BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000629
(1383 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FO4|A Chain A, Crystal Structure Of Xanthine Dehydrogenase Isolated From
Bovine Milk
pdb|1FO4|B Chain B, Crystal Structure Of Xanthine Dehydrogenase Isolated From
Bovine Milk
pdb|1V97|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase
Fyx-051 Bound Form
pdb|1V97|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase
Fyx-051 Bound Form
pdb|1VDV|A Chain A, Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
pdb|1VDV|B Chain B, Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
pdb|3BDJ|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
A Covalently Bound Oxipurinol Inhibitor
pdb|3BDJ|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
A Covalently Bound Oxipurinol Inhibitor
pdb|3AM9|A Chain A, Complex Of Bovine Xanthine Dehydrogenase And Trihydroxy
Fyx-051
pdb|3AM9|B Chain B, Complex Of Bovine Xanthine Dehydrogenase And Trihydroxy
Fyx-051
pdb|3AMZ|A Chain A, Bovine Xanthine Oxidoreductase Urate Bound Form
pdb|3AMZ|B Chain B, Bovine Xanthine Oxidoreductase Urate Bound Form
pdb|3AX7|A Chain A, Bovine Xanthine Oxidase, Protease Cleaved Form
pdb|3AX7|B Chain B, Bovine Xanthine Oxidase, Protease Cleaved Form
pdb|3AX9|A Chain A, Bovine Xanthone Oxidase, Protease Cleaved Form
pdb|3AX9|B Chain B, Bovine Xanthone Oxidase, Protease Cleaved Form
Length = 1332
Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust.
Identities = 423/1386 (30%), Positives = 671/1386 (48%), Gaps = 119/1386 (8%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPE 69
T +VF VNG+K + DP TTLL +LR + SKY+
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRL 61
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
D++ F+ ++CL +C+++ +TT EG+G++KT HP+ +R A H SQCGFCTPG+
Sbjct: 62 QDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIV 121
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDI 189
MS+++ L ++PEP T+ E E A GNLCRCTGYRPI ++FA +
Sbjct: 122 MSMYTLL-----RNQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFAKNGGC 169
Query: 190 EDLGINSFWAKGESKEVKISRLPPYKHNGE------LCRFPLF----LKKENSSAMLLDV 239
N+ K+ L P N E + P+F L+ ++ L
Sbjct: 170 CGGNGNNPNCCMNQKKDHTVTLSPSLFNPEEFMPLDPTQEPIFPPELLRLKDVPPKQLRF 229
Query: 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPEL 297
+G + I L+ +L+ + +KLV GNT +G + ++ + I +IPEL
Sbjct: 230 EGERVTWIQASTLKELLDL--KAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPEL 287
Query: 298 SVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSAS 357
+ + GI GA +S + L E + ++ VF+ + + A + +++ AS
Sbjct: 288 NAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVAS 347
Query: 358 VGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSRSIL 413
+GGN++ A SD+ V + +G + I++ G + M F + L IL
Sbjct: 348 LGGNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEIL 404
Query: 414 LSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRV 473
LS+EIP + F ++ A R + + + P ++V
Sbjct: 405 LSIEIP----------YSREDEFFSAFKQASR-REDDIAKVTCGMRVLFQP----GSMQV 449
Query: 474 NNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRD--SVVPEDGTSIPAYR 531
L +G + I A + + K N +L + L + S+ P+ + +R
Sbjct: 450 KELALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFR 508
Query: 532 SSLAVGFLYEFFGSLTEMKNGISRDWLCG-----YSNNVSLKDSHVQQNHKQFDESKVPT 586
+L + F ++F+ ++ + S+D CG Y++ L H N + F E VP
Sbjct: 509 RTLTLSFFFKFYLTVLKKLGKDSKD-KCGKLDPTYTSATLLFQKHPPANIQLFQE--VPN 565
Query: 587 LLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLA 646
S + V G P+ AA+QASGEA+Y DDIP N L+ + ST+ A
Sbjct: 566 GQSKEDTV----------GRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHA 615
Query: 647 RIKGIEF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFV 705
+IK I+ +++ VP V LS DIP G G +F E +FA + C G + V
Sbjct: 616 KIKSIDVSEAQKVPGFV-CFLSADDIP-GSNETG---LFNDETVFAKDTVTCVGHIIGAV 670
Query: 706 VADSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMN 765
VAD+ ++ YE +L P I+++E+A+ +S + + GD+ KG +
Sbjct: 671 VADTPEHAERAAHVVKVTYE--DL-PAIITIEDAIKNNSFYGSELKIEK---GDLKKGFS 724
Query: 766 EADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIP 824
EAD+ +++ E+ +G Q +FY+ET +A+P E+ + ++ S Q + +A+ LG+P
Sbjct: 725 EADN-VVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVP 783
Query: 825 EHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMK 884
+ + V +R+GG FGGK ++ V+ A ALAAYK PVR + R DM++ GGRHP
Sbjct: 784 VNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFL 843
Query: 885 ITYSVGFKSNGKITALQLNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRT 943
Y VGF G I AL+++ +AG S D+S IM + Y + ++C+T
Sbjct: 844 ARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKT 903
Query: 944 NLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEY 1003
NL S +A R G Q FIAE + VA T + + VR N++ L F + G
Sbjct: 904 NLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG-- 961
Query: 1004 AEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPG 1058
+++P WD+ SS + R + +FN+ N W+K+G+C +P ++ L
Sbjct: 962 --FSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGA 1019
Query: 1059 KVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSV 1118
+ + +DGSV+V GG EMGQGL TK+ Q+A+ AL + K+ + + T +V
Sbjct: 1020 LIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTV 1071
Query: 1119 IQGGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNL 1178
TA S +++ Q V + C + + + WE + A+ V+L
Sbjct: 1072 PNSSPTAASVSTDIYGQAVYEACQ----TILKRLEPFKKKNPDGSWEDWVMAAYQDRVSL 1127
Query: 1179 SASSMY-VPDF---------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLN 1228
S + Y P+ + Y YG A SEVE++ LTG+ +R+DI+ D G SLN
Sbjct: 1128 STTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLN 1187
Query: 1229 PAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSG 1288
PA+D+GQ+EGAFVQG+G F LEE + +G + + G TYKIP +IP +F V +L
Sbjct: 1188 PAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDC 1247
Query: 1289 HHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMP 1348
+KK + +SKA GEPPL L SV A + AIR AR Q + N + L+ PAT
Sbjct: 1248 PNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPE 1303
Query: 1349 VVKELC 1354
++ C
Sbjct: 1304 KIRNAC 1309
>pdb|1N5X|A Chain A, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei-
6720 Bound
pdb|1N5X|B Chain B, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei-
6720 Bound
Length = 1331
Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust.
Identities = 423/1386 (30%), Positives = 671/1386 (48%), Gaps = 119/1386 (8%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPE 69
T +VF VNG+K + DP TTLL +LR + SKY+
Sbjct: 1 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRL 60
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
D++ F+ ++CL +C+++ +TT EG+G++KT HP+ +R A H SQCGFCTPG+
Sbjct: 61 QDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIV 120
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDI 189
MS+++ L ++PEP T+ E E A GNLCRCTGYRPI ++FA +
Sbjct: 121 MSMYTLL-----RNQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFAKNGGC 168
Query: 190 EDLGINSFWAKGESKEVKISRLPPYKHNGE------LCRFPLF----LKKENSSAMLLDV 239
N+ K+ L P N E + P+F L+ ++ L
Sbjct: 169 CGGNGNNPNCCMNQKKDHTVTLSPSLFNPEEFMPLDPTQEPIFPPELLRLKDVPPKQLRF 228
Query: 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPEL 297
+G + I L+ +L+ + +KLV GNT +G + ++ + I +IPEL
Sbjct: 229 EGERVTWIQASTLKELLDL--KAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPEL 286
Query: 298 SVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSAS 357
+ + GI GA +S + L E + ++ VF+ + + A + +++ AS
Sbjct: 287 NAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVAS 346
Query: 358 VGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSRSIL 413
+GGN++ A SD+ V + +G + I++ G + M F + L IL
Sbjct: 347 LGGNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEIL 403
Query: 414 LSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRV 473
LS+EIP + F ++ A R + + + P ++V
Sbjct: 404 LSIEIP----------YSREDEFFSAFKQASR-REDDIAKVTCGMRVLFQP----GSMQV 448
Query: 474 NNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRD--SVVPEDGTSIPAYR 531
L +G + I A + + K N +L + L + S+ P+ + +R
Sbjct: 449 KELALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFR 507
Query: 532 SSLAVGFLYEFFGSLTEMKNGISRDWLCG-----YSNNVSLKDSHVQQNHKQFDESKVPT 586
+L + F ++F+ ++ + S+D CG Y++ L H N + F E VP
Sbjct: 508 RTLTLSFFFKFYLTVLKKLGKDSKD-KCGKLDPTYTSATLLFQKHPPANIQLFQE--VPN 564
Query: 587 LLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLA 646
S + V G P+ AA+QASGEA+Y DDIP N L+ + ST+ A
Sbjct: 565 GQSKEDTV----------GRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHA 614
Query: 647 RIKGIEF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFV 705
+IK I+ +++ VP V LS DIP G G +F E +FA + C G + V
Sbjct: 615 KIKSIDVSEAQKVPGFV-CFLSADDIP-GSNETG---LFNDETVFAKDTVTCVGHIIGAV 669
Query: 706 VADSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMN 765
VAD+ ++ YE +L P I+++E+A+ +S + + GD+ KG +
Sbjct: 670 VADTPEHAERAAHVVKVTYE--DL-PAIITIEDAIKNNSFYGSELKIEK---GDLKKGFS 723
Query: 766 EADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIP 824
EAD+ +++ E+ +G Q +FY+ET +A+P E+ + ++ S Q + +A+ LG+P
Sbjct: 724 EADN-VVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVP 782
Query: 825 EHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMK 884
+ + V +R+GG FGGK ++ V+ A ALAAYK PVR + R DM++ GGRHP
Sbjct: 783 VNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFL 842
Query: 885 ITYSVGFKSNGKITALQLNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRT 943
Y VGF G I AL+++ +AG S D+S IM + Y + ++C+T
Sbjct: 843 ARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKT 902
Query: 944 NLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEY 1003
NL S +A R G Q FIAE + VA T + + VR N++ L F + G
Sbjct: 903 NLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG-- 960
Query: 1004 AEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPG 1058
+++P WD+ SS + R + +FN+ N W+K+G+C +P ++ L
Sbjct: 961 --FSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGA 1018
Query: 1059 KVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSV 1118
+ + +DGSV+V GG EMGQGL TK+ Q+A+ AL + K+ + + T +V
Sbjct: 1019 LIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTV 1070
Query: 1119 IQGGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNL 1178
TA S +++ Q V + C + + + WE + A+ V+L
Sbjct: 1071 PNSSPTAASVSTDIYGQAVYEACQ----TILKRLEPFKKKNPDGSWEDWVMAAYQDRVSL 1126
Query: 1179 SASSMY-VPDF---------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLN 1228
S + Y P+ + Y YG A SEVE++ LTG+ +R+DI+ D G SLN
Sbjct: 1127 STTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLN 1186
Query: 1229 PAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSG 1288
PA+D+GQ+EGAFVQG+G F LEE + +G + + G TYKIP +IP +F V +L
Sbjct: 1187 PAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDC 1246
Query: 1289 HHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMP 1348
+KK + +SKA GEPPL L SV A + AIR AR Q + N + L+ PAT
Sbjct: 1247 PNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPE 1302
Query: 1349 VVKELC 1354
++ C
Sbjct: 1303 KIRNAC 1308
>pdb|3UNA|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nad Bound
pdb|3UNA|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nad Bound
pdb|3UNC|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase To
1.65a Resolution
pdb|3UNC|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase To
1.65a Resolution
pdb|3UNI|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nadh Bound
pdb|3UNI|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nadh Bound
Length = 1332
Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust.
Identities = 422/1386 (30%), Positives = 670/1386 (48%), Gaps = 119/1386 (8%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPE 69
T +VF VNG+K + DP TTLL +LR + SKY+
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRL 61
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
D++ F+ ++CL +C+++ +TT EG+G++KT HP+ +R A H SQCGFCTPG+
Sbjct: 62 QDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIV 121
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDI 189
MS+++ L ++PEP T+ E E A GNLCRCTGYRPI ++FA +
Sbjct: 122 MSMYTLL-----RNQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFAKNGGC 169
Query: 190 EDLGINSFWAKGESKEVKISRLPPYKHNGE------LCRFPLF----LKKENSSAMLLDV 239
N+ K+ L P N E + P+F L+ ++ L
Sbjct: 170 CGGNGNNPNCCMNQKKDHTVTLSPSLFNPEEFMPLDPTQEPIFPPELLRLKDVPPKQLRF 229
Query: 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPEL 297
+G + I L+ +L+ + +KLV GNT +G + ++ + I +IPEL
Sbjct: 230 EGERVTWIQASTLKELLDL--KAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPEL 287
Query: 298 SVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSAS 357
+ + GI GA +S + L E + ++ VF+ + + A + +++ AS
Sbjct: 288 NAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVAS 347
Query: 358 VGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSRSIL 413
+GGN++ A SD+ V + +G + I++ G + M F + L IL
Sbjct: 348 LGGNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEIL 404
Query: 414 LSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRV 473
LS+EIP + F ++ A R + + + P ++V
Sbjct: 405 LSIEIP----------YSREDEFFSAFKQASR-REDDIAKVTCGMRVLFQP----GSMQV 449
Query: 474 NNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRD--SVVPEDGTSIPAYR 531
L +G + I A + + K N +L + L + S+ P+ + +R
Sbjct: 450 KELALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFR 508
Query: 532 SSLAVGFLYEFFGSLTEMKNGISRDWLCG-----YSNNVSLKDSHVQQNHKQFDESKVPT 586
+L + F ++F+ ++ + S+D CG Y++ L N + F E VP
Sbjct: 509 RTLTLSFFFKFYLTVLKKLGKDSKD-KCGKLDPTYTSATLLFQKDPPANIQLFQE--VPN 565
Query: 587 LLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLA 646
S + V G P+ AA+QASGEA+Y DDIP N L+ + ST+ A
Sbjct: 566 GQSKEDTV----------GRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHA 615
Query: 647 RIKGIEF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFV 705
+IK I+ +++ VP V LS DIP G G +F E +FA + C G + V
Sbjct: 616 KIKSIDVSEAQKVPGFV-CFLSADDIP-GSNETG---LFNDETVFAKDTVTCVGHIIGAV 670
Query: 706 VADSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMN 765
VAD+ ++ YE +L P I+++E+A+ +S + + GD+ KG +
Sbjct: 671 VADTPEHAERAAHVVKVTYE--DL-PAIITIEDAIKNNSFYGSELKIEK---GDLKKGFS 724
Query: 766 EADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIP 824
EAD+ +++ E+ +G Q +FY+ET +A+P E+ + ++ S Q + +A+ LG+P
Sbjct: 725 EADN-VVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVP 783
Query: 825 EHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMK 884
+ + V +R+GG FGGK ++ V+ A ALAAYK PVR + R DM++ GGRHP
Sbjct: 784 VNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFL 843
Query: 885 ITYSVGFKSNGKITALQLNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRT 943
Y VGF G I AL+++ +AG S D+S IM + Y + ++C+T
Sbjct: 844 ARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKT 903
Query: 944 NLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEY 1003
NL S +A R G Q FIAE + VA T + + VR N++ L F + G
Sbjct: 904 NLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG-- 961
Query: 1004 AEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPG 1058
+++P WD+ SS + R + +FN+ N W+K+G+C +P ++ L
Sbjct: 962 --FSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGA 1019
Query: 1059 KVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSV 1118
+ + +DGSV+V GG EMGQGL TK+ Q+A+ AL + K+ + + T +V
Sbjct: 1020 LIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTV 1071
Query: 1119 IQGGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNL 1178
TA S +++ Q V + C + + + WE + A+ V+L
Sbjct: 1072 PNSSPTAASVSTDIYGQAVYEACQ----TILKRLEPFKKKNPDGSWEDWVMAAYQDRVSL 1127
Query: 1179 SASSMY-VPDF---------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLN 1228
S + Y P+ + Y YG A SEVE++ LTG+ +R+DI+ D G SLN
Sbjct: 1128 STTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLN 1187
Query: 1229 PAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSG 1288
PA+D+GQ+EGAFVQG+G F LEE + +G + + G TYKIP +IP +F V +L
Sbjct: 1188 PAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDC 1247
Query: 1289 HHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMP 1348
+KK + +SKA GEPPL L SV A + AIR AR Q + N + L+ PAT
Sbjct: 1248 PNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPE 1303
Query: 1349 VVKELC 1354
++ C
Sbjct: 1304 KIRNAC 1309
>pdb|2E1Q|A Chain A, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|B Chain B, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|C Chain C, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|D Chain D, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
Length = 1333
Score = 572 bits (1474), Expect = e-163, Method: Compositional matrix adjust.
