ .++.++||
T Consensus 159 ~~~-----~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~~-~~~~~~~d 230 (267)
T PRK14237 159 KSA-----LTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK--NYTIIIVTHNM-QQAARASD 230 (267)
T ss_pred CCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEecCH-HHHHHhcC
Confidence 444 44999999999999999999999999999999999999999999999853 56777666654 47889999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000628 413 DIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 413 ~i~lL~~G~iv~~G~~~~~~ 432 (1383)
++++|++|++++.|+.+++.
T Consensus 231 ~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 231 YTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999998874
No 462
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-33 Score=314.93 Aligned_cols=218 Identities=22% Similarity=0.313 Sum_probs=172.7
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--C-ceEEEEEEEcCc
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYIEGDIKISGY 931 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-g~~~G~i~i~g~ 931 (1383)
+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|.
T Consensus 4 l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 70 (250)
T PRK14266 4 IEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGV 70 (250)
T ss_pred EEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCE
Confidence 56777776542 2469999999999999999999999999999999999642 1 124799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000628 932 PKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSG 1006 (1383)
Q Consensus 932 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~ 1006 (1383)
++.. ...++.++|++|++.+++. |+.||+.+...... ....+..++.+.++++.+++.+....... ..+..
T Consensus 71 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~ 146 (250)
T PRK14266 71 DIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLD-KSALG 146 (250)
T ss_pred EcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCccc
Confidence 7532 2345679999999988875 99999987643221 11223345668889999988542111111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEE
Q 000628 1007 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRV 1086 (1383)
Q Consensus 1007 LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~ 1086 (1383)
||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||+++|++. ++.+.+|++++|.+ |++
T Consensus 147 LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~i 223 (250)
T PRK14266 147 LSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GEI 223 (250)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-CeE
Confidence 999999999999999999999999999999999999999999999864 899999999986 67778899999975 899
Q ss_pred EEecCC
Q 000628 1087 IYAGPL 1092 (1383)
Q Consensus 1087 ~~~g~~ 1092 (1383)
++.|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14266 224 IESGLT 229 (250)
T ss_pred EEeCCH
Confidence 998875
No 463
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.8e-32 Score=349.32 Aligned_cols=213 Identities=27% Similarity=0.422 Sum_probs=175.7
Q ss_pred CcEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCc
Q 000628 852 PLSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGY 931 (1383)
Q Consensus 852 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~ 931 (1383)
...++++|++|.++. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.
T Consensus 453 ~~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~ 519 (694)
T TIGR01846 453 RGAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGV 519 (694)
T ss_pred CCeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCE
Confidence 346899999987641 124599999999999999999999999999999999997653 4799999998
Q ss_pred cCC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccC
Q 000628 932 PKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGL 1001 (1383)
Q Consensus 932 ~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~ 1001 (1383)
++. ...+++.++||+|++.+++ .|++||+.+.. .+.+. +.+.++++..++.+. .|+.++.
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~t~i~~ 589 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAPF----EHVIHAAKLAGAHDFISELPQGYNTEVGE 589 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCCH----HHHHHHHHHcChHHHHHhCcCccCcEecC
Confidence 764 3457788999999988876 59999997642 12222 235666777666543 3555554
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1002 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1002 ~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
. ..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++. +++|+|++||+++ ....+|++++|+
T Consensus 590 ~-g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~ 665 (694)
T TIGR01846 590 K-GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLE 665 (694)
T ss_pred C-CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEe
Confidence 4 45799999999999999999999999999999999999999999999985 5899999999975 456799999998
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|+.
T Consensus 666 ~-G~i~~~g~~ 675 (694)
T TIGR01846 666 K-GQIAESGRH 675 (694)
T ss_pred C-CEEEEeCCH
Confidence 5 899999984
No 464
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.8e-34 Score=318.07 Aligned_cols=195 Identities=26% Similarity=0.351 Sum_probs=156.3
Q ss_pred eEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC---hhcccceEEEEccCCCCCCCCCH
Q 000628 881 QLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN---QETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 881 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ....++.++|++|++.+++ .||
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 59999999999999999999999999999999999865 34799999997653 2334567999999988876 699
Q ss_pred HHHHHHHHHhhcCCCCcHHHHH-----HHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000628 958 YESLLYSAWLRLSSDVDTKKRK-----MFVDEVMELV--ELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1383)
+||+.+.... ....... ..+++.++.+ ++.+..+.. +..||||||||++||++|+.+|++|+|
T Consensus 93 ~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999875321 1111111 1234455554 444444433 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
||||+|||+.++..+.+.|+++. +|.|||++||+++ ++ ..||++++|.+ |++++.|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-CeEeeeCCH
Confidence 99999999999999999999986 4899999999975 34 45999999985 788888764
No 465
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-33 Score=317.38 Aligned_cols=206 Identities=18% Similarity=0.284 Sum_probs=161.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CceeEEEECCeeCCCC-----CCcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 256 (1383)
..+|+|+|++|++|++++|+|||||||||||++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 358999999999999999999999999999999999986310 1389999999986421 123569999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc----cccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1383)
++ .||+||+.+.+...+... +. ...++.+++.+++. +..+
T Consensus 106 ~~-~tv~enl~~~~~~~~~~~---------------------~~--------------~~~~~~~l~~~~l~~~l~~~~~ 149 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYTG---------------------DM--------------DELVERSLRKAAVWDECKDKLN 149 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCcH---------------------HH--------------HHHHHHHHHHhCCcchhhhhhC
Confidence 87 599999988654321100 00 01123455666653 3345
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
+.+.+ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|+ ..++.++||
T Consensus 150 ~~~~~-----LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiiivtH~-~~~~~~~~d 221 (269)
T PRK14259 150 ESGYS-----LSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--NFTIVIVTHN-MQQAVRVSD 221 (269)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEeCC-HHHHHHhcC
Confidence 55544 999999999999999999999999999999999999999999999854 5666666554 558889999
Q ss_pred eEEEEcC-----------CeEEEecChhHHHH
Q 000628 413 DIILLSE-----------GQIVYQGPRDNVLE 433 (1383)
Q Consensus 413 ~i~lL~~-----------G~iv~~G~~~~~~~ 433 (1383)
++++|++ |++++.|+++++.+
T Consensus 222 ~i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 222 MTAFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EEEEEeccccccccccccceEEEeCCHHHHHh
Confidence 9999996 67899999988753
No 466
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-33 Score=315.18 Aligned_cols=215 Identities=23% Similarity=0.332 Sum_probs=172.8
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCC--Cce--EEEEEEEcC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GGY--IEGDIKISG 930 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~g~--~~G~i~i~g 930 (1383)
+.++|+++.+ +++.+|+||||++++||+++|+|+||||||||+++|+|... .|. +.|++.++|
T Consensus 11 i~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g 77 (257)
T PRK14246 11 FNISRLYLYI-------------NDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFG 77 (257)
T ss_pred eeeeeEEEec-------------CCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECC
Confidence 6777777644 24569999999999999999999999999999999999654 232 236666666
Q ss_pred ccCC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----cccccccCCC
Q 000628 931 YPKN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSMVGLPG 1003 (1383)
Q Consensus 931 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~~g~~~ 1003 (1383)
.+.. ....++.++|++|++.+++.+|++||+.+...... ....++..+.++++++.+++.+ ..+..
T Consensus 78 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----- 150 (257)
T PRK14246 78 KDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP----- 150 (257)
T ss_pred cccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC-----
Confidence 6542 22346779999999999999999999988643221 1122344456889999999864 23333
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecC
Q 000628 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1383)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1083 (1383)
+..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.||++++|.+
T Consensus 151 ~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~- 227 (257)
T PRK14246 151 ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN- 227 (257)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999999864 699999999975 46678999999985
Q ss_pred cEEEEecCC
Q 000628 1084 GRVIYAGPL 1092 (1383)
Q Consensus 1084 G~~~~~g~~ 1092 (1383)
|+++..|+.
