Query 000629
Match_columns 1383
No_of_seqs 475 out of 3463
Neff 6.9
Searched_HMMs 46136
Date Mon Apr 1 21:00:35 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000629.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000629hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00192 aldehyde oxidase 100.0 1E-269 3E-274 2635.4 134.6 1330 10-1366 2-1341(1344)
2 TIGR02969 mam_aldehyde_ox alde 100.0 2E-262 4E-267 2564.9 127.8 1266 13-1364 2-1317(1330)
3 KOG0430 Xanthine dehydrogenase 100.0 1E-263 2E-268 2371.2 105.3 1246 12-1362 1-1255(1257)
4 PLN02906 xanthine dehydrogenas 100.0 9E-260 2E-264 2542.3 126.6 1247 31-1360 1-1315(1319)
5 PRK09800 putative hypoxanthine 100.0 2E-185 5E-190 1772.6 92.6 878 12-1355 1-954 (956)
6 TIGR03313 Se_sel_red_Mo probab 100.0 2E-182 5E-187 1747.2 89.7 872 16-1355 1-950 (951)
7 TIGR03311 Se_dep_Molyb_1 selen 100.0 4E-175 1E-179 1671.9 82.3 832 14-1351 1-847 (848)
8 TIGR02965 xanthine_xdhB xanthi 100.0 1E-153 2E-158 1467.8 75.9 723 604-1356 1-756 (758)
9 TIGR03194 4hydrxCoA_A 4-hydrox 100.0 4E-148 9E-153 1412.5 73.2 698 608-1354 1-746 (746)
10 PRK09970 xanthine dehydrogenas 100.0 8E-148 2E-152 1416.0 74.8 708 603-1356 2-755 (759)
11 TIGR02416 CO_dehy_Mo_lg carbon 100.0 1E-147 2E-152 1414.8 74.7 705 612-1352 1-769 (770)
12 COG4631 XdhB Xanthine dehydrog 100.0 3E-147 6E-152 1247.1 55.4 726 600-1356 15-773 (781)
13 TIGR03196 pucD xanthine dehydr 100.0 3E-145 6E-150 1388.5 72.4 702 603-1351 2-768 (768)
14 COG1529 CoxL Aerobic-type carb 100.0 4E-118 9E-123 1133.1 67.6 703 602-1355 4-730 (731)
15 COG4630 XdhA Xanthine dehydrog 100.0 3E-110 7E-115 916.7 32.0 469 11-550 6-482 (493)
16 TIGR02963 xanthine_xdhA xanthi 100.0 4E-106 9E-111 973.1 46.6 458 14-545 1-466 (467)
17 PF02738 Ald_Xan_dh_C2: Molybd 100.0 2E-104 4E-109 989.9 46.5 509 754-1277 17-547 (547)
18 TIGR03193 4hydroxCoAred 4-hydr 100.0 2.5E-53 5.4E-58 428.9 16.5 147 14-184 2-148 (148)
19 PRK09971 xanthine dehydrogenas 100.0 3.4E-52 7.4E-57 478.6 26.4 273 242-550 6-287 (291)
20 PRK09908 xanthine dehydrogenas 100.0 1.1E-52 2.3E-57 428.4 17.1 154 7-184 3-156 (159)
21 COG2080 CoxS Aerobic-type carb 100.0 1E-51 2.2E-56 415.3 15.5 152 11-185 1-152 (156)
22 TIGR03198 pucE xanthine dehydr 100.0 1.5E-51 3.2E-56 420.1 15.8 148 12-184 2-149 (151)
23 PRK11433 aldehyde oxidoreducta 100.0 5.6E-50 1.2E-54 427.2 18.0 162 12-186 50-215 (217)
24 TIGR03199 pucC xanthine dehydr 100.0 3.7E-49 8E-54 448.1 24.5 256 246-540 1-263 (264)
25 TIGR03195 4hydrxCoA_B 4-hydrox 100.0 6.1E-49 1.3E-53 451.5 25.8 272 240-547 4-320 (321)
26 COG1319 CoxM Aerobic-type carb 100.0 4.8E-46 1E-50 417.0 22.4 271 240-549 3-282 (284)
27 PRK09799 putative oxidoreducta 100.0 4.3E-45 9.3E-50 411.9 23.9 250 242-549 4-254 (258)
28 TIGR03312 Se_sel_red_FAD proba 100.0 3.9E-44 8.5E-49 403.5 23.9 251 241-549 2-253 (257)
29 PF00941 FAD_binding_5: FAD bi 100.0 4.9E-36 1.1E-40 319.0 11.4 163 240-421 2-171 (171)
30 PF01799 Fer2_2: [2Fe-2S] bind 100.0 6.9E-30 1.5E-34 230.9 6.6 75 95-182 1-75 (75)
31 PF01315 Ald_Xan_dh_C: Aldehyd 99.9 4.1E-28 8.8E-33 239.4 7.1 107 618-729 1-110 (111)
32 PF03450 CO_deh_flav_C: CO deh 99.7 1.9E-16 4.1E-21 154.9 10.9 101 439-546 2-103 (103)
33 COG1529 CoxL Aerobic-type carb 99.3 3.9E-14 8.5E-19 182.1 -5.0 416 595-1081 176-620 (731)
34 PRK12386 fumarate reductase ir 99.0 3.8E-10 8.3E-15 126.7 5.6 69 21-101 20-93 (251)
35 PRK05950 sdhB succinate dehydr 98.4 2.5E-07 5.4E-12 104.0 6.0 69 21-101 18-91 (232)
36 TIGR00384 dhsB succinate dehyd 98.2 1.1E-06 2.3E-11 98.1 5.7 69 21-101 15-87 (220)
37 PRK12576 succinate dehydrogena 98.2 1.5E-06 3.2E-11 100.0 6.4 70 21-101 25-100 (279)
38 PF13510 Fer2_4: 2Fe-2S iron-s 97.9 2.3E-05 4.9E-10 73.6 6.7 69 12-96 2-80 (82)
39 cd00207 fer2 2Fe-2S iron-sulfu 97.7 4.6E-05 9.9E-10 71.5 5.3 69 14-85 1-77 (84)
40 PRK12385 fumarate reductase ir 97.6 3.6E-05 7.9E-10 87.0 3.8 67 21-100 25-95 (244)
41 PF13085 Fer2_3: 2Fe-2S iron-s 97.6 0.00013 2.8E-09 72.0 7.1 70 21-101 19-94 (110)
42 PRK08493 NADH dehydrogenase su 97.6 0.00011 2.4E-09 95.5 7.4 96 14-127 2-102 (819)
43 PF00111 Fer2: 2Fe-2S iron-sul 97.3 0.0003 6.4E-09 65.2 4.6 47 16-64 1-48 (78)
44 PRK12814 putative NADPH-depend 97.1 0.00071 1.5E-08 87.6 7.6 92 13-125 3-101 (652)
45 PRK12577 succinate dehydrogena 97.0 0.0036 7.8E-08 74.2 11.8 70 21-101 19-101 (329)
46 PRK08640 sdhB succinate dehydr 96.9 0.0011 2.3E-08 75.4 5.7 68 21-101 23-101 (249)
47 PRK07569 bidirectional hydroge 96.9 0.0027 5.8E-08 71.8 8.4 96 13-128 3-107 (234)
48 PRK06259 succinate dehydrogena 96.9 0.002 4.3E-08 80.7 8.0 64 21-97 21-88 (486)
49 PRK13552 frdB fumarate reducta 96.8 0.001 2.2E-08 75.2 4.4 69 21-101 24-96 (239)
50 PRK07570 succinate dehydrogena 96.7 0.0019 4.1E-08 73.3 5.3 70 21-100 20-103 (250)
51 PRK14652 UDP-N-acetylenolpyruv 96.6 0.0057 1.2E-07 71.6 8.7 161 235-422 30-194 (302)
52 COG0479 FrdB Succinate dehydro 96.4 0.0046 9.9E-08 68.9 5.6 69 21-101 20-92 (234)
53 PRK12575 succinate dehydrogena 96.3 0.0059 1.3E-07 68.8 5.8 68 21-101 23-94 (235)
54 PF01565 FAD_binding_4: FAD bi 96.2 0.0072 1.6E-07 62.3 5.8 106 242-367 3-109 (139)
55 PRK14653 UDP-N-acetylenolpyruv 96.1 0.044 9.5E-07 64.0 11.8 158 234-420 27-190 (297)
56 PLN00129 succinate dehydrogena 96.0 0.0071 1.5E-07 69.3 5.1 69 21-101 62-135 (276)
57 PRK13905 murB UDP-N-acetylenol 95.8 0.043 9.4E-07 64.3 10.2 161 235-422 25-191 (298)
58 PRK10713 2Fe-2S ferredoxin Yfa 95.5 0.026 5.7E-07 53.3 5.6 47 13-63 3-49 (84)
59 PTZ00305 NADH:ubiquinone oxido 95.3 0.056 1.2E-06 61.8 8.4 102 7-127 62-172 (297)
60 COG0277 GlcD FAD/FMN-containin 95.2 0.038 8.3E-07 68.6 7.7 108 241-367 33-140 (459)
61 PRK07860 NADH dehydrogenase su 95.1 0.035 7.5E-07 73.7 7.1 103 12-130 3-112 (797)
62 PRK14650 UDP-N-acetylenolpyruv 94.9 0.23 4.9E-06 58.1 12.2 161 234-421 26-192 (302)
63 TIGR02008 fdx_plant ferredoxin 94.9 0.049 1.1E-06 52.9 5.6 49 13-64 4-53 (97)
64 CHL00134 petF ferredoxin; Vali 94.8 0.054 1.2E-06 52.9 5.8 48 13-63 5-54 (99)
65 TIGR01676 GLDHase galactonolac 94.7 0.055 1.2E-06 67.7 6.9 106 241-367 63-168 (541)
66 TIGR00179 murB UDP-N-acetyleno 94.6 0.21 4.6E-06 58.2 11.3 158 236-420 8-172 (284)
67 PRK11230 glycolate oxidase sub 94.6 0.061 1.3E-06 67.5 7.1 106 242-365 58-163 (499)
68 PRK13906 murB UDP-N-acetylenol 94.6 0.19 4.1E-06 59.1 10.7 154 240-421 37-195 (307)
69 PRK11183 D-lactate dehydrogena 94.4 0.077 1.7E-06 65.7 7.0 110 241-368 40-154 (564)
70 PLN02465 L-galactono-1,4-lacto 94.1 0.39 8.5E-06 60.8 12.5 158 241-422 98-262 (573)
71 TIGR00387 glcD glycolate oxida 94.0 0.06 1.3E-06 66.2 5.3 103 244-366 2-106 (413)
72 TIGR01973 NuoG NADH-quinone ox 93.9 0.1 2.3E-06 67.2 7.3 93 16-128 1-103 (603)
73 PRK09130 NADH dehydrogenase su 93.9 0.13 2.8E-06 67.2 8.0 94 13-126 1-104 (687)
74 PRK09129 NADH dehydrogenase su 93.8 0.076 1.7E-06 70.5 6.0 106 13-135 1-112 (776)
75 PLN02593 adrenodoxin-like ferr 93.8 0.15 3.4E-06 51.2 6.8 81 13-96 2-101 (117)
76 PLN03136 Ferredoxin; Provision 93.8 0.1 2.2E-06 54.5 5.5 49 13-64 56-104 (148)
77 TIGR01678 FAD_lactone_ox sugar 93.7 0.16 3.4E-06 62.9 7.9 82 241-325 16-97 (438)
78 PTZ00490 Ferredoxin superfamil 93.3 0.16 3.5E-06 52.7 6.1 85 12-98 36-138 (143)
79 PLN02805 D-lactate dehydrogena 93.3 0.1 2.3E-06 66.1 5.7 106 242-367 136-241 (555)
80 TIGR01677 pln_FAD_oxido plant- 93.3 0.51 1.1E-05 59.9 11.6 84 241-325 33-119 (557)
81 PRK11872 antC anthranilate dio 93.2 0.11 2.5E-06 62.1 5.6 47 14-63 3-52 (340)
82 PRK12436 UDP-N-acetylenolpyruv 93.2 0.54 1.2E-05 55.4 10.9 153 240-420 37-194 (305)
83 PRK08166 NADH dehydrogenase su 93.2 0.12 2.6E-06 69.3 6.3 104 13-128 1-110 (847)
84 PTZ00038 ferredoxin; Provision 92.6 0.21 4.4E-06 54.3 5.8 50 12-64 96-145 (191)
85 TIGR01679 bact_FAD_ox FAD-link 92.1 0.31 6.7E-06 60.1 7.4 103 241-367 13-115 (419)
86 TIGR02160 PA_CoA_Oxy5 phenylac 91.9 0.27 5.9E-06 59.0 6.5 52 11-64 262-313 (352)
87 PRK00046 murB UDP-N-acetylenol 91.2 1.2 2.7E-05 52.8 10.8 158 234-421 14-186 (334)
88 PRK13903 murB UDP-N-acetylenol 90.7 0.96 2.1E-05 54.4 9.4 85 234-324 26-113 (363)
89 PRK10684 HCP oxidoreductase, N 90.1 0.34 7.3E-06 57.8 5.0 48 14-64 249-296 (332)
90 PRK14649 UDP-N-acetylenolpyruv 90.1 1.2 2.7E-05 52.1 9.5 88 234-325 14-104 (295)
91 PRK07609 CDP-6-deoxy-delta-3,4 89.9 0.32 7E-06 58.1 4.6 47 12-63 3-49 (339)
92 COG0633 Fdx Ferredoxin [Energy 89.7 0.49 1.1E-05 46.5 4.8 48 16-65 7-54 (102)
93 TIGR02007 fdx_isc ferredoxin, 89.4 0.48 1E-05 47.2 4.6 42 19-65 14-56 (110)
94 TIGR01941 nqrF NADH:ubiquinone 88.7 0.47 1E-05 58.2 4.9 50 12-64 30-81 (405)
95 PRK05464 Na(+)-translocating N 88.1 0.53 1.2E-05 57.8 4.8 51 11-64 33-85 (409)
96 COG0812 MurB UDP-N-acetylmuram 86.8 6.4 0.00014 45.8 12.1 158 235-422 15-182 (291)
97 COG1034 NuoG NADH dehydrogenas 86.7 0.77 1.7E-05 59.2 5.2 94 13-126 1-103 (693)
98 PRK14651 UDP-N-acetylenolpyruv 86.6 3.8 8.1E-05 47.5 10.2 153 234-422 14-169 (273)
99 PRK05713 hypothetical protein; 86.5 0.91 2E-05 53.7 5.4 44 15-63 3-46 (312)
100 TIGR03194 4hydrxCoA_A 4-hydrox 86.4 4.6 0.0001 53.5 12.2 58 787-844 443-511 (746)
101 PLN02441 cytokinin dehydrogena 86.4 1.9 4.2E-05 54.3 8.3 82 242-324 67-155 (525)
102 PRK11282 glcE glycolate oxidas 85.7 1.7 3.6E-05 52.2 7.0 100 249-367 4-103 (352)
103 COG3383 Uncharacterized anaero 85.0 1.5 3.3E-05 55.6 6.2 98 12-127 4-106 (978)
104 PRK14648 UDP-N-acetylenolpyruv 84.2 2.3 4.9E-05 50.8 7.1 89 234-324 23-114 (354)
105 PRK09970 xanthine dehydrogenas 82.8 9 0.00019 51.0 12.6 60 785-844 457-528 (759)
106 KOG2282 NADH-ubiquinone oxidor 80.6 2.8 6.1E-05 50.9 5.9 106 5-127 24-135 (708)
107 TIGR02416 CO_dehy_Mo_lg carbon 73.0 7.2 0.00016 52.0 7.4 56 789-844 476-542 (770)
108 TIGR02965 xanthine_xdhB xanthi 70.0 6.5 0.00014 52.3 6.0 58 787-844 446-514 (758)
109 TIGR03313 Se_sel_red_Mo probab 69.0 8.3 0.00018 52.4 6.7 59 786-844 658-727 (951)
110 PRK09800 putative hypoxanthine 68.5 12 0.00025 51.1 7.9 59 786-844 662-731 (956)
111 PLN00192 aldehyde oxidase 65.9 2.5E+02 0.0054 40.2 20.1 124 1053-1228 761-888 (1344)
112 TIGR03311 Se_dep_Molyb_1 selen 56.0 18 0.00039 48.8 6.3 70 788-860 594-674 (848)
113 TIGR02969 mam_aldehyde_ox alde 55.8 21 0.00046 50.4 7.1 59 786-844 1015-1084(1330)
114 PF02738 Ald_Xan_dh_C2: Molybd 53.7 28 0.0006 44.6 7.2 57 1053-1128 48-104 (547)
115 PLN02906 xanthine dehydrogenas 53.3 29 0.00063 49.1 7.8 59 786-844 1010-1079(1319)
116 TIGR03196 pucD xanthine dehydr 52.7 29 0.00063 46.3 7.4 61 1053-1132 182-242 (768)
117 PF02594 DUF167: Uncharacteris 48.0 62 0.0014 30.2 6.6 53 1057-1117 17-69 (77)
118 TIGR01372 soxA sarcosine oxida 46.6 46 0.001 45.8 8.1 80 11-101 10-99 (985)
119 PRK07440 hypothetical protein; 46.4 24 0.00053 32.2 3.7 30 12-45 3-32 (70)
120 PRK00054 dihydroorotate dehydr 44.2 9.8 0.00021 43.4 1.0 16 48-63 214-229 (250)
121 cd06192 DHOD_e_trans_like FAD/ 40.9 16 0.00036 41.3 2.1 17 47-63 212-228 (243)
122 COG2104 ThiS Sulfur transfer p 40.9 36 0.00079 31.0 3.8 31 12-46 1-31 (68)
123 PRK06083 sulfur carrier protei 40.9 36 0.00078 32.3 4.0 34 8-45 13-46 (84)
124 PRK08053 sulfur carrier protei 37.7 68 0.0015 28.8 5.1 28 14-45 1-28 (66)
125 PF10437 Lip_prot_lig_C: Bacte 37.2 1E+02 0.0022 29.0 6.6 43 470-515 26-68 (86)
126 KOG4730 D-arabinono-1, 4-lacto 35.5 59 0.0013 39.8 5.5 81 242-325 52-132 (518)
127 TIGR02911 sulfite_red_B sulfit 34.9 15 0.00033 42.2 0.6 28 34-62 205-240 (261)
128 PRK05863 sulfur carrier protei 34.4 44 0.00096 29.9 3.4 28 14-45 1-28 (65)
129 KOG3049 Succinate dehydrogenas 34.2 22 0.00048 38.8 1.6 64 22-96 67-134 (288)
130 PF10418 DHODB_Fe-S_bind: Iron 33.1 26 0.00056 28.5 1.5 17 48-64 3-19 (40)
131 PRK05659 sulfur carrier protei 30.2 55 0.0012 29.1 3.3 27 15-45 2-28 (66)
132 COG3894 Uncharacterized metal- 28.1 58 0.0013 40.4 3.8 47 14-66 4-51 (614)
133 COG2871 NqrF Na+-transporting 27.3 61 0.0013 37.3 3.6 50 12-64 35-86 (410)
134 PRK08221 anaerobic sulfite red 26.1 25 0.00053 40.6 0.4 17 46-62 226-242 (263)
135 PRK07696 sulfur carrier protei 25.5 81 0.0018 28.5 3.5 29 14-45 1-29 (67)
136 PRK13904 murB UDP-N-acetylenol 25.2 1.1E+02 0.0024 35.2 5.4 73 235-324 13-86 (257)
137 PRK08364 sulfur carrier protei 24.0 1E+02 0.0022 28.1 3.9 31 13-45 4-36 (70)
138 TIGR01683 thiS thiamine biosyn 23.4 1.4E+02 0.003 26.6 4.5 26 16-45 1-26 (64)
139 cd06220 DHOD_e_trans_like2 FAD 22.5 40 0.00087 37.9 1.1 16 48-63 200-215 (233)
140 PF02594 DUF167: Uncharacteris 20.7 2.2E+02 0.0047 26.7 5.4 43 790-832 17-64 (77)
141 cd06221 sulfite_reductase_like 20.4 39 0.00085 38.6 0.5 17 46-62 224-240 (253)
No 1
>PLN00192 aldehyde oxidase
Probab=100.00 E-value=1.2e-269 Score=2635.38 Aligned_cols=1330 Identities=76% Similarity=1.199 Sum_probs=1159.4
Q ss_pred cccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcC
Q 000629 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVN 89 (1383)
Q Consensus 10 ~~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 89 (1383)
++++|+|+|||+++++++++|++|||+|||++++|||||+||++|+||||||+|+++|+.++++++++|||||+|++++|
T Consensus 2 ~~~~i~~~vNg~~~~~~~~~p~~~Ll~~LR~~~~ltgtK~gC~~G~CGaCtV~v~~~~~~~~~~~~~~v~sCl~~~~~~~ 81 (1344)
T PLN00192 2 SNMSLVFAVNGERFELSSVDPSTTLLEFLRTQTPFKSVKLGCGEGGCGACVVLLSKYDPVLDQVEDFTVSSCLTLLCSVN 81 (1344)
T ss_pred CcceEEEEECCEEEEeccCCCCCcHHHHHHHhhCCCCcCCCCCCCcCCCcEEEEeeccccccCcCCcEEehHHHHHHHhC
Confidence 45679999999999997699999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccc
Q 000629 90 GCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCR 169 (1383)
Q Consensus 90 g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCR 169 (1383)
|++|+|||||+++++.||||||+|+++||+|||||||||||+||+||+++....+|+|+.+...+|++||+++|+|||||
T Consensus 82 g~~i~TvEgl~~~~~~lhpvq~a~~~~~~~QCGfCtpG~vms~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCR 161 (1344)
T PLN00192 82 GCSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMCISLFSALVNADKTDRPEPPSGFSKLTVVEAEKAVSGNLCR 161 (1344)
T ss_pred CCEEEeecCcCCCCCCCCHHHHHHHHcCCCccCCCChHHHHHHHHHHHhcccccCCCcccccCCCCHHHHHHHhcCCcee
Confidence 99999999998656789999999999999999999999999999999652100113331111234799999999999999
Q ss_pred cCCChhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccc--cCCceeecCCceEEecC
Q 000629 170 CTGYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKE--NSSAMLLDVKGSWHSPI 247 (1383)
Q Consensus 170 Ctgy~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~~~~~~~~~~~~~~~P~ 247 (1383)
|||||||++|+++++.+.++++++.++|++++++.....+++++|++++++|+| |+|+.. ....+.+..+++|++|+
T Consensus 162 CtgY~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~ 240 (1344)
T PLN00192 162 CTGYRPIVDACKSFAADVDIEDLGLNSFWKKGESEEAKLSKLPPYNHSDHICTF-PEFLKKEIKSSLLLDSSRYRWYTPV 240 (1344)
T ss_pred CCCCHHHHHHHHHHHhhccchhcccccccccCCcchhhhhhcccCCCccccccC-hhhhhcccCccceecCCCceEECcC
Confidence 999999999999999877777766455655332223344688999999998889 666532 22234444589999999
Q ss_pred CHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhh
Q 000629 248 SVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETK 327 (1383)
Q Consensus 248 sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~ 327 (1383)
||+||+++|+++.. ..+++++||||||+++++....|+.+|||++|+||+.|+.++++|+|||+|||++++++++..
T Consensus 241 sl~ea~~ll~~~~~-~~~~a~lvAGgTdl~~~k~~~~p~~lIdi~~I~EL~~I~~~~~~l~IGA~vTl~el~~~l~~~-- 317 (1344)
T PLN00192 241 SVEELQSLLESNNF-DGVSVKLVVGNTGTGYYKDEELYDKYIDIRHIPELSMIRRDEKGIEIGAVVTISKAIEALREE-- 317 (1344)
T ss_pred CHHHHHHHHHhCCC-CCCCeEEEEeCCcceeeeccCCCCeEEEcCCChhhhcEEecCCEEEEeecCcHHHHHHHHHhh--
Confidence 99999999995411 024899999999999987656789999999999999999999999999999999999987654
Q ss_pred hhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhccCCCC
Q 000629 328 EFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPL 407 (1383)
Q Consensus 328 ~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~~~~L 407 (1383)
..++ .++|.|.+++++|||+||||+||||||||++||.+++||++|+|+||||+|+|.+.+|+|+||++|||.++.+
T Consensus 318 ~~~~---~~~p~L~~~~~~vAs~qIRN~aTlGGNI~~Asp~~p~sD~~p~LlAl~A~v~l~s~~g~R~vpl~dFf~~~~l 394 (1344)
T PLN00192 318 SKSE---YVFKKIADHMEKIASRFVRNTGSIGGNLVMAQRKQFPSDIATILLAAGSTVNIQNASKREKLTLEEFLERPPL 394 (1344)
T ss_pred cccc---chHHHHHHHHHHhcChhhccceechhhhcccCCCCCchhHHHHHHHhCcEEEEEeCCceEEEeHHHHhccCcc
Confidence 1111 1589999999999999999999999999999986567999999999999999999999999999999998889
Q ss_pred CCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCC-c
Q 000629 408 DSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGT-K 486 (1383)
Q Consensus 408 ~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~-~ 486 (1383)
++||||++|.||.+... ++.+.+.+|..||+++||+++|||+||+||.++++.....++++|+++||+||||++ +
T Consensus 395 ~~~Eil~~I~iP~~~~~----~~~~~~~~f~~yk~~~Rr~~~diA~V~aA~~v~~~~~~~~~~~~i~~aria~Ggvap~~ 470 (1344)
T PLN00192 395 DSKSLLLSVEIPSWTSS----SGSDTKLLFETYRAAPRPLGNALPYLNAAFLAEVSQDASSGGIVVNDCRLAFGAYGTKH 470 (1344)
T ss_pred CCcceEEEEEccCCccc----cccCcccceeeeeecccccccchhhheeeEEEEEEecccCCCCeEeEEEEEEecCCCCc
Confidence 99999999999965420 001125788899999995589999999999999852100013489999999999999 7
Q ss_pred ccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCCCcHHHHhHHHHHHHHHHHHHhhhhcc-CCCccccCCCCCCC
Q 000629 487 HAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKN-GISRDWLCGYSNNV 565 (1383)
Q Consensus 487 ~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~~s~eYR~~la~~L~~r~l~~~~~~~~-~~~~~~~~~~~~~~ 565 (1383)
|+|+.++|++|.||+|+++++++|++++.+++.|.++.+|++||+.|+.+|++|||+++++++. ..++.+.-+.
T Consensus 471 -P~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~p~~~~~s~eYRr~la~~l~~r~~~~~~~~~~~~~~~~~~~~~---- 545 (1344)
T PLN00192 471 -AIRARKVEEFLTGKVLSDSVLYEAVRLLKGIVVPEDGTSHPEYRSSLAVGFLFDFLSPLIESNAKSSNGWLDGGS---- 545 (1344)
T ss_pred -eecHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccccccccccccc----
Confidence 9999999999999999999999999999999999988899999999999999999999997762 1222221000
Q ss_pred ccccccccccccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCC
Q 000629 566 SLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPL 645 (1383)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~ah 645 (1383)
..++.+ ..+ ....+++|++++.|.|++.+++++||++++|+|+.+|+||+++|++|++.+|||||++|||||++|
T Consensus 546 ~~~~~~---~~~--~~~~~~~~~~~~~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ah 620 (1344)
T PLN00192 546 NTKQNP---DQH--DDVKKPTLLLSSKQQVEENNEYHPVGEPIKKVGAALQASGEAVYVDDIPSPKNCLYGAFIYSTKPL 620 (1344)
T ss_pred cccccc---ccc--ccccccCCCCCcceeeecccccCcCCCCCcChhhHhhcccceecccccCCCCCCEEEEEEecCCCc
Confidence 000000 011 134688999999999998899999999999999999999999999999756899999999999999
Q ss_pred cEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEc
Q 000629 646 ARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYE 725 (1383)
Q Consensus 646 a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~ 725 (1383)
|+|++||+++|+++|||++|+|++|+|..+.+++......++|+|++++|||+|||||+|||+|+++|++|+++|+|+|
T Consensus 621 ArI~sID~s~A~~~pGV~aV~t~~Dip~~~~~~g~~~~~~~~~~la~~~Vr~~Gq~Va~VvA~t~~~A~~Aa~~V~VeY- 699 (1344)
T PLN00192 621 ARVKGIKFKSNLVPQGVLAVITFKDIPKGGQNIGSKTIFGPEPLFADEVTRCAGQRIALVVADTQKHADMAANLAVVEY- 699 (1344)
T ss_pred eEEEEEEhHHhhcCCCcEEEEchHHcCcccccCCCCCCCCCceeccCCEEEEcCCeEEEEEECCHHHHHHHhccCEEEE-
Confidence 9999999999999999999999999984233333221235889999999999999999999999999999999999999
Q ss_pred cCC--CCCCccCHHHHhhcCCCcccCCccccCCCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEE
Q 000629 726 MGN--LEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVV 803 (1383)
Q Consensus 726 ~e~--l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V 803 (1383)
|+ |.|+++|+++|++++++++.+........||++++|++|+++|+|++|++++|+|+||||++|+|+|++||+|+|
T Consensus 700 -e~~~l~p~v~~i~~Al~~~s~~~~~~~~~~~~~GD~~~af~~a~~vv~e~~~~~~~q~H~~mEp~~~vA~~~~dg~l~V 778 (1344)
T PLN00192 700 -DTENLEPPILTVEDAVKRSSLFEVPPFLYPKPVGDISKGMAEADHKILSAEIKLGSQYYFYMETQTALALPDEDNCIVV 778 (1344)
T ss_pred -ecCCCCCcccCHHHHhcCCCCcccChhhcccccCCHHHHhccCCeEEEEEEEEECCEeeeeccCceEEEEEcCCCCEEE
Confidence 64 338899999999998865322222235689999999999997459999999999999999999999998888999
Q ss_pred EeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCce
Q 000629 804 YSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPM 883 (1383)
Q Consensus 804 ~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~ 883 (1383)
|+|||+|+.+|..||++||||++||||+++++|||||+|......+++.||++|+++||||||+|||+|+|.++++|||+
T Consensus 779 ~~sTQ~p~~~r~~vA~~Lgip~~~VrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVr~~~sR~Edm~~~~~R~~~ 858 (1344)
T PLN00192 779 YSSTQCPEYVHSVIARCLGIPEHNVRVITRRVGGGFGGKAVKSMPVATACALAAFKLQRPVRMYLNRKTDMIMAGGRHPM 858 (1344)
T ss_pred EECCCCHHHHHHHHHHHhCCChHHEEEEecccccCCCccccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCce
Confidence 99999999999999999999999999999999999999987667788999999999999999999999999999999999
Q ss_pred EEEEEEEECCCCcEEEEEEEEEecCCCCCCCCCchhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHH
Q 000629 884 KITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIA 963 (1383)
Q Consensus 884 ~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~ 963 (1383)
.++||+|+|+||+|++++++++.|+|+|.+++.++...+.+..++|+|||++++++.|+||++|+|||||||.||++|++
T Consensus 859 ~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~ 938 (1344)
T PLN00192 859 KITYSVGFKSDGKITALHLDILINAGISPDISPIMPRNIIGALKKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIA 938 (1344)
T ss_pred EEEEEEEECCCCCEEEEEEEEEEecccCCCcchHHHHHHhhcCCCcCCCceEEEEEEEECCCCCCCcccCCCHHHHHHHH
Confidence 99999999999999999999999999998776554555556779999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccCCHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceece
Q 000629 964 EAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVC 1043 (1383)
Q Consensus 964 E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia 1043 (1383)
|++||++|++|||||+|||++|+++++....||+++.|...+..+++||+++++.++|++|++++++||+.++|+|||+|
T Consensus 939 E~~mD~lA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGig 1018 (1344)
T PLN00192 939 EAIIEHVASTLSMDVDSVRKINLHTYESLKLFYGDSAGEPSEYTLPSIWDKLASSSEFKQRTEMVKEFNRSNKWKKRGIS 1018 (1344)
T ss_pred HHHHHHHHHHhCcCHHHHHHhcCCCccccccCCCCcccccCCCcHHHHHHHHHHhcChHHHHHHHHHHhhcCCceEEEEE
Confidence 99999999999999999999999987655446666555443349999999999999999999888889999999999999
Q ss_pred ecceEeeccCCCcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCc
Q 000629 1044 RLPIVHEVTLRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGF 1123 (1383)
Q Consensus 1044 ~a~~~~g~~~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~ 1123 (1383)
++++.|++++.++.+.|+|++||+|+|.+|++|||||++|+++||||++||+++++...=|+|+|+|..+||+.+||+++
T Consensus 1019 ~~~~~~~~~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~T~~aQiaA~~LGi~~~~~~~ip~e~I~v~~~dT~~~p~~~~ 1098 (1344)
T PLN00192 1019 RVPIVHEVMLRPTPGKVSILSDGSIAVEVGGIEIGQGLWTKVKQMAAFGLGMIKCDGGEDLLDKIRVIQSDTLSMIQGGF 1098 (1344)
T ss_pred EEEEEEeccccCCceEEEEeCCceEEEEECCCCCCCCHHHHHHHHHHHHhCCccccccCCChhhEEEEecCCCCCCCCCC
Confidence 99999999888899999999999999999999999999999999999999942221111189999999999999999999
Q ss_pred CcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHhhcCceeEEEEeeccCCCcccccceeEEEEEE
Q 000629 1124 TAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEV 1203 (1383)
Q Consensus 1124 t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~~~~~~~~~~~~~~~a~~~~~~l~a~~~~~~~~~~~~~~~~ga~~aEV 1203 (1383)
|+|||+|+++|+||++||++|++||+++++++...++.++|.+++..++..+++|+++++|.+....+.||+||++++||
T Consensus 1099 t~gSr~t~~~G~Av~~Ac~~l~~rl~~~a~~~~~~~~~~~~~~~~~~a~~~~~~L~a~~~~~~~~~~~~y~~~ga~~~eV 1178 (1344)
T PLN00192 1099 TAGSTTSESSCEAVRLCCVILVERLKPIKERLQEQMGSVTWDMLISQAYMQSVNLSASSYYTPDPSSMEYLNYGAAVSEV 1178 (1344)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHhcCCCCCeEEEEEECCCCCCccccceeEEEEEE
Confidence 99999999999999999999999999999888666678999999988876667899999997642234578999999999
Q ss_pred EEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEE
Q 000629 1204 EVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVE 1283 (1383)
Q Consensus 1204 EVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~ 1283 (1383)
|||++||+++|+|+++++|||++|||.+++|||||||+|||||+|+||+.||++|+++|++||||+||++.|||.+|+|.
T Consensus 1179 EVD~~TG~v~vlr~~~~~D~G~~INP~i~~GQIeGg~vqGiG~al~Ee~~yd~~G~llt~~~~dY~iPt~~DiP~~~~v~ 1258 (1344)
T PLN00192 1179 EVDLLTGETTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVVTDGTWTYKIPTVDTIPKQFNVE 1258 (1344)
T ss_pred EEecCCCcEEEEEEEEEEecCcccCHHHHHHHHHHHHHHHHhHHhceeEEECCCCCCCCCChhhcCCCcccccCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999559999
Q ss_pred EecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCC----CCceeecCCCCChHHHHHhcCCChH
Q 000629 1284 ILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNG----SDFTVNLEVPATMPVVKELCGLDSV 1359 (1383)
Q Consensus 1284 ~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g----~~~~~~~~~P~Tpe~I~~al~~~~~ 1359 (1383)
+++++.+|.||||+||+||+|+++++++++||+|||++|+.++. +.| ....+..+.|+|||||+++|+++..
T Consensus 1259 ~~e~~~~~~~p~gaKgvGE~~~~~~~~v~~Ai~~Ai~~Ar~~~~----~~g~~~~~~~~~~l~~pat~e~i~~~~~~~~~ 1334 (1344)
T PLN00192 1259 ILNSGHHKKRVLSSKASGEPPLLLAASVHCATRAAIREARKQLL----SWGGIDGSDSTFQLPVPATMPVVKELCGLDVV 1334 (1344)
T ss_pred EEeCCCCCCCCCccccCccCcccccHHHHHHHHHHHHHHHhhhc----ccCCcccCCCceecCCCCChHHHHHhcCChHH
Confidence 99987678899999999999999999999999999999998620 013 5557889999999999999999888
Q ss_pred HHHHHhH
Q 000629 1360 EKYLQWR 1366 (1383)
Q Consensus 1360 ~~~~~~~ 1366 (1383)
+.++.++
T Consensus 1335 ~~~~~~~ 1341 (1344)
T PLN00192 1335 ERYLEWK 1341 (1344)
T ss_pred HHhhhhh
Confidence 8777765
No 2
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=100.00 E-value=1.8e-262 Score=2564.92 Aligned_cols=1266 Identities=32% Similarity=0.522 Sum_probs=1118.9
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCce
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCL 92 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 92 (1383)
.|+|+|||+++++.+++|+++||+|||+++||||||.||++|+||||||+|+++|+.++++++++|||||+|+++++|++
T Consensus 2 ~~~~~~Ng~~~~~~~~~~~~~ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 81 (1330)
T TIGR02969 2 ELLFYVNGRKVVEKNVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYNPSTKSIRHHPVNACLTPICSLYGAA 81 (1330)
T ss_pred cEEEEECCEEEEeccCCCCCcHHHHHHhhcCCCCCCCCcCCCCCCCcEEEECCccccccccCCcEEehhHHHHHHhCCCE
Confidence 58999999999765689999999999999999999999999999999999999999889999999999999999999999
Q ss_pred eEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCC
Q 000629 93 ITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTG 172 (1383)
Q Consensus 93 i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtg 172 (1383)
|+|||||++.++.|||||+||+++|++|||||||||||++++||++ +|+|+ ++||+++|+||||||||
T Consensus 82 v~TvEgl~~~~~~l~pvq~a~~~~~~~QCGfCtpG~vm~~~~ll~~-----~~~p~-------~~~i~~~l~gnlCRCtg 149 (1330)
T TIGR02969 82 VTTVEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMSMYALLRN-----HPEPT-------LDQLTDALGGNLCRCTG 149 (1330)
T ss_pred EEecCCcCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHc-----CCCCC-------HHHHHHHhcCCcccCCC
Confidence 9999999864568999999999999999999999999999999954 56664 99999999999999999
Q ss_pred ChhHHHHHHHhhhccc--cccccccccc-c--cC--Cc--------ccccccCCCCCCCCCcccCCCccccccc---CCc
Q 000629 173 YRPIADACKSFAADVD--IEDLGINSFW-A--KG--ES--------KEVKISRLPPYKHNGELCRFPLFLKKEN---SSA 234 (1383)
Q Consensus 173 y~~i~~a~~~~a~~~~--~~~~~~~~c~-~--~~--~~--------~~~~~~~~~~~~~~~~~~~~p~~l~~~~---~~~ 234 (1383)
|++|++|+++++.+.. +++++.+||+ + ++ ++ ..++.+.+.++++.++ .+||++|.... +..
T Consensus 150 Y~~i~~a~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~fp~~l~~~~~~~~~~ 228 (1330)
T TIGR02969 150 YRPIIDACKTFCKTSGCCQSKENGVCCLDQGINGLPEFEEGDETSPELFSEEEFLPLDPTQE-LIFPPELMRMAEKQPQR 228 (1330)
T ss_pred CHHHHHHHHHHhhccCCchhccccCccccccccccccccccccccccccchhcccCCCcccc-ccCChhHhhcccccccc
Confidence 9999999999997643 2333334554 1 11 00 1112235566777765 48999987531 122
Q ss_pred -eeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eee-cccCceEEecCCCccccceeecCCcEEEc
Q 000629 235 -MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIG 310 (1383)
Q Consensus 235 -~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~L~IG 310 (1383)
+.+.+ +.+|++|+||+||+++|+ ++|++++|||||||++ ++. ...++.+|||++|+||+.|+.++++|+||
T Consensus 229 ~~~~~~~~~~~~~P~tl~ea~~ll~-----~~~~a~lvAGGTdl~~~~k~~~~~~~~lIdi~~I~EL~~i~~~~~~l~IG 303 (1330)
T TIGR02969 229 TRVFYSERMMWISPVTLKELLEAKF-----KYPQAPVVMGNTSVGPEVKFKGVFHPVIISPDRIEELSVVNHTGDGLTLG 303 (1330)
T ss_pred eeeecCCCceEECCCCHHHHHHHHH-----hCCCCEEEecCcchHHHhhhccCCCCeEEECCCChhhhcEEEcCCEEEEe
Confidence 55655 689999999999999999 4689999999999998 444 25778999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeC
Q 000629 311 ATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTG 390 (1383)
Q Consensus 311 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~ 390 (1383)
|+|||++|++.|.+.+.++++.....+|.|++++++|||+||||+||||||||++||+ ||++|+|+||||+|+|.+.
T Consensus 304 A~vT~~el~~~l~~~i~~~p~~~~~~~p~L~~a~~~ias~qIRN~gTlGGNi~~asP~---sD~~p~LlAl~A~v~l~s~ 380 (1330)
T TIGR02969 304 AGLSLAQVKDILADVVQKLPEETTQTYRALLKHLGTLAGSQIRNMASLGGHIISRHLD---SDLNPLLAVGNCTLNLLSK 380 (1330)
T ss_pred ccccHHHHHHHHHHhhhcCchhhhHHHHHHHHHHHHhCChhhcccccchhhcccCCCc---hhHHHHHHHcCcEEEEecC
Confidence 9999999999888776656665567899999999999999999999999999999999 9999999999999999999
Q ss_pred CceEEEehhhhcc----CCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCC
Q 000629 391 QKCEKLMLEEFLE----RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCK 466 (1383)
Q Consensus 391 ~g~R~v~l~dF~~----~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~ 466 (1383)
+|+|+||++|||. +++|+++|||++|.||.+.. +..+.+||+++| +++|||+||+||.+++++
T Consensus 381 ~g~R~vpl~dff~~~~~~t~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~dia~V~~A~~v~l~~-- 447 (1330)
T TIGR02969 381 EGKRQIPLSEQFLSKCPDADLKPQEILVSVNIPYSRK----------WEFVSAFRQAQR-QQNALAIVNSGMRVFFGE-- 447 (1330)
T ss_pred CceEEEehHHhhhcccccccCCCCceEEEEEecCCCC----------ccceeEEEEcCC-ccccHHHhhheEEEEEEc--
Confidence 9999999999883 78999999999999997643 456789999999 799999999999999951
Q ss_pred CCCCceeeeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCC-CCC-CCcHHHHhHHHHHHHHHHHH
Q 000629 467 TGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVP-EDG-TSIPAYRSSLAVGFLYEFFG 544 (1383)
Q Consensus 467 ~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p-~~~-~~s~eYR~~la~~L~~r~l~ 544 (1383)
++++|+++||+||||+++ |+|+.++|++|.||+|+++++++|.+++.+++.| .++ ++|++||+.|+.+||+|||+
T Consensus 448 --~~~~i~~aria~Ggvap~-p~ra~~~E~~L~Gk~~~~~~~~~A~~~l~~~~~p~~~d~r~sa~YRr~la~~ll~kf~~ 524 (1330)
T TIGR02969 448 --GDGIIRELSISYGGVGPT-TICAKNSCQKLIGRPWNEEMLDTACRLILDEVSLAGSAPGGKVEFKRTLIISFLFKFYL 524 (1330)
T ss_pred --CCCEEeEEEEEEEcCcCc-eecHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 146999999999999999 9999999999999999999999999999999986 554 48999999999999999999
Q ss_pred HhhhhccCCCccccCCCCCCCccccccccccccccccccccccCCccccccccCC----CCCCCCCcccccchhhhcccc
Q 000629 545 SLTEMKNGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSR----EYYPVGEPITKSGAALQASGE 620 (1383)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vG~~~~r~d~~~kvtG~ 620 (1383)
++..+++...+.... ... .+..| ..+.+++|++++.|.|+... ..++|||+++|+|+++||||+
T Consensus 525 ~~~~~~~~~~~~~~~-------~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGk~v~r~d~~~kvtG~ 592 (1330)
T TIGR02969 525 EVSQILKRMDPGHYP-------SLA---DKYES--ALEDLHSKHHWSTLKHQNVDSMQLPQDPIGHPIMHLSGVKHATGE 592 (1330)
T ss_pred HHhhhhccccccccc-------cCC---hhhcc--ccccccCCCCccccceecccccccccCcCCCCCcChhhHhhcccc
Confidence 999877321111000 000 01122 24578899999999887422 227899999999999999999
Q ss_pred ccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCccccCCCcccccCCceeecCC
Q 000629 621 AIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQ 700 (1383)
Q Consensus 621 a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~~~~~p~la~~~Vry~Gq 700 (1383)
++|++|++.+|||||++|||||++||||++||+|+|++||||++|+|++|+| +.|. +.++|+|++++|||+||
T Consensus 593 a~Y~~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~~V~t~~Dvp--~~~~-----~~~~~~la~~~Vr~~Gq 665 (1330)
T TIGR02969 593 AIYCDDMPAVDQELFLTFVTSSRAHAKIVSIDLSEALSLPGVVDIITAEHLQ--DANT-----FGTEKLLATDKVHCVGQ 665 (1330)
T ss_pred ccccCCCCCCCCCEEEEEEecCCCceEEEeeeHHHHhcCCCeEEEEeHHHCC--CCCC-----CCCeeecCCCeEEEcCC
Confidence 9999999745899999999999999999999999999999999999999998 4332 24789999999999999
Q ss_pred eEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCCcccCCccccCCCCChhhhccccCeeeEEEEEEecc
Q 000629 701 PVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGS 780 (1383)
Q Consensus 701 pVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~e~af~~A~~vvve~~~~~~~ 780 (1383)
|||+|||+|+++|++|+++|+||| |+|+|+++|+++|+++++++... ....+||++++|++|+++ ||++|++++
T Consensus 666 pva~VvAet~~~A~~Aa~~V~VeY--e~l~~~v~d~~~Al~~~a~~~~~---~~~~~Gdv~~af~~a~~v-ve~~y~~~~ 739 (1330)
T TIGR02969 666 LVCAVIADSEVQAKQAAKHVKIVY--RDLEPLILTIEEAIQHKSFFEPE---RKLEYGNVDEAFKVVDQI-LEGEIHMGG 739 (1330)
T ss_pred eEEEEEECCHHHHHHHhcCCEEEE--ecCCCCcCCHHHHhcCCCEeccc---ccccCCchhhhhccCCEE-EEEEEEECC
Confidence 999999999999999999999999 88856679999999988754311 135889999999999996 999999999
Q ss_pred cccCCCCCCceEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccHHHHHHHHHHHH
Q 000629 781 QYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYK 859 (1383)
Q Consensus 781 ~~h~~mEp~~avA~~~~-~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~ 859 (1383)
|+|+||||++|+|+|++ +|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+.....++.+|++|++
T Consensus 740 ~~H~~mEp~~~~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aA~aA~~ 819 (1330)
T TIGR02969 740 QEHFYMETQSMLVVPKGEDQEMDVYVSTQFPKYIQDIVAATLKLPVNKVMCHVRRVGGAFGGKVGKTSIMAAITAFAANK 819 (1330)
T ss_pred EeecccCCCEEEEEEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHeEEEeCCcccCcccccccccHHHHHHHHHHHH
Confidence 99999999999999984 57899999999999999999999999999999999999999999987433446889999999
Q ss_pred cCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-chhhhccccCCCCcCCcEEEEE
Q 000629 860 LCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDI 938 (1383)
Q Consensus 860 ~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~~~~~~~Y~ipn~~~~~ 938 (1383)
+||||||+|||+|+|+.+++|||+.++||+|+|+||+|++++++++.|+|+|.+.+. ++..++.+..++|+|||+++++
T Consensus 820 ~gRPVk~~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~ 899 (1330)
T TIGR02969 820 HGRAVRCTLERGEDMLITGGRHPYLGKYKAGFMNDGRIVALDVEHYSNGGSSLDESLWVIEMGLLKMDNAYKFPNLRCRG 899 (1330)
T ss_pred hCCCEEEEecHHHHhhhcCCcCceEEEEEEEECCCCCEEEEEEEEEEecccccCcchHHHHHHHHhcCCCccCCcEEEEE
Confidence 999999999999999999999999999999999999999999999999999998775 5555666778999999999999
Q ss_pred EEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHh
Q 000629 939 KVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAV 1017 (1383)
Q Consensus 939 ~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~ 1017 (1383)
+.|+||++|++||||||.||++|++|++||++|++|||||+|||+||++++++.. || |+.+++ .+++||+++++
T Consensus 900 ~~v~TN~~~~~a~RG~G~~q~~fa~E~~mD~lA~~lg~DP~e~R~~N~~~~gd~~-p~----~~~~~~~~~~~~l~~~~~ 974 (1330)
T TIGR02969 900 WACRTNLPSNTAFRGFGFPQAGLITEACITEVAAKCGLSPEKVRTINMYKEIDQT-PY----KQEINAKNLFQCWRECMA 974 (1330)
T ss_pred EEEECCCCCCCccCCCchHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCcccC-CC----CcccCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999877643 34 444444 99999999999
Q ss_pred hcCchhHHHHHHHHhhcCCCcceeceecceEeeccCC-----CcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHH
Q 000629 1018 SSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFA 1092 (1383)
Q Consensus 1018 ~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~-----~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~ 1092 (1383)
.++|++|++.++.||+.++|++||+|+++..|+++++ ++.+.|+|++||+|+|.+|++|||||++|+++||||++
T Consensus 975 ~~~~~~r~~~~~~~~~~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~ 1054 (1330)
T TIGR02969 975 KSSYSERKVAVEKFNAENYWKKRGLAVIPLKFPVGLGSVAMGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVVSRE 1054 (1330)
T ss_pred hcCHHHHHHHHHHHhccCCCeEEEEEEEEEEeccccccCCCCCccEEEEEcCCceEEEEECCcCcCCChHHHHHHHHHHH
Confidence 9999999888778888889999999999999987654 57899999999999999999999999999999999999
Q ss_pred hCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHh
Q 000629 1093 LSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAH 1172 (1383)
Q Consensus 1093 Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~~~~~~~~~~~~~~~a~ 1172 (1383)
||| |+|+|+|..+||+.+||+++|+|||+|+++|+||++||++||+||++++++. ...+|.+++..++
T Consensus 1055 LGi--------p~e~V~v~~~DT~~~p~~~gt~gSr~t~~~G~Av~~A~~~l~~rl~~~aa~~----~~~~~~~~~~~~~ 1122 (1330)
T TIGR02969 1055 LKM--------PMSNVHLRGTSTETVPNTNASGGSVVADLNGLAVKDACQTLLKRLEPIISKN----PQGTWKDWAQTAF 1122 (1330)
T ss_pred hCC--------CHHHEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CCCCHHHHHHhhc
Confidence 999 9999999999999999999999999999999999999999999999998753 2467999886666
Q ss_pred hcCceeEEEEeeccC----------CCcccccceeEEEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHh
Q 000629 1173 LQSVNLSASSMYVPD----------FTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQ 1242 (1383)
Q Consensus 1173 ~~~~~l~a~~~~~~~----------~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~q 1242 (1383)
..++.|.+.++|... +.++.||+||+|++|||||++||+++|+|+++++|||++|||.+++||||||++|
T Consensus 1123 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVEVD~~TG~v~vlr~~~v~D~G~~INP~~~~GQieGg~vq 1202 (1330)
T TIGR02969 1123 DQSISLSAVGYFRGYESNINWEKGEGHPFEYFVYGAACSEVEIDCLTGDHKNIRTDIVMDVGHSINPALDIGQVEGAFIQ 1202 (1330)
T ss_pred cCCCceEEEEEecCCcccccccCcCCCCccccceeeEEEEEEEecCCCCEEEEEEEEEEeCCcccCHHHHhHhHHHHHHH
Confidence 556788888877421 1234578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHH
Q 000629 1243 GIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 1322 (1383)
Q Consensus 1243 GiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A 1322 (1383)
|||++|+||+.||++|+++|++|+||+||++.|||.+|++++++++++|.||||+||+||+|+++++++++||+|||++|
T Consensus 1203 GiG~al~Ee~~yd~~G~~lt~~~~dY~iPt~~DiP~~~~v~~~~~~~~~~~p~GaKGvGE~~~~~a~~v~~AI~nAI~~A 1282 (1330)
T TIGR02969 1203 GMGLYTIEELSYSPQGILYSRGPNQYKIPAICDIPTELHISFLPPSEHSNTLYSSKGLGESGVFLGCSVFFAIHDAVRAA 1282 (1330)
T ss_pred HHHHHHcceeEECCCCCCCCCCcccccCCchhhcCCCEEEEEEeCCCCCCCCCccccCcccccccCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999559999998667889999999999999998778999999999999
Q ss_pred HHhhhcccccCCCCceeecCCCCChHHHHHhcCCChHHHHHH
Q 000629 1323 RKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKYLQ 1364 (1383)
Q Consensus 1323 ~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~~~~~~~~~ 1364 (1383)
++.. |..+++++++|+||||||++|..+..+.+..