Identities = 420/1382 (30%), Positives = 664/1382 (48%), Gaps = 110/1382 (7%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPE 69
T +VF VNG K + DP TTLL +LR SKY+
Sbjct: 2 TADKLVFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDRL 61
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
+++ F+ ++CL +CS++ +TT EG+G++KT HP+ +R A H SQCGFCTPG+
Sbjct: 62 QNKIVHFSANACLAPICSLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIV 121
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDI 189
MS+++ L ++PEP T+ E E A GNLCRCTGYRPI ++FA D
Sbjct: 122 MSMYTLL-----RNQPEP-------TMEEIENAFQGNLCRCTGYRPILQGFRTFARDGGC 169
Query: 190 EDLGI---NSFWAKGESKEVKIS-------RLPPYKHNGELCRFPLFLKKENSSAMLLDV 239
N + + V +S P E P L+ +++ L
Sbjct: 170 CGGDGNNPNCCMNQKKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPRKQLRF 229
Query: 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPEL 297
+G + I L+ +L+ + +KLV GNT +G + ++ + + +IPEL
Sbjct: 230 EGERVTWIQASTLKELLDL--KAQHPDAKLVVGNTEIGIEMKFKNMLFPMIVCPAWIPEL 287
Query: 298 SVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSAS 357
+ + GI GA +S + L + + ++ VF+ + + A + +++ AS
Sbjct: 288 NSVEHGPDGISFGAACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAGKQVKSVAS 347
Query: 358 VGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSRSIL 413
VGGN++ A SD+ V + +GA + +++ G + M F + L IL
Sbjct: 348 VGGNIITASPI---SDLNPVFMASGAKLTLVSRGTRRTVQMDHTFFPGYRKTLLSPEEIL 404
Query: 414 LSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRV 473
LS+EIP + F ++ A R + + + + P T V
Sbjct: 405 LSIEIP----------YSREGEYFSAFKQASR-REDDIAKVTSGMRVLFKPGTT----EV 449
Query: 474 NNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSV-VPEDGTS-IPAYR 531
L +G + I A + + K+ +L + L + + +P D + +R
Sbjct: 450 QELALCYGGMANR-TISALKTTQRQLSKLWKEELLQDVCAGLAEELHLPPDAPGGMVDFR 508
Query: 532 SSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSA 591
+L + F ++F+ ++ + + + CG + + + Q P +
Sbjct: 509 CTLTLSFFFKFYLTVLQKLGQENLEDKCGKLDPTFASATLLFQKDP-------PADVQLF 561
Query: 592 EQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGI 651
++V + E VG P+ A +QASGEA+Y DDIP N L + ST+ A+IK I
Sbjct: 562 QEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKIKSI 621
Query: 652 EF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQ 710
+ +++ VP V +S D+P G NI I E +FA + C G + VVAD+
Sbjct: 622 DTSEAKKVPGFV-CFISADDVP--GSNITG--ICNDETVFAKDKVTCVGHIIGAVVADTP 676
Query: 711 KNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHR 770
++ YE P I+++E+A+ +S + P K GD+ KG +EAD+
Sbjct: 677 EHTQRAAQGVKITYEE---LPAIITIEDAIKNNSFYG-PELKIEK--GDLKKGFSEADN- 729
Query: 771 ILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVR 829
+++ EI +G Q +FY+ET +AVP E + ++ S Q + +A+ LG+P + +
Sbjct: 730 VVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPANRIV 789
Query: 830 VITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSV 889
V +R+GG FGGK ++ V+TA ALAAYK RPVR + R DM++ GGRHP Y V
Sbjct: 790 VRVKRMGGGFGGKVTRSTVVSTAVALAAYKTGRPVRCMLDRDEDMLITGGRHPFLARYKV 849
Query: 890 GFKSNGKITALQLNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSR 948
GF G + AL+++ + G + D+S IM + Y + ++C+TNLPS
Sbjct: 850 GFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYKIPNIRGTGRLCKTNLPSN 909
Query: 949 SAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTL 1008
+A R G QG IAE + VA T M + VR NL+ L F + G +TL
Sbjct: 910 TAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFNQKLEG----FTL 965
Query: 1009 PLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKVSIL 1063
P W++ SS ++ R + +FN+ N W+K+G+C +P ++ L + +
Sbjct: 966 PRCWEECLASSQYHARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALLHVY 1025
Query: 1064 SDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGF 1123
+DGSV++ GG EMGQGL TK+ Q+A+ AL K+ + + T +V
Sbjct: 1026 TDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPT--------SKIYISETSTNTVPNTSP 1077
Query: 1124 TAGSTTSEASCQVVRDCCN-IXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASS 1182
TA S +++ + Q V C I G WE + A++ +V+LSA+
Sbjct: 1078 TAASVSADLNGQAVYAACQTILKRLEPYKKKNPSGS-----WEDWVTAAYMDTVSLSATG 1132
Query: 1183 MY-VPDF---------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVD 1232
Y P+ Y +YG A SEVE++ LTG+ +R+DI+ D G SLNPA+D
Sbjct: 1133 FYRTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAID 1192
Query: 1233 LGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKK 1292
+GQ+EGAFVQG+G F LEE + +G + + G TYKIP +IP +F V +L +KK
Sbjct: 1193 IGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKK 1252
Query: 1293 RVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKE 1352
+ +SKA GEPPL LA S+ A + AIR AR Q N L+ PAT ++
Sbjct: 1253 AIYASKAVGEPPLFLAASIFFAIKDAIRAARAQHTG----NNVKELFRLDSPATPEKIRN 1308
Query: 1353 LC 1354
C
Sbjct: 1309 AC 1310
>pdb|2CKJ|A Chain A, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|B Chain B, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|C Chain C, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|D Chain D, Human Milk Xanthine Oxidoreductase
Length = 1333
Score = 571 bits (1471), Expect = e-162, Method: Compositional matrix adjust.
Identities = 420/1382 (30%), Positives = 664/1382 (48%), Gaps = 110/1382 (7%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPE 69
T +VF VNG K + DP TTLL +LR SKY+
Sbjct: 2 TADKLVFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDRL 61
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
+++ F+ ++CL +CS++ +TT EG+G++KT HP+ +R A H SQCGFCTPG+
Sbjct: 62 QNKIVHFSANACLAPICSLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIV 121
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDI 189
MS+++ L ++PEP T+ E E A GNLCRCTGYRPI ++FA D
Sbjct: 122 MSMYTLL-----RNQPEP-------TMEEIENAFQGNLCRCTGYRPILQGFRTFARDGGC 169
Query: 190 EDLGI---NSFWAKGESKEVKIS-------RLPPYKHNGELCRFPLFLKKENSSAMLLDV 239
N + + V +S P E P L+ +++ L
Sbjct: 170 CGGDGNNPNCCMNQKKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPRKQLRF 229
Query: 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPEL 297
+G + I L+ +L+ + +KLV GNT +G + ++ + + +IPEL
Sbjct: 230 EGERVTWIQASTLKELLDL--KAQHPDAKLVVGNTEIGIEMKFKNMLFPMIVCPAWIPEL 287
Query: 298 SVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSAS 357
+ + GI GA +S + L + + ++ VF+ + + A + +++ AS
Sbjct: 288 NSVEHGPDGISFGAACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAGKQVKSVAS 347
Query: 358 VGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSRSIL 413
VGGN++ A SD+ V + +GA + +++ G + M F + L IL
Sbjct: 348 VGGNIITASPI---SDLNPVFMASGAKLTLVSRGTRRTVQMDHTFFPGYRKTLLSPEEIL 404
Query: 414 LSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRV 473
LS+EIP + F ++ A R + + + + P T V
Sbjct: 405 LSIEIP----------YSREGEYFSAFKQASR-REDDIAKVTSGMRVLFKPGTT----EV 449
Query: 474 NNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSV-VPEDGTS-IPAYR 531
L +G + I A + + K+ +L + L + + +P D + +R
Sbjct: 450 QELALCYGGMANR-TISALKTTQRQLSKLWKEELLQDVCAGLAEELHLPPDAPGGMVDFR 508
Query: 532 SSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSA 591
+L + F ++F+ ++ + + + CG + + + Q P +
Sbjct: 509 CTLTLSFFFKFYLTVLQKLGQENLEDKCGKLDPTFASATLLFQKDP-------PADVQLF 561
Query: 592 EQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGI 651
++V + E VG P+ A +QASGEA+Y DDIP N L + ST+ A+IK I
Sbjct: 562 QEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKIKSI 621
Query: 652 EF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQ 710
+ +++ VP V +S D+P G NI I E +FA + C G + VVAD+
Sbjct: 622 DTSEAKKVPGFV-CFISADDVP--GSNITG--ICNDETVFAKDKVTCVGHIIGAVVADTP 676
Query: 711 KNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHR 770
++ YE P I+++E+A+ +S + P K GD+ KG +EAD+
Sbjct: 677 EHTQRAAQGVKITYEE---LPAIITIEDAIKNNSFYG-PELKIEK--GDLKKGFSEADN- 729
Query: 771 ILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVR 829
+++ EI +G Q +FY+ET +AVP E + ++ S Q + +A+ LG+P + +
Sbjct: 730 VVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPANRIV 789
Query: 830 VITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSV 889
V +R+GG FGGK ++ V+TA ALAAYK RPVR + R DM++ GGRHP Y V
Sbjct: 790 VRVKRMGGGFGGKETRSTVVSTAVALAAYKTGRPVRCMLDRDEDMLITGGRHPFLARYKV 849
Query: 890 GFKSNGKITALQLNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSR 948
GF G + AL+++ + G + D+S IM + Y + ++C+TNLPS
Sbjct: 850 GFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYKIPNIRGTGRLCKTNLPSN 909
Query: 949 SAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTL 1008
+A R G QG IAE + VA T M + VR NL+ L F + G +TL
Sbjct: 910 TAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFNQKLEG----FTL 965
Query: 1009 PLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKVSIL 1063
P W++ SS ++ R + +FN+ N W+K+G+C +P ++ L + +
Sbjct: 966 PRCWEECLASSQYHARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALLHVY 1025
Query: 1064 SDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGF 1123
+DGSV++ GG EMGQGL TK+ Q+A+ AL K+ + + T +V
Sbjct: 1026 TDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPT--------SKIYISETSTNTVPNTSP 1077
Query: 1124 TAGSTTSEASCQVVRDCCN-IXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASS 1182
TA S +++ + Q V C I G WE + A++ +V+LSA+
Sbjct: 1078 TAASVSADLNGQAVYAACQTILKRLEPYKKKNPSGS-----WEDWVTAAYMDTVSLSATG 1132
Query: 1183 MY-VPDF---------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVD 1232
Y P+ Y +YG A SEVE++ LTG+ +R+DI+ D G SLNPA+D
Sbjct: 1133 FYRTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAID 1192
Query: 1233 LGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKK 1292
+GQ+EGAFVQG+G F LEE + +G + + G TYKIP +IP +F V +L +KK
Sbjct: 1193 IGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKK 1252
Query: 1293 RVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKE 1352
+ +SKA GEPPL LA S+ A + AIR AR Q N L+ PAT ++
Sbjct: 1253 AIYASKAVGEPPLFLAASIFFAIKDAIRAARAQHTG----NNVKELFRLDSPATPEKIRN 1308
Query: 1353 LC 1354
C
Sbjct: 1309 AC 1310
>pdb|2E3T|A Chain A, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant
(W335a And F336l)
pdb|2E3T|B Chain B, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant
(W335a And F336l)
Length = 1331
Score = 570 bits (1468), Expect = e-162, Method: Compositional matrix adjust.