T Consensus 228 g~i~~~g~~ 236 (257)
T PRK14246 228 GELVEWGSS 236 (257)
T ss_pred CEEEEECCH
Confidence 899888875
No 467
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-33 Score=307.99 Aligned_cols=192 Identities=29% Similarity=0.423 Sum_probs=160.7
Q ss_pred eeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC-------CcceEEEecCCCCCCCCCC
Q 000628 189 DVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV-------PQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~~~~~~~lT 261 (1383)
|+|+++++ ++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999987 999999998864311 2457999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
|+||+.+...... ... ....++.+++.+||++..++.+++
T Consensus 92 ~~~~l~~~~~~~~------------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (214)
T cd03297 92 VRENLAFGLKRKR------------NRE------------------------DRISVDELLDLLGLDHLLNRYPAQ---- 131 (214)
T ss_pred HHHHHHHHHhhCC------------HHH------------------------HHHHHHHHHHHcCCHhHhhcCccc----
Confidence 9999987532100 000 011245678899998777777766
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+ ..++.+++|++++|++|+
T Consensus 132 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~-~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 132 -LSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHD-LSEAEYLADRIVVMEDGR 209 (214)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecC-HHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999976546677776655 457788999999999999
Q ss_pred EEEec
Q 000628 422 IVYQG 426 (1383)
Q Consensus 422 iv~~G 426 (1383)
++.+|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98765
No 468
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-32 Score=313.55 Aligned_cols=207 Identities=18% Similarity=0.292 Sum_probs=161.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCCC-----CcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEFV-----PQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~~~~ 256 (1383)
..+|+|+|+++++|++++|+||||||||||+++|+|.++ +....+|+|.++|+++.... .++.++|++|++.+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 113 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNP 113 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCcc
Confidence 358999999999999999999999999999999999864 10013899999999875321 24579999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc----cccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1383)
++. ||+||+.+.....+... .... ...+...++.+++. +..+
T Consensus 114 ~~~-tv~enl~~~~~~~~~~~-------------------~~~~--------------~~~~~~~l~~~~l~~~~~~~~~ 159 (268)
T PRK14248 114 FPK-SIYNNITHALKYAGERR-------------------KSVL--------------DEIVEESLTKAALWDEVKDRLH 159 (268)
T ss_pred Ccc-cHHHHHHHHHHhcCCCc-------------------HHHH--------------HHHHHHHHHHcCCCcchHHHHh
Confidence 875 99999987532211000 0000 01133456666664 2344
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
+.+++ ||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 160 ~~~~~-----LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~~-~~~~~~~d 231 (268)
T PRK14248 160 SSALS-----LSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--EYSIIIVTHNM-QQALRVSD 231 (268)
T ss_pred cCccc-----CCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--CCEEEEEEeCH-HHHHHhCC
Confidence 55554 999999999999999999999999999999999999999999999864 46777766654 57889999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000628 413 DIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 413 ~i~lL~~G~iv~~G~~~~~~ 432 (1383)
+|++|++|++++.|+.+++.
T Consensus 232 ~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 232 RTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 469
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=7.6e-33 Score=315.24 Aligned_cols=207 Identities=23% Similarity=0.357 Sum_probs=167.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCee-----CCCCCC-------cceEEEec
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHE-----LNEFVP-------QRTCAYIS 251 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~-----~~~~~~-------~~~~~yv~ 251 (1383)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 35999999999999999999999999999999999999987 9999999987 554321 34699999
Q ss_pred CCCC--CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc
Q 000628 252 QHDL--HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI 329 (1383)
Q Consensus 252 Q~~~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 329 (1383)
|++. +++.+|+.||+.+.....+.. ..++ ....++.+++.+|+.+
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~~-------------------~~~~--------------~~~~~~~~l~~~~l~~ 142 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGAR-------------------HYGD--------------IRATAGDWLERVEIDA 142 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhccC-------------------cHHH--------------HHHHHHHHHHHcCCCh
Confidence 9973 567789999997632110000 0000 0112456788899974
Q ss_pred -cccccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHH
Q 000628 330 -CADTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETY 408 (1383)
Q Consensus 330 -~~dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~ 408 (1383)
..++.+++ |||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.+..+.|+|++.|+ ..++.
T Consensus 143 ~~~~~~~~~-----LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~-~~~~~ 216 (258)
T PRK11701 143 ARIDDLPTT-----FSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHD-LAVAR 216 (258)
T ss_pred hHHhCCCcc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCC-HHHHH
Confidence 56777765 999999999999999999999999999999999999999999999876546677666655 45777
Q ss_pred hhcCeEEEEcCCeEEEecChhHHH
Q 000628 409 DLFDDIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 409 ~~~D~i~lL~~G~iv~~G~~~~~~ 432 (1383)
+.+|+|++|++|++++.|+++++.
T Consensus 217 ~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 217 LLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHh
Confidence 899999999999999999988764
No 470
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-33 Score=314.22 Aligned_cols=206 Identities=19% Similarity=0.262 Sum_probs=164.2
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc---CCCCCceeEEEECCeeCCCCC-----CcceEEEecCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL---GKDLRASGKITYCGHELNEFV-----PQRTCAYISQHDL 255 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~---~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~~~ 255 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.. ++. ..+|+|.++|+++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 45999999999999999999999999999999999973 331 13899999999875421 2457999999998
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccc----c
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDIC----A 331 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~----~ 331 (1383)
+++ .||+||+.++.+..+.... .. ....++.+++.+||.+. .
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~~-------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKDN-------------------AF--------------IRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCcH-------------------HH--------------HHHHHHHHHHHcCCCcchhhhh
Confidence 887 6999999876432211000 00 01124567888888643 3
Q ss_pred cccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhc
Q 000628 332 DTMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLF 411 (1383)
Q Consensus 332 dt~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~ 411 (1383)
+..++ .|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++
T Consensus 141 ~~~~~-----~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivtH~~-~~~~~~~ 212 (250)
T PRK14245 141 KESAF-----ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--DYTIVIVTHNM-QQAARVS 212 (250)
T ss_pred hCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHhhC
Confidence 44444 4999999999999999999999999999999999999999999999853 56777766554 4788999
Q ss_pred CeEEEEcCCeEEEecChhHHH
Q 000628 412 DDIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 412 D~i~lL~~G~iv~~G~~~~~~ 432 (1383)
|+|++|++|++++.|+++++.