T Consensus 1283 ~g~~-------g~~~~~~~~~P~Tperv~~al~~~~~~~~~~ 1317 (1330)
T TIGR02969 1283 RQER-------GLSGPWKLTSPLTPEKIRMACEDKFTKMIPR 1317 (1330)
T ss_pred Hhhc-------CCCcCccCCCCCCHHHHHHHhhhhHHHhhhc
Confidence 9754 4444678999999999999999976655554
No 3
>KOG0430 consensus Xanthine dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.1e-263 Score=2371.20 Aligned_cols=1246 Identities=45% Similarity=0.733 Sum_probs=1147.4
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCc
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC 91 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 91 (1383)
|.+.|.|||++++++.+||++||++|||++++|||||.||+||+||||||++++||+.+ ++.+++|||||+|+++++|+
T Consensus 1 ~~l~F~VNG~~~~~~~vdP~~TL~~fLR~k~~ltgtKlgC~EGGCGaCtv~ls~~dp~~-~~~~~avNsCLt~l~s~~g~ 79 (1257)
T KOG0430|consen 1 MELVFAINGKRVEVELLPPDLTLNTFLREKLGLTGTKLGCGEGGCGACTVVLSKYDPEL-KVRHWAVNSCLTLLNSVHGL 79 (1257)
T ss_pred CceEEEECCEEeeEecCCcchhHHHHHHHhcCCcceeeccCCCCccceEEEEeccCCCc-eeEEeehhhhhhhcccccce
Confidence 56899999999999999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred eeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccC
Q 000629 92 LITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCT 171 (1383)
Q Consensus 92 ~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCt 171 (1383)
+|||+||||++++++||||++|+++||+||||||||||||||+||++++ ..| |++||+++|+|||||||
T Consensus 80 ~VtT~EGlGn~~~g~HPiq~RlA~~hgsQCGFCtPG~vmsmYalL~n~~----~~~-------T~~eie~a~~GNLCRCT 148 (1257)
T KOG0430|consen 80 EVTTSEGLGNRRDGYHPIQERLAKMHGSQCGFCTPGFVMSMYALLRNSK----NSP-------TMEEIENAFGGNLCRCT 148 (1257)
T ss_pred EEEeeecccccccCcCcHHHHHhhccCCcccCCCccHHHHHHHHHHhCC----CCC-------CHHHHHHhhccceeeec
Confidence 9999999999889999999999999999999999999999999997641 133 59999999999999999
Q ss_pred CChhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccccCCceeecC-CceEEecCCHH
Q 000629 172 GYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDV-KGSWHSPISVQ 250 (1383)
Q Consensus 172 gy~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~-~~~~~~P~sl~ 250 (1383)
|||||+||+++||.+.++|+++++..|++ ++......+ ++|||+|+. +|||++....+. ..+.. +.+|++|.||+
T Consensus 149 GYRPIldA~kSFa~d~~~~~~g~~~~~~~-~~~~~~~~~-~~~dp~~~~-i~~pe~~~~~~~-~~~~~~~~~W~~P~sl~ 224 (1257)
T KOG0430|consen 149 GYRPILDAMKSFAVDSDICGPGCDGFSIA-EEKDIEDLS-PPYDPKKEL-IFPPELLKRKKT-TLLGNDGIRWYWPVSLE 224 (1257)
T ss_pred CCchHHHHHhhhccCCCccccCccccccc-ccccccccc-CCCCCccCc-ccChHHhccccc-cccCCCCcEEeCcccHH
Confidence 99999999999999999998875554544 444455556 899999976 677777765333 44444 99999999999
Q ss_pred HHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhhhc
Q 000629 251 ELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFH 330 (1383)
Q Consensus 251 e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~~~ 330 (1383)
|++++|+ +.+.++||+|||..|++++..+++.+||+++||||+.+..++++|+|||++||+++++.|++.++ .+
T Consensus 225 eL~~~~~-----~~~~~~Lv~GNT~~gv~~r~~~~~~~Id~~~v~el~~~~~~~~gi~lGa~~sls~~~~~l~~~~~-~~ 298 (1257)
T KOG0430|consen 225 ELFELKA-----NKPDAKLVAGNTAHGVYRRSPDYQKFIDVSGVPELKALNVDDNGLELGAALSLSETMELLRKLVK-RP 298 (1257)
T ss_pred HHHHHHh-----cCcceEEEeccccceEEeccCCCcceechhcCchhhhcccCCCceEEcccccHHHHHHHHHHHHh-Cc
Confidence 9999999 57999999999999998876779999999999999988889999999999999999999988765 33
Q ss_pred hhhhhhHHHHHHHHHHhcccccccccccCCccccccCC-CCCCchHHHHHhcCcEEEEEeCCc-eEEEehhhhccCCCCC
Q 000629 331 SEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK-HFPSDVATVLLGAGAMVNIMTGQK-CEKLMLEEFLERPPLD 408 (1383)
Q Consensus 331 ~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~-~~~sDl~~~LlaldA~v~i~~~~g-~R~v~l~dF~~~~~L~ 408 (1383)
. ..+|+.+.+|+++||++||||.|||||||+.+++. .||||++++|+|+||+|++.+..+ ..++.+++|.... |.
T Consensus 299 ~--~~~~~~~~~hl~~~A~~~IRN~atigGnI~~~~~~~~f~SDl~~~l~a~~a~v~~~~~~~~~~~~~l~~y~~~~-l~ 375 (1257)
T KOG0430|consen 299 G--FEYFKALWEHLKWFANVQIRNVGTIGGNICTKAQSPEFPSDLFILLEALDAKVTILNNSGDLEKVFLEEYLGSS-LG 375 (1257)
T ss_pred H--HHHHHHHHHHHHHhcccceeccccccceeEeccCCCCCchhHHHHHHhhccEEEEeecCCccceeeHhhhhccc-cC
Confidence 2 37899999999999999999999999999999985 889999999999999999998655 8899999998655 99
Q ss_pred CCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCccc
Q 000629 409 SRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHA 488 (1383)
Q Consensus 409 ~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p 488 (1383)
++|||.+|+||.+. .+|.+||+++| ++||||+||++|...+ ++|+++||+|||++|. .
T Consensus 376 ~~~illsv~ip~~~------------~~f~~~k~a~R-~e~a~a~vNa~fl~e~--------~~V~~~~i~fGg~~p~-~ 433 (1257)
T KOG0430|consen 376 AKEILLSVVLPASR------------KYFESYKQAPR-RENAIAYVNAAFLAEV--------GKVSSARICFGGIAPD-F 433 (1257)
T ss_pred cceEEEEEEccCcH------------HHHHHHHhccc-ccchhhhhhHHhhhcc--------ceeeeeeEeecCcCcc-h
Confidence 99999999999984 27889999999 6899999999887765 2899999999999999 9
Q ss_pred ccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCCCcHHHHhHHHHHHHHHHHHHhhhhccCCCccccCCCCCCCccc
Q 000629 489 IRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLK 568 (1383)
Q Consensus 489 ~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~~s~eYR~~la~~L~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1383)
+++.++|+.|.||.|+++.+++|+..|..++.|..|.++.+||++||.+||||||+.+.+..+..+ .+.+|
T Consensus 434 i~a~~~~~~~~gk~~~~~ll~~a~~lL~~~l~~~~p~~~~~yR~~La~sfffKF~l~~~~~~~~~~-~~~~g-------- 504 (1257)
T KOG0430|consen 434 IHAKKTEELLLGKPWEEELLEDAFGLLQSDLVPDEPGGMPEYRKKLALGFFFKFLLKVAHKVKNGN-KFITG-------- 504 (1257)
T ss_pred hhhhhHHHHhhcccccHHHHHHHHHhhhhhccCCCCCCcHHHHHHHHHHHHHHHHHHHhhhccccC-CccCC--------
Confidence 999999999999999999999999999999999888899999999999999999999999874221 12222
Q ss_pred cccccccccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEe
Q 000629 569 DSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARI 648 (1383)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I 648 (1383)
.....+|+.++.|.+++..+..+||+|++++.+..++||+|.|+|||+.+++.||++||.|+.|||+|
T Consensus 505 ------------~~~~~~~~ls~~Q~~~~~q~~~pVG~pi~~~~a~~qaSGEAvY~dDip~~~n~lh~aFV~St~p~A~I 572 (1257)
T KOG0430|consen 505 ------------GSLLARPLLSGGQQFETTQEHYPVGRPVEKLEALIQASGEATYVDDIPTPPNTLHAAFVLSTKPHAKI 572 (1257)
T ss_pred ------------CccccccccccceeecCCCCCCcCcchhhhhhhhhhcccceEEecCCCCCCCeeEEEEEEcccCCcEE
Confidence 12345677777888888777999999999999999999999999999999999999999999999999
Q ss_pred ccccCcccCCCCCEEEEEEcCCCCCCCCC---CCccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEc
Q 000629 649 KGIEFKSESVPDVVTALLSYKDIPEGGQN---IGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYE 725 (1383)
Q Consensus 649 ~sID~s~A~~~pGVv~Vvt~~Dip~~g~~---~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~ 725 (1383)
+|||+|+|+++|||+++++++|+| |.| ++....+.++++||+|+|+++||||++|||+|.++|++||++|+|+|
T Consensus 573 ~sID~seAl~~~GVv~~~~akDiP--g~n~~~i~~~~~~~de~lFA~~~v~~~GQ~ig~ivAdt~~~A~rAA~lVkv~Y- 649 (1257)
T KOG0430|consen 573 LSIDASEALKLPGVVAFFSAKDIP--GNNMKNIGNMFFPEDEELFATDVVTCVGQPIGVIVADTHELAKRAAKLVKVEY- 649 (1257)
T ss_pred eeecchhhcCCCceEEEEecccCC--CCCccccccccCCCccceeecceeEEcCcEEEEEEeCCHHHHHHhhhceEEEe-
Confidence 999999999999999999999999 544 22222346899999999999999999999999999999999999999
Q ss_pred cCCCCCCccCHHHHhhcCCCcccCCccccCCCCChhhhc--cccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEE
Q 000629 726 MGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGM--NEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVV 803 (1383)
Q Consensus 726 ~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~e~af--~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V 803 (1383)
++|+|+++++++|++..++++.++ .++.+++.+.| .++|.+ +|++++++.|+|||||||+++|+|++| +|.|
T Consensus 650 -~~l~p~I~t~e~Ai~~~s~~~~~~---~~~~~~~~~~~~~~~~d~i-~~Ge~~mG~QeHFYmEtQttl~vP~e~-el~v 723 (1257)
T KOG0430|consen 650 -EELPPPILPSEDAVKDKSLSETEP---RLRKGDVGKSFQLEECDKI-LEGELDMGGQEHFYMEPQTTLVVPFEG-ELQV 723 (1257)
T ss_pred -ccCCCceecHHHHHhhhcccCCCc---cccccCcccccccccccee-EEEEEEecceeEEEeccceeEEeecCC-eEEE
Confidence 889888999999999988765333 35566655555 567885 999999999999999999999999977 8999
Q ss_pred EeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCce
Q 000629 804 YSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPM 883 (1383)
Q Consensus 804 ~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~ 883 (1383)
|+|||||..+|..||++||||.|||+|+++|+|||||||..+..+++++|||+|+|++||||.+++|++||.++|+|||+
T Consensus 724 ~~STQ~~~~tQ~~VA~~Lgipa~~V~v~trRvGGGFGGK~trs~~VA~a~ALaA~Kl~RPvr~~l~r~~dM~itG~Rhp~ 803 (1257)
T KOG0430|consen 724 YSSTQWPDFTQSVVAHVLGLPANKVQVKTRRLGGGFGGKETRSNPVAAAAALAAYKLNRPVRFVLSRESDMIITGKRHPF 803 (1257)
T ss_pred EEcCcCcHHHHHHHHHHhCCCccceEEEEEeeccccccccccccHHHHHHHHHHHHhCCCEEEEecchhhhhhcCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEECCCCcEEEEEEEEEecCCCCCCCCCchhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHH
Q 000629 884 KITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIA 963 (1383)
Q Consensus 884 ~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~ 963 (1383)
+.+||+|+++||||+|++.++|.|+|+..+.|+++.++++++.++|++||+|+++++|+||.|+++||||||.||++++.
T Consensus 804 ~~~Ykvgf~~~GkI~aL~~~~~~naG~s~d~S~~~~~~~~~~~n~Y~~~~~r~~G~~ckTN~pSnTa~Rg~G~pQG~~i~ 883 (1257)
T KOG0430|consen 804 HGKYKVGFKSDGKILALDLEFYENAGWSKDESPSVLRAMFHSDNVYEIGDVRFDGYVCKTNLPSNTAFRGPGSPQGILIT 883 (1257)
T ss_pred EEeEEEEEccCCeEEEEehhhhhccCCCcCcchHHHhhhhhhhheecccceeeeeeEEecCCCCcchhcCCCChhhHHHH
Confidence 99999999999999999999999999999999966689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccCCHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceece
Q 000629 964 EAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVC 1043 (1383)
Q Consensus 964 E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia 1043 (1383)
|++|.++|.++|+||.|+|++|+++.++.+. + .|....+.+++||+++.+.++|++|++++++||+.|+||||||+
T Consensus 884 E~iie~VA~~~g~d~eeVR~~N~y~eg~~~~-~---~~~~~~~~l~~~w~~~~~sS~y~~Rk~ev~~FN~~N~WrKRGi~ 959 (1257)
T KOG0430|consen 884 ENIIERIAFELGKDPEEVRKINFYVEGSLTY-Y---HGELQHCTLPQLWPECLVSSKFEKRKSEIEEFNKENRWKKRGLA 959 (1257)
T ss_pred HHHHHHHHHHhCCCHHHHhhhhhhhcccccc-c---CCCcccCcHHHHHHHHHHhchHHHHHHHHHHhhhcChhhhcCce
Confidence 9999999999999999999999999887653 2 14455569999999999999999999999999999999999999
Q ss_pred ecceEeeccCCC-cceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCC
Q 000629 1044 RLPIVHEVTLRS-TPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGG 1122 (1383)
Q Consensus 1044 ~a~~~~g~~~~~-~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~ 1122 (1383)
+.|+.|++++.. ..++|.|+.||||.|.||++|||||++||++|+||+.||| |++.|++.++||+.+||++
T Consensus 960 ~vp~~f~i~~~~~~~a~V~Iy~DGSV~v~hgGiEmGQGL~TK~~Qvaa~~l~i--------p~~~v~v~~tsT~~v~na~ 1031 (1257)
T KOG0430|consen 960 MVPMKFGISFTGQAPALVHIYTDGTVVVTHGGIEMGQGLNTKVAQVAAYALGI--------PLSSVFVSETSTDKVPNAS 1031 (1257)
T ss_pred EeeeecceeccCCCceEEEEEcCCeEEEEECcEEcccchhHHHHHHHHHHhCC--------cccceEEeecccccccCCC
Confidence 999999999875 9999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cCcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHhhcCceeEEEEeeccCCCcccccceeEEEEE
Q 000629 1123 FTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSE 1202 (1383)
Q Consensus 1123 ~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~~~~~~~~~~~~~~~a~~~~~~l~a~~~~~~~~~~~~~~~~ga~~aE 1202 (1383)
.|+||.++++.|.||+.||++|.+||+|+..++. ..+|.+++.+||.+.++|+++.+|+++++++.|++||++++|
T Consensus 1032 ~Ta~S~~Sd~~g~AV~~~C~~l~~RL~Pv~~k~~----~~tw~~~i~~AY~q~V~LsAs~~~~~~g~~~~Y~~yG~a~sE 1107 (1257)
T KOG0430|consen 1032 PTAASVSSDMYGAAVLDACETINARLEPVKSKHN----FNTWEELIQAAYGQSINLSASDWYKPEGDMFPYLTYGAAASE 1107 (1257)
T ss_pred ccccccccccccHHHHHHHHHHHHhhhhhhhhcC----CccHHHHHHHHhhCccceeeeccccCCCCcccceeccceeEE
Confidence 9999999999999999999999999999988543 479999999999999999999999998899999999999999
Q ss_pred EEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEE
Q 000629 1203 VEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNV 1282 (1383)
Q Consensus 1203 VEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v 1282 (1383)
||||++||.++|+|+++++|||.++||.++.|||||+|+||+|+.++||+.||++|+++|++.|+||||++.|||.+|+|
T Consensus 1108 VEID~LTG~~~ilRtDIv~D~G~SLNPaIDIGQIEGAFvQGlG~~t~Eel~~~~~G~l~t~gt~~YKiP~~~dIP~~FrV 1187 (1257)
T KOG0430|consen 1108 VEIDTLTGDTEVLRVDILYDCGESLNPAIDIGQIEGAFVQGLGLVTLEELIYDPEGSLLTNGTWTYKIPGAKDIPKDFRV 1187 (1257)
T ss_pred EEEEEecCcceEEEEEEeeecccccCcccccchhhhHHHhchhhhhhhhheeCCCceEeecCCCcccCCCcccCchheEe
Confidence 99999999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred EEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcCCChHHHH
Q 000629 1283 EILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVEKY 1362 (1383)
Q Consensus 1283 ~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~~~~~~~ 1362 (1383)
+++...+++.++++||++||||+++++++++||++||.+|+.+ |+..+.|+|||+|+++|++...+.+
T Consensus 1188 ~LL~~~pn~~~v~sSKA~GEPPl~La~sv~fAi~~Ai~aAR~~------------~f~L~~PaTpe~i~~~c~~~~~~~~ 1255 (1257)
T KOG0430|consen 1188 ELLNKNPNKAGVMSSKATGEPPLFLAASVFFAIRQAIKSARKD------------WFRLEAPATPERIRLACGDEFSEFK 1255 (1257)
T ss_pred eeccCCCCccceeeccccCCChHHHHHHHHHHHHHHHHHHhhc------------cccCCCCCCHHHHHHhhcchhhhhc
Confidence 9996678899999999999999999999999999999999951 6778999999999999999755443
No 4
>PLN02906 xanthine dehydrogenase
Probab=100.00 E-value=9e-260 Score=2542.35 Aligned_cols=1247 Identities=35% Similarity=0.557 Sum_probs=1112.5
Q ss_pred CCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEecccCCCCCCcchHH
Q 000629 31 STTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGFHPIH 110 (1383)
Q Consensus 31 ~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~~h~iq 110 (1383)
+++||+|||+ +||||||+||++|+||||||+|+++|+.+|++.+++|||||+|+++++|++|+|||||++.++.+||||
T Consensus 1 ~~~ll~~LR~-~~l~g~k~gC~~g~CGaCtv~~~~~~~~~~~~~~~~v~sC~~~~~~~~g~~i~Tvegl~~~~~~~~~vq 79 (1319)
T PLN02906 1 HQTLLEYLRD-LGLTGTKLGCGEGGCGACTVMVSHYDRKTGKCVHYAVNACLAPLYSVEGMHVITVEGIGNRRDGLHPVQ 79 (1319)
T ss_pred CCcHHHHHHh-CCCCCCCCCcCCCCCCCeEEEECCccccCCccCCeEehhhHHHHHHhCCCEEEecCCCCCCCCCCCHHH
Confidence 4799999998 999999999999999999999999998889999999999999999999999999999986457899999
Q ss_pred HHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCChhHHHHHHHhhhccc--
Q 000629 111 QRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVD-- 188 (1383)
Q Consensus 111 ~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~a~~~~-- 188 (1383)
++|+++|++|||||||||||++|+||+++ .+.| |++||+++|+|||||||||+||++|+++++.+.+
T Consensus 80 ~a~~~~~~~QCG~CtpG~vm~~~~ll~~~----~~~~-------~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~~~~~ 148 (1319)
T PLN02906 80 EALASMHGSQCGFCTPGFIMSMYALLRSS----KTPP-------TEEQIEECLAGNLCRCTGYRPILDAFRVFAKTDDAL 148 (1319)
T ss_pred HHHHHcCCCcCCCCchHHHHHHHHHHHhC----CCCC-------CHHHHHHHhcCCcccCCCCHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999542 1344 5999999999999999999999999999997742
Q ss_pred --------ccccccccccccCC-c-c--------------cc----cccCCCCCCCCCcccCCCcccccccCCceeecC-
Q 000629 189 --------IEDLGINSFWAKGE-S-K--------------EV----KISRLPPYKHNGELCRFPLFLKKENSSAMLLDV- 239 (1383)
Q Consensus 189 --------~~~~~~~~c~~~~~-~-~--------------~~----~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~- 239 (1383)
+++++ ++|..++. + + .+ ..+++++|+++|++ +||++|....+..+.+.+
T Consensus 149 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~f~~~l~~~~~~~~~~~~~ 226 (1319)
T PLN02906 149 YTGVSSLSLQDGE-PICPSTGKPCSCGSKTTSAAGTCKSDRFQPISYSEIDGSWYTEKEL-IFPPELLLRKLTPLKLLGN 226 (1319)
T ss_pred CCcccchhhhhcc-ccccccCcccccccccccccccccccccccccccccccccCccccc-cCCHHHhhCCCcceeecCC
Confidence 11222 23321110 0 0 00 12467889988875 999999654444556643
Q ss_pred -CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eee-cccCceEEecCCCccccceeecCCcEEEcccccHH
Q 000629 240 -KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTIS 316 (1383)
Q Consensus 240 -~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~ 316 (1383)
+++||+|+||+||+++|+ ++|++++|||||||++ ++. ...++.+|||++|+||++|+.++++|+|||+|||+
T Consensus 227 ~~~~~~~P~tl~ea~~ll~-----~~~~a~ivAGGTdl~~~~~~~~~~~~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~ 301 (1319)
T PLN02906 227 GGLTWYRPTSLQHLLELKA-----EYPDAKLVVGNTEVGIEMRFKNAQYPVLISPTHVPELNAIKVKDDGLEIGAAVRLS 301 (1319)
T ss_pred CCceEECcCCHHHHHHHHH-----hCCCCEEEEcCchhHHHhhhccCCCCeEEECCCChhhhcEEecCCEEEEecCCcHH
Confidence 789999999999999999 4688999999999988 433 36789999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc-eEE
Q 000629 317 KAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-CEK 395 (1383)
Q Consensus 317 ~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g-~R~ 395 (1383)
+|+++|...+.+.++.....+|.|++++++|||+||||+||||||||+++|+ ||++|+|+||||+|+|.+.+| +|+
T Consensus 302 el~~~l~~~i~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asP~---sD~~p~LlAl~A~v~l~s~~g~~R~ 378 (1319)
T PLN02906 302 ELQNLFRKVVKERPAHETSACKAFIEQLKWFAGTQIRNVASIGGNICTASPI---SDLNPLWMAAGATFVIISCDGDIRS 378 (1319)
T ss_pred HHHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCHhhcCceechhhhccCCCc---hhHHHHHHHcCcEEEEEcCCCCeEE
Confidence 9999888776655556667899999999999999999999999999999999 999999999999999999886 899
Q ss_pred Eehhhhcc---CCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCce
Q 000629 396 LMLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIR 472 (1383)
Q Consensus 396 v~l~dF~~---~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~ 472 (1383)
||++|||. ++.|+++|||++|+||.+.. ..++.+||+++| +++|||+||+||.++++..+ ++.+
T Consensus 379 vpl~dFf~g~~kt~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~dia~V~~A~~v~l~~~~--~~~~ 445 (1319)
T PLN02906 379 VPASDFFLGYRKVDLKPDEILLSVFLPWTRP----------FEYVKEFKQAHR-RDDDIAIVNAGMRVKLEEKD--GEWI 445 (1319)
T ss_pred EEHHHhcCccccccCCCCceEEEEEccCCCC----------CccEEEEEEcCc-cccchhheeeEEEEEEecCC--CCce
Confidence 99999997 78999999999999997654 467889999999 79999999999999997311 1128
Q ss_pred eeeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC--CcHHHHhHHHHHHHHHHHHHhhhhc
Q 000629 473 VNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT--SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1383)
Q Consensus 473 i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~--~s~eYR~~la~~L~~r~l~~~~~~~ 550 (1383)
|+++||+||||+++ |+|+.++|++|.||+|+++++++|++.+.+++.|.++. +|++||+.|+++||+|||++++.++
T Consensus 446 i~~aria~Ggva~~-p~ra~~~E~~L~G~~~~~~~i~~A~~~l~~~~~p~~d~~~~sa~YR~~la~~ll~r~~~~~~~~~ 524 (1319)
T PLN02906 446 VSDASIAYGGVAPL-SVSARKTEEFLIGKPWNKETLQDALKVLQKDILIKEDAPGGMVEFRKSLALSFFFKFFLWVSHQL 524 (1319)
T ss_pred EeEEEEEEeccCCc-eecHHHHHHHhcCCCCCHHHHHHHHHHHHhccCCCcCCCCCCHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999 99999999999999999999999999999999987763 7999999999999999999999876
Q ss_pred cCCCccccCCCCCCCccccccccccccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCC
Q 000629 551 NGISRDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSP 630 (1383)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~ 630 (1383)
....+.+. ..++ +..| ..+.++||+|++.|.|+..+++++|||+++|+|+..||||+++|++|++.+
T Consensus 525 ~~~~~~~~----~~~~-------~~~~--~~~~~~~~~~~~~q~~~~~~~~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~ 591 (1319)
T PLN02906 525 EADGSTIE----TFPE-------SHLS--AAQPFPRPSSVGMQDYETVKQGTAVGQPEVHLSAELQVTGEAEYADDIPMP 591 (1319)
T ss_pred cccccccc----cCCh-------hhcc--ccccccCCCCccceecccccccccCCCCccCcchhhhcceeEEeccCCcCC
Confidence 21000000 0011 1122 245789999999999998788999999999999999999999999999855
Q ss_pred CCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCC-CCccccCCCcccccCCceeecCCeEEEEEECC
Q 000629 631 INCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQN-IGSKTIFGSEPLFADELTRCAGQPVAFVVADS 709 (1383)
Q Consensus 631 ~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~-~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes 709 (1383)
|||||+++||||++||+|++||+|+|++||||++|+|++|+| +.| ++. ...++|+|++++|+|+|||||+|||+|
T Consensus 592 ~g~L~a~~vrSp~aharI~sID~s~A~~~pGV~~v~t~~Dip--~~~~~g~--~~~~~~~la~~~V~y~GqpVa~VvA~t 667 (1319)
T PLN02906 592 PNTLHAALVLSTKPHARILSIDDSEAKSSPGFAGIFLAKDVP--GDNMIGP--VVHDEELFATDVVTCVGQVIGVVVADT 667 (1319)
T ss_pred CCCEEEEEEecCcCceEEeecchHHHhCCCCeEEEEchhhCC--CCCCCCC--CCCCeeEecCcEEEEcCCeEEEEEECC
Confidence 899999999999999999999999999999999999999998 433 332 235889999999999999999999999
Q ss_pred HHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCCcccCCccccCCCCChhhhccc--cCeeeEEEEEEecccccCCCC
Q 000629 710 QKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNE--ADHRILAAEIKLGSQYYFYME 787 (1383)
Q Consensus 710 ~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~e~af~~--A~~vvve~~~~~~~~~h~~mE 787 (1383)
+++|++|+++|+|+| |+| |+++|+++|++++++|+... ....+||++++|++ |+++ ||++|++++|+|+|||
T Consensus 668 ~~~A~~Aa~~V~Vey--e~l-p~v~~~~~Al~~~a~~~~~~--~~~~~Gdv~~af~~a~a~~v-ve~~~~~~~~~H~~mE 741 (1319)
T PLN02906 668 QENAKAAARKVKVEY--EEL-PAILSIEEAIEAGSFHPNTE--RRLEKGDVELCFASGQCDRI-IEGEVQMGGQEHFYLE 741 (1319)
T ss_pred HHHHHHHhCCCEEEE--ecC-CccCCHHHHhcCCCcccCCC--ceeecCCHHHHhhccCCceE-EEEEEEECCccccccC
Confidence 999999999999999 889 89999999999988664211 23588999999999 6986 9999999999999999
Q ss_pred CCceEEEECCC-CcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEE
Q 000629 788 TQTALAVPDED-NCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRI 866 (1383)
Q Consensus 788 p~~avA~~~~~-g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl 866 (1383)
|++|+|+|+++ |+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+....++++||++|+++||||||
T Consensus 742 p~~~~A~~~~~~g~l~v~~sTQ~p~~~r~~vA~~Lgip~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl 821 (1319)
T PLN02906 742 PNSSLVWTSDSGNEVHMISSTQAPQKHQKYVAHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPAYLLNRPVKL 821 (1319)
T ss_pred CCeEEEEEeCCCCEEEEEECCcCHHHHHHHHHHHhCCChHHeEEEeCCcccCccccccccchHHHHHHHHHHHhCCCEEE
Confidence 99999999977 58999999999999999999999999999999999999999999875555678889999999999999
Q ss_pred EeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-chhhhccccCCCCcCCcEEEEEEEeecCC
Q 000629 867 YVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNL 945 (1383)
Q Consensus 867 ~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~ 945 (1383)
+|||+|+|+++++|||+.++||+|+|+||+|++++++++.|+|+|.+++. ++...+.+..++|+|||++++++.|+||+
T Consensus 822 ~~sReE~~~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~ 901 (1319)
T PLN02906 822 TLDRDVDMMITGQRHAFLGKYKVGFTNEGKILALDLEIYNNGGNSLDLSGAVLERAMFHSDNVYEIPNVRIVGNVCFTNF 901 (1319)
T ss_pred EecHHHHhhhcCCccceEEEEEEEECCCCCEEEEEEEEEecCcccCCcchHHHHHHHHhcCCCccCcceEEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999998775 45566667889999999999999999999
Q ss_pred CCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHhhcCchhH
Q 000629 946 PSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQR 1024 (1383)
Q Consensus 946 ~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r 1024 (1383)
+|+|||||||.||++|++|++||++|++|||||+|||+||++++++. +++|+.+++ .+++||+++++.++|++|
T Consensus 902 ~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~g~~-----~~~g~~~~~~~~~~~l~~~~~~~~~~~r 976 (1319)
T PLN02906 902 PSNTAFRGFGGPQGMLITENWIQRIAVELNKSPEEIREMNFQGEGSV-----THYGQVLQHCTLPQLWDELKVSCDFLKR 976 (1319)
T ss_pred CCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCC-----CcCCccccCCCHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999987654 245766665 999999999999999999
Q ss_pred HHHHHHHhhcCCCcceeceecceEeeccCC-----CcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCC
Q 000629 1025 TEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCG 1099 (1383)
Q Consensus 1025 ~~~~~~~~~~~~~~~rGia~a~~~~g~~~~-----~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~ 1099 (1383)
++++++||+.++|+|||+|+++..||.++. ++.+.|+|++||+|+|.+|++|||||++|+++||||++|||
T Consensus 977 ~~~~~~~~~~~~~~krGiG~a~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGi---- 1052 (1319)
T PLN02906 977 REEVDEFNAKNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNI---- 1052 (1319)
T ss_pred HHHHHHHhhcCCCceEEEEEEecccccccccccCCccceEEEEcCCceEEEEECCccCCCChHHHHHHHHHHHHCC----
Confidence 888888998899999999999988887653 57899999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHhhcCceeE
Q 000629 1100 GTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQAHLQSVNLS 1179 (1383)
Q Consensus 1100 ~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~~~~~~~~~~~~~~~a~~~~~~l~ 1179 (1383)
|+|+|+|..+||+.+||+++|+|||+|+++|+||++||++||+||.++++++ ..++|++++..++..+.+|.
T Consensus 1053 ----p~d~V~v~~~DT~~~p~~~gT~aSr~t~~~G~Av~~Aa~~l~~rl~~~a~~~----~~~~~~~l~~~~~~~~~~l~ 1124 (1319)
T PLN02906 1053 ----PLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEQIKARMEPVASKL----NFSSFAELVTACYFQRIDLS 1124 (1319)
T ss_pred ----CHHHEEEEccCCCCCCCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHHHc----CCCCHHHHHHHhhccCCCeE
Confidence 9999999999999999999999999999999999999999999999997765 35899999988877677799
Q ss_pred EEEeeccCC----------CcccccceeEEEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhc
Q 000629 1180 ASSMYVPDF----------TSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFML 1249 (1383)
Q Consensus 1180 a~~~~~~~~----------~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~ 1249 (1383)
+.++|.+.. .++.||+||+|++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+
T Consensus 1125 a~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~vlr~~~v~D~G~~iNP~~~~GQieGg~vqGiG~aL~ 1204 (1319)
T PLN02906 1125 AHGFYITPDIGFDWKTGKGNPFNYFTYGAAFAEVEIDTLTGDFHTRRVDIVMDLGYSINPAIDIGQIEGAFVQGLGWVAL 1204 (1319)
T ss_pred EEEEecCCCcccccccccCCCccceeeeEEEEEEEEecCCCcEEEEEEEEEEecCccCCHHHHhHhhHHHHHHHHHHHhc
Confidence 999886532 2445789999999999999999999999999999999999999999999999999999999
Q ss_pred cCceeCCC-------CcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHH
Q 000629 1250 EEYAANSD-------GLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 1322 (1383)
Q Consensus 1250 Ee~~~d~~-------G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A 1322 (1383)
||+.||++ |+++|++|++|+||++.|||.+|+|++++..++|.||||+||+||+|+++++++++||+|||++|
T Consensus 1205 Ee~~~d~~~~~~~~~G~llt~~~~~Y~iPt~~DiP~~~~v~~~~~~~~~~~p~gaKGvGE~~~~~~aav~~AI~~Ai~~A 1284 (1319)
T PLN02906 1205 EELKWGDAAHKWIRPGSLFTCGPGTYKIPSVNDIPFKFNVSLLKGAPNPKAIHSSKAVGEPPFFLAASVFFAIKDAIKAA 1284 (1319)
T ss_pred CceEEcccccccCCCCccccCCCcccCCCCccccCCceEEEEEeCCCCCCCCCcCccCCccccccchHHHHHHHHHHHHH
Confidence 99999976 99999999999999999999559999996445889999999999999999999999999999999
Q ss_pred HHhhhcccccCCCCceeecCCCCChHHHHHhcCCChHH
Q 000629 1323 RKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGLDSVE 1360 (1383)
Q Consensus 1323 ~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~~~~~ 1360 (1383)
+++. |..+++++++|+|||||+++|+.+..+
T Consensus 1285 ~~~~-------g~~~~~~~~~P~Tperi~~a~~~~~~~ 1315 (1319)
T PLN02906 1285 RAEV-------GLHGWFPLDTPATPERIRMACGDEITA 1315 (1319)
T ss_pred Hhhc-------CCCCcccCCCCCCHHHHHHHccchhhh
Confidence 9864 545578899999999999999986443
No 5
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=100.00 E-value=2.3e-185 Score=1772.57 Aligned_cols=878 Identities=22% Similarity=0.301 Sum_probs=760.6
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccC-ccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCC
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLG-CGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~g-C~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 90 (1383)
|+|+|+|||++++++ ++|+++|+++||+ +||||+|.| |++|.||||||+| |+++|+||++|+.+++|
T Consensus 1 ~~i~~~vNg~~~~~~-~~~~~~l~~~LR~-~~~~~~k~g~c~~g~CGaCtv~~----------dg~~v~sC~~~~~~~~g 68 (956)
T PRK09800 1 MIIHFTLNGAPQELT-VNPGENVQKLLFN-MGMHSVRNSDDGFGFAGSDAIIF----------NGNIVNASLLIAAQLEK 68 (956)
T ss_pred CeEEEEECCEEEEEe-cCCCCCHHHHHHH-CCCCccccCCCCcccCCCCEEEE----------CCeEEeHHHHHHHHcCC
Confidence 569999999999998 8999999999999 999999998 8999999999999 79999999999999999
Q ss_pred ceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 000629 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (1383)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRC 170 (1383)
++|+|||||+. .+.+||+|+||+++|++|||||||||||++++||+ +||+|+ ++||+++|+||||||
T Consensus 69 ~~i~Tvegl~~-~~~~~~~q~af~~~~~~QCG~CtpG~~m~~~~ll~-----~~~~p~-------~~~i~~~l~gnlCRC 135 (956)
T PRK09800 69 ADIRTAESLGK-WNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLD-----RIAAPT-------REEIDDALSGLFSRD 135 (956)
T ss_pred CEEEecCCcCC-CCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHh-----cCCCCC-------HHHHHHHHhhchhcc
Confidence 99999999985 56899999999999999999999999999999995 357774 999999999999999
Q ss_pred CCChhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccccCCceeecCCceEEecCCHH
Q 000629 171 TGYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPISVQ 250 (1383)
Q Consensus 171 tgy~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~P~sl~ 250 (1383)
|||++|++|++.++...
T Consensus 136 tgy~~i~~av~~~~~~~--------------------------------------------------------------- 152 (956)
T PRK09800 136 AGWQQYYQVIELAVARK--------------------------------------------------------------- 152 (956)
T ss_pred CCcHHHHHHHHHHHHhh---------------------------------------------------------------
Confidence 99999999998643110
Q ss_pred HHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhhhc
Q 000629 251 ELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFH 330 (1383)
Q Consensus 251 e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~~~ 330 (1383)
+ .
T Consensus 153 ------~-------------------------~----------------------------------------------- 154 (956)
T PRK09800 153 ------N-------------------------N----------------------------------------------- 154 (956)
T ss_pred ------c-------------------------c-----------------------------------------------
Confidence 0 0
Q ss_pred hhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhccCCCCCCC
Q 000629 331 SEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSR 410 (1383)
Q Consensus 331 ~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~~~~L~~~ 410 (1383)
+. +
T Consensus 155 ------------------------------------~~---~-------------------------------------- 157 (956)
T PRK09800 155 ------------------------------------PQ---A-------------------------------------- 157 (956)
T ss_pred ------------------------------------cc---c--------------------------------------
Confidence 00 0
Q ss_pred ceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCccccc
Q 000629 411 SILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIR 490 (1383)
Q Consensus 411 eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p~r 490 (1383)
. . . . .
T Consensus 158 ----------~-~----------~----------~-----------------~--------------------------- 162 (956)
T PRK09800 158 ----------T-I----------D----------I-----------------A--------------------------- 162 (956)
T ss_pred ----------c-c----------c----------c-----------------c---------------------------
Confidence 0 0 0 0 0
Q ss_pred HHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCCCcHHHHhHHHHHHHHHHHHHhhhhccCCCccccCCCCCCCccccc
Q 000629 491 ARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDS 570 (1383)
Q Consensus 491 a~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~~s~eYR~~la~~L~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (1383)
T Consensus 163 -------------------------------------------------------------------------------- 162 (956)
T PRK09800 163 -------------------------------------------------------------------------------- 162 (956)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEecc
Q 000629 571 HVQQNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKG 650 (1383)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~s 650 (1383)
.+.++++++||++++|+|++.||||+++|++|+. +|||||++++|||++||||++
T Consensus 163 ------------------------~~~~~~~~~VGk~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~vvrSp~ahArI~s 217 (956)
T PRK09800 163 ------------------------PTFRDDLEVIGKHYPKTDAAKMVQAKPCYVEDRV-TADACVIKMLRSPHAHALITH 217 (956)
T ss_pred ------------------------cccccccccCCCCCCCcChHhhCcccccccccCC-CCCCEEEEEeecCCCcEEEee
Confidence 0001223569999999999999999999999996 689999999999999999999
Q ss_pred ccCcccCCCCCEEEEEEcCCCCC-----CCCCCCccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEc
Q 000629 651 IEFKSESVPDVVTALLSYKDIPE-----GGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYE 725 (1383)
Q Consensus 651 ID~s~A~~~pGVv~Vvt~~Dip~-----~g~~~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~ 725 (1383)
||+|+|++||||++|+|++|+|. .+..++ ....++++|++++|||+|||||+|||+|+++|++|+++|+|||
T Consensus 218 ID~s~A~a~pGV~~Vvt~~Dvp~~~~~~~~~~~~--~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~V~Vey- 294 (956)
T PRK09800 218 LDVSKAEALPGVVHVITHLNCPDIYYTPGGQSAP--EPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEY- 294 (956)
T ss_pred eEHHHHHhCCCeEEEEcHHHCCcccccccCcCCC--CCCCCCccccCCeEEEcCCeEEEEEECCHHHHHHHhcCCceEE-
Confidence 99999999999999999999982 111111 1112344566999999999999999999999999999999999
Q ss_pred cCCCCCCccCHHHHhhcCCC--ccc------------------------------------CCcc---ccCCCCChhhhc
Q 000629 726 MGNLEPPILSVEEAVDRSSL--FEV------------------------------------PSFL---YPKPVGDISKGM 764 (1383)
Q Consensus 726 ~e~l~p~v~~~~~Al~~~a~--~~~------------------------------------~~~~---~~~~~Gd~e~af 764 (1383)
|+| |+++|+++|++++++ |+. +.|+ .....||++++|
T Consensus 295 -e~L-p~v~d~~~Al~~~a~~vh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af 372 (956)
T PRK09800 295 -EVL-KPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGF 372 (956)
T ss_pred -EeC-CccCCHHHHhcCCCceecccccccccccccccccccccccccccccccccccccCCCCceeeeccccCCCHHHHH
Confidence 899 999999999999885 321 1233 134689999999
Q ss_pred cccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCC
Q 000629 765 NEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAI 844 (1383)
Q Consensus 765 ~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~ 844 (1383)
++|+++ ||++|++++|+|+||||++++|+||+ |+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|..
T Consensus 373 ~~a~~v-ve~~y~~~~~~H~~mEp~~aiA~~d~-~~l~v~~stQ~p~~~r~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~ 450 (956)
T PRK09800 373 ADADVI-IERTYNSTQAQQCPTETHICFTRMDG-DRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQD 450 (956)
T ss_pred hhCCEE-EEEEEEeCCcccccCCCceEEEEEeC-CeeEEEECCCcHHHHHHHHHHHHCCCHHHeEEEcCCCCccCcCccc
Confidence 999996 99999999999999999999999985 5899999999999999999999999999999999999999999985
Q ss_pred CccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-chhhhcc
Q 000629 845 KAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMI 923 (1383)
Q Consensus 845 ~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~~ 923 (1383)
. ..+..||++|+++||||||+|||+|+|.++.+|||+.+++|+|+|+||+|+|++++++.|+|+|.+++. +......
T Consensus 451 ~--~~e~~aA~aA~~~grPVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~a~~~~~~~d~Gay~~~~~~v~~~~~~ 528 (956)
T PRK09800 451 I--LLEEVCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPA 528 (956)
T ss_pred c--cHHHHHHHHHHHhCCCEEEEeeHHHHhhCcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcCCCcchHHHHHHHh
Confidence 2 345668999999999999999999999999999999999999999999999999999999999988765 3333444
Q ss_pred ccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccc------c
Q 000629 924 GALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFY------E 997 (1383)
Q Consensus 924 ~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~------~ 997 (1383)
+..++|+|||++++.+.|+||++|+|+|||||.||++|++|++||++|++|||||+|||+||++++|+....+ .
T Consensus 529 ~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~Es~mDelA~~lg~DPve~R~rN~~~~gd~~~~~~~~~~g~ 608 (956)
T PRK09800 529 LSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGK 608 (956)
T ss_pred hcCcCcccceEEEEEEEEECCCCCCCCcCCCCcchHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCccccccccccccc
Confidence 5668999999999999999999999999999999999999999999999999999999999999887642100 0
Q ss_pred cCCCcc-cc-CCHHHHHHHHHhhcCchhHHHHHHHHhhcCCCc-ceeceecceEeecc-CCCcceEEEEcCCCcEEEEeC
Q 000629 998 SSAGEY-AE-YTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWR-KKGVCRLPIVHEVT-LRSTPGKVSILSDGSVVVEVG 1073 (1383)
Q Consensus 998 ~~~g~~-~~-~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~-~rGia~a~~~~g~~-~~~~~a~v~l~~DGsv~v~~g 1073 (1383)
.+.+.+ ++ ..+.+||+++++.++|+++++ .+++|+ |+|+++.+..++.+ ...+.+.|+|++||+|+|++|
T Consensus 609 ~~~~~~~~~s~~~~~~L~~~~e~~~w~~~~~------~~g~~~~G~Gia~~~~~~g~~~~~~~~a~v~l~~dGsv~v~~g 682 (956)
T PRK09800 609 APTSVPSAASCALEEILRQGREMIQWSSPKP------QNGDWHIGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSG 682 (956)
T ss_pred ccccCccccCCCHHHHHHHHHHhcCcchhhh------hcCCCeeEEEEEEEEEcccCCCCCCceEEEEECCCceEEEEEC
Confidence 111222 33 389999999999999987532 235554 55555433222322 225789999999999999999
Q ss_pred CccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHH
Q 000629 1074 GIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRE 1153 (1383)
Q Consensus 1074 ~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~ 1153 (1383)
++|||||++|+++||+||+||+ |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||..+++
T Consensus 683 ~~e~GqG~~T~~~QiaAe~LGi--------p~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa 754 (956)
T PRK09800 683 GADIGTGLDTVVTKLAAEVLHC--------PPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGA 754 (956)
T ss_pred CCCCCccHHHHHHHHHHHHHCC--------CceeEEEEeCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999999999999999999999999988
Q ss_pred HHhcc----------------CCCcCHHHHHHHHhhc--CceeEEEEeeccCCCcccccceeEEEEEEEEECCCCcEEEE
Q 000629 1154 RLQGQ----------------MGNVEWETLIQQAHLQ--SVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIV 1215 (1383)
Q Consensus 1154 ~l~~~----------------~~~~~~~~~~~~a~~~--~~~l~a~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~ 1215 (1383)
++++. .+.++|.+++..++.. ...+.+.++|.++. .+|+|+|+++|||||++||+|+|+
T Consensus 755 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~a~~aeVeVD~~TG~vkvl 831 (956)
T PRK09800 755 QMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPD---FAFPYGANFAEVAVNTRTGEIRLD 831 (956)
T ss_pred HHhCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhcCCCCCCeEEEEEecCCC---CCcceEEEEEEEEEECCCCcEEEE
Confidence 76542 1246799998766543 23578888876532 257999999999999999999999
Q ss_pred EEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCC
Q 000629 1216 RSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVL 1295 (1383)
Q Consensus 1216 r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~ 1295 (1383)
|+++++|||++|||.+++||||||++||||+||+||+.||++|++++++|++|++|++.|+|.+|+++++|++ +|.|||
T Consensus 832 ~~~~~~D~G~vINP~~v~gQieGgi~qGiG~AL~Ee~~~d~~G~~~~~~l~~Y~iPt~~DiP~~i~v~~ve~~-~~~~p~ 910 (956)
T PRK09800 832 KFYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSD-DKVGPF 910 (956)
T ss_pred EEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCCcEECCCCcCCCCCcccCCCCChhhCCCceEEEEEcCC-CCCCCC
Confidence 9999999999999999999999999999999999999999899999999999999999999944999999864 688999
Q ss_pred CCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcC
Q 000629 1296 SSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCG 1355 (1383)
Q Consensus 1296 GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~ 1355 (1383)
|+||+||+++++ +++||+|||++|++ ++++++|+|||+||++|.
T Consensus 911 GaKgvGE~~~~~---~a~AIanAI~~A~G-------------~r~~~lP~tpe~vl~al~ 954 (956)
T PRK09800 911 GAKSISEIGVNG---AAPAIATAIHDACG-------------IWLREWHFTPEKILTALE 954 (956)
T ss_pred CCcccCCCcccc---hHHHHHHHHHHHhC-------------cCcccCCCCHHHHHHHHh
Confidence 999999999998 55699999999995 677999999999999875
No 6
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=100.00 E-value=2.4e-182 Score=1747.16 Aligned_cols=872 Identities=23% Similarity=0.318 Sum_probs=754.2
Q ss_pred EEECCEEEEEccCCCCCcHHHHHhcccCCccccc-CccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeE
Q 000629 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL-GCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLIT 94 (1383)
Q Consensus 16 ~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~-gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~ 94 (1383)
|+|||++++++ ++|+++|+++||+. ||||+|. ||++|.||||||+| |+++|+||++|+.+++|++|+
T Consensus 1 ~~~Ng~~~~~~-~~~~~~l~~~LR~~-~l~~~k~~~c~~g~CGaCtv~~----------dg~~v~sC~~~~~~~~g~~i~ 68 (951)
T TIGR03313 1 FTLNGAPQTLE-CKLGENVQTLLFNM-GMHSVRNSDDGFGFAGSDAILF----------NGVLKNASLLIAAQLEGAEVR 68 (951)
T ss_pred CEECCEEEEEe-cCCCCCHHHHHHHC-CCCCCcCCCCCcccCCCCEEEE----------CCeEeeHHHHHHHHcCCCEEE
Confidence 68999999997 89999999999996 9999999 79999999999999 799999999999999999999
Q ss_pred EecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCCh
Q 000629 95 TSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYR 174 (1383)
Q Consensus 95 TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~ 174 (1383)
|||||+. .+.+||+|++|++++++|||||||||||++++||+ +||+|+ ++||+++|+|||||||||+
T Consensus 69 Tiegl~~-~~~~~~~q~af~~~~a~QCG~CtpG~~~~~~~ll~-----~~~~p~-------~~~i~~~l~gnlcrctgy~ 135 (951)
T TIGR03313 69 TAESLGQ-WNQLSLVQQAMVDVGVVQSGYNDPAAALILTDLLD-----RNTQPN-------RAEIDDALSGLFSRDAGYQ 135 (951)
T ss_pred ecCcCCC-CCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHh-----cCCCCC-------HHHHHHHHhcceeccCCcH
Confidence 9999985 56899999999999999999999999999999995 357774 9999999999999999999
Q ss_pred hHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccccCCceeecCCceEEecCCHHHHHH
Q 000629 175 PIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPISVQELRN 254 (1383)
Q Consensus 175 ~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~P~sl~e~l~ 254 (1383)
+|++|++.++...
T Consensus 136 ~i~~av~~~~~~~------------------------------------------------------------------- 148 (951)
T TIGR03313 136 QFYQVIELAVKRL------------------------------------------------------------------- 148 (951)
T ss_pred HHHHHHHHHHHhc-------------------------------------------------------------------
Confidence 9999998643110
Q ss_pred HHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhhhchhhh
Q 000629 255 VLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEAL 334 (1383)
Q Consensus 255 ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~~~~~~~ 334 (1383)
. .
T Consensus 149 --~-------------------------~--------------------------------------------------- 150 (951)
T TIGR03313 149 --K-------------------------D--------------------------------------------------- 150 (951)
T ss_pred --c-------------------------c---------------------------------------------------
Confidence 0 0
Q ss_pred hhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhccCCCCCCCceEE
Q 000629 335 MVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSILL 414 (1383)
Q Consensus 335 ~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~~~~L~~~eil~ 414 (1383)
+. +
T Consensus 151 --------------------------------~~---~------------------------------------------ 153 (951)
T TIGR03313 151 --------------------------------PE---H------------------------------------------ 153 (951)
T ss_pred --------------------------------cc---c------------------------------------------
Confidence 00 0
Q ss_pred EEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCcccccHHHH
Q 000629 415 SVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRV 494 (1383)
Q Consensus 415 ~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~ 494 (1383)
+ - .
T Consensus 154 --------------------------~---~----------------------------------------~-------- 156 (951)
T TIGR03313 154 --------------------------K---Q----------------------------------------S-------- 156 (951)
T ss_pred --------------------------c---c----------------------------------------c--------
Confidence 0 0 0
Q ss_pred HHHHcCCCCChHHHHHHHHHHhhcCCCCCCCCcHHHHhHHHHHHHHHHHHHhhhhccCCCccccCCCCCCCccccccccc
Q 000629 495 EEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQQ 574 (1383)
Q Consensus 495 E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~~s~eYR~~la~~L~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (1383)
. . +
T Consensus 157 ----------------------------------------------------~--~----~------------------- 159 (951)
T TIGR03313 157 ----------------------------------------------------I--A----P------------------- 159 (951)
T ss_pred ----------------------------------------------------c--c----C-------------------
Confidence 0 0 0
Q ss_pred cccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCc
Q 000629 575 NHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFK 654 (1383)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s 654 (1383)
..++++++||++++|+|++.||||+++|++|+. +|||||++++|||++||||++||+|
T Consensus 160 ---------------------~~~~~~~~iGk~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~v~rSP~ahArI~sID~s 217 (951)
T TIGR03313 160 ---------------------EFRDDLTIIGKNCPKIDAAKMVQAKPCYVEDRV-PADACVIKMLRSPHPHAWITHLDVS 217 (951)
T ss_pred ---------------------ccccccccCCCCCcCcChHhhCccCccccccCC-CCCCEEEEEEecCCCcEEEEeeEHH
Confidence 001223469999999999999999999999996 6899999999999999999999999
Q ss_pred ccCCCCCEEEEEEcCCCCCC-----CCCCCccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCC
Q 000629 655 SESVPDVVTALLSYKDIPEG-----GQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNL 729 (1383)
Q Consensus 655 ~A~~~pGVv~Vvt~~Dip~~-----g~~~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l 729 (1383)
+|++||||++|+|++|+|.. +..++ ....++++|++++|||+|||||+|||+|+++|++|+++|+||| |+|
T Consensus 218 ~A~a~pGV~~Vvt~~D~p~~~~~~~~~~~~--~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~I~Vey--e~L 293 (951)
T TIGR03313 218 KAEALPGVVHVITHLNCPDIYYTPGGQSAP--EPSPLDRRMFGQKMRHVGDRVAAVVAESEEIALHALKLIEVEY--DVL 293 (951)
T ss_pred HHHhCCCeEEEEeHHHCCccccCCCCccCC--CCCCCcccccCCeEEEcCCEEEEEEECCHHHHHHHhcCCeeEE--EeC
Confidence 99999999999999999821 11111 0112345578999999999999999999999999999999999 899
Q ss_pred CCCccCHHHHhhcCCC--ccc------------------------------------CCcc---ccCCCCChhhhccccC
Q 000629 730 EPPILSVEEAVDRSSL--FEV------------------------------------PSFL---YPKPVGDISKGMNEAD 768 (1383)
Q Consensus 730 ~p~v~~~~~Al~~~a~--~~~------------------------------------~~~~---~~~~~Gd~e~af~~A~ 768 (1383)
|+++|+++|++++++ |+. +.|+ .....||++++|++|+
T Consensus 294 -p~v~d~~~Al~~~ap~ih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af~~A~ 372 (951)
T TIGR03313 294 -TPVMSIDEAMAAEAPIVHDEPIVYGAGAPDDLEEQNANADPRGEHMIINFPIGSRPRKNIAASVHGHIGDLNKGFAEAD 372 (951)
T ss_pred -CccCCHHHHhcCCCCeeccccccccccccccccccccccccccccccccccccccCCCceeeeccccCCCHHHHHhcCC
Confidence 999999999999885 321 0222 1247799999999999
Q ss_pred eeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccH
Q 000629 769 HRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMP 848 (1383)
Q Consensus 769 ~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~ 848 (1383)
++ ||++|++++|+|+||||++|+|+||+ ++|+||+|||+|+.+|..||++||||++||||+.+++|||||+|... .
