Your job contains 1 sequence.
>000633
MAPSRRKGASKAAAAAAARRQWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVF
FFGTQQIAFCNPADVEAFTEEKKQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSN
SGDELTVANGGNSVNSISHLKDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLD
ALPAKEPLPEQPSENLVAKATPVLTTYSSRKRSGGSRLQSTQRMAPSTRRSRSSTMVESC
RLQNLMMPYNNEGKNAEGISAKSILDGSLIRNKRTRKSPDGSECNDLDSSALMSNGSIED
NSSEIVTVESDAFSLNEGSTVDSGCKVEDSETVLECLDGDEMLSKRLDFQIKAVVVKKKR
KPNRKRVCNDAVDPPARINTATEVDVSTRNTCHSSENTGGNLDERDFKEDGDEHLPLVKR
ARVRMGKPSSEEELKSSLQTEEKPSKDTAVNLVEHISPSLNNYDEGFTEKGPSLVKESTD
SVSPSKVCSEVSGNRPQLWKGTTNQSFGCSADGEAALPPSKRLHRALEAMSANAAEEGQA
SVQASSLINTSINGCCVNSICKCSHETVDSRERSGSGLQNVPTCDQLSENCNSQKQESFR
DDVGSVDNVDGKDLPGSPFSVHTIQTAVQTQTPVNILPDPKKRHSSFQLYQNSLDQLSLK
DEGSAEDLQLKDSRVENVDKEFNTSALVELSLDPVSGADESVKLSPQNGSNELQYSVQGM
SYENSESLKSQIDDNCHINARCEAVEEIKQNEKQKEMSSVSISDDHLGDKGVASVLFSSS
PAEGVDSPARVSPPNTSLCHVSTSESANIVQSSSSSPYARSQYKKSLGAPVADEGKVDTT
LTQRPKSVGKWSSCSEAHAALSSFEAVLGSLTRTKESIGRATRIAIDCAKFGVSSKVVEI
VARHLESESSLYRRVDLFFLVDSIMQCSRGMKAILTVLPRLLSAAAPPGNVAQENRRQCL
KVLRLWLERRILPESIIRHHMRELDTVTCSSSAVAYSRRSSRTERALDDPVRDMEGMLVD
EYGSNSSFQLPGFCMPRMLKDDDDGSDSDGGSFEAVTPEHNSEIPEERDANPSMKKHRHI
LEEVDGELEMEDVAPTCDNEMSSTVLVDIAQTSHDQLLSFVPPLPQDVPPSSPPLPSSPP
PVLPPPPSIPHSCAFSDSYSNGASMQNMQNDGQQSVTQQSVAPRINSTVSTNAVHYHASE
CRDHQMPMQMPESTSSFGCYSMRPSNNFQQTDGPRFHNKPYPPRPPHAPQSNHFSYVQAS
QSAKSRREAPHPSNSHRFHPHPNFDGGNFYNNHDRMKPGPYEHRESWRFSAPSFSGPRYP
DEARECYPSGSYGGPLREPPRYSNRGWAYPPRPMNHRHMRPPSGGAVPVGIRAPGAWRPR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000633
(1380 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2099242 - symbol:AT3G63070 "AT3G63070" species... 1615 5.4e-166 1
TAIR|locus:2039351 - symbol:AT2G48160 species:3702 "Arabi... 1274 8.5e-162 2
TAIR|locus:2178292 - symbol:HUA2 "ENHANCER OF AG-4 2" spe... 568 1.0e-72 4
TAIR|locus:2181569 - symbol:AT5G08230 "AT5G08230" species... 502 2.3e-64 4
UNIPROTKB|Q9Y3E1 - symbol:HDGFRP3 "Hepatoma-derived growt... 164 8.9e-13 2
RGD|628773 - symbol:Hdgfrp3 "hepatoma-derived growth fact... 159 9.0e-13 2
MGI|MGI:1352760 - symbol:Hdgfrp3 "hepatoma-derived growth... 159 1.8e-12 2
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 217 9.4e-12 2
UNIPROTKB|Q59SG9 - symbol:PGA55 "Flocculin-like protein" ... 217 9.4e-12 2
ZFIN|ZDB-GENE-050213-2 - symbol:hdgfrp3 "hepatoma-derived... 159 2.5e-11 2
UNIPROTKB|P51858 - symbol:HDGF "Hepatoma-derived growth f... 167 6.0e-10 1