T Consensus 213 d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 213 DKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred CEEEEEECCEEEEECCHHHHh
Confidence 999999999999999998874
No 471
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.9e-33 Score=312.76 Aligned_cols=195 Identities=26% Similarity=0.415 Sum_probs=158.8
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVT 956 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 956 (1383)
+.+|+|+|+++++|++++|+||||||||||+++|+|... +..|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 93 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-GT 93 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-ch
Confidence 459999999999999999999999999999999999755 347999999986532 234567999999998776 69
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccccccccc------CCCCCCCCHHHHHHHHHHHHHhhCCCCcee
Q 000628 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVG------LPGVSGLSTEQRKRLTIAVELVANPSIIFM 1030 (1383)
Q Consensus 957 v~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g------~~~~~~LSgGqrqRl~ia~aL~~~p~illL 1030 (1383)
|.||+.+... ... .+.+.++++.+++.+..+.... ...+..||||||||++||++|+.+|++|+|
T Consensus 94 v~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llll 164 (220)
T cd03245 94 LRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLL 164 (220)
T ss_pred HHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999976421 111 1235678888888776655321 112458999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEec
Q 000628 1031 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAG 1090 (1383)
Q Consensus 1031 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1090 (1383)
||||+|||+.++..+++.|++++++ +|||++||+++ ..+.+|++++|.+ |++++.|
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~--~~~~~d~v~~l~~-g~i~~~~ 220 (220)
T cd03245 165 DEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS--LLDLVDRIIVMDS-GRIVADG 220 (220)
T ss_pred eCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH--HHHhCCEEEEEeC-CeEeecC
Confidence 9999999999999999999998764 89999999975 3478999999985 7777653
No 472
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.2e-33 Score=318.25 Aligned_cols=196 Identities=29% Similarity=0.417 Sum_probs=153.6
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ---ETFARVSGYCEQNDIHSPYVT 956 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 956 (1383)
+.+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 459999999999999999999999999999999999765 347999999976532 233567999999988776 69
Q ss_pred HHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccc-------cccCCCCCCCCHHHHHHHHHHHHHhhCCCCce
Q 000628 957 VYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDS-------MVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1029 (1383)
Q Consensus 957 v~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~~g~~~~~~LSgGqrqRl~ia~aL~~~p~ill 1029 (1383)
|+||+.+....+ ..+. +++.++..++.+..+. ... ..+..|||||||||+||++|+.+|++|+
T Consensus 93 v~e~l~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPDA-----TDEE----VEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCCC-----CHHH----HHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999997743211 1111 2233333333222111 111 1246899999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCC
Q 000628 1030 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1030 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1092 (1383)
|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.||++++|.+ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999987 7999999999975 34 58999999985 789988874
No 473
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.1e-33 Score=305.61 Aligned_cols=182 Identities=24% Similarity=0.312 Sum_probs=153.2
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ--ETFARVSGYCEQNDIHSPYVTV 957 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 957 (1383)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++.+++.+||
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (198)
T TIGR01189 13 RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELSA 90 (198)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccCCcH
Confidence 569999999999999999999999999999999999765 347999999986532 2345679999999888888999
Q ss_pred HHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCC
Q 000628 958 YESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1037 (1383)
Q Consensus 958 ~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgL 1037 (1383)
.||+.+....+. . + ++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 91 ~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 158 (198)
T TIGR01189 91 LENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTTAL 158 (198)
T ss_pred HHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 999987643321 1 1 235788999999987776653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEE
Q 000628 1038 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL 1078 (1383)
Q Consensus 1038 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~ 1078 (1383)
|+.++..+++.|++++++|.|||++||++. + ..+++++
T Consensus 159 D~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~--~~~~~~~ 196 (198)
T TIGR01189 159 DKAGVALLAGLLRAHLARGGIVLLTTHQDL-G--LVEAREL 196 (198)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEEcccc-c--ccceEEe
Confidence 999999999999998878999999999874 2 2345554
No 474
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=8.3e-33 Score=313.35 Aligned_cols=219 Identities=26% Similarity=0.308 Sum_probs=168.1
Q ss_pred EEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000628 855 LTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKN 934 (1383)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~ 934 (1383)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 45677765442 24699999999999999999999999999999999997311135799999998753
Q ss_pred h---hc-ccceEEEEccCCCCCCCCCHHHHHHHHHH-hhc--C-CCCcHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000628 935 Q---ET-FARVSGYCEQNDIHSPYVTVYESLLYSAW-LRL--S-SDVDTKKRKMFVDEVMELVELK-SLNDSMVGLPGVS 1005 (1383)
Q Consensus 935 ~---~~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~-l~~--~-~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~g~~~~~ 1005 (1383)
. .. .++.++|++|++.+++.+|+.+++.+... ++. . .........+.++++++.+++. +..+..+ ..
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 2 11 23469999999988888887776543211 110 0 0111223345678899999984 3444432 12
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-hceEEEEecCc
Q 000628 1006 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLLKRGG 1084 (1383)
Q Consensus 1006 ~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~d~~~~l~~gG 1084 (1383)
.|||||||||+|||+|+.+|+||+|||||+|||+.++..+.+.|+++++.|+|||++||+++ .+... +|++++|. +|
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~-~g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLY-QG 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEE-CC
Confidence 69999999999999999999999999999999999999999999999877899999999975 34444 79999997 58
Q ss_pred EEEEecCC
Q 000628 1085 RVIYAGPL 1092 (1383)
Q Consensus 1085 ~~~~~g~~ 1092 (1383)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 89998875
No 475
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-33 Score=331.16 Aligned_cols=193 Identities=21% Similarity=0.299 Sum_probs=161.7
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYE 959 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 959 (1383)
+.+|+||||+|++|+++||+|||||||||||++|+|... +.+|+|.++|.+. ++.+...+.+.+|++|
T Consensus 37 ~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~--P~sGeI~I~G~~~----------~i~~~~~l~~~lTV~E 104 (549)
T PRK13545 37 HYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTM--PNKGTVDIKGSAA----------LIAISSGLNGQLTGIE 104 (549)
T ss_pred ceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCceEEEECCEee----------eEEeccccCCCCcHHH
Confidence 469999999999999999999999999999999999765 3479999998641 1223345567799999
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCH
Q 000628 960 SLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1039 (1383)
Q Consensus 960 ~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~ 1039 (1383)
++.+..... ....++..+.++++++.++|.+..+.. +..||||||||++|||||+.+|++|||||||+|||+
T Consensus 105 nL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~-----~~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~ 176 (549)
T PRK13545 105 NIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQP-----VKTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQ 176 (549)
T ss_pred HHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCH
Confidence 998754332 122344455678899999998877776 457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecCCCc
Q 000628 1040 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGH 1094 (1383)
Q Consensus 1040 ~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1094 (1383)
.++..+++.|++++++|+|||++||+++ ++.+.||++++|.+ |++++.|+..+
T Consensus 177 ~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~e 229 (549)
T PRK13545 177 TFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIKE 229 (549)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHHH
Confidence 9999999999999877999999999976 56678999999985 89999988643
No 476
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=313.39 Aligned_cols=206 Identities=21% Similarity=0.301 Sum_probs=162.9
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CCcceEEEecCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 257 (1383)
.+|+|+|+++++||+++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 58999999999999999999999999999999999853 4222389999999987431 1246799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc----cccc
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CADT 333 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 333 (1383)
+ +||+||+.+.....+... ... ....++.+++.+|+.. ..+.
T Consensus 99 ~-~tv~enl~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 144 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKD-------------------KQV--------------LDEAVEKSLKGASIWDEVKDRLHD 144 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCc-------------------HHH--------------HHHHHHHHHHHcCCchhHHHHHhc
Confidence 7 899999988643221100 000 0112345667777642 2344
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|+ ..++.+.+|+
T Consensus 145 ~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~-~~~~~~~~d~ 216 (252)
T PRK14239 145 SALG-----LSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--DYTMLLVTRS-MQQASRISDR 216 (252)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--CCeEEEEECC-HHHHHHhCCE
Confidence 4444 999999999999999999999999999999999999999999999864 4676666655 4578899999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
|++|++|++++.|+.+++.
T Consensus 217 i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 217 TGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999998874
No 477
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=9.2e-33 Score=349.15 Aligned_cols=207 Identities=23% Similarity=0.356 Sum_probs=168.4
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~lT 261 (1383)
++|+|+|+++++|+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+++ .|
T Consensus 349 ~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~-~t 424 (585)
T TIGR01192 349 QGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPT---VGQILIDGIDINTVTRESLRKSIATVFQDAGLFN-RS 424 (585)
T ss_pred ccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCC---CCEEEECCEEhhhCCHHHHHhheEEEccCCccCc-cc
Confidence 4899999999999999999999999999999999999997 9999999998876543 468999999998886 69
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
++|||.++... .+.++..+++...+. .+. ...+++..||.+|+ .+.