T Consensus 373 ~v-ve~~y~~~~~~H~~mEp~~aiA~~d~-~~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~--~ 448 (951)
T TIGR03313 373 VI-IERTYESTQAQQCPTETHICFTYMDG-ERLVIHASTQVPWHVRRQVARIVGMKQHKVHVIKERVGGGFGSKQDI--L 448 (951)
T ss_pred EE-EEEEEEECCEeeecCCCceEEEEEcC-CeEEEEECCcCHHHHHHHHHHHHCCCHHHeEEEcCCCCcCcCCcccc--c
Confidence 96 99999999999999999999999984 58999999999999999999999999999999999999999999752 3
Q ss_pred HHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCCchh-hhccccCC
Q 000629 849 VATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSPIMP-SNMIGALK 927 (1383)
Q Consensus 849 ~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~-~~~~~~~~ 927 (1383)
.+..||++|+++||||||+|||+|+|.++.+||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+. .......+
T Consensus 449 ~e~~aA~aA~~~GrPVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~A~~~~~~~d~Gay~~~~~~v~~~~~~~~~~ 528 (951)
T TIGR03313 449 LEEVCAWATWVTGRPVYFRYTREEEFICNTSRHVAKVTVKLGAKKDGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLP 528 (951)
T ss_pred HHHHHHHHHHHhCCCEEEEeeHHHHhhccCCCCCeEEEEEEEECCCCcEEEEEEEEEEcCccCcccchHHhhhhhhhcCc
Confidence 44568999999999999999999999999999999999999999999999999999999999987665332 23334568
Q ss_pred CCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccc------ccCCC
Q 000629 928 KYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFY------ESSAG 1001 (1383)
Q Consensus 928 ~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~------~~~~g 1001 (1383)
+|+|||++++.+.|+||++|.|||||||.||+.|++|++||++|++|||||+|||+||++++++..... ..+.+
T Consensus 529 ~Y~ipn~~~~~~~v~TN~~p~ga~Rg~G~~q~~fa~Es~mDelA~~lG~DP~e~R~rN~~~~gd~~~~~~~~~~g~~~~~ 608 (951)
T TIGR03313 529 LYPCDNVDFRVTTYYSNICPTGAYQGYGAPKGNFALTMAMAELAEELGIDQLEMIETNRVHEGQELKILGAIGEGKMPTS 608 (951)
T ss_pred CccCCeEEEEEEEEECCCCCCCCcCCCCcccHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCccccccccccccccccc
Confidence 899999999999999999999999999999999999999999999999999999999999887643100 01112
Q ss_pred cc-ccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCc-ceeceecceEeeccC---CCcceEEEEcCCCcEEEEeCCc
Q 000629 1002 EY-AEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWR-KKGVCRLPIVHEVTL---RSTPGKVSILSDGSVVVEVGGI 1075 (1383)
Q Consensus 1002 ~~-~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~-~rGia~a~~~~g~~~---~~~~a~v~l~~DGsv~v~~g~~ 1075 (1383)
.+ +++ ++.+||++++++++|+++++ ++++|+ |+|+++ ..+..+. ..+.+.|+|++||+|+|++|++
T Consensus 609 ~~~~~s~~~~~~l~~~~~~~~w~~~~~------~~g~~~~G~Gia~--~~~~~g~~~~~~~~a~v~l~~dG~v~v~~g~~ 680 (951)
T TIGR03313 609 VPKAASCALEEILRQGRELIEWDSPKQ------AKGDWKIGRGVAI--IMQKSGIPDIDQANCMIKLESDGTFIVHSGGA 680 (951)
T ss_pred ccccCCCcHHHHHHHHHHhcCccchhh------hccCceeeeEEEE--EEecccCCCCCCccEEEEEcCCceEEEEECCC
Confidence 22 233 89999999999999987542 235564 455544 4433332 2578999999999999999999
Q ss_pred cCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 000629 1076 EMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERL 1155 (1383)
Q Consensus 1076 e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l 1155 (1383)
|||||++|+++||+||+||+ |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||..+++++
T Consensus 681 e~GqG~~T~~~QiaAe~LGv--------p~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~ 752 (951)
T TIGR03313 681 DIGTGLDTVVSKLTAEVLHC--------PMDDVHVISGDTDHALFDKGAYASSGTCFSGNAAKRAAENLREKILFHGAEM 752 (951)
T ss_pred CCCccHHHHHHHHHHHHHCC--------CHHhEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999988776
Q ss_pred hcc----------------CCCcCHHHHHHHHhhc--CceeEEEEeeccCCCcccccceeEEEEEEEEECCCCcEEEEEE
Q 000629 1156 QGQ----------------MGNVEWETLIQQAHLQ--SVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRS 1217 (1383)
Q Consensus 1156 ~~~----------------~~~~~~~~~~~~a~~~--~~~l~a~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~ 1217 (1383)
++. ++.++|.+++..++.. ...+.+.+.|.+.. .+|+|+|+++|||||++||+|||+|+
T Consensus 753 l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~a~~aeVeVD~~TG~vkv~r~ 829 (951)
T TIGR03313 753 LGEPVADVDLAAPGLVRGKTGEVSYFDIAHKAETGTGFGQLVGTGSYITSE---FAFPYGANFAEVAVNTRTGEIRLDKF 829 (951)
T ss_pred hCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhccCCCCCeEEEEEecCCC---CCccceeEEEEEEEECCCCcEEEEEE
Confidence 442 1236899998665532 22477777775432 25799999999999999999999999
Q ss_pred EEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCCCC
Q 000629 1218 DIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSS 1297 (1383)
Q Consensus 1218 ~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~Ga 1297 (1383)
++++|||++|||.+++||||||++||||+||+|++.||++|++++.||++|++|++.|+|.+|+++++|++ +|.||||+
T Consensus 830 ~~~~D~G~~INP~~v~gQieGg~~qGiG~AL~Ee~~~d~~G~~~~~~l~~Y~iPt~~D~P~~~~v~~ve~~-~~~~p~Ga 908 (951)
T TIGR03313 830 YALLDCGTPVNPELALGQIYGATMRAIGHSMTEEIVYDDNGIPLTRDLKSYGAPKIGDIPRDFRAVLVPSD-DKVGPYGA 908 (951)
T ss_pred EEEEECCcccCHHHHHHHHHHHHHHHHHHHHhCCcEECCCCcCCCCChhhCCCCChHhCCCceEEEEEcCC-CCCCCCCC
Confidence 99999999999999999999999999999999999999899999999999999999999943999999865 68899999
Q ss_pred CccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcC
Q 000629 1298 KASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCG 1355 (1383)
Q Consensus 1298 KgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~ 1355 (1383)
||+||+++++ +++||+|||++|++ ++++++|+|||+||++|.
T Consensus 909 KGiGE~~~~~---~apAIanAI~dA~G-------------~r~~~lP~tPe~vl~al~ 950 (951)
T TIGR03313 909 KSISEIGVNG---AAPAIATAIHDACG-------------VWLRDWHFTPEKILKGLN 950 (951)
T ss_pred cccCCCcccc---hHHHHHHHHHHHhC-------------cccccCCCCHHHHHHHhh
Confidence 9999999998 56699999999995 678999999999999875
No 7
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=100.00 E-value=4.4e-175 Score=1671.87 Aligned_cols=832 Identities=27% Similarity=0.392 Sum_probs=711.0
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCcee
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLI 93 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 93 (1383)
++|+|||+. ++ ++|+++|++|||+++||||||.||++|.||||||+| |+++|+|||+|+.+++|++|
T Consensus 1 ~~~~~ng~~--~~-~~~~~~l~~~lr~~~~~~~~k~gc~~g~cgactv~~----------dg~~~~sc~~~~~~~~g~~i 67 (848)
T TIGR03311 1 YEFIVNGRE--VD-VNEEKKLLEFLREDLRLTGVKNGCGEGACGACTVIV----------NGKAVRACRFTTAKLAGKEI 67 (848)
T ss_pred CEEEECCEE--ee-CCCCCcHHHHHHHhcCCCcCCCCCCCCCCCCcEEEE----------CCeEEehhhhhHHhcCCCEE
Confidence 369999984 44 579999999999999999999999999999999999 79999999999999999999
Q ss_pred EEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCC
Q 000629 94 TTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGY 173 (1383)
Q Consensus 94 ~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy 173 (1383)
+|||||++ ..+||||+||+++|++|||||||||||++++||+ ++|+|+ ++||+++|+|||||||||
T Consensus 68 ~T~egl~~--~~~~~~q~a~~~~~~~qcG~ctpg~~~~~~~ll~-----~~~~p~-------~~~i~~~l~gnlcrctgy 133 (848)
T TIGR03311 68 TTVEGLTE--REKDVYAWAFAKAGAVQCGFCIPGMVISAKALLD-----KNPNPT-------EAEIKKALKGNICRCTGY 133 (848)
T ss_pred EecCCCCC--CCCCHHHHHHHHcCCCcCCCCchhHHHHHHHHHh-----cCCCCC-------HHHHHHHHhcCccccCCh
Confidence 99999985 3479999999999999999999999999999994 357774 999999999999999999
Q ss_pred hhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccccCCceeecCCceEEecCCHHHHH
Q 000629 174 RPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLLDVKGSWHSPISVQELR 253 (1383)
Q Consensus 174 ~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~P~sl~e~l 253 (1383)
++|++|++.++..
T Consensus 134 ~~i~~a~~~~~~~------------------------------------------------------------------- 146 (848)
T TIGR03311 134 VKIIKAVRLAAKA------------------------------------------------------------------- 146 (848)
T ss_pred HHHHHHHHHHHHh-------------------------------------------------------------------
Confidence 9999999854310
Q ss_pred HHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhhhchhh
Q 000629 254 NVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEA 333 (1383)
Q Consensus 254 ~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~~~~~~ 333 (1383)
++
T Consensus 147 --~~---------------------------------------------------------------------------- 148 (848)
T TIGR03311 147 --FR---------------------------------------------------------------------------- 148 (848)
T ss_pred --hc----------------------------------------------------------------------------
Confidence 00
Q ss_pred hhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhccCCCCCCCceE
Q 000629 334 LMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERPPLDSRSIL 413 (1383)
Q Consensus 334 ~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~~~~L~~~eil 413 (1383)
.
T Consensus 149 --------------------------------------~----------------------------------------- 149 (848)
T TIGR03311 149 --------------------------------------E----------------------------------------- 149 (848)
T ss_pred --------------------------------------c-----------------------------------------
Confidence 0
Q ss_pred EEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCcccccHHH
Q 000629 414 LSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARR 493 (1383)
Q Consensus 414 ~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~ 493 (1383)
. + + . |.
T Consensus 150 -------------------------------~------------------~-----~---------------~-~~---- 155 (848)
T TIGR03311 150 -------------------------------E------------------I-----E---------------P-PR---- 155 (848)
T ss_pred -------------------------------c------------------c-----c---------------c-cc----
Confidence 0 0 0 0 00
Q ss_pred HHHHHcCCCCChHHHHHHHHHHhhcCCCCCCCCcHHHHhHHHHHHHHHHHHHhhhhccCCCccccCCCCCCCcccccccc
Q 000629 494 VEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGTSIPAYRSSLAVGFLYEFFGSLTEMKNGISRDWLCGYSNNVSLKDSHVQ 573 (1383)
Q Consensus 494 ~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~~s~eYR~~la~~L~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (1383)
T Consensus 156 -------------------------------------------------------------------------------- 155 (848)
T TIGR03311 156 -------------------------------------------------------------------------------- 155 (848)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccC
Q 000629 574 QNHKQFDESKVPTLLSSAEQVVQLSREYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEF 653 (1383)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~ 653 (1383)
. + . ...||++++|+|+++||||+++|++|+. +|||||++++|||++||+|++||+
T Consensus 156 ---------~------------~--~-~~~iG~~~~R~d~~~kvtG~~~Y~~Di~-~pgmL~a~~vrSp~ahA~I~~ID~ 210 (848)
T TIGR03311 156 ---------G------------E--P-KGKLGENFPRVDAVPKVLGEGVYVDDMQ-IEGMLYGSALRSKYPRALVKSIDI 210 (848)
T ss_pred ---------c------------c--c-cCCCCCccCCcChhhhCcccccccccCC-CCCCEEEEEEeCCCCCEEEEeeEH
Confidence 0 0 0 0148999999999999999999999997 689999999999999999999999
Q ss_pred cccCCCCCEEEEEEcCCCCCCCCCCCccccCCCcc-ccc-CCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCC
Q 000629 654 KSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEP-LFA-DELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEP 731 (1383)
Q Consensus 654 s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~~~~~p-~la-~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p 731 (1383)
|+|++||||++|+|++|+|. ..+++. ...++| +|+ +++|||+|||||+|||+|+++|++|+++|+|+| |+| |
T Consensus 211 s~A~a~PGV~aVvt~~Dip~-~~~~g~--~~~~~~~~~a~~~~Vry~Ge~VA~VvA~t~~~A~~A~~~V~Vey--e~l-p 284 (848)
T TIGR03311 211 TVALKHPGVVAVLTAKDIPG-NRKIGH--IFKDWPALIAVGEITRYVGDAVALVAAKSKEALREALNLIKVDY--EEL-P 284 (848)
T ss_pred HHHHhCCCcEEEEeHHHCCC-ccCCCC--CCCCccccccCCCEEEEcCCeEEEEEECCHHHHHHHhCCCcEEE--ecC-C
Confidence 99999999999999999982 122322 223444 343 689999999999999999999999999999999 889 9
Q ss_pred CccCHHHHhhcCCC--cccCCccc---cCCCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeC
Q 000629 732 PILSVEEAVDRSSL--FEVPSFLY---PKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSS 806 (1383)
Q Consensus 732 ~v~~~~~Al~~~a~--~~~~~~~~---~~~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~s 806 (1383)
+++|+++|++++++ |+ ++|+. ...+||++++|++|+++ ||++|++++|+|+||||++++|+|++ |+|+||+|
T Consensus 285 ~v~d~~~A~~~~a~~i~~-~~Nv~~~~~~~~Gdv~~af~~A~~v-ve~~y~~~~~~h~~mEp~~~vA~~~~-~~l~v~~s 361 (848)
T TIGR03311 285 PLTSPEEALAEGAPAIHP-KGNILSEEHVVRGDAEEALENSAYV-VTNHYSTPFTEHAFLEPESALAVPEG-DGVIIYTS 361 (848)
T ss_pred CcCCHHHHhcCCCCeECC-CCCCcceeeecCCCHHHHhhcCCeE-EEEEEEECCEeeeecCCceEEEEEeC-CeEEEEEC
Confidence 99999999998874 43 34542 36789999999999996 99999999999999999999999984 56999999
Q ss_pred CCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEE
Q 000629 807 IQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKIT 886 (1383)
Q Consensus 807 tQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~ 886 (1383)
||+|+.+|..+|++||||++||||+.+++|||||+|.... .+..+|++|+++||||||+|||+|+|+++.+||++.++
T Consensus 362 tQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~gRPVkl~~sR~E~~~~~~~R~~~~~~ 439 (848)
T TIGR03311 362 TQGVYDEQRELASLLGLPKEKIRVINKFVGGGFGGKEDMS--VQHHAALLAWATKRPVKVTLTRKESILVHPKRHAMEMT 439 (848)
T ss_pred CcCHHHHHHHHHHHhCCChHHEEEEeCCCCCcCCcccccc--HHHHHHHHHHHhCCCEEEEechHHhhhccCCCCceEEE
Confidence 9999999999999999999999999999999999998643 34678899999999999999999999999999999999
Q ss_pred EEEEECCCCcEEEEEEEEEecCCCCCCCCC-chhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHH
Q 000629 887 YSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEA 965 (1383)
Q Consensus 887 ~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~ 965 (1383)
+|+|+|+||+|++++++++.|+|+|.+++. ++.....++.++|+|||++++++.|+||++|.|+|||||.||++|++|+
T Consensus 440 ~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~ 519 (848)
T TIGR03311 440 FTTGCDEAGNLTAMKADIIADTGAYASLGGPVLQRACTHAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFGVTQSNFAMEC 519 (848)
T ss_pred EEEEECCCCcEEEEEEEEEEccccCCCccHHHHHHHHHhcCCCccCceEEEEEEEEECCCCCCCCccCCChhHHHHHHHH
Confidence 999999999999999999999999998765 4445556778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCcccc-C-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceece
Q 000629 966 VIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAE-Y-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVC 1043 (1383)
Q Consensus 966 ~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~-~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia 1043 (1383)
+||++|++|||||+|||+||++++++. +++|+.++ + .+++||+++++. |.+ ++++|++
T Consensus 520 ~mD~lA~~lg~DP~E~R~rN~~~~gd~-----~~~g~~~~~~~~~~~~l~~~~~~--~~~-------------~~~~G~~ 579 (848)
T TIGR03311 520 NLNLLAEKVGLSPWEIRFKNAVEPGDT-----LPNGQVVSEGTAIKETLLAVKEV--YEK-------------SPCAGIA 579 (848)
T ss_pred HHHHHHHHhCcCHHHHHHHhCCCCCCc-----CCCCceeCCCchHHHHHHHHHHH--hhh-------------ccCCeEE
Confidence 999999999999999999999988764 24677776 3 599999999874 431 1345666
Q ss_pred ecceEeeccCC---CcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccC
Q 000629 1044 RLPIVHEVTLR---STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQ 1120 (1383)
Q Consensus 1044 ~a~~~~g~~~~---~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~ 1120 (1383)
+.....|.+.. .+.+.++++ ||+|+|.+|++|||||++|+++||+||+||| |+|+|+|..+||+.+|+
T Consensus 580 ~~~~~~g~~~~~~~~~~~~~~~~-DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~ 650 (848)
T TIGR03311 580 CAFKNSGVGVGIPDTGRCNLAVE-DGKVHIRTSAACIGQGLGTVLTQIVCETTGL--------PPEVIVCELPDTALTPD 650 (848)
T ss_pred EEEEEeccccCCCCcceEEEEEc-CCEEEEEECCCCcCcCHHHHHHHHHHHHHCC--------CHHHEEEEcCCCCCCCC
Confidence 54333343332 356777777 9999999999999999999999999999999 99999999999999999
Q ss_pred CCcCcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCc--CHHHHHHHHhhcCceeEEEEeeccCCCcccccceeE
Q 000629 1121 GGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNV--EWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGA 1198 (1383)
Q Consensus 1121 ~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~~~~~~~--~~~~~~~~a~~~~~~l~a~~~~~~~~~~~~~~~~ga 1198 (1383)
+++|+|||+|+++|+||++||++||+||+......+. .+.+ .|.++. ..+.+.+.|.. ++..|+|++
T Consensus 651 ~~gt~aSR~t~~~G~Av~~Aa~~l~~~l~~~~~~~l~-~~~~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~ 719 (848)
T TIGR03311 651 SGTTTASRQSLFTGEATRRAAAKLKEALRGRTLAELE-GEEFYGEYHSIT-------DPLNSDKENPV---SHVGYGYAT 719 (848)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhcCHHHcC-CCEEeecccccc-------CcceeeccCCC---CccccceEE
Confidence 9999999999999999999999999999754221110 0000 011110 01333333321 112245566
Q ss_pred EEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCC
Q 000629 1199 AVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPK 1278 (1383)
Q Consensus 1199 ~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~ 1278 (1383)
+++|| | +|| +|+|+++++|||++|||.+++||||||++||||+||+|++.|| +|++++ +|+||+||++.|+|+
T Consensus 720 ~~~eV--d-~tG--~v~r~~~v~D~G~vINP~~veGQieGG~~qGlG~AL~Ee~~~d-~G~~~~-~~~dY~iPt~~D~P~ 792 (848)
T TIGR03311 720 QVVIL--D-DAG--KVEKVVAAYDVGRAINPLNLEGQIEGGIVMGLGYALTEDFPLR-EGIPTA-KFGTLGLFRSTQVPE 792 (848)
T ss_pred EEEEE--C-CCC--eEEEEEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhcCcEEec-CCeecC-ChhhccCCChhhCCC
Confidence 55554 6 899 6789999999999999999999999999999999999999998 599886 599999999999995
Q ss_pred eeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHH
Q 000629 1279 KFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVK 1351 (1383)
Q Consensus 1279 ~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~ 1351 (1383)
|+++++|++ +|.+|||+||+||+++++ +++||+|||++|++ ++++++|+||||||
T Consensus 793 -i~v~~ve~~-~~~~p~GaKGvGE~~~~~---~~~AIanAV~~A~G-------------~r~~~lP~~p~~v~ 847 (848)
T TIGR03311 793 -IETHLIEKN-GTPLAYGAKGVGELATIP---TAPAVAGAYYRFDG-------------KFRLSLPLENTPYT 847 (848)
T ss_pred -eEEEEEeCC-CCCCCCCCccCCCCcccc---hHHHHHHHHHHhHC-------------cCcccCCCCccccc
Confidence 999999865 688999999999999998 56699999999995 78899999999996
No 8
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=100.00 E-value=1.1e-153 Score=1467.79 Aligned_cols=723 Identities=34% Similarity=0.517 Sum_probs=653.1
Q ss_pred CCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCcccc
Q 000629 604 VGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTI 683 (1383)
Q Consensus 604 vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~ 683 (1383)
|||+++|+|+.+||||+++|++|+..+|||||++++|||++||+|++||+|+|++||||++|+|++|+| +.|.. ...
T Consensus 1 ~G~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~~iD~s~A~~~pGV~~V~t~~D~p--~~~~~-g~~ 77 (758)
T TIGR02965 1 VGTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVVDVLTAADIP--GENDI-SPI 77 (758)
T ss_pred CCCCccCcchHhhCceeeEcccCCCCCCCCEEEEEEecCCCceEEeecchHHHhcCCCcEEEEEHHHCC--CCCCC-CCC
Confidence 699999999999999999999999546899999999999999999999999999999999999999998 43321 122
Q ss_pred CCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCCcccCCccccCCCCChhhh
Q 000629 684 FGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKG 763 (1383)
Q Consensus 684 ~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~e~a 763 (1383)
..++|+|++++|||+|||||+|||+|+++|++|+++|+|+| |+| |+++|+++|++++++...+. .....||++++
T Consensus 78 ~~~~~~la~~~Vry~Ge~va~VvA~~~~~A~~A~~~i~V~y--e~l-p~v~d~~~Al~~~a~~~~~~--~~~~~Gd~~~a 152 (758)
T TIGR02965 78 IHDDPLLADGKVEFVGQPIFAVIATSRDAARRAARLAKIEY--EEL-PAVLDIEEALAAGSRFVTPP--LTLERGDAEAA 152 (758)
T ss_pred CCCceeccCCEEEEcCCeEEEEEECCHHHHHHHhhccEEEE--EcC-CccCCHHHHhcCCCCcccCc--ccccCCCHHHH
Confidence 35889999999999999999999999999999999999999 899 99999999999887432111 13578999999
Q ss_pred ccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCCC
Q 000629 764 MNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKA 843 (1383)
Q Consensus 764 f~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~ 843 (1383)
|++|+++ ||++|++++|+|+||||++|+|+||++|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.
T Consensus 153 f~~a~~v-ve~~y~~~~~~h~~mEp~~~vA~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~ 231 (758)
T TIGR02965 153 LAAAPHR-LSGEMRIGGQEHFYLEGQIALAVPGEDGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGGKE 231 (758)
T ss_pred HhhCCEE-EEEEEEECCEeEEecCCceEEEEEcCCCCEEEEECCCChHHHHHHHHHHhCCChHHEEEEeCCCccCccccc
Confidence 9999996 999999999999999999999999977889999999999999999999999999999999999999999998
Q ss_pred CCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-chhhhc
Q 000629 844 IKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNM 922 (1383)
Q Consensus 844 ~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~~~~ 922 (1383)
....++++.||++|+++||||||+|||+|+|+++.+||++.+++|+|+|+||+|++++++++.|+|+|.+.+. ++....
T Consensus 232 ~~~~~~~~~aa~~A~~~grPVk~~~sR~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~ 311 (758)
T TIGR02965 232 TQANLFACLAAVAARKTGRPVKLRPDRDDDMMITGKRHDFLVDYDVGFDDEGRILGVDIDMAARCGFSADLSGPVTDRAL 311 (758)
T ss_pred cccchHHHHHHHHHHHHCCCEEEEechHHhhhhccCccceEEEEEEEECCCCCEEEEEEEEeecCcccCCcchHHHHHHH
Confidence 6443556889999999999999999999999999999999999999999999999999999999999987654 444555
Q ss_pred cccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCc
Q 000629 923 IGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGE 1002 (1383)
Q Consensus 923 ~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~ 1002 (1383)
....++|+|||++++++.|+||++|+|+|||||.||++|++|++||++|++|||||+|||+||++++++. +.+++|+
T Consensus 312 ~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~Nl~~~g~~---~~~~~g~ 388 (758)
T TIGR02965 312 FHADNAYFLPDVTITSHPLKTNTQSNTAFRGFGGPQGMVAIERIMDEVARALGKDPLEVRKRNFYGKDER---NVTPYHQ 388 (758)
T ss_pred HhcCCcccCCceEEEEEEEEcCCCCCccccCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHcCCCCCCC---CcCCCce
Confidence 5678999999999999999999999999999999999999999999999999999999999999988753 3456687
Q ss_pred cccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccCC-----CcceEEEEcCCCcEEEEeCCcc
Q 000629 1003 YAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVGGIE 1076 (1383)
Q Consensus 1003 ~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~-----~~~a~v~l~~DGsv~v~~g~~e 1076 (1383)
.+++ .+++||+++++.++|++|++...++|..++|++||+|+++..++.++. .+.+.|+|++||+|+|++|.+|
T Consensus 389 ~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~i~~dG~v~v~~g~~e 468 (758)
T TIGR02965 389 TVEDNIIHEIIEELEESSDYAARRAAIRAFNAASPVLKKGIALTPVKFGISFTVTHLNQAGALVHVYTDGSIHLNHGGTE 468 (758)
T ss_pred eccCCcHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCceeEEEEeeeeccccccccccCccceEEEEeCCCcEEEEECCCC
Confidence 7766 999999999999999998887777887788889999999888877642 5789999999999999999999
Q ss_pred CCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 000629 1077 MGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQ 1156 (1383)
Q Consensus 1077 ~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~ 1156 (1383)
||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||++++++++
T Consensus 469 ~GQG~~T~laQIaAe~LGi--------~~d~V~v~~~DT~~~p~~~gT~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~~l 540 (758)
T TIGR02965 469 MGQGLNTKVAQVVAEEFQV--------DIDRVKITATDTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEKW 540 (758)
T ss_pred CCCCHHHHHHHHHHHHhCC--------CHHHEEEEecCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 99999999999999999999999999999999999999999999999988875
Q ss_pred ccC---------------CCcCHHHHHHHHhhcCceeEEEEeeccCCC----------cccccceeEEEEEEEEECCCCc
Q 000629 1157 GQM---------------GNVEWETLIQQAHLQSVNLSASSMYVPDFT----------SVQYLNYGAAVSEVEVNLLTGE 1211 (1383)
Q Consensus 1157 ~~~---------------~~~~~~~~~~~a~~~~~~l~a~~~~~~~~~----------~~~~~~~ga~~aEVEVD~~TG~ 1211 (1383)
+.+ ..++|.+++..++.....|.+.++|.++.. ++.+|+||+|++|||||++||+
T Consensus 541 ~~~~~~l~~~~g~v~~~~~~~~~~~l~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~ 620 (758)
T TIGR02965 541 QVPAEDVRFAPNHVRVGEQRVPFAELVQQAYFARVQLSSTGFYKTPKIHWDRAKGRGRPFYYFAYGAACSEVSVDTLTGE 620 (758)
T ss_pred CCCHHHEEEECCEEEeCCCccCHHHHHHHHhhcCCCcEEEEEEcCCCccccccccCCCCcceeeeeEEEEEEEEecCCCc
Confidence 421 247899999887765567888888865321 2336789999999999999999
Q ss_pred EEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecC-CCC
Q 000629 1212 TTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNS-GHH 1290 (1383)
Q Consensus 1212 v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~-~~~ 1290 (1383)
++|+|+++++|||++|||.+++||||||++||||+||+|++.||++|+++|+||+||++|++.|+|++|+++++|+ +++
T Consensus 621 v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d~~G~~l~~~~~dY~iPta~DiP~~~~~~~~e~~~~~ 700 (758)
T TIGR02965 621 YKVLRADILHDVGRSLNPAIDIGQVEGGFVQGMGWLTTEELVWDEKGRLRTHAPSTYKIPAASDRPKDFNVRLFEWSENR 700 (758)
T ss_pred EEEEEEEEEEecCCcCCHHHhhhhhhhhhhhhhhHhhccceEECCCcCCcCCCCcCcCCCChhhCCCccEEEEecCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999994499999994 445
Q ss_pred CCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcCC
Q 000629 1291 KKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGL 1356 (1383)
Q Consensus 1291 p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~ 1356 (1383)
|.||||+||+||+++++.+++++||.|||++|++- ..++.+++|+|||+||++|+.
T Consensus 701 ~~~p~GaKGvGE~~~~~~aav~~AI~nAi~~a~g~----------~~~~~~~lP~tpe~v~~al~~ 756 (758)
T TIGR02965 701 EDTIHRSKAVGEPPLMLGISVLFAISDAVASVADY----------RVCPRLDAPATPERVLMAVEA 756 (758)
T ss_pred CCCCcCCcccCccchhhHHHHHHHHHHHHHHhhcc----------CCCCCCCCCCCHHHHHHHHHh
Confidence 78999999999999998778999999999999851 111458999999999998864
No 9
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=3.9e-148 Score=1412.54 Aligned_cols=698 Identities=24% Similarity=0.290 Sum_probs=626.9
Q ss_pred ccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCccccCCCc
Q 000629 608 ITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSE 687 (1383)
Q Consensus 608 ~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~~~~~ 687 (1383)
++|+|+..||||+++|++|+. +|||||+++||||++||+|++||+|+|++||||++|+|++|+| + +.+......++
T Consensus 1 ~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~vvrSp~ahA~I~siD~s~A~a~pGV~~V~t~~D~p--~-~~g~~~~~~d~ 76 (746)
T TIGR03194 1 VPLVDGVEKVTGKAKYTADLA-APGALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCP--V-PYGVLPIAENE 76 (746)
T ss_pred CcCcchHhhCccccccccCCC-CCCCEEEEEEecCCccEEEeeccHHHHHhCCCcEEEEeHHHCC--c-ccCCCCCCCCC
Confidence 479999999999999999997 5899999999999999999999999999999999999999998 3 33322223588
Q ss_pred ccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCC--ccc-CCcc---ccCCCCChh
Q 000629 688 PLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEV-PSFL---YPKPVGDIS 761 (1383)
Q Consensus 688 p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~--~~~-~~~~---~~~~~Gd~e 761 (1383)
|+|++++|||+|||||+|||+|+++|++|+++|+||| |+| |+++|+++|++++++ |+. ++|+ ....+||++
T Consensus 77 ~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~d~~~Al~~~a~~ih~~~~~Nv~~~~~~~~Gd~~ 153 (746)
T TIGR03194 77 YPLARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEY--EEL-PAYMDPKAAMKAGAILLHDNKPGNIEREVHNEFGDVA 153 (746)
T ss_pred ccCCCCeEEEcCCeEEEEEECCHHHHHHHhcCCcEEE--ecC-CCcCCHHHHhcCCCCccCCCCCCcEEEEEeeccCCHh
Confidence 9999999999999999999999999999999999999 899 999999999998875 432 3454 246789999
Q ss_pred hhccccCeeeEEEEEEecccccCCCCCCceEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCCC
Q 000629 762 KGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFG 840 (1383)
Q Consensus 762 ~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~-~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG 840 (1383)
++|++|+++ ||++|++++|+|+||||++|+|+|++ +|+|+||+|||+|+.+|..||++||||++||||+.+++|||||
T Consensus 154 ~a~~~a~~v-ve~~~~~~~~~h~~mEp~~~~A~~~~~~~~l~v~~stQ~p~~~r~~va~~Lglp~~kVrV~~~~vGGgFG 232 (746)
T TIGR03194 154 AAFAEADLI-REKTFTCAEVNHAHMEPNATLAEYDPVRGMLTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFG 232 (746)
T ss_pred HHhccCCEE-EEEEEEECCEeEEccCCCeEEEEEeCCCCeEEEEECCCchHHHHHHHHHHhCCCHHHeEEEcCCCcCccc
Confidence 999999996 99999999999999999999999985 5789999999999999999999999999999999999999999
Q ss_pred CCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-chh
Q 000629 841 GKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMP 919 (1383)
Q Consensus 841 ~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~~ 919 (1383)
+|... .++++.||++|+++||||||+|||+|+|.++.+||++.+++|+|+|+||+|+|++++++.|+|+|.+++. ++.
T Consensus 233 ~K~~~-~~~~~~aal~a~~~grPVk~~~~ReE~~~~~~~R~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~ 311 (746)
T TIGR03194 233 ARVEP-LNFEIIAGLLARKAKGTVRLLQTREETFITHRGRPQTYVKMKIGLKKDGKITACAAEVVQRGGAYAGYGIVTIL 311 (746)
T ss_pred ccccc-chHHHHHHHHHHHhCCCEEEecchhhhhhcCCCCCceEEEEEEEECCCCeEEEEEEEEeecccccCCcchHHHH
Confidence 99863 4467889999999999999999999999999999999999999999999999999999999999998775 434
Q ss_pred hhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccC
Q 000629 920 SNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESS 999 (1383)
Q Consensus 920 ~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~ 999 (1383)
.....+.++|+|||++++++.|+||++|+|+|||||.||++|++|++||++|++|||||+|||+||+++++ +.++
T Consensus 312 ~~~~~~~g~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~lA~~lg~DPve~R~~N~~~~~-----~~~~ 386 (746)
T TIGR03194 312 YAGALLHGLYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRAAFESLLDEMAAELGIDPFAIRRRNLLQAP-----TVTM 386 (746)
T ss_pred HHHHhcCCCcccceEEEEEEEEEcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCcCCC-----CCCC
Confidence 45556789999999999999999999999999999999999999999999999999999999999999765 4456
Q ss_pred CCccccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccC---------CCcceEEEEcCCCcEE
Q 000629 1000 AGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTL---------RSTPGKVSILSDGSVV 1069 (1383)
Q Consensus 1000 ~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~---------~~~~a~v~l~~DGsv~ 1069 (1383)
+|+.+++ ++++||++++++++|++|++.. +++||+|+++..++.+. .++++.|++++||+|+
T Consensus 387 ~g~~~~s~~~~~~l~~~~e~~~w~~~~~~~--------~~~rGiG~a~~~~~~~~~~~~~~~~~~~~~a~v~l~~dG~v~ 458 (746)
T TIGR03194 387 NDLRVMSYGLPECLEKVEQASGWEERKGRL--------PKGRGLGIACSHFVSGSAKPIHFTGEPHATVALKLDFDGGIT 458 (746)
T ss_pred CCceecCCCHHHHHHHHHHhcCchhhhhhc--------cccEEEEEEEEEEeccCCcccccCCCCCceEEEEEcCCccEE
Confidence 7877766 9999999999999998765421 24577777777764432 2578999999999999
Q ss_pred EEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHH
Q 000629 1070 VEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLT 1149 (1383)
Q Consensus 1070 v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~ 1149 (1383)
|.+|++|||||++|+++||+||+||+ |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+
T Consensus 459 v~~g~~e~GqG~~T~~~qiaAe~LGi--------p~d~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~~l~ 530 (746)
T TIGR03194 459 LLTGAADIGQGSSTIASQVAAEVLGV--------RLSRIRVISADSALTPKDNGSYSSRVTFMVGNAAIDAAEELKGVLV 530 (746)
T ss_pred EEEcCCCCCCCHHHHHHHHHHHHhCC--------CHHhEEEEccCCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcc------------------CCCcCHHHHHHHHhhcCceeEEEEeeccCCC------------cccccceeEE
Q 000629 1150 LLRERLQGQ------------------MGNVEWETLIQQAHLQSVNLSASSMYVPDFT------------SVQYLNYGAA 1199 (1383)
Q Consensus 1150 ~~a~~l~~~------------------~~~~~~~~~~~~a~~~~~~l~a~~~~~~~~~------------~~~~~~~ga~ 1199 (1383)
++++++++. ...++|.+++..++.....|.+.++|..... ...+|+|+|+
T Consensus 531 ~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 610 (746)
T TIGR03194 531 AAAAKKLDAREEDIECAGEMFFVSGSADPGLSFQEVVKAALVDSGTITVKGTYTCPPEFQGGKKRGGAVGSTMGFSYAAQ 610 (746)
T ss_pred HHHHHHhCCCHHHEEEECCEEEECCCCCCceeHHHHHHHhcccCCCceEEEEecCCCccccccccccccCcccccceeEE
Confidence 999887542 1136899998655544446888888862110 1125789999
Q ss_pred EEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCe
Q 000629 1200 VSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKK 1279 (1383)
Q Consensus 1200 ~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~ 1279 (1383)
++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.|| +|+++|+||++|+||++.|+|+
T Consensus 611 ~aeVeVD~~TG~v~v~~~~~~~D~G~viNP~~v~gQi~Gg~~~GiG~aL~E~~~~d-~G~~~~~~l~~Y~ipt~~d~P~- 688 (746)
T TIGR03194 611 VVEVSVDEETGKVTVHKVWVAVDCGKAINPLAVEGQVQGAVWMGMGQALSEETVYD-NGRMKHASLLDYRVPTIVESPD- 688 (746)
T ss_pred EEEEEEECCCCCEEEEEEEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHhcCceEec-CCeECCCChhhccCCChhccCC-
Confidence 99999999999999999999999999999999999999999999999999999998 4999999999999999999995
Q ss_pred eEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhc
Q 000629 1280 FNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELC 1354 (1383)
Q Consensus 1280 ~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al 1354 (1383)
|+++++|++ +|.||||+||+||+++++ +++||+|||++|+| ++++++|+|||+||++|
T Consensus 689 i~v~~ve~~-~~~~p~Gakg~GE~~~~~---~~~AIanAI~~A~G-------------~r~~~lP~tpe~v~~al 746 (746)
T TIGR03194 689 IEVIIVESM-DPNGPFGAKEASEGALAG---FLPAIHNAVYDAVG-------------VRATDLPLTPDRVTEAL 746 (746)
T ss_pred eEEEEEeCC-CCCCCCCCCcCCCCcccc---hHHHHHHHHHHhhC-------------CCcccCCCCHHHHHhhC
Confidence 999999864 678999999999999997 66799999999995 67899999999999875
No 10
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=100.00 E-value=7.7e-148 Score=1416.00 Aligned_cols=708 Identities=24% Similarity=0.308 Sum_probs=633.3
Q ss_pred CCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCC---C
Q 000629 603 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI---G 679 (1383)
Q Consensus 603 ~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~---~ 679 (1383)
+|||+++|+|+.+||||+++|++|+. +|||||++++|||++||||++||+++|++||||++|+|++|+| +.|+ +
T Consensus 2 ~vG~~~~r~d~~~kvtG~~~Y~~D~~-~~gmL~a~~~rSp~aharI~siD~~~A~~~pGV~~Vvt~~D~p--~~~~~~~~ 78 (759)
T PRK09970 2 AIGKSIMRVDAIAKVTGRAKYTDDYV-MAGMLYAKYVRSPIAHGKVKSIDTEEARSLPGVEAVFTWEDVP--DIPFPTAG 78 (759)
T ss_pred CCCCCCcCcchHHhCcCCccccccCC-CCCCEEEEEEcCCCceEEEeeeeHHHHHhCCCcEEEEeHHHcC--Cccccccc
Confidence 58999999999999999999999997 6899999999999999999999999999999999999999998 4432 1
Q ss_pred cc------ccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCC--cccCCc
Q 000629 680 SK------TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEVPSF 751 (1383)
Q Consensus 680 ~~------~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~--~~~~~~ 751 (1383)
.. ....++|+|++++|||+|||||+|||+|+++|++|+++|+||| |+| |+++|+++|++++++ |+..+|
T Consensus 79 ~~~~~~~~~~~~~~~~la~~~Vr~~G~~VAaVvA~~~~~A~~A~~~i~Vey--e~l-p~v~~~~~Al~~~a~~ih~~~~n 155 (759)
T PRK09970 79 HPWSLDPNHRDIADRALLTRHVRHHGDAVAAVVARDELTAEKALKLIKVEY--EEL-PVITDPEAALAEGAPPIHNGRGN 155 (759)
T ss_pred cccCCCCCCCCCCCccCcCCEEEEcCCeEEEEEeCCHHHHHHHhCCCcEeE--EeC-CccCCHHHHhCCCCCccCCCCCc
Confidence 00 0113779999999999999999999999999999999999999 899 999999999988874 432245
Q ss_pred cc---cCCCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcE
Q 000629 752 LY---PKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNV 828 (1383)
Q Consensus 752 ~~---~~~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV 828 (1383)
+. ....||++++|++|+++ ||++|++++|+|+||||++|+|+|+++|+|+||+|||+|+.+|..+|++||||++||
T Consensus 156 i~~~~~~~~Gd~~~a~~~a~~v-ve~~y~~~~~~h~~mEp~~~iA~~~~~g~l~v~~stQ~p~~~~~~ia~~Lglp~~~V 234 (759)
T PRK09970 156 LLKQSTMSTGNVQQTIKAADYQ-VQGHYETPIVQHCHMENVTSYAYMEDDGRITIVSSTQIPHIVRRVVGQALGIPWGKV 234 (759)
T ss_pred eeeeeeeccCChhHhhccCCEE-EEEEEEECCEeEeccCCceEEEEECCCCCEEEEECCCcHHHHHHHHHHHhCCCHHHE
Confidence 43 36789999999999996 999999999999999999999999877899999999999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCCccHHHHHHHHHHHHc-CCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEec
Q 000629 829 RVITRRVGGAFGGKAIKAMPVATACALAAYKL-CRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILID 907 (1383)
Q Consensus 829 rV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~-gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d 907 (1383)
||+.+++|||||+|.+.. . +..||++|+++ ||||||+|||+|+|+++.+||++.+++|+|+|+||+|+|++++++.|
T Consensus 235 rV~~~~vGGgFG~K~~~~-~-~~~aa~la~~~~grPVk~~~~R~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d 312 (759)
T PRK09970 235 RVIKPYVGGGFGNKQDVL-E-EPLAAFLTSKVGGRPVKVSLSREECFLATRTRHAFTIDIKMGVNRDGTLKGYSLDVLSN 312 (759)
T ss_pred EEEeCCCCCCcCcccccC-H-HHHHHHHHHHhcCCCeEEeechhHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEeec
Confidence 999999999999998643 3 45667788888 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC-chhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhc
Q 000629 908 AGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINL 986 (1383)
Q Consensus 908 ~Gay~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl 986 (1383)
+|+|.+++. ++........++|+|||++++++.|+||++|+|+|||||.||++|++|++||++|++|||||+|||+||+
T Consensus 313 ~Gay~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~N~ 392 (759)
T PRK09970 313 TGAYASHGHSIASAGGNKVAYLYPRCAYKYSSKTVYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEFRLRNA 392 (759)
T ss_pred cccCCCcchHHHHHHHhhcCCCccCceEEEEEEEEECCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhC
Confidence 999998765 3344555678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccCC-CccccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccCC-----CcceE
Q 000629 987 HTHKSLNLFYESSA-GEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGK 1059 (1383)
Q Consensus 987 ~~~~~~~~~~~~~~-g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~-----~~~a~ 1059 (1383)
+++++. +++ |..+++ ++++||+++++.++|+++++..+. .+.|++||+|+++..++.+.. .+.+.
T Consensus 393 ~~~g~~-----~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~ 464 (759)
T PRK09970 393 AREGDA-----NPLSGKRIYSAGLPECLEKGRKIFEWDKRRAECKN---QQGNLRRGVGVACFSYTSGTWPVGLEIAGAR 464 (759)
T ss_pred CCCCCc-----CCCCCeeecCCCHHHHHHHHHHhcCchhhhHhHhh---hcCCceEEEEEEEEEEeecCCCCCCCcceEE
Confidence 987643 332 666665 999999999999999987664331 234577899988888877543 48899
Q ss_pred EEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcC-CCCcccCCCcCcccccccchHHHHH
Q 000629 1060 VSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQA-DTLSVIQGGFTAGSTTSEASCQVVR 1138 (1383)
Q Consensus 1060 v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~-dT~~~p~~~~t~aSr~t~~~g~Av~ 1138 (1383)
|+|++||+|+|.+|.+|||||++|+++||+||+||+ |+++|+|..+ ||+.+|++++|+|||+|+++|.|++
T Consensus 465 v~i~~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi--------~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av~ 536 (759)
T PRK09970 465 LLMNQDGTVQVQSGATEIGQGSDTVFSQMVAETVGI--------PVSDVRVISTQDTDVTPFDPGAYASRQSYVAGPAIR 536 (759)
T ss_pred EEEccCceEEEEECCCCcCCCHHHHHHHHHHHHhCC--------CHHhEEEEccCCCCCCCCCCCCchhhhHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999988 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc--------C--------C--CcCHHHHHHHHhhc---CceeEEEEeeccCCCccccccee
Q 000629 1139 DCCNILVERLTLLRERLQGQ--------M--------G--NVEWETLIQQAHLQ---SVNLSASSMYVPDFTSVQYLNYG 1197 (1383)
Q Consensus 1139 ~A~~~L~~rl~~~a~~l~~~--------~--------~--~~~~~~~~~~a~~~---~~~l~a~~~~~~~~~~~~~~~~g 1197 (1383)
+||++||+||+.+++++++. + + .++|.+++..++.. ..++...+.|.+.. .+|+|+
T Consensus 537 ~Aa~~lr~~l~~~aa~~l~~~~~~l~~~~G~v~~~~~~~~~~~~~~la~~a~~~~~~~~~~~~~~~~~~~~---~~~~~~ 613 (759)
T PRK09970 537 KAALELKEKILAHAAVMLHQSAMNLDIIDGHIVVKRPGEPLMSLEELAMDAYYHPERGGQITAESSIKTTT---NPPAFG 613 (759)
T ss_pred HHHHHHHHHHHHHHHHHhCCChHHEEEECCEEEECCCCCccccHHHHHHHhhccccCCCceeEEEEecCCC---CCCceE
Confidence 99999999999998876532 1 1 37899998777652 23467777776532 247999
Q ss_pred EEEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCC-CcccccCCCCCCCCCCCCC
Q 000629 1198 AAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSD-GLVVSEGTWTYKIPTLDTI 1276 (1383)
Q Consensus 1198 a~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~-G~~l~~~~~dY~iP~~~Di 1276 (1383)
|+++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||++ |+++++||+||++|++.|+
T Consensus 614 a~~aeVeVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~qGiG~aL~E~~~~d~~~G~~~~~~~~dY~ip~~~d~ 693 (759)
T PRK09970 614 CTFVDVEVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDEKTGVVRNPNLLDYKLPTMMDL 693 (759)
T ss_pred EEEEEEEEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHHHHHHHHhcceeEEcCCCCeECCCChhhccCCCcccC
Confidence 999999999999999999999999999999999999999999999999999999999985 9999999999999999999
Q ss_pred CCeeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcCC
Q 000629 1277 PKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGL 1356 (1383)
Q Consensus 1277 P~~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~ 1356 (1383)
|+ |++++++++ +|.+|||+||+||+++++ +++||+|||++|++ ++++++|+|||+||++|..
T Consensus 694 P~-i~v~~ve~~-~~~~p~GaKgvGE~~~~~---~~~AIanAi~~A~G-------------~r~~~lP~tpe~v~~al~~ 755 (759)
T PRK09970 694 PQ-LESAFVEIY-EPQSAYGHKSLGEPPIIS---PAPAIRNAVLMATG-------------VAINTLPMTPQRLFEEFKE 755 (759)
T ss_pred CC-eEEEEEecC-CCCCCCCCcccCCCcccc---hHHHHHHHHHHhhC-------------CCcCCCCCCHHHHHHHHHh
Confidence 95 999999874 678899999999999887 67799999999995 6779999999999998854
No 11
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=100.00 E-value=1e-147 Score=1414.85 Aligned_cols=705 Identities=22% Similarity=0.240 Sum_probs=620.1
Q ss_pred chhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCccccC--CCccc
Q 000629 612 GAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIF--GSEPL 689 (1383)
Q Consensus 612 d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~~~~--~~~p~ 689 (1383)
|+.++|||+++|++|+. +|||||++|||||++||+|++||+|+|++||||++|+|++|+| +.+....... .++|+
T Consensus 1 e~~r~vtG~a~Y~~Di~-~pgmL~a~~vrSp~aha~I~~ID~s~A~~~pGV~~V~t~~D~p--~~~~~~~~~~~~~~~~~ 77 (770)
T TIGR02416 1 EDIRFIQGKGNYVDDVK-LPGMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLK--PLNLHWMPTLAGDVQAV 77 (770)
T ss_pred CCcccccccccccccCC-CCCCEEEEEEcCCCccEEEecccHHHHhhCCCcEEEEEHHHcC--CccCCcCCCCCCCCccc
Confidence 57899999999999997 6899999999999999999999999999999999999999998 3332111111 23789
Q ss_pred ccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCC--ccc-CC------------cc-c
Q 000629 690 FADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEV-PS------------FL-Y 753 (1383)
Q Consensus 690 la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~--~~~-~~------------~~-~ 753 (1383)
|++++|||+|||||+|||+|+++|++|+++|+|+| |+| |+|+|++||++++++ |+. +. |. .
T Consensus 78 la~~~Vry~Ge~Va~VvA~t~~~A~~A~~~v~V~y--e~l-p~v~d~~~A~~~~a~~ih~~~~~~~~~~~~~~n~~~~~~ 154 (770)
T TIGR02416 78 LADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDY--EPL-PVVIDPFKALEPDAPVLREDLKGKTTGAHGARKHHNHIF 154 (770)
T ss_pred CcCCEEEEcCCcEEEEEECCHHHHHHHhccceeee--ecC-CccCCHHHHhcCCCceecCCCCCccccccccccccceee
Confidence 99999999999999999999999999999999999 889 999999999988774 321 11 11 1
Q ss_pred cC---CCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCCcEE
Q 000629 754 PK---PVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVR 829 (1383)
Q Consensus 754 ~~---~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~-~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVr 829 (1383)
.. ..||++++|++|+++ ||++|++++|+|+||||++|+|+||+ +|+|+||+|||+|+.+|..||++||||++|||
T Consensus 155 ~~~~gd~gd~~~af~~a~~v-ve~~~~~~~~~h~~mEp~~~iA~~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~Vr 233 (770)
T TIGR02416 155 RWEIGDKAATDAVFAKAEVV-VKQMMTYPRVHPSPLETCGCVASMDPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIR 233 (770)
T ss_pred EEecCCccchhHHhccCCEE-EEEEEEeCceeeEcCCCCeEEEEEeCCCCeEEEEECCCcHHHHHHHHHHHhCCCHHHEE
Confidence 12 445679999999996 99999999999999999999999985 67899999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCC
Q 000629 830 VITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAG 909 (1383)
Q Consensus 830 V~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~G 909 (1383)
|+.+++|||||+|... +....+||++|+++||||||+|||+|+|..+++|||+.+++|+|+|+||+|++++++++.|+|
T Consensus 234 V~~~~vGGgFG~K~~~-~~~~~~aa~~A~~~gRPVk~~~sR~E~~~~~~~r~~~~~~~k~g~d~dG~i~a~~~~~~~d~G 312 (770)
T TIGR02416 234 VISPDIGGGFGNKVGI-YPGYVCAIVASIVLGVPVKWVEDRMENLSTTSFARDYHMTGELAATKDGKILAMRCNVLADHG 312 (770)
T ss_pred EEcCCCCCCccccccc-ccHHHHHHHHHHHhCCCEEEecchHHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEEeecc
Confidence 9999999999999864 334355889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC-chhhhcc--ccCCCCcCCcEEEEEEEeecCCCCcC-ccC-CCChhHHHHHHHHHHHHHHHHcCCCHHHHHHh
Q 000629 910 LSPDVSP-IMPSNMI--GALKKYDWGALHFDIKVCRTNLPSRS-AMR-APGEVQGSFIAEAVIEHVASTLSMEVDFVRNI 984 (1383)
Q Consensus 910 ay~~~~~-~~~~~~~--~~~~~Y~ipn~~~~~~~v~TN~~~~g-a~R-G~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~ 984 (1383)
+|.+++. ++..... .+.++|+|||++++++.|+||++|.+ +|| |||.||++|++|++||++|++|||||+|||+|
T Consensus 313 ay~~~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~gta~Rgg~G~pq~~fa~E~~mD~~A~~lg~DP~e~R~~ 392 (770)
T TIGR02416 313 AFDACADPSKWPAGFFNICTGSYDIPVAHCAVDGVYTNKAPGGVAYRCSFRVTEAVYAIERAVDTLAQRLEMDSADLRIK 392 (770)
T ss_pred ccCCCccchhhhhhhhhhcCCccccceEEEEEEEEECCCCCCCCccccCCccHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 9987654 3232222 46799999999999999999999998 999 89999999999999999999999999999999
Q ss_pred hcCCCCCcccccccCCCccccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCC-cceeceecceEeeccCC--------
Q 000629 985 NLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLW-RKKGVCRLPIVHEVTLR-------- 1054 (1383)
Q Consensus 985 Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~-~~rGia~a~~~~g~~~~-------- 1054 (1383)
|++++++. ||.+++|+.+++ ++++||+++++.++|+++++.+.+.++++++ ..+|+|+++..+..+..
T Consensus 393 N~~~~~~~--p~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~G~a~~~~~~~~~~~~~~~~~ 470 (770)
T TIGR02416 393 NFIQPEQF--PYTAPLGWEYDSGDYPLAMKKAMDTVDYHQLRAEQAAKRKRGETRELMGIGISFFTEIVGAGPSKNCDIL 470 (770)
T ss_pred hCCCCccC--ccccCCCceecCCCHHHHHHHHHHhcCchhhHHHHHHHHhcCCCCceEEEEEEEEEEeccCCCccccccc
Confidence 99988643 688888988877 9999999999999999877655545444543 24566766555444332
Q ss_pred ----CcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccc
Q 000629 1055 ----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTS 1130 (1383)
Q Consensus 1055 ----~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t 1130 (1383)
.+.+.|+|++||+|+|.+|++|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|
T Consensus 471 ~~~~~~~a~v~l~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~~gt~~Sr~t 542 (770)
T TIGR02416 471 GVGMFDSCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGI--------PAEDIMVEEGDTDTAPYGLGTYGSRST 542 (770)
T ss_pred ccCccceEEEEECCCceEEEEECCCCCCCCchHHHHHHHHHHHCC--------CHHHEEEEecCCCCCCCCCCCchhHHH
Confidence 35699999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhcc--------C---------C-CcCHHHHHHHHhhc-----CceeEEEEeeccC
Q 000629 1131 EASCQVVRDCCNILVERLTLLRERLQGQ--------M---------G-NVEWETLIQQAHLQ-----SVNLSASSMYVPD 1187 (1383)
Q Consensus 1131 ~~~g~Av~~A~~~L~~rl~~~a~~l~~~--------~---------~-~~~~~~~~~~a~~~-----~~~l~a~~~~~~~ 1187 (1383)
+++|+||++||++||+||+++++++++. + + .++|.+++..++.. ..+|.+.++|.+.