Identities = 410/1384 (29%), Positives = 669/1384 (48%), Gaps = 116/1384 (8%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPE 69
T +VF VNG+K + DP TTLL +LR SKY+
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLVYLRRKLGLCGTKLGCGEGGCGACTVMISKYDRL 61
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
+++ F++++CL +CS++ +TT EG+GN++ HP+ +R A H SQCGFCTPG+
Sbjct: 62 QNKIVHFSVNACLAPICSLHHVAVTTVEGIGNTQK-LHPVQERIARSHGSQCGFCTPGIV 120
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDI 189
MS+++ L ++PEP T+ E E A GNLCRCTGYRPI ++FA D
Sbjct: 121 MSMYTLL-----RNQPEP-------TVEEIENAFQGNLCRCTGYRPILQGFRTFAKDGGC 168
Query: 190 EDLGI---NSFWAKGESKEVKIS-------RLPPYKHNGELCRFPLFLKKENSSAMLLDV 239
N + + + V +S P E P L+ +++ L
Sbjct: 169 CGGSGNNPNCCMNQTKDQTVSLSPSLFNPEDFKPLDPTQEPIFPPELLRLKDTPQKKLRF 228
Query: 240 KG---SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYI 294
+G +W +++EL ++ + +KLV GNT +G + ++ + + +I
Sbjct: 229 EGERVTWIQASTMEELLDL-----KAQHPDAKLVVGNTEIGIEMKFKNMLFPLIVCPAWI 283
Query: 295 PELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRN 354
PEL+ + GI GA+ +S L EE + + VF+ + + +A + +++
Sbjct: 284 PELNSVVHGPEGISFGASCPLSLVESVLAEEIAKLPEQKTEVFRGVMEQLRALAGKQVKS 343
Query: 355 SASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSR 410
AS+GGN++ A SD+ V + +GA + +++ G + M F + L
Sbjct: 344 VASIGGNIITASPI---SDLNPVFMASGAKLTLVSRGTRRTVRMDHTFFPGYRKTLLRPE 400
Query: 411 SILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDG 470
ILLS+EIP + F ++ A R + + + + P
Sbjct: 401 EILLSIEIP----------YSKEGEFFSAFKQASR-REDDIAKVTSGMRVLFKP----GT 445
Query: 471 IRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRD--SVVPEDGTSIP 528
I V L FG + I A + K N +L L + + P+ +
Sbjct: 446 IEVQELSLCFGGMADR-TISALKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMV 504
Query: 529 AYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLL 588
+R +L + F ++F+ ++ + + +CG + + + Q P +
Sbjct: 505 EFRRTLTLSFFFKFYLTVLQKLGRADLEDMCGKLDPTFASATLLFQKDP-------PANV 557
Query: 589 SSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARI 648
++V + E VG P+ A +QASGEA+Y DDIP N L + ST+ A+I
Sbjct: 558 QLFQEVPKDQSEEDMVGRPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKI 617
Query: 649 KGIEF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVA 707
I+ +++ VP V L+ +D+P N + +F E +FA + C G + VVA
Sbjct: 618 TSIDTSEAKKVPGFV-CFLTAEDVP----NSNATGLFNDETVFAKDEVTCVGHIIGAVVA 672
Query: 708 DSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEA 767
D+ ++ YE +L P I+++++A++ +S + + GD+ KG +EA
Sbjct: 673 DTPEHAQRAARGVKITYE--DL-PAIITIQDAINNNSFYGSEIKIEK---GDLKKGFSEA 726
Query: 768 DHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEH 826
D+ +++ E+ +G Q +FY+ET +AVP E + ++ S Q + +A+ LG+P++
Sbjct: 727 DN-VVSGELYIGGQEHFYLETNCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPDN 785
Query: 827 NVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKIT 886
+ V +R+GG FGGK ++ V+TA ALAA+K RPVR + R DM++ GGRHP
Sbjct: 786 RIVVRVKRMGGGFGGKETRSTVVSTALALAAHKTGRPVRCMLDRDEDMLITGGRHPFLAK 845
Query: 887 YSVGFKSNGKITALQLNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNL 945
Y VGF G + AL++ + G + D+S IM + Y + ++C+TNL
Sbjct: 846 YKVGFMKTGTVVALEVAHFSNGGNTEDLSRSIMERALFHMDNAYKIPNIRGTGRICKTNL 905
Query: 946 PSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAE 1005
PS +A R G QG IAE + VA T + + VR N++ L F + G
Sbjct: 906 PSNTAFRGFGGPQGMLIAEYWMSEVAITCGLPAEEVRRKNMYKEGDLTHFNQKLEG---- 961
Query: 1006 YTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKV 1060
+TLP WD+ SS + R +++FNR N W+K+G+C +P ++ L V
Sbjct: 962 FTLPRCWDECIASSQYLARKREVEKFNRENCWKKRGLCIIPTKFGISFTLPFLNQGGALV 1021
Query: 1061 SILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQ 1120
+ +DGSV++ GG EMGQGL TK+ Q+A+ AL K+ + + T +V
Sbjct: 1022 HVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPT--------SKIHISETSTNTVPN 1073
Query: 1121 GGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSA 1180
TA S +++ + Q V + C + + WE + A+ +V+LSA
Sbjct: 1074 TSPTAASASADLNGQGVYEACQ----TILKRLEPFKKKKPTGPWEAWVMDAYTSAVSLSA 1129
Query: 1181 SSMY-VPDF---------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPA 1230
+ Y P+ Y +YG A SEVE++ LTG+ +R+DI+ D G SLNPA
Sbjct: 1130 TGFYKTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPA 1189
Query: 1231 VDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHH 1290
+D+GQ+EGAFVQG+G F +EE + +G + + G TYKIP +IP +F V +L +
Sbjct: 1190 IDIGQVEGAFVQGLGLFTMEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPN 1249
Query: 1291 KKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVV 1350
K+ + +SKA GEPPL LA S+ A + AIR AR Q + + L+ PAT +
Sbjct: 1250 KRAIYASKAVGEPPLFLASSIFFAIKDAIRAARAQ-----HGDNAKQLFQLDSPATPEKI 1304
Query: 1351 KELC 1354
+ C
Sbjct: 1305 RNAC 1308
>pdb|3AN1|A Chain A, Crystal Structure Of Rat D428a Mutant, Urate Bound Form
pdb|3AN1|B Chain B, Crystal Structure Of Rat D428a Mutant, Urate Bound Form
Length = 1331
Score = 568 bits (1464), Expect = e-162, Method: Compositional matrix adjust.
Identities = 410/1384 (29%), Positives = 668/1384 (48%), Gaps = 116/1384 (8%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPE 69
T +VF VNG+K + DP TTLL +LR SKY+
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLVYLRRKLGLCGTKLGCGEGGCGACTVMISKYDRL 61
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
+++ F++++CL +CS++ +TT EG+GN++ HP+ +R A H SQCGFCTPG+
Sbjct: 62 QNKIVHFSVNACLAPICSLHHVAVTTVEGIGNTQK-LHPVQERIARSHGSQCGFCTPGIV 120
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDI 189
MS+++ L ++PEP T+ E E A GNLCRCTGYRPI ++FA D
Sbjct: 121 MSMYTLL-----RNQPEP-------TVEEIENAFQGNLCRCTGYRPILQGFRTFAKDGGC 168
Query: 190 EDLGI---NSFWAKGESKEVKIS-------RLPPYKHNGELCRFPLFLKKENSSAMLLDV 239
N + + + V +S P E P L+ +++ L
Sbjct: 169 CGGSGNNPNCCMNQTKDQTVSLSPSLFNPEDFKPLDPTQEPIFPPELLRLKDTPQKKLRF 228
Query: 240 KG---SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYI 294
+G +W +++EL ++ + +KLV GNT +G + ++ + + +I
Sbjct: 229 EGERVTWIQASTMEELLDL-----KAQHPDAKLVVGNTEIGIEMKFKNMLFPLIVCPAWI 283
Query: 295 PELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRN 354
PEL+ + GI GA+ +S L EE + + VF+ + + A + +++
Sbjct: 284 PELNSVVHGPEGISFGASCPLSLVESVLAEEIAKLPEQKTEVFRGVMEQLRWFAGKQVKS 343
Query: 355 SASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSR 410
AS+GGN++ A SD+ V + +GA + +++ G + M F + L
Sbjct: 344 VASIGGNIITASPI---SDLNPVFMASGAKLTLVSRGTRRTVRMDHTFFPGYRKTLLRPE 400
Query: 411 SILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDG 470
ILLS+EIP + F ++ A R + + + + P
Sbjct: 401 EILLSIEIP----------YSKEGEFFSAFKQASRREAD-IAKVTSGMRVLFKP----GT 445
Query: 471 IRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRD--SVVPEDGTSIP 528
I V L FG + I A + K N +L L + + P+ +
Sbjct: 446 IEVQELSLCFGGMADR-TISALKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMV 504
Query: 529 AYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLL 588
+R +L + F ++F+ ++ + + +CG + + + Q P +
Sbjct: 505 EFRRTLTLSFFFKFYLTVLQKLGRADLEDMCGKLDPTFASATLLFQKDP-------PANV 557
Query: 589 SSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARI 648
++V + E VG P+ A +QASGEA+Y DDIP N L + ST+ A+I
Sbjct: 558 QLFQEVPKDQSEEDMVGRPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKI 617
Query: 649 KGIEF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVA 707
I+ +++ VP V L+ +D+P N + +F E +FA + C G + VVA
Sbjct: 618 TSIDTSEAKKVPGFV-CFLTAEDVP----NSNATGLFNDETVFAKDEVTCVGHIIGAVVA 672
Query: 708 DSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEA 767
D+ ++ YE +L P I+++++A++ +S + + GD+ KG +EA
Sbjct: 673 DTPEHAQRAARGVKITYE--DL-PAIITIQDAINNNSFYGSEIKIEK---GDLKKGFSEA 726
Query: 768 DHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEH 826
D+ +++ E+ +G Q +FY+ET +AVP E + ++ S Q + +A+ LG+P++
Sbjct: 727 DN-VVSGELYIGGQEHFYLETNCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPDN 785
Query: 827 NVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKIT 886
+ V +R+GG FGGK ++ V+TA ALAA+K RPVR + R DM++ GGRHP
Sbjct: 786 RIVVRVKRMGGGFGGKETRSTVVSTALALAAHKTGRPVRCMLDRDEDMLITGGRHPFLAK 845
Query: 887 YSVGFKSNGKITALQLNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNL 945
Y VGF G + AL++ + G + D+S IM + Y + ++C+TNL
Sbjct: 846 YKVGFMKTGTVVALEVAHFSNGGNTEDLSRSIMERALFHMDNAYKIPNIRGTGRICKTNL 905
Query: 946 PSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAE 1005
PS +A R G QG IAE + VA T + + VR N++ L F + G
Sbjct: 906 PSNTAFRGFGGPQGMLIAEYWMSEVAITCGLPAEEVRRKNMYKEGDLTHFNQKLEG---- 961
Query: 1006 YTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKV 1060
+TLP WD+ SS + R +++FNR N W+K+G+C +P ++ L V
Sbjct: 962 FTLPRCWDECIASSQYLARKREVEKFNRENCWKKRGLCIIPTKFGISFTLPFLNQGGALV 1021
Query: 1061 SILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQ 1120
+ +DGSV++ GG EMGQGL TK+ Q+A+ AL K+ + + T +V
Sbjct: 1022 HVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPT--------SKIHISETSTNTVPN 1073
Query: 1121 GGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSA 1180
TA S +++ + Q V + C + + WE + A+ +V+LSA
Sbjct: 1074 TSPTAASASADLNGQGVYEACQ----TILKRLEPFKKKKPTGPWEAWVMDAYTSAVSLSA 1129
Query: 1181 SSMY-VPDF---------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPA 1230
+ Y P+ Y +YG A SEVE++ LTG+ +R+DI+ D G SLNPA
Sbjct: 1130 TGFYKTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPA 1189
Query: 1231 VDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHH 1290
+D+GQ+EGAFVQG+G F +EE + +G + + G TYKIP +IP +F V +L +
Sbjct: 1190 IDIGQVEGAFVQGLGLFTMEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPN 1249
Query: 1291 KKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVV 1350
K+ + +SKA GEPPL LA S+ A + AIR AR Q + + L+ PAT +
Sbjct: 1250 KRAIYASKAVGEPPLFLASSIFFAIKDAIRAARAQ-----HGDNAKQLFQLDSPATPEKI 1304
Query: 1351 KELC 1354
+ C
Sbjct: 1305 RNAC 1308
>pdb|1WYG|A Chain A, Crystal Structure Of A Rat Xanthine Dehydrogenase Triple
Mutant (C535a, C992r And C1324s)
Length = 1331
Score = 565 bits (1455), Expect = e-161, Method: Compositional matrix adjust.
Identities = 409/1384 (29%), Positives = 667/1384 (48%), Gaps = 116/1384 (8%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPE 69
T +VF VNG+K + DP TTLL +LR SKY+
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLVYLRRKLGLCGTKLGCGEGGCGACTVMISKYDRL 61
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
+++ F++++CL +CS++ +TT EG+GN++ HP+ +R A H SQCGFCTPG+
Sbjct: 62 QNKIVHFSVNACLAPICSLHHVAVTTVEGIGNTQK-LHPVQERIARSHGSQCGFCTPGIV 120
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDI 189
MS+++ L ++PEP T+ E E A GNLCRCTGYRPI ++FA D
Sbjct: 121 MSMYTLL-----RNQPEP-------TVEEIENAFQGNLCRCTGYRPILQGFRTFAKDGGC 168
Query: 190 EDLGI---NSFWAKGESKEVKIS-------RLPPYKHNGELCRFPLFLKKENSSAMLLDV 239
N + + + V +S P E P L+ +++ L
Sbjct: 169 CGGSGNNPNCCMNQTKDQTVSLSPSLFNPEDFKPLDPTQEPIFPPELLRLKDTPQKKLRF 228
Query: 240 KG---SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYI 294
+G +W +++EL ++ + +KLV GNT +G + ++ + + +I
Sbjct: 229 EGERVTWIQASTMEELLDL-----KAQHPDAKLVVGNTEIGIEMKFKNMLFPLIVCPAWI 283
Query: 295 PELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRN 354
PEL+ + GI GA+ +S L EE + + VF+ + + A + +++
Sbjct: 284 PELNSVVHGPEGISFGASCPLSLVESVLAEEIAKLPEQKTEVFRGVMEQLRWFAGKQVKS 343
Query: 355 SASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSR 410
AS+GGN++ A SD+ V + +GA + +++ G + M F + L
Sbjct: 344 VASIGGNIITASPI---SDLNPVFMASGAKLTLVSRGTRRTVRMDHTFFPGYRKTLLRPE 400
Query: 411 SILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDG 470
ILLS+EIP + F ++ A R + + + + P
Sbjct: 401 EILLSIEIPY----------SKEGEFFSAFKQASR-REDDIAKVTSGMRVLFKP----GT 445
Query: 471 IRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRD--SVVPEDGTSIP 528
I V L FG + I A + K N +L L + + P+ +
Sbjct: 446 IEVQELSLCFGGMADR-TISALKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMV 504
Query: 529 AYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLL 588
+R +L + F ++F+ ++ + + + G + + + Q P +
Sbjct: 505 EFRRTLTLSFFFKFYLTVLQKLGRADLEDMAGKLDPTFASATLLFQKDP-------PANV 557
Query: 589 SSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARI 648
++V + E VG P+ A +QASGEA+Y DDIP N L + ST+ A+I
Sbjct: 558 QLFQEVPKDQSEEDMVGRPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKI 617
Query: 649 KGIEF-KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVA 707
I+ +++ VP V L+ +D+P N + +F E +FA + C G + VVA
Sbjct: 618 TSIDTSEAKKVPGFV-CFLTAEDVP----NSNATGLFNDETVFAKDEVTCVGHIIGAVVA 672
Query: 708 DSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEA 767
D+ ++ YE +L P I+++++A++ +S + + GD+ KG +EA
Sbjct: 673 DTPEHAQRAARGVKITYE--DL-PAIITIQDAINNNSFYGSEIKIEK---GDLKKGFSEA 726
Query: 768 DHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEH 826
D+ +++ E+ +G Q +FY+ET +AVP E + ++ S Q + +A+ LG+P++
Sbjct: 727 DN-VVSGELYIGGQEHFYLETNCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPDN 785
Query: 827 NVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKIT 886
+ V +R+GG FGGK ++ V+TA ALAA+K RPVR + R DM++ GGRHP
Sbjct: 786 RIVVRVKRMGGGFGGKETRSTVVSTALALAAHKTGRPVRCMLDRDEDMLITGGRHPFLAK 845
Query: 887 YSVGFKSNGKITALQLNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNL 945
Y VGF G + AL++ + G + D+S IM + Y + ++C+TNL
Sbjct: 846 YKVGFMKTGTVVALEVAHFSNGGNTEDLSRSIMERALFHMDNAYKIPNIRGTGRICKTNL 905
Query: 946 PSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAE 1005
PS +A R G QG IAE + VA T + + VR N++ L F + G
Sbjct: 906 PSNTAFRGFGGPQGMLIAEYWMSEVAITCGLPAEEVRRKNMYKEGDLTHFNQKLEG---- 961
Query: 1006 YTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKV 1060
+TLP WD+ SS + R +++FNR N W+K+G+C +P ++ L V
Sbjct: 962 FTLPRCWDECIASSQYLARKREVEKFNRENRWKKRGLCIIPTKFGISFTLPFLNQGGALV 1021
Query: 1061 SILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQ 1120
+ +DGSV++ GG EMGQGL TK+ Q+A+ AL K+ + + T +V
Sbjct: 1022 HVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPT--------SKIHISETSTNTVPN 1073
Query: 1121 GGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSA 1180
TA S +++ + Q V + C + + WE + A+ +V+LSA
Sbjct: 1074 TSPTAASASADLNGQGVYEACQ----TILKRLEPFKKKKPTGPWEAWVMDAYTSAVSLSA 1129
Query: 1181 SSMY-VPDF---------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPA 1230
+ Y P+ Y +YG A SEVE++ LTG+ +R+DI+ D G SLNPA
Sbjct: 1130 TGFYKTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPA 1189
Query: 1231 VDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHH 1290
+D+GQ+EGAFVQG+G F +EE + +G + + G TYKIP +IP +F V +L +
Sbjct: 1190 IDIGQVEGAFVQGLGLFTMEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPN 1249
Query: 1291 KKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVV 1350
K+ + +SKA GEPPL LA S+ A + AIR AR Q + + L+ PAT +
Sbjct: 1250 KRAIYASKAVGEPPLFLASSIFFAIKDAIRAARAQ-----HGDNAKQLFQLDSPATPEKI 1304
Query: 1351 KELC 1354
+ C
Sbjct: 1305 RNAC 1308
>pdb|3ZYV|A Chain A, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|B Chain B, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|C Chain C, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|D Chain D, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
Length = 1335
Score = 507 bits (1305), Expect = e-143, Method: Compositional matrix adjust.