T Consensus 425 i~~Ni~~~~~~-------------------------~~~~~~~~a~~~~~~-----~~~---i~~l~~g~~t~~~~-~~~ 470 (585)
T TIGR01192 425 IRENIRLGREG-------------------------ATDEEVYEAAKAAAA-----HDF---ILKRSNGYDTLVGE-RGN 470 (585)
T ss_pred HHHHHhcCCCC-------------------------CCHHHHHHHHHHhCc-----HHH---HHhccccccchhcC-CCC
Confidence 99999875210 001111122111110 111 12366778899986 366
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|++.|++ +..+.+|+|++|++|+
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~--~~tvI~isH~~--~~~~~~d~i~~l~~G~ 546 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRK--NRTTFIIAHRL--STVRNADLVLFLDQGR 546 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhC--CCEEEEEEcCh--HHHHcCCEEEEEECCE
Confidence 7999999999999999999999999999999999999999999998743 68888888776 4557799999999999
Q ss_pred EEEecChhHHHH
Q 000628 422 IVYQGPRDNVLE 433 (1383)
Q Consensus 422 iv~~G~~~~~~~ 433 (1383)
++..|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (585)
T TIGR01192 547 LIEKGSFQELIQ 558 (585)
T ss_pred EEEECCHHHHHH
Confidence 999999998864
No 478
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=8.9e-33 Score=300.64 Aligned_cols=171 Identities=40% Similarity=0.725 Sum_probs=151.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCc--CCCCCceeEEEECCeeCCCCCCcceEEEecCCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKL--GKDLRASGKITYCGHELNEFVPQRTCAYISQHDLHHGEMT 261 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lT 261 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|. +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 46999999999999999999999999999999999999 876 8999999998765334567999999999999999
Q ss_pred HHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCcccC
Q 000628 262 VRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMRR 341 (1383)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 341 (1383)
++||+.+..+ +.
T Consensus 99 ~~~~i~~~~~-----------------------------------------------------~~--------------- 110 (194)
T cd03213 99 VRETLMFAAK-----------------------------------------------------LR--------------- 110 (194)
T ss_pred HHHHHHHHHH-----------------------------------------------------hc---------------
Confidence 9999976310 00
Q ss_pred CCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCCe
Q 000628 342 GISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEGQ 421 (1383)
Q Consensus 342 GLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G~ 421 (1383)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +.|+|++.|++..+..+.+|++++|++|+
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~-~~tiii~sh~~~~~~~~~~d~v~~l~~G~ 189 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADT-GRTIICSIHQPSSEIFELFDKLLLLSQGR 189 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCchHHHHHhcCEEEEEeCCE
Confidence 39999999999999999999999999999999999999999999998653 78888888877667888999999999999
Q ss_pred EEEec
Q 000628 422 IVYQG 426 (1383)
Q Consensus 422 iv~~G 426 (1383)
+++.|
T Consensus 190 i~~~~ 194 (194)
T cd03213 190 VIYFG 194 (194)
T ss_pred EEecC
Confidence 98765
No 479
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.5e-32 Score=305.33 Aligned_cols=196 Identities=26% Similarity=0.395 Sum_probs=164.8
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC------CcceEEEecCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV------PQRTCAYISQHDLHH 257 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 257 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 56999999999999999999999999999999999999887 999999999875432 235799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccC
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGD 337 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 337 (1383)
+.+|+.||+.++...... ... .+ ....++.+++.+||++..++.+.+
T Consensus 95 ~~~t~~~n~~~~~~~~~~---------~~~----------~~--------------~~~~~~~~l~~~~l~~~~~~~~~~ 141 (220)
T TIGR02982 95 GFLTARQNVQMALELQPN---------LSY----------QE--------------ARERARAMLEAVGLGDHLDYYPHN 141 (220)
T ss_pred CCCCHHHHHHHHHHhccC---------CCH----------HH--------------HHHHHHHHHHHcCChhhhhcChhh
Confidence 989999999886432110 000 00 011356688899998877777765
Q ss_pred cccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEE
Q 000628 338 EMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILL 417 (1383)
Q Consensus 338 ~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL 417 (1383)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++. ..+++|+|++|
T Consensus 142 -----lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l 214 (220)
T TIGR02982 142 -----LSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHM 214 (220)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEE
Confidence 99999999999999999999999999999999999999999999987655788888887763 56899999999
Q ss_pred cCCeE
Q 000628 418 SEGQI 422 (1383)
Q Consensus 418 ~~G~i 422 (1383)
++|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
No 480
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=314.82 Aligned_cols=216 Identities=22% Similarity=0.279 Sum_probs=173.1
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC--c-eEEEEEEEc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YIEGDIKIS 929 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--g-~~~G~i~i~ 929 (1383)
..+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 3578888887552 24699999999999999999999999999999999997542 1 258999999
Q ss_pred CccCC-------hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcc----ccccc
Q 000628 930 GYPKN-------QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKS----LNDSM 998 (1383)
Q Consensus 930 g~~~~-------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~ 998 (1383)
|.+.. ...+++.++|++|++.+++. ||+||+.+...... . ......++.++++++.+++.+ ..+..
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~-~-~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 158 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG-V-KRRSILEERVENALRNAALWDEVKDRLGDL 158 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC-C-ChHHHHHHHHHHHHHHcCCchhhhHHHhCC
Confidence 87542 12345679999999988886 99999987643221 1 111223456788888888742 22333
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEE
Q 000628 999 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL 1078 (1383)
Q Consensus 999 ~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~ 1078 (1383)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|+++
T Consensus 159 -----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~ 231 (265)
T PRK14252 159 -----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTA 231 (265)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEE
Confidence 457999999999999999999999999999999999999999999999875 699999999975 5667899999
Q ss_pred EEecCcEEEEecCC
Q 000628 1079 LLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1079 ~l~~gG~~~~~g~~ 1092 (1383)
+|.+ |++++.|+.
T Consensus 232 ~l~~-G~i~~~g~~ 244 (265)
T PRK14252 232 YMYM-GELIEFGAT 244 (265)
T ss_pred EEEC-CEEEEeCCH
Confidence 9974 899988874
No 481
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=358.44 Aligned_cols=213 Identities=23% Similarity=0.344 Sum_probs=177.1
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++++|++|.++. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 46999999987641 124699999999999999999999999999999999997663 47999999987
Q ss_pred CC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000628 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-------NDSMVGLP 1002 (1383)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~~g~~ 1002 (1383)
.+ ...+++.++||+|++.+++ -|++||+.++. +.+.+ ++.++++++.+++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 64 3456788999999999886 59999998742 11122 2346777777776543 35666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
| +.||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|++||+++ ..+.||++++|++
T Consensus 478 g-~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 G-VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred C-CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 3 5799999999999999999999999999999999999999999999975 4799999999974 6788999999985
Q ss_pred CcEEEEecCC
Q 000628 1083 GGRVIYAGPL 1092 (1383)
Q Consensus 1083 gG~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 899999984
No 482
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.9e-33 Score=357.57 Aligned_cols=210 Identities=24% Similarity=0.360 Sum_probs=177.4
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++++|++|.++. ++.+|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 46899999987741 13599999999999999999999999999999999998663 47999999987
Q ss_pred CC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000628 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN-------DSMVGLP 1002 (1383)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~~g~~ 1002 (1383)
++ ...+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+|+.+.. |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 64 35678899999999999886 9999998752 122 23477888888876533 4555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
..+||||||||++|||||+++|+||+||||||+||+.+++.|.+.|+++.+ ++|+|++||+++ ....+|++++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999864 799999999974 5678999999975
Q ss_pred CcEEEEecCC
Q 000628 1083 GGRVIYAGPL 1092 (1383)
Q Consensus 1083 gG~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 899999985
No 483
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-33 Score=314.61 Aligned_cols=211 Identities=25% Similarity=0.390 Sum_probs=163.3
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|+++.++ +.+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeH
Confidence 356777776542 12359999999999999999999999999999999999765 3479999999765
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccc-c-----CCCC
Q 000628 934 NQ---ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMV-G-----LPGV 1004 (1383)
Q Consensus 934 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-g-----~~~~ 1004 (1383)
.. ..+++.++|++|++.+++. ||+||+.+... .... ..+++.++.+++.+..+... | ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NATD----EEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 3356679999999887775 99999976421 1111 12344455554443322211 0 1124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCc
Q 000628 1005 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGG 1084 (1383)
Q Consensus 1005 ~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG 1084 (1383)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.+|++++|.+ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 6899999999999999999999999999999999999999999999986 5899999999975 34 56999999985 7
Q ss_pred EEEEecCC
Q 000628 1085 RVIYAGPL 1092 (1383)
Q Consensus 1085 ~~~~~g~~ 1092 (1383)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88887764
No 484
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=8.1e-33 Score=308.50 Aligned_cols=191 Identities=24% Similarity=0.295 Sum_probs=156.5
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEc--Cc--cCCh---hc---c-cceEEEEccC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKIS--GY--PKNQ---ET---F-ARVSGYCEQN 948 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~--g~--~~~~---~~---~-~~~~gyv~Q~ 948 (1383)
+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ ..|+|.++ |. +... .. . ++.++|++|+
T Consensus 21 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 98 (224)
T TIGR02324 21 LPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAWVDLAQASPREVLEVRRKTIGYVSQF 98 (224)
T ss_pred eEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCccchhhcCHHHHHHHHhcceEEEecc
Confidence 4699999999999999999999999999999999997653 47999998 42 3211 11 1 3469999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 000628 949 DIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSL-NDSMVGLPGVSGLSTEQRKRLTIAVELVANPSI 1027 (1383)
Q Consensus 949 ~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~i 1027 (1383)
+.+++.+||+|++.+..... ........+.+.++++.+++.+. .+.. +..||||||||++||++|+.+|++
T Consensus 99 ~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~laral~~~p~l 170 (224)
T TIGR02324 99 LRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP-----PATFSGGEQQRVNIARGFIADYPI 170 (224)
T ss_pred cccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999998764322 12233344567889999999753 3444 457999999999999999999999
Q ss_pred ceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1028 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1028 llLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+...+|+++.+.