UNIPROTKB|F1SMR3 - symbol:PSIP1 "Uncharacterized protein"... 167 4.9e-09 1
UNIPROTKB|E1BP00 - symbol:PSIP1 "PC4 and SFRS1-interactin... 181 6.1e-09 2
UNIPROTKB|B8Y8S3 - symbol:PSIP1 "LEDGF/p75" species:9940 ... 170 6.6e-09 1
UNIPROTKB|Q9XSK7 - symbol:HDGF "Hepatoma-derived growth f... 159 7.5e-09 1
UNIPROTKB|Q8MJG1 - symbol:PSIP1 "PC4 and SFRS1-interactin... 169 8.4e-09 1
UNIPROTKB|F1NXS9 - symbol:PSIP1 "Lens epithelium-derived ... 165 8.8e-09 1
UNIPROTKB|A1YAF7 - symbol:PSIP1 "LEDGF/p75" species:9796 ... 167 1.4e-08 1
RGD|70961 - symbol:Hdgf "hepatoma-derived growth factor" ... 155 2.3e-08 1
UNIPROTKB|Q8VHK7 - symbol:Hdgf "Hepatoma-derived growth f... 155 2.3e-08 1
UNIPROTKB|Q9NZW4 - symbol:DSPP "Dentin sialophosphoprotei... 169 3.0e-08 1
UNIPROTKB|O75475 - symbol:PSIP1 "PC4 and SFRS1-interactin... 164 3.1e-08 2
MGI|MGI:1194494 - symbol:Hdgf "hepatoma-derived growth fa... 154 3.1e-08 1
UNIPROTKB|D2H2Y2 - symbol:PANDA_004016 "Putative uncharac... 163 3.5e-08 1
UNIPROTKB|E2REJ7 - symbol:PSIP1 "Uncharacterized protein"... 167 4.9e-08 3
MGI|MGI:2142116 - symbol:Psip1 "PC4 and SFRS1 interacting... 162 1.6e-07 2
RGD|631439 - symbol:Psip1 "PC4 and SFRS1 interacting prot... 161 3.4e-07 2
UNIPROTKB|F1SW39 - symbol:SBP75 "PC4 and SFRS1-interactin... 161 3.4e-07 2
UNIPROTKB|Q66T72 - symbol:PSIP1 "PC4 and SFRS1-interactin... 164 4.2e-07 2
UNIPROTKB|F1NKN6 - symbol:PSIP1 "Lens epithelium-derived ... 165 1.1e-06 3
FB|FBgn0036203 - symbol:Muc68D "Mucin 68D" species:7227 "... 152 2.4e-06 1
ZFIN|ZDB-GENE-050522-104 - symbol:psip1 "PC4 and SFRS1 in... 144 2.9e-06 1
UNIPROTKB|Q5XXA9 - symbol:PSIP1 "Lens epithelium-derived ... 160 4.5e-06 3
MGI|MGI:1194492 - symbol:Hdgfrp2 "hepatoma-derived growth... 128 4.9e-06 3
UNIPROTKB|E1BHR3 - symbol:HDGFRP3 "Uncharacterized protei... 121 9.1e-06 2
DICTYBASE|DDB_G0280177 - symbol:DDB_G0280177 "Hepatoma-de... 146 9.6e-06 4
WB|WBGene00015501 - symbol:C06A5.3 species:6239 "Caenorha... 133 9.0e-05 2
RGD|621013 - symbol:Hdgfrp2 "hepatoma-derived growth fact... 138 9.3e-05 2
UNIPROTKB|Q939N5 - symbol:gspB "Platelet binding protein ... 136 0.00018 2
UNIPROTKB|Q29NG1 - symbol:GA18401 "Putative oxidoreductas... 127 0.00037 1
UNIPROTKB|K7EQZ6 - symbol:HDGFRP2 "Hepatoma-derived growt... 130 0.00047 3
UNIPROTKB|I3L080 - symbol:HDGFRP2 "Hepatoma-derived growt... 130 0.00047 3
UNIPROTKB|Q7Z4V5 - symbol:HDGFRP2 "Hepatoma-derived growt... 130 0.00090 3