Identities = 409/1396 (29%), Positives = 672/1396 (48%), Gaps = 149/1396 (10%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPELDQL 73
++F VNG+K + DP LL +LR R S+Y+P ++
Sbjct: 10 LIFFVNGKKVTERNADPEVNLLFYLRKVIRLTGTKYGCGGGDCGACTVMISRYDPISKRI 69
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLF 133
F+ ++CL +CS++G +TT EG+G++KT HP+ +R A H +QCGFCTPGM MS++
Sbjct: 70 SHFSATACLVPICSLHGAAVTTVEGIGSTKTRIHPVQERIAKGHGTQCGFCTPGMVMSIY 129
Query: 134 SALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDLG 193
+ L + PEP + + + + GNLCRCTGYRPI ++ KSF +
Sbjct: 130 TLL-----RNHPEP-------STEQIMETLGGNLCRCTGYRPIVESAKSFCPSSTCCQMN 177
Query: 194 ------INSFWAKGESKEVKISRL------PPYKHNGELCRFPLFLK-KENSSAMLLDVK 240
++ + E K ++L P EL P ++ E S +L +
Sbjct: 178 GEGKCCLDEEKNEPERKNSVCTKLYEKKEFQPLDPTQELIFPPELMRMAEESQNTVLTFR 237
Query: 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRY------- 293
G + I+ L ++LE S+ LV GNT +G + K+ D+ Y
Sbjct: 238 GERTTWIAPGTLNDLLEL--KMKHPSAPLVIGNTYLGLHM------KFTDVSYPIIISPA 289
Query: 294 -IPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFI 352
I EL V+ + G+ +G +++++ L + E ++ + ++ +A + I
Sbjct: 290 RILELFVVTNTKQGLTLGTGLSLTQVKNVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQI 349
Query: 353 RNSASVGGNLVMAQRKHFPSDVATVLLGAG-AMVNIMTGQKCEKLML-EEFLERPP---L 407
RN AS+GG+++ P+ +LG G ++N+ + + +++ L + FL P L
Sbjct: 350 RNVASLGGHII----SRLPTSDLNPILGIGNCILNVASTEGIQQIPLNDHFLAGVPDAIL 405
Query: 408 DSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKT 467
+L+SV +P ++ +R APR NA +NA
Sbjct: 406 KPEQVLISVFVP----------RSSKWEFVSAFRQAPRQ-QNAFATVNAGMKVVFKE--- 451
Query: 468 GDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRD--SVVPEDGT 525
D + + + +G G I A + L G+ + +L +A K++ + S++
Sbjct: 452 -DTNTITDLGILYGGIGAT-VISADKSCRQLIGRCWDEEMLDDAGKMICEEVSLLMAAPG 509
Query: 526 SIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVP 585
+ YR +LA+ FL+ F+ L +K +RD ++S K H+ ++ +P
Sbjct: 510 GMEEYRKTLAISFLFMFY--LDVLKQLKTRD--PHKYPDISQKLLHILEDFPL----TMP 561
Query: 586 TLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPL 645
+ S + V P+G PI A+GEA++ DD+ L+ A + S+K
Sbjct: 562 YGMQSFQDVDFQQPLQDPIGRPIMHQSGIKHATGEAVFCDDMSVLPGELFLAVVTSSKSH 621
Query: 646 ARIKGIE----FKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQP 701
A+I ++ S V DVVTA +D+P G N G + E L+A + C GQ
Sbjct: 622 AKIISLDASEALASLGVVDVVTA----RDVP--GDN-GRE----EESLYAQDEVICVGQI 670
Query: 702 VAFVVADSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPK---PVG 758
V V ADS + Y+ ++EP I++V++A+ + SF+ P+ G
Sbjct: 671 VCAVAADSYAHAQQAAKKVKIVYQ--DIEPMIVTVQDAL------QYESFIGPERKLEQG 722
Query: 759 DISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATI 817
++ + AD +IL E+ LG Q +FYMETQ+ VP ED + +Y S Q +
Sbjct: 723 NVEEAFQCAD-QILEGEVHLGGQEHFYMETQSVRVVPKGEDKEMDIYVSSQDAAFTQEMV 781
Query: 818 ARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMV 877
AR LGIP++ + +RVGGAFGGKA K +A+ A+AA K RP+R ++R+ DM++
Sbjct: 782 ARTLGIPKNRINCHVKRVGGAFGGKASKPGLLASVAAVAAQKTGRPIRFILERRDDMLIT 841
Query: 878 GGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGALKK-YDWGALHF 936
GGRHP+ Y +GF +NGKI A + + I+ G +PD S ++ + L+ Y L
Sbjct: 842 GGRHPLLGKYKIGFMNNGKIKAADIQLYINGGCTPDDSELVIEYALLKLENAYKIPNLRV 901
Query: 937 DIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFY 996
+VC+TNLPS +A R G QG+F+ E + VA+ + + VR +N++ +
Sbjct: 902 RGRVCKTNLPSNTAFRGFGFPQGAFVTETCMSAVAAKCRLPPEKVRELNMYRTIDRTIHN 961
Query: 997 ESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRST 1056
+ E+ L W+ +SS+ R + + EFN+ W+K+G+ +P+ V T
Sbjct: 962 Q----EFDPTNLLQCWEACVENSSYYNRKKAVDEFNQQRFWKKRGIAIIPMKFSVGFPKT 1017
Query: 1057 -----PGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVV 1111
V I +DGSV+V GG+E+GQG+ TK+ Q+A+ L + + +
Sbjct: 1018 FYYQAAALVQIYTDGSVLVAHGGVELGQGINTKMIQVASRELKIP--------MSYIHLD 1069
Query: 1112 QADTLSVIQGGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQA 1171
+ T++V T ST ++ + + V++ C I Q + WE +++A
Sbjct: 1070 EMSTVTVPNTVTTGASTGADVNGRAVQNACQILMKRLEPIIK----QNPSGTWEEWVKEA 1125
Query: 1172 HLQSVNLSASSM---YVPDFTSVQ-------YLNYGAAVSEVEVNLLTGETTIVRSDIIY 1221
+QS++LSA+ Y D + Y +GAA SEVE++ LTG +R+DI+
Sbjct: 1126 FVQSISLSATGYFRGYQADMDWEKGEGDIFPYFVFGAACSEVEIDCLTGAHKNIRTDIVM 1185
Query: 1222 DCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFN 1281
D S+NPAVD+GQIEGAFVQG+G + LEE + +G++ + G YKI ++ IP++F+
Sbjct: 1186 DGSFSINPAVDIGQIEGAFVQGLGLYTLEELKYSPEGVLYTRGPHQYKIASVTDIPEEFH 1245
Query: 1282 VEILNSGHHKKRVLSSKASGEPPLLLAVS---VHCATRAAIREARKQLLSWSQLNGSDFT 1338
V +L + K + SSK GE L S A AA RE R W+
Sbjct: 1246 VSLLTPTPNPKAIYSSKGLGEAGTFLGCSVFFAIAAAVAAAREERGLSPIWA-------- 1297
Query: 1339 VNLEVPATMPVVKELC 1354
+ PAT V++ C
Sbjct: 1298 --INSPATAEVIRMAC 1311
>pdb|3SR6|C Chain C, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|L Chain L, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 745
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 265/769 (34%), Positives = 404/769 (52%), Gaps = 50/769 (6%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
VG P+ AA+QASGEA+Y DDIP N L+ + ST+ A+IK I+ +++ VP V
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXX 722
LS DIP G G +F E +FA + C G + VVAD+ ++
Sbjct: 63 -CFLSADDIP-GSNETG---LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKV 117
Query: 723 XYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQY 782
YE +L P I+++E+A+ +S + + GD+ KG +EAD+ +++ E+ +G Q
Sbjct: 118 TYE--DL-PAIITIEDAIKNNSFYGSELKIEK---GDLKKGFSEADN-VVSGELYIGGQD 170
Query: 783 YFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
+FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GG FGG
Sbjct: 171 HFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGG 230
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K ++ V+ A ALAAYK PVR + R DM++ GGRHP Y VGF G I AL+
Sbjct: 231 KETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALE 290
Query: 902 LNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGS 960
++ +AG S D+S IM + Y + ++C+TNL S +A R G Q
Sbjct: 291 VDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQAL 350
Query: 961 FIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSS 1020
FIAE + VA T + + VR N++ L F + G +++P WD+ SS
Sbjct: 351 FIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSVPRCWDECLKSSQ 406
Query: 1021 FNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKVSILSDGSVVVEVGGI 1075
+ R + +FN+ N W+K+G+C +P ++ L + + +DGSV+V GG
Sbjct: 407 YYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGT 466
Query: 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQ 1135
EMGQGL TK+ Q+A+ AL + K+ + + T +V TA S +++ Q
Sbjct: 467 EMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQ 518
Query: 1136 VVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSMY-VPDF------ 1188
V + C + + + WE + A+ V+LS + Y P+
Sbjct: 519 AVYEACQ----TILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFET 574
Query: 1189 ---TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIG 1245
+ Y YG A SEVE++ LTG+ +R+DI+ D G SLNPA+D+GQ+EGAFVQG+G
Sbjct: 575 NSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLG 634
Query: 1246 FFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPL 1305
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 635 LFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPL 694
Query: 1306 LLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELC 1354
L SV A + AIR AR Q + N + L+ PAT ++ C
Sbjct: 695 FLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNAC 739
>pdb|3EUB|C Chain C, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
pdb|3EUB|L Chain L, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
pdb|3EUB|U Chain U, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
pdb|3EUB|4 Chain 4, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
Length = 762
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 265/769 (34%), Positives = 404/769 (52%), Gaps = 50/769 (6%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
VG P+ AA+QASGEA+Y DDIP N L+ + ST+ A+IK I+ +++ VP V
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXX 722
LS DIP G G +F E +FA + C G + VVAD+ ++
Sbjct: 63 -CFLSADDIP-GSNETG---LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKV 117
Query: 723 XYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQY 782
YE +L P I+++E+A+ +S + + GD+ KG +EAD+ +++ E+ +G Q
Sbjct: 118 TYE--DL-PAIITIEDAIKNNSFYGSELKIEK---GDLKKGFSEADN-VVSGELYIGGQD 170
Query: 783 YFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
+FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GG FGG
Sbjct: 171 HFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGG 230
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K ++ V+ A ALAAYK PVR + R DM++ GGRHP Y VGF G I AL+
Sbjct: 231 KETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALE 290
Query: 902 LNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGS 960
++ +AG S D+S IM + Y + ++C+TNL S +A R G Q
Sbjct: 291 VDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQAL 350
Query: 961 FIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSS 1020
FIAE + VA T + + VR N++ L F + G +++P WD+ SS
Sbjct: 351 FIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSVPRCWDECLKSSQ 406
Query: 1021 FNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKVSILSDGSVVVEVGGI 1075
+ R + +FN+ N W+K+G+C +P ++ L + + +DGSV+V GG
Sbjct: 407 YYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGT 466
Query: 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQ 1135
EMGQGL TK+ Q+A+ AL + K+ + + T +V TA S +++ Q
Sbjct: 467 EMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQ 518
Query: 1136 VVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSMY-VPDF------ 1188
V + C + + + WE + A+ V+LS + Y P+
Sbjct: 519 AVYEACQ----TILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFET 574
Query: 1189 ---TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIG 1245
+ Y YG A SEVE++ LTG+ +R+DI+ D G SLNPA+D+GQ+EGAFVQG+G
Sbjct: 575 NSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLG 634
Query: 1246 FFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPL 1305
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 635 LFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPL 694
Query: 1306 LLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELC 1354
L SV A + AIR AR Q + N + L+ PAT ++ C
Sbjct: 695 FLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNAC 739
>pdb|1FIQ|C Chain C, Crystal Structure Of Xanthine Oxidase From Bovine Milk
pdb|3B9J|C Chain C, Structure Of Xanthine Oxidase With 2-Hydroxy-6-Methylpurine
pdb|3B9J|K Chain K, Structure Of Xanthine Oxidase With 2-Hydroxy-6-Methylpurine
Length = 763
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 265/769 (34%), Positives = 404/769 (52%), Gaps = 50/769 (6%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
VG P+ AA+QASGEA+Y DDIP N L+ + ST+ A+IK I+ +++ VP V
Sbjct: 4 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 63
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXX 722
LS DIP G G +F E +FA + C G + VVAD+ ++
Sbjct: 64 -CFLSADDIP-GSNETG---LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKV 118
Query: 723 XYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQY 782
YE +L P I+++E+A+ +S + + GD+ KG +EAD+ +++ E+ +G Q
Sbjct: 119 TYE--DL-PAIITIEDAIKNNSFYGSELKIEK---GDLKKGFSEADN-VVSGELYIGGQD 171
Query: 783 YFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
+FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GG FGG
Sbjct: 172 HFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGG 231
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K ++ V+ A ALAAYK PVR + R DM++ GGRHP Y VGF G I AL+
Sbjct: 232 KETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALE 291
Query: 902 LNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGS 960
++ +AG S D+S IM + Y + ++C+TNL S +A R G Q
Sbjct: 292 VDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQAL 351
Query: 961 FIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSS 1020
FIAE + VA T + + VR N++ L F + G +++P WD+ SS
Sbjct: 352 FIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSVPRCWDECLKSSQ 407
Query: 1021 FNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKVSILSDGSVVVEVGGI 1075
+ R + +FN+ N W+K+G+C +P ++ L + + +DGSV+V GG
Sbjct: 408 YYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGT 467
Query: 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQ 1135
EMGQGL TK+ Q+A+ AL + K+ + + T +V TA S +++ Q
Sbjct: 468 EMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQ 519
Query: 1136 VVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSMY-VPDF------ 1188
V + C + + + WE + A+ V+LS + Y P+
Sbjct: 520 AVYEACQ----TILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFET 575
Query: 1189 ---TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIG 1245
+ Y YG A SEVE++ LTG+ +R+DI+ D G SLNPA+D+GQ+EGAFVQG+G
Sbjct: 576 NSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLG 635
Query: 1246 FFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPL 1305
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 636 LFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPL 695
Query: 1306 LLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELC 1354
L SV A + AIR AR Q + N + L+ PAT ++ C
Sbjct: 696 FLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNAC 740
>pdb|3NRZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Hypoxanthine
pdb|3NRZ|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Hypoxanthine
pdb|3NVW|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Guanine
pdb|3NVW|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Guanine
pdb|3NVY|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Quercetin
pdb|3NVY|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Quercetin
Length = 756
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 265/769 (34%), Positives = 404/769 (52%), Gaps = 50/769 (6%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
VG P+ AA+QASGEA+Y DDIP N L+ + ST+ A+IK I+ +++ VP V
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXX 722
LS DIP G G +F E +FA + C G + VVAD+ ++
Sbjct: 63 -CFLSADDIP-GSNETG---LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKV 117
Query: 723 XYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQY 782
YE +L P I+++E+A+ +S + + GD+ KG +EAD+ +++ E+ +G Q
Sbjct: 118 TYE--DL-PAIITIEDAIKNNSFYGSELKIEK---GDLKKGFSEADN-VVSGELYIGGQD 170
Query: 783 YFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
+FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GG FGG
Sbjct: 171 HFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGG 230
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K ++ V+ A ALAAYK PVR + R DM++ GGRHP Y VGF G I AL+
Sbjct: 231 KETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALE 290
Query: 902 LNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGS 960
++ +AG S D+S IM + Y + ++C+TNL S +A R G Q
Sbjct: 291 VDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQAL 350
Query: 961 FIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSS 1020
FIAE + VA T + + VR N++ L F + G +++P WD+ SS