T Consensus 171 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 171 LLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 9999999999999999999999999877999999999954 3556899988763
No 485
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.7e-33 Score=355.42 Aligned_cols=212 Identities=26% Similarity=0.415 Sum_probs=177.6
Q ss_pred cEEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000628 853 LSLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 932 (1383)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~ 932 (1383)
..++|+|+++.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46899999987631 12359999999999999999999999999999999999765 347999999987
Q ss_pred CC---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc------cccccCCC
Q 000628 933 KN---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLN------DSMVGLPG 1003 (1383)
Q Consensus 933 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~------~~~~g~~~ 1003 (1383)
.. ...+++.++||+|++.+++ -|++||+.++. .+. .++.++++++.+++.+.. |+.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~-----~~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA-----PNA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC-----Ccc----CHHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 64 3456788999999998876 59999998753 122 233478889999987653 4445543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecC
Q 000628 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1383)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1083 (1383)
...||||||||++|||+|+++|++|+||||||+||+.+++.+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-
Confidence 45799999999999999999999999999999999999999999999986 5899999999985 4567999999985
Q ss_pred cEEEEecCC
Q 000628 1084 GRVIYAGPL 1092 (1383)
Q Consensus 1084 G~~~~~g~~ 1092 (1383)
|++++.|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 899999974
No 486
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-33 Score=316.02 Aligned_cols=213 Identities=27% Similarity=0.358 Sum_probs=170.5
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC-----CCceeEEEECCeeCCCCCC---cceEEEecCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD-----LRASGKITYCGHELNEFVP---QRTCAYISQHDL 255 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~ 255 (1383)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 36999999999999999999999999999999999999874 1127999999998764322 346899999987
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMV 335 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 335 (1383)
.++.+||+||+.++....... .+... .+ ....++.+++.+||++..++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~~---------------~~~~~-~~--------------~~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHARR---------------AGALT-HR--------------DGEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhcccccccc---------------cccCC-HH--------------HHHHHHHHHHHcCcHhhhcCCc
Confidence 666799999998753110000 00000 00 0113466888999987777777
Q ss_pred cCcccCCCChHHHHHHHHHHHHh---------cCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcch
Q 000628 336 GDEMRRGISGGQKKRVTTGEMLV---------GTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPE 406 (1383)
Q Consensus 336 g~~~~rGLSGGqkqRvsia~al~---------~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~ 406 (1383)
++ |||||||||+||+||+ .+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .+
T Consensus 144 ~~-----LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~-~~ 217 (272)
T PRK13547 144 TT-----LSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDP-NL 217 (272)
T ss_pred cc-----CCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH-HH
Confidence 66 9999999999999999 599999999999999999999999999998765467777776654 47
Q ss_pred HHhhcCeEEEEcCCeEEEecChhHHH
Q 000628 407 TYDLFDDIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 407 ~~~~~D~i~lL~~G~iv~~G~~~~~~ 432 (1383)
+.+++|++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 78899999999999999999988763
No 487
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=312.76 Aligned_cols=212 Identities=17% Similarity=0.284 Sum_probs=164.7
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCCC-----CcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEFV-----PQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~~~~ 256 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|..+ |....+|+|.++|.++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999976 21123899999998875321 24679999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCccccccccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVG 336 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 336 (1383)
++. ||+||+.+.....+..... .+ ....++.+++.+||.+...+.+.
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~------------------~~--------------~~~~~~~~l~~~~l~~~~~~~~~ 144 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNK------------------KK--------------LDEIVEKSLTSVGLWEELGDRLK 144 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCH------------------HH--------------HHHHHHHHHHHcCCCchhhhHhh
Confidence 875 9999998753222110000 00 01124567888888653211111
Q ss_pred CcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEE
Q 000628 337 DEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIIL 416 (1383)
Q Consensus 337 ~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~l 416 (1383)
...+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|+|++
T Consensus 145 -~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiiisH~~-~~~~~~~d~i~~ 220 (251)
T PRK14244 145 -DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK--NFTIIVVTHSM-KQAKKVSDRVAF 220 (251)
T ss_pred -cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHhhcCEEEE
Confidence 12344999999999999999999999999999999999999999999999853 67777776655 477889999999
Q ss_pred EcCCeEEEecChhHHH
Q 000628 417 LSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 417 L~~G~iv~~G~~~~~~ 432 (1383)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 488
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-33 Score=299.36 Aligned_cols=158 Identities=30% Similarity=0.418 Sum_probs=141.3
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh-----hcccceEEEEccCCCCCCC
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ-----ETFARVSGYCEQNDIHSPY 954 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~ 954 (1383)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 13 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (178)
T cd03229 13 KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFPH 90 (178)
T ss_pred eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccCCC
Confidence 469999999999999999999999999999999999765 347999999987532 2356789999999988888
Q ss_pred CCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCC
Q 000628 955 VTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1034 (1383)
Q Consensus 955 lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPT 1034 (1383)
.|++|++.+. ||||||||++||++|+.+|++++|||||
T Consensus 91 ~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDEP~ 128 (178)
T cd03229 91 LTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDEPT 128 (178)
T ss_pred CCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 9999987542 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhhceEEEEec
Q 000628 1035 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLLKR 1082 (1383)
Q Consensus 1035 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~d~~~~l~~ 1082 (1383)
+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++
T Consensus 129 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~ 176 (178)
T cd03229 129 SALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRD 176 (178)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC
Confidence 999999999999999999877 899999999975 46668999999975
No 489
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=9.6e-33 Score=350.49 Aligned_cols=208 Identities=24% Similarity=0.377 Sum_probs=169.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC---cceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP---QRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~~~~~~~l 260 (1383)
+.+|+|+|++++|||.++|+||||||||||+++|+|.++|. +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 353 ~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~-~ 428 (576)
T TIGR02204 353 QPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ---SGRILLDGVDLRQLDPAELRARMALVPQDPVLFA-A 428 (576)
T ss_pred CccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHHhceEEccCCcccc-c
Confidence 46999999999999999999999999999999999999997 8999999999876654 467999999999885 5
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcccccccccCccc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDICADTMVGDEMR 340 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 340 (1383)
|++|||.++... .+.++..+++...+. ...++ .+++..||.+|+. +
T Consensus 429 Ti~~Ni~~~~~~-------------------------~~~~~~~~~l~~~~l------~~~i~--~l~~gl~t~i~~~-g 474 (576)
T TIGR02204 429 SVMENIRYGRPD-------------------------ATDEEVEAAARAAHA------HEFIS--ALPEGYDTYLGER-G 474 (576)
T ss_pred cHHHHHhcCCCC-------------------------CCHHHHHHHHHHcCc------HHHHH--hCCCCCCceeCCC-C