T Consensus 543 ~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 622 (770)
T TIGR02416 543 PVAGAATALAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGDPSKFKTMADIAWAAYNSPPPGLEPGLEAVNYYDPP 622 (770)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEECCCCCCcccHHHHHHHHhccCccCcCCceEEEEEeCCC
Confidence 9999999999999999999998876432 1 1 27899999877642 1348888888653
Q ss_pred CCcccccceeEEEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCC
Q 000629 1188 FTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWT 1267 (1383)
Q Consensus 1188 ~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~d 1267 (1383)
. .+|+||+|++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||++|+++|+||+|
T Consensus 623 ~---~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d~~G~~l~~~~~d 699 (770)
T TIGR02416 623 N---MTYPFGAYFCVVDIDVDTGVAKVRRFYALDDCGTRINPMIIEGQIHGGLTEGFAVAMGQEIRFDEQGNVLGASLMD 699 (770)
T ss_pred C---CCCCceeEEEEEEEECCCCeEEEEEEEEEEECCCccCHHHHHHHHHhhHHHHHHHHHhCcceECCCCCCCCCChhh
Confidence 2 2578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCeeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCCh
Q 000629 1268 YKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATM 1347 (1383)
Q Consensus 1268 Y~iP~~~DiP~~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tp 1347 (1383)
|++|++.|+|+ +++.+++++ +|.+|+|+||+||+++++ +++||+|||+||+.+. | ++++++|+||
T Consensus 700 Y~iPta~DvP~-~~~~~~e~~-~~~~p~GaKGvGE~~~~~---~~aAianAI~dA~~~~-------G---v~~~~lP~Tp 764 (770)
T TIGR02416 700 YFLPTAVETPH-WETDHTVTP-SPHHPIGAKGVGESPHVG---SVPCFSNAVVDAYAFL-------G---VGHIDMPHTA 764 (770)
T ss_pred CcCCchhcCCC-eEEEEeecC-CCCCCCCccccCCccccc---HHHHHHHHHHHHHhhc-------C---CCcccCCCCH
Confidence 99999999996 999999875 678999999999999998 5569999999998544 4 7789999999
Q ss_pred HHHHH
Q 000629 1348 PVVKE 1352 (1383)
Q Consensus 1348 e~I~~ 1352 (1383)
|+||+
T Consensus 765 e~v~~ 769 (770)
T TIGR02416 765 WRVWK 769 (770)
T ss_pred HHHhh
Confidence 99985
No 12
>COG4631 XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.8e-147 Score=1247.12 Aligned_cols=726 Identities=34% Similarity=0.516 Sum_probs=674.0
Q ss_pred CCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCC
Q 000629 600 EYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIG 679 (1383)
Q Consensus 600 ~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~ 679 (1383)
-...||.+.++-.+..+|+|.|.|+|||+.|+|.||+++-.|+++||||+++|++++++.|||+.|+|++|+| |.|.
T Consensus 15 ~~~~v~~~~~HeSAhkHV~GtA~YiDD~pepag~LH~~~gls~~aHAri~~mDl~~v~a~PGVv~vlta~DvP--GenD- 91 (781)
T COG4631 15 IRGGVGTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAPGVVDVLTAADVP--GEND- 91 (781)
T ss_pred cCCcccccccccchhhcccceeEEecCCCCcccchhhhccccccchheeeecchHHhhcCCCeEEEEEecCCC--CCCC-
Confidence 3457999999999999999999999999999999999999999999999999999999999999999999999 8774
Q ss_pred ccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCCcccCCccccCCCCC
Q 000629 680 SKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGD 759 (1383)
Q Consensus 680 ~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd 759 (1383)
..+...|+|+|++++|.|+||||.+|+|+|+++|++|+.+.+||| |+| |+++|+.+|++.+.+.. ++ ...++||
T Consensus 92 isp~~hddpl~a~gkVef~GQ~vfaV~A~s~e~ARraA~~a~ieY--e~l-p~~~di~~a~a~~~~v~-~p--~~l~rGD 165 (781)
T COG4631 92 ISPVKHDDPLLADGKVEFHGQPVFAVIAESREAARRAARLAKIEY--EDL-PPVTDIDEAIAAGRLVT-PP--LTLKRGD 165 (781)
T ss_pred CCcccCCCccccCceEEEccceEEEEeehhHHHHHHHHHhhhccc--ccC-CccCCHHHHhhcccccC-Cc--hhhcccc
Confidence 223467999999999999999999999999999999999999999 999 99999999998885433 22 2579999
Q ss_pred hhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCC
Q 000629 760 ISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAF 839 (1383)
Q Consensus 760 ~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgF 839 (1383)
.+.+|+.|.+. ++++++++.|+|||||.+.++|.|+|||.++||+|||.|..+|..+|++||+|.|.|.|.+.|+||||
T Consensus 166 ~~a~~~~Ap~r-~~G~~~iGGQehFYLEgqia~a~p~Ed~~v~v~~STQhPtE~Q~~vahvLGvpsn~VtV~~rRMGGGF 244 (781)
T COG4631 166 AAAALAAAPHR-LQGEMRIGGQEHFYLEGQIALAVPGEDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGF 244 (781)
T ss_pred hhhhhhhCchh-heeeEEEcCeeeEEEeeeeeEeccCCCCCEEEEecCCCcHHHHHHHHHHhCCCcceEEEEEEeecCCc
Confidence 99999999996 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-ch
Q 000629 840 GGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IM 918 (1383)
Q Consensus 840 G~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~ 918 (1383)
|||++....+++.||++|+|++||||+..+|.|||.+++|||+++..|++|||.||+|+++++.+..++|...++|. ++
T Consensus 245 GGKEtQ~~~fAa~aA~aA~k~~r~vk~RpdRdeDm~~TGKRHdF~v~y~vGfDdeGri~~v~~~~aarcGfS~DLSgpV~ 324 (781)
T COG4631 245 GGKETQANQFAALAALAAKKTGRPVKIRPDRDEDMTATGKRHDFHVDYEVGFDDEGRILGVDATLAARCGFSADLSGPVT 324 (781)
T ss_pred CcccccchHHHHHHHHHHHHhCCceeecCCcchhhhhccCcCceEEEeeeccCCCCcEEEeeeehhhccCcccccCccch
Confidence 99999888999999999999999999999999999999999999999999999999999999999999999999887 88
Q ss_pred hhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccc
Q 000629 919 PSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYES 998 (1383)
Q Consensus 919 ~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~ 998 (1383)
+++++|+++.|.+|++++.++.++||+.++++|||||.||+++++|++||++|..||.||+|+|++|++.++... -+
T Consensus 325 dRAlfH~DNaYf~p~v~~~s~~~kTntvSnTAfRGFGGPQGm~~~Eriid~vA~alGkdpleiRk~NfYg~~~~n---~T 401 (781)
T COG4631 325 DRALFHADNAYFYPHVHILSRPLKTNTVSNTAFRGFGGPQGMLGIERIIDEVAYALGKDPLEIRKLNFYGKDGRN---VT 401 (781)
T ss_pred hhheeccccceeccceeeecceeeccccccccccccCCcchhhHHHHHHHHHHHHhCCCHHHHHhhhccCCCCCc---cC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999865421 12
Q ss_pred CCCccc-cCCHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccCC-----CcceEEEEcCCCcEEEEe
Q 000629 999 SAGEYA-EYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEV 1072 (1383)
Q Consensus 999 ~~g~~~-~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~-----~~~a~v~l~~DGsv~v~~ 1072 (1383)
|.++.. +..+.++|+++...++|..|++++.+||+..+..||||++.|.+||++|. +.+++|.|+.||||.++|
T Consensus 402 pYhQ~Vednii~ri~~ELeaSsdyaaRr~~i~aFNa~spv~krGlAlTPVKFGISFt~t~~NQAGALVHvY~DGSi~lNH 481 (781)
T COG4631 402 PYHQTVEDNIIARIVDELEASSDYAARREAIRAFNAASPVIKRGLALTPVKFGISFTATHYNQAGALVHVYTDGSIHLNH 481 (781)
T ss_pred ccccchHHhHHHHHHHHHHhcchHHHHHHHHHHhhccChhhhccccccceeeeEEEeeeeeccCceEEEEeccCeEEEcC
Confidence 334443 34788999999999999999999999999999999999999999999975 589999999999999999
Q ss_pred CCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHH
Q 000629 1073 GGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLR 1152 (1383)
Q Consensus 1073 g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a 1152 (1383)
|++|||||++||++|++|++|+| ++++|+|..++|+.+||++.|++|.+++++|.|+++||+++|+||..++
T Consensus 482 GGTEMGQGL~tKvaQVvA~~fqv--------d~~rVkitaT~T~KVpNTSaTAASSGsDLNGmAa~dAa~qIk~RLv~fA 553 (781)
T COG4631 482 GGTEMGQGLYTKVAQVVAEEFQV--------DIDRVKITATTTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFA 553 (781)
T ss_pred CCcccccchhHHHHHHHHHHhCc--------ccceEEEeccccCCCCCCccccccccCCcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHhccC---------------CCcCHHHHHHHHhhcCceeEEEEeecc----------CCCcccccceeEEEEEEEEEC
Q 000629 1153 ERLQGQM---------------GNVEWETLIQQAHLQSVNLSASSMYVP----------DFTSVQYLNYGAAVSEVEVNL 1207 (1383)
Q Consensus 1153 ~~l~~~~---------------~~~~~~~~~~~a~~~~~~l~a~~~~~~----------~~~~~~~~~~ga~~aEVEVD~ 1207 (1383)
++-+... ..++|++++++||..++.|++.++|.. .+.||.||+|||.++||+||+
T Consensus 554 A~~~~V~~~~v~F~~n~vrig~~~~~F~~lv~~AY~arvqLsaaGFY~TPkihwdra~~~G~PFyYFaYGAacSEV~vDt 633 (781)
T COG4631 554 AEHWGVPEEDVAFLPNRVRIGGQELAFADLVKQAYFARVQLSAAGFYKTPKIHWDRAAGRGRPFYYFAYGAACSEVSVDT 633 (781)
T ss_pred HHhcCCCHHHeEecCCeeEEcceecCHHHHHHHHhheeeeeeccccccCCccccchhhcCCCceEEEeecceeeeEEEec
Confidence 8755421 247999999999999999999999964 367899999999999999999
Q ss_pred CCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecC
Q 000629 1208 LTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNS 1287 (1383)
Q Consensus 1208 ~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~ 1287 (1383)
+||+.+++|.++.||+|++|||.++.|||||||+||+||.++||+.||++|++.|....+||||.++|+|+.|+|.+.+.
T Consensus 634 lTGey~~~R~DiLHDvG~SLNpaiDlGQiEGgFvQGmGWLTtEeL~wd~kGRlrThapSTYKiP~~sdrP~~f~V~L~~~ 713 (781)
T COG4631 634 LTGEYKVERTDILHDVGRSLNPAIDLGQIEGGFVQGMGWLTTEELWWDEKGRLRTHAPSTYKIPLASDRPKIFNVRLAEW 713 (781)
T ss_pred ccceEEEEeehhhhhhhhhcccccccccccchhcccccccchhhheeccCCCeeecCCccccCcccccCchheeeehhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCC-CCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcCC
Q 000629 1288 GHH-KKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCGL 1356 (1383)
Q Consensus 1288 ~~~-p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~~ 1356 (1383)
+.+ ...+++||.+||||++++.+|..||.+|+..- ++. + .-...+.|+|||+|++++..
T Consensus 714 ~~n~e~ti~rSKAVGEPPlmL~iSV~~Al~~AvAsv-aD~-------r--~~p~ldaPATpErVlmave~ 773 (781)
T COG4631 714 SENAEPTIHRSKAVGEPPLMLGISVLEALSDAVASV-ADY-------R--VCPRLDAPATPERVLMAVER 773 (781)
T ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHHh-ccc-------C--cCCCCCCCCCHHHHHHHHHH
Confidence 433 34579999999999999999999999998643 221 1 13347999999999998854
No 13
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=100.00 E-value=2.6e-145 Score=1388.46 Aligned_cols=702 Identities=23% Similarity=0.308 Sum_probs=613.8
Q ss_pred CCCCccc-ccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCC-CCc
Q 000629 603 PVGEPIT-KSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQN-IGS 680 (1383)
Q Consensus 603 ~vG~~~~-r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~-~~~ 680 (1383)
+|||+++ |+|++.||||+++|++|++ +|||||++++|||++||+|++||+|+|+++|||++|+|++|+| +.+ ++.
T Consensus 2 ~iG~~~~~R~d~~~kvtG~a~Y~~Di~-~pgmL~a~~vrSp~aha~I~siD~s~A~a~pGV~~V~t~~D~p--~~~~~g~ 78 (768)
T TIGR03196 2 GIGKPSRVRPDGPDKVTGEFKYMGDLR-FPGMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQAMVTAADVP--GLARFGI 78 (768)
T ss_pred cCCCcCCcCcchHhhCcccccccccCC-CCCcEEEEEEecCCCcEEEeeccHHHHHhCCCcEEEEehHHCC--CCCCCCc
Confidence 5899999 9999999999999999997 6899999999999999999999999999999999999999998 333 222
Q ss_pred cccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCC--cccCCccc---cC
Q 000629 681 KTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEVPSFLY---PK 755 (1383)
Q Consensus 681 ~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~--~~~~~~~~---~~ 755 (1383)
...++|+|++++|||+|||||+|||+|+++|++|+++|+|+| |+| |+++|+++|+++++. |+ +.|+. ..
T Consensus 79 --~~~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~d~~~a~~~~a~~i~~-~~ni~~~~~~ 152 (768)
T TIGR03196 79 --IIADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDY--EEL-APMDDPDKALQPDAEPLHE-AGNILHEAEF 152 (768)
T ss_pred --cCCCcccccCCEEEEcCCeEEEEEECCHHHHHHHhccCceEE--EeC-CCcCCHHHHhcCCCCeECC-CCcCcceeee
Confidence 235889999999999999999999999999999999999999 889 889999999987763 33 34543 36
Q ss_pred CCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccC
Q 000629 756 PVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRV 835 (1383)
Q Consensus 756 ~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~v 835 (1383)
..||++++|++|+++ ||++|++++|+|+||||++|+|+|+++|+|+||+|||+|+.+|..||++||||++||||+++++
T Consensus 153 ~~Gd~~~af~~a~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~v 231 (768)
T TIGR03196 153 RHGDPDEGFAAGDTV-FEDQYELGMQDHAFLAPEAALAMPAADGGFDLRAATQHGHKDREQIAACFDIPEEKIRITLAGM 231 (768)
T ss_pred ccCCHhHHhccCCEE-EEEEEEeCCeeeeecCCceEEEEEcCCCCEEEEECCCchHHHHHHHHHHhCCCHHHEEEEeCCC
Confidence 789999999999996 9999999999999999999999999777899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCC
Q 000629 836 GGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVS 915 (1383)
Q Consensus 836 GGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~ 915 (1383)
|||||+|.... .++.||++|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|++++++++.|+|+|.+++
T Consensus 232 GGgFG~K~~~~--~~~~aa~~A~~~gRPVk~~~sReE~~~~~~~r~~~~~~~k~g~~~dG~i~a~~~~~~~d~Gay~~~~ 309 (768)
T TIGR03196 232 GGAFGGKDDLN--IQIHAALLALASGLPVKIAQDRKESFLGGIHRHPAKITFKHGADADGNLLAHDAKIVADGGAYASLG 309 (768)
T ss_pred CCccCCccccc--HHHHHHHHHHHhCCCEEEEechHHhhhcCCCCCCeEEEEEEEECCCCcEEEEEEEEEecccccCCcc
Confidence 99999998643 3567899999999999999999999999999999999999999999999999999999999998876
Q ss_pred C-chhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccc
Q 000629 916 P-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNL 994 (1383)
Q Consensus 916 ~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~ 994 (1383)
. +.......+.++|++||++++++.|+||++|+|+|||||.||+.|++|++||++|++|||||+|||+||++++++..
T Consensus 310 ~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~- 388 (768)
T TIGR03196 310 PAVLAFAVEHAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGGNQITFAHEAHLDRLADALGIDPLDLRRKNARKPGDLG- 388 (768)
T ss_pred HHHHHHHHHhcCCCcccceEEEEEEEEEcCCCCCCccCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcC-
Confidence 5 33444456689999999999999999999999999999999999999999999999999999999999999887542
Q ss_pred ccccCCCccccCCHHHHHHHHHhhcCch-----hHHHHHHHHh------hcCCCcceeceecceEeeccCC-----C--c
Q 000629 995 FYESSAGEYAEYTLPLIWDKLAVSSSFN-----QRTEMIKEFN------RSNLWRKKGVCRLPIVHEVTLR-----S--T 1056 (1383)
Q Consensus 995 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~r~~~~~~~~------~~~~~~~rGia~a~~~~g~~~~-----~--~ 1056 (1383)
|++.+.+. .+++++||++++++++|+ ++......++ +++.+++||+|+++..++.+.+ + +
T Consensus 389 ~~g~~~~~--~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~~~rGiG~a~~~~~~~~~~~~~~~~~~ 466 (768)
T TIGR03196 389 PLEHRIAA--PDGAAEVIEAIASRPLPKAPILKKANRAVTALPGGRPAAAECGRLQRGTGAAIAMHGGGFGEGMDDAAVA 466 (768)
T ss_pred CCCcccCC--cCCHHHHHHHHHhhccccchhhhhhhhhhhhhhhhhhhhhhcCCeeEEEEEEEEEecccCCCCccccCCc
Confidence 34333221 237999999999999998 3222111111 1223356788888887776543 2 3
Q ss_pred ceEEEEcCCCc--EEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchH
Q 000629 1057 PGKVSILSDGS--VVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASC 1134 (1383)
Q Consensus 1057 ~a~v~l~~DGs--v~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g 1134 (1383)
.+.|+|++||+ |+|.+|++|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|+++|
T Consensus 467 ~a~v~l~~dGsv~v~v~~g~~d~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G 538 (768)
T TIGR03196 467 GARLELAEDGTVKIRAHFACAECGQGFLAAAEQIAMEELGC--------AAEDISIAIADTAKGPKAGSSSASRGTSMSG 538 (768)
T ss_pred cEEEEEeCCCCeEEEEEECCCCcCCCHHHHHHHHHHHHhCC--------CHHHEEEecCCCCCCCCCCCCchhhhhHhHH
Confidence 78999999996 8899999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--------CC------------------CcCHHHHHHHHhhcCceeEEEEee-cc-
Q 000629 1135 QVVRDCCNILVERLTLLRERLQGQ--------MG------------------NVEWETLIQQAHLQSVNLSASSMY-VP- 1186 (1383)
Q Consensus 1135 ~Av~~A~~~L~~rl~~~a~~l~~~--------~~------------------~~~~~~~~~~a~~~~~~l~a~~~~-~~- 1186 (1383)
+||++||++||+||+++++++++. ++ .++|.+++.. ..+.+.+.| ..
T Consensus 539 ~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 613 (768)
T TIGR03196 539 GAIQGACAAFAAQLKARAAETAGLPAEVVEAPAENLIPGAAEIVGDKNEAALRVPLAEAAAD-----GPIAAETAFHDFP 613 (768)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhhEEEeCCeeeecccceeeecCCCcceEEHHHHhcc-----ccceeeeccccCC
Confidence 999999999999999997765431 11 2457766521 123333333 11
Q ss_pred C---------CCcccccceeEEEEEEEEECCCCcEEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCC
Q 000629 1187 D---------FTSVQYLNYGAAVSEVEVNLLTGETTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSD 1257 (1383)
Q Consensus 1187 ~---------~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~ 1257 (1383)
. +.++.+|+||+|++|||||++||+++|+|+++++|||++|||.+++||||||++||||+||+|++.|| +
T Consensus 614 ~~~~~~~~~~~~~~~~~~~ga~~~eveVd~~tG~v~v~~~~~~~D~G~~iNp~~~~gQi~Gg~~~Gig~al~E~~~~~-~ 692 (768)
T TIGR03196 614 TSALDADVGQGDGHFAFAAAAAAAEVDVDLDLGDVKLIDCAHAIAAGPVLNPLALRGQIEGGAAMALGLALMEEAKMT-D 692 (768)
T ss_pred CcccccccccCCCcccccceEEEEEEEEECCCCcEEEEEEEEEEECCCccCHHHHHHHHHHHHHHHHHHHHhCCeEec-C
Confidence 0 11234678999999999999999999999999999999999999999999999999999999999996 7
Q ss_pred CcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCc
Q 000629 1258 GLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDF 1337 (1383)
Q Consensus 1258 G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~GaKgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~ 1337 (1383)
|+++|+||+||++|++.|+|+ ++++++++ ++|.+|||+||+||+++++ +++||+|||++|++
T Consensus 693 G~~~~~~~~~Y~~p~~~d~P~-~~~~~~~~-~~~~~p~G~kG~GE~~~~~---~~~AianAi~~A~G------------- 754 (768)
T TIGR03196 693 GRVAAENFDDYLIPGIADVPD-LDFIAIED-LMKDAPYGPKGVGEAGTCA---ATPAIIAAIHDAVG------------- 754 (768)
T ss_pred CeECCCCcccccCCChhhCCC-eEEEEEeC-CCCCCCCCCccCcCccccc---hHHHHHHHHHHHhC-------------
Confidence 999999999999999999995 99999986 4678999999999999998 66699999999995
Q ss_pred eeecCCCCChHHHH
Q 000629 1338 TVNLEVPATMPVVK 1351 (1383)
Q Consensus 1338 ~~~~~~P~Tpe~I~ 1351 (1383)
++++++|+|||+|+
T Consensus 755 ~r~~~lP~tpe~v~ 768 (768)
T TIGR03196 755 CDINKLPIRPEDLL 768 (768)
T ss_pred cCcccCCCChhhCC
Confidence 67889999999984
No 14
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=100.00 E-value=4.3e-118 Score=1133.08 Aligned_cols=703 Identities=26% Similarity=0.362 Sum_probs=618.3
Q ss_pred CCCCCcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCcc
Q 000629 602 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK 681 (1383)
Q Consensus 602 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~~ 681 (1383)
..+|+++.|.|+..||||+++|++|+. .+||+|++|||||++|++|++||+++|+++|||++|+|++|+|. ..+. ..
T Consensus 4 ~~~gr~~~R~~~~~~vtG~~~y~~d~~-~~~~~~~~~vrs~~a~a~i~~id~~ea~~~~gv~av~ta~~l~~-~~~~-~~ 80 (731)
T COG1529 4 EIIGRSVLRADGLGKVTGKGRYADDIV-APGMLYAAFVRSPYAHARIVSIDVSEAQGLPGVLAVITAEELPA-WSPV-RV 80 (731)
T ss_pred ccCCCCcccccchhheeeeeheehhhc-CCCCceEEEEeccCCceEEEEechHHHhhCCCeEEEechhhCcc-cccc-cc
Confidence 579999999999999999999999997 67999999999999999999999999999999999999999983 0110 00
Q ss_pred ccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhcCCCcccCC-cc-ccCCCCC
Q 000629 682 TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPS-FL-YPKPVGD 759 (1383)
Q Consensus 682 ~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~~a~~~~~~-~~-~~~~~Gd 759 (1383)
...+..++|+.++|+|+|||||+|+|+|+++|++|+++|+|+| |+| |+++++++|+.++++..++. |+ .....||
T Consensus 81 ~~~p~~~~l~~~~v~~~G~~vA~vva~d~~~A~~aa~~v~V~y--e~l-~~~v~~~~a~~~~~~~ih~~~n~~~~~~~g~ 157 (731)
T COG1529 81 ELAPADEVLARGKVRYTGEPVAAVVAEDEYQARAAAELVLVEY--EAL-PPVVDPEEALAEDAPVIHDELNIARDATFGD 157 (731)
T ss_pred ccCCcchhhccCceEEeCCeEEEEEeCCHHHHHHHHhhceeee--ccC-CCcCCHHHHhcCCCccccccccccccccccc
Confidence 0111222789999999999999999999999999999999999 999 99999999999976422122 33 3466778
Q ss_pred hhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEeccCCCCC
Q 000629 760 ISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAF 839 (1383)
Q Consensus 760 ~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgF 839 (1383)
.| +|++|+++ ++.+|.++++.|.+|||++++++|+++++||+|++||+|+.+|..++++|++|+++|||+++++||||
T Consensus 158 ~~-a~a~A~~~-v~~~~~~~~~~~~~~E~~g~~a~~~d~~~lt~~~~tQ~~~~~~~~l~~~l~~p~~~vrvi~~dvGggf 235 (731)
T COG1529 158 DD-AFAAAAVV-VEAPYKTPRKDPNPMEPHGVVAVPDDGDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISPDVGGGF 235 (731)
T ss_pred ch-hhhcCcEE-eeeeeeccCcCccCcccccceeeEcCCCeEEEEEccCCchHHHHHHHHHhCCCHHHeEEecCCCCccc
Confidence 88 99999996 99999999999999999999999993238999999999999999999999999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCCCCC-ch
Q 000629 840 GGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IM 918 (1383)
Q Consensus 840 G~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~~~~-~~ 918 (1383)
|+|.. .+.....++++|+++||||||+++|+|.|..+.+||+...++++++++||+|++++.+++.|.|+|. +. +.
T Consensus 236 G~K~~-~~~~~~~~~~aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~--~~~~~ 312 (731)
T COG1529 236 GSKGV-VYVEEILAALAAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYN--GPTVP 312 (731)
T ss_pred CCccc-ceeHHHHHHHHHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCcc--ccchh
Confidence 99986 5666777779999999999999999999999999999999999999999999999999999999997 33 33
Q ss_pred hhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCccccccc
Q 000629 919 PSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYES 998 (1383)
Q Consensus 919 ~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~ 998 (1383)
......+.++|.|+|+++..+.++||++|+++|||+|.++++|++|++||+||++|||||+|||++|++..+.+.
T Consensus 313 ~~~~~~~~g~Y~i~~~~~~~~~v~tn~~p~~~~Rg~g~~~~~~a~E~~~d~lA~~Lgidp~eiR~~n~~~~g~~~----- 387 (731)
T COG1529 313 AAAAGLARGPYKIEAVYIEPYLVHTNMPPNGAYRGAGRPEGTFALERAVDELAEELGIDPVEIRLRNLIRGGPFG----- 387 (731)
T ss_pred HHHHHhcCCceecccceeeeEEEEcCCCCCcccccCCCchhHHHHHHHHHHHHHHhCCCHHHHhhhhccccCCCC-----
Confidence 344556789999999999999999999999999999999999999999999999999999999999999977542
Q ss_pred CCCccccC-CHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccCCC-cceEEEEcCCCcEEEEeCCcc
Q 000629 999 SAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRS-TPGKVSILSDGSVVVEVGGIE 1076 (1383)
Q Consensus 999 ~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~~-~~a~v~l~~DGsv~v~~g~~e 1076 (1383)
++..+++ ++.+|+++++++.+|.++.....+.+..+ ..+|+++++..+.+...+ +.+.|+++.||+++|.+|.++
T Consensus 388 -~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~--~~~G~g~a~~~~~~~~~~~~~a~v~~~~~g~v~v~~g~~~ 464 (731)
T COG1529 388 -LGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTREGD--LRRGVGRAMYTEPSGAGPGEGARVRLEADGTVTVRTGATD 464 (731)
T ss_pred -CcccccCccHHHHHHHHHHhcCcccccCChhhhhcCC--eeeeeEEEEEEEeccCCCCCcEEEEEcCCCcEEEEECCcc
Confidence 3455555 99999999999999987654443333322 356777777888888776 779999999999999999999
Q ss_pred CCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHHHHHHHHHHHHh
Q 000629 1077 MGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQ 1156 (1383)
Q Consensus 1077 ~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~~rl~~~a~~l~ 1156 (1383)
+|||++|+++|++|+.||| |+++|+|+.+||+..+.+++|+|||++.+++.|++.||++|++|+...++.++
T Consensus 465 ~G~G~~t~~~q~~ae~lgi--------p~~~V~v~~gDt~~~~~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~aa~~l 536 (731)
T COG1529 465 IGQGTDTVLAQIAAEELGI--------PPDDVEVVHGDTDVPVGGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAARML 536 (731)
T ss_pred CCCcHHHHHHHHHHHHhCC--------CHHHEEEEecCCCCCCCCCCCcCcccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999 99999999999999999999999999999999999999999999988877665
Q ss_pred ccC--------C-----------CcCHHHHHHHHhhcCceeEEEEeeccCCCcccccceeEEEEEEEEECCCCcEEEEEE
Q 000629 1157 GQM--------G-----------NVEWETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLLTGETTIVRS 1217 (1383)
Q Consensus 1157 ~~~--------~-----------~~~~~~~~~~a~~~~~~l~a~~~~~~~~~~~~~~~~ga~~aEVEVD~~TG~v~V~r~ 1217 (1383)
+.+ + .++|.+.+..+. ...+.....|.... .|+|+||++|||||++||++||+|+
T Consensus 537 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~~~~~~~~~----~~~~~A~~~EV~Vd~~tG~vrV~r~ 610 (731)
T COG1529 537 GADAEDVVLEDGAFKVGGGDRRSAVSLKEVAGKGL--APGLAVAASFGSDN----TYPYGAHIAEVEVDPETGEVRVLRV 610 (731)
T ss_pred CCChhHeeeccCeeeeccCCccceeeHHHhhhccc--cCcccccccccccc----cccceeEEEEEEEECCCCcEEEEEE
Confidence 211 1 045666654431 12333344443322 5789999999999999999999999
Q ss_pred EEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCCCeeEEEEecCCCCCCCCCCC
Q 000629 1218 DIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIPKKFNVEILNSGHHKKRVLSS 1297 (1383)
Q Consensus 1218 ~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~gp~Ga 1297 (1383)
++++|||++|||++++|||+||++||||++|+|+.+||++|+++|.||.||.||++.|+|+ +++++++++ +|.+|+|+
T Consensus 611 ~~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d~~g~~~~~n~~dY~ip~~~d~P~-iev~~v~~p-~~~~p~g~ 688 (731)
T COG1529 611 VAVDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDEDGQLLNSNLADYGIPRAADAPE-VEVEFVESP-SPFGPLGA 688 (731)
T ss_pred EEEEecCCccCHHHHHHHHHhHHHHHHHHHhhccceECCCCCcCCCCcccccCCCcccCCc-eEEEEecCC-CCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999997 999999998 88899999
Q ss_pred CccCCCCccchhhHHHHHHHHHHHHHHhhhcccccCCCCceeecCCCCChHHHHHhcC
Q 000629 1298 KASGEPPLLLAVSVHCATRAAIREARKQLLSWSQLNGSDFTVNLEVPATMPVVKELCG 1355 (1383)
Q Consensus 1298 KgvGE~~~~~~~av~~AI~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~Tpe~I~~al~ 1355 (1383)
||+||+++++ +++||+|||.+|++ .+++++|+|||+||.++.
T Consensus 689 kGvGE~g~~~---~~pAvaNAV~~AtG-------------kri~~lP~tp~~i~~al~ 730 (731)
T COG1529 689 KGVGEGGIIG---IAPAIANAVFDATG-------------KRIRDLPITPERILAALR 730 (731)
T ss_pred CCcCcCccCc---hhHHHHHHHHHHhC-------------CccccCCCCHHHHHHhhh
Confidence 9999999998 66699999999996 678899999999999875
No 15
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.2e-110 Score=916.73 Aligned_cols=469 Identities=29% Similarity=0.522 Sum_probs=415.9
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCC
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1383)
Q Consensus 11 ~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 90 (1383)
.++|+|.+||+.+.+++++|+.|||||||.+.+|||||+||.||+||||||||++..+. +.+.+++||+|+.++.++||
T Consensus 6 ~~~irf~lN~~~~~l~~v~P~~TlLd~LR~d~~ltGtKEGCAEGDCGACTVlVgrl~~g-~~l~yeSVNACirfl~sL~G 84 (493)
T COG4630 6 RNTIRFLLNGETRVLSDVPPTTTLLDYLRLDRRLTGTKEGCAEGDCGACTVLVGRLVDG-GSLRYESVNACIRFLGSLDG 84 (493)
T ss_pred cceeEEEecCceEEeecCCcchHHHHHHHHhcccccccccccCCCcCceEEEEEeecCC-CceeeeehhHHHHHHhhcCC
Confidence 47899999999999999999999999999999999999999999999999999998654 23899999999999999999
Q ss_pred ceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 000629 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (1383)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRC 170 (1383)
++|+|||+|+.+++.||||||+|+++|||||||||||||||||+|+.+ ++.| +.+.|+++|+||||||
T Consensus 85 ~hvvTvE~L~~~~g~LHpVQqamvd~hGSQCGfCTPGFVmSLyal~~~-----~~~P-------~~a~i~kALqGNLCRC 152 (493)
T COG4630 85 THVVTVEHLRGQDGTLHPVQQAMVDFHGSQCGFCTPGFVMSLYALWMN-----SPTP-------SRAAIEKALQGNLCRC 152 (493)
T ss_pred ceEEEehhhcCCCCCcCHHHHHHHhccCCccCCcCchHHHHHHHHHhc-----CCCC-------chhHHHHHhhCCcccc
Confidence 999999999987777999999999999999999999999999999954 3555 4899999999999999
Q ss_pred CCChhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCccccc-ccCCceeecC-CceEEecCC
Q 000629 171 TGYRPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKK-ENSSAMLLDV-KGSWHSPIS 248 (1383)
Q Consensus 171 tgy~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~~~~~~~~~-~~~~~~P~s 248 (1383)
|||+||++|.+.++.-... ..|.|..-.... +. +.|.- .....+.+.+ ...++.|.+
T Consensus 153 TGY~pI~~AA~~~~a~~~~-------------------a~fDPl~~~R~~-~~-~~L~A~~~~e~v~~~~~~~r~~~P~~ 211 (493)
T COG4630 153 TGYRPIIRAAEAIAALGPA-------------------AGFDPLAARRTA-IT-ARLRALRDTETVEVGSGDDRFIVPAT 211 (493)
T ss_pred cCchHHHHHHHHHhccCCc-------------------ccCChhhhhHHH-HH-HHHhhccCCcEEEecCCCceeEeecc
Confidence 9999999999976532100 001110000000 00 00000 0112344445 778999999
Q ss_pred HHHHHHHHhhhcCCCCCceeEEccCccceEe--eecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHh
Q 000629 249 VQELRNVLESVEGSNQISSKLVAGNTGMGYY--KEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEET 326 (1383)
Q Consensus 249 l~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~--k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~ 326 (1383)
++++..+++ .+|+++||||+||+++| |.......+|.+++|+||+.|++..++|+|||++|+++....|...
T Consensus 212 l~D~a~l~a-----a~P~AtivAGsTDvgLwVtk~mr~l~~vi~v~~l~eL~~i~~~~~~l~iGAgvt~t~a~~~la~~- 285 (493)
T COG4630 212 LADFADLLA-----AHPGATIVAGSTDVGLWVTKQMRDLNPVIFVGHLAELRRIEVSTGGLEIGAGVTYTQAYRALAGR- 285 (493)
T ss_pred HHHHHHHHh-----hCCCCEEEecCcchhhHHHHHHhhcCCeEEecchhhhheeeecCCcEEEccCccHHHHHHHHHhh-
Confidence 999999999 58999999999999995 4446788899999999999999999999999999999999998776
Q ss_pred hhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhcc---
Q 000629 327 KEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE--- 403 (1383)
Q Consensus 327 ~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~--- 403 (1383)
+|.|.+.+.+|+|.||||+|||||||+|+||+ .|.+|+|+||||+|++.+.++.|++||+|||.
T Consensus 286 ----------~P~l~~L~~r~gg~qvRN~gTlGGNIangSPI---GDtPPaLIALgA~ltLr~g~~~RtlPLe~~Fi~Y~ 352 (493)
T COG4630 286 ----------YPALGELWDRFGGEQVRNMGTLGGNIANGSPI---GDTPPALIALGATLTLRSGDGRRTLPLEDYFIAYG 352 (493)
T ss_pred ----------CchHHHHHHHhcchhhhccccccccccCCCcC---CCCCchhhhcCcEEEEEecCCcccccHHHHHHHhh
Confidence 99999999999999999999999999999999 79999999999999999999999999999996
Q ss_pred CCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEccc
Q 000629 404 RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAF 483 (1383)
Q Consensus 404 ~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv 483 (1383)
+++++|||+|.+++||.+.+ ...|..||++|| +++|||.|.+||.++++ +++|.++||+||||
T Consensus 353 kqdr~pGEfVe~v~vP~~~~----------~~rfa~yKisKR-rdeDISAv~~Af~l~Ld------g~~V~~arIa~GGm 415 (493)
T COG4630 353 KQDRQPGEFVEAVRVPLPAP----------SERFAAYKISKR-RDEDISAVCGAFALDLD------GGRVADARIAFGGM 415 (493)
T ss_pred hhccCcchhhhheecCCCCc----------chhhhhhhhhhh-ccchHHHHHhHheeeec------CCeeeeeeeecCcc
Confidence 78999999999999999876 678999999999 79999999999999998 56999999999999
Q ss_pred CCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhhhhc
Q 000629 484 GTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1383)
Q Consensus 484 ~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~~~~ 550 (1383)
+.+ |.|+.++|++|.||+|++++++.|++.+..++.|.+|+ +|+|||+.+|+||++|||++.....
T Consensus 416 AaT-PkRA~~~EaAL~Gk~wteatve~A~aAl~~D~tPltD~RAsaeYR~l~a~nlL~RfflEt~~~~ 482 (493)
T COG4630 416 AAT-PKRASEVEAALLGKPWTEATVEAAAAALAGDFTPLTDMRASAEYRALTAKNLLRRFFLETQGEA 482 (493)
T ss_pred ccC-ccchHHHHHHHcCCCccHHHHHHHHHHHhcCCCcccchhhhHHHHHHHHHHHHHHHhhhccCCc
Confidence 999 99999999999999999999999999999999999997 8999999999999999999987754
No 16
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and
Probab=100.00 E-value=3.9e-106 Score=973.07 Aligned_cols=458 Identities=30% Similarity=0.525 Sum_probs=410.5
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCcee
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLI 93 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 93 (1383)
|+|+|||+++++++++|+++|++|||+++||||||.||++|+||||||+|+++|+.+ ++.+++||||++|+++++|++|
T Consensus 1 i~~~~Ng~~~~~~~~~~~~~ll~~lR~~~~l~g~k~gC~~G~CGaCtv~~~~~~~~~-~~~~~~v~sCl~~~~~~~g~~i 79 (467)
T TIGR02963 1 IRFFLNGETVTLSDVDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVGELVDGG-KLRYRSVNACIQFLPSLDGKAV 79 (467)
T ss_pred CEEEECCEEEEeecCCCCCCHHHHHHHhcCCCCCCcccCCCCCCceEEEEEecCCCC-cccceEEehhhhhHHhcCCCEE
Confidence 579999999999658999999999999999999999999999999999999998655 8889999999999999999999
Q ss_pred EEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCC
Q 000629 94 TTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGY 173 (1383)
Q Consensus 94 ~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy 173 (1383)
+|||||+++++.+||||++|+++|++|||||||||||++++||++ ||+|+ ++||+++|+|||||||||
T Consensus 80 ~TvEgl~~~~~~l~~~q~a~~~~~~~QCG~CtpG~vm~~~~ll~~-----~~~~~-------~~~i~~~l~gnlCRCtgy 147 (467)
T TIGR02963 80 VTVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKN-----SPAPS-------RADIEDALQGNLCRCTGY 147 (467)
T ss_pred EecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHhc-----CCCCC-------HHHHHHHhcCCcccCCCC
Confidence 999999864568999999999999999999999999999999953 56664 999999999999999999
Q ss_pred hhHHHHHHHhhhcccccccccccccccCCcccccccCCCCCCCCCcccCCCcccccc-cCCceeecC-CceEEecCCHHH
Q 000629 174 RPIADACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKE-NSSAMLLDV-KGSWHSPISVQE 251 (1383)
Q Consensus 174 ~~i~~a~~~~a~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-~~~~~~~~~-~~~~~~P~sl~e 251 (1383)
++|++|++. +.+.. | +++|++.++. +|| ++... ....+.+.+ +.+||+|+|++|
T Consensus 148 ~~i~~a~~~-~~~~~--------~-------------~~~~~~~~~~-~~~-~l~~~~~~~~~~~~~~~~~~~~P~sl~E 203 (467)
T TIGR02963 148 RPILDAAEA-AFDYP--------C-------------SDPLDADRAP-IIE-RLRALRAGETVELNFGGERFIAPTTLDD 203 (467)
T ss_pred HHHHHHHHH-HHhCC--------C-------------CCcCCcchhh-hhh-HHHhcCCCcceeecCCCceEECCCCHHH
Confidence 999999954 33210 1 2445555432 453 34322 233455555 789999999999
Q ss_pred HHHHHhhhcCCCCCceeEEccCccceE-eee-cccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhhh
Q 000629 252 LRNVLESVEGSNQISSKLVAGNTGMGY-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEF 329 (1383)
Q Consensus 252 ~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~~ 329 (1383)
++++|+ ++++++++|||||+++ ++. ...++.+|||++|+||+.|+.++++|+|||+|||+++++.+++.
T Consensus 204 a~~ll~-----~~~~a~lvAGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vT~~el~~~l~~~---- 274 (467)
T TIGR02963 204 LAALKA-----AHPDARIVAGSTDVGLWVTKQMRDLPDVIYVGQVAELKRIEETDDGIEIGAAVTLTDAYAALAKR---- 274 (467)
T ss_pred HHHHHh-----hCCCCEEEecCcchHHHHhcCCCCCCeEEECCCChhhccEEEcCCEEEEecCCcHHHHHHHHHHH----
Confidence 999999 4689999999999988 333 25789999999999999999999999999999999999877765
Q ss_pred chhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhcc---CCC
Q 000629 330 HSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE---RPP 406 (1383)
Q Consensus 330 ~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~---~~~ 406 (1383)
+|.|.+++++|||+||||+|||||||++++|+ ||++|+|+||||+|+|.+.+|+|+||++|||. ++.
T Consensus 275 -------~p~L~~a~~~ias~qIRN~aTiGGNI~~asP~---sD~~p~LlALdA~v~l~~~~G~R~vpl~dF~~g~~kt~ 344 (467)
T TIGR02963 275 -------YPELGELLRRFASLQIRNAGTLGGNIANGSPI---GDSPPALIALGARLTLRKGEGRRTLPLEDFFIDYGKTD 344 (467)
T ss_pred -------hHHHHHHHHHhCCHHHcCceecccccccCCCc---hHHHHHHHHcCCEEEEEcCCCcEEEeHHHhhccccccc
Confidence 89999999999999999999999999999999 99999999999999999999999999999996 688
Q ss_pred CCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCc
Q 000629 407 LDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTK 486 (1383)
Q Consensus 407 L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~ 486 (1383)
|+++|||++|+||.+.. +..+.+||+++| +++|||+||+||.++++ +++|+++||+||||+++
T Consensus 345 L~~~EiI~~I~iP~~~~----------~~~~~~~K~~~R-~~~dia~V~~A~~v~~~------~~~i~~~ria~Ggva~~ 407 (467)
T TIGR02963 345 RQPGEFVEALHVPRPTP----------GERFRAYKISKR-FDDDISAVCAAFNLELD------GGVVAEIRIAFGGMAAT 407 (467)
T ss_pred CCCCceEEEEEecCCCC----------CCceEEEEeccc-ccccceeeEEEEEEEEc------CCeEeEEEEEEecCCCC
Confidence 99999999999997654 467789999999 79999999999999996 46899999999999999
Q ss_pred ccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHH
Q 000629 487 HAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGS 545 (1383)
Q Consensus 487 ~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~ 545 (1383)
|+|+.++|++|.||+|+++++++|++.+.+++.|.++. +|++||+.|+.+|++||+.+
T Consensus 408 -p~r~~~~E~~L~G~~~~~~~l~~a~~~l~~~~~p~~d~r~sa~YR~~la~~l~~r~~~~ 466 (467)
T TIGR02963 408 -PKRAAATEAALLGKPWNEATVEAAMAALAGDFTPLSDMRASAEYRLLTAKNLLRRFFLE 466 (467)
T ss_pred -ceehHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999998885 89999999999999999976
No 17
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=100.00 E-value=2e-104 Score=989.90 Aligned_cols=509 Identities=34% Similarity=0.454 Sum_probs=417.0
Q ss_pred cCCCCChhhhccccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEec
Q 000629 754 PKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITR 833 (1383)
Q Consensus 754 ~~~~Gd~e~af~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~ 833 (1383)
..++||+|++|++|+++ ||++|++++|+|++|||++|+|+|+++|+|+||++||+|+.+|..||++||||++||||+.+
T Consensus 17 ~~~~GDve~af~~a~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~~tQ~p~~~r~~va~~lglp~~~V~V~~~ 95 (547)
T PF02738_consen 17 HIERGDVEAAFAEADHV-VEAEYRTPRQAHAPMEPHGAVAWWDEDGRLTVWSSTQWPFHVRRAVAEALGLPPEKVRVISP 95 (547)
T ss_dssp EEEESSHHHHHHHTSEE-EEEEEEE-BB----SS-SEEEEEEETTTEEEEEES-SSHHHHHHHHHHHHTS-GGGEEEEES
T ss_pred ccccCCHHHHHhhCCEE-EEEEEEECCccccCCCCCeEEEEEccCCCEEEEECCcCHhHHHHHHhhhhcCChhHEEEeee
Confidence 57899999999999996 99999999999999999999999997789999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCccHHHHHHHHHHHHcCCCEEEEeChhhhhhhcCCCCceEEEEEEEECCCCcEEEEEEEEEecCCCCCC
Q 000629 834 RVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPD 913 (1383)
Q Consensus 834 ~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~ 913 (1383)
++|||||.|. .....++.||++|+++||||||+|||+|+|+++.+||++.+++|+|+|+||+|+|++++++.|+|+|.+
T Consensus 96 ~~GGgFG~~~-~~~~~~~~aa~~a~~~grPVk~~~tR~e~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Ga~~~ 174 (547)
T PF02738_consen 96 YVGGGFGKKK-QDSPIAVLAALAAKKTGRPVKLVWTREEDFRAGPKRPPTRIRVRAGADKDGKITALDHDIYADGGAYAS 174 (547)
T ss_dssp B-S--TTTTS-STHHHHHHHHHHHHHHSSEEEEE--HHHHHHHS-BB-EEEEEEEEEE-TTS-EEEEEEEEEEEEESS-T
T ss_pred ecCCCCCCcc-ccchHHHHHHHHHhccCceEEEEechHHhcCCCCCccHHHhhhhheECCCCCEEEeeeeeeccCCcccc
Confidence 9999999443 356778899999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-chhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCc
Q 000629 914 VSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSL 992 (1383)
Q Consensus 914 ~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~~~~ 992 (1383)
++. ++...+....++|+|||++++++.|+||++|.++|||||.+|+.|++|++||++|++|||||+|||+||+.+++
T Consensus 175 ~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~g~~Rg~G~~q~~fa~E~~~DelA~~lg~DP~e~R~~N~~~~~-- 252 (547)
T PF02738_consen 175 FSPAVAPRAGAGADGPYRIPNVRIDARAVYTNTPPAGAFRGFGAPQAAFALESFMDELAEKLGMDPLEFRLKNLIDPG-- 252 (547)
T ss_dssp THHHHHHHHHHTTTTTB--SEEEEEEEEEE-SSSSBE-STTTTHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHB-GTT--
T ss_pred ccccchhhhhcccCCCcccccEEEEEEeccCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHhCcChHHHHHhcccccc--
Confidence 875 44555666789999999999999999999999999999999999999999999999999999999999999765
Q ss_pred ccccccCCCccccC-CHHH-HHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeeccCCC-----cceEEEEcCC
Q 000629 993 NLFYESSAGEYAEY-TLPL-IWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLRS-----TPGKVSILSD 1065 (1383)
Q Consensus 993 ~~~~~~~~g~~~~~-~~~~-~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~~~~-----~~a~v~l~~D 1065 (1383)
+.+++|..+++ .+.+ ||+++++.++|++++++.+.++...+|++||+|+++..++.+... +.+.|+|++|
T Consensus 253 ---~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gig~~~~~~~~~~~~~~~~~~~a~v~l~~D 329 (547)
T PF02738_consen 253 ---DRTPTGQPYDSGDYPEDCLEKAAEHSGWRRRQKEVREFGSGNGWRGRGIGLGCAMYGSGTGGGSGDQSSARVRLNPD 329 (547)
T ss_dssp ---EB-TTS-BETS--HHHHHHHHHHHHHCHHHHHHHHHHCCHEESSEEEEEEEEEEEEEESTTSGGGSEEEEEEEE-TT
T ss_pred ---cccccCcccccCcHHHHHHHHHHhhhchhhhhhHHhhccccccccccccCCCccccccccccccccCCcEEEEEEeC
Confidence 44566777766 8888 999999999999999888888888889999999998888877653 5799999999
Q ss_pred CcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccchHHHHHHHHHHHH
Q 000629 1066 GSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILV 1145 (1383)
Q Consensus 1066 Gsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~~g~Av~~A~~~L~ 1145 (1383)
|+|+|.+|..|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|+++|+|+++||++||
T Consensus 330 G~v~v~~~~~e~GqG~~T~~~qiaAe~Lgi--------~~~~V~v~~~dT~~~p~~~~t~gSr~t~~~g~Av~~Aa~~lr 401 (547)
T PF02738_consen 330 GSVTVYTGGVEMGQGSRTALAQIAAEELGI--------PPEDVRVVSGDTDTTPYDGGTGGSRSTYMSGNAVRKAAEDLR 401 (547)
T ss_dssp S-EEEEES--BSSSSHHHHHHHHHHHHHTS---------GGGEEEEECBTTTS-SB--S-TTTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEecccCCcchhhhHHHHHHHHhCC--------ChhhEEEEeCCCcCCCCCCCCccchhhHhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccC-CCcCHHHH--HHHHhhcCceeEEEEeecc-----------CCCcccccceeEEEEEEEEECCCCc
Q 000629 1146 ERLTLLRERLQGQM-GNVEWETL--IQQAHLQSVNLSASSMYVP-----------DFTSVQYLNYGAAVSEVEVNLLTGE 1211 (1383)
Q Consensus 1146 ~rl~~~a~~l~~~~-~~~~~~~~--~~~a~~~~~~l~a~~~~~~-----------~~~~~~~~~~ga~~aEVEVD~~TG~ 1211 (1383)
+||+++++.+++.+ ..+.|++- ...+....+.+.+...+.. .+..+.+++|+++++|||||++||+
T Consensus 402 ~~l~~~Aa~~~~~~~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~eVeVD~~TG~ 481 (547)
T PF02738_consen 402 EKLLEIAAEILGVDPEDLELEDGRVISPAKGVSISEAAIAAYANPPTGFDPGTGGYGPPASYYSFGAHFAEVEVDTETGE 481 (547)
T ss_dssp HHHHHHHHHHTTSSGGGEECHCHETHHHHHHEEHHHEEEHHHCTTSTTCETTTTEESBSSSEEEEEEEEEEEEEETTTSE
T ss_pred HHHHHHHHHhcccccchhhhhhhccccccccccccccccccccccccccccccccccCCccceeeeeeeccccccccccc
Confidence 99999999887643 23445443 2222222222222211110 1134567899999999999999999
Q ss_pred EEEEEEEEEecCCccCChhhhhhhchhhhHhHHHHHhccCceeCCCCcccccCCCCCCCCCCCCCC
Q 000629 1212 TTIVRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYAANSDGLVVSEGTWTYKIPTLDTIP 1277 (1383)
Q Consensus 1212 v~V~r~~~v~D~G~~iNP~~v~GQieGg~~qGiG~aL~Ee~~~d~~G~~l~~~~~dY~iP~~~DiP 1277 (1383)
++|+|+++++|||++|||.+++||||||++||||++|+|++.||++|+++|+||+||++|++.|+|
T Consensus 482 v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~~Glg~al~E~~~~d~~G~~~~~~~~dY~ip~~~d~P 547 (547)
T PF02738_consen 482 VRVLRVVAAHDCGRVINPDIVEGQIEGGIVQGLGYALYEELVYDENGRPLNPNFADYKIPTAADVP 547 (547)
T ss_dssp EEEEEEEEEEEEBS-SBHHHHHHHHHHHHHHHHHHHHT--BEBTTTSEBSTSSTTTST---GGGS-
T ss_pred ccceeeeeeccCCcccCHHHHhhhccccHHHHHHHHhcCCeEECCCCcCCCCChhhCcCCCccccC
Confidence 999999999999999999999999999999999999999999998999999999999999999998
No 18
>TIGR03193 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamma subunit. 4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme.