Sbjct: 351 FIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSVPRCWDECLKSSQ 406
Query: 1021 FNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKVSILSDGSVVVEVGGI 1075
+ R + +FN+ N W+K+G+C +P ++ L + + +DGSV+V GG
Sbjct: 407 YYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGT 466
Query: 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQ 1135
EMGQGL TK+ Q+A+ AL + K+ + + T +V TA S +++ Q
Sbjct: 467 EMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQ 518
Query: 1136 VVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSMY-VPDF------ 1188
V + C + + + WE + A+ V+LS + Y P+
Sbjct: 519 AVYEACQ----TILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFET 574
Query: 1189 ---TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIG 1245
+ Y YG A SEVE++ LTG+ +R+DI+ D G SLNPA+D+GQ+EGAFVQG+G
Sbjct: 575 NSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLG 634
Query: 1246 FFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPL 1305
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 635 LFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPL 694
Query: 1306 LLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELC 1354
L SV A + AIR AR Q + N + L+ PAT ++ C
Sbjct: 695 FLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNAC 739
>pdb|3ETR|C Chain C, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|N Chain N, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3NS1|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
6- Mercaptopurine
pdb|3NS1|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
6- Mercaptopurine
pdb|3NVV|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Arsenite
pdb|3NVV|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Arsenite
pdb|3NVZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Indole-3- Aldehyde
pdb|3NVZ|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Indole-3- Aldehyde
Length = 755
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 265/769 (34%), Positives = 404/769 (52%), Gaps = 50/769 (6%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVV 662
VG P+ AA+QASGEA+Y DDIP N L+ + ST+ A+IK I+ +++ VP V
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 663 TALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXX 722
LS DIP G G +F E +FA + C G + VVAD+ ++
Sbjct: 63 -CFLSADDIP-GSNETG---LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKV 117
Query: 723 XYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQY 782
YE +L P I+++E+A+ +S + + GD+ KG +EAD+ +++ E+ +G Q
Sbjct: 118 TYE--DL-PAIITIEDAIKNNSFYGSELKIEK---GDLKKGFSEADN-VVSGELYIGGQD 170
Query: 783 YFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGG 841
+FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GG FGG
Sbjct: 171 HFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGG 230
Query: 842 KAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQ 901
K ++ V+ A ALAAYK PVR + R DM++ GGRHP Y VGF G I AL+
Sbjct: 231 KETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALE 290
Query: 902 LNILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGS 960
++ +AG S D+S IM + Y + ++C+TNL S +A R G Q
Sbjct: 291 VDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQAL 350
Query: 961 FIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSS 1020
FIAE + VA T + + VR N++ L F + G +++P WD+ SS
Sbjct: 351 FIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSVPRCWDECLKSSQ 406
Query: 1021 FNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPGKVSILSDGSVVVEVGGI 1075
+ R + +FN+ N W+K+G+C +P ++ L + + +DGSV+V GG
Sbjct: 407 YYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGT 466
Query: 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQ 1135
EMGQGL TK+ Q+A+ AL + K+ + + T +V TA S +++ Q
Sbjct: 467 EMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQ 518
Query: 1136 VVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSMY-VPDF------ 1188
V + C + + + WE + A+ V+LS + Y P+
Sbjct: 519 AVYEACQ----TILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFET 574
Query: 1189 ---TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIG 1245
+ Y YG A SEVE++ LTG+ +R+DI+ D G SLNPA+D+GQ+EGAFVQG+G
Sbjct: 575 NSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLG 634
Query: 1246 FFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPL 1305
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 635 LFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPL 694
Query: 1306 LLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELC 1354
L SV A + AIR AR Q + N + L+ PAT ++ C
Sbjct: 695 FLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNAC 739
>pdb|1JRO|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRO|D Chain D, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRO|F Chain F, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRO|H Chain H, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRP|B Chain B, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|D Chain D, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|F Chain F, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|H Chain H, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|2W3R|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3S|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W54|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|D Chain D, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|F Chain F, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|H Chain H, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
Length = 777
Score = 302 bits (774), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 233/761 (30%), Positives = 355/761 (46%), Gaps = 71/761 (9%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVT 663
VG+P+ A +G+A Y+DD+P P N L+ AF ST+ A I G++ + V
Sbjct: 3 VGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVI 62
Query: 664 ALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXXX 723
A+ + D+P + + EP+ A GQP+ V A S +
Sbjct: 63 AVFTAADLPHDNDASPAPS---PEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARIT 119
Query: 724 YEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYY 783
Y P IL++++A+ S FE ++ + GD+ + A H + ++G Q +
Sbjct: 120 YAP---RPAILTLDQALAADSRFEGGPVIWAR--GDVETALAGAAH-LAEGCFEIGGQEH 173
Query: 784 FYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKA 843
FY+E Q ALA+P E +V++ S Q P +A LG+ H+VRV RR+GG FGGK
Sbjct: 174 FYLEGQAALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKE 232
Query: 844 IKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLN 903
+ +A ACA+AA RP ++ R DM++ G RH +I Y +G ++GK+
Sbjct: 233 SQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFV 292
Query: 904 ILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFI 962
L G S D+S P+ M+ A Y AL + RTN S +A R G QG+
Sbjct: 293 HLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALG 352
Query: 963 AEAVIEHVASTLSMEVDFVRNINLH-------------------THKSLNLFYESSAGEY 1003
E IEH+A + + +R +N + T K+ Y E
Sbjct: 353 MERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQ---EV 409
Query: 1004 AEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPG 1058
A+ L + +L S++F R I +N +N +G+ P+ ++ L
Sbjct: 410 ADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGA 469
Query: 1059 KVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSV 1118
V I +DGSV + GG EMGQGL K+ Q+AA L G +VR+ DT V
Sbjct: 470 LVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVL--------GIDPVQVRITATDTSKV 521
Query: 1119 IQGGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQG-------------QMGNVEWE 1165
TA S+ ++ + V+D C +G Q W
Sbjct: 522 PNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWR 581
Query: 1166 --TLIQQAHLQSVNLSASSMYVPDFTSVQ----------YLNYGAAVSEVEVNLLTGETT 1213
++ A++ ++LSA+ Y S Y YGAA++EV ++ LTGE
Sbjct: 582 FAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENR 641
Query: 1214 IVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTL 1273
I+R+DI++D G SLNPA+D+GQIEGA+VQG G+ EE + G +++ TYKIP
Sbjct: 642 ILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAF 701
Query: 1274 DTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCA 1314
P+ FNV + + + ++ + SKA GEPP LL +S A
Sbjct: 702 SDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLA 742
>pdb|2W55|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W55|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W55|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W55|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
Length = 777
Score = 302 bits (773), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 233/761 (30%), Positives = 355/761 (46%), Gaps = 71/761 (9%)
Query: 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVT 663
VG+P+ A +G+A Y+DD+P P N L+ AF ST+ A I G++ + V
Sbjct: 3 VGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVI 62
Query: 664 ALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXXX 723
A+ + D+P + + EP+ A GQP+ V A S +
Sbjct: 63 AVFTAADLPHDNDASPAPS---PEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARIT 119
Query: 724 YEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYY 783
Y P IL++++A+ S FE ++ + GD+ + A H + ++G Q +
Sbjct: 120 YAP---RPAILTLDQALAADSRFEGGPVIWAR--GDVETALAGAAH-LAEGCFEIGGQEH 173
Query: 784 FYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKA 843
FY+E Q ALA+P E +V++ S Q P +A LG+ H+VRV RR+GG FGGK
Sbjct: 174 FYLEGQAALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKQ 232
Query: 844 IKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLN 903
+ +A ACA+AA RP ++ R DM++ G RH +I Y +G ++GK+
Sbjct: 233 SQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFV 292
Query: 904 ILIDAGLSPDVS-PIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFI 962
L G S D+S P+ M+ A Y AL + RTN S +A R G QG+
Sbjct: 293 HLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALG 352
Query: 963 AEAVIEHVASTLSMEVDFVRNINLH-------------------THKSLNLFYESSAGEY 1003
E IEH+A + + +R +N + T K+ Y E
Sbjct: 353 MERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQ---EV 409
Query: 1004 AEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT-----LRSTPG 1058
A+ L + +L S++F R I +N +N +G+ P+ ++ L
Sbjct: 410 ADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGA 469
Query: 1059 KVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSV 1118
V I +DGSV + GG EMGQGL K+ Q+AA L G +VR+ DT V
Sbjct: 470 LVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVL--------GIDPVQVRITATDTSKV 521
Query: 1119 IQGGFTAGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQG-------------QMGNVEWE 1165
TA S+ ++ + V+D C +G Q W
Sbjct: 522 PNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWR 581
Query: 1166 --TLIQQAHLQSVNLSASSMYVPDFTSVQ----------YLNYGAAVSEVEVNLLTGETT 1213
++ A++ ++LSA+ Y S Y YGAA++EV ++ LTGE
Sbjct: 582 FAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENR 641
Query: 1214 IVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTL 1273
I+R+DI++D G SLNPA+D+GQIEGA+VQG G+ EE + G +++ TYKIP
Sbjct: 642 ILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIPAF 701
Query: 1274 DTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCA 1314
P+ FNV + + + ++ + SKA GEPP LL +S A
Sbjct: 702 SDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLA 742
>pdb|3EUB|A Chain A, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|J Chain J, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|S Chain S, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|2 Chain 2, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
Length = 165
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPE 69
T +VF VNG+K + DP TTLL +LR + SKY+
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRL 61
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
D++ F+ ++CL +C+++ +TT EG+G++KT HP+ +R A H SQCGFCTPG+
Sbjct: 62 QDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIV 121
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 184
MS+++ L + +PEP T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 122 MSMYTLLRN-----QPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 164
>pdb|1FIQ|A Chain A, Crystal Structure Of Xanthine Oxidase From Bovine Milk
pdb|3B9J|A Chain A, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
pdb|3B9J|I Chain I, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
Length = 219
Score = 133 bits (334), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPE 69
T +VF VNG+K + DP TTLL +LR + SKY+
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRL 61
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
D++ F+ ++CL +C+++ +TT EG+G++KT HP+ +R A H SQCGFCTPG+
Sbjct: 62 QDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIV 121
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 184
MS+++ L + +PEP T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 122 MSMYTLLRN-----QPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 164
>pdb|3ETR|A Chain A, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|L Chain L, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3NRZ|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NRZ|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NS1|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NS1|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NVV|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVV|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVW|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVW|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVY|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVY|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVZ|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3NVZ|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3SR6|A Chain A, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|J Chain J, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 164
Score = 133 bits (334), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPE 69
T +VF VNG+K + DP TTLL +LR + SKY+
Sbjct: 1 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRL 60
Query: 70 LDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMC 129
D++ F+ ++CL +C+++ +TT EG+G++KT HP+ +R A H SQCGFCTPG+
Sbjct: 61 QDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIV 120
Query: 130 MSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 184
MS+++ L + +PEP T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 121 MSMYTLLRN-----QPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 163
>pdb|3HRD|A Chain A, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|E Chain E, Crystal Structure Of Nicotinate Dehydrogenase
Length = 425
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 159/400 (39%), Gaps = 23/400 (5%)
Query: 597 LSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSE 656
+ ++Y +G+ K + + G A + D P + LY ST P ARI ++
Sbjct: 1 MGKDYQVLGKNKVKVDSLEKVMGTAKFAADYSFP-DMLYAGVFRSTVPHARIVSLDLSKA 59
Query: 657 SVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXX 716
D V A+L Y IP G G I EP D+ R G +A V A +
Sbjct: 60 RAIDGVEAVLDYHAIP-GKNRFG--IIIKDEPCLVDDKVRRYGDAIAVVAAQTPDLVQEA 116