Confidence 999999875210 011111122211111 11222 2566788999873 5
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEcCC
Q 000628 341 RGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLSEG 420 (1383)
Q Consensus 341 rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~~G 420 (1383)
+.||||||||++||||++++|++++||||||+||+.++..+.+.|+++.+ ++|+|+..|++ +....+|+|++|++|
T Consensus 475 ~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~--~~t~IiitH~~--~~~~~~d~vi~l~~g 550 (576)
T TIGR02204 475 VTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMK--GRTTLIIAHRL--ATVLKADRIVVMDQG 550 (576)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECC
Confidence 67999999999999999999999999999999999999999999998753 67888887776 567889999999999
Q ss_pred eEEEecChhHHHH
Q 000628 421 QIVYQGPRDNVLE 433 (1383)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1383)
+++..|+++++.+
T Consensus 551 ~~~~~g~~~~l~~ 563 (576)
T TIGR02204 551 RIVAQGTHAELIA 563 (576)
T ss_pred EEEeeecHHHHHH
Confidence 9999999988753
No 490
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.2e-34 Score=328.90 Aligned_cols=212 Identities=25% Similarity=0.369 Sum_probs=178.5
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 933 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~ 933 (1383)
.++++|++++++. +..++|+|+|+++++||.+||+|+||||||||++.|+|..+ +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~-----------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPG-----------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCC-----------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 6899999988753 23469999999999999999999999999999999999665 3489999999875
Q ss_pred C---hhcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccc-------cccCCC
Q 000628 934 N---QETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDS-------MVGLPG 1003 (1383)
Q Consensus 934 ~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~~g~~~ 1003 (1383)
. +..+++.+++++|...++. -|+++||.++. .+.+ ++.++++++.+||.+.... .+|+.
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge~- 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDAS----DEELWAALQQVGLEKLLESAPDGLNTWLGEG- 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCCC----HHHHHHHHHHcCHHHHHHhChhhhhchhccC-
Confidence 3 3446778999999877654 59999998752 2333 3447899999999876543 35543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecC
Q 000628 1004 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRG 1083 (1383)
Q Consensus 1004 ~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~g 1083 (1383)
...||||||||++|||+|++|.++++|||||.|||+.++++|++.|.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 467999999999999999999999999999999999999999999998774 999999999974 5688999999984
Q ss_pred cEEEEecCCC
Q 000628 1084 GRVIYAGPLG 1093 (1383)
Q Consensus 1084 G~~~~~g~~~ 1093 (1383)
|++++.|..+
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 8999999864
No 491
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=7.3e-33 Score=316.64 Aligned_cols=207 Identities=25% Similarity=0.329 Sum_probs=169.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCCC------cceEEEecCCC--C
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFVP------QRTCAYISQHD--L 255 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~~--~ 255 (1383)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 46999999999999999999999999999999999999887 9999999998764322 45799999997 3
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc-cccccc
Q 000628 256 HHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD-ICADTM 334 (1383)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 334 (1383)
+++..|+.|++.+...... +. +. .+....++.+++.+||+ +..++.
T Consensus 102 ~~~~~t~~~~l~~~~~~~~------------------~~--~~-------------~~~~~~~~~~l~~~gl~~~~~~~~ 148 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLL------------------SL--DK-------------AERLARASEMLRAVDLDDSVLDKR 148 (268)
T ss_pred cCCCCCHHHHHHHHHHhhc------------------cC--CH-------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 5677899999976421000 00 00 00112356688899996 466776
Q ss_pred ccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeE
Q 000628 335 VGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDI 414 (1383)
Q Consensus 335 vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i 414 (1383)
+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++
T Consensus 149 ~~~-----LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~-~~i~~~~d~i 222 (268)
T PRK10419 149 PPQ-----LSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDL-RLVERFCQRV 222 (268)
T ss_pred Ccc-----CChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCH-HHHHHhCCEE
Confidence 665 9999999999999999999999999999999999999999999998765567777776654 5777899999
Q ss_pred EEEcCCeEEEecChhHHH
Q 000628 415 ILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1383)
++|++|++++.|+.+++.
T Consensus 223 ~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 223 MVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEECCEEeeeCChhhcc
Confidence 999999999999988764
No 492
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=311.06 Aligned_cols=206 Identities=20% Similarity=0.339 Sum_probs=163.1
Q ss_pred eeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCC--CCCceeEEEECCeeCCCC-----CCcceEEEecCCCCCC
Q 000628 185 RILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGK--DLRASGKITYCGHELNEF-----VPQRTCAYISQHDLHH 257 (1383)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 257 (1383)
++|+|+|++|++||+++|+||||||||||+++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 589999999999999999999999999999999998753 112489999999987531 1245799999998888
Q ss_pred CCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc----ccccc
Q 000628 258 GEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICADT 333 (1383)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 333 (1383)
+ +||+||+.++....+.... .+ ....++.+++.+++. +..++
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~-------------------~~--------------~~~~~~~~l~~~~l~~~l~~~~~~ 142 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK-------------------KK--------------LDEIVEKSLKGAALWDEVKDRLKK 142 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH-------------------HH--------------HHHHHHHHHHHcCCchhhHHHHhc
Confidence 7 8999999886432221000 00 011234456666664 23345
Q ss_pred cccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCe
Q 000628 334 MVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDD 413 (1383)
Q Consensus 334 ~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~ 413 (1383)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|+ ..++.+++|+
T Consensus 143 ~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~-~~~~~~~~d~ 214 (250)
T PRK14240 143 SALG-----LSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK--DYTIVIVTHN-MQQASRISDK 214 (250)
T ss_pred CCCC-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEEeC-HHHHHhhCCE
Confidence 5544 999999999999999999999999999999999999999999999853 5677776665 4578899999
Q ss_pred EEEEcCCeEEEecChhHHH
Q 000628 414 IILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 414 i~lL~~G~iv~~G~~~~~~ 432 (1383)
|++|++|+++..|+.+++.
T Consensus 215 v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 215 TAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 493
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=311.80 Aligned_cols=207 Identities=22% Similarity=0.367 Sum_probs=163.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCC--CCceeEEEECCeeCCCC-----CCcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKD--LRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 256 (1383)
.++|+|+|+++++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 35899999999999999999999999999999999998741 12389999999887532 124679999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCcc----ccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLDI----CAD 332 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 332 (1383)
++ +||+||+.+.....+... .... ...++..++.+|+.+ ..+
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~-------------------~~~~--------------~~~~~~~l~~~~l~~~~~~~~~ 141 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKS-------------------KHKL--------------DRIVEESLKKAALWDEVKSELN 141 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCc-------------------HHHH--------------HHHHHHHHHHcCCCchhHHHHh
Confidence 87 899999988643221100 0000 012345666777753 244
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
..++ .||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++ +.|++++.|++ .++.+++|
T Consensus 142 ~~~~-----~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tili~sH~~-~~~~~~~d 213 (250)
T PRK14262 142 KPGT-----RLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--NYTIVIVTHNI-GQAIRIAD 213 (250)
T ss_pred CChh-----hcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--CcEEEEEeCCH-HHHHHhCC
Confidence 4444 4999999999999999999999999999999999999999999999864 56777766654 46889999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000628 413 DIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 413 ~i~lL~~G~iv~~G~~~~~~ 432 (1383)
+|++|++|+++..|+.+++.