Probab=100.00 E-value=2.5e-53 Score=428.94 Aligned_cols=147 Identities=38% Similarity=0.669 Sum_probs=139.2
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCcee
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLI 93 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 93 (1383)
|+|+|||++++++ ++|+++|+||||+++||||+|.||++|+||||||+| |+++|+||++|+.+++|++|
T Consensus 2 i~~~vNG~~~~~~-~~~~~~Ll~~LR~~lgltg~K~gC~~G~CGACtVlv----------dg~~v~SCl~~~~~~~G~~V 70 (148)
T TIGR03193 2 LRLTVNGRWREDA-VADNMLLVDYLRDTVGLTGTKQGCDGGECGACTVLV----------DGRPRLACSTLAHRVAGRKV 70 (148)
T ss_pred EEEEECCEEEEee-cCCCCcHHHHHHHhcCCCCCCCCCCCCCCCCCEEEE----------CCeEeeccHhhHhhcCCCcE
Confidence 7899999999996 899999999999999999999999999999999999 79999999999999999999
Q ss_pred EEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCC
Q 000629 94 TTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGY 173 (1383)
Q Consensus 94 ~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy 173 (1383)
+|||||++ .+.+||+|+||+++|++|||||||||||++++||+ ++|+|+ ++||+++|+|||||||||
T Consensus 71 ~TiEgl~~-~~~l~pvq~af~~~~a~QCGfCtPG~vms~~~ll~-----~~p~ps-------~~ei~~al~GnLCRCTGY 137 (148)
T TIGR03193 71 ETVEGLAT-NGRLSRLQQAFHERLGTQCGFCTPGMIMAAEALLR-----RNPSPS-------RDEIRAALAGNLCRCTGY 137 (148)
T ss_pred EEeCCCCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHH-----cCCCCC-------HHHHHHHHcCCccCCCCC
Confidence 99999985 56899999999999999999999999999999995 357774 999999999999999999
Q ss_pred hhHHHHHHHhh
Q 000629 174 RPIADACKSFA 184 (1383)
Q Consensus 174 ~~i~~a~~~~a 184 (1383)
++|++|++.++
T Consensus 138 ~~I~~Av~~aa 148 (148)
T TIGR03193 138 VKIIESVEAAA 148 (148)
T ss_pred HHHHHHHHHhC
Confidence 99999998753
No 19
>PRK09971 xanthine dehydrogenase subunit XdhB; Provisional
Probab=100.00 E-value=3.4e-52 Score=478.60 Aligned_cols=273 Identities=23% Similarity=0.306 Sum_probs=250.1
Q ss_pred eEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eeec-ccCceEEecCCCccccceeec-CCcEEEcccccHHHH
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRD-QTGIEIGATVTISKA 318 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~-~~~~~lIdl~~I~EL~~I~~~-~~~L~IGA~vTl~~l 318 (1383)
+|++|+|++|++++|+ +++++++++|||||++ ++.+ ..|+.+|||++||||+.|+.+ +++|+|||+||++++
T Consensus 6 ~~~~P~sl~Ea~~ll~-----~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~I~~~~~~~l~IGA~vt~~~l 80 (291)
T PRK09971 6 EYHEAATLEEAIELLA-----DNPQAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDGSIRIGAATTFTQI 80 (291)
T ss_pred ceeCCCCHHHHHHHHH-----hCCCCEEEeccchHHHHHhCCCCCCCeEEEcCCChhhhCeEecCCCEEEEEeCCcHHHH
Confidence 8999999999999999 4578999999999988 4443 578999999999999999965 467999999999999
Q ss_pred HHH--HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEE
Q 000629 319 IEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKL 396 (1383)
Q Consensus 319 ~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v 396 (1383)
+++ +++ .+|.|.+++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+|
T Consensus 81 ~~~~~i~~-----------~~p~L~~a~~~ia~~qIRN~aTiGGNi~~a~p~---sD~~~~Llal~A~v~i~~~~g~R~v 146 (291)
T PRK09971 81 IEDPIIQK-----------HLPALAEAAVSIGGPQIRNVATIGGNICNGATS---ADSAPPLFALDAKLEIHSPNGVRFV 146 (291)
T ss_pred hcChHHHH-----------HhHHHHHHHHHhCCHHHhcceecccccccCCcc---hhHHHHHHHcCCEEEEEcCCCcEEE
Confidence 974 443 389999999999999999999999999999998 9999999999999999999999999
Q ss_pred ehhhhcc---CCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCcee
Q 000629 397 MLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRV 473 (1383)
Q Consensus 397 ~l~dF~~---~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i 473 (1383)
|++|||. ++.|.++|||++|+||.+... +..+.+||+.+| +.+|||+||+|+.++++ +++|
T Consensus 147 p~~df~~g~~~t~l~~~Eil~~I~iP~~~~~---------~~~~~~~K~~~R-~~~~~a~v~~a~~~~~~------~g~i 210 (291)
T PRK09971 147 PINGFYTGPGKVSLEHDEILVAFIIPPEPYE---------HAGGAYIKYAMR-DAMDIATIGCAVLCRLD------NGNF 210 (291)
T ss_pred EHHHhcCCccccccCCCceEEEEEeCCCCCC---------CCceEEEEEccc-chhhHhHheeEEEEEEc------CCEE
Confidence 9999997 689999999999999975431 356778999999 79999999999999986 4689
Q ss_pred eeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhhhhc
Q 000629 474 NNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 550 (1383)
Q Consensus 474 ~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~~~~ 550 (1383)
+++||+|||++++ |+|+.++|++|.|+.|++++++++.+.+.+++.|.+|. +|++||+.|+.+|++|++.++..+.
T Consensus 211 ~~~ria~G~v~~~-p~r~~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~~~s~~YR~~l~~~l~~r~l~~~~~~~ 287 (291)
T PRK09971 211 EDLRLAFGVAAPT-PIRCQHAEQTAKGAPLNLETLEAIGELVLQDVAPRSSWRASKEFRLHLIQELTKRVIKEAVAAA 287 (291)
T ss_pred EEEEEEEEcccCc-eeeHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999 99999999999999999999999999999999999885 8999999999999999999987653
No 20
>PRK09908 xanthine dehydrogenase subunit XdhC; Provisional
Probab=100.00 E-value=1.1e-52 Score=428.43 Aligned_cols=154 Identities=41% Similarity=0.704 Sum_probs=140.1
Q ss_pred CCCcccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 7 HGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 7 ~~~~~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
|+.. ++|+|+|||++++++ ++|+++|+||||+. ||||||.||++|+||||||+| |+++|+||++|+.
T Consensus 3 ~~~~-~~i~~~vNG~~~~~~-~~~~~~Ll~~LR~~-gltgtK~GC~~G~CGACtVlv----------dg~~v~SCl~~a~ 69 (159)
T PRK09908 3 HSET-ITIECTINGMPFQLH-AAPGTPLSELLREQ-GLLSVKQGCCVGECGACTVLV----------DGTAIDSCLYLAA 69 (159)
T ss_pred CCCc-eeEEEEECCEEEEEe-cCCCCcHHHHHHHc-CCCCCCCCcCCCCCCCcEEEE----------CCcEeehhHhhHH
Confidence 4433 579999999999996 89999999999985 999999999999999999999 7899999999999
Q ss_pred hcCCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCC
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGN 166 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gn 166 (1383)
+++|++|+|||||++ ++.+||||+||+++|++|||||||||||++++||++ +|.|+ +|++||+++|+||
T Consensus 70 ~~~G~~V~TiEGl~~-~~~l~pvQ~Af~~~~a~QCGyCtPG~ims~~aLl~~-----~~~~~-----~s~~eI~~al~GN 138 (159)
T PRK09908 70 WAEGKEIRTLEGEAK-GGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAK-----PREKP-----LTITEIRRGLAGN 138 (159)
T ss_pred HhCCCEEEeecCCCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHc-----CCCCC-----CCHHHHHHHHcCC
Confidence 999999999999986 578999999999999999999999999999999954 34211 2599999999999
Q ss_pred ccccCCChhHHHHHHHhh
Q 000629 167 LCRCTGYRPIADACKSFA 184 (1383)
Q Consensus 167 lCRCtgy~~i~~a~~~~a 184 (1383)
|||||||++|++|++.+-
T Consensus 139 lCRCTGY~~I~~Av~~~~ 156 (159)
T PRK09908 139 LCRCTGYQMIVNTVLDCE 156 (159)
T ss_pred ccCCCCCHHHHHHHHHHh
Confidence 999999999999998753
No 21
>COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]
Probab=100.00 E-value=1e-51 Score=415.35 Aligned_cols=152 Identities=45% Similarity=0.807 Sum_probs=144.0
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCC
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNG 90 (1383)
Q Consensus 11 ~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 90 (1383)
+++|+|+|||++++++ ++|+++|+|+||++++|||||.||+.|.||||||+| ||++|+||++|++.++|
T Consensus 1 ~~~i~ltvNG~~~~~~-~~p~~~Ll~~LRd~l~ltgtk~GC~~g~CGACtVlv----------DG~~v~SCl~~a~~~~G 69 (156)
T COG2080 1 KMPITLTVNGEPVELD-VDPRTPLLDVLRDELGLTGTKKGCGHGQCGACTVLV----------DGEAVNSCLTLAVQAEG 69 (156)
T ss_pred CCcEEEEECCeEEEEE-eCCCChHHHHHHHhcCCCCcCCCCCCccCCceEEEE----------CCeEehHHHHHHHHhCC
Confidence 3689999999999997 899999999999999999999999999999999999 89999999999999999
Q ss_pred ceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCcccc
Q 000629 91 CLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRC 170 (1383)
Q Consensus 91 ~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRC 170 (1383)
++|+|||||+..+..|||+|+||+++++.|||||||||||++++||++ +|.|+ ++||+++|+||||||
T Consensus 70 ~~ItTiEGl~~~~~~l~~vQ~Af~e~~~~QCGyCtpG~Imsa~~lL~~-----~~~ps-------~~eI~~~lsGnlCRC 137 (156)
T COG2080 70 AEITTIEGLAKKDGGLHPVQQAFLEHDAFQCGYCTPGQIMSATALLDR-----NPAPT-------DEEIREALSGNLCRC 137 (156)
T ss_pred CeEEEeecccCCCCCcCHHHHHHHHcCCCcCCCCcHHHHHHHHHHHHh-----CCCCC-------HHHHHHHHhcCcccc
Confidence 999999999965677899999999999999999999999999999954 57774 999999999999999
Q ss_pred CCChhHHHHHHHhhh
Q 000629 171 TGYRPIADACKSFAA 185 (1383)
Q Consensus 171 tgy~~i~~a~~~~a~ 185 (1383)
|||..|++|++.+++
T Consensus 138 t~Y~~I~~Ai~~aa~ 152 (156)
T COG2080 138 TGYQNIVAAILDAAE 152 (156)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999998774
No 22
>TIGR03198 pucE xanthine dehydrogenase E subunit. This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.
Probab=100.00 E-value=1.5e-51 Score=420.11 Aligned_cols=148 Identities=36% Similarity=0.731 Sum_probs=139.8
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCc
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC 91 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 91 (1383)
..|+|+|||++++++ ++|+++|++|||++++|||||.||++|.||||||+| |+++|+||++|+.+++|+
T Consensus 2 ~~i~f~vNG~~~~~~-~~~~~~Ll~~LR~~~~ltgtK~gC~~G~CGACtVlv----------dG~~v~SCl~~~~~~~G~ 70 (151)
T TIGR03198 2 EQFRFTVNGQAWEVA-AVPTTRLSDLLRKELQLTGTKVSCGIGRCGACSVLI----------DGKLANACLTMAYQADGH 70 (151)
T ss_pred ccEEEEECCEEEEee-cCCCcHHHHHHHhccCCCCCCCCCCCCcCCccEEEE----------CCcEEechHHHHHHhcCC
Confidence 358999999999997 799999999999999999999999999999999999 789999999999999999
Q ss_pred eeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccC
Q 000629 92 LITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCT 171 (1383)
Q Consensus 92 ~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCt 171 (1383)
+|+|||||+. +.+||||+||+++|++|||||||||||++++||++ +|+|+ ++||+++|+|||||||
T Consensus 71 ~v~TiEgl~~--~~l~pvQ~af~~~~a~QCGfCtpG~im~~~~ll~~-----~p~p~-------~~ei~~al~gnlCRCt 136 (151)
T TIGR03198 71 EITTIEGIAE--NELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRE-----TPQPS-------DEDMEEGLSGNLCRCT 136 (151)
T ss_pred EEEecCCcCC--CCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHc-----CCCCC-------HHHHHHHHcCCCcCCC
Confidence 9999999963 57999999999999999999999999999999953 57774 9999999999999999
Q ss_pred CChhHHHHHHHhh
Q 000629 172 GYRPIADACKSFA 184 (1383)
Q Consensus 172 gy~~i~~a~~~~a 184 (1383)
||++|++|+++++
T Consensus 137 gY~~I~~Av~~~~ 149 (151)
T TIGR03198 137 GYGGIIRSACRIR 149 (151)
T ss_pred CCHHHHHHHHHHh
Confidence 9999999999876
No 23
>PRK11433 aldehyde oxidoreductase 2Fe-2S subunit; Provisional
Probab=100.00 E-value=5.6e-50 Score=427.22 Aligned_cols=162 Identities=37% Similarity=0.686 Sum_probs=143.8
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCc
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC 91 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 91 (1383)
.+|+|+|||++++++ ++|+++|+++||++++|||+|.||++|.||||||+| |+++|+||++|+++++|+
T Consensus 50 ~~i~~~VNG~~~~~~-v~~~~tLLd~LR~~l~ltGtK~GC~~G~CGACTVlV----------dG~~v~SCl~la~~~~G~ 118 (217)
T PRK11433 50 SPVTLKVNGKTEQLE-VDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLV----------NGRRLNACLTLAVMHQGA 118 (217)
T ss_pred ceEEEEECCEEEEEe-cCCCCcHHHHHHHhcCCCCCCCCCCCCCcCceEEEE----------CCEEeeeeeeehhhcCCC
Confidence 579999999999997 899999999999999999999999999999999999 799999999999999999
Q ss_pred eeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCC----CCCCCCCCHHHHHHHHhCCc
Q 000629 92 LITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEP----PPGLSKLTISEAEKAIAGNL 167 (1383)
Q Consensus 92 ~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~----~~~~~~~~~~~i~~~l~gnl 167 (1383)
+|+|||||++ .+.+||+|+||+++|++|||||||||||++++||+++++.. |.. ...+..||++||+++|+|||
T Consensus 119 ~ItTiEGL~~-~~~lhpvQ~Af~~~~a~QCGyCTPG~imsa~alL~~~~~~~-~~~~~~~~~~~p~pt~~eIrealsGNl 196 (217)
T PRK11433 119 EITTIEGLGS-PDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGI-PSHVTVDLTAAPELTADEIRERMSGNI 196 (217)
T ss_pred EEEEeCCcCC-CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHhccccC-ccccccccccCCCCCHHHHHHHHcCCc
Confidence 9999999986 57899999999999999999999999999999997643210 000 00022457999999999999
Q ss_pred cccCCChhHHHHHHHhhhc
Q 000629 168 CRCTGYRPIADACKSFAAD 186 (1383)
Q Consensus 168 CRCtgy~~i~~a~~~~a~~ 186 (1383)
||||||++|++|+++++..
T Consensus 197 CRCtgY~~Iv~Av~~~a~~ 215 (217)
T PRK11433 197 CRCGAYSNILEAIEDVAGE 215 (217)
T ss_pred cCCCCcHHHHHHHHHHHhc
Confidence 9999999999999998753
No 24
>TIGR03199 pucC xanthine dehydrogenase C subunit. This gene has been characterized in B. subtilis as the FAD binding-subunit of xanthine dehydrogenase (pucC), acting in conjunction with pucD, the molybdopterin-binding subunit and pucE, the FeS-binding subunit.
Probab=100.00 E-value=3.7e-49 Score=448.11 Aligned_cols=256 Identities=21% Similarity=0.230 Sum_probs=233.9
Q ss_pred cCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eeec--ccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH-
Q 000629 246 PISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV--EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA- 321 (1383)
Q Consensus 246 P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~--~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~- 321 (1383)
|+||+|++++|+ ++++++++||||++++ ++.. ..|+.+|||++||||++|+.++++|+|||+|||++|+++
T Consensus 1 P~sl~ea~~ll~-----~~~~a~ivaGgT~l~~~~~~~~~~~~~~lIdi~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~~ 75 (264)
T TIGR03199 1 PAALDEAWSLLE-----KAPDSTFVSGSTLLQLQWEKGTLPMKQHLVSLEGIDELKGISTSDTHVSIGALTTLNECRKNP 75 (264)
T ss_pred CCCHHHHHHHHH-----hCCCCEEEEccChHHHHHhcCcCCCCCeEEEcCCChhhCcEEecCCEEEEecCCcHHHHhhCh
Confidence 899999999999 4578999999999988 3432 458999999999999999999999999999999999864
Q ss_pred -HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhh
Q 000629 322 -LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEE 400 (1383)
Q Consensus 322 -l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~d 400 (1383)
++ ..+|.|+++++.|||+||||+||+|||||++ . ||++|+|+||||+|+|.+ .|+|+||++|
T Consensus 76 ~i~-----------~~~p~L~~a~~~ia~~qIRN~aTlGGNl~~~--~---sD~~p~Llal~A~v~i~~-~g~r~vp~~~ 138 (264)
T TIGR03199 76 LIK-----------RALPCFVDAASAIAAPGVRNRATIGGNIASG--I---GDFIPALLVLGAELIVYQ-KELIRLPLGA 138 (264)
T ss_pred HhH-----------hHhHHHHHHHHHhcCHHHhcceecHHhccCc--c---cchHHHHHHcCCEEEEEe-CCEEEEEHHH
Confidence 22 2499999999999999999999999999998 4 899999999999999999 8999999999
Q ss_pred hccCCCCCCCceEEEEEc-CCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEE
Q 000629 401 FLERPPLDSRSILLSVEI-PCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLA 479 (1383)
Q Consensus 401 F~~~~~L~~~eil~~I~I-P~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria 479 (1383)
||..+.|.++|||++|.| |.+.. +..+.+||+++| +.+++++||+|+.+++++ +++|+++||+
T Consensus 139 f~~~~~l~~~Eii~~I~i~p~~~~----------~~~~~~~k~~~R-~~~~~a~v~~a~~~~~~~-----~~~i~~~ria 202 (264)
T TIGR03199 139 WLSEEDFKPTAIVTRVIIGPRAET----------GEFVFYHKVGRR-ETFTGSLVVVAGRFLLDG-----SQTIKEIRLA 202 (264)
T ss_pred hhhccCCCCCcEEEEEEEECCCCC----------CCcEEEEEEecc-chhHHHHheeeEEEEEcC-----CCeEEEEEEE
Confidence 999889999999999999 65533 456778999999 789999999999999863 4699999999
Q ss_pred EcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHH
Q 000629 480 FGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLY 540 (1383)
Q Consensus 480 ~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~ 540 (1383)
|||++++ |+|+.++|++|.|++|++++++++.+.+.+++.|.+|. +|++||+.|+++|+.
T Consensus 203 ~Ggv~~~-p~r~~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~~~s~~YR~~l~~~~~~ 263 (264)
T TIGR03199 203 VGGADIT-PRRLLDSEAKLMAPPWDPHLLAELYKTIIQELPFSSDPFATAAYRKKVAANVIV 263 (264)
T ss_pred eecCCCc-eeeHHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHhc
Confidence 9999999 99999999999999999999999999999999999885 899999999999874
No 25
>TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit. This model represents the second largest chain, beta, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=6.1e-49 Score=451.48 Aligned_cols=272 Identities=21% Similarity=0.273 Sum_probs=240.4
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eee-cccCceEEecCCCccccceeecCCcEEEcccccHHH
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1383)
Q Consensus 240 ~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~ 317 (1383)
.|+|++|+|++|++++|+ +++++++++|||||++ ++. ...|+.+|||++||||+.|+.++++|+|||+|||++
T Consensus 4 ~f~~~~P~sl~eA~~ll~-----~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~~ 78 (321)
T TIGR03195 4 DFRTLRPASLADAVAALA-----AHPAARPLAGGTDLLPNLRRGLGQPETLVDLTGIDEIAQLSTLADGLRIGAGVTLAA 78 (321)
T ss_pred CceEECCCCHHHHHHHHh-----hCCCCEEEEccchHHHHHhcccCCCCeEEECCCChhhccEEecCCEEEEeccCcHHH
Confidence 478999999999999999 4578999999999988 443 367899999999999999999999999999999999
Q ss_pred HHHH--HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccC----------------------------
Q 000629 318 AIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR---------------------------- 367 (1383)
Q Consensus 318 l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp---------------------------- 367 (1383)
|+++ +++ .+|.|.++++.|||+||||+||||||||+++|
T Consensus 79 l~~~~~i~~-----------~~p~L~~a~~~ias~qIRN~aTiGGNi~~~~~c~~~~~~~~~~~~~~~c~~~~~~~c~~~ 147 (321)
T TIGR03195 79 LAEDALVRT-----------RWPALAQAARAVAGPTHRAAATLGGNLCLDTRCIYYNQSEWWRSGNGYCLKYRGDKCHVA 147 (321)
T ss_pred HhhChhhHh-----------HhHHHHHHHHHhCCHHHhCceecHHhhhccCCCcccccccccccccccccccCCcccccc
Confidence 9885 333 38999999999999999999999999996543
Q ss_pred -------CCCCCchHHHHHhcCcEEEEEeCCceEEEehhhhcc-----CCCCCCCceEEEEEcCCCCcccccccCCCcce
Q 000629 368 -------KHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLE-----RPPLDSRSILLSVEIPCWDLTRNVTSETNSVL 435 (1383)
Q Consensus 368 -------~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF~~-----~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~ 435 (1383)
.+++||++|+|+||||+|+|.+.+|+|+||++|||. ++.|+++|||++|+||... +.
T Consensus 148 ~~~~~c~a~p~sD~~~~LlAldA~v~i~~~~g~R~vpl~dF~~~~g~~~t~L~~~Eiit~I~iP~~~-----------~~ 216 (321)
T TIGR03195 148 PKSDRCYAAFSGDVAPALLVLDAEAEIVGPAGVRRVPLAELYVEDGAAHLTLEPGEVLAAVRVPPTG-----------GW 216 (321)
T ss_pred CCCccccCCCchHHHHHHHHcCCEEEEEeCCccEEEEHHHHhcccCCccccCCCCCeEEEEEecCCC-----------CC
Confidence 123489999999999999999999999999999997 4689999999999999642 23
Q ss_pred EEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHH
Q 000629 436 LFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLL 515 (1383)
Q Consensus 436 ~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 515 (1383)
.+.++|+.+| ...||+++++|+.++.+ +++|+++||+|||++++ |+|+.++ ++|.|+.|+++++++|.+++
T Consensus 217 ~~~y~k~~~r-~a~~~~~~~vav~l~~~------~~~i~~~ria~Ggva~~-p~r~~~~-e~l~G~~~~~~~~~~a~~~~ 287 (321)
T TIGR03195 217 TSAYSKVRVR-GAIDFPLAGVAVALQRD------GDRIAGLRVALTGTNSR-PLMVPGT-DALAGRPLDDAAAEEIARLV 287 (321)
T ss_pred ccEEEEEecC-ccccceeEEEEEEEEeC------CCeEEEEEEEEECccCc-eeehHHH-HHhcCCCCCHHHHHHHHHHH
Confidence 4455666556 67888999988888775 46899999999999999 9999999 55799999999999999999
Q ss_pred hhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhh
Q 000629 516 RDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLT 547 (1383)
Q Consensus 516 ~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~ 547 (1383)
.+++.|.++. +|++|||.|+.+|+.|++.+++
T Consensus 288 ~~~~~p~~d~~~s~~YRr~l~~~l~~r~~~~~~ 320 (321)
T TIGR03195 288 RKTSQPMRTTLMGVKYRRRVLLAIARRLVDQLW 320 (321)
T ss_pred HhhCCCccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999998875 8999999999999999998764
No 26
>COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]
Probab=100.00 E-value=4.8e-46 Score=417.03 Aligned_cols=271 Identities=26% Similarity=0.303 Sum_probs=243.7
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE-eeec-ccCceEEecCCCccccceeecCCc-EEEcccccHH
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTG-IEIGATVTIS 316 (1383)
Q Consensus 240 ~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~-L~IGA~vTl~ 316 (1383)
.++|++|+|++||+++++ ..+++++++|||+|.. +|.. ..|..+|||++|+|+..+...+++ |+|||+||++
T Consensus 3 ~f~y~rp~Sv~eA~~ll~-----~~~~a~~laGGt~L~~~~k~~~~~p~~lVdI~~l~~~~~~~~~~g~~l~IGA~vt~~ 77 (284)
T COG1319 3 NFEYYRPASVEEALNLLA-----RAPDAKYLAGGTDLLPLMKLGIERPDHLVDINGLDELLGIVTTEGGSLRIGALVTLT 77 (284)
T ss_pred ceEEECCCCHHHHHHHHH-----hCCCcEEeeCcchHHHHhhcccCCcceEEEecCChhhhceEeecCCEEEEeecccHH
Confidence 378999999999999999 4579999999999988 5654 689999999999988887777555 9999999999
Q ss_pred HHHHH--HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceE
Q 000629 317 KAIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCE 394 (1383)
Q Consensus 317 ~l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R 394 (1383)
+|.++ ++.. +|.|.+++..+||+||||+||||||||+++|. +|++|+|+||||+|++.+..|+|
T Consensus 78 ei~~~~~~~~~-----------~p~L~ea~~~ia~~qvRN~aTiGGn~c~a~p~---aD~~~aLlaLdA~v~~~~~~g~r 143 (284)
T COG1319 78 EIARHPAVRRI-----------PPALSEAASAIASPQVRNRATIGGNLCNADPA---ADLAPALLALDAEVEIRSPGGER 143 (284)
T ss_pred HHHhChhhhhh-----------chHHHHHHHHhcChhhcceeeecchhccCCCc---hhhHHHHHHcCCEEEEecCCccE
Confidence 99976 4443 99999999999999999999999999999998 99999999999999999999999
Q ss_pred EEehhhhcc---CCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCc
Q 000629 395 KLMLEEFLE---RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGI 471 (1383)
Q Consensus 395 ~v~l~dF~~---~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~ 471 (1383)
++|++|||+ .+.|+++|||++|+||.++. ..+.+||..+|+...+++.|.+|..++. +
T Consensus 144 ~i~~~~f~~~p~~t~l~~gelit~v~lP~~~~-----------~~~~~~kk~r~r~~~~~~~vsvA~~~~~--------~ 204 (284)
T COG1319 144 TIPIEDFFRGPGETALEPGELITAVILPPPPA-----------ARGAYYKKVRRRASFAIALVSVAAKLRG--------D 204 (284)
T ss_pred EEEHHHhhcCccccccCCCcEEEEEEcCCCcc-----------CCccEEEEeecchhhhHHHHHHHhhhcc--------c
Confidence 999999997 67899999999999999732 3345677776657788888888887654 2
Q ss_pred eeeeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhhhh
Q 000629 472 RVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 549 (1383)
Q Consensus 472 ~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~~~ 549 (1383)
+|+++||++||++++ |+|+.++|+.|.|+++++++++.+.+.+.+++.|.+|. +|++||+.|+++++.|.+.++..+
T Consensus 205 ~v~~~RvAlgg~a~~-p~R~~~~E~~L~~~~l~~~~~~~~~~~~~~~~~p~~d~r~s~~yr~~l~~~~~~ral~~a~~~ 282 (284)
T COG1319 205 RVSEARVALGGVAPK-PWRLEDAEAALLGKPLSLETLEAAAEAAMQEAAPISDVRGSAEYRRKLAKVLLARALAEAQGR 282 (284)
T ss_pred ceeeeeeeecccCCc-ceehHHHHHHhhCCCCChHHHHHHHHHhhcccCCcccccchHHHHHHHHHHHHHHHHHHhhhc
Confidence 899999999999999 99999999999999999999999999999999999885 999999999999999999988764
No 27
>PRK09799 putative oxidoreductase; Provisional
Probab=100.00 E-value=4.3e-45 Score=411.88 Aligned_cols=250 Identities=21% Similarity=0.281 Sum_probs=219.8
Q ss_pred eEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~ 321 (1383)
+|++|+|++|++++|+++ .++++++||||+|++......++.+|||++| ||++|+.++++|+|||+|||++++++
T Consensus 4 ~y~~P~sl~Ea~~ll~~~----~~~a~ilAGGT~L~~~~~~~~~~~lIdi~~i-eL~~I~~~~~~l~IGA~vT~~~l~~~ 78 (258)
T PRK09799 4 QFFRPDSVEQALELKRRY----QDEAVWFAGGSKLNATPTRTDKKIAISLQDL-ELDWIEWDNGALRIGAMSRLQPLRDA 78 (258)
T ss_pred cEeCCCCHHHHHHHHHhC----CCCCEEEecCCChHhhhCCCCCCEEEEcCCC-CCCeEEecCCEEEEccCCcHHHHHhC
Confidence 799999999999999953 2469999999999873233578899999999 99999999999999999999999876
Q ss_pred HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhhh
Q 000629 322 LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEF 401 (1383)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~dF 401 (1383)
. . ..+.|.++++.|||+||||+||||||||+++|. ||++|+|+||||+|+|.+. |++|++||
T Consensus 79 ~--~----------~~~~L~~a~~~vas~qIRN~aTiGGNl~~a~p~---sD~~p~LlAldA~v~l~~~---r~vpl~~f 140 (258)
T PRK09799 79 R--F----------IPAALREALGFVYSRHLRNQSTIGGEIAARQEE---SVLLPVLLALDAELVFGNG---ETLSIEDY 140 (258)
T ss_pred c--c----------cHHHHHHHHHHhCCHHHhccchhHHHhhcCCcc---HHHHHHHHHcCCEEEEecC---cEEeHHHh
Confidence 2 1 124899999999999999999999999999998 9999999999999999884 89999999
Q ss_pred ccCCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEc
Q 000629 402 LERPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFG 481 (1383)
Q Consensus 402 ~~~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~G 481 (1383)
|.. .++|||++|+||.+. ..+.+||++ | +.+|+|+||+|+.++++. .+||+||
T Consensus 141 ~~g---~~~Eil~~I~iP~~~------------~~~~~~K~~-r-~~~~~a~v~~A~~~~~~~----------~~ria~G 193 (258)
T PRK09799 141 LAC---PCDRLLTEIIIPDPY------------RTCATRKIS-R-SQAGLTVVTAAVALTDHD----------GMRIALD 193 (258)
T ss_pred cCC---CCCcEEEEEEcCCCC------------CcceEEEec-c-cccChhhheeEEEEEEcC----------CeEEEEE
Confidence 975 479999999999653 234568886 6 588999999999998852 4899999
Q ss_pred ccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhhhh
Q 000629 482 AFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 549 (1383)
Q Consensus 482 gv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~~~ 549 (1383)
|++++ |+|+.++|+ |.++++++.++ +.+++.|.+|. +|++||++++++|+.|+|.++.+.
T Consensus 194 gv~~~-p~r~~~~E~----~~~~~~~~~~a---~~~~~~p~~d~~~s~~YR~~~~~~l~~r~l~~~~~~ 254 (258)
T PRK09799 194 GVASK-PLRLHDVEK----QNLEGNALEQA---VANAIFPQEDLRGSVAYKRYIAGVLVADLYADCQQA 254 (258)
T ss_pred CCCCc-ccchHHHhc----CCCCHHHHHHH---HHhcCCCCccCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 999999998 88999988876 55889998885 899999999999999999998764
No 28
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit. This protein is suggested by Bebien, et al., to be the FAD-binding subunit of a molydbopterin-containing selenate reductase. Our comparative genomics suggests it to be a subunit of a selenium-dependent molybdenum hydroxylase for an unknown substrate.
Probab=100.00 E-value=3.9e-44 Score=403.48 Aligned_cols=251 Identities=21% Similarity=0.274 Sum_probs=218.5
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
.+|++|+|++|++++|+++ .++++++||||||.+......+..+|||++| ||++|+.++++|+|||+||+++|++
T Consensus 2 ~~y~~P~sl~Ea~~ll~~~----~~~a~~lAGGTdL~~~~~~~~~~~lIdl~~i-eL~~I~~~~~~l~IGA~~t~~~l~~ 76 (257)
T TIGR03312 2 EQFFRPESTIQALELKKRH----TGVAVWFAGGSKLNATPTRTDKKVAISLDKL-ALDKIELQGGALHIGAMCHLQSLID 76 (257)
T ss_pred CceECCCCHHHHHHHHHhC----CCCCEEEecCcchhhhhcccCCCEEEEcCCC-CCCcEEecCCEEEEEeCCcHHHHHh
Confidence 4799999999999999943 2479999999999874333567899999999 9999999999999999999999987
Q ss_pred HHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEEEehhh
Q 000629 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEE 400 (1383)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~v~l~d 400 (1383)
+. . ..+.|.++++.|||+||||+||+|||||+++|. +|++|+|+||||+|+|.+. |+||++|
T Consensus 77 ~~--~----------~~~~L~~aa~~va~~qIRN~gTlGGNl~~a~p~---~D~~~~LlaldA~v~l~~~---r~vp~~d 138 (257)
T TIGR03312 77 NE--L----------TPAALKEALGFVYSRHIRNQATIGGEIAAFQSE---SLLLPVLLALKATVVLANA---SQMDIED 138 (257)
T ss_pred Cc--c----------hHHHHHHHHHHhCCHHHhccccHHHHhhcCCCc---hHHHHHHHHcCCEEEEecC---cEEeHHH
Confidence 51 1 123799999999999999999999999999999 9999999999999999876 8999999
Q ss_pred hccCCCCCCCceEEEEEcCCCCcccccccCCCcceEEEEEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEE
Q 000629 401 FLERPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAF 480 (1383)
Q Consensus 401 F~~~~~L~~~eil~~I~IP~~~~~~~~~~~~~~~~~~~~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~ 480 (1383)
||.. .++|||++|+||.+.. .+.++|+ .| +.+|||+||+|+.++++. ++||+|
T Consensus 139 F~~g---~~~Ell~~V~iP~~~~------------~~~~~k~-~R-~~~~~a~v~~A~~~~~~~----------~~ria~ 191 (257)
T TIGR03312 139 YLAS---EQRELIVEVIIPNPNL------------MCATRNI-SR-SAAGLAVVTAAVAVDQKG----------NMRIAL 191 (257)
T ss_pred hcCC---CCCcEEEEEEcCCCCC------------CceEEEe-cC-cccchhhheeEEEEEecC----------CEEEEE
Confidence 9975 4799999999997532 3456788 67 688999999999988751 489999
Q ss_pred cccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhcCCCCCCC-CcHHHHhHHHHHHHHHHHHHhhhh
Q 000629 481 GAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 549 (1383)
Q Consensus 481 Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~s~eYR~~la~~L~~r~l~~~~~~ 549 (1383)
||++++ |+|+.++|+. .++++.++++ +.+++.|.+|. +|++|||+|+++|++|++.++.+-
T Consensus 192 ggv~~~-p~r~~~~E~~----~~~~~~~~~~---~~~~~~p~~D~r~sa~YRr~~~~~l~~r~l~~~~~~ 253 (257)
T TIGR03312 192 DGVSPV-PVRLRDVEAQ----DLKGEALEQA---VADAIHPVADLCGSVAYKRYIAGVVVADLLAECQQL 253 (257)
T ss_pred EccCCc-eeehHHHhhC----cCCHHHHHHH---HHhcCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999985 6777877654 66889999986 899999999999999999998764
No 29
>PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain. They include aldehyde oxidase (1.2.3.1 from EC), that converts an aldehyde and water to an acid and hydrogen peroxide, and xanthine dehydrogenase (1.1.1.204 from EC), that converts xanthine to urate. These enzymes require molybdopterin and FAD as cofactors and have and two 2FE-2S clusters. Another enzyme that contains this domain is the Pseudomonas thermocarboxydovorans carbon monoxide oxygenase.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2E1Q_C 2CKJ_A 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B ....
Probab=100.00 E-value=4.9e-36 Score=318.98 Aligned_cols=163 Identities=34% Similarity=0.488 Sum_probs=140.7
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEee-ec-ccCceEEecCCCccccceeecCCcEEEcccccHHH
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYK-EV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1383)
Q Consensus 240 ~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k-~~-~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~ 317 (1383)
.++|++|+|++||+++++ .+++++++||||+++++. .. ..++.+|||++||||++|+.++++|+|||+||+++
T Consensus 2 ~~~~~~P~sl~ea~~ll~-----~~~~a~~vaGgT~l~~~~~~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~ 76 (171)
T PF00941_consen 2 PFEYFRPKSLEEALELLA-----KGPDARIVAGGTDLGVQMREGILSPDVLIDLSRIPELNGISEDDGGLRIGAAVTLSE 76 (171)
T ss_dssp S-EEEE-SSHHHHHHHHH-----HGTTEEEESS-TTHHHHHHTTS---SEEEEGTTSGGGG-EEEETSEEEEETTSBHHH
T ss_pred CeEEEccCCHHHHHHHHh-----cCCCCEEEeCCCccchhcccCccccceEEEeEEecccccEEEeccEEEECCCccHHH
Confidence 479999999999999999 479999999999999943 33 47999999999999999999999999999999999
Q ss_pred HHHH--HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCceEE
Q 000629 318 AIEA--LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEK 395 (1383)
Q Consensus 318 l~~~--l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~R~ 395 (1383)
++++ +++ .+|.|++++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+
T Consensus 77 l~~~~~~~~-----------~~p~L~~~~~~ias~~IRn~aTiGGNl~~~~~~---sD~~~~Llal~A~v~i~~~~g~r~ 142 (171)
T PF00941_consen 77 LEESPLIQQ-----------YFPALAQAARRIASPQIRNRATIGGNLCNASPA---SDLAPALLALDARVEIASPDGTRT 142 (171)
T ss_dssp HHHHHHHHH-----------HHHHHHHHHCTSS-HHHHTT-BHHHHHHHTBTT----SHHHHHHHTT-EEEEEETTEEEE
T ss_pred Hhhcchhhh-----------hHHHHHHHHHHhCCHhHeeeeeeccccccCccc---ccHHHHHHHhCcEEEEEcCCeeEE
Confidence 9997 333 499999999999999999999999999999998 999999999999999999999999
Q ss_pred Eehhhhcc---CCCCCCCceEEEEEcCCC
Q 000629 396 LMLEEFLE---RPPLDSRSILLSVEIPCW 421 (1383)
Q Consensus 396 v~l~dF~~---~~~L~~~eil~~I~IP~~ 421 (1383)
+|++|||. ++.|+++|||++|+||.|
T Consensus 143 ~~~~~f~~g~~~~~l~~~eli~~I~iP~~ 171 (171)
T PF00941_consen 143 VPLEDFFTGPRKTDLEPGELITSIRIPKP 171 (171)
T ss_dssp EEGGGGEECTTEESS-TTEEEEEEEEES-
T ss_pred EEHHHhcCccccccCCCCcEEEEEECCCC
Confidence 99999997 678999999999999975
No 30
>PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases. The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A ....
Probab=99.96 E-value=6.9e-30 Score=230.88 Aligned_cols=75 Identities=51% Similarity=0.998 Sum_probs=61.7
Q ss_pred EecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHHhCCccccCCCh
Q 000629 95 TSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYR 174 (1383)
Q Consensus 95 TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~ 174 (1383)
|||||++ ++.|||||++|+++|++|||||||||||++++||++ +|+|+ ++||+++|+|||||||||+
T Consensus 1 TvEGl~~-~~~~~~iq~af~~~~a~QCGfCtpG~im~~~~ll~~-----~~~p~-------~~ei~~al~gnlCRCTgY~ 67 (75)
T PF01799_consen 1 TVEGLAS-DGELHPIQQAFVEHGAVQCGFCTPGMIMAAYALLRR-----NPDPT-------EEEIREALSGNLCRCTGYR 67 (75)
T ss_dssp -GGGSSB-TTB--HHHHHHHHTT--SSSSSHHHHHHHHHHHHHH-----SSS-C-------HHHHHHHTTTS--SSSTSH
T ss_pred CcCcCCC-CCCcCHHHHHHHHhCCCcCCcchHHHHHHHHHHhhc-----ccchh-------hHHHHHHHHcCccCCCCcH
Confidence 8999975 789999999999999999999999999999999965 46664 9999999999999999999
Q ss_pred hHHHHHHH
Q 000629 175 PIADACKS 182 (1383)
Q Consensus 175 ~i~~a~~~ 182 (1383)
+|++|++.
T Consensus 68 ~I~~Av~~ 75 (75)
T PF01799_consen 68 PIVEAVRQ 75 (75)
T ss_dssp HHHHHHH-
T ss_pred HHHHHHhC
Confidence 99999973
No 31
>PF01315 Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; InterPro: IPR000674 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1N63_E 1N60_B 1ZXI_E 1N5W_E 1N62_B 1N61_E 3AN1_B 2E3T_A 1WYG_A 2W3R_D ....
Probab=99.94 E-value=4.1e-28 Score=239.45 Aligned_cols=107 Identities=43% Similarity=0.640 Sum_probs=89.0
Q ss_pred cccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCCCCCCCCc-cccCCC--cccccCCc
Q 000629 618 SGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGS-KTIFGS--EPLFADEL 694 (1383)
Q Consensus 618 tG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~~~~~-~~~~~~--~p~la~~~ 694 (1383)
||+++|++|++ ++||||+++||||++||+|+|||+++|+++|||++|+|++|+| +.+... .....+ +|+|++++
T Consensus 1 TG~a~Y~~Di~-~~~~l~~~~vrS~~a~a~I~sid~~~A~~~pGV~~v~t~~Dip--~~~~~~~~~~~~~~~~~~la~~~ 77 (111)
T PF01315_consen 1 TGEARYVDDIP-PPGMLYAAFVRSPIAHARIKSIDTSEALAMPGVVAVITAEDIP--GINPNGGLPIPHDEPQPVLADDK 77 (111)
T ss_dssp TT-S-BGGGSC-STTTEEEEEEE-SSSSEEEEEEEGHHHHHSTTEEEEEEGGGHS--SGSEESCSCSTTSSEEESS-SSE
T ss_pred CcCeEcccccC-CCCCeEEEEEecCcCcEEEEEEecHHHccCCCEEEEEEecccC--ccccCccccccCCCceEeccCCe
Confidence 89999999997 6899999999999999999999999999999999999999999 433211 112233 57999999
Q ss_pred eeecCCeEEEEEECCHHHHHHhcccceEEEccCCC
Q 000629 695 TRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNL 729 (1383)
Q Consensus 695 Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l 729 (1383)
|+|+|||||+|||+|+++|++|+++|+|+| |+|
T Consensus 78 V~y~GqpVa~VvAet~~~A~~Aa~~V~V~Y--e~l 110 (111)
T PF01315_consen 78 VRYVGQPVALVVAETREAARDAAELVKVEY--EEL 110 (111)
T ss_dssp ESSTT-EEEEEEESSHHHHHHHHHT-EEEE--EE-
T ss_pred EeECCCeEEEEEECCHHHHHHHhcCcEEEe--EeC
Confidence 999999999999999999999999999999 877
No 32
>PF03450 CO_deh_flav_C: CO dehydrogenase flavoprotein C-terminal domain; InterPro: IPR005107 Proteins containing this domain form structural complexes with other known families, such as IPR008274 from INTERPRO and IPR001041 from INTERPRO]. The carbon monoxide (CO) dehydrogenase of Oligotropha carboxidovorans is a heterotrimeric complex composed of a apoflavoprotein, a molybdoprotein, and an iron-sulphur protein. It can be dissociated with sodium dodecylsulphate []. CO dehydrogenase catalyzes the oxidation of CO according to the following equation []: CO + H2O = CO2 + 2e + 2H+ Subunit S represents the iron-sulphur protein of CO dehydrogenase and is clearly divided into a C- and an N-terminal domain, each binding a [2Fe-2S] cluster [].; PDB: 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B 3UNI_A 3AMZ_A ....
Probab=99.67 E-value=1.9e-16 Score=154.93 Aligned_cols=101 Identities=27% Similarity=0.390 Sum_probs=93.9
Q ss_pred EEEeccCCCCCchhhhccceEEEEcCCCCCCCceeeeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHHhhc
Q 000629 439 TYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDS 518 (1383)
Q Consensus 439 ~~K~~~R~~~~d~a~vnaa~~v~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e 518 (1383)
+||+.+| +.+|||++|+|+.+.+++ +++|+++||++||++++ |+|+.++|++|.|++|++++++++.+.+.++
T Consensus 2 ayk~~~R-~~~d~a~v~~a~~~~~~~-----~~~i~~~ria~g~v~~~-p~r~~~~E~~L~g~~~~~~~~~~~~~~~~~~ 74 (103)
T PF03450_consen 2 AYKIGRR-KANDIAIVNVAVLVSVDD-----DGRIEDARIAVGGVAPT-PVRAEEVEAALIGKPLSEETLEEAAEAVSEE 74 (103)
T ss_dssp EEEESSS-SSSSSSSEEEEEEEEEET-----TSEEEEEEEEEESSSSS-TEE-HHHHHHTTTSBSSHHHHHHHHHHHHHH
T ss_pred CeeccCc-cccHHHHHhhhheEEEec-----CceEEEEEEEEeccccc-eeehHHHHHHHhhcchhhhhHHHHHHHHHhc
Confidence 4688888 799999999999999984 45999999999999999 9999999999999999999999999999999
Q ss_pred CCCCCCC-CcHHHHhHHHHHHHHHHHHHh
Q 000629 519 VVPEDGT-SIPAYRSSLAVGFLYEFFGSL 546 (1383)
Q Consensus 519 ~~p~~~~-~s~eYR~~la~~L~~r~l~~~ 546 (1383)
+.|.++. +|++||++|+.+|++|+|.++
T Consensus 75 ~~~~~d~r~s~~YR~~l~~~l~~ral~~~ 103 (103)
T PF03450_consen 75 IDPISDMRASAEYRRHLARVLVRRALEEV 103 (103)
T ss_dssp THHCTTTTBTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 9999885 899999999999999999874
No 33
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=99.34 E-value=3.9e-14 Score=182.09 Aligned_cols=416 Identities=14% Similarity=0.089 Sum_probs=250.1
Q ss_pred cccCCCCCCCC-CcccccchhhhccccccccccCCCCCCcEEEEEEEcCCCCcEeccccCcccCCCCCEEEEEEcCCCCC
Q 000629 595 VQLSREYYPVG-EPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPE 673 (1383)
Q Consensus 595 ~~~~~~~~~vG-~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~aha~I~sID~s~A~~~pGVv~Vvt~~Dip~ 673 (1383)
.+.+..+.++| ...++ |+. ++|+.+.|..|.. .++||+..|-+++.--..|.. |...+...++++.+.-
T Consensus 176 ~~~~~~~E~~g~~a~~~-d~~-~lt~~~~tQ~~~~-~~~~l~~~l~~p~~~vrvi~~-dvGggfG~K~~~~~~~------ 245 (731)
T COG1529 176 RKDPNPMEPHGVVAVPD-DGD-KLTVWASTQIPHR-LRGMLAAVLGIPPSKVRVISP-DVGGGFGSKGVVYVEE------ 245 (731)
T ss_pred CcCccCcccccceeeEc-CCC-eEEEEEccCCchH-HHHHHHHHhCCCHHHeEEecC-CCCcccCCcccceeHH------
Confidence 44567788899 67788 777 9999999999997 579999999855544444444 8888877777544432
Q ss_pred CCCCCCccccCCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEccCCCCCCccCHHHHhhc-CCCcccCCcc
Q 000629 674 GGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDR-SSLFEVPSFL 752 (1383)
Q Consensus 674 ~g~~~~~~~~~~~~p~la~~~Vry~GqpVA~VvAes~~~A~~Aa~lI~Vey~~e~l~p~v~~~~~Al~~-~a~~~~~~~~ 752 (1383)
+++-...+-.|-||.++-..++......-.. +...+.+-+... +.+......
T Consensus 246 ---------------~~~~~aa~~~grpVk~~~tR~e~~~~~~~~~-----------~~~~~~~~~a~~dg~l~~~~~~- 298 (731)
T COG1529 246 ---------------ILAALAAVVAGRPVKWIETREELFVATGHRR-----------ATLIDVKLGADKDGRLLAIKGT- 298 (731)
T ss_pred ---------------HHHHHHHHhcCCCeEEecchHHhhhccCCCC-----------CceEEeeeecCcCCcEEeeeee-
Confidence 1111112223455654443333222110000 011111111111 111000000
Q ss_pred ccCCCCC-----hhhhc---cccCeeeEEEEEEecccccCCCCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCC
Q 000629 753 YPKPVGD-----ISKGM---NEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIP 824 (1383)
Q Consensus 753 ~~~~~Gd-----~e~af---~~A~~vvve~~~~~~~~~h~~mEp~~avA~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp 824 (1383)
.....|+ +...+ ....+. ++..|..++..|..||| ++.....++. ..||.+...++.+|+.|||+
T Consensus 299 ~~~~~Gay~~~~~~~~~~~~~~g~Y~-i~~~~~~~~~v~tn~~p-~~~~Rg~g~~-----~~~~a~E~~~d~lA~~Lgid 371 (731)
T COG1529 299 VAADTGAYNGPTVPAAAAGLARGPYK-IEAVYIEPYLVHTNMPP-NGAYRGAGRP-----EGTFALERAVDELAEELGID 371 (731)
T ss_pred EEecCCCccccchhHHHHHhcCCcee-cccceeeeEEEEcCCCC-CcccccCCCc-----hhHHHHHHHHHHHHHHhCCC
Confidence 0112222 22222 223355 89999999999999999 6666654332 88999999999999999999
Q ss_pred CCcEEEEeccCCCCCC-CCCCCccHHHHHHHHHHHHcC---CCEEEEeChhhhhhhcCCCCceE--------EEEEEEEC
Q 000629 825 EHNVRVITRRVGGAFG-GKAIKAMPVATACALAAYKLC---RPVRIYVKRKTDMIMVGGRHPMK--------ITYSVGFK 892 (1383)
Q Consensus 825 ~~kVrV~~~~vGGgFG-~K~~~~~~~~~~aAlaA~~~g---RPVkl~~sR~E~~~~~~~R~~~~--------~~~k~g~d 892 (1383)
+.+||++...-+|+|| ++......+...+..++++++ ||+|..|+|++++.....+.-.. ...++-++
T Consensus 372 p~eiR~~n~~~~g~~~~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~~~~~~~~~~~~~a~v~~~ 451 (731)
T COG1529 372 PVEIRLRNLIRGGPFGLGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAMYTEPSGAGPGEGARVRLE 451 (731)
T ss_pred HHHHhhhhccccCCCCCcccccCccHHHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEEEEEeccCCCCCcEEEEEc
Confidence 9999999999999999 444333344445556778877 99999999999987543333221 22445556
Q ss_pred CCCcEEEEEEEEEecCCCCCCCCCchhhhccccCCCCcCCcEEEEEEEeecCCCCcCccCCCChhHHHHHHHHHHHHHHH
Q 000629 893 SNGKITALQLNILIDAGLSPDVSPIMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVAS 972 (1383)
Q Consensus 893 ~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~ 972 (1383)
.||++.......-.-.|.+. .....+.-.|.||+-+++....-|..+ ..++|.+|+....|+.|.+++++++
T Consensus 452 ~~g~v~v~~g~~~~G~G~~t-------~~~q~~ae~lgip~~~V~v~~gDt~~~-~~~~~s~GS~~~~~~~~A~~~a~~~ 523 (731)
T COG1529 452 ADGTVTVRTGATDIGQGTDT-------VLAQIAAEELGIPPDDVEVVHGDTDVP-VGGWGSVGSRGTAVAGSAVIDAAAK 523 (731)
T ss_pred CCCcEEEEECCccCCCcHHH-------HHHHHHHHHhCCCHHHEEEEecCCCCC-CCCCCCcCcccccchHHHHHHHHHH
Confidence 67777644332211111111 111223467999998888888777755 4889999999999999999999999
Q ss_pred HcCCCHHHHHHhhcCCCCCcccccccCCCccccCCHHHHHHHHHhhcCchhHHHHHHHHhhcCCCcceeceecceEeecc
Q 000629 973 TLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEYTLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVT 1052 (1383)
Q Consensus 973 ~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~a~~~~g~~ 1052 (1383)
..+.||..+|+..-....+. .|+.......|..+..........++-+.+|+.+... |+..
T Consensus 524 l~~k~~~~aa~~l~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~ 584 (731)
T COG1529 524 LAEKDPVAAARMLGADAEDV------------------VLEDGAFKVGGGDRRSAVSLKEVAGKGLAPGLAVAAS-FGSD 584 (731)
T ss_pred HHHHHHHHHHhhhCCChhHe------------------eeccCeeeeccCCccceeeHHHhhhccccCccccccc-cccc
Confidence 99999999998872222111 2333333444532210000000001113455655432 2221
Q ss_pred ----CCCcceEEEEcC-CCcEEEE--eCCccCCcCh
Q 000629 1053 ----LRSTPGKVSILS-DGSVVVE--VGGIEMGQGL 1081 (1383)
Q Consensus 1053 ----~~~~~a~v~l~~-DGsv~v~--~g~~e~GQG~ 1081 (1383)
+...-+.|+|++ +|+|.|. ....|.|.=+
T Consensus 585 ~~~~~~A~~~EV~Vd~~tG~vrV~r~~~~~D~G~vv 620 (731)
T COG1529 585 NTYPYGAHIAEVEVDPETGEVRVLRVVAVDDCGRVV 620 (731)
T ss_pred ccccceeEEEEEEEECCCCcEEEEEEEEEEecCCcc
Confidence 334678999995 8976664 4556666543
No 34
>PRK12386 fumarate reductase iron-sulfur subunit; Provisional
Probab=98.98 E-value=3.8e-10 Score=126.68 Aligned_cols=69 Identities=17% Similarity=0.401 Sum_probs=64.2
Q ss_pred EEEEEccCCCCCcHHHHHhcccCC-----cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEE
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHTRF-----KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITT 95 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~~l-----~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 95 (1383)
+.++++ +++++|||++||+ ++. +++|.||.+|.||+|+|+| ||++++||++++.+++|.+++|
T Consensus 20 q~y~v~-~~~~~tvLd~L~~-i~~~~d~~l~~r~~C~~g~CGsCa~~I----------nG~p~laC~t~~~~~~~~~~it 87 (251)
T PRK12386 20 QDYTVE-VNEGEVVLDVIHR-LQATQAPDLAVRWNCKAGKCGSCSAEI----------NGRPRLMCMTRMSTFDEDETVT 87 (251)
T ss_pred EEEEEe-CCCCCCHHHHHHH-hccccCCCCcccCCCCCCcCCCCEEEE----------CccEeccHHhHHHHhCCCCeEE
Confidence 678886 7999999999998 788 5999999999999999999 8999999999999999999999
Q ss_pred ecccCC
Q 000629 96 SEGLGN 101 (1383)
Q Consensus 96 vEgl~~ 101 (1383)
||+|.+
T Consensus 88 iepl~~ 93 (251)
T PRK12386 88 VTPMRT 93 (251)
T ss_pred EccCCC
Confidence 999964
No 35
>PRK05950 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=98.42 E-value=2.5e-07 Score=104.00 Aligned_cols=69 Identities=20% Similarity=0.274 Sum_probs=60.6
Q ss_pred EEEEEccCC-CCCcHHHHHhccc----CCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEE
Q 000629 21 EKFEVSSVD-PSTTLLEFLRYHT----RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITT 95 (1383)
Q Consensus 21 ~~~~~~~~~-~~~~Ll~~LR~~~----~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 95 (1383)
+.++++ ++ +++|||++||+.- +..+.+.||.+|.||+|+|.| ||+++.||.+++..+ |.+++|
T Consensus 18 ~~~~v~-~~~~~~tvl~~L~~~~~~~~~~l~~~~~c~~g~Cg~C~v~v----------nG~~~laC~t~~~~~-~~~~~t 85 (232)
T PRK05950 18 QTYEVD-VDECGPMVLDALIKIKNEIDPTLTFRRSCREGVCGSDAMNI----------NGKNGLACITPISDL-KKGKIV 85 (232)
T ss_pred EEEEeC-CCCCCCHHHHHHHHhCCccCCcceeeCCCCCCCCCCCEEEE----------CCcCccchhChHhHc-CCCeEE
Confidence 456675 67 9999999999753 478899999999999999999 799999999999999 678999
Q ss_pred ecccCC
Q 000629 96 SEGLGN 101 (1383)
Q Consensus 96 vEgl~~ 101 (1383)
||+|.+
T Consensus 86 iepl~~ 91 (232)
T PRK05950 86 IRPLPG 91 (232)
T ss_pred EEECCC
Confidence 999974
No 36
>TIGR00384 dhsB succinate dehydrogenase and fumarate reductase iron-sulfur protein. Succinate dehydrogenase and fumarate reductase are reverse directions of the same enzymatic interconversion, succinate + FAD+ = fumarate + FADH2 (EC 1.3.11.1). In E. coli, the forward and reverse reactions are catalyzed by distinct complexes: fumarate reductase operates under anaerobic conditions and succinate dehydrogenase operates under aerobic conditions. This model also describes a region of the B subunit of a cytosolic archaeal fumarate reductase.