Query: 717 XXXXXXXYEMGNLEPPILSVEEAVDRSS--------LFEVPSFLYPKPVGDISKGMNEAD 768
YE LE I ++E A++ S + +V Y GD+ + D
Sbjct: 117 LDAITIEYE--ELEG-IFTMERALEEDSPAIHGDTNIHQVKHLEY----GDVDAAFKQCD 169
Query: 769 HRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNV 828
++ + ++E ++ D + L V S Q P +A L +P V
Sbjct: 170 -IVVEDTYSTHRLTHMFIEPDAGVSYYDNEGMLTVVVSTQNPHYDRGEVAGMLALPNSKV 228
Query: 829 RVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYS 888
R+I GG FGGK + V CAL Y +PV++ R+ + RHPM +
Sbjct: 229 RIIQATTGGGFGGKL--DLSVQCHCALLTYHTKKPVKMVRSREESTTVSSKRHPMTMHCK 286
Query: 889 VGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPS 947
G +G++ A+Q+ + D G P ++ + + Y + D K TN P
Sbjct: 287 TGATKDGRLQAVQVEMFGDTGAYASYGPAVITRATVHCMGPYVVPNVRVDAKFVYTNNPM 346
Query: 948 RSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLH 987
A R G Q S E + +A L M+ +R +N H
Sbjct: 347 SGAFRGFGVPQASVCHEGQMNALAKALGMDPIDIRILNAH 386
>pdb|1RM6|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1RM6|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
Length = 769
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 165/722 (22%), Positives = 283/722 (39%), Gaps = 88/722 (12%)
Query: 616 QASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGG 675
+ +G+A Y DI +P + L G + S ARI I+ + + V A+ + + P
Sbjct: 23 KVTGKAKYTADIAAP-DALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETP--- 78
Query: 676 QNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXXXYEM--------G 727
G I +E A + R G PVA V A + YE+
Sbjct: 79 VPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYEVLPAYMTPKA 138
Query: 728 NLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYME 787
++ +++ + + L EV + GD++ EAD I + +ME
Sbjct: 139 AMKAGAIALHDDKPNNILREVHAEF-----GDVAAAFAEAD-LIREKTYTFAEVNHVHME 192
Query: 788 TQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKA 846
LA D + L + ++ Q P H +A CL + +RVI +GG FG + +A
Sbjct: 193 LNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGART-EA 251
Query: 847 MPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILI 906
+ L A K VR+ R+ I GR ++ +G K +GKI AL L
Sbjct: 252 LHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALE-AT 310
Query: 907 DAGLSPDVSPIMPSNMIGALKK--YDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAE 964
AG + I+ GAL Y A+ D TN P AMR G V E
Sbjct: 311 QAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFE 370
Query: 965 AVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQR 1024
A++ + L ++ +R IN+ Y A Y +P +K+ +S + +R
Sbjct: 371 ALLTEMGEELGIDSLKIRQINMLPQIPYVTMY---AQRVMSYGVPECLEKVKAASGWEER 427
Query: 1025 TEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPG----------KVSILSDGSVVVEVGG 1074
+ L + +G+ + + H V+ STP + + DG + + G
Sbjct: 428 --------KGKLPKGRGLG-IALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGA 478
Query: 1075 IEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQ--GGFTAGST--TS 1130
++GQG T Q+AA L G L ++RV+ AD+ + G +++ T
Sbjct: 479 ADIGQGSNTMASQVAAEVL--------GVRLSRIRVISADSALTPKDNGSYSSRVTFMVG 530
Query: 1131 EASCQVVRDCCNIXXXXXXXXXXXXQ--------------GQMGNVEWETLIQQAHLQSV 1176
AS + + + Q + ++ +++ A + S
Sbjct: 531 NASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSG 590
Query: 1177 NLSASSMYV--PDFTSVQYLN-----------YGAAVSEVEVNLLTGETTIVRSDIIYDC 1223
++ Y +F + + Y A V E V+ +TG+ T + + D
Sbjct: 591 TITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDV 650
Query: 1224 GQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVE 1283
G++LNP GQ +G G+G + EE + +G +V Y++PT+ P ++E
Sbjct: 651 GKALNPLAVEGQTQGGVWMGMGQALSEETVYD-NGRMVHGNILDYRVPTIVESP---DIE 706
Query: 1284 IL 1285
++
Sbjct: 707 VI 708
>pdb|2W3R|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3S|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W54|A Chain A, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|C Chain C, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|E Chain E, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|G Chain G, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W55|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
Length = 462
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 131/549 (23%), Positives = 210/549 (38%), Gaps = 117/549 (21%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPELDQL 73
+ F +NGE V DP+ +LLE+LR + D
Sbjct: 3 IAFLLNGETRRVRIEDPTQSLLEWLRAEGLTGTKEGCNEGDCGACTVMIR-------DAA 55
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLF 133
+++CL +L + G + T EG+ HP+ Q H SQCGFCTPG +S+
Sbjct: 56 GSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMA 115
Query: 134 SALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDLG 193
+A K + + +AGNLCRCTGY PI A ++ A + + L
Sbjct: 116 AAHDRDRKDY----------------DDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQ 159
Query: 194 INSFWAKGE-SKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPISVQEL 252
++ + + S V+ G+ P FL + + D W+
Sbjct: 160 ADAAFTLAQLSSGVR----------GQTA--PAFLPETS------DALADWY-------- 193
Query: 253 RNVLESVEGSNQISSKLVAGNTGMGYY--KEVEHYDKYIDIRYIPELSVIRRDQTGIEIG 310
L E + L+AG T + + K + + + + +L+ IR G IG
Sbjct: 194 ---LAHPEAT------LIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIG 244
Query: 311 ATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHF 370
A VTI+ A+ A E +AG + + AS +R A++GGN+
Sbjct: 245 AGVTIA-ALRAFAEGPH----------PALAGLLRRFASEQVRQVATIGGNIANGSPI-- 291
Query: 371 PSDVATVLLGAGAMVNIMTGQKCEKLMLEE-FLERPPLDSR--SILLSVEIP-------C 420
D L+ GA + + GQ+ ++ LE+ FLE D R + SV +P C
Sbjct: 292 -GDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPGLRC 350
Query: 421 WDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAF 480
+ L++ + ++V LN T G ++ R+AF
Sbjct: 351 YKLSKRFDQDISAV----------------CGCLNL----------TLKGSKIETARIAF 384
Query: 481 GAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVP-EDGTSIPAYR----SSLA 535
G RA E L G+ + A+ LL P D + AYR ++A
Sbjct: 385 GGMAGVPK-RAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMA 443
Query: 536 VGFLYEFFG 544
+ ++ E G
Sbjct: 444 LRYVRELSG 452
>pdb|1JRO|A Chain A, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|C Chain C, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|E Chain E, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|G Chain G, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRP|A Chain A, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|C Chain C, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|E Chain E, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|G Chain G, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
Length = 462
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 131/549 (23%), Positives = 209/549 (38%), Gaps = 117/549 (21%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPELDQL 73
+ F +NGE V DP+ +LLE LR + D
Sbjct: 3 IAFLLNGETRRVRIEDPTQSLLELLRAEGLTGTKEGCNEGDCGACTVMIR-------DAA 55
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLF 133
+++CL +L + G + T EG+ HP+ Q H SQCGFCTPG +S+
Sbjct: 56 GSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMA 115
Query: 134 SALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVDIEDLG 193
+A K + + +AGNLCRCTGY PI A ++ A + + L
Sbjct: 116 AAHDRDRKDY----------------DDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQ 159
Query: 194 INSFWAKGE-SKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPISVQEL 252
++ + + S V+ G+ P FL + + D W+
Sbjct: 160 ADAAFTLAQLSSGVR----------GQTA--PAFLPETS------DALADWY-------- 193
Query: 253 RNVLESVEGSNQISSKLVAGNTGMGYY--KEVEHYDKYIDIRYIPELSVIRRDQTGIEIG 310
L E + L+AG T + + K + + + + +L+ IR G IG
Sbjct: 194 ---LAHPEAT------LIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIG 244
Query: 311 ATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHF 370
A VTI+ A+ A E +AG + + AS +R A++GGN+
Sbjct: 245 AGVTIA-ALRAFAEGPH----------PALAGLLRRFASEQVRQVATIGGNIANGSPI-- 291
Query: 371 PSDVATVLLGAGAMVNIMTGQKCEKLMLEE-FLERPPLDSR--SILLSVEIP-------C 420
D L+ GA + + GQ+ ++ LE+ FLE D R + SV +P C
Sbjct: 292 -GDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPGLRC 350
Query: 421 WDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAF 480
+ L++ + ++V LN T G ++ R+AF
Sbjct: 351 YKLSKRFDQDISAV----------------CGCLNL----------TLKGSKIETARIAF 384
Query: 481 GAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVP-EDGTSIPAYR----SSLA 535
G RA E L G+ + A+ LL P D + AYR ++A
Sbjct: 385 GGMAGVPK-RAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMA 443
Query: 536 VGFLYEFFG 544
+ ++ E G
Sbjct: 444 LRYVRELSG 452
>pdb|1ZXI|B Chain B, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
pdb|1ZXI|E Chain E, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
Length = 809
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 166/757 (21%), Positives = 284/757 (37%), Gaps = 98/757 (12%)
Query: 619 GEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVVTALLSYKDIPEGGQN 677
G+ YVDD+ P L+G F+ S+ ARIK I+ K++++P V A+L+ D+ +
Sbjct: 36 GKGNYVDDVKLP-GMLFGDFVRSSHAHARIKSIDTSKAKALPGVF-AVLTAADLKPLNLH 93
Query: 678 IGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXXXYE--------MGNL 729
+ + ADE Q VAFVVA + YE +
Sbjct: 94 YMPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVLVDPFKAM 153
Query: 730 EP--PILSVEEAVDRSS----LFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYY 783
EP P+L E+ D+ + + + ++ +GD D AE+ +
Sbjct: 154 EPDAPLLR-EDIKDKMTGAHGARKHHNHIFRWEIGD----KEGTDATFAKAEVVSKDMFT 208
Query: 784 FY------METQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVG 836
++ +ET +A D+ L ++ + Q P ++ G+PEH + VI +G
Sbjct: 209 YHRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDIG 268
Query: 837 GAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGK 896
G FG K + A +A+ L PV+ R ++ +T + +GK
Sbjct: 269 GGFGNK-VGAYSGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGK 327
Query: 897 ITALQLNILIDAG---LSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPS-----R 948
I A++ ++L D G D S M YD H + TN S R
Sbjct: 328 ILAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYR 387
Query: 949 SAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAG-EYAEYT 1007
+ R + + E IE +A L M+ +R N + Y + G EY
Sbjct: 388 CSFRV---TEAVYAIERAIETLAQRLEMDSADLRIKNFIQPEQFP--YMAPLGWEYDSGN 442
Query: 1008 LPLIWDKLAVSSSFNQ-RTEMIKE---FNRSNLWRKKGVCRLPIVHEVTLRSTPGK---- 1059
PL K + ++Q R E + F R G+ + E+ + + P K
Sbjct: 443 YPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIG-ISFFTEI-VGAGPSKNCDI 500
Query: 1060 ----------VSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVR 1109
+ I GSV+ +G GQG T Q+ A L G + +
Sbjct: 501 LGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATEL--------GIPADDIM 552
Query: 1110 VVQADTLSVIQGGFTAGSTTSEASCQVVRDCC-NIXXXXXXXXXXXXQGQMGNVEWET-- 1166
+ + +T + G T GS ++ + I + G++EW+
Sbjct: 553 IEEGNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDR 612
Query: 1167 -----------LIQQAHLQSVNLSASSMYVPDFTSVQYLN-------YGAAVSEVEVNLL 1208
+++ S N ++ P +V Y + +GA +++++
Sbjct: 613 FRVKGLPEKFKTMKELAWASYNSPPPNLE-PGLEAVNYYDPPNMTYPFGAYFCIMDIDID 671
Query: 1209 TGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTY 1268
TG R + DCG +NP + GQ+ G + M +E + G V+ +
Sbjct: 672 TGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGASFMDF 731
Query: 1269 KIPTLDTIPK-KFNVEILNSGHHKKRVLSSKASGEPP 1304
+PT PK + + + S HH + +K GE P
Sbjct: 732 FLPTAVETPKWETDYTVTPSPHHP---IGAKGVGESP 765
>pdb|1N5W|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N5W|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N60|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N60|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N61|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N61|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N62|B Chain B, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N62|E Chain E, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N63|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1N63|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
Length = 809
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 167/761 (21%), Positives = 280/761 (36%), Gaps = 106/761 (13%)
Query: 619 GEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDVVTALLSYKDIPEGGQN 677
G+ YVDD+ P L+G F+ S+ ARIK I+ K++++P V A+L+ D+ +
Sbjct: 36 GKGNYVDDVKLP-GMLFGDFVRSSHAHARIKSIDTSKAKALPGVF-AVLTAADLKPLNLH 93
Query: 678 IGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXXXYEMGNLEPPILSVE 737
+ + ADE Q VAFVVA + YE P+L
Sbjct: 94 YMPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYE----PLPVL--- 146
Query: 738 EAVDRSSLFEVPSFLYPKPVGDISKGMNEA------------------DHRILAAEIKLG 779
VD E + L + + D G + A D AE+
Sbjct: 147 --VDPFKAMEPDAPLLREDIKDKMTGAHGARKHHNHIFRWEIGDKEGTDATFAKAEVVSK 204
Query: 780 SQYYFY------METQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVIT 832
+ ++ +ET +A D+ L ++ + Q P ++ G+PEH + VI
Sbjct: 205 DMFTYHRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIA 264
Query: 833 RRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFK 892
+GG FG K + A +A+ L PV+ R ++ +T +
Sbjct: 265 PDIGGGFGNK-VGAYSGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAAT 323
Query: 893 SNGKITALQLNILIDAG---LSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPS-- 947
+GKI A++ ++L D G D S M YD H + TN S
Sbjct: 324 KDGKILAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGG 383
Query: 948 ---RSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAG-EY 1003
R + R + + E IE +A L M+ +R N + Y + G EY
Sbjct: 384 VAYRCSFRV---TEAVYAIERAIETLAQRLEMDSADLRIKNFIQPEQFP--YMAPLGWEY 438
Query: 1004 AEYTLPLIWDKLAVSSSFNQ-RTEMIKE---FNRSNLWRKKGVCRLPIVHEVTLRSTPGK 1059
PL K + ++Q R E + F R G+ + E+ + + P K
Sbjct: 439 DSGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIG-ISFFTEI-VGAGPSK 496
Query: 1060 --------------VSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLL 1105
+ I GSV+ +G GQG T Q+ A L G
Sbjct: 497 NCDILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATEL--------GIPA 548
Query: 1106 EKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCC-NIXXXXXXXXXXXXQGQMGNVEW 1164
+ + + + +T + G T GS ++ + I + G++EW
Sbjct: 549 DDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEW 608
Query: 1165 ET-------------LIQQAHLQSVNLSASSMYVPDFTSVQYLN-------YGAAVSEVE 1204
+ +++ S N ++ P +V Y + +GA ++
Sbjct: 609 DVDRFRVKGLPEKFKTMKELAWASYNSPPPNLE-PGLEAVNYYDPPNMTYPFGAYFCIMD 667
Query: 1205 VNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEG 1264
+++ TG R + DCG +NP + GQ+ G + M +E + G V+
Sbjct: 668 IDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGAS 727
Query: 1265 TWTYKIPTLDTIPK-KFNVEILNSGHHKKRVLSSKASGEPP 1304
+ +PT PK + + + S HH + +K GE P
Sbjct: 728 FMDFFLPTAVETPKWETDYTVTPSPHHP---IGAKGVGESP 765
>pdb|1SIJ|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A. Aor
Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
pdb|1VLB|A Chain A, Structure Refinement Of The Aldehyde Oxidoreductase From
Desulfovibrio Gigas At 1.28 A
pdb|3FAH|A Chain A, Glycerol Inhibited Form Of Aldehyde Oxidoreductase From
Desulfovibrio Gigas
pdb|3FC4|A Chain A, Ethylene Glycol Inhibited Form Of Aldehyde Oxidoreductase
From Desulfovibrio Gigas