T Consensus 214 ~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 214 YIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred EEEEEECCEEEEecCHHHHH
Confidence 99999999999999988774
No 494
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-33 Score=328.30 Aligned_cols=218 Identities=27% Similarity=0.395 Sum_probs=185.4
Q ss_pred cccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcCccCCh----hcccceEEEEccCCCCC
Q 000628 877 EDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQ----ETFARVSGYCEQNDIHS 952 (1383)
Q Consensus 877 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~ 952 (1383)
++..++|+||||++++||++||+|.||||||||+|+|+|... +.+|+|.++|.+... +.....|+.|.|+..+.
T Consensus 18 FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 18 FGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred cCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 345689999999999999999999999999999999999765 358999999987532 33456799999999999
Q ss_pred CCCCHHHHHHHHHHhhc-CCCCcHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceee
Q 000628 953 PYVTVYESLLYSAWLRL-SSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1031 (1383)
Q Consensus 953 ~~lTv~E~l~f~~~l~~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLD 1031 (1383)
|++||.||+.++...+. ..-.+.+...+...++|+.+++....++.+ .+||+||||.|.|||||..+++||+||
T Consensus 96 p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v-----~~LsiaqrQ~VeIArAl~~~arllIlD 170 (500)
T COG1129 96 PNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLV-----GDLSIAQRQMVEIARALSFDARVLILD 170 (500)
T ss_pred CCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhh-----hhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999987765443 223456677778899999999864366664 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhceEEEEecCcEEEEecC-CCc-chhHHHHHH
Q 000628 1032 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP-LGH-ESHKLIEYF 1103 (1383)
Q Consensus 1032 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~-~~~-~~~~~~~~f 1103 (1383)
||||.|+....+.+.+.+++++++|.+||++||.++ |+++.||++.+|.+ |+.+...+ ..+ ..+++++..
T Consensus 171 EPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~~~~~~~~~~~~~lv~~M 242 (500)
T COG1129 171 EPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVGTRPTAAETSEDELVRLM 242 (500)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEeeecccccCCCHHHHHHHh
Confidence 999999999999999999999999999999999997 89999999999975 89998888 344 334455443
No 495
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-33 Score=321.43 Aligned_cols=222 Identities=23% Similarity=0.321 Sum_probs=172.5
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 930 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---g~~~G~i~i~g 930 (1383)
.+.++|+++.++ .+.+|+++|++|++||+++|+|+|||||||||++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 578888876542 24699999999999999999999999999999999997531 13579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHHHHhhcCC---------CCc-HHHHHHHHHHHHHHcCCcccc
Q 000628 931 YPKNQ-----ETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSS---------DVD-TKKRKMFVDEVMELVELKSLN 995 (1383)
Q Consensus 931 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~l~~~~---------~~~-~~~~~~~v~~~l~~l~L~~~~ 995 (1383)
.++.. ...++.++|++|++.+++ .||+||+.+....+... ... ....++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 234567999999988877 59999998864321100 011 122345688899999884321
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhhc
Q 000628 996 DSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1075 (1383)
Q Consensus 996 ~~~~g~~~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~d 1075 (1383)
..... ..+..||||||||++||++|+.+|+||||||||+|||+.++..+++.|+++++ +.|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 11111 12468999999999999999999999999999999999999999999999976 589999999976 4667899
Q ss_pred eEEEEecCcEEEEecCC
Q 000628 1076 ELLLLKRGGRVIYAGPL 1092 (1383)
Q Consensus 1076 ~~~~l~~gG~~~~~g~~ 1092 (1383)
+++++.++|++++.|+.
T Consensus 268 ~i~~~l~~G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLTGGELVEYDDT 284 (305)
T ss_pred EEEEEecCCEEEEeCCH
Confidence 97544345899999875
No 496
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-32 Score=311.06 Aligned_cols=208 Identities=23% Similarity=0.319 Sum_probs=164.1
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCC--CceeEEEECCeeCCCC-----CCcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDL--RASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 256 (1383)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 469999999999999999999999999999999999987631 1379999999987531 124579999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCC----ccccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGL----DICAD 332 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL----~~~~d 332 (1383)
++.+|+.||+.++....+... ..+. ....+..++.+++ .+..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~-------------------~~~~--------------~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRD-------------------RDHL--------------MEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCC-------------------HHHH--------------HHHHHHHHHHcCcchhhhhhhc
Confidence 999999999987543211000 0000 0112334444544 23445
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d 215 (252)
T PRK14272 144 TPATG-----LSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--VTTIIIVTHNM-HQAARVSD 215 (252)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHHhCC
Confidence 66655 999999999999999999999999999999999999999999999864 56776666554 57888999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000628 413 DIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 413 ~i~lL~~G~iv~~G~~~~~~ 432 (1383)
+|++|++|++++.|+++++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999998874
No 497
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=9.5e-33 Score=310.65 Aligned_cols=206 Identities=23% Similarity=0.392 Sum_probs=161.3
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcCCCCCceeEEEECCeeCCCCC---CcceEEEecCCCCCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLGKDLRASGKITYCGHELNEFV---PQRTCAYISQHDLHHGEM 260 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~l 260 (1383)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-R 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-c
Confidence 45899999999999999999999999999999999999887 899999998875432 2457999999987774 7
Q ss_pred CHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHc--CCcccccccccCc
Q 000628 261 TVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKIL--GLDICADTMVGDE 338 (1383)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 338 (1383)
||+||+.+... .. . .+... +.... ...+..++.+ |++...+..+++
T Consensus 91 tv~~nl~~~~~--~~-~-~~~~~---------------------~~~~~------~~~~~~l~~l~~~~~~~~~~~~~~- 138 (237)
T cd03252 91 SIRDNIALADP--GM-S-MERVI---------------------EAAKL------AGAHDFISELPEGYDTIVGEQGAG- 138 (237)
T ss_pred hHHHHhhccCC--CC-C-HHHHH---------------------HHHHH------cCcHHHHHhCcccccchhhcCCCc-
Confidence 99999987432 10 0 00000 00000 0112344444 555444555544
Q ss_pred ccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcCeEEEEc
Q 000628 339 MRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFDDIILLS 418 (1383)
Q Consensus 339 ~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D~i~lL~ 418 (1383)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++. ++ ..+|++++|+
T Consensus 139 ----LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~~-~~-~~~d~v~~l~ 210 (237)
T cd03252 139 ----LSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA--GRTVIIIAHRLS-TV-KNADRIIVME 210 (237)
T ss_pred ----CCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC--CCEEEEEeCCHH-HH-HhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999863 678888777664 45 5699999999
Q ss_pred CCeEEEecChhHHHH
Q 000628 419 EGQIVYQGPRDNVLE 433 (1383)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1383)
+|++++.|+.+++.+
T Consensus 211 ~G~i~~~~~~~~~~~ 225 (237)
T cd03252 211 KGRIVEQGSHDELLA 225 (237)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999887753
No 498
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.2e-32 Score=327.49 Aligned_cols=224 Identities=22% Similarity=0.322 Sum_probs=183.1
Q ss_pred EEEEeccceeeeccccccccccccccceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCc--eEEEEEEEcCc
Q 000628 854 SLTFDNMSYFVDMPAEMKTEGVGEDRLQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YIEGDIKISGY 931 (1383)
Q Consensus 854 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g--~~~G~i~i~g~ 931 (1383)
-++++|++..+... .+...+++||||++.+||++||+|.|||||||+.++|.|..+.+ ..+|+|.++|.