Probab=98.24 E-value=1.1e-06 Score=98.13 Aligned_cols=69 Identities=26% Similarity=0.483 Sum_probs=60.7
Q ss_pred EEEEEccCCCCCcHHHHHhccc----CCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHT----RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~----~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++++ +++++|||+.|++.- ...+.+.+|..|.||+|+|.| ||+++.||.+++..+ |.+++||
T Consensus 15 ~~~~v~-~~~~~tvl~~l~~i~~~~~~~l~~~~~C~~g~Cg~C~v~v----------nG~~~laC~t~v~~~-g~~~~~i 82 (220)
T TIGR00384 15 QSYEVP-ADEGMTVLDALNYIKDEQDPSLAFRRSCRNGICGSCAMNV----------NGKPVLACKTKVEDL-GQPVMKI 82 (220)
T ss_pred EEEEEe-CCCCCcHHHHHHHHHHhcCCCceeecccCCCCCCCCeeEE----------CCEEhhhhhChHHHc-CCCcEEE
Confidence 567776 689999999998622 567889999999999999999 789999999999988 9999999
Q ss_pred cccCC
Q 000629 97 EGLGN 101 (1383)
Q Consensus 97 Egl~~ 101 (1383)
|+|.+
T Consensus 83 epl~~ 87 (220)
T TIGR00384 83 EPLPN 87 (220)
T ss_pred eeCCC
Confidence 99964
No 37
>PRK12576 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=98.22 E-value=1.5e-06 Score=100.05 Aligned_cols=70 Identities=26% Similarity=0.354 Sum_probs=59.4
Q ss_pred EEEEEccCCCCCcHHHHHhc---ccCC-cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhc--CCceeE
Q 000629 21 EKFEVSSVDPSTTLLEFLRY---HTRF-KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV--NGCLIT 94 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~---~~~l-~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~--~g~~i~ 94 (1383)
+.++++ +++++|||++|+. +... -+.+.+|.+|.||+|+|.| ||+++.||.+++..+ ++.+++
T Consensus 25 ~~~~v~-~~~~~tvLd~L~~i~~~~d~tl~~~~~C~~G~CgsC~v~I----------NG~~~laC~t~v~~~~~~~~~~~ 93 (279)
T PRK12576 25 QEYKVK-VDRFTQVTEALRRIKEEQDPTLSYRASCHMAVCGSCGMKI----------NGEPRLACKTLVLDVAKKYNSVI 93 (279)
T ss_pred EEEEEe-cCCCCHHHHHHHHhCCccCCCceecCCCCCCCCCCCEEEE----------CCcEeccccCcHHHhhcCCCCcE
Confidence 557776 7999999999997 2322 3669999999999999999 799999999999998 467889
Q ss_pred EecccCC
Q 000629 95 TSEGLGN 101 (1383)
Q Consensus 95 TvEgl~~ 101 (1383)
|||+|.+
T Consensus 94 tiePl~~ 100 (279)
T PRK12576 94 TIEPMDY 100 (279)
T ss_pred EEEECCC
Confidence 9999974
No 38
>PF13510 Fer2_4: 2Fe-2S iron-sulfur cluster binding domain; PDB: 1Y56_A 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=97.91 E-value=2.3e-05 Score=73.61 Aligned_cols=69 Identities=26% Similarity=0.456 Sum_probs=48.4
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCc-----cc----ccCccCCCCCccEEEEeccCCCcCCCCcee-ecee
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK-----SV----KLGCGEGGCGACVVLLSKYNPELDQLEDFT-ISSC 81 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~-----gt----k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~-v~sC 81 (1383)
.+|+|+|||+++++. ++.||++.|+.. |+. .- +.-|..|.|+.|.|.+ ++++ +.||
T Consensus 2 ~~v~i~idG~~v~~~---~G~til~al~~~-gi~ip~~c~~~~~r~~~~~~g~C~~C~Vev----------~g~~~v~AC 67 (82)
T PF13510_consen 2 KMVTITIDGKPVEVP---PGETILEALLAA-GIDIPRLCYHGRPRGGLCPIGSCRLCLVEV----------DGEPNVRAC 67 (82)
T ss_dssp EEEEEEETTEEEEEE---ET-BHHHHHHHT-T--B-EETTTS-EEBSSSSSTT-SS-EEEE----------SSEEEEETT
T ss_pred CEEEEEECCEEEEEc---CCCHHHHHHHHC-CCeEEEeeeccCcccccCCccccceEEEEE----------CCCcceEcc
Confidence 479999999999885 699999999863 332 22 3447789999999999 5666 9999
Q ss_pred eccchhcCCceeEEe
Q 000629 82 LTLLCSVNGCLITTS 96 (1383)
Q Consensus 82 l~~~~~~~g~~i~Tv 96 (1383)
.+++. +|..|.|-
T Consensus 68 ~t~v~--~GM~V~T~ 80 (82)
T PF13510_consen 68 STPVE--DGMVVETQ 80 (82)
T ss_dssp T-B----TTEEEE--
T ss_pred cCCCc--CCcEEEEe
Confidence 99976 59999873
No 39
>cd00207 fer2 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.
Probab=97.71 E-value=4.6e-05 Score=71.46 Aligned_cols=69 Identities=28% Similarity=0.462 Sum_probs=53.2
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEeccCCC--------cCCCCceeeceeeccc
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSKYNPE--------LDQLEDFTISSCLTLL 85 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~--------~~~~~~~~v~sCl~~~ 85 (1383)
|+|..||+..+++ ++++++|+++|++ .|+. ...+|+.|.||+|.|.|.+-+.. ........+.+|...+
T Consensus 1 v~~~~~~~~~~~~-~~~g~~ll~al~~-~g~~-~~~~C~~g~Cg~C~v~v~~G~~~~~~~~~~~~~~~~~~~~LaC~~~~ 77 (84)
T cd00207 1 VTINVPGSGVEVE-VPEGETLLDAARE-AGID-IPYSCRAGACGTCKVEVVEGEVDQSDPSLLDEEEAEGGYVLACQTRV 77 (84)
T ss_pred CEEecCCCCEEEE-ECCCCcHHHHHHH-cCCC-cccCCCCcCCcCCEEEEeeCccccCcccCCCHHHHhCCeEEEEeCee
Confidence 4688887777776 6899999999997 6887 99999999999999999642211 1112355778999876
No 40
>PRK12385 fumarate reductase iron-sulfur subunit; Provisional
Probab=97.62 E-value=3.6e-05 Score=87.04 Aligned_cols=67 Identities=27% Similarity=0.500 Sum_probs=54.9
Q ss_pred EEEEEccCCCCCcHHHHH---hcccCCc-ccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDPSTTLLEFL---RYHTRFK-SVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~L---R~~~~l~-gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++++ +++++|||+.| ++++..+ +.+.+|.+|.||+|+|.| ||+++.+|.+++..+.+. +||
T Consensus 25 ~~~~v~-~~~~~tvl~~L~~ik~~~d~~l~fr~~C~~giCGsC~v~I----------nG~~~laC~t~~~~~~~~--~~i 91 (244)
T PRK12385 25 QTYEVP-YDETTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMV----------NNVPKLACKTFLRDYTGG--MKV 91 (244)
T ss_pred EEEEee-CCCCCcHHHHHHHHHHhcCCCceeccCCCCCcCCCCcceE----------CccChhhHhhHHHHcCCC--eEE
Confidence 566776 68999999999 5555454 678899999999999999 799999999999987432 678
Q ss_pred cccC
Q 000629 97 EGLG 100 (1383)
Q Consensus 97 Egl~ 100 (1383)
|=|.
T Consensus 92 ePl~ 95 (244)
T PRK12385 92 EALA 95 (244)
T ss_pred eeCC
Confidence 8774
No 41
>PF13085 Fer2_3: 2Fe-2S iron-sulfur cluster binding domain; PDB: 3P4Q_N 1KFY_N 3CIR_N 3P4R_B 2B76_N 1KF6_B 3P4P_N 3P4S_B 1L0V_B 1ZOY_B ....
Probab=97.62 E-value=0.00013 Score=71.95 Aligned_cols=70 Identities=27% Similarity=0.487 Sum_probs=54.0
Q ss_pred EEEEEccCCCCCcHHHHHhc---cc-CCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCc--eeE
Q 000629 21 EKFEVSSVDPSTTLLEFLRY---HT-RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGC--LIT 94 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~---~~-~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~--~i~ 94 (1383)
+.++++ +++.+|+|+.|.. ++ +=-....+|.+|.||+|.|.| ||+++.+|.+++-.+... ..+
T Consensus 19 ~~y~v~-~~~~~tVLd~L~~Ik~~~D~sLafr~sCr~giCGsCam~I----------NG~~~LAC~t~v~~~~~~~~~~i 87 (110)
T PF13085_consen 19 QEYEVP-VEPGMTVLDALNYIKEEQDPSLAFRYSCRSGICGSCAMRI----------NGRPRLACKTQVDDLIEKFGNVI 87 (110)
T ss_dssp EEEEEE-GGSTSBHHHHHHHHHHHT-TT--B--SSSSSSSSTTEEEE----------TTEEEEGGGSBGGGCTTSETBEE
T ss_pred EEEEec-CCCCCcHHHHHHHHHhccCCCeEEEecCCCCCCCCCEEEE----------CCceecceeeEchhccCCCcceE
Confidence 456776 5799999987753 32 234567999999999999999 899999999999999876 378
Q ss_pred EecccCC
Q 000629 95 TSEGLGN 101 (1383)
Q Consensus 95 TvEgl~~ 101 (1383)
|||=|.+
T Consensus 88 ~IePL~~ 94 (110)
T PF13085_consen 88 TIEPLPN 94 (110)
T ss_dssp EEEESTT
T ss_pred EEEECCC
Confidence 8998854
No 42
>PRK08493 NADH dehydrogenase subunit G; Validated
Probab=97.56 E-value=0.00011 Score=95.49 Aligned_cols=96 Identities=23% Similarity=0.355 Sum_probs=76.5
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccc----cCcc-CCCCCccEEEEeccCCCcCCCCceeeceeeccchhc
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVK----LGCG-EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV 88 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk----~gC~-~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~ 88 (1383)
|+|+|||+++++. +++|+|+.+|. .|+.-.. .+|. .|.|+.|.|.| +|+++.||.+|+.
T Consensus 2 v~i~IdG~~v~~~---~G~til~aa~~-~gi~iP~lC~~~~~~~~G~Cr~C~VeV----------~G~~~~AC~t~v~-- 65 (819)
T PRK08493 2 ITITINGKECEAQ---EGEYILNVARR-NGIFIPAICYLSGCSPTLACRLCMVEA----------DGKRVYSCNTKAK-- 65 (819)
T ss_pred eEEEECCEEEEeC---CCCHHHHHHHH-cCCccccccccCCCCCCccccceEEEE----------CCEEeccccCCCC--
Confidence 7899999998874 79999999996 4665432 4676 69999999999 6778999999984
Q ss_pred CCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChH
Q 000629 89 NGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPG 127 (1383)
Q Consensus 89 ~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG 127 (1383)
+|..|.|-..-- ...-+.+++.+...|-.+|+.|..+
T Consensus 66 dGM~V~T~s~~v--~~~Rk~vle~ll~~HpldC~~Cd~~ 102 (819)
T PRK08493 66 EGMNILTNTPNL--MDERNAIMQTYDVNHPLECGVCDKS 102 (819)
T ss_pred CCCEEEecCHHH--HHHHHHHHHHHHhccCCCCCcCCCC
Confidence 899999942110 1234678889999999999999864
No 43
>PF00111 Fer2: 2Fe-2S iron-sulfur cluster binding domain; InterPro: IPR001041 The ferredoxin protein family are electron carrier proteins with an iron-sulphur cofactor that act in a wide variety of metabolic reactions. Ferredoxins can be divided into several subgroups depending upon the physiological nature of the iron-sulphur cluster(s) and according to sequence similarities. This entry represents members of the 2Fe-2S ferredoxin family that have a general core structure consisting of beta(2)-alpha-beta(2), which includes putidaredoxin and terpredoxin, and adrenodoxin [, , , ]. They are proteins of around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This conserved region is also found as a domain in various metabolic enzymes and in multidomain proteins, such as aldehyde oxidoreductase (N-terminal), xanthine oxidase (N-terminal), phthalate dioxygenase reductase (C-terminal), succinate dehydrogenase iron-sulphur protein (N-terminal), and methane monooxygenase reductase (N-terminal).; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding; PDB: 3M9S_C 2FUG_L 3IAS_L 2YBB_3 3IAM_3 3I9V_3 1JQ4_A 1DOX_A 1DOY_A 2KAJ_A ....
Probab=97.28 E-value=0.0003 Score=65.20 Aligned_cols=47 Identities=36% Similarity=0.696 Sum_probs=41.5
Q ss_pred EEECCEEEEEccCCCCCc-HHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 16 FAVNGEKFEVSSVDPSTT-LLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 16 ~~~Ng~~~~~~~~~~~~~-Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
+++||+.++++ +.++.+ |+++|++ .+-.+...+|+.|.||.|.|.|.
T Consensus 1 i~i~g~~~~~~-~~~~~~~ll~~~~~-~~gi~i~~~C~~g~Cg~C~v~v~ 48 (78)
T PF00111_consen 1 ITINGKGVTVE-VPPGETLLLDALER-AGGIGIPYSCGGGGCGTCRVRVL 48 (78)
T ss_dssp EETTTEEEEEE-EETTSBBHHHHHHH-TTTTTSTTSSSSSSSSTTEEEEE
T ss_pred CEECCeEEEEE-eCCCccHHHHHHHH-cCCCCcccCCCCCccCCcEEEEe
Confidence 47899999997 688888 9999996 45788999999999999999985
No 44
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=97.13 E-value=0.00071 Score=87.56 Aligned_cols=92 Identities=23% Similarity=0.485 Sum_probs=65.4
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCc------cCCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGC------GEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC------~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
+|+|+|||+++++. +++||++.|+.. |+.-. ..| ..|.|+.|.|.++ | ..+.+.||++++.
T Consensus 3 ~v~~~idg~~~~~~---~g~ti~~a~~~~-g~~ip-~~c~~~~~~~~g~C~~C~V~v~------g--~~~~~~aC~t~~~ 69 (652)
T PRK12814 3 TISLTINGRSVTAA---PGTSILEAAASA-GITIP-TLCFHQELEATGSCWMCIVEIK------G--KNRFVPACSTAVS 69 (652)
T ss_pred eEEEEECCEEEEeC---CcCcHHHHHHHc-CCccc-cccCCCCCCCccccceeEEEEC------C--CcceecCcCCCCC
Confidence 68999999988874 799999999864 65422 344 4799999999993 1 1235899999984
Q ss_pred hcCCceeEEecccCCCCCCcchHHHHHHhcCCCC-CCCCC
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQ-CGFCT 125 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~q-CG~Ct 125 (1383)
+|..|.| + ...+..+|+...+.-.++ |++|.
T Consensus 70 --~Gm~v~t-----~-~~~~~~~r~~~le~l~~~~c~~C~ 101 (652)
T PRK12814 70 --EGMVIET-----E-NAELHAMRRQSLERLIEQHCGDCL 101 (652)
T ss_pred --CCCEEEe-----C-cHHHHHHHHHHHHHHHhhcccccC
Confidence 7999999 2 335666774433332222 77775
No 45
>PRK12577 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=97.05 E-value=0.0036 Score=74.18 Aligned_cols=70 Identities=21% Similarity=0.421 Sum_probs=54.1
Q ss_pred EEEEEccCCCCCcHHHHHhccc-CCcc---cccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchh-cC------
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHT-RFKS---VKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS-VN------ 89 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~-~l~g---tk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~-~~------ 89 (1383)
+.++++ +++++|+|+.|+..- .+.+ -..+|..|.||+|.|.| +|+++.||.+++.. ++
T Consensus 19 ~~~~v~-~~~~~tvL~~l~~i~~~~d~tL~~~~~c~~~~Cg~C~v~i----------nG~~~laC~t~v~~~~~~~~~~~ 87 (329)
T PRK12577 19 QTYTLE-VEPGNTILDCLNRIKWEQDGSLAFRKNCRNTICGSCAMRI----------NGRSALACKENVGSELARLSDSN 87 (329)
T ss_pred EEEEEE-CCCCChHHHHHHHhCCcCCCCcEEcCCCCCCCCCCCEEEE----------CCeeecCcccchhhhhccccccc
Confidence 557776 789999999998631 2323 45789999999999999 79999999999875 22
Q ss_pred --CceeEEecccCC
Q 000629 90 --GCLITTSEGLGN 101 (1383)
Q Consensus 90 --g~~i~TvEgl~~ 101 (1383)
+...+|||=|++
T Consensus 88 ~~~~~~i~iePl~~ 101 (329)
T PRK12577 88 SGAIPEITIAPLGN 101 (329)
T ss_pred cCCCCeEEEEECCC
Confidence 235678998864
No 46
>PRK08640 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=96.93 E-value=0.0011 Score=75.40 Aligned_cols=68 Identities=21% Similarity=0.386 Sum_probs=54.1
Q ss_pred EEEEEccCCCCCcHHHHHhccc----CC-------cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcC
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHT----RF-------KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVN 89 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~----~l-------~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 89 (1383)
+.++++ +++++|+|+.|..-- .+ -....+|.+|.||+|.|.| ||++..+|.+.+-.+.
T Consensus 23 q~y~v~-~~~~~tvLdaL~~I~~~~~~~~g~~~~~l~fr~sCr~giCGsCam~I----------NG~p~LAC~t~v~~~~ 91 (249)
T PRK08640 23 EEFEIP-YRPNMNVISALMEIRRNPVNAKGEKTTPVVWDMNCLEEVCGACSMVI----------NGKPRQACTALIDQLE 91 (249)
T ss_pred EEEEec-CCCCCcHHHHHHHHHhcccccccccCCCeeEecccCCCCCCcCeeEE----------CCccchhhhChHHHcC
Confidence 567886 689999999886321 12 3457899999999999999 8999999999998773
Q ss_pred CceeEEecccCC
Q 000629 90 GCLITTSEGLGN 101 (1383)
Q Consensus 90 g~~i~TvEgl~~ 101 (1383)
..+|||=|.+
T Consensus 92 --~~i~iePl~~ 101 (249)
T PRK08640 92 --QPIRLEPMST 101 (249)
T ss_pred --CcEEEEECCC
Confidence 3478998853
No 47
>PRK07569 bidirectional hydrogenase complex protein HoxU; Validated
Probab=96.88 E-value=0.0027 Score=71.76 Aligned_cols=96 Identities=17% Similarity=0.310 Sum_probs=69.6
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCc-----ccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchh
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK-----SVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS 87 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~-----gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 87 (1383)
+|+|+|||+.+++ .+++|||+.++.. |+. ..+.-|..|.||.|.|.|+ | ..+.+.||.+++.
T Consensus 3 ~v~i~idg~~~~~---~~g~til~a~~~~-gi~ip~~C~~~~~~~~G~C~~C~V~v~------g--~~~~~~aC~t~v~- 69 (234)
T PRK07569 3 VKTLTIDDQLVSA---REGETLLEAAREA-GIPIPTLCHLDGLSDVGACRLCLVEIE------G--SNKLLPACVTPVA- 69 (234)
T ss_pred eEEEEECCEEEEe---CCCCHHHHHHHHc-CCCCCcCcCCCCCCCCCccCCcEEEEC------C--CCccccCcCCCCC-
Confidence 5899999999766 4799999999853 433 2223344999999999993 1 1245789999976
Q ss_pred cCCceeEEecccCCCCCCcc----hHHHHHHhcCCCCCCCCChHH
Q 000629 88 VNGCLITTSEGLGNSKTGFH----PIHQRFAGFHASQCGFCTPGM 128 (1383)
Q Consensus 88 ~~g~~i~TvEgl~~~~~~~h----~iq~a~~~~~~~qCG~CtpG~ 128 (1383)
+|..|.|- ..++. -+.+.+...|-.-|.-|..+-
T Consensus 70 -~Gm~v~t~------~~~~~~~rk~~l~~ll~~h~~~C~~C~~~g 107 (234)
T PRK07569 70 -EGMVVQTN------TPRLQEYRRMIVELLFAEGNHVCAVCVANG 107 (234)
T ss_pred -CCCEEEEC------CHHHHHHHHHHHHHHHHhccccCcccCCCC
Confidence 69999983 12232 355567788999999998654
No 48
>PRK06259 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Provisional
Probab=96.88 E-value=0.002 Score=80.74 Aligned_cols=64 Identities=28% Similarity=0.589 Sum_probs=50.5
Q ss_pred EEEEEccCCCCCcHHHHHhcccCCcc----cccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHTRFKS----VKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~~l~g----tk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++++ +++++|||+.|++..+.+. .+.+|..|.||+|+|.+ +|+++.+|.+++. +|..|.+.
T Consensus 21 ~~~~v~-~~~~~tvl~al~~~~~~~~~~l~~~~~C~~g~Cg~C~v~v----------~G~~~laC~~~~~--~~~~i~~~ 87 (486)
T PRK06259 21 ESYEVP-VKEGMTVLDALEYINKTYDANIAFRSSCRAGQCGSCAVTI----------NGEPVLACKTEVE--DGMIIEPL 87 (486)
T ss_pred EEEEEe-CCCCChHHHHHHHhchhcCCCceecCCCCCCCCCCCEEEE----------CCeEecccccCCC--CCCEEEec
Confidence 456665 7899999999996433222 37899999999999998 6888999999985 57777776
Q ss_pred c
Q 000629 97 E 97 (1383)
Q Consensus 97 E 97 (1383)
.
T Consensus 88 ~ 88 (486)
T PRK06259 88 D 88 (486)
T ss_pred C
Confidence 4
No 49
>PRK13552 frdB fumarate reductase iron-sulfur subunit; Provisional
Probab=96.83 E-value=0.001 Score=75.19 Aligned_cols=69 Identities=20% Similarity=0.329 Sum_probs=55.4
Q ss_pred EEEEEccCCCCCcHHHHHhccc-CC---cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDPSTTLLEFLRYHT-RF---KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~~-~l---~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++++ +++++|+|+.|+.-- .+ -+...+|.+|.||+|.|.| ||+++.+|.+.+-.+.+. .+||
T Consensus 24 ~~y~v~-~~~~~tvLdaL~~Ik~~~D~sL~fr~sCr~giCGsCam~I----------NG~~~LAC~t~v~~~~~~-~i~i 91 (239)
T PRK13552 24 VTYQLE-ETPGMTLFIALNRIREEQDPSLQFDFVCRAGICGSCAMVI----------NGRPTLACRTLTSDYPDG-VITL 91 (239)
T ss_pred EEEEec-CCCCCCHHHHHHHHHhcCCCCeeEeccCCCCCCCCceeEE----------CCeEhhhhhccHhhcCCC-cEEE
Confidence 557886 689999999886521 22 3457999999999999999 899999999999887422 5789
Q ss_pred cccCC
Q 000629 97 EGLGN 101 (1383)
Q Consensus 97 Egl~~ 101 (1383)
|=|.+
T Consensus 92 ePl~~ 96 (239)
T PRK13552 92 MPLPV 96 (239)
T ss_pred EECCC
Confidence 98854
No 50
>PRK07570 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated
Probab=96.69 E-value=0.0019 Score=73.31 Aligned_cols=70 Identities=24% Similarity=0.433 Sum_probs=55.7
Q ss_pred EEEEEccCCCCCcHHHHHhc---cc-----CCcccccCccCCCCCccEEEEeccCCCcCCCCcee------eceeeccch
Q 000629 21 EKFEVSSVDPSTTLLEFLRY---HT-----RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFT------ISSCLTLLC 86 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~---~~-----~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~------v~sCl~~~~ 86 (1383)
+.++++.+++++|+|+.|.. ++ .=-+...+|.+|.||+|.|+| ||++ ..+|.+.+.
T Consensus 20 q~y~v~~~~~~~tvLd~L~~Ik~~~~~~~~~~l~fr~sCr~~iCGsCam~I----------NG~p~~~~~~~LAC~t~~~ 89 (250)
T PRK07570 20 ETYEVDDISPDMSFLEMLDVLNEQLIEKGEEPVAFDHDCREGICGMCGLVI----------NGRPHGPDRGTTTCQLHMR 89 (250)
T ss_pred EEEEecCCCCCCcHHHHHHHHHHHhhccCCCCeeEeccccCCcCCcceeEE----------CCccCCCCcccchhhhhhh
Confidence 56777635799999998863 11 115678999999999999999 8999 899999988
Q ss_pred hcCCceeEEecccC
Q 000629 87 SVNGCLITTSEGLG 100 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~ 100 (1383)
.+.+...+|||=|.
T Consensus 90 ~~~~~~~i~iePl~ 103 (250)
T PRK07570 90 SFKDGDTITIEPWR 103 (250)
T ss_pred hcCCCCeEEEEECC
Confidence 87654568899884
No 51
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.61 E-value=0.0057 Score=71.61 Aligned_cols=161 Identities=14% Similarity=0.114 Sum_probs=101.4
Q ss_pred eeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccc
Q 000629 235 MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATV 313 (1383)
Q Consensus 235 ~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~v 313 (1383)
+.+.+ ...|+.|.|.+|+.++++-... ..-...++.|||.+.+-.. ..+.++|++++. +..|..+++.+++||++
T Consensus 30 ~~igg~a~~~v~p~~~edl~~~v~~a~~-~~ip~~vlGgGSNllv~d~-g~~gvVI~l~~~--~~~i~~~~~~v~v~AG~ 105 (302)
T PRK14652 30 VRVGGPADLLVRPADPDALSALLRAVRE-LGVPLSILGGGANTLVADA-GVRGVVLRLPQD--FPGESTDGGRLVLGAGA 105 (302)
T ss_pred eecCCcceEEEEcCCHHHHHHHHHHHHH-CCCcEEEEcCCcceeecCC-CEeeEEEEecCC--cceEEecCCEEEEECCC
Confidence 44555 5678899999999988763211 2346788999999865332 234688998763 55666777899999999
Q ss_pred cHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCce
Q 000629 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKC 393 (1383)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~ 393 (1383)
++.+|.+.+.++- +. -+...++.+ ||+||.+++-... +-.++.=.+. .|++...+|.
T Consensus 106 ~~~~L~~~~~~~G----------L~----GlE~l~gIP----GTvGGav~mNaGa-~ggei~d~v~----~v~vv~~~G~ 162 (302)
T PRK14652 106 PISRLPARAHAHG----------LV----GMEFLAGIP----GTLGGAVAMNAGT-KLGEMKDVVT----AVELATADGA 162 (302)
T ss_pred cHHHHHHHHHHcC----------Cc----ccccccCCC----cchhHHHHHcCCC-CceEhhheEE----EEEEECCCCc
Confidence 9999999866541 11 123333332 6999998766541 0122222222 4555666676
Q ss_pred EEEehhh-hcc--CCCCCCCceEEEEEcCCCC
Q 000629 394 EKLMLEE-FLE--RPPLDSRSILLSVEIPCWD 422 (1383)
Q Consensus 394 R~v~l~d-F~~--~~~L~~~eil~~I~IP~~~ 422 (1383)
++++-+| +|. ...++.+-||+++.+.+.+
T Consensus 163 ~~~~~~e~~f~YR~s~~~~~~II~~a~~~L~~ 194 (302)
T PRK14652 163 GFVPAAALGYAYRTCRLPPGAVITRVEVRLRP 194 (302)
T ss_pred EEeehhhcCcccceeccCCCeEEEEEEEEEec
Confidence 6777776 443 2233345688887776543
No 52
>COG0479 FrdB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion]
Probab=96.38 E-value=0.0046 Score=68.89 Aligned_cols=69 Identities=30% Similarity=0.493 Sum_probs=56.6
Q ss_pred EEEEEccCCCCCcHHHHHhcc---c-CCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDPSTTLLEFLRYH---T-RFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~~~~Ll~~LR~~---~-~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++|+ .++++++||.|..- . .=-.....|.+|.||+|.+.| ||++..+|...+..+... ++||
T Consensus 20 ~~yev~-~~~~~~vLdaL~~Ik~e~d~~Lsfr~sCR~gICGSCam~I----------NG~prLAC~t~~~~~~~~-~i~i 87 (234)
T COG0479 20 QTYEVP-YDEGMTVLDALLYIKEEQDPTLSFRRSCREGICGSCAMNI----------NGKPRLACKTLMKDLEEG-VITI 87 (234)
T ss_pred EEEEec-CCCCCcHHHHHHHHHHhcCCccchhhhccCCcCCcceeEE----------CCccccchhchhhhccCC-ceEE
Confidence 457776 68999999977542 1 233567899999999999999 899999999999998766 8899
Q ss_pred cccCC
Q 000629 97 EGLGN 101 (1383)
Q Consensus 97 Egl~~ 101 (1383)
|=|.+
T Consensus 88 ePL~~ 92 (234)
T COG0479 88 EPLPN 92 (234)
T ss_pred EECCC
Confidence 98864
No 53
>PRK12575 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=96.27 E-value=0.0059 Score=68.79 Aligned_cols=68 Identities=21% Similarity=0.301 Sum_probs=52.4
Q ss_pred EEEEEccCCC-CCcHHHHHhcccCC---cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 21 EKFEVSSVDP-STTLLEFLRYHTRF---KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 21 ~~~~~~~~~~-~~~Ll~~LR~~~~l---~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
+.++++ +++ ++|+||.|..--.. -....+|.+|.||+|.|+| ||+++.+|.+.+-.+.+ -+||
T Consensus 23 ~~y~v~-~~~~~~tvld~L~~ik~~d~~l~fr~sCr~giCGsCa~~i----------NG~~~LaC~t~~~~~~~--~i~i 89 (235)
T PRK12575 23 QRYEIA-PRAEDRMLLDVLGRVKAQDETLSYRRSCREGICGSDAMNI----------NGRNGLACLTNMQALPR--EIVL 89 (235)
T ss_pred EEEEec-CCCCCCcHHHHHHHHHhcCCCeeeeccCCCCCCCCCeeEE----------CCeEcchhhCcHhHcCC--CEEE
Confidence 456775 444 67999988753222 2357899999999999999 89999999999998743 3789
Q ss_pred cccCC
Q 000629 97 EGLGN 101 (1383)
Q Consensus 97 Egl~~ 101 (1383)
|=|.+
T Consensus 90 ePl~~ 94 (235)
T PRK12575 90 RPLPG 94 (235)
T ss_pred eECCC
Confidence 98853
No 54
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage. One of the enzymes Vanillyl-alcohol oxidase (VAO, 1.1.3.38 from EC) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110 []. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyses the oxidation of a wide variety of substrates, ranging from aromatic amines to 4-alkylphenols. ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZR6_A 3HSU_A 2AXR_A 3D2J_A 3D2H_A 3FW9_A 3FW8_A 3FW7_A 3GSY_A 3FWA_A ....
Probab=96.22 E-value=0.0072 Score=62.29 Aligned_cols=106 Identities=18% Similarity=0.220 Sum_probs=74.2
Q ss_pred eEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~ 321 (1383)
.+++|+|.+|+.++++.... ..-..++.+||+++.-... .....+||++++.....+..++..++++|++++.+|.+.
T Consensus 3 ~vv~P~s~~ev~~~v~~a~~-~~~~v~~~g~G~~~~~~~~-~~~~ivi~~~~l~~i~~id~~~~~v~v~aG~~~~~l~~~ 80 (139)
T PF01565_consen 3 AVVRPKSVEEVQAIVKFANE-NGVPVRVRGGGHSWTGQSS-DEGGIVIDMSRLNKIIEIDPENGTVTVGAGVTWGDLYEA 80 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHH-TTSEEEEESSSTTSSSTTS-STTEEEEECTTCGCEEEEETTTTEEEEETTSBHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHH-cCCcEEEEcCCCCcccccc-cCCcEEEeeccccccccccccceeEEEeccccchhcccc
Confidence 47899999999998874321 2456788888888862111 356789999986665555566789999999999999998
Q ss_pred HHHHhhhhchhhhhhHHHHHHHHHHhc-ccccccccccCCccccccC
Q 000629 322 LKEETKEFHSEALMVFKKIAGHMEKIA-SRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~ia-s~qIRN~aTiGGNI~~asp 367 (1383)
|...-. .+. .+.--.-+|+||.|++..-
T Consensus 81 l~~~g~------------------~~~~~~~~~~~~tvGG~i~~~~~ 109 (139)
T PF01565_consen 81 LAPRGL------------------MLPVEPGSGIPGTVGGAIAGNGH 109 (139)
T ss_dssp HHHHTE------------------EESSGGGSTTTSBHHHHHHTT-E
T ss_pred cccccc------------------cccccccccccceEchhhcCCCc
Confidence 754410 111 1233456799999988654
No 55
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.06 E-value=0.044 Score=63.98 Aligned_cols=158 Identities=16% Similarity=0.149 Sum_probs=97.5
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEccc
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGAT 312 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~ 312 (1383)
.+.+.+ ...|+.|+|.+|+.++++-.. +.-...++.|||.+.+-.. ..+.++|.+++ |+.|+.+++.+++||+
T Consensus 27 t~~iGG~A~~~v~p~s~eel~~~~~~~~--~~~p~~vlG~GSNlLv~d~-g~~gvVI~l~~---~~~i~i~~~~v~v~AG 100 (297)
T PRK14653 27 SFKIGGPVPLFAIPNSTNGFIETINLLK--EGIEVKILGNGTNVLPKDE-PMDFVVVSTER---LDDIFVDNDKIICESG 100 (297)
T ss_pred EeeeCcEEEEEEecCCHHHHHHHHHHHh--cCCCEEEEcCCeeEEEecC-CccEEEEEeCC---cCceEEeCCEEEEeCC
Confidence 355666 667899999999999886331 1345778899998876443 23467888755 5667777789999999
Q ss_pred ccHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc
Q 000629 313 VTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK 392 (1383)
Q Consensus 313 vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g 392 (1383)
+++.+|...+.+.- +. -+..+++. =|||||++++-... +-.++.=.+. +|++.+.+.
T Consensus 101 ~~l~~L~~~~~~~G----------L~----GlE~l~gI----PGTVGGAv~mNAGa-yG~ei~d~l~----~V~~~d~g~ 157 (297)
T PRK14653 101 LSLKKLCLVAAKNG----------LS----GFENAYGI----PGSVGGAVYMNAGA-YGWETAENIV----EVVAYDGKK 157 (297)
T ss_pred CcHHHHHHHHHHCC----------Cc----chhhhcCC----chhHHHHHHHhCcc-CchhhheeEE----EEEEECCCE
Confidence 99999998755431 11 12223333 47899998765543 2233333333 666666323
Q ss_pred eEEEehhh-hcc--CCCCCC--CceEEEEEcCC
Q 000629 393 CEKLMLEE-FLE--RPPLDS--RSILLSVEIPC 420 (1383)
Q Consensus 393 ~R~v~l~d-F~~--~~~L~~--~eil~~I~IP~ 420 (1383)
.++++-+| -|. ...++. +-||+++.+.+
T Consensus 158 v~~~~~~e~~f~YR~S~~~~~~~~iI~~a~f~L 190 (297)
T PRK14653 158 IIRLGKNEIKFSYRNSIFKEEKDLIILRVTFKL 190 (297)
T ss_pred EEEEchhhccccCccccCCCCCcEEEEEEEEEE
Confidence 56666666 221 222322 22666655544
No 56
>PLN00129 succinate dehydrogenase [ubiquinone] iron-sulfur subunit
Probab=96.05 E-value=0.0071 Score=69.35 Aligned_cols=69 Identities=22% Similarity=0.378 Sum_probs=52.3
Q ss_pred EEEEEccCCC-CCcHHHHHhccc-CC---cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEE
Q 000629 21 EKFEVSSVDP-STTLLEFLRYHT-RF---KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITT 95 (1383)
Q Consensus 21 ~~~~~~~~~~-~~~Ll~~LR~~~-~l---~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 95 (1383)
+.++++ +.+ ++|+||.|+.-- .+ -....+|.+|.||+|.|.| ||+++.+|.+.+-.+.+ ..+|
T Consensus 62 ~~y~v~-~~~~~~tVLd~L~~Ik~~~D~sLsfr~sCr~giCGsCam~I----------NG~p~LAC~t~v~~~~~-~~i~ 129 (276)
T PLN00129 62 QSYKVD-LNDCGPMVLDVLIKIKNEQDPSLTFRRSCREGICGSCAMNI----------DGKNTLACLTKIDRDES-GPTT 129 (276)
T ss_pred EEEEeC-CCCCCchHHHHHHHHHHcCCCCeEEeccCCCCCCCCCeeEE----------CCcccccccccHhhcCC-CcEE
Confidence 345665 454 799999886521 22 3467899999999999999 89999999999987643 3467
Q ss_pred ecccCC
Q 000629 96 SEGLGN 101 (1383)
Q Consensus 96 vEgl~~ 101 (1383)
||=|.+
T Consensus 130 iePl~~ 135 (276)
T PLN00129 130 ITPLPH 135 (276)
T ss_pred EEECCC
Confidence 998853
No 57
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=95.76 E-value=0.043 Score=64.33 Aligned_cols=161 Identities=19% Similarity=0.232 Sum_probs=98.7
Q ss_pred eeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccc
Q 000629 235 MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATV 313 (1383)
Q Consensus 235 ~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~v 313 (1383)
+.+.+ ...++.|+|.+|+.++++.... ..-...++.|||.+.+ .+......+||+++ .|+.|+.+++.+++||++
T Consensus 25 ~~igg~a~~vv~P~s~edv~~~v~~a~~-~~~p~~v~GgGsnll~-~d~g~~gvvI~l~~--~l~~i~~~~~~v~v~aG~ 100 (298)
T PRK13905 25 FRVGGPADYLVEPADIEDLQEFLKLLKE-NNIPVTVLGNGSNLLV-RDGGIRGVVIRLGK--GLNEIEVEGNRITAGAGA 100 (298)
T ss_pred eecCceEeEEEeCCCHHHHHHHHHHHHH-cCCCEEEEeCCceEEe-cCCCcceEEEEecC--CcceEEecCCEEEEECCC
Confidence 44445 5567999999999998764321 1346888999998754 22223478999874 467777778899999999
Q ss_pred cHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc-
Q 000629 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK- 392 (1383)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g- 392 (1383)
++.+|.+.+.+.- +. .+...++. -+||||.+++-... +..++.-.+ -.|++...+|
T Consensus 101 ~~~~L~~~l~~~G----------l~----gle~~~gi----pGTVGGai~~NaG~-~G~~~~d~v----~~v~vv~~~G~ 157 (298)
T PRK13905 101 PLIKLARFAAEAG----------LS----GLEFAAGI----PGTVGGAVFMNAGA-YGGETADVL----ESVEVLDRDGE 157 (298)
T ss_pred cHHHHHHHHHHcC----------CC----cchhccCC----CcchhHHHHHcCCc-CceEhheeE----EEEEEEeCCCC
Confidence 9999999876541 10 12223333 27899998753321 111111111 1344455555
Q ss_pred eEEEehhh-hcc--CCCCC-CCceEEEEEcCCCC
Q 000629 393 CEKLMLEE-FLE--RPPLD-SRSILLSVEIPCWD 422 (1383)
Q Consensus 393 ~R~v~l~d-F~~--~~~L~-~~eil~~I~IP~~~ 422 (1383)
.++++-+| ||. ...+. ...||+++.+...+
T Consensus 158 ~~~~~~~e~~~~yR~s~~~~~~gII~~~~l~l~~ 191 (298)
T PRK13905 158 IKTLSNEELGFGYRHSALQEEGLIVLSATFQLEP 191 (298)
T ss_pred EEEEEHHHcCCcCccccCCCCCEEEEEEEEEEcC
Confidence 56677777 443 22333 24589988776544
No 58
>PRK10713 2Fe-2S ferredoxin YfaE; Provisional
Probab=95.46 E-value=0.026 Score=53.30 Aligned_cols=47 Identities=32% Similarity=0.622 Sum_probs=38.3
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEE
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~ 63 (1383)
.|.|.-+|+.+.+. +.+.+||+.|++. |+ ...++|..|.||+|.+-+
T Consensus 3 ~v~~~~~~~~~~~~--~~~~tlL~a~~~~-gi-~~p~~Cr~G~Cg~C~~~~ 49 (84)
T PRK10713 3 RVTLRITGTQLLCQ--DEHPSLLAALESH-NV-AVEYQCREGYCGSCRTRL 49 (84)
T ss_pred EEEEEeCCcEEEec--CCCCcHHHHHHHc-CC-CCCCCCCCeECCCCEeEE
Confidence 46777778776664 3569999999864 76 789999999999999988
No 59
>PTZ00305 NADH:ubiquinone oxidoreductase; Provisional
Probab=95.27 E-value=0.056 Score=61.83 Aligned_cols=102 Identities=21% Similarity=0.286 Sum_probs=70.1
Q ss_pred CCCcccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccc----cCc-cCCCCCccEEEEeccCCCcCCCCceeecee
Q 000629 7 HGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVK----LGC-GEGGCGACVVLLSKYNPELDQLEDFTISSC 81 (1383)
Q Consensus 7 ~~~~~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk----~gC-~~G~CGaCtV~~~~~~~~~~~~~~~~v~sC 81 (1383)
-++-+-++.++|||+.+++. ++++|||+..|+. |+.=.. .+. ..|.|.-|.|.|. | ..+.+.||
T Consensus 62 ~~~~~~~~~I~IDGk~VeV~--~~G~TILeAAr~~-GI~IPtLCy~~~L~p~G~CRlClVEVe------G--~~~lv~AC 130 (297)
T PTZ00305 62 YAEHKPRAIMFVNKRPVEII--PQEENLLEVLERE-GIRVPKFCYHPILSVAGNCRMCLVQVD------G--TQNLVVSC 130 (297)
T ss_pred hhccCCceEEEECCEEEEec--CCCChHHHHHHHc-CCCcCccccCCCCCCCCccceeEEEEC------C--CcCccccc
Confidence 34555678999999999883 5799999999864 432111 122 3789999999993 1 23589999
Q ss_pred eccchhcCCceeEEecccCCCCCCcch----HHHHHHhcCCCCCCCCChH
Q 000629 82 LTLLCSVNGCLITTSEGLGNSKTGFHP----IHQRFAGFHASQCGFCTPG 127 (1383)
Q Consensus 82 l~~~~~~~g~~i~TvEgl~~~~~~~h~----iq~a~~~~~~~qCG~CtpG 127 (1383)
.+|+. +|..|.|- ...+.. +.+-|...|-.-|.-|.-+
T Consensus 131 ~tpV~--eGM~V~T~------Se~v~~~Rk~vLElLLs~Hp~DC~~C~k~ 172 (297)
T PTZ00305 131 ATVAL--PGMSIITD------SRLVRDAREGNVELILINHPNDCPICEQA 172 (297)
T ss_pred CCcCC--CCCEEEeC------CHHHHHHHHHHHHHHHhcCCCcCCcccCc
Confidence 99986 69999982 223333 3444566677777777643
No 60
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion]
Probab=95.22 E-value=0.038 Score=68.56 Aligned_cols=108 Identities=18% Similarity=0.148 Sum_probs=78.9
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
..+..|+|.+|+.++++.... .+-.....+|||++.--..-. ..++||++++..+..|..++..+++.|++++.+|.+
T Consensus 33 ~~v~~p~s~~eV~~iv~~a~~-~~~~v~prG~gts~~g~~~~~-~gvvl~l~~mn~i~~id~~~~~~~v~aGv~l~~l~~ 110 (459)
T COG0277 33 LAVVFPKSEEEVAAILRLANE-NGIPVVPRGGGTSLSGGAVPD-GGVVLDLSRLNRILEIDPEDGTATVQAGVTLEDLEK 110 (459)
T ss_pred CEEEccCCHHHHHHHHHHHHH-cCCeEEEECCCCCccccccCC-CcEEEEchhhcchhccCcCCCEEEEcCCccHHHHHH
Confidence 367899999999998874311 122367789999986521101 278999999766666667788999999999999999
Q ss_pred HHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000629 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (1383)
.|+.+--. + =..++.++.+||||||++.+.
T Consensus 111 ~l~~~G~~--------~---------p~~p~s~~~~tIGG~ia~~~~ 140 (459)
T COG0277 111 ALAPHGLF--------L---------PVDPSSSGTATIGGNIATNAG 140 (459)
T ss_pred HHHHcCCc--------c---------CCCccccccceEccchhcCCC
Confidence 87764111 1 125677799999999998875
No 61
>PRK07860 NADH dehydrogenase subunit G; Validated
Probab=95.08 E-value=0.035 Score=73.70 Aligned_cols=103 Identities=20% Similarity=0.321 Sum_probs=75.4
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcc----cCCcccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchh
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYH----TRFKSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS 87 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~----~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 87 (1383)
.+|+|+|||+++++. +++||++..+.. ..|...+..+.-|.|.-|.|.|+ | ..+.+.||.+|+.
T Consensus 3 ~~v~~~idg~~~~~~---~g~til~aa~~~gi~ip~~C~~~~l~~~g~Cr~C~Vev~------g--~~~~~~aC~t~v~- 70 (797)
T PRK07860 3 DLVTLTIDGVEVSVP---KGTLVIRAAELLGIQIPRFCDHPLLDPVGACRQCLVEVE------G--QRKPQASCTTTVT- 70 (797)
T ss_pred ceEEEEECCEEEEeC---CCChHHHHHHHcCCCCCeecCCCCCCCCcccCccEEEEC------C--CcccccccCCCCC-
Confidence 368999999998884 799999998752 23555566667999999999993 1 1246889999976
Q ss_pred cCCceeEEe---cccCCCCCCcchHHHHHHhcCCCCCCCCChHHHH
Q 000629 88 VNGCLITTS---EGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCM 130 (1383)
Q Consensus 88 ~~g~~i~Tv---Egl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm 130 (1383)
+|..|.|- |=+. ..-+-+.+-+...|--.|..|.-+-=+
T Consensus 71 -~gm~V~t~~~s~~v~---~~r~~~le~ll~~hp~dC~~C~~~g~C 112 (797)
T PRK07860 71 -DGMVVKTQLTSPVAD---KAQHGVMELLLINHPLDCPVCDKGGEC 112 (797)
T ss_pred -CCcEEEeCCCCHHHH---HHHHHHHHHHHhcCCCCCCCCCCCCCc
Confidence 69999983 2221 112345666778899999999876433
No 62
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.89 E-value=0.23 Score=58.08 Aligned_cols=161 Identities=12% Similarity=0.165 Sum_probs=96.7
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEccc
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGAT 312 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~ 312 (1383)
.+.+.+ ...|+.|.|.+|+.++++.... +.-...++.||+-+.+-........+|-+.+ ++.|+..++.|++||+
T Consensus 26 t~~iGG~A~~~~~p~~~~eL~~~l~~~~~-~~~p~~vlG~GSNlLv~D~g~~~g~vi~~~~---~~~i~~~~~~v~a~AG 101 (302)
T PRK14650 26 TYKIGGISKLFLTPKTIKDAEHIFKAAIE-EKIKIFILGGGSNILINDEEEIDFPIIYTGH---LNKIEIHDNQIVAECG 101 (302)
T ss_pred eeeeCcEEEEEEecCCHHHHHHHHHHHHH-cCCCEEEEeceeEEEEECCCccceEEEEECC---cCcEEEeCCEEEEEeC
Confidence 456666 6788999999999988864321 1345778888887766444224456676543 6777777789999999
Q ss_pred ccHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc
Q 000629 313 VTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK 392 (1383)
Q Consensus 313 vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g 392 (1383)
+++.+|.....+.. +. -+..+++.+ |||||-+++--.. +-.++.=+|. +|++.+.+|
T Consensus 102 ~~~~~l~~~~~~~g----------l~----GlE~l~gIP----GTVGGAv~mNAGa-yG~ei~d~l~----sV~~~d~~g 158 (302)
T PRK14650 102 TNFEDLCKFALQNE----------LS----GLEFIYGLP----GTLGGAIWMNARC-FGNEISEILD----KITFIDEKG 158 (302)
T ss_pred CcHHHHHHHHHHcC----------Cc----hhhhhcCCC----cchhHHHHhhCCc-cccchheeEE----EEEEEECCC
Confidence 99999988744330 11 122233332 6788876544331 1122222221 455555444
Q ss_pred -eEEEehhhh-c--cCCCCCC-CceEEEEEcCCC
Q 000629 393 -CEKLMLEEF-L--ERPPLDS-RSILLSVEIPCW 421 (1383)
Q Consensus 393 -~R~v~l~dF-~--~~~~L~~-~eil~~I~IP~~ 421 (1383)
.++++-+|. | +...++. +.||+++.+.+.
T Consensus 159 ~~~~~~~~e~~f~YR~S~f~~~~~iIl~a~f~L~ 192 (302)
T PRK14650 159 KTICKKFKKEEFKYKISPFQNKNTFILKATLNLK 192 (302)
T ss_pred CEEEEEHHHcCcccccccCCCCCEEEEEEEEEEc
Confidence 677777773 3 2344444 457777766554
No 63
>TIGR02008 fdx_plant ferredoxin [2Fe-2S]. This model represents single domain 2Fe-2S (also called plant type) ferredoxins. In general, these occur as a single domain proteins or with a chloroplast transit peptide. Species tend to be photosynthetic, but several forms may occur in one species and individually may not be associated with photocynthesis. Halobacterial forms differ somewhat in architecture; they score between trusted and noise cutoffs. Sequences scoring below the noise cutoff tend to be ferredoxin-related domains of larger proteins.
Probab=94.85 E-value=0.049 Score=52.94 Aligned_cols=49 Identities=14% Similarity=0.367 Sum_probs=37.9
Q ss_pred EEEE-EECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 13 SVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 13 ~i~~-~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
+|.| +=+|+..+++ ++++.+||+.|++ .|+ ....+|+.|.||.|.|-+-
T Consensus 4 ~v~~~~~~~~~~~~~-~~~g~tLLda~~~-~Gi-~i~~~C~~G~Cg~C~v~v~ 53 (97)
T TIGR02008 4 KVTLVNPDGGEETIE-CPDDQYILDAAEE-AGI-DLPYSCRAGACSTCAGKVE 53 (97)
T ss_pred EEEEEECCCCEEEEE-ECCCCcHHHHHHH-cCC-CCCcCCCCccCCCCceEEE
Confidence 3444 2377556665 5799999999985 476 4789999999999999993
No 64
>CHL00134 petF ferredoxin; Validated
Probab=94.80 E-value=0.054 Score=52.86 Aligned_cols=48 Identities=15% Similarity=0.380 Sum_probs=39.2
Q ss_pred EEEEEE--CCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEE
Q 000629 13 SVVFAV--NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63 (1383)
Q Consensus 13 ~i~~~~--Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~ 63 (1383)
.|.|.. +|..+.++ ++++.+||+.|++. |+ ....+|+.|.||.|.|-+
T Consensus 5 ~v~~~~~~~~~~~~~~-~~~~~tLL~a~~~~-Gi-~i~~~C~~G~Cg~C~v~v 54 (99)
T CHL00134 5 KVTLLSEEEGIDVTID-CPDDVYILDAAEEQ-GI-DLPYSCRAGACSTCAGKV 54 (99)
T ss_pred EEEEEecCCCCeEEEE-ECCCCcHHHHHHHc-CC-CCCcCCCCccCCCCEEEE
Confidence 344444 77777776 68999999999864 75 788899999999999998
No 65
>TIGR01676 GLDHase galactonolactone dehydrogenase. This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.
Probab=94.69 E-value=0.055 Score=67.67 Aligned_cols=106 Identities=10% Similarity=0.259 Sum_probs=75.0
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
..+++|+|.+|+.++++.... .+-..+.++||++..-.-. ....+||++++..+-.|..+...++++|++++.+|.+
T Consensus 63 ~~~~~P~s~eEV~~iV~~A~~-~g~~Vr~~GsGhS~sg~a~--t~g~lldL~~ln~Vl~vD~~~~tVtV~AG~~l~~L~~ 139 (541)
T TIGR01676 63 RTFHQPEAIEELEGIVKQANE-KKARIRPVGSGLSPNGIGL--SRAGMVNLALMDKVLEVDEEKKRVRVQAGIRVQQLVD 139 (541)
T ss_pred ceEECCCCHHHHHHHHHHHHH-cCCcEEEECCCcCCCCccc--CCCeEEEhhhCCCCEEEcCCCCEEEEcCCCCHHHHHH
Confidence 568999999999999875421 1346888999988643111 1235899998877766777778999999999999999
Q ss_pred HHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000629 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (1383)
.|.++- . .+.+..--+..||||+|+++.-
T Consensus 140 ~L~~~G--------l----------al~n~gsi~~~TIGGaiatgtH 168 (541)
T TIGR01676 140 AIKEYG--------I----------TLQNFASIREQQIGGIIQVGAH 168 (541)
T ss_pred HHHHcC--------C----------EeccCCCCCCceEccccccCCc
Confidence 876541 0 1112222355789999998743
No 66
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase. This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan.