pdb|3L4P|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A. Aor
Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
Length = 907
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 161/722 (22%), Positives = 278/722 (38%), Gaps = 68/722 (9%)
Query: 630 PINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGS--- 686
P L+ A + + A IKGI+ V +++++KD+ +G I F +
Sbjct: 204 PAGTLHLAMVQAKVSHANIKGIDTSEALTMPGVHSVITHKDV-KGKNRITGLITFPTNKG 262
Query: 687 ----EPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDR 742
P+ DE G +A V ADS+ N E P +S A
Sbjct: 263 DGWDRPILCDEKVFQYGDCIALVCADSEANARAAAEKVKVDLEE---LPAYMSGPAAAAE 319
Query: 743 SSLFE---VPSFLYPKPV--GDISKGMNEADHRILAAEIKLGSQYYFYMETQTALA-VPD 796
++ P+ + +P+ G+ + + + + + +G Q + +E A A + D
Sbjct: 320 DAIEIHPGTPNVYFEQPIVKGEDTGPIFASADVTVEGDFYVGRQPHMPIEPDVAFAYMGD 379
Query: 797 EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATA-CAL 855
+ C + SI + IA +G+ + ++ +GG FG K P + A A+
Sbjct: 380 DGKCYIHSKSIGVHLHLY-MIAPGVGLEPDQLVLVANPMGGTFG---YKFSPTSEALVAV 435
Query: 856 AAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVS 915
AA RPV + + G R P ++ K +G + A++ + L+D G +
Sbjct: 436 AAMATGRPVHLRYNYQQQQQYTGKRSPWEMNVKFAAKKDGTLLAMESDWLVDHGPYSEFG 495
Query: 916 PIMP---SNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVAS 972
++ + IGA Y+ + + TN SA R G Q F +E +++ +A
Sbjct: 496 DLLTLRGAQFIGA--GYNIPNIRGLGRTVATNHVWGSAFRGYGAPQSMFASECLMDMLAE 553
Query: 973 TLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFN 1032
L M+ +R N + N + E ++LP + D+L + + K
Sbjct: 554 KLGMDPLELRYKNAYRPGDTN----PTGQEPEVFSLPDMIDQL----RPKYQAALEKAQK 605
Query: 1033 RSNLWRKKGVCRLPIVHEVTL---RSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMA 1089
S KKGV V+ L ++ + +DG++ V + GQG A
Sbjct: 606 ESTATHKKGVGISIGVYGSGLDGPDASEAWAELNADGTITVHTAWEDHGQGADIGCVGTA 665
Query: 1090 AFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCN--IXXXX 1147
AL + G EK++ +T + G + GS + +R C +
Sbjct: 666 HEALRPM-----GVAPEKIKFTWPNTATTPNSGPSGGSRQQVMTGNAIRVACENLLKACE 720
Query: 1148 XXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTS------VQYLNYGAAVS 1201
++ + T I + N +AS D + V Y+ YG ++
Sbjct: 721 KPGGGYYTYDELKAADKPTKI------TGNWTASGATHCDAVTGLGKPFVVYM-YGVFMA 773
Query: 1202 EVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYA-ANSDGLV 1260
EV V++ TG+TT+ ++ D G N GQI G QGIG + E++ +
Sbjct: 774 EVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDFEDIKKHATL 833
Query: 1261 VSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIR 1320
V G P + IP K ++ +N + GE PL S H A AI+
Sbjct: 834 VGAG-----FPFIKQIPDKLDIVYVNH-PRPDGPFGASGVGELPL---TSPHAAIINAIK 884
Query: 1321 EA 1322
A
Sbjct: 885 SA 886
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 73 LEDFTISSCLTLLCSV-NGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMS 131
L+ + +C+T + V +G ITT EG+G + HP+ + + +QCGFC+PG +S
Sbjct: 52 LDGKVVRACVTKMKRVADGAQITTIEGVGQPEN-LHPLQKAWVLHGGAQCGFCSPGFIVS 110
Query: 132 LFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVD 188
L R + K N CRCTGY+P+ DA AA ++
Sbjct: 111 AKGLLDTNADPSREDVRDWFQKHR----------NACRCTGYKPLVDAVMDAAAVIN 157
>pdb|1FFU|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The
Molybdenum Cofactor
pdb|1FFU|E Chain E, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The
Molybdenum Cofactor
pdb|1FFV|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|E Chain E, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 803
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 171/773 (22%), Positives = 283/773 (36%), Gaps = 113/773 (14%)
Query: 619 GEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI 678
G+ YVDDI P L+ + + RIK I + V A+L+ +D+ +
Sbjct: 33 GKGNYVDDIKMP-GMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLKPLKLHW 91
Query: 679 GSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXXXYE--------MGNLE 730
+ ADE Q VA V+AD + Y+ + L+
Sbjct: 92 MPTLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEYDELPVVIDPIDALK 151
Query: 731 P--PILSVEEAVDRSSLFEVP----SFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYF 784
P P+L E+ ++S P + ++ GD K +A + A SQ+ +
Sbjct: 152 PDAPVLR-EDLAGKTSGAHGPREHHNHIFTWGAGD--KAATDA---VFANAPVTVSQHMY 205
Query: 785 Y-------METQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVG 836
Y +ET +A D L Y + Q P ++ GIPE VR+++ +G
Sbjct: 206 YPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTVVSMLSGIPESKVRIVSPDIG 265
Query: 837 GAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGK 896
G FG K + P +A+ L RPV+ R ++ + + +GK
Sbjct: 266 GGFGNK-VGIYPGYVCAIVASIVLGRPVKWVEDRVENISTTAFARDYHMDGELAATPDGK 324
Query: 897 ITALQLNILIDAG-LSPDVSPI-MPSNMIGALK-KYDWGALHFDIKVCRTNLPSRSAMRA 953
I L++N++ D G P P+ + YD H +K TN +A
Sbjct: 325 ILGLRVNVVADHGAFDACADPTKFPAGLFHICSGSYDIPRAHCSVKGVYTN-------KA 377
Query: 954 PGEV---------QGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSL----NLFYESSA 1000
PG V + ++ E +++ +A L+M+ +R N + +E +
Sbjct: 378 PGGVAYXXSFRVTEAVYLIERMVDVLAQKLNMDKAEIRAKNFIRKEQFPYTTQFGFEYDS 437
Query: 1001 GEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRSTPGK- 1059
G+Y L + D + + ++ + N L V +V + P K
Sbjct: 438 GDY-HTALKKVLDAVDYPALRAEQAARRADPNSPTLMGIGLVTFTEVV-----GAGPSKM 491
Query: 1060 -------------VSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLE 1106
+ I GS + +G I GQG T Q+ A L G E
Sbjct: 492 CDILGVGMFDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATEL--------GIPSE 543
Query: 1107 KVRVVQADTLSVIQGGFTAGS-TTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWE 1165
++V + DT + G T GS +T A + I + +++WE
Sbjct: 544 VIQVEEGDTSTAPYGLGTYGSRSTPVAGAAIALAARKIHAKARKIAAHMLEVNENDLDWE 603
Query: 1166 T-----------------LIQQAHLQ-----SVNLSASSMY-VPDFTSVQYLNYGAAVSE 1202
+ QA+ Q L A Y P+FT +G +
Sbjct: 604 VDRFKVKGDDSKFKTMADIAWQAYHQPPAGLEPGLEAVHYYDPPNFT----YPFGIYLCV 659
Query: 1203 VEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVS 1262
V+++ TGET + R + DCG +NP + GQI G +G M ++ ++ G ++
Sbjct: 660 VDIDRATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTEGYAVAMGQQMPFDAQGNLLG 719
Query: 1263 EGTWTYKIPTLDTIPK-KFNVEILNSGHH---KKRVLSSKASGEPPLLLAVSV 1311
Y +PT P + + + S HH K V S G P A V
Sbjct: 720 NTLMDYFLPTAVETPHWETDHTVTPSPHHPIGAKGVAESPHVGSIPTFTAAVV 772
>pdb|1DGJ|A Chain A, Crystal Structure Of The Aldehyde Oxidoreductase From
Desulfovibrio Desulfuricans Atcc 27774
Length = 907
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 161/735 (21%), Positives = 274/735 (37%), Gaps = 73/735 (9%)
Query: 605 GEPITKSGAALQASGEAIYVDD--IPSPINCLYGAFIYSTKPLARIKGIEF-KSESVPDV 661
G I + A + +G A + D + P N L+ A + A IKGI+ ++E +P V
Sbjct: 177 GSSIPRPSAVAKVTGLAEFGADAALRMPENTLHLALAQAKVSHALIKGIDTSEAEKMPGV 236
Query: 662 VTALLSYKDIPEGGQNIGSKTIFGS-------EPLFADELTRCAGQPVAFVVADSQKNXX 714
+L++KD+ +G I F + P+ D G +A V ADS+ N
Sbjct: 237 YK-VLTHKDV-KGKNRITGLITFPTNKGDGWERPILNDSKIFQYGDALAIVCADSEANAR 294
Query: 715 XXXXXXXXXYEMGNLEPPILSVEEAVDRSSLF---EVPSFLYPK---PVGDISKGMNEAD 768
E L P +S EA+ ++ P+ Y + D N+
Sbjct: 295 AAAEKVKFDLE---LLPEYMSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPA 351
Query: 769 HRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIP-EHN 827
+ + Q + +E +E +V++S IA LG+ +
Sbjct: 352 NVVAEGSYYTQRQPHLPIEPDVGYGYINEQGQVVIHSKSVAIHLHALMIAPGLGLEFPKD 411
Query: 828 VRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITY 887
+ ++ GG FG K M A+ A RP + + G R P T
Sbjct: 412 LVLVQNTTGGTFGYKFSPTMEALVGVAVMATG--RPCHLRYNYEQQQNYTGKRSPFWTTM 469
Query: 888 SVGFKSNGKITALQLNILIDAGLSPDVSPIMP---SNMIGALKKYDWGALHFDIKVCRTN 944
GKI A++ + +D G + ++ + IGA Y + + TN
Sbjct: 470 RYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGA--GYGIANIRGTGRTVATN 527
Query: 945 LPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYA 1004
+A R G + F +E +++ +A L M+ +R +N + +S+G+
Sbjct: 528 HCWGAAFRGYGAPESEFPSEVLMDELAEKLGMDPFELRALNCYREGDT-----TSSGQIP 582
Query: 1005 E-YTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTL---RSTPGKV 1060
E +LP ++DK+ + + + +KE RS K+GV V+ L ++ V
Sbjct: 583 EVMSLPEMFDKM--RPYYEESKKRVKE--RSTAEIKRGVGVALGVYGAGLDGPDTSEAWV 638
Query: 1061 SILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQ 1120
+ DGSV + + GQG A AL + G E + +V DT
Sbjct: 639 ELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPL-----GITPENIHLVMNDTSKTPN 693
Query: 1121 GGFTAGSTTSEASCQVVRDCCN--IXXXXXXXXXXXXQGQMG--------NVEWETLIQQ 1170
G GS + + +R C I +M + +W +
Sbjct: 694 SGPAGGSRSQVVTGNAIRVACEMLIEGMRKPGGGFFTPAEMKAEGRPMRYDGKWTAPAKD 753
Query: 1171 AHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPA 1230
+ S + Y+ YG ++EV V + TG+ T+ + + D G+ N
Sbjct: 754 CDAKGQG-SPFACYM----------YGLFLTEVAVEVATGKATVEKMVCVADIGKICNKL 802
Query: 1231 VDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHH 1290
V GQI G QG+G + E+Y + L IP++ IP + + +
Sbjct: 803 VVDGQIYGGLAQGVGLALSEDY----EDLKKHSTMGGAGIPSIKMIPDDIEIVYVET-PR 857
Query: 1291 KKRVLSSKASGEPPL 1305
K + GE PL
Sbjct: 858 KDGPFGASGVGEMPL 872
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 73 LEDFTISSCLTLLCSV-NGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMS 131
L+ + +C+ + V +TT EG+G HP+ + A+QCGFCTPG +S
Sbjct: 52 LDGKVVRACIIKMSRVAENASVTTLEGIGAPDC-LHPLQHAWIQHGAAQCGFCTPGFIVS 110
Query: 132 LFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAA 185
+ L + R + K N+CRCTGY+P+ DA AA
Sbjct: 111 AKALLDENVAPSREDVRDWFQKHH----------NICRCTGYKPLVDAVMDAAA 154
>pdb|1T3Q|B Chain B, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|E Chain E, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 788
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 148/634 (23%), Positives = 239/634 (37%), Gaps = 57/634 (8%)
Query: 687 EPLFADELTRCAGQPVAFVVADSQKNXXXXXXXXXXXYEMGNLEPPILSVEEAVDRSSLF 746
+PL A+ +TR G+ VA VVA S+ YE P + +E A++ +
Sbjct: 101 QPLLANGVTRFVGEIVAVVVASSRAIAEDAAQLIQVEYEE---LPAVTGIEAALEGEA-- 155
Query: 747 EVPSFLYPKPVGDISKGMNE------ADHRILAAEIKLGSQYYFYMETQTALAVPD-EDN 799
L V S+ +E + ++ + G MET+ A+A +
Sbjct: 156 RANDTLAGNVVSRTSRARDELAPIFASSAGVVRGQFSCGRVSACPMETRGAVAQYEWTTQ 215
Query: 800 CLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYK 859
L+++++ Q P +A IPEH + V VGG FG KA P L +
Sbjct: 216 QLILWTATQMPSFVRTMVAMFCAIPEHLIEVRVPDVGGGFGQKA-HLHPEELLVCLLSRA 274
Query: 860 LCRPVRIYVKRKTDMIMVGGRHPMKITYSVG--FKSNGKITALQLNILIDAGLSPDV--S 915
L RPVR R+ + + G H + +G F +G+ AL+ + D G ++ +
Sbjct: 275 LGRPVRWIEDRQENFL--GATHAKQQRNEMGLAFDGDGRFLALENRSITDGGAYNNLPWT 332
Query: 916 PIMPSNMIGA--LKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVAST 973
++ S++ A L Y A+ + TN A R G G E +I+ A
Sbjct: 333 QLVESHVGNAVILGVYKVPAVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAARQ 392
Query: 974 LSMEVDFVRNINLHTHKSL----NLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIK 1029
L + +R N+ + L G Y + T+ L+ +++ +F QR +
Sbjct: 393 LGLSPFEIRRRNVVMPEDFPFTNRLGQTHREGTYLQ-TINLL-EEMVNPEAFRQRQAEAR 450
Query: 1030 EFNRS--------NLWRKKGVCRLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGL 1081
+ N G L + T V I G V V GQG
Sbjct: 451 ARGKYLGLGVSVFNEVTGTGTRTLSFLGTPTTTHDSATVRIDPTGKVTVTTSLASSGQGH 510
Query: 1082 WTKVKQMAAFALS------SIKCGGTGNLL------EKVRVVQADTL----SVIQGGFT- 1124
T + Q+AA L I+ G T N + V+ A ++ S+++
Sbjct: 511 ETTLAQIAADVLGVPASDVVIQAGSTKNTYGFGAYASRGAVIGAGSIGRAASIVRERVKQ 570
Query: 1125 -AGSTTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMGNVEWETLIQQAHLQSVNLSASSM 1183
AG AS +V + + +G + + L A++
Sbjct: 571 LAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFADATHPPGFDA-TLEATAT 629
Query: 1184 YVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQG 1243
Y P S L G + VE++ T T + + DCG +NP + GQI G Q
Sbjct: 630 YDP---SDLVLANGGHAAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQA 686
Query: 1244 IGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIP 1277
IG +LEE + G +V+ Y IPT +P
Sbjct: 687 IGQTLLEEVIYDDFGQLVTTTLMDYLIPTTLDVP 720
>pdb|1N5W|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N5W|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N60|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N60|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N61|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N61|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N62|A Chain A, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N62|D Chain D, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N63|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1N63|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1ZXI|A Chain A, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
pdb|1ZXI|D Chain D, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
Length = 166
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 73 LEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSL 132
L+ ++ SC NG ITT EG+ + + F H QCG+CTPGM M
Sbjct: 54 LDGMSVKSCTMFAVQANGASITTIEGMAAPDGTLSALQEGFRMMHGLQCGYCTPGMIM-- 111
Query: 133 FSALVDAEKTHR---PEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVD 188
++HR P P T +E I GNLCRCTGY+ I A + AA ++
Sbjct: 112 --------RSHRLLQENPSP-----TEAEIRFGIGGNLCRCTGYQNIVKAIQYAAAKIN 157
>pdb|1FFU|A Chain A, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFU|D Chain D, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFV|A Chain A, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|D Chain D, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 163
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSXXXXXXXXXXXXXXXXXSKYNPELDQL 73
+ VNG K + +V+P T L+ FLR S +
Sbjct: 6 ITVNVNG-KAQEKAVEPRTLLIHFLREELNLTGAHIGCET----------SHCGACTVDI 54
Query: 74 EDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLF 133
+ ++ SC L +G + T EGL N K H + + F H QCGFCTPGM M +
Sbjct: 55 DGRSVKSCTHLAVQCDGSEVLTVEGLAN-KGVLHAVQEGFYKEHGLQCGFCTPGMLMRAY 113
Query: 134 SALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADA 179
L + P P T +E + GNLCRCTGY+ I A
Sbjct: 114 RFLQE-----NPNP-------TEAEIRMGMTGNLCRCTGYQNIVKA 147
>pdb|1T3Q|A Chain A, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|D Chain D, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 168
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 78 ISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALV 137
+ SCLTL GC I T EGL + + + F HA QCGFCT GM + S L
Sbjct: 65 MRSCLTLAVQAEGCSIETVEGLSQGEK-LNALQDSFRRHHALQCGFCTAGMLATARSILA 123
Query: 138 DAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADA 179
+ P P + E + ++GNLCRCTGY I DA
Sbjct: 124 E-------NPAP-----SRDEVREVMSGNLCRCTGYETIIDA 153
>pdb|3HRD|B Chain B, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|F Chain F, Crystal Structure Of Nicotinate Dehydrogenase
Length = 330
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 117/292 (40%), Gaps = 42/292 (14%)
Query: 1060 VSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVI 1119
V I DGS V G ++GQG T + Q+AA L G EK+ V DT+
Sbjct: 28 VEIHGDGSANVMFGAADIGQGSGTAMAQIAAEEL--------GLDYEKIHVTWGDTMVTP 79
Query: 1120 QGGFTAGS----TTSEASCQVVRDCCNIXXXXXXXXXXXXQGQMG--------NVEWETL 1167
GG T+ S T A R ++ + E
Sbjct: 80 DGGATSASRQTLITGNAVILACRQAKETLAKTAAEKLDCAPEELSFRDNTVFITADPERS 139
Query: 1168 IQQAHLQSVNLSASSM------YVPDFTSV----------QYLNYGAAVSEVEVNLLTGE 1211
+ L + +A M Y P+ T + + +Y ++EVEV+ TGE