T Consensus 5 lL~V~nL~v~~~~~---------~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~ 75 (539)
T COG1123 5 LLEVENLTVEFATD---------GGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGR 75 (539)
T ss_pred eEEEeceEEEEecC---------CcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCc
Confidence 46777876554321 12357999999999999999999999999999999999965432 35799999998
Q ss_pred cCCh---h---c-ccceEEEEccCCC--CCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCC
Q 000628 932 PKNQ---E---T-FARVSGYCEQNDI--HSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLP 1002 (1383)
Q Consensus 932 ~~~~---~---~-~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~ 1002 (1383)
++.. . . ..+.++|++|++. +.|.+||.+-+.-...++.. ...++..+++.++|+.++|.+-... ..
T Consensus 76 dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~--~~~~ea~~~a~elL~~Vgl~~~~~~---~~ 150 (539)
T COG1123 76 DLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGK--GSRAEARKRAVELLEQVGLPDPERR---DR 150 (539)
T ss_pred chhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHcCCCChhhh---cc
Confidence 6422 1 1 2357999999975 66789998888765555543 2366777889999999999876554 11
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
-+..|||||||||.||+||+.+|++|++||||++||+.++.+|+++|+++.+ .|.++|++|||+.. +.+.+|++++|.
T Consensus 151 yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~V-va~~aDrv~Vm~ 229 (539)
T COG1123 151 YPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGV-VAELADRVVVMY 229 (539)
T ss_pred CCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHH-HHHhcCeEEEEE
Confidence 2578999999999999999999999999999999999999999999999974 59999999999864 778999999998
Q ss_pred cCcEEEEecCCC
Q 000628 1082 RGGRVIYAGPLG 1093 (1383)
Q Consensus 1082 ~gG~~~~~g~~~ 1093 (1383)
+ |++++.|+..
T Consensus 230 ~-G~iVE~G~~~ 240 (539)
T COG1123 230 K-GEIVETGPTE 240 (539)
T ss_pred C-CEEEEecCHH
Confidence 5 8999999864
No 499
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-33 Score=320.35 Aligned_cols=207 Identities=18% Similarity=0.319 Sum_probs=161.9
Q ss_pred ceeeeeeEEEEeCCeEEEEEcCCCCCHHHHHHHHhcCcC--CCCCceeEEEECCeeCCCC-----CCcceEEEecCCCCC
Q 000628 184 VRILKDVSGIVKPSRMTLLLGPPGAGKTTLMLALAGKLG--KDLRASGKITYCGHELNEF-----VPQRTCAYISQHDLH 256 (1383)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 256 (1383)
..+|+|+|++|++|++++|+||||||||||+++|+|..+ |....+|+|.++|.++... ..++.++|++|++.+
T Consensus 52 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 131 (286)
T PRK14275 52 FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEVLLRKKIGMVFQKPNP 131 (286)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchHHhhhcEEEECCCCCC
Confidence 359999999999999999999999999999999999854 2001289999999987532 124579999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCchhhHHHHhhHHHHhcCCCCChhHHHHHHHHHhhccchhhhHHHHHHHcCCc----cccc
Q 000628 257 HGEMTVRETLDFSGRCLGVGTRYELLAELSRREKQAGIKPDPEIDAFMKAVAVAGQETSLVTDYVLKILGLD----ICAD 332 (1383)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 332 (1383)
++. ||+||+.|.....+... ... ....++..++.+||. +..+
T Consensus 132 ~~~-tv~enl~~~~~~~~~~~-------------------~~~--------------~~~~~~~~l~~~~l~~~l~~~~~ 177 (286)
T PRK14275 132 FPK-SIFDNIAYGPRLHGIND-------------------KKQ--------------LEEIVEKSLRKAALWDEVSDRLD 177 (286)
T ss_pred Ccc-CHHHHHHhHHHhcCCCc-------------------HHH--------------HHHHHHHHHHHhCCccchhhHhh
Confidence 874 99999988643221100 000 001234456666663 3345
Q ss_pred ccccCcccCCCChHHHHHHHHHHHHhcCCCEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCceEEEEEecCcchHHhhcC
Q 000628 333 TMVGDEMRRGISGGQKKRVTTGEMLVGTANVLYMDEISTGLDSSTTFQICKFLKQMVHILDVTMIVALLQPAPETYDLFD 412 (1383)
Q Consensus 333 t~vg~~~~rGLSGGqkqRvsia~al~~~p~illLDEptsgLD~~t~~~i~~~L~~l~~~~~~t~ii~~~q~~~~~~~~~D 412 (1383)
+.+++ |||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++++ +.|+|++.|+ ..++.+++|
T Consensus 178 ~~~~~-----LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~~tvIivsH~-~~~~~~~~d 249 (286)
T PRK14275 178 KNALG-----LSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG--SYTIMIVTHN-MQQASRVSD 249 (286)
T ss_pred CChhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCC-HHHHHHhCC
Confidence 55544 999999999999999999999999999999999999999999999864 4666666554 457788999
Q ss_pred eEEEEcCCeEEEecChhHHH
Q 000628 413 DIILLSEGQIVYQGPRDNVL 432 (1383)
Q Consensus 413 ~i~lL~~G~iv~~G~~~~~~ 432 (1383)
++++|++|+++..|+.+++.
T Consensus 250 ~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 250 YTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 500
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=9.8e-33 Score=345.20 Aligned_cols=203 Identities=24% Similarity=0.293 Sum_probs=167.0
Q ss_pred ceEeeceeeEEeCCeEEEEeccCCCcHHHHHhhhcCCCCCceEEEEEEEcC-----------------------ccC---
Q 000628 880 LQLLHSVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG-----------------------YPK--- 933 (1383)
Q Consensus 880 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~g~~~G~i~i~g-----------------------~~~--- 933 (1383)
+.+|+|||+++++||++||+||||||||||+++|+|.....+.+|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~ 92 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTLEPE 92 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccccccccccccccccc
Confidence 469999999999999999999999999999999999741013479998872 111
Q ss_pred -------Ch---hcccceEEEEccC-CCCCCCCCHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccccCC
Q 000628 934 -------NQ---ETFARVSGYCEQN-DIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLP 1002 (1383)
Q Consensus 934 -------~~---~~~~~~~gyv~Q~-~~~~~~lTv~E~l~f~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~g~~ 1002 (1383)
.. ...++.++|++|+ +.+++.+||+|++.+..... ....++.++++.++++.++|.+..++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~---- 165 (520)
T TIGR03269 93 EVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEI---GYEGKEAVGRAVDLIEMVQLSHRITHI---- 165 (520)
T ss_pred chhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcC----
Confidence 00 1234679999997 67888899999998865332 123344456789999999998777766
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCCceeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhhceEEEEe
Q 000628 1003 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLLK 1081 (1383)
Q Consensus 1003 ~~~~LSgGqrqRl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~d~~~~l~ 1081 (1383)
+..|||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++++ .|+|||++||+++ .+.+.||++++|.
T Consensus 166 -~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~-~~~~~~d~i~~l~ 243 (520)
T TIGR03269 166 -ARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE-VIEDLSDKAIWLE 243 (520)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEe
Confidence 457999999999999999999999999999999999999999999999965 4899999999976 4667899999998
Q ss_pred cCcEEEEecCC
Q 000628 1082 RGGRVIYAGPL 1092 (1383)
Q Consensus 1082 ~gG~~~~~g~~ 1092 (1383)
+ |++++.|+.
T Consensus 244 ~-G~i~~~g~~ 253 (520)
T TIGR03269 244 N-GEIKEEGTP 253 (520)
T ss_pred C-CEEeeecCH
Confidence 5 788888875
Done!