Probab=94.65 E-value=0.21 Score=58.15 Aligned_cols=158 Identities=15% Similarity=0.209 Sum_probs=94.4
Q ss_pred eecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEccccc
Q 000629 236 LLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVT 314 (1383)
Q Consensus 236 ~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vT 314 (1383)
.+.+ ...|+.|.|.+|+.++++-... ..-...++.|||.+.+... ....++|++++.... +..+++.+++||+++
T Consensus 8 ~igg~a~~~v~p~s~edl~~~l~~a~~-~~~p~~vlGgGSNll~~d~-~~~gvvi~l~~~~~~--~~~~~~~v~v~aG~~ 83 (284)
T TIGR00179 8 KIGGNARHIVCPESIEQLVNVLDNAKE-EDQPLLILGEGSNLLILDD-GRGGVIINLGKGIDI--EDDEGEYVHVGGGEN 83 (284)
T ss_pred ecCceeeEEEEeCCHHHHHHHHHHHHH-cCCCEEEEecceEEEEccC-CcCeEEEECCCCceE--EEecCCEEEEEcCCc
Confidence 3444 5678999999999988763211 2346889999999876433 334688998764322 233356899999999
Q ss_pred HHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc-e
Q 000629 315 ISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-C 393 (1383)
Q Consensus 315 l~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g-~ 393 (1383)
+.+|.+.+.+.- +. -+..+++.+ |||||++++-... |-.++.=.| . .|++...+| .
T Consensus 84 ~~~l~~~~~~~G----------l~----GlE~l~giP----GtvGGai~mNAGa-yG~~i~d~l--~--~v~vv~~~G~~ 140 (284)
T TIGR00179 84 WHKLVKYALKNG----------LS----GLEFLAGIP----GTVGGAVIMNAGA-YGVEISEVL--V--YATILLATGKT 140 (284)
T ss_pred HHHHHHHHHHCC----------Cc----ccccCCCCC----chHHHHHHHhccc-chhehhheE--E--EEEEEeCCCCE
Confidence 999998865431 10 122233322 5899998775553 112111111 1 344445556 5
Q ss_pred EEEehhh-hc--cCCCCCCC--ceEEEEEcCC
Q 000629 394 EKLMLEE-FL--ERPPLDSR--SILLSVEIPC 420 (1383)
Q Consensus 394 R~v~l~d-F~--~~~~L~~~--eil~~I~IP~ 420 (1383)
++++-+| .| +...++.+ .|+++..+.+
T Consensus 141 ~~~~~~~~~f~YR~S~f~~~~~~iil~a~~~l 172 (284)
T TIGR00179 141 EWLTNEQLGFGYRTSIFQHKYVGLVLKAEFQL 172 (284)
T ss_pred EEEEHHHccccCCccccCCCCcEEEEEEEEEe
Confidence 7788777 33 23445443 3666655543
No 67
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=94.59 E-value=0.061 Score=67.53 Aligned_cols=106 Identities=10% Similarity=0.042 Sum_probs=72.4
Q ss_pred eEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~ 321 (1383)
..++|.|.+|+.++++-... .+-...+.+|||++.--..-.....+||++++..+..|..++..++++|++++.+|.+.
T Consensus 58 ~Vv~P~s~eeV~~iv~~a~~-~~ipv~~rG~Gt~~~gg~~~~~~gividl~~ln~I~~id~~~~~v~VeaGv~~~~L~~~ 136 (499)
T PRK11230 58 LVVLPKQMEQVQALLAVCHR-LRVPVVARGAGTGLSGGALPLEKGVLLVMARFNRILDINPVGRRARVQPGVRNLAISQA 136 (499)
T ss_pred EEEeeCCHHHHHHHHHHHHH-cCCeEEEECCCcCcCCCcccCCCcEEEEcccCCCceEEcCCCCEEEEcCCccHHHHHHH
Confidence 46789999999988773211 12345677899987321000124689999997665556666788999999999999998
Q ss_pred HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccc
Q 000629 322 LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMA 365 (1383)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~a 365 (1383)
|.++-- .+ -..++-...+||||||++.
T Consensus 137 l~~~Gl--------~~---------~~~p~s~~~~tvGG~ia~n 163 (499)
T PRK11230 137 AAPHGL--------YY---------APDPSSQIACSIGGNVAEN 163 (499)
T ss_pred HHHcCC--------ee---------CCCCCccccceEcceeccC
Confidence 776510 01 1234445679999999875
No 68
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.57 E-value=0.19 Score=59.12 Aligned_cols=154 Identities=15% Similarity=0.181 Sum_probs=94.5
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHH
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (1383)
Q Consensus 240 ~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~ 319 (1383)
...|+.|.|.+|+.++++-... ..-...++.|||.+.+-.. .....+|++++ |+.|+.+++.+++||++++.+|.
T Consensus 37 A~~~v~p~~~edv~~~v~~a~~-~~ip~~vlGgGSNll~~d~-g~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~l~ 111 (307)
T PRK13906 37 ADFYITPTKNEEVQAVVKYAYQ-NEIPVTYLGNGSNIIIREG-GIRGIVISLLS---LDHIEVSDDAIIAGSGAAIIDVS 111 (307)
T ss_pred eEEEEEcCCHHHHHHHHHHHHH-cCCCEEEEcCceeEeecCC-CcceEEEEecC---ccceEEeCCEEEEECCCcHHHHH
Confidence 4578999999999988763211 1345788999998865332 23468899866 67777778899999999999999
Q ss_pred HHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc-eEEEeh
Q 000629 320 EALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-CEKLML 398 (1383)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g-~R~v~l 398 (1383)
+.+.+.- +. -+...++. -|||||++++-... +-.++.=.|+ .|++...+| .++++-
T Consensus 112 ~~~~~~G----------l~----GlE~~~gI----PGtVGGav~mNaGa-yGg~i~D~l~----~v~vv~~~G~~~~~~~ 168 (307)
T PRK13906 112 RVARDYA----------LT----GLEFACGI----PGSIGGAVYMNAGA-YGGEVKDCID----YALCVNEQGSLIKLTT 168 (307)
T ss_pred HHHHHcC----------Cc----cchhhcCC----CccHhHHHHhhCCc-chhhhhhhee----EEEEEeCCCCEEEEEH
Confidence 8755441 11 11111222 36899998766553 1112222221 344444445 567777
Q ss_pred hh-hcc--CCCCCC-CceEEEEEcCCC
Q 000629 399 EE-FLE--RPPLDS-RSILLSVEIPCW 421 (1383)
Q Consensus 399 ~d-F~~--~~~L~~-~eil~~I~IP~~ 421 (1383)
+| .|. ...++. +.||+++.+-+.
T Consensus 169 ~e~~f~YR~S~~~~~~~ii~~~~~~l~ 195 (307)
T PRK13906 169 KELELDYRNSIIQKEHLVVLEAAFTLA 195 (307)
T ss_pred HHccCcCCcccCCCCCEEEEEEEEEEC
Confidence 77 332 334443 336766655543
No 69
>PRK11183 D-lactate dehydrogenase; Provisional
Probab=94.36 E-value=0.077 Score=65.69 Aligned_cols=110 Identities=19% Similarity=0.106 Sum_probs=72.0
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceE--eee---cccCceEEecCCCccccceeecCCcEEEcccccH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKE---VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTI 315 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v--~k~---~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl 315 (1383)
.-.++|.|.+|..++++--.. .+-....-+|||+|.= ... ..+..++||+.++..+..|. ++..+++.++||+
T Consensus 40 ~AVV~P~SteEVa~IVklC~e-~~vPVIPRGgGTGLtGGAvP~~~~~dR~gVVIsl~RMNrIleID-~~~~VvVePGVtl 117 (564)
T PRK11183 40 LAVVFPGTLLELWRVLQACVA-ADKIIIMQAANTGLTGGSTPNGNDYDRDIVIISTLRLDKIQLLN-NGKQVLALPGTTL 117 (564)
T ss_pred CEEEecCCHHHHHHHHHHHHH-cCCeEEEeCCCcccccCcccCCCCCcCCEEEEEhhHcCCcEEEC-CCCeEEEeCCCcH
Confidence 356899999999988773210 1233455689998832 221 12346899998876666666 4568999999999
Q ss_pred HHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCC
Q 000629 316 SKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK 368 (1383)
Q Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~ 368 (1383)
.+|.+.|+..-- +|.. .++|.+|- +||||||++.+.-
T Consensus 118 ~~LeeaLk~~Gl---------~p~s-----d~GSS~IG--asIGGnIAtNAGG 154 (564)
T PRK11183 118 YQLEKALKPLGR---------EPHS-----VIGSSCIG--ASVIGGICNNSGG 154 (564)
T ss_pred HHHHHHHHHhCC---------CCCC-----cccccccC--CCCccceEECCcc
Confidence 999998876521 1110 02333332 4999999987763
No 70
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=94.07 E-value=0.39 Score=60.77 Aligned_cols=158 Identities=15% Similarity=0.274 Sum_probs=91.1
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
..+++|+|.+|+.++++.... .+...+++++|.+..-.- .....+||++++..+-.|..+...++++|++++.+|.+
T Consensus 98 ~~vv~P~S~eEV~~iV~~A~~-~g~~VrvvGsGhS~~~l~--~td~glIdL~~l~~Il~vD~e~~~VtV~AG~~l~~L~~ 174 (573)
T PLN02465 98 RRYHQPESLEELEDIVKEAHE-KGRRIRPVGSGLSPNGLA--FSREGMVNLALMDKVLEVDKEKKRVTVQAGARVQQVVE 174 (573)
T ss_pred CEEEEeCCHHHHHHHHHHHHH-cCCcEEEEcCCcCCCCee--eCCCEEEECcCCCCcEEEeCCCCEEEEccCCCHHHHHH
Confidence 468999999999999875321 234688888887542211 11235789988655444455557899999999999999
Q ss_pred HHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCch-HHHHHhcCcEEEEEeCC-ceEEEeh
Q 000629 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDV-ATVLLGAGAMVNIMTGQ-KCEKLML 398 (1383)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl-~~~LlaldA~v~i~~~~-g~R~v~l 398 (1383)
.|.++- | ++...++ | +..||||.|.++.-- +.. ...+-..=-.++|...+ +..++.-
T Consensus 175 ~L~~~G-------------L--al~n~g~--I-~~~TIGGaIstGtHG---tG~~~g~i~d~V~~l~lVta~G~vv~~s~ 233 (573)
T PLN02465 175 ALRPHG-------------L--TLQNYAS--I-REQQIGGFIQVGAHG---TGARIPPIDEQVVSMKLVTPAKGTIELSK 233 (573)
T ss_pred HHHHcC-------------C--EeccCCC--C-CCeeecchhhCCCCC---cCCCcCcHhheEEEEEEEECCCCEEEECC
Confidence 877641 0 0111222 1 357999999765432 110 01111111123444433 3445543
Q ss_pred h---hhcc--CCCCCCCceEEEEEcCCCC
Q 000629 399 E---EFLE--RPPLDSRSILLSVEIPCWD 422 (1383)
Q Consensus 399 ~---dF~~--~~~L~~~eil~~I~IP~~~ 422 (1383)
+ |.|. ...+..--||+++.|-..+
T Consensus 234 ~~~pdLF~aar~glG~lGVIteVTLql~P 262 (573)
T PLN02465 234 EDDPELFRLARCGLGGLGVVAEVTLQCVP 262 (573)
T ss_pred CCCHHHHhHhhccCCCCcEEEEEEEEEEe
Confidence 3 3342 3334444599998887644
No 71
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=94.04 E-value=0.06 Score=66.15 Aligned_cols=103 Identities=14% Similarity=0.164 Sum_probs=69.7
Q ss_pred EecCCHHHHHHHHhhhcCCCCCceeEEccCccceE--eeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH
Q 000629 244 HSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1383)
Q Consensus 244 ~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v--~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~ 321 (1383)
++|.|.+|+.++++.... .+-...+.+|||++.- .. ....++||++++.....|..++..++++|++++.+|.+.
T Consensus 2 v~P~s~eev~~iv~~a~~-~~i~v~~~G~Gt~~~g~~~~--~~~~vvidl~~mn~i~~id~~~~~v~veaGv~~~~l~~~ 78 (413)
T TIGR00387 2 VFPKNTEQVARILKLCHE-HRIPIVPRGAGTGLSGGALP--EEGGLVLVFKHMNKILEIDVVNLTAVVQPGVRNLELEQA 78 (413)
T ss_pred CCCCCHHHHHHHHHHHHH-cCCcEEEECCCCCCCCCccC--CCCeEEEEhHHcCceeEEcCCCCEEEEcCCccHHHHHHH
Confidence 469999999988773211 1345788899998741 11 124678898775544444455679999999999999998
Q ss_pred HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCcccccc
Q 000629 322 LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQ 366 (1383)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~as 366 (1383)
|.++- ..+| -.++-...+|+||+|++..
T Consensus 79 l~~~g--------l~~~---------~~p~s~~~~tiGG~ia~na 106 (413)
T TIGR00387 79 VEEHN--------LFYP---------PDPSSQISSTIGGNIAENA 106 (413)
T ss_pred HHHcC--------CeeC---------CCCcccccceehhhhhcCC
Confidence 77651 0111 1344456799999998744
No 72
>TIGR01973 NuoG NADH-quinone oxidoreductase, chain G. This model represents the G subunit (one of 14: A-N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria while translocating protons, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This model excludes related subunits from formate dehydrogenase complexes.
Probab=93.87 E-value=0.1 Score=67.21 Aligned_cols=93 Identities=25% Similarity=0.436 Sum_probs=67.6
Q ss_pred EEECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc------CCCCCccEEEEeccCCCcCCCCceeeceeeccchhcC
Q 000629 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG------EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVN 89 (1383)
Q Consensus 16 ~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 89 (1383)
|+|||+++++. +++||++.+++ .|.. +-.=|. .|.|.-|.|.+.. + ..+.+.||.+|+. +
T Consensus 1 ~~idg~~~~~~---~g~~il~a~~~-~gi~-ip~~C~~~~l~~~g~Cr~C~v~v~g------~-~~~~~~aC~~~~~--~ 66 (603)
T TIGR01973 1 IFIDGKELEVP---KGTTVLQACLS-AGIE-IPRFCYHEKLSIAGNCRMCLVEVEK------F-PDKPVASCATPVT--D 66 (603)
T ss_pred CEECCEEEEeC---CCCHHHHHHHH-cCCC-ccccCCCCCCCCCCccccCEEEECC------C-CCCcccccCCCCC--C
Confidence 58999998885 78999999986 3543 224565 8999999999931 1 0127999999976 6
Q ss_pred CceeEEecccCCCCCCcch----HHHHHHhcCCCCCCCCChHH
Q 000629 90 GCLITTSEGLGNSKTGFHP----IHQRFAGFHASQCGFCTPGM 128 (1383)
Q Consensus 90 g~~i~TvEgl~~~~~~~h~----iq~a~~~~~~~qCG~CtpG~ 128 (1383)
|..|.|- ....+. +.+.+...|-.-|..|.-+-
T Consensus 67 gm~v~t~------~~~~~~~r~~~~e~ll~~h~~dC~~C~~~g 103 (603)
T TIGR01973 67 GMKISTN------SEKVKKAREGVMEFLLINHPLDCPICDQGG 103 (603)
T ss_pred CCEEEeC------CHHHHHHHHHHHHHHHhcCCCCCCcCCCCC
Confidence 9999982 223333 44556677888899998763
No 73
>PRK09130 NADH dehydrogenase subunit G; Validated
Probab=93.87 E-value=0.13 Score=67.16 Aligned_cols=94 Identities=23% Similarity=0.353 Sum_probs=65.4
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc------CCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG------EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
+|+++|||+++++. +++|+|+..|. .|.. +-.=|- .|.|.-|.|.+... ..+++.||.+|+.
T Consensus 1 m~~~~Idg~~v~v~---~g~til~a~~~-~gi~-IP~lCy~~~l~~~g~Cr~ClVev~~~-------~~~~~~sC~~~v~ 68 (687)
T PRK09130 1 MVKLKVDGKEIEVP---DGYTLLQACEA-AGAE-IPRFCYHERLSIAGNCRMCLVEVKGG-------PPKPVASCAMPVG 68 (687)
T ss_pred CeEEEECCEEEEeC---CCCHHHHHHHH-cCCC-cCcccCCCCCCCCCCCCCCEEEECCC-------CCCcccccCCCCC
Confidence 47899999988874 79999999985 4654 333464 79999999999310 1368999999976
Q ss_pred hcCCceeEEecccCCCCCCcchHH----HHHHhcCCCCCCCCCh
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIH----QRFAGFHASQCGFCTP 126 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq----~a~~~~~~~qCG~Ctp 126 (1383)
+|..|.| + .......+ +-+...|-.-|..|.-
T Consensus 69 --~gm~v~T-----~-s~~v~~~r~~~le~ll~~Hp~dC~~C~~ 104 (687)
T PRK09130 69 --EGMVIFT-----N-TPMVKKAREGVMEFLLINHPLDCPICDQ 104 (687)
T ss_pred --CCCEEEe-----C-CHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 6999998 2 22333333 3345555555666653
No 74
>PRK09129 NADH dehydrogenase subunit G; Validated
Probab=93.80 E-value=0.076 Score=70.54 Aligned_cols=106 Identities=19% Similarity=0.283 Sum_probs=73.6
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc------CCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG------EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
+|+|+|||+++++. +++||++.++. .|..-. .=|. .|.|.-|.|.++. ..+.+.||.+|+.
T Consensus 1 m~~~~idg~~~~~~---~g~~il~a~~~-~g~~ip-~~c~~~~~~~~~~C~~C~v~v~~--------~~~~~~aC~~~~~ 67 (776)
T PRK09129 1 MVEIEIDGKKVEVP---EGSMVIEAADK-AGIYIP-RFCYHKKLSIAANCRMCLVEVEK--------APKPLPACATPVT 67 (776)
T ss_pred CeEEEECCEEEEeC---CCCHHHHHHHH-cCCCCC-cccCCCCCCCCCCcceeEEEECC--------CCCcCcccCCCCC
Confidence 48899999999884 79999999986 343221 1344 5899999999931 1245899999987
Q ss_pred hcCCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHHHHHHHHH
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSA 135 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~l 135 (1383)
+|..|.|-.--- ...-.-+-+.+...|--.|..|.-+--+-+-.+
T Consensus 68 --~gm~v~t~~~~~--~~~r~~~l~~ll~~h~~~C~~c~~~g~C~Lq~~ 112 (776)
T PRK09129 68 --DGMKVFTRSEKA--LKAQKSVMEFLLINHPLDCPICDQGGECQLQDL 112 (776)
T ss_pred --CCCEEEcCCHHH--HHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHH
Confidence 699999821100 011233555677889999999998775544443
No 75
>PLN02593 adrenodoxin-like ferredoxin protein
Probab=93.79 E-value=0.15 Score=51.25 Aligned_cols=81 Identities=21% Similarity=0.356 Sum_probs=56.1
Q ss_pred EEEE-EECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc-CCCCCccEEEEe-cc--CC------------C-cCCCC
Q 000629 13 SVVF-AVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLS-KY--NP------------E-LDQLE 74 (1383)
Q Consensus 13 ~i~~-~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~-~G~CGaCtV~~~-~~--~~------------~-~~~~~ 74 (1383)
+|+| ..+|+..+++ +.++++|++.+++. |+. ....|+ .|.||.|-|.|. .. +. . .....
T Consensus 2 ~V~fi~~~G~~~~v~-~~~G~tLl~a~~~~-gi~-i~~~CgG~g~C~tC~V~V~~~~~~~~l~~~~~~E~~~L~~~~~~~ 78 (117)
T PLN02593 2 SVTFVDKDGEERTVK-APVGMSLLEAAHEN-DIE-LEGACEGSLACSTCHVIVMDEKVYNKLPEPTDEENDMLDLAFGLT 78 (117)
T ss_pred EEEEEcCCCCEEEEE-ECCCCcHHHHHHHc-CCC-CCccCCCcceeCCCEEEEecCccccCCCCCChHHHHHHhcccCCC
Confidence 5777 4789888887 68999999999864 774 777999 599999999992 11 00 0 11122
Q ss_pred ceeeceeeccchh-cCCceeEEe
Q 000629 75 DFTISSCLTLLCS-VNGCLITTS 96 (1383)
Q Consensus 75 ~~~v~sCl~~~~~-~~g~~i~Tv 96 (1383)
.-...||.+.+.. ++|..|..-
T Consensus 79 ~~sRLaCQ~~v~~~~~~~~v~ip 101 (117)
T PLN02593 79 ETSRLGCQVIAKPELDGMRLALP 101 (117)
T ss_pred CCeEecceeEeecCCCCEEEEcC
Confidence 3345899987653 467666653
No 76
>PLN03136 Ferredoxin; Provisional
Probab=93.75 E-value=0.1 Score=54.51 Aligned_cols=49 Identities=18% Similarity=0.366 Sum_probs=37.8
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
+|.|..++...+++ ++++.+|||.+++. |+ ...++|+.|.||.|.+-+-
T Consensus 56 ~V~l~~~~~~~~~~-~~~g~tILdAa~~~-Gi-~lp~sCr~G~CGtC~~~l~ 104 (148)
T PLN03136 56 KVKFITPEGEQEVE-CEEDVYVLDAAEEA-GI-DLPYSCRAGSCSSCAGKVV 104 (148)
T ss_pred EEEEecCCCcEEEE-eCCCCcHHHHHHHc-CC-CCCcCCCCccCCCCEEEEe
Confidence 45554455445665 67899999999864 74 4889999999999999883
No 77
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1.
Probab=93.67 E-value=0.16 Score=62.87 Aligned_cols=82 Identities=20% Similarity=0.263 Sum_probs=58.6
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
...++|+|.+|+.++++.... .+-..++++||++..-.- .....+||++++..+..|..+...++++|++++.+|.+
T Consensus 16 ~~v~~P~s~eev~~iv~~A~~-~~~~v~v~G~GhS~s~~~--~~~gvvIdl~~l~~i~~id~~~~~vtV~aG~~l~~L~~ 92 (438)
T TIGR01678 16 EVYYQPTSVEEVREVLALARE-QKKKVKVVGGGHSPSDIA--CTDGFLIHLDKMNKVLQFDKEKKQITVEAGIRLYQLHE 92 (438)
T ss_pred CEEEecCCHHHHHHHHHHHHH-CCCeEEEECCCCCCCCCc--cCCeEEEEhhhcCCceEEcCCCCEEEEcCCCCHHHHHH
Confidence 357899999999998874321 134578888986643210 12358999988655544555556899999999999999
Q ss_pred HHHHH
Q 000629 321 ALKEE 325 (1383)
Q Consensus 321 ~l~~~ 325 (1383)
.|.+.
T Consensus 93 ~L~~~ 97 (438)
T TIGR01678 93 QLDEH 97 (438)
T ss_pred HHHHc
Confidence 87654
No 78
>PTZ00490 Ferredoxin superfamily; Provisional
Probab=93.31 E-value=0.16 Score=52.72 Aligned_cols=85 Identities=20% Similarity=0.259 Sum_probs=57.7
Q ss_pred cEEEEEE-CCEEEEEccCCCCCcHHHHHhcccCCcccccCcc-CCCCCccEEEEecc-----CC---------CcC-CCC
Q 000629 12 HSVVFAV-NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSKY-----NP---------ELD-QLE 74 (1383)
Q Consensus 12 ~~i~~~~-Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~-~G~CGaCtV~~~~~-----~~---------~~~-~~~ 74 (1383)
.+|+|+= ||++++++ +.+..+|++.|++. +.-+.-.-|+ .|.||-|.|.|.+- .+ ... ...
T Consensus 36 v~I~~~~~dG~~~~v~-~~~G~sLLeal~~~-~~i~i~~~CGG~g~CgtC~V~V~~g~~~~l~~~~~~E~~~L~~~~~~~ 113 (143)
T PTZ00490 36 VKVCVKKRDGTHCDVE-VPVGMSLMHALRDV-AKLDVEGTCNGCMQCATCHVYLSAASFKKLGGPSEEEEDVLAKALDVK 113 (143)
T ss_pred EEEEEEcCCCCEEEEE-ECCCccHHHHHHHc-CCCCccccCCCCCEeCCCEEEECCCccccCCCCChHHHHHhhccccCC
Confidence 3444432 37888887 79999999999974 3345556788 99999999999551 00 001 223
Q ss_pred ceeeceeeccchh-cCCceeEEecc
Q 000629 75 DFTISSCLTLLCS-VNGCLITTSEG 98 (1383)
Q Consensus 75 ~~~v~sCl~~~~~-~~g~~i~TvEg 98 (1383)
.-...||.+.+.. ++|..|..-|-
T Consensus 114 ~gsRLaCQi~v~~~ldgl~V~vp~~ 138 (143)
T PTZ00490 114 ETSRLACQVDLTPEMDGLEVELPSY 138 (143)
T ss_pred CCcEEeeeEEEecCCCCEEEEeCcc
Confidence 3445999998865 67878776543
No 79
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=93.31 E-value=0.1 Score=66.06 Aligned_cols=106 Identities=14% Similarity=0.131 Sum_probs=72.6
Q ss_pred eEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~ 321 (1383)
..++|+|.+|+.++++.... ..-...+.+|||++.-.--......+||++++..+..|..++..++++|++++.+|.+.
T Consensus 136 ~Vv~P~s~eeV~~ivk~a~~-~~ipv~prGgGts~~G~~~~~~ggivIdl~~mn~I~~id~~~~~vtVeaGv~~~~L~~~ 214 (555)
T PLN02805 136 VVVFPRSEEEVSKIVKSCNK-YKVPIVPYGGATSIEGHTLAPHGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELNEY 214 (555)
T ss_pred EEEEcCCHHHHHHHHHHHHH-CCCcEEEECCCCCCCCCccCCCCEEEEEccCCCCeEEEeCCCCEEEEeCCcCHHHHHHH
Confidence 46789999999988763211 13456788999988421000123689999987766666677789999999999999998
Q ss_pred HHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000629 322 LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 322 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (1383)
|.++- ..+|.. +. ..+||||+|++...
T Consensus 215 L~~~G--------l~~p~~---------p~--~~~TIGG~ia~n~~ 241 (555)
T PLN02805 215 LEPYG--------LFFPLD---------PG--PGATIGGMCATRCS 241 (555)
T ss_pred HHHcC--------CEeCCC---------Cc--cccChhhHhhCCCc
Confidence 87651 112211 11 34799999987743
No 80
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=93.26 E-value=0.51 Score=59.92 Aligned_cols=84 Identities=10% Similarity=0.111 Sum_probs=55.9
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEcc-CccceEe-eecccC-ceEEecCCCccccceeecCCcEEEcccccHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAG-NTGMGYY-KEVEHY-DKYIDIRYIPELSVIRRDQTGIEIGATVTISK 317 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaG-gT~l~v~-k~~~~~-~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~ 317 (1383)
...++|+|.+|+.++++.... .+-..++++| |.++.-. ...... .++||++++..+-.|..+...++++|++++.+
T Consensus 33 ~~vv~P~s~eeV~~iV~~A~~-~g~~v~v~GG~gHs~~~~a~t~~~~ggvvIdL~~Ln~il~iD~~~~tVtV~AG~~l~~ 111 (557)
T TIGR01677 33 ANVAYPKTEAELVSVVAAATA-AGRKMKVVTRYSHSIPKLACPDGSDGALLISTKRLNHVVAVDATAMTVTVESGMSLRE 111 (557)
T ss_pred CEEEecCCHHHHHHHHHHHHH-CCCeEEEEeCCCCCcCcccccCCCCCEEEEEcccCCCCEEEeCCCCEEEECCCCcHHH
Confidence 357899999999999875421 1234566654 3333211 110112 38999998665555556667899999999999
Q ss_pred HHHHHHHH
Q 000629 318 AIEALKEE 325 (1383)
Q Consensus 318 l~~~l~~~ 325 (1383)
|.+.|.+.
T Consensus 112 L~~~L~~~ 119 (557)
T TIGR01677 112 LIVEAEKA 119 (557)
T ss_pred HHHHHHHc
Confidence 99987764
No 81
>PRK11872 antC anthranilate dioxygenase reductase; Provisional
Probab=93.21 E-value=0.11 Score=62.05 Aligned_cols=47 Identities=26% Similarity=0.434 Sum_probs=39.6
Q ss_pred EEEEE---CCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEE
Q 000629 14 VVFAV---NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63 (1383)
Q Consensus 14 i~~~~---Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~ 63 (1383)
.+++| ||+.+.++ +.++.|||+.|++. |+ ....+|++|.||.|.|-+
T Consensus 3 ~~v~~~~~~~~~~~~~-~~~g~tlL~a~~~~-g~-~~p~~C~~G~Cg~C~~~~ 52 (340)
T PRK11872 3 HKVALSFADGKTLFFP-VGKDELLLDAALRN-GI-NLPLDCREGVCGTCQGRC 52 (340)
T ss_pred eEEEEEecCCcEEEEE-eCCCCcHHHHHHHc-CC-CCcCCCCCeECCCCEEEE
Confidence 34566 89988876 68999999999864 75 678899999999999988
No 82
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=93.16 E-value=0.54 Score=55.38 Aligned_cols=153 Identities=15% Similarity=0.199 Sum_probs=91.3
Q ss_pred CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHH
Q 000629 240 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 319 (1383)
Q Consensus 240 ~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~ 319 (1383)
...++.|.|.+|+.++++-... ..-...++.|||.+.+-.. ....++|++++ |+.|+.+++.+++||++++.+|.
T Consensus 37 a~~vv~p~~~edv~~~l~~a~~-~~ip~~v~GgGSNll~~d~-g~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~L~ 111 (305)
T PRK12436 37 ADVFVAPTNYDEIQEVIKYANK-YNIPVTFLGNGSNVIIKDG-GIRGITVSLIH---ITGVTVTGTTIVAQCGAAIIDVS 111 (305)
T ss_pred EEEEEecCCHHHHHHHHHHHHH-cCCCEEEEcCCeEEEEeCC-CeeEEEEEeCC---cCcEEEeCCEEEEEeCCcHHHHH
Confidence 4568899999999988852211 2346788999999875332 23468899875 55677778899999999999999
Q ss_pred HHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCc-eEEEeh
Q 000629 320 EALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-CEKLML 398 (1383)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g-~R~v~l 398 (1383)
+.+.++. +. -+...++ --+||||++.+-... +-.++.=+| . .+++...+| .++++-
T Consensus 112 ~~~~~~g----------l~----Gle~~~g----iPGtVGGav~~NAGa-yG~~~~dvl---~-~v~vv~~~G~v~~~~~ 168 (305)
T PRK12436 112 RIALDHN----------LT----GLEFACG----IPGSVGGALYMNAGA-YGGEISFVL---T-EAVVMTGDGELRTLTK 168 (305)
T ss_pred HHHHHcC----------Cc----cchhhcC----CccchhHHHHhcCcc-chhehheee---e-EEEEEeCCCCEEEEEH
Confidence 8765441 00 1111111 247999999765542 111111111 1 233334444 567777
Q ss_pred hh-hcc--CCCCCCC-ceEEEEEcCC
Q 000629 399 EE-FLE--RPPLDSR-SILLSVEIPC 420 (1383)
Q Consensus 399 ~d-F~~--~~~L~~~-eil~~I~IP~ 420 (1383)
+| +|. ...++.+ .||+++.+.+
T Consensus 169 ~e~~f~YR~s~~~~~~~iil~a~~~l 194 (305)
T PRK12436 169 EAFEFGYRKSVFANNHYIILEARFEL 194 (305)
T ss_pred HHhcCcCCCCcCCCCCEEEEEEEEEE
Confidence 77 332 3344432 3566555544
No 83
>PRK08166 NADH dehydrogenase subunit G; Validated
Probab=93.16 E-value=0.12 Score=69.27 Aligned_cols=104 Identities=22% Similarity=0.366 Sum_probs=72.8
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc------CCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG------EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
+++|+|||+.+++ .+++|||+.++.. |+. .-..|. .|.|+.|.|-+..-. . +-..+.+.||.+|+.
T Consensus 1 ~~~i~idg~~~~~---~~g~til~a~~~~-gi~-ip~~C~~~~~~~~G~C~~C~v~v~~g~-~--~~~~~~~~aC~~~v~ 72 (847)
T PRK08166 1 MATIHVDGKEYEV---NGADNLLEACLSL-GID-IPYFCWHPALGSVGACRQCAVKQYQNP-E--DTRGRLVMSCMTPAT 72 (847)
T ss_pred CeEEEECCEEEEe---CCCCHHHHHHHHc-CCC-CCccccCCCCCCCCccCCCeEEEeecC-c--cCCCCcccCcCCCCC
Confidence 4789999999777 4799999999753 432 345898 599999999994210 0 112457899999876
Q ss_pred hcCCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChHH
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPGM 128 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~ 128 (1383)
+|..|.|-.--- ...-.-+.+-+...|-..|..|.-|-
T Consensus 73 --~gm~v~t~~~~~--~~~r~~~~e~ll~~hp~dc~~c~~~g 110 (847)
T PRK08166 73 --DGTFISIDDPEA--KAFRASVVEWLMTNHPHDCPVCEEGG 110 (847)
T ss_pred --CCCEEEeCCHHH--HHHHHHHHHHHHhcCCCCCCccCCCC
Confidence 599998832110 11123466777889999999998663
No 84
>PTZ00038 ferredoxin; Provisional
Probab=92.58 E-value=0.21 Score=54.29 Aligned_cols=50 Identities=14% Similarity=0.344 Sum_probs=37.4
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
-.|+|.++....+++ +.++++||+.+++. |+ ....+|+.|.||.|.|-+.
T Consensus 96 ~~Vt~~~~~g~~~~~-v~~geTILdAae~a-GI-~lp~sCr~G~CGtCkvrV~ 145 (191)
T PTZ00038 96 YNITLQTPDGEKVIE-CDEDEYILDAAERQ-GV-ELPYSCRGGSCSTCAAKLL 145 (191)
T ss_pred EEEEEEeCCCcEEEE-eCCCCcHHHHHHHc-CC-CCCcCCCCccCCCCEeEEe
Confidence 346665332234454 57899999999864 75 7888999999999999883
No 85
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.
Probab=92.09 E-value=0.31 Score=60.05 Aligned_cols=103 Identities=14% Similarity=0.154 Sum_probs=70.6
Q ss_pred ceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHH
Q 000629 241 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 320 (1383)
Q Consensus 241 ~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~ 320 (1383)
...++|+|.+|+.++++.. ....++++||++.+-.- .....+||++++..+..+..+++.++++|++++.+|.+
T Consensus 13 ~~v~~P~s~~ev~~~v~~a----~~~v~~~G~Ghs~~~~~--~~~g~~idl~~l~~i~~~d~~~~~v~v~aG~~l~~l~~ 86 (419)
T TIGR01679 13 SAIVRPTDEGELADVIAQA----AKPVRAVGSGHSFTDLA--CTDGTMISLTGLQGVVDVDQPTGLATVEAGTRLGALGP 86 (419)
T ss_pred CeEECCCCHHHHHHHHHHh----CCCEEEEeCCCCCCCcc--cCCCEEEEhhHcCCceeecCCCCEEEEcCCCCHHHHHH
Confidence 3578999999999998853 23588888887764321 12358999988655444455578999999999999999
Q ss_pred HHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000629 321 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (1383)
.|.++- ..+| ..++ + +..||||.|++..-
T Consensus 87 ~L~~~G--------~~l~-------~~~~--~-~~~tvGG~ia~~~h 115 (419)
T TIGR01679 87 QLAQRG--------LGLE-------NQGD--I-DPQSIGGALGTATH 115 (419)
T ss_pred HHHHcC--------Cccc-------cCCC--C-CCceeccceecCCC
Confidence 877541 0111 1122 2 34789999987443
No 86
>TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=91.90 E-value=0.27 Score=59.05 Aligned_cols=52 Identities=23% Similarity=0.435 Sum_probs=43.2
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 11 ~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
...|+|..+|+.+++..++++.+||+.|.+ .|+ -...+|..|.||.|.|-+-
T Consensus 262 ~~~v~~~~~~~~~~~~~~~~~~slL~~~~~-~gi-~~~~~C~~G~Cg~C~~~~~ 313 (352)
T TIGR02160 262 VSKVTVTLDGRSTETSSLSRDESVLDAALR-ARP-DLPFACKGGVCGTCRAKVL 313 (352)
T ss_pred ceEEEEEECCceEEEEecCCCCcHHHHHHH-cCC-CCcCCCCCccCCCCEEEEe
Confidence 357899999998864337899999999975 475 6889999999999999983
No 87
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=91.17 E-value=1.2 Score=52.84 Aligned_cols=158 Identities=12% Similarity=0.110 Sum_probs=93.5
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceee---cCC--cE
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR---DQT--GI 307 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~---~~~--~L 307 (1383)
.+.+.+ ...|+.|.|.+|+.++++-... ..-...++.||+-+.+-. ..+.++|-+ + |+.++. +++ .+
T Consensus 14 t~riGG~A~~~~~p~~~~el~~~~~~~~~-~~~p~~vlG~GSNlLv~D--~~~g~vI~~-~---~~~~~~~~~~~~~~~v 86 (334)
T PRK00046 14 TFGIDARARHLVEAESEEQLLEALADARA-AGLPVLVLGGGSNVLFTE--DFDGTVLLN-R---IKGIEVLSEDDDAWYL 86 (334)
T ss_pred eeccCcEEeEEEeeCCHHHHHHHHHHHHH-cCCCEEEEeceEEEEECC--CCCEEEEEe-c---CCceEEEecCCCeEEE
Confidence 345566 6778999999999998873321 134578888888887643 355667765 3 444444 443 69
Q ss_pred EEcccccHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEE
Q 000629 308 EIGATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNI 387 (1383)
Q Consensus 308 ~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i 387 (1383)
++||++++.+|.....+.. +.. +.++++.+ |||||-+++-... +-.++.-+| -+|++
T Consensus 87 ~a~AG~~~~~l~~~~~~~g----------l~G----lE~l~gIP----GTVGGAv~mNaGa-yG~ei~d~l----~~V~v 143 (334)
T PRK00046 87 HVGAGENWHDLVLWTLQQG----------MPG----LENLALIP----GTVGAAPIQNIGA-YGVELKDVC----DYVEA 143 (334)
T ss_pred EEEcCCcHHHHHHHHHHcC----------chh----hHHhcCCC----cchhHHHHhcCCc-CcccHheeE----EEEEE
Confidence 9999999999998754431 111 23334333 6777776544331 012222222 14566
Q ss_pred EeCC-c-eEEEehhh-hcc--CCCCCC----CceEEEEEcCCC
Q 000629 388 MTGQ-K-CEKLMLEE-FLE--RPPLDS----RSILLSVEIPCW 421 (1383)
Q Consensus 388 ~~~~-g-~R~v~l~d-F~~--~~~L~~----~eil~~I~IP~~ 421 (1383)
...+ | .+++.-+| .|. ...++. +.||+++.+.+.
T Consensus 144 ~d~~~g~~~~~~~~e~~f~YR~S~f~~~~~~~~iVl~a~f~L~ 186 (334)
T PRK00046 144 LDLATGEFVRLSAAECRFGYRDSIFKHEYPDRYAITAVGFRLP 186 (334)
T ss_pred EECCCCcEEEEEHHHcCcccccccCCCCCcCCEEEEEEEEEec
Confidence 6543 4 67788887 332 333433 347777666543
No 88
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=90.74 E-value=0.96 Score=54.38 Aligned_cols=85 Identities=8% Similarity=0.062 Sum_probs=61.3
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeec--CCcEEEc
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRD--QTGIEIG 310 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~--~~~L~IG 310 (1383)
.+.+.+ ...|+.|.|.+|+.++++.... +.-...++.||+.+.+-.+ ..+.++|+++. +.|+.+ ++.+++|
T Consensus 26 t~~iGg~A~~~~~p~s~edl~~~l~~a~~-~~~p~~vlGgGSNlLv~D~-g~~GvVI~l~~----~~i~i~~~~~~v~vg 99 (363)
T PRK13903 26 TLRVGGPARRLVTCTSTEELVAAVRELDA-AGEPLLVLGGGSNLVIADD-GFDGTVVRVAT----RGVTVDCGGGLVRAE 99 (363)
T ss_pred EeecCccceEEEEeCCHHHHHHHHHHHHH-CCCCEEEEeCCeeEeECCC-CccEEEEEeCC----CcEEEeCCCCEEEEE
Confidence 345566 5678899999999998763321 2346888999998865332 35578898863 555555 6789999
Q ss_pred ccccHHHHHHHHHH
Q 000629 311 ATVTISKAIEALKE 324 (1383)
Q Consensus 311 A~vTl~~l~~~l~~ 324 (1383)
|++++.++.+.+.+
T Consensus 100 AG~~~~~l~~~a~~ 113 (363)
T PRK13903 100 AGAVWDDVVARTVE 113 (363)
T ss_pred cCCCHHHHHHHHHH
Confidence 99999999987544
No 89
>PRK10684 HCP oxidoreductase, NADH-dependent; Provisional
Probab=90.13 E-value=0.34 Score=57.78 Aligned_cols=48 Identities=29% Similarity=0.430 Sum_probs=35.8
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEe
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~ 64 (1383)
+++.+++...++. ++++.+||+.|++ .|+ -...+|+.|.||.|.|-+.
T Consensus 249 ~~v~~~~~~~~~~-~~~~~~lL~~~~~-~gi-~~~~~C~~G~Cg~C~~~~~ 296 (332)
T PRK10684 249 LTFTKLQPAREFY-APVGTTLLEALES-NKV-PVVAACRAGVCGCCKTKVV 296 (332)
T ss_pred eEEEEecCCEEEE-eCCCChHHHHHHH-cCC-CccCCCCCcCCCCCEEEEe
Confidence 3444443333443 4689999999975 576 7889999999999999983
No 90
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=90.10 E-value=1.2 Score=52.12 Aligned_cols=88 Identities=10% Similarity=0.051 Sum_probs=61.2
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCC--cEEEc
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQT--GIEIG 310 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~--~L~IG 310 (1383)
.+.+.+ ...|+.|+|.+|+.++++-... +.-...++.||+-+.+... .....+|+++.. .+ .+..+++ .+++|
T Consensus 14 t~~iGg~a~~~v~p~~~~dl~~~l~~~~~-~~ip~~vlG~GSNlL~~d~-g~~GvVI~l~~~-~~-~i~~~~~~~~v~v~ 89 (295)
T PRK14649 14 SWRIGGPARYFVEPTTPDEAIAAAAWAEQ-RQLPLFWLGGGSNLLVRDE-GFDGLVARYRGQ-RW-ELHEHGDTAEVWVE 89 (295)
T ss_pred EeeeCceeeEEEEcCCHHHHHHHHHHHHH-CCCCEEEEecceeEEEeCC-CcCeEEEEecCC-Cc-EEEEeCCcEEEEEE
Confidence 355666 6678889999999998763321 1346788888888865443 345688888642 23 4444444 79999
Q ss_pred ccccHHHHHHHHHHH
Q 000629 311 ATVTISKAIEALKEE 325 (1383)
Q Consensus 311 A~vTl~~l~~~l~~~ 325 (1383)
|++++.++...+.++
T Consensus 90 AG~~~~~l~~~~~~~ 104 (295)
T PRK14649 90 AGAPMAGTARRLAAQ 104 (295)
T ss_pred cCCcHHHHHHHHHHc
Confidence 999999999875543
No 91
>PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated
Probab=89.91 E-value=0.32 Score=58.05 Aligned_cols=47 Identities=28% Similarity=0.643 Sum_probs=38.2
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEE
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~ 63 (1383)
.+|+|.-+|+.+++ +++.+||+.|++. |+. ...+|+.|.||.|.|-+
T Consensus 3 ~~v~~~~~~~~~~~---~~g~tlL~a~~~~-gi~-~~~~C~~G~Cg~C~~~~ 49 (339)
T PRK07609 3 FQVTLQPSGRQFTA---EPDETILDAALRQ-GIH-LPYGCKNGACGSCKGRL 49 (339)
T ss_pred EEEEEecCCeEEEe---CCCCcHHHHHHHc-CCC-CCCCCCCeECCCCEEEE
Confidence 35777777776555 5799999999864 754 88999999999999987
No 92
>COG0633 Fdx Ferredoxin [Energy production and conversion]
Probab=89.69 E-value=0.49 Score=46.50 Aligned_cols=48 Identities=27% Similarity=0.537 Sum_probs=36.5
Q ss_pred EEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEEec
Q 000629 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLLSK 65 (1383)
Q Consensus 16 ~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~ 65 (1383)
...+++......++.+.+||+.+.+. |+. .-.+|+.|.||+|.|.|.+
T Consensus 7 v~~~~~~~~~~~~~~g~tiLe~a~~~-gi~-i~~~C~~g~C~TC~v~v~~ 54 (102)
T COG0633 7 VTIDGEGDVTEAVNEGETLLEAAERN-GIP-IEYACRGGACGTCRVKVLE 54 (102)
T ss_pred EeccCCcceEEeccCCcHHHHHHHHC-CCc-ceecCCCCccCccEEEEec
Confidence 34455444554456689999999754 766 7799999999999999954
No 93
>TIGR02007 fdx_isc ferredoxin, 2Fe-2S type, ISC system. This family consists of proteobacterial ferredoxins associated with and essential to the ISC system of 2Fe-2S cluster assembly. This family is closely related to (but excludes) eukaryotic (mitochondrial) adrenodoxins, which are ferredoxins involved in electron transfer to P450 cytochromes.
Probab=89.35 E-value=0.48 Score=47.17 Aligned_cols=42 Identities=19% Similarity=0.514 Sum_probs=32.6
Q ss_pred CCEEEEEccCCCCCcHHHHHhcccCCcccccCcc-CCCCCccEEEEec
Q 000629 19 NGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSK 65 (1383)
Q Consensus 19 Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~-~G~CGaCtV~~~~ 65 (1383)
+|+.+++ .++++||+.|++. |+. +-..|+ .|.||.|-|.|..
T Consensus 14 ~~~~~~~---~~g~tLL~a~~~~-gi~-i~~~CgG~G~CgtC~v~V~~ 56 (110)
T TIGR02007 14 EGAVVEA---KPGETILDVALDN-GIE-IEHACEKSCACTTCHCIVRE 56 (110)
T ss_pred CCeEEEE---CCCChHHHHHHHc-CCC-ccccCCCCceeCCCEEEEee
Confidence 3555444 5799999999864 765 778998 7999999998843
No 94
>TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit. This model represents the NqrF subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=88.70 E-value=0.47 Score=58.21 Aligned_cols=50 Identities=26% Similarity=0.529 Sum_probs=39.3
Q ss_pred cEEEEEECC-EEEEEccCCCCCcHHHHHhcccCCcccccCccC-CCCCccEEEEe
Q 000629 12 HSVVFAVNG-EKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGE-GGCGACVVLLS 64 (1383)
Q Consensus 12 ~~i~~~~Ng-~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~-G~CGaCtV~~~ 64 (1383)
..|++++|+ +..+++ +.+++|||+.++.. |+. ....|+. |.||.|.|.+.
T Consensus 30 ~~v~v~~~~~~~~~~~-~~~g~tlL~a~~~~-gi~-i~~~C~g~G~Cg~C~v~v~ 81 (405)
T TIGR01941 30 GDITIGINDDEEKSIT-VPAGGKLLNTLASN-GIF-ISSACGGGGTCGQCRVRVV 81 (405)
T ss_pred ccEEEEEcCCCceEEE-ECCCChHHHHHHHc-CCC-CcccCCCccEeCCCEEEEc
Confidence 458999985 445554 57899999999864 764 7788995 89999999984
No 95
>PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional
Probab=88.06 E-value=0.53 Score=57.80 Aligned_cols=51 Identities=27% Similarity=0.546 Sum_probs=40.2
Q ss_pred ccEEEEEECCE-EEEEccCCCCCcHHHHHhcccCCcccccCccC-CCCCccEEEEe
Q 000629 11 RHSVVFAVNGE-KFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGE-GGCGACVVLLS 64 (1383)
Q Consensus 11 ~~~i~~~~Ng~-~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~-G~CGaCtV~~~ 64 (1383)
+.++++++||. ..+++ +.++++||+.++.. |+. ....|+. |.||.|.|-+.
T Consensus 33 ~~~~~i~~~~~~~~~~~-~~~g~tLL~a~~~~-gi~-i~~~C~g~G~CgtC~v~v~ 85 (409)
T PRK05464 33 SGDVTIKINGDPEKTIT-VPAGGKLLGALASN-GIF-LSSACGGGGSCGQCRVKVK 85 (409)
T ss_pred CccEEEEEcCCCcEEEE-ECCCchHHHHHHHc-CCC-cccCCCCccEeCCCEEEEe
Confidence 46788999983 44555 57899999999864 774 6778995 99999999884
No 96
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=86.82 E-value=6.4 Score=45.77 Aligned_cols=158 Identities=21% Similarity=0.246 Sum_probs=93.2
Q ss_pred eeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCcccccee--ecCCcEEEcc
Q 000629 235 MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIR--RDQTGIEIGA 311 (1383)
Q Consensus 235 ~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~--~~~~~L~IGA 311 (1383)
..+.+ ...|+.|.+.+|+.+++..... +.-...++.||+-+.+..+ -...++|.+.. +..+. .+++.|++||
T Consensus 15 friGg~A~~~~~~~~~e~l~~~~~~~~~-~~~p~~ilG~GSNlLv~d~-g~~gvvi~~~~---~~~~~~~~~~~~i~a~a 89 (291)
T COG0812 15 FRIGGPAEVLVEPRDIEELKAALKYAKA-EDLPVLILGGGSNLLVRDG-GIGGVVIKLGK---LNFIEIEGDDGLIEAGA 89 (291)
T ss_pred EecCcceeEEEecCCHHHHHHHHHhhhh-cCCCEEEEecCceEEEecC-CCceEEEEccc---ccceeeeccCCeEEEcc
Confidence 44555 6789999999999998875421 2346788888888766544 23345555543 33333 3344999999
Q ss_pred cccHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCC-CC-CCchHHHHHhcCcEEEEEe
Q 000629 312 TVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK-HF-PSDVATVLLGAGAMVNIMT 389 (1383)
Q Consensus 312 ~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~-~~-~sDl~~~LlaldA~v~i~~ 389 (1383)
++.+.+|.....+.. +..| ...++.+ ||+||-+.+--.. +. -+|.+. +|++..
T Consensus 90 G~~~~~l~~~~~~~g----------l~Gl----E~l~gIP----GsvGgav~mNaGAyG~Ei~d~~~-------~v~~ld 144 (291)
T COG0812 90 GAPWHDLVRFALENG----------LSGL----EFLAGIP----GSVGGAVIMNAGAYGVEISDVLV-------SVEVLD 144 (291)
T ss_pred CCcHHHHHHHHHHcC----------Ccch----hhhcCCC----cccchhhhccCcccccchheeEE-------EEEEEc
Confidence 999999988744331 1211 1122221 5666654332221 00 033221 455556
Q ss_pred CCc-eEEEehhh-hc--cCCCCCCC-ceEEEEEcCCCC
Q 000629 390 GQK-CEKLMLEE-FL--ERPPLDSR-SILLSVEIPCWD 422 (1383)
Q Consensus 390 ~~g-~R~v~l~d-F~--~~~~L~~~-eil~~I~IP~~~ 422 (1383)
.+| .++++-+| -| +...++.. -+++++.+.+..
T Consensus 145 ~~G~~~~l~~~el~f~YR~S~f~~~~~vvl~v~f~L~~ 182 (291)
T COG0812 145 RDGEVRWLSAEELGFGYRTSPFKKEYLVVLSVEFKLTK 182 (291)
T ss_pred CCCCEEEEEHHHhCcccccCcCCCCCEEEEEEEEEeCC
Confidence 566 78999988 33 24445544 788888776654
No 97
>COG1034 NuoG NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [Energy production and conversion]
Probab=86.72 E-value=0.77 Score=59.18 Aligned_cols=94 Identities=22% Similarity=0.398 Sum_probs=63.5
Q ss_pred EEEEEECCEEEEEccCCCCCcHHHHHhcccCCccc----ccCcc-CCCCCccEEEEeccCCCcCCCCceeeceeeccchh
Q 000629 13 SVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSV----KLGCG-EGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS 87 (1383)
Q Consensus 13 ~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gt----k~gC~-~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 87 (1383)
+++++|||+.++++ .+.+||+..|+ .|+.=. ..+|+ -|.|.-|.|-+.. ..+++.||.+|+.
T Consensus 1 m~tI~IDG~ei~v~---~g~tvLqAa~~-aGi~IP~fCyh~~ls~~GaCRmClVEveg--------~~k~~~SC~tpv~- 67 (693)
T COG1034 1 MVTITIDGKEIEVP---EGETVLQAARE-AGIDIPTFCYHPRLSIAGACRMCLVEVEG--------APKLVASCATPVT- 67 (693)
T ss_pred CeEEEECCEEEecC---CCcHHHHHHHH-cCCCCCcccccCCCCcccceeEEEEEecC--------CCccccccccccC-
Confidence 46899999998886 47899999985 454321 23444 6889999998831 1289999999754
Q ss_pred cCCceeEEecccCCCCCCc----chHHHHHHhcCCCCCCCCCh
Q 000629 88 VNGCLITTSEGLGNSKTGF----HPIHQRFAGFHASQCGFCTP 126 (1383)
Q Consensus 88 ~~g~~i~TvEgl~~~~~~~----h~iq~a~~~~~~~qCG~Ctp 126 (1383)
+|..|-| + .+.. +-|.+.+.-+|-.=|+-|--
T Consensus 68 -dGM~I~T-----~-s~~vk~~R~~vmE~LLiNHPlDCpiCD~ 103 (693)
T COG1034 68 -DGMVIST-----N-SEEVKKAREGVMEFLLINHPLDCPVCDK 103 (693)
T ss_pred -CCeEEec-----C-CHHHHHHHHHHHHHHHhcCCCCCCccCC
Confidence 6988776 1 2222 34455555666666666653
No 98
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=86.62 E-value=3.8 Score=47.45 Aligned_cols=153 Identities=13% Similarity=0.129 Sum_probs=92.9
Q ss_pred ceeecCCceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccc
Q 000629 234 AMLLDVKGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATV 313 (1383)
Q Consensus 234 ~~~~~~~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~v 313 (1383)
.+.+.+.-+|+.|.|.+|+.+++. -...++.||+-+.+-.. -.+..+|-+.+. +..++.++ ++||++
T Consensus 14 t~riGG~A~~~~p~~~~~l~~~~~-------~p~~vlG~GSNlL~~D~-g~~g~vI~l~~~--~~~~~~~~---~a~AG~ 80 (273)
T PRK14651 14 TLGVGGPAELWTVETHEQLAEATE-------APYRVLGGGSNLLVSDA-GVPERVIRLGGE--FAEWDLDG---WVGGGV 80 (273)
T ss_pred EeecCceEEEEecCCHHHHHHHHC-------CCeEEEeceeEEEEcCC-CcceEEEEECCc--ceeEeECC---EEECCC
Confidence 345556334444999999999875 45778888887766443 344667776542 55555443 799999
Q ss_pred cHHHHHHHHHHHhhhhchhhhhhHHHHHHHHHHhcccccccccccCCccccccCCCCCCchHHHHHhcCcEEEEEeCCce
Q 000629 314 TISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKC 393 (1383)
Q Consensus 314 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlaldA~v~i~~~~g~ 393 (1383)
.+.+|.....+.. +. -+..+++.+ |||||-+++--.. |-.++.-.|. .|++...+..