Sbjct: 140 MTYGELMAAMKAAGRMAVGAGSYNPNTTGLAPENMSGIPFEVYSYATTIAEVEVDTETGE 199
Query: 1212 TTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANS-DGLVVSEGTWTYKI 1270
+++ +D G +N ++ GQIEG G GF ++EE N+ +G + + Y I
Sbjct: 200 VDVLKVVSAHDVGTPINRSMVEGQIEGGVTMGQGFVLMEEIEVNTKNGAIKNPSMSKYII 259
Query: 1271 PTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 1322
P+ +P+ ++ + + G +K GEP L+ + A AAI +A
Sbjct: 260 PSNRDVPEIHSILVESEGGPGP--FGAKGVGEPALIPMIP---AVVAAIEDA 306
>pdb|1RM6|C Chain C, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1RM6|F Chain F, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|C Chain C, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|F Chain F, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
Length = 161
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 80 SCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFH---ASQCGFCTPGMCMSLFSAL 136
+C TL V G + T E L T + + A FH +QCGFCTPGM M+
Sbjct: 60 ACSTLAHQVAGKKVETVESLATQGT----LSKLQAAFHEKLGTQCGFCTPGMIMA----- 110
Query: 137 VDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAA 185
+E R P P + E + A+AGNLCRCTGY I + ++ AA
Sbjct: 111 --SEALLRKNPSP-----SRDEIKAALAGNLCRCTGYVKIIKSVETAAA 152
>pdb|1FIQ|B Chain B, Crystal Structure Of Xanthine Oxidase From Bovine Milk
Length = 350
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 147/353 (41%), Gaps = 38/353 (10%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPELSV 299
+W +++EL ++ + +KLV GNT +G + ++ + I +IPEL+
Sbjct: 16 TWIQASTLKELLDL-----KAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNA 70
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
+ GI GA +S + L E + ++ VF+ + + A + +++ AS+G
Sbjct: 71 VEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLG 130
Query: 360 GNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSRSILLS 415
GN++ A SD+ V + +G + I++ G + M F + L ILLS
Sbjct: 131 GNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEILLS 187
Query: 416 VEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNN 475
+EIP + F ++ A R + + + P ++V
Sbjct: 188 IEIPY----------SREDEFFSAFKQASR-REDDIAKVTCGMRVLFQP----GSMQVKE 232
Query: 476 CRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRD--SVVPEDGTSIPAYRSS 533
L +G + I A + + K N +L + L + S+ P+ + +R +
Sbjct: 233 LALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRT 291
Query: 534 LAVGFLYEFFGSLTEMKNGISRDWLCG-----YSNNVSLKDSHVQQNHKQFDE 581
L + F ++F+ ++ + S+D CG Y++ L H N + F E
Sbjct: 292 LTLSFFFKFYLTVLKKLGKDSKD-KCGKLDPTYTSATLLFQKHPPANIQLFQE 343
>pdb|3B9J|B Chain B, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
pdb|3B9J|J Chain J, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
Length = 350
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 138/327 (42%), Gaps = 33/327 (10%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPELSV 299
+W +++EL ++ + +KLV GNT +G + ++ + I +IPEL+
Sbjct: 16 TWIQASTLKELLDL-----KAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNA 70
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
+ GI GA +S + L E + ++ VF+ + + A + +++ AS+G
Sbjct: 71 VEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLG 130
Query: 360 GNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSRSILLS 415
GN++ A SD+ V + +G + I++ G + M F + L ILLS
Sbjct: 131 GNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEILLS 187
Query: 416 VEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNN 475
+EIP + F ++ A R + + + P ++V
Sbjct: 188 IEIPY----------SREDEFFSAFKQASR-REDDIAKVTCGMRVLFQP----GSMQVKE 232
Query: 476 CRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRD--SVVPEDGTSIPAYRSS 533
L +G + I A + + K N +L + L + S+ P+ + +R +
Sbjct: 233 LALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRT 291
Query: 534 LAVGFLYEFFGSLTEMKNGISRDWLCG 560
L + F ++F+ ++ + S+D CG
Sbjct: 292 LTLSFFFKFYLTVLKKLGKDSKD-KCG 317
>pdb|3NVV|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVV|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVW|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVW|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVY|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVY|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
Length = 334
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPELSV 299
+W +++EL ++ + +KLV GNT +G + ++ + I +IPEL+
Sbjct: 41 TWIQASTLKELLDL-----KAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNA 95
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
+ GI GA +S + L E + ++ VF+ + + A + +++ AS+G
Sbjct: 96 VEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLG 155
Query: 360 GNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSRSILLS 415
GN++ A SD+ V + +G + I++ G + M F + L ILLS
Sbjct: 156 GNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEILLS 212
Query: 416 VEIP 419
+EIP
Sbjct: 213 IEIP 216
>pdb|3ETR|B Chain B, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|M Chain M, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3EUB|B Chain B, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|K Chain K, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|T Chain T, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|3 Chain 3, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3NRZ|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NRZ|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NS1|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NS1|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NVZ|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3NVZ|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3SR6|B Chain B, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|K Chain K, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 305
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEH--YDKYIDIRYIPELSV 299
+W +++EL ++ + +KLV GNT +G + ++ + I +IPEL+
Sbjct: 12 TWIQASTLKELLDL-----KAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNA 66
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
+ GI GA +S + L E + ++ VF+ + + A + +++ AS+G
Sbjct: 67 VEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLG 126
Query: 360 GNLVMAQRKHFPSDVATVLLGAGAMVNIMT-GQKCEKLMLEEFL---ERPPLDSRSILLS 415
GN++ A SD+ V + +G + I++ G + M F + L ILLS
Sbjct: 127 GNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEILLS 183
Query: 416 VEIP 419
+EIP
Sbjct: 184 IEIP 187
>pdb|3HRD|D Chain D, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|H Chain H, Crystal Structure Of Nicotinate Dehydrogenase
Length = 160
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 78 ISSCLTLLCSVNGCLITTSEGLG-NSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSAL 136
+++C L + I T EG+ + K + Q F A QCG+CTPGM ++ AL
Sbjct: 59 VTTCCMLAGQADESTIITLEGVAEDGKPSL--LQQCFLEAGAVQCGYCTPGMILTA-KAL 115
Query: 137 VDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACK 181
+D P+P T E A++GNLCRCTGY I A +
Sbjct: 116 LDKN----PDP-------TDEEITVAMSGNLCRCTGYIKIHAAVR 149
>pdb|1T3Q|C Chain C, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|F Chain F, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 288
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 53/273 (19%)
Query: 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMG--YYKEVEHYDKYIDIRYIPELSV 299
S+ +P S+QE+ VL ++ ++++AG + + + +D+R + EL
Sbjct: 7 SYRAPASLQEVIQVL-----ADDPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFE 61
Query: 300 IRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVG 359
I + + +GA VT + +T ++ + + K+ H +A + +RN ++G
Sbjct: 62 ISQSAGILSVGAMVT------HFRNKTDPTVAKCVPILPKVLAH---VAHQAVRNRGTLG 112
Query: 360 GNLVMAQR-KHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLER---PPLDSRSILLS 415
G+L A P +AT+ GA + I + + +F++ L++ +L+
Sbjct: 113 GSLAHADAGAEMPFLMATL----GATMYIASSAGVRSVSATDFMKGHYFTDLEAGEVLVR 168
Query: 416 VEIPC----WDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGI 471
VEIP W+ F+ Y R G+ + AA L + G
Sbjct: 169 VEIPIPALHWE--------------FDEY---ARRKGDYALVMAAAGL-------SMQGG 204
Query: 472 RVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLN 504
R R+A GA + A +A R +FL GKV++
Sbjct: 205 RCVAARIALGAV-EERAHQAIRANDFLVGKVID 236
>pdb|3HRD|C Chain C, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|G Chain G, Crystal Structure Of Nicotinate Dehydrogenase
Length = 296
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 110/279 (39%), Gaps = 28/279 (10%)
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGM--GYYKEVEHYDKYIDIRYIPELSVI 300
+ +P +++E + +L + + ++AG T + E D IDI+ + EL I
Sbjct: 6 FFAPKTLEEAKGLLHQYK---DVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYI 62
Query: 301 RRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGG 360
R ++ I IGA T ++ E F + K A ++ S IRN ++GG
Sbjct: 63 RVEENTIHIGALSTFTQI------ENHPFIRSHVRALYKAAS---QVGSPQIRNLGTIGG 113
Query: 361 NLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILLSVEIPC 420
NL + D + + A V + + + ++ L +F + R+ L + EI
Sbjct: 114 NLSTSS---VAGDGVSAMTTLDATVVLESVRGTRQMKLTDFFDGEGFKRRNALEADEI-- 168
Query: 421 WDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAF 480
+T + ++ Y+ A R L + + K D +
Sbjct: 169 --MTEVIIDRPDAHSASAFYKLAKR------KSLAISVIGGGMAVKVDDAGVCTWASMRG 220
Query: 481 GAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSV 519
G G ++ + ++ EE L G L + + +L D+V
Sbjct: 221 GCIG-RYPLHFKQAEEMLVGAPLTMETMEATLPILHDTV 258
>pdb|1FFU|C Chain C, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFU|F Chain F, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
Length = 287
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 21/125 (16%)
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMG-----YYKEVEHYDKYIDIRYIPEL 297
+H+P SV E +L + GS+ +KL+AG + + + EH IDI IPEL
Sbjct: 8 YHAPKSVGEAVALLGQL-GSD---AKLLAGGHSLLPMMKLRFAQPEHL---IDINRIPEL 60
Query: 298 SVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSAS 357
IR + + + IGA + I + + + +A + IA +RN +
Sbjct: 61 RGIREEGSTVVIGAMTVENDLISSPIVQAR---------LPLLAEAAKLIADPQVRNRGT 111
Query: 358 VGGNL 362
+GG++
Sbjct: 112 IGGDI 116
>pdb|1FFV|C Chain C, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|F Chain F, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 287
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 21/125 (16%)
Query: 243 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMG-----YYKEVEHYDKYIDIRYIPEL 297
+H+P SV E +L + GS+ +KL+AG + + + EH IDI IPEL
Sbjct: 8 YHAPKSVGEAVALLGQL-GSD---AKLLAGGHSLLPMMKLRFAQPEHL---IDINRIPEL 60
Query: 298 SVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSAS 357
IR + + + IGA + I + + + +A + IA +RN +
Sbjct: 61 RGIREEGSTVVIGAMTVENDLISSPIVQAR---------LPLLAEAAKLIADPQVRNRGT 111
Query: 358 VGGNL 362
+GG++
Sbjct: 112 IGGDI 116
>pdb|3A0R|A Chain A, Crystal Structure Of Histidine Kinase Thka (Tm1359) In
Complex With Response Regulator Protein Trra (Tm1360)
Length = 349
Score = 31.6 bits (70), Expect = 3.6, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 16/143 (11%)
Query: 286 DKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHME 345
++Y +IR+ P R +T + G +TI E K E + E L I G M
Sbjct: 85 ERYFNIRFSP----FRNAKTQLLEGVIITIDDVTELYKYEEERKRRERL----SILGEMT 136
Query: 346 KIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCE-KLMLEEFLER 404
+ IRN ++ G +M +KH D T+ +NI+T + + +++E LE
Sbjct: 137 ARVAHEIRNPITIIGGFIMRMKKHL-DDPETL----KKYINIITNELSRLETIVKEILEY 191
Query: 405 PPLDSRSILLSVEIPCWDLTRNV 427
R +L E +L R V
Sbjct: 192 S--KERQVLEFTEFNLNELIREV 212
>pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With
Glucose
Length = 485
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 24/140 (17%)
Query: 531 RSSLAVGFLYEFFGSLTEMKNGISRDWLCGYS-NNVSLKDS-HVQQNHKQFDESKVPTLL 588
+ +L +GF + + S ++ GI + W G+ NV D + QN E + +
Sbjct: 148 KDTLPLGFTFSYPASQNKINEGILQRWTKGFDIPNVEGHDVVPLLQNEISKRELPIEIVA 207
Query: 589 SSAEQVVQLSREYYPVGEPITKSGAALQASG---------------EAIYVDDIPS---- 629
+ V L YY +P TK G +G E DDIPS
Sbjct: 208 LINDTVGTLIASYYT--DPETKMGVIF-GTGVNGAFYDVVSDIEKLEGKLADDIPSNSPM 264
Query: 630 PINCLYGAFIYSTKPLARIK 649
INC YG+F L R K
Sbjct: 265 AINCEYGSFDNEHLVLPRTK 284
>pdb|4ETT|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 Mutant
E2764k
Length = 210
Score = 30.8 bits (68), Expect = 4.9, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1288 GHHKKRVLSSKASGEPPLLLAVSVHCAT-RAAIREARKQLLSWSQLNGSDFT 1338
G KK+ L +K G PLL+ A +A RE ++LL + Q+NG T
Sbjct: 157 GRKKKQELEAKGGGTHPLLVPYDTLTAKEKARDREKAQELLKFLQMNGYAVT 208
>pdb|4ESU|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 Mutant
S2776m
Length = 210
Score = 30.8 bits (68), Expect = 4.9, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1288 GHHKKRVLSSKASGEPPLLLAVSVHCAT-RAAIREARKQLLSWSQLNGSDFT 1338
G KK+ L +K G PLL+ A +A RE ++LL + Q+NG T
Sbjct: 157 GRKKKQELEAKGGGTHPLLVPYDTLTAKEKARDREKAQELLKFLQMNGYAVT 208
>pdb|4ERT|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 (2734-2940)
Length = 210
Score = 30.8 bits (68), Expect = 4.9, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1288 GHHKKRVLSSKASGEPPLLLAVSVHCAT-RAAIREARKQLLSWSQLNGSDFT 1338
G KK+ L +K G PLL+ A +A RE ++LL + Q+NG T
Sbjct: 157 GRKKKQELEAKGGGTHPLLVPYDTLTAKEKARDREKAQELLKFLQMNGYAVT 208
>pdb|3RQR|A Chain A, Crystal Structure Of The Ryr Domain Of The Rabbit Ryanodine
Receptor
Length = 227
Score = 30.8 bits (68), Expect = 5.0, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1288 GHHKKRVLSSKASGEPPLLLAVSVHCAT-RAAIREARKQLLSWSQLNGSDFT 1338
G KK+ L +K G PLL+ A +A RE ++LL + Q+NG T
Sbjct: 174 GRKKKQELEAKGGGTHPLLVPYDTLTAKEKARDREKAQELLKFLQMNGYAVT 225
>pdb|4ETU|A Chain A, Crystal Structure Of Rabbit Ryanodine Receptor 1 Mutant
R2939s
Length = 210
Score = 30.8 bits (68), Expect = 5.5, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1288 GHHKKRVLSSKASGEPPLLLAVSVHCAT-RAAIREARKQLLSWSQLNGSDFT 1338
G KK+ L +K G PLL+ A +A RE ++LL + Q+NG T
Sbjct: 157 GRKKKQELEAKGGGTHPLLVPYDTLTAKEKARDREKAQELLKFLQMNGYAVT 208
>pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct
Amino Acid Sequence
Length = 486
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 60/161 (37%), Gaps = 30/161 (18%)
Query: 510 EAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYS-NNVSLK 568
+++K D P+ G S P + +GF + F S ++ GI + W G+ N+
Sbjct: 133 DSLKAFIDEQFPQ-GISEP-----IPLGFTFSFPASQNKINEGILQRWTKGFDIPNIENH 186
Query: 569 DSHVQQNHKQFDESKVPTLLSS--AEQVVQLSREYYPVGEPITKSGAALQASGEAIYVD- 625
D V KQ + +P + + + L YY +P TK G Y D
Sbjct: 187 DV-VPMLQKQITKRNIPIEVVALINDTTGTLVASYY--TDPETKMGVIFGTGVNGAYYDV 243
Query: 626 -------------DIPS----PINCLYGAFIYSTKPLARIK 649
DIP INC YG+F L R K
Sbjct: 244 CSDIEKLQGKLSDDIPPSAPMAINCEYGSFDNEHVVLPRTK 284
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,975,664
Number of Sequences: 62578
Number of extensions: 1562528
Number of successful extensions: 3477
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3219
Number of HSP's gapped (non-prelim): 87
length of query: 1383
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1272
effective length of database: 8,027,179
effective search space: 10210571688
effective search space used: 10210571688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)