T Consensus 81 ~~~~l~~~~~~~g----------l~----GlE~l~gIP----GTVGGAv~mNaGa-yG~ei~d~l~----~V~~~~~g~~ 137 (273)
T PRK14651 81 PLPGLVRRAARLG----------LS----GLEGLVGIP----AQVGGAVKMNAGT-RFGEMADALH----TVEIVHDGGF 137 (273)
T ss_pred cHHHHHHHHHHCC----------Cc----chhhhcCCC----cchhhHHHhhCCc-cccChheeEE----EEEEEECCCE
Confidence 9999998744331 11 122333332 7888887554432 1134433333 2333343447
Q ss_pred EEEehhh-hcc--CCCCCCCceEEEEEcCCCC
Q 000629 394 EKLMLEE-FLE--RPPLDSRSILLSVEIPCWD 422 (1383)
Q Consensus 394 R~v~l~d-F~~--~~~L~~~eil~~I~IP~~~ 422 (1383)
++++-+| .|. ...++.+.||+++.+.+.+
T Consensus 138 ~~~~~~e~~f~YR~S~~~~~~iIl~a~f~l~~ 169 (273)
T PRK14651 138 HQYSPDELGFGYRHSGLPPGHVVTRVRLKLRP 169 (273)
T ss_pred EEEEHHHccccccccCCCCCEEEEEEEEEECC
Confidence 8888888 343 4556666788888776654
No 99
>PRK05713 hypothetical protein; Provisional
Probab=86.50 E-value=0.91 Score=53.67 Aligned_cols=44 Identities=27% Similarity=0.538 Sum_probs=35.5
Q ss_pred EEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCccCCCCCccEEEE
Q 000629 15 VFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCGEGGCGACVVLL 63 (1383)
Q Consensus 15 ~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~ 63 (1383)
+|..||+.+++ .++.|||+.+++. |+ -...+|+.|.||.|.|.+
T Consensus 3 ~~~~~~~~~~~---~~g~tlL~a~~~~-gi-~~~~~C~~G~Cg~C~~~~ 46 (312)
T PRK05713 3 ELRVGERRWSV---PAGSNLLDALNAA-GV-AVPYSCRAGSCHACLVRC 46 (312)
T ss_pred cEecCCeEEEE---CCCCcHHHHHHHc-CC-CCCcCCCCcCCCCCeEEE
Confidence 57789987666 4799999999763 54 356789999999999998
No 100
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=86.39 E-value=4.6 Score=53.52 Aligned_cols=58 Identities=19% Similarity=0.232 Sum_probs=45.5
Q ss_pred CCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEecc------CCCCCCCCCC
Q 000629 787 ETQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITRR------VGGAFGGKAI 844 (1383)
Q Consensus 787 Ep~~avA~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~~------vGGgFG~K~~ 844 (1383)
.+..+....++||.++|+++++-. ..+++.+|+.||+|.++|+|...+ -+|.+|++.+
T Consensus 443 ~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t 511 (746)
T TIGR03194 443 PHATVALKLDFDGGITLLTGAADIGQGSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVT 511 (746)
T ss_pred CCceEEEEEcCCccEEEEEcCCCCCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHH
Confidence 356677778889999999887544 456788899999999999999655 4677777754
No 101
>PLN02441 cytokinin dehydrogenase
Probab=86.39 E-value=1.9 Score=54.26 Aligned_cols=82 Identities=12% Similarity=0.172 Sum_probs=55.9
Q ss_pred eEEecCCHHHHHHHHhhhcCC-CCCceeEEccCccceEeeecccCceEEecCCCcc------ccceeecCCcEEEccccc
Q 000629 242 SWHSPISVQELRNVLESVEGS-NQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPE------LSVIRRDQTGIEIGATVT 314 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~-~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~E------L~~I~~~~~~L~IGA~vT 314 (1383)
..+.|+|.+|+.++++..... ..-..++.+||+++.-... ....++||++++.. ...+..+...+++||+++
T Consensus 67 aVv~P~S~eDVa~iVr~A~~~~~~~~V~~rGgGHS~~G~a~-~~~GivIdms~Ln~i~~~~~ii~vd~~~~~VtV~aG~~ 145 (525)
T PLN02441 67 AVLYPSSVEDIASLVRAAYGSSSPLTVAARGHGHSLNGQAQ-APGGVVVDMRSLRGGVRGPPVIVVSGDGPYVDVSGGEL 145 (525)
T ss_pred EEEeCCCHHHHHHHHHHHhhccCCceEEEECCCcCCCCCcc-CCCeEEEECCCCCCcCccCceEEEcCCCCEEEEcCCCC
Confidence 568999999999988854210 1223566788888743211 12468999998765 233444566899999999
Q ss_pred HHHHHHHHHH
Q 000629 315 ISKAIEALKE 324 (1383)
Q Consensus 315 l~~l~~~l~~ 324 (1383)
+.++.+.+.+
T Consensus 146 ~~dv~~~l~~ 155 (525)
T PLN02441 146 WIDVLKATLK 155 (525)
T ss_pred HHHHHHHHHH
Confidence 9999876543
No 102
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=85.66 E-value=1.7 Score=52.22 Aligned_cols=100 Identities=13% Similarity=0.149 Sum_probs=61.2
Q ss_pred HHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHHHHHHhhh
Q 000629 249 VQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKE 328 (1383)
Q Consensus 249 l~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~l~~~~~~ 328 (1383)
++|+.++++.... ++-..++..|||....-. .....+||++++..+..+..++..++++|++++.+|.+.|.++--
T Consensus 4 ~~ev~~~v~~A~~-~~~~v~~~GgGt~~~~g~--~~~~~vldl~~ln~Ile~d~~~~~vtV~AG~~l~el~~~L~~~G~- 79 (352)
T PRK11282 4 SAALLERVRQAAA-DGTPLRIRGGGSKDFYGR--ALAGEVLDTRAHRGIVSYDPTELVITARAGTPLAELEAALAEAGQ- 79 (352)
T ss_pred HHHHHHHHHHHHH-CCCeEEEECCCCCCCCCC--CCCCeEEEcccCCCcEEEcCCCCEEEECCCCCHHHHHHHHHHcCC-
Confidence 3455544442211 234578889998532201 112458999987665556666789999999999999998776410
Q ss_pred hchhhhhhHHHHHHHHHHhcccccccccccCCccccccC
Q 000629 329 FHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 367 (1383)
Q Consensus 329 ~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 367 (1383)
.+| +-.+.....+||||+|++...
T Consensus 80 -------~lp--------~~p~~~~~~~TIGG~iatg~~ 103 (352)
T PRK11282 80 -------MLP--------FEPPHFGGGATLGGMVAAGLS 103 (352)
T ss_pred -------eeC--------CCCCCcCCCcEehhHHhcCCC
Confidence 010 001123335899999997654
No 103
>COG3383 Uncharacterized anaerobic dehydrogenase [General function prediction only]
Probab=84.99 E-value=1.5 Score=55.63 Aligned_cols=98 Identities=19% Similarity=0.320 Sum_probs=71.4
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCC-----cccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccch
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRF-----KSVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLC 86 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l-----~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 86 (1383)
.+|+++|||+.+++. +.+|+|++|.+. |+ .-.+.-=.-|.|--|.|.+ +|+.+.||.+++.
T Consensus 4 ~~i~vtidg~~~~v~---~G~tiL~a~~~~-gI~iP~iCy~~~l~pi~sCd~ClVEi----------dG~l~rsCsT~v~ 69 (978)
T COG3383 4 KMITVTIDGRSIEVE---EGTTILRAANRN-GIEIPHICYHESLGPIGSCDTCLVEI----------DGKLVRSCSTPVE 69 (978)
T ss_pred eeEEEEECCeEEecC---CChHHHHHHHhc-CCcccceeccCCCCcccccceEEEEe----------cCceecccccccc
Confidence 358999999988774 699999999753 43 3333344568999999998 7899999999976
Q ss_pred hcCCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChH
Q 000629 87 SVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPG 127 (1383)
Q Consensus 87 ~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG 127 (1383)
+|..|.|-.-.-+ +.-..+.+.+...|-.-|--|--+
T Consensus 70 --dGm~v~t~s~rvk--~~r~~~md~~l~nH~LyC~vCd~n 106 (978)
T COG3383 70 --DGMVVRTNSERVK--EARREAMDRILSNHPLYCTVCDNN 106 (978)
T ss_pred --CCcEEecccHHHH--HHHHHHHHHHHhcCCcCccccCCC
Confidence 6999998532211 111234456778899888777766
No 104
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=84.21 E-value=2.3 Score=50.79 Aligned_cols=89 Identities=18% Similarity=0.285 Sum_probs=60.0
Q ss_pred ceeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCcccccee-ecC-CcEEEc
Q 000629 234 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIR-RDQ-TGIEIG 310 (1383)
Q Consensus 234 ~~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~-~~~-~~L~IG 310 (1383)
.+.+.+ ...|+.|.|.+|+.++++.... ..-...++.||+-+.+-.. ..+..+|.+.++.++.... .++ ..|++|
T Consensus 23 T~rIGG~A~~~~~p~s~~el~~~l~~~~~-~~~p~~iLG~GSNlL~~D~-g~~G~VI~l~~~~~i~i~~~~~~~~~v~ag 100 (354)
T PRK14648 23 SFRIGGAAQFWAEPRSCTQLRALIEEAQR-ARIPLSLIGGGSNVLIADE-GVPGLMLSLRRFRSLHTQTQRDGSVLVHAG 100 (354)
T ss_pred eeeeCcEEEEEEeeCCHHHHHHHHHHHHH-cCCCEEEEeceeEEEEeCC-CccEEEEEeCCcCceEEeeccCCcEEEEEE
Confidence 355666 6789999999999998874321 1335677888887766443 4557888875554443111 233 369999
Q ss_pred ccccHHHHHHHHHH
Q 000629 311 ATVTISKAIEALKE 324 (1383)
Q Consensus 311 A~vTl~~l~~~l~~ 324 (1383)
|++.+.+|.....+
T Consensus 101 AG~~~~~Lv~~~~~ 114 (354)
T PRK14648 101 AGLPVAALLAFCAH 114 (354)
T ss_pred eCCcHHHHHHHHHH
Confidence 99999999887443
No 105
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=82.80 E-value=9 Score=51.01 Aligned_cols=60 Identities=25% Similarity=0.306 Sum_probs=48.1
Q ss_pred CCCCCceEEEECCCCcEEEEeCCC----Ch-HHHHHHHHHHhCCCCCcEEEEe-------ccCCCCCCCCCC
Q 000629 785 YMETQTALAVPDEDNCLVVYSSIQ----CP-ESAHATIARCLGIPEHNVRVIT-------RRVGGAFGGKAI 844 (1383)
Q Consensus 785 ~mEp~~avA~~~~~g~l~V~~stQ----~p-~~~r~~vA~~Lglp~~kVrV~~-------~~vGGgFG~K~~ 844 (1383)
.++...+....++||.++|++++. .. ..+.+.+|+.||+|.++|+|+. ++-+|.||++..
T Consensus 457 ~~~~~~a~v~i~~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t 528 (759)
T PRK09970 457 GLEIAGARLLMNQDGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQS 528 (759)
T ss_pred CCCcceEEEEEccCceEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhH
Confidence 356677888888899999999984 33 4457888999999999999984 456788888864
No 106
>KOG2282 consensus NADH-ubiquinone oxidoreductase, NDUFS1/75 kDa subunit [Energy production and conversion]
Probab=80.56 E-value=2.8 Score=50.90 Aligned_cols=106 Identities=19% Similarity=0.344 Sum_probs=76.9
Q ss_pred CCCCCcccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc------CCCCCccEEEEeccCCCcCCCCceee
Q 000629 5 QQHGGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG------EGGCGACVVLLSKYNPELDQLEDFTI 78 (1383)
Q Consensus 5 ~~~~~~~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v 78 (1383)
.+|-.+-.+|+..|+|+.+.| +|.+|.|+--- ..|..= ..=|- -|.|--|.|.|.+ .-++|
T Consensus 24 ~~~~a~~~~ievfvd~~~v~v---~pg~tvlqac~-~~gv~i-prfcyh~rlsvagncrmclvevek--------spkpv 90 (708)
T KOG2282|consen 24 TATPASPNKIEVFVDDQSVMV---EPGTTVLQACA-KVGVDI-PRFCYHERLSVAGNCRMCLVEVEK--------SPKPV 90 (708)
T ss_pred eeccCCccceEEEECCeeEee---CCCcHHHHHHH-HhCCCc-chhhhhhhhhhccceeEEEEEecc--------CCCcc
Confidence 455566689999999998876 48999998653 223322 22243 4899999999954 24799
Q ss_pred ceeeccchhcCCceeEEecccCCCCCCcchHHHHHHhcCCCCCCCCChH
Q 000629 79 SSCLTLLCSVNGCLITTSEGLGNSKTGFHPIHQRFAGFHASQCGFCTPG 127 (1383)
Q Consensus 79 ~sCl~~~~~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG 127 (1383)
.||-||+ +.|+.|.|=--+.+ ..-.-+.+-|.-+|-.-|.-|--|
T Consensus 91 a~campv--m~g~~iktns~~~k--karegvmefll~nhpldcpicdqg 135 (708)
T KOG2282|consen 91 AACAMPV--MKGWKIKTNSDKSK--KAREGVMEFLLMNHPLDCPICDQG 135 (708)
T ss_pred hhhcccc--cCCceeecCchHHH--HHHHHHHHHHHhCCCCCCCccCCC
Confidence 9999996 46999999655532 123457788888999999988866
No 107
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=72.99 E-value=7.2 Score=51.97 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=44.7
Q ss_pred CceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEecc------CCCCCCCCCC
Q 000629 789 QTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITRR------VGGAFGGKAI 844 (1383)
Q Consensus 789 ~~avA~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~~------vGGgFG~K~~ 844 (1383)
..+....++||.++|+++++.. ..+.+.+|+.||+|.++|+|+..+ -+|.||++.+
T Consensus 476 ~~a~v~l~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t 542 (770)
T TIGR02416 476 DSCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRST 542 (770)
T ss_pred ceEEEEECCCceEEEEECCCCCCCCchHHHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHH
Confidence 3577777888999999998654 346788899999999999998654 4678888864
No 108
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=69.98 E-value=6.5 Score=52.26 Aligned_cols=58 Identities=9% Similarity=0.043 Sum_probs=45.3
Q ss_pred CCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe------ccCCCCCCCCCC
Q 000629 787 ETQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAI 844 (1383)
Q Consensus 787 Ep~~avA~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~------~~vGGgFG~K~~ 844 (1383)
.+..+....++||.++|+++++.. ..+.+.+|+.||+|.++|+|.. +..+|.+|++.+
T Consensus 446 ~~~~a~v~i~~dG~v~v~~g~~e~GQG~~T~laQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t 514 (758)
T TIGR02965 446 NQAGALVHVYTDGSIHLNHGGTEMGQGLNTKVAQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGS 514 (758)
T ss_pred CccceEEEEeCCCcEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHH
Confidence 345667777888999999998653 3457778999999999999985 456777888864
No 109
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=69.02 E-value=8.3 Score=52.38 Aligned_cols=59 Identities=19% Similarity=0.236 Sum_probs=47.7
Q ss_pred CCCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEecc------CCCCCCCCCC
Q 000629 786 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITRR------VGGAFGGKAI 844 (1383)
Q Consensus 786 mEp~~avA~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~~------vGGgFG~K~~ 844 (1383)
+++..+....++||.++|+++++.. ..+.+.+|+.||+|.++|+|+..+ -+|.||++.+
T Consensus 658 ~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~~QiaAe~LGvp~d~V~v~~~DT~~~p~~~gt~aSr~t 727 (951)
T TIGR03313 658 IDQANCMIKLESDGTFIVHSGGADIGTGLDTVVSKLTAEVLHCPMDDVHVISGDTDHALFDKGAYASSGT 727 (951)
T ss_pred CCCccEEEEEcCCceEEEEECCCCCCccHHHHHHHHHHHHHCCCHHhEEEEeCCCCCCCCCCCCcHHHHH
Confidence 4566777778889999999999854 556788999999999999999644 4778888864
No 110
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=68.51 E-value=12 Score=51.05 Aligned_cols=59 Identities=19% Similarity=0.231 Sum_probs=47.3
Q ss_pred CCCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------cCCCCCCCCCC
Q 000629 786 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITR------RVGGAFGGKAI 844 (1383)
Q Consensus 786 mEp~~avA~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFG~K~~ 844 (1383)
+++..+....+.||.++|+++++.. ..+.+.+|+.||+|.++|+|+.. .-+|.||++.+
T Consensus 662 ~~~~~a~v~l~~dGsv~v~~g~~e~GqG~~T~~~QiaAe~LGip~d~V~v~~~DT~~~p~~~gt~aSr~t 731 (956)
T PRK09800 662 IDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGT 731 (956)
T ss_pred CCCceEEEEECCCceEEEEECCCCCCccHHHHHHHHHHHHHCCCceeEEEEeCCCCCCCCCCCcchhhhH
Confidence 4556677777888999999998754 45678899999999999999964 45778888865
No 111
>PLN00192 aldehyde oxidase
Probab=65.87 E-value=2.5e+02 Score=40.17 Aligned_cols=124 Identities=16% Similarity=0.046 Sum_probs=76.3
Q ss_pred CCCcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccc
Q 000629 1053 LRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEA 1132 (1383)
Q Consensus 1053 ~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~ 1132 (1383)
..+..+....+.||.++|+++++. . +.+...+|..||+ |.++|+|+. |.-+|.+|++.+..
T Consensus 761 mEp~~~vA~~~~dg~l~V~~sTQ~----p-~~~r~~vA~~Lgi--------p~~~VrV~~------~~vGGgFGgK~~~~ 821 (1344)
T PLN00192 761 METQTALALPDEDNCIVVYSSTQC----P-EYVHSVIARCLGI--------PEHNVRVIT------RRVGGGFGGKAVKS 821 (1344)
T ss_pred ccCceEEEEEcCCCCEEEEECCCC----H-HHHHHHHHHHhCC--------ChHHEEEEe------cccccCCCcccccc
Confidence 346677777788899999998753 3 3567788999999 999999995 45578899886543
Q ss_pred hHH--HHHHHHHHHHHHHHHHHHHHhccCCCcCH--HHHHHHHhhcCceeEEEEeeccCCCcccccceeEEEEEEEEECC
Q 000629 1133 SCQ--VVRDCCNILVERLTLLRERLQGQMGNVEW--ETLIQQAHLQSVNLSASSMYVPDFTSVQYLNYGAAVSEVEVNLL 1208 (1383)
Q Consensus 1133 ~g~--Av~~A~~~L~~rl~~~a~~l~~~~~~~~~--~~~~~~a~~~~~~l~a~~~~~~~~~~~~~~~~ga~~aEVEVD~~ 1208 (1383)
.-. ++..|+.+++ ++-++.| +|-. ... + ....+-. =.++-+|.
T Consensus 822 ~~~~~~aAlaA~~~g------------RPVr~~~sR~Edm----------~~~------~---~R~~~~~-~~k~g~~~- 868 (1344)
T PLN00192 822 MPVATACALAAFKLQ------------RPVRMYLNRKTDM----------IMA------G---GRHPMKI-TYSVGFKS- 868 (1344)
T ss_pred chHHHHHHHHHHHhC------------CCEEEEecHHHHh----------hhc------C---CcCceEE-EEEEEECC-
Confidence 332 2222333332 1101111 1111 000 0 0012222 23666774
Q ss_pred CCcEEEEEEEEEecCCccCC
Q 000629 1209 TGETTIVRSDIIYDCGQSLN 1228 (1383)
Q Consensus 1209 TG~v~V~r~~~v~D~G~~iN 1228 (1383)
.|++.=.++.+..|.|-..+
T Consensus 869 dG~I~a~~~~~~~d~Ga~~~ 888 (1344)
T PLN00192 869 DGKITALHLDILINAGISPD 888 (1344)
T ss_pred CCCEEEEEEEEEEecccCCC
Confidence 79999999999999997643
No 112
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=55.98 E-value=18 Score=48.75 Aligned_cols=70 Identities=17% Similarity=0.149 Sum_probs=47.8
Q ss_pred CCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------cCCCCCCCCCCCccHHHHHHHHH
Q 000629 788 TQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITR------RVGGAFGGKAIKAMPVATACALA 856 (1383)
Q Consensus 788 p~~avA~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFG~K~~~~~~~~~~aAla 856 (1383)
+..++.... ||.++|+++++.. ..+.+.+|+.||+|.++|+|+.. +-+|.+|++.+. ..-.++-.|
T Consensus 594 ~~~~~~~~~-DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~aSR~t~--~~G~Av~~A 670 (848)
T TIGR03311 594 TGRCNLAVE-DGKVHIRTSAACIGQGLGTVLTQIVCETTGLPPEVIVCELPDTALTPDSGTTTASRQSL--FTGEATRRA 670 (848)
T ss_pred cceEEEEEc-CCEEEEEECCCCcCcCHHHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCchhhHHH--HHHHHHHHH
Confidence 345566665 7899999998654 34567789999999999999864 457778888642 222333344
Q ss_pred HHHc
Q 000629 857 AYKL 860 (1383)
Q Consensus 857 A~~~ 860 (1383)
|.++
T Consensus 671 a~~l 674 (848)
T TIGR03311 671 AAKL 674 (848)
T ss_pred HHHH
Confidence 4544
No 113
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=55.75 E-value=21 Score=50.42 Aligned_cols=59 Identities=19% Similarity=0.113 Sum_probs=46.3
Q ss_pred CCCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEecc------CCCCCCCCCC
Q 000629 786 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITRR------VGGAFGGKAI 844 (1383)
Q Consensus 786 mEp~~avA~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~~------vGGgFG~K~~ 844 (1383)
+...+++...+.||.++|+++++.. ..+.+.+|+.||||.++|+|...+ .+|.+|++.+
T Consensus 1015 ~~~~~a~v~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~gSr~t 1084 (1330)
T TIGR02969 1015 MGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGTSTETVPNTNASGGSVVA 1084 (1330)
T ss_pred CCCccEEEEEcCCceEEEEECCcCcCCChHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCCchHHHH
Confidence 4456777877788999999997544 345778899999999999998644 4788888864
No 114
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=53.66 E-value=28 Score=44.64 Aligned_cols=57 Identities=25% Similarity=0.098 Sum_probs=39.7
Q ss_pred CCCcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccc
Q 000629 1053 LRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGST 1128 (1383)
Q Consensus 1053 ~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr 1128 (1383)
..+..+....+.||.++|.++++. . ..+...+|+.||+ |.++|+|.. |+-+|.+|++
T Consensus 48 mEp~~~~A~~~~~g~l~v~~~tQ~----p-~~~r~~va~~lgl--------p~~~V~V~~------~~~GGgFG~~ 104 (547)
T PF02738_consen 48 MEPHGAVAWWDEDGRLTVWSSTQW----P-FHVRRAVAEALGL--------PPEKVRVIS------PYVGGGFGKK 104 (547)
T ss_dssp SS-SEEEEEEETTTEEEEEES-SS----H-HHHHHHHHHHHTS---------GGGEEEEE------SB-S--TTTT
T ss_pred CCCCeEEEEEccCCCEEEEECCcC----H-hHHHHHHhhhhcC--------ChhHEEEee------eecCCCCCCc
Confidence 345677777788999999998753 2 3567888999999 999999995 4556777743
No 115
>PLN02906 xanthine dehydrogenase
Probab=53.33 E-value=29 Score=49.06 Aligned_cols=59 Identities=15% Similarity=0.084 Sum_probs=45.8
Q ss_pred CCCCceEEEECCCCcEEEEeCCC----ChH-HHHHHHHHHhCCCCCcEEEEe------ccCCCCCCCCCC
Q 000629 786 METQTALAVPDEDNCLVVYSSIQ----CPE-SAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAI 844 (1383)
Q Consensus 786 mEp~~avA~~~~~g~l~V~~stQ----~p~-~~r~~vA~~Lglp~~kVrV~~------~~vGGgFG~K~~ 844 (1383)
+.+..+....+.||.++|+++++ ..+ .+.+.+|+.||+|.++|+|.. |..+|.+|++.+
T Consensus 1010 ~~~~~a~V~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~d~V~v~~~DT~~~p~~~gT~aSr~t 1079 (1319)
T PLN02906 1010 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFISETSTDKVPNASPTAASASS 1079 (1319)
T ss_pred CCccceEEEEcCCceEEEEECCccCCCChHHHHHHHHHHHHCCCHHHEEEEccCCCCCCCCCCCccchhh
Confidence 44566777777889999999774 433 357778999999999999985 445788888865
No 116
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=52.67 E-value=29 Score=46.30 Aligned_cols=61 Identities=18% Similarity=0.112 Sum_probs=46.7
Q ss_pred CCCcceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCcccCCCcCcccccccc
Q 000629 1053 LRSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEA 1132 (1383)
Q Consensus 1053 ~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~~p~~~~t~aSr~t~~ 1132 (1383)
..+..+....++||+++|+++++. . ..+...+|..||+ |.++|+|+.. +-+|.+|++....
T Consensus 182 mEp~~~~A~~~~~g~l~v~~stQ~----p-~~~r~~lA~~Lgl--------p~~~VrV~~~------~vGGgFG~K~~~~ 242 (768)
T TIGR03196 182 LAPEAALAMPAADGGFDLRAATQH----G-HKDREQIAACFDI--------PEEKIRITLA------GMGGAFGGKDDLN 242 (768)
T ss_pred cCCceEEEEEcCCCCEEEEECCCc----h-HHHHHHHHHHhCC--------CHHHEEEEeC------CCCCccCCccccc
Confidence 345677777777899999998753 3 2456678899999 9999999854 5578899886654
No 117
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=47.97 E-value=62 Score=30.24 Aligned_cols=53 Identities=17% Similarity=0.167 Sum_probs=40.7
Q ss_pred ceEEEEcCCCcEEEEeCCccCCcChhHHHHHHHHHHhCCccCCCCCCCCCceEEEcCCCCc
Q 000629 1057 PGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLS 1117 (1383)
Q Consensus 1057 ~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~~~~~~~~~~~I~v~~~dT~~ 1117 (1383)
.....++.||.+.|.....+..-=.+..+....|+.||+ |..+|+++.|-|..
T Consensus 17 ~~i~~~~~~~~l~i~v~app~~GkAN~ali~~La~~l~v--------~ks~i~i~~G~~Sr 69 (77)
T PF02594_consen 17 NAIVGVEGDGALKIRVTAPPVDGKANKALIRFLAKALGV--------PKSDIEIVSGHTSR 69 (77)
T ss_dssp -EEEEE-TTT-EEEEBSTTCCCCCHHHHHHHHHHHHCT----------TTCEEECC-CCCS
T ss_pred cccccccCceEEEEEEecCCCcChhHHHHHHHHHHHhCC--------CcccEEEEecCCCC
Confidence 344467777999999999888778899999999999999 99999999998753
No 118
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form. This model describes the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason.Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=46.55 E-value=46 Score=45.83 Aligned_cols=80 Identities=14% Similarity=0.134 Sum_probs=55.9
Q ss_pred ccEEEEEECCEEEEEccCCCCCcHHHHHhcc-cCC--cccccC------ccCCCCCccEEEEeccCCCcCCCCc-eeece
Q 000629 11 RHSVVFAVNGEKFEVSSVDPSTTLLEFLRYH-TRF--KSVKLG------CGEGGCGACVVLLSKYNPELDQLED-FTISS 80 (1383)
Q Consensus 11 ~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~-~~l--~gtk~g------C~~G~CGaCtV~~~~~~~~~~~~~~-~~v~s 80 (1383)
...|+|++||++++.- +..||..-|--. ..+ ++.|.| |.-|.|--|.|.|+.- -.+ .-+.+
T Consensus 10 ~~~~~~~~dg~~~~~~---~g~t~a~al~a~g~~~~~~s~~~~~prg~~c~~~~~~~c~v~i~~~------~~~~~~~~a 80 (985)
T TIGR01372 10 SRPLRFTFDGKSYSGF---AGDTLASALLANGVHLVGRSFKYHRPRGILTAGVEEPNALVTVGSG------AQREPNTRA 80 (985)
T ss_pred CCeEEEEECCEEeecC---CCCHHHHHHHhCCCeeecccCCCCCCCcccccCccCCCeEEEECCC------cCCCCCccc
Confidence 3589999999998874 688888766431 112 344443 8877789999999411 001 23789
Q ss_pred eeccchhcCCceeEEecccCC
Q 000629 81 CLTLLCSVNGCLITTSEGLGN 101 (1383)
Q Consensus 81 Cl~~~~~~~g~~i~TvEgl~~ 101 (1383)
|++++. +|..|.|.-+..+
T Consensus 81 c~~~~~--~gm~~~~~~~~~~ 99 (985)
T TIGR01372 81 TTQELY--DGLVATSQNRWPS 99 (985)
T ss_pred eeEEcc--cCCEEecccCCCc
Confidence 999976 6999999887654
No 119
>PRK07440 hypothetical protein; Provisional
Probab=46.39 E-value=24 Score=32.19 Aligned_cols=30 Identities=30% Similarity=0.515 Sum_probs=24.0
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCc
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK 45 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~ 45 (1383)
.++.++|||+++++. ..+||.++|+ ++++.
T Consensus 3 ~~m~i~vNG~~~~~~---~~~tl~~lL~-~l~~~ 32 (70)
T PRK07440 3 NPITLQVNGETRTCS---SGTSLPDLLQ-QLGFN 32 (70)
T ss_pred CceEEEECCEEEEcC---CCCCHHHHHH-HcCCC
Confidence 368899999998875 4789999997 45664
No 120
>PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed
Probab=44.21 E-value=9.8 Score=43.38 Aligned_cols=16 Identities=50% Similarity=1.186 Sum_probs=14.5
Q ss_pred ccCccCCCCCccEEEE
Q 000629 48 KLGCGEGGCGACVVLL 63 (1383)
Q Consensus 48 k~gC~~G~CGaCtV~~ 63 (1383)
..+|+.|.||+|.|.+
T Consensus 214 ~m~cg~G~C~~C~~~~ 229 (250)
T PRK00054 214 RMKCGIGACGACVCDT 229 (250)
T ss_pred cccCcCcccCcCCccc
Confidence 4699999999999987
No 121
>cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (formi
Probab=40.94 E-value=16 Score=41.27 Aligned_cols=17 Identities=41% Similarity=0.935 Sum_probs=15.0
Q ss_pred cccCccCCCCCccEEEE
Q 000629 47 VKLGCGEGGCGACVVLL 63 (1383)
Q Consensus 47 tk~gC~~G~CGaCtV~~ 63 (1383)
.+-+|+.|.||+|+|-.
T Consensus 212 ~~m~Cg~G~C~~C~~~~ 228 (243)
T cd06192 212 SPMCCGIGICGACTIET 228 (243)
T ss_pred ccccCccccccceEEEe
Confidence 46799999999999975
No 122
>COG2104 ThiS Sulfur transfer protein involved in thiamine biosynthesis [Coenzyme metabolism]
Probab=40.91 E-value=36 Score=31.01 Aligned_cols=31 Identities=19% Similarity=0.428 Sum_probs=25.2
Q ss_pred cEEEEEECCEEEEEccCCCCCcHHHHHhcccCCcc
Q 000629 12 HSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKS 46 (1383)
Q Consensus 12 ~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~g 46 (1383)
|++++.+||+.+++. ..+||.|+|+ ++++..
T Consensus 1 ~~m~i~~ng~~~e~~---~~~tv~dLL~-~l~~~~ 31 (68)
T COG2104 1 MPMTIQLNGKEVEIA---EGTTVADLLA-QLGLNP 31 (68)
T ss_pred CcEEEEECCEEEEcC---CCCcHHHHHH-HhCCCC
Confidence 578899999999886 2499999998 467764
No 123
>PRK06083 sulfur carrier protein ThiS; Provisional
Probab=40.88 E-value=36 Score=32.34 Aligned_cols=34 Identities=15% Similarity=0.305 Sum_probs=26.0
Q ss_pred CCcccEEEEEECCEEEEEccCCCCCcHHHHHhcccCCc
Q 000629 8 GGTRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK 45 (1383)
Q Consensus 8 ~~~~~~i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~ 45 (1383)
++..+++.++|||+.+++. ...||.++|.. +++.
T Consensus 13 ~~~~~~m~I~VNG~~~~~~---~~~tl~~LL~~-l~~~ 46 (84)
T PRK06083 13 GAAMVLITISINDQSIQVD---ISSSLAQIIAQ-LSLP 46 (84)
T ss_pred CCCCceEEEEECCeEEEcC---CCCcHHHHHHH-cCCC
Confidence 3444679999999999885 47899999974 5653
No 124
>PRK08053 sulfur carrier protein ThiS; Provisional
Probab=37.72 E-value=68 Score=28.77 Aligned_cols=28 Identities=14% Similarity=0.182 Sum_probs=21.9
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCc
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK 45 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~ 45 (1383)
+.++|||+++++. ..+||.++|.. +++.
T Consensus 1 m~i~vNg~~~~~~---~~~tl~~ll~~-l~~~ 28 (66)
T PRK08053 1 MQILFNDQPMQCA---AGQTVHELLEQ-LNQL 28 (66)
T ss_pred CEEEECCeEEEcC---CCCCHHHHHHH-cCCC
Confidence 3589999999985 46899999964 5654
No 125
>PF10437 Lip_prot_lig_C: Bacterial lipoate protein ligase C-terminus; InterPro: IPR019491 This is the C-terminal domain of a bacterial lipoate protein ligase. There is no conservation between this C terminus and that of vertebrate lipoate protein ligase C-termini, but both are associated with IPR004143 from INTERPRO, further upstream. This C-terminal domain is more stable than IPR004143 from INTERPRO and the hypothesis is that the C-terminal domain has a role in recognising the lipoyl domain and/or transferring the lipoyl group onto it from the lipoyl-AMP intermediate. C-terminal fragments of length 172 to 193 amino acid residues are observed in the eubacterial enzymes whereas in their archaeal counterparts the C-terminal segment is significantly smaller, ranging in size from 87 to 107 amino acid residues. ; PDB: 1X2G_A 3A7R_A 3A7A_A 1X2H_C 1VQZ_A 3R07_C.
Probab=37.22 E-value=1e+02 Score=29.03 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=35.9
Q ss_pred CceeeeeEEEEcccCCcccccHHHHHHHHcCCCCChHHHHHHHHHH
Q 000629 470 GIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLL 515 (1383)
Q Consensus 470 ~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 515 (1383)
+|+|++++|.=-.+... . ..+.|+.|.|.+.+.+.+.++++.+
T Consensus 26 ~G~I~~i~i~gDf~~~~-~--i~~le~~L~G~~~~~~~i~~~l~~~ 68 (86)
T PF10437_consen 26 NGIIKDIKIYGDFFGPE-D--IEELEEALIGCPYDREAIKEALNSV 68 (86)
T ss_dssp TTEEEEEEEEECBS-CC-C--HHHHHHHHTTCBSSHHHHHHHHHHC
T ss_pred CCEEEEEEEECCCCCch-H--HHHHHHHHHhcCCCHHHHHHHHHHh
Confidence 58999999985555554 4 7899999999999999999998877
No 126
>KOG4730 consensus D-arabinono-1, 4-lactone oxidase [Defense mechanisms]
Probab=35.49 E-value=59 Score=39.82 Aligned_cols=81 Identities=15% Similarity=0.178 Sum_probs=51.8
Q ss_pred eEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccccHHHHHHH
Q 000629 242 SWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 321 (1383)
Q Consensus 242 ~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~vTl~~l~~~ 321 (1383)
+.-.|+|++|+.++.+.... .+...|.|. .++.+-+-...-..+|++..+.--..+.-+--.+++=|++|+.||.+.
T Consensus 52 nv~yP~teaeL~~lVa~A~~-a~~kirvVg--~gHSp~~l~ctdg~lisl~~lnkVv~~dpe~~tvTV~aGirlrQLie~ 128 (518)
T KOG4730|consen 52 NVNYPKTEAELVELVAAATE-AGKKIRVVG--SGHSPSKLVCTDGLLISLDKLNKVVEFDPELKTVTVQAGIRLRQLIEE 128 (518)
T ss_pred ccCCCCCHHHHHHHHHHHHH-cCceEEEec--ccCCCCcceeccccEEEhhhhccceeeCchhceEEeccCcCHHHHHHH
Confidence 45569999999999885421 123445544 444443322233478887766433333334457889999999999998
Q ss_pred HHHH
Q 000629 322 LKEE 325 (1383)
Q Consensus 322 l~~~ 325 (1383)
+.+.
T Consensus 129 ~~~~ 132 (518)
T KOG4730|consen 129 LAKL 132 (518)
T ss_pred HHhc
Confidence 7765
No 127
>TIGR02911 sulfite_red_B sulfite reductase, subunit B. Members of this protein family include the B subunit, one of three subunits, of the anaerobic sulfite reductase of Salmonella, and close homologs from various Clostridum species, where the three-gene neighborhood is preserved. Two such gene clusters are found in Clostridium perfringens, but it may be that these sets of genes correspond to the distinct assimilatory and dissimilatory forms as seen in Clostridium pasteurianum.
Probab=34.90 E-value=15 Score=42.21 Aligned_cols=28 Identities=29% Similarity=0.549 Sum_probs=20.6
Q ss_pred HHHHHhcccCC--------cccccCccCCCCCccEEE
Q 000629 34 LLEFLRYHTRF--------KSVKLGCGEGGCGACVVL 62 (1383)
Q Consensus 34 Ll~~LR~~~~l--------~gtk~gC~~G~CGaCtV~ 62 (1383)
+.+.|++ .|+ -.++-.|+.|-||+|+|-
T Consensus 205 ~~~~L~~-~Gv~~~~i~~~~~~~m~cg~g~c~~c~~~ 240 (261)
T TIGR02911 205 TVQELLK-KGIKEENIWVSYERKMCCGVGKCGHCKID 240 (261)
T ss_pred HHHHHHH-cCCCHHHEEEEeccceeccCcCCCCcccC
Confidence 4555654 354 357889999999999984
No 128
>PRK05863 sulfur carrier protein ThiS; Provisional
Probab=34.44 E-value=44 Score=29.92 Aligned_cols=28 Identities=32% Similarity=0.444 Sum_probs=22.4
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCc
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK 45 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~ 45 (1383)
+.++|||+++++. +.+||.++|.. +++.
T Consensus 1 m~i~vNG~~~~~~---~~~tl~~ll~~-l~~~ 28 (65)
T PRK05863 1 MIVVVNEEQVEVD---EQTTVAALLDS-LGFP 28 (65)
T ss_pred CEEEECCEEEEcC---CCCcHHHHHHH-cCCC
Confidence 3689999999885 47899999974 6664
No 129
>KOG3049 consensus Succinate dehydrogenase, Fe-S protein subunit [Energy production and conversion]
Probab=34.16 E-value=22 Score=38.82 Aligned_cols=64 Identities=22% Similarity=0.374 Sum_probs=38.9
Q ss_pred EEEEccCCCCCcHHHHHhc---ccCCc-ccccCccCCCCCccEEEEeccCCCcCCCCceeeceeeccchhcCCceeEEe
Q 000629 22 KFEVSSVDPSTTLLEFLRY---HTRFK-SVKLGCGEGGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTS 96 (1383)
Q Consensus 22 ~~~~~~~~~~~~Ll~~LR~---~~~l~-gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 96 (1383)
.++|+--+=...+||-|-. +..-| -.+..|.||.||.|..-+ +|.--.+|+.-+-+ ++...++|
T Consensus 67 ~y~vDL~~CGpMvLDALiKIKnE~DptLTFRRSCREGICGSCAMNI----------~G~NtLACi~kId~-n~sK~~kI 134 (288)
T KOG3049|consen 67 TYEVDLNDCGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNI----------NGTNTLACICKIDQ-NESKSTKI 134 (288)
T ss_pred eeeecHHhcchHHHHHHHHhhcccCCceehhhhhhccccccceecc----------CCCceeEEEEeecc-CCccccee
Confidence 3444421334566776632 22111 247899999999999988 57777899877655 33333333
No 130
>PF10418 DHODB_Fe-S_bind: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; InterPro: IPR019480 Lactococcus lactis is one of the few organisms with two dihydroorotate dehydrogenases (DHODs) A and B []. The B enzyme is typical of DHODs in Gram-positive bacteria that use NAD+ as the second substrate. DHODB is a heterotetramer composed of a central homodimer of PyrDB subunits resembling the DHODA structure and two PyrK subunits along with three different cofactors: FMN, FAD, and a [2Fe-2S] cluster. The [2Fe-2S] iron-sulphur cluster binds to this C-terminal domain of the PyrK subunit, which is at the interface between the flavin and NAD binding domains and contains three beta-strands. The four cysteine residues at the N-terminal part of this domain are the ones that bind, in pairs, to the iron-sulphur cluster. The conformation of the whole molecule means that the iron-sulphur cluster is localized in a well-ordered part of this domain close to the FAD binding site []. The FAD and NAD binding domains are IPR008333 from INTERPRO and IPR001433 from INTERPRO respectively. ; PDB: 1EP2_B 1EP3_B 1EP1_B.
Probab=33.10 E-value=26 Score=28.51 Aligned_cols=17 Identities=47% Similarity=1.288 Sum_probs=12.7
Q ss_pred ccCccCCCCCccEEEEe
Q 000629 48 KLGCGEGGCGACVVLLS 64 (1383)
Q Consensus 48 k~gC~~G~CGaCtV~~~ 64 (1383)
+-+|+-|.|++|.|-..
T Consensus 3 ~M~CG~G~C~~C~v~~~ 19 (40)
T PF10418_consen 3 RMACGVGACGGCVVPVK 19 (40)
T ss_dssp --SSSSSSS-TTEEECS
T ss_pred cccCCCcEeCCcEeeee
Confidence 56899999999999774
No 131
>PRK05659 sulfur carrier protein ThiS; Validated
Probab=30.20 E-value=55 Score=29.11 Aligned_cols=27 Identities=19% Similarity=0.305 Sum_probs=21.6
Q ss_pred EEEECCEEEEEccCCCCCcHHHHHhcccCCc
Q 000629 15 VFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK 45 (1383)
Q Consensus 15 ~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~ 45 (1383)
.++|||+.+++. ..+||.++|. .+++.
T Consensus 2 ~i~vNG~~~~~~---~~~tl~~lL~-~l~~~ 28 (66)
T PRK05659 2 NIQLNGEPRELP---DGESVAALLA-REGLA 28 (66)
T ss_pred EEEECCeEEEcC---CCCCHHHHHH-hcCCC
Confidence 689999998875 4789999996 46665
No 132
>COG3894 Uncharacterized metal-binding protein [General function prediction only]
Probab=28.11 E-value=58 Score=40.35 Aligned_cols=47 Identities=34% Similarity=0.622 Sum_probs=37.4
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCcccccCcc-CCCCCccEEEEecc
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLSKY 66 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~-~G~CGaCtV~~~~~ 66 (1383)
++|.=-||+.+ +..+|.|+.-|+ +| -+++.-|+ .|.||-|.|.|.+.
T Consensus 4 v~f~psgkr~~----~~g~~il~aar~-~g-v~i~s~cggk~~cgkc~v~v~~g 51 (614)
T COG3894 4 VTFMPSGKRGE----DEGTTILDAARR-LG-VYIRSVCGGKGTCGKCQVVVQEG 51 (614)
T ss_pred eEeecCCCcCC----CCCchHHHHHHh-hC-ceEeeecCCCccccceEEEEEeC
Confidence 67777888866 357899999985 56 56788887 89999999999654
No 133
>COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion]
Probab=27.31 E-value=61 Score=37.31 Aligned_cols=50 Identities=26% Similarity=0.525 Sum_probs=36.9
Q ss_pred cEEEEEECCE-EEEEccCCCCCcHHHHHhcccCCcccccCcc-CCCCCccEEEEe
Q 000629 12 HSVVFAVNGE-KFEVSSVDPSTTLLEFLRYHTRFKSVKLGCG-EGGCGACVVLLS 64 (1383)
Q Consensus 12 ~~i~~~~Ng~-~~~~~~~~~~~~Ll~~LR~~~~l~gtk~gC~-~G~CGaCtV~~~ 64 (1383)
-.|++.|||- ..+.+ +++..+||.-|-.. |+. +-..|+ .|.||-|.|.|.
T Consensus 35 gd~ti~IN~d~e~~~t-~~aG~kLL~~L~~~-gif-i~SaCGGggsC~QCkv~v~ 86 (410)
T COG2871 35 GDITIKINGDPEKTKT-VPAGGKLLGALASS-GIF-ISSACGGGGSCGQCKVRVK 86 (410)
T ss_pred CceEEEeCCChhhcee-cCCchhHHHHHHhC-Ccc-cccCCCCCccccccEEEEe
Confidence 4688999983 33444 68899999999764 543 455676 678999999883
No 134
>PRK08221 anaerobic sulfite reductase subunit B; Provisional
Probab=26.14 E-value=25 Score=40.58 Aligned_cols=17 Identities=41% Similarity=0.982 Sum_probs=14.7
Q ss_pred ccccCccCCCCCccEEE
Q 000629 46 SVKLGCGEGGCGACVVL 62 (1383)
Q Consensus 46 gtk~gC~~G~CGaCtV~ 62 (1383)
.++-.|+.|-||+|+|.
T Consensus 226 ~~~m~cg~g~c~~c~~~ 242 (263)
T PRK08221 226 ERKMCCGVGKCGHCKID 242 (263)
T ss_pred cceeEccCcccCCcccC
Confidence 45789999999999974
No 135
>PRK07696 sulfur carrier protein ThiS; Provisional
Probab=25.50 E-value=81 Score=28.49 Aligned_cols=29 Identities=28% Similarity=0.519 Sum_probs=21.7
Q ss_pred EEEEECCEEEEEccCCCCCcHHHHHhcccCCc
Q 000629 14 VVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFK 45 (1383)
Q Consensus 14 i~~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~ 45 (1383)
+.++|||+.+++.. +..||.++|. .+++.
T Consensus 1 m~I~vNG~~~~~~~--~~~tv~~lL~-~l~~~ 29 (67)
T PRK07696 1 MNLKINGNQIEVPE--SVKTVAELLT-HLELD 29 (67)
T ss_pred CEEEECCEEEEcCC--CcccHHHHHH-HcCCC
Confidence 35899999998852 3368999997 46764
No 136
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=25.17 E-value=1.1e+02 Score=35.25 Aligned_cols=73 Identities=12% Similarity=0.109 Sum_probs=50.0
Q ss_pred eeecC-CceEEecCCHHHHHHHHhhhcCCCCCceeEEccCccceEeeecccCceEEecCCCccccceeecCCcEEEcccc
Q 000629 235 MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATV 313 (1383)
Q Consensus 235 ~~~~~-~~~~~~P~sl~e~l~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~L~IGA~v 313 (1383)
+.+.+ ..-|+.|.+.+ + . -...++.+|+-+.+-... ...+| + ..+++.++.+++.|++||++
T Consensus 13 ~~iGG~A~~~~~~~~~~-l----~-------~p~~vlG~GSNlLv~D~g--~~~vv-~--~~~~~~~~~~~~~v~~~AG~ 75 (257)
T PRK13904 13 VKIGPPLEVLVLEEIDD-F----S-------QDGQIIGGANNLLISPNP--KNLAI-L--GKNFDYIKIDGECLEIGGAT 75 (257)
T ss_pred eeECceEEEEEEechhh-h----C-------CCeEEEeceeEEEEecCC--ccEEE-E--ccCcCeEEEeCCEEEEEcCC
Confidence 44555 44567787776 4 2 357788888877664432 34555 2 23467778788899999999
Q ss_pred cHHHHHHHHHH
Q 000629 314 TISKAIEALKE 324 (1383)
Q Consensus 314 Tl~~l~~~l~~ 324 (1383)
.+.+|.....+
T Consensus 76 ~l~~l~~~~~~ 86 (257)
T PRK13904 76 KSGKIFNYAKK 86 (257)
T ss_pred cHHHHHHHHHH
Confidence 99999887443
No 137
>PRK08364 sulfur carrier protein ThiS; Provisional
Probab=24.01 E-value=1e+02 Score=28.07 Aligned_cols=31 Identities=19% Similarity=0.294 Sum_probs=23.5
Q ss_pred EEEEEECCE--EEEEccCCCCCcHHHHHhcccCCc
Q 000629 13 SVVFAVNGE--KFEVSSVDPSTTLLEFLRYHTRFK 45 (1383)
Q Consensus 13 ~i~~~~Ng~--~~~~~~~~~~~~Ll~~LR~~~~l~ 45 (1383)
+|++.+||+ +.+++ +++++|+.++|+ ++++.
T Consensus 4 mm~v~vng~~~~~~~~-~~~~~tv~~ll~-~l~~~ 36 (70)
T PRK08364 4 MIRVKVIGRGIEKEIE-WRKGMKVADILR-AVGFN 36 (70)
T ss_pred EEEEEEeccccceEEE-cCCCCcHHHHHH-HcCCC
Confidence 488999999 44554 467899999996 56764
No 138
>TIGR01683 thiS thiamine biosynthesis protein ThiS. This model represents ThiS, a small thiamine-biosynthesis protein related to MoaD, a molybdenum cofactor biosynthesis protein. Both proteins are involved in sulfur transfer. ThiS has a conserved Gly-Gly C-terminus that is modified, in reactions requiring ThiI, ThiF, IscS, and a sulfur atom from Cys, into the thiocarboxylate that provides the sulfur for thiazole biosynthesis.
Probab=23.40 E-value=1.4e+02 Score=26.56 Aligned_cols=26 Identities=35% Similarity=0.460 Sum_probs=20.6
Q ss_pred EEECCEEEEEccCCCCCcHHHHHhcccCCc
Q 000629 16 FAVNGEKFEVSSVDPSTTLLEFLRYHTRFK 45 (1383)
Q Consensus 16 ~~~Ng~~~~~~~~~~~~~Ll~~LR~~~~l~ 45 (1383)
++|||+.+++. ..+||.++|. .+++.
T Consensus 1 i~iNg~~~~~~---~~~tv~~ll~-~l~~~ 26 (64)
T TIGR01683 1 ITVNGEPVEVE---DGLTLAALLE-SLGLD 26 (64)
T ss_pred CEECCeEEEcC---CCCcHHHHHH-HcCCC
Confidence 47999999885 3689999997 46665
No 139
>cd06220 DHOD_e_trans_like2 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.
Probab=22.47 E-value=40 Score=37.93 Aligned_cols=16 Identities=38% Similarity=0.928 Sum_probs=14.4
Q ss_pred ccCccCCCCCccEEEE
Q 000629 48 KLGCGEGGCGACVVLL 63 (1383)
Q Consensus 48 k~gC~~G~CGaCtV~~ 63 (1383)
...|+.|.||+|.|-.
T Consensus 200 f~~cg~g~C~~C~v~~ 215 (233)
T cd06220 200 YMKCGIGICGSCCIDP 215 (233)
T ss_pred cccCcCCCcCccEecc
Confidence 4699999999999976
No 140
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=20.72 E-value=2.2e+02 Score=26.68 Aligned_cols=43 Identities=16% Similarity=0.363 Sum_probs=28.8
Q ss_pred ceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe
Q 000629 790 TALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT 832 (1383)
Q Consensus 790 ~avA~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~ 832 (1383)
..+.-+.++|.|.|....+-- ..+.+.+|+.|++|.++|+++.
T Consensus 17 ~~i~~~~~~~~l~i~v~app~~GkAN~ali~~La~~l~v~ks~i~i~~ 64 (77)
T PF02594_consen 17 NAIVGVEGDGALKIRVTAPPVDGKANKALIRFLAKALGVPKSDIEIVS 64 (77)
T ss_dssp -EEEEE-TTT-EEEEBSTTCCCCCHHHHHHHHHHHHCT--TTCEEECC
T ss_pred cccccccCceEEEEEEecCCCcChhHHHHHHHHHHHhCCCcccEEEEe
Confidence 345444444678888877643 5678999999999999999986
No 141
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases. Clostridium pasteurianum inducible dissimilatory type sulfite reductase is linked to ferredoxin and reduces NH2OH and SeO3 at a lesser rate than it's normal substate SO3(2-). Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+.
Probab=20.36 E-value=39 Score=38.59 Aligned_cols=17 Identities=35% Similarity=0.985 Sum_probs=15.5
Q ss_pred ccccCccCCCCCccEEE
Q 000629 46 SVKLGCGEGGCGACVVL 62 (1383)
Q Consensus 46 gtk~gC~~G~CGaCtV~ 62 (1383)
.++-.|++|-||+|.|.
T Consensus 224 ~~~~~~~~g~c~~c~~~ 240 (253)
T cd06221 224 ERRMKCGVGKCGHCQIG 240 (253)
T ss_pred hhccccCCccccCcccC
Confidence 67889999999999996
Done!