>TAIR|locus:2099242 [details] [associations]
symbol:AT3G63070 "AT3G63070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00855 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006397 GO:GO:0006351
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL163816 InterPro:IPR006569
SMART:SM00582 PROSITE:PS51391 UniGene:At.34000 IPI:IPI00527412
IPI:IPI01019558 PIR:T48096 RefSeq:NP_191866.3
ProteinModelPortal:F4IZM8 SMR:F4IZM8 PRIDE:F4IZM8
EnsemblPlants:AT3G63070.1 GeneID:825482 KEGG:ath:AT3G63070
TAIR:At3g63070 eggNOG:NOG256515 HOGENOM:HOG000176901
InParanoid:Q9LYB5 OMA:KEDGDEH Uniprot:F4IZM8
Length = 1347
Score = 1615 (573.6 bits), Expect = 5.4e-166, P = 5.4e-166
Identities = 506/1395 (36%), Positives = 697/1395 (49%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
+WKVGDLVLAKVKGFPAWPA V EPEKWG+SAD KKV V FFGTQQIAFCN DVE+FTE
Sbjct: 21 EWKVGDLVLAKVKGFPAWPAVVDEPEKWGHSADSKKVTVHFFGTQQIAFCNHGDVESFTE 80
Query: 81 EKKQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
EKKQSLLT+R +G+DFVRAV+EI +SYEKLK+QDQ E T A G+S N+ S L
Sbjct: 81 EKKQSLLTRRHAKGSDFVRAVKEITESYEKLKQQDQASGPKYAEETTA--GSSGNT-SQL 137
Query: 141 KDRTE-ASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAK 199
E + LD+Q++ S+S D L L +ED+ A Q+ AL ++ AK
Sbjct: 138 PQACENLIGSRLDTQIESSSSHGRDELTLLSEDASAAEQMLALRHNTLAHNGACDSAAAK 197
Query: 200 ATPVLTTYSSRKRSGGSRL--QSTQRMAPSTRRSRSSTMVESCRLQNLMMPYNNEGKNAE 257
+ TYSSR+R+ R + Q + S+ S+ +E R+Q M+ ++ G +
Sbjct: 198 DLCEIATYSSRRRNERVRALKYAPQSIILPVEHSKISSRLELDRVQRSMLQCSDGGPSVN 257
Query: 258 GISAKSILDGSLIRNKRTRKSPDGSECNDLDSSALMSNGSIEDNSSEIVTVESDAFSLNE 317
I+ K+I R KR R S SE +D+ SS L +GS EDN+SEI TVES+ S NE
Sbjct: 258 SINGKAIR-----RRKRIRTSGQ-SESDDVVSSDLNLHGSDEDNASEIATVESNNNSRNE 311
Query: 318 GSTVDSGCKVEDSETVLECLDGDEMLSKRLDFQIXXXXXXXXXXXXXXXXCNDAVDPPAR 377
G+ VDSG KVE S+ V E DG L+K LDF I +D +DPPA+
Sbjct: 312 GNGVDSGSKVEYSDAVGEGCDGGHELNKGLDFHISTMVKRKKRKPTRKRETSDIIDPPAK 371
Query: 378 INTATEVDVSTRNTCHSSENTGGNLDERDFKEDGDEHLPLVKRARVRMGKPXXXXXXXXX 437
+ A + + ++C S+N+ L+ER +E+GDEHLPLVKRARVRM +
Sbjct: 372 VE-AEGLGPNACDSCQRSQNSHERLNERPCEENGDEHLPLVKRARVRMSRAFYADEKVNA 430
Query: 438 XXXXXX-PSKDTAVNLVEHISPSLNNYDEGF-TEKGPSLVKESTD---SVSPSKVCSEVS 492
SKDT ++ SPS+N ++ G + S +E S S V +V
Sbjct: 431 SSQVEERSSKDTLLSAALQTSPSVN-HENGIGSGHDTSAAEEFNSFELSAKLSGVMVDVV 489
Query: 493 GNRPQLWKGTTNQSFGCS---ADGEAALPPSKRLHRALEAMSANAAEEGQASVQASSLIN 549
+ + + S C D + A+ H M+ + S Q SSL+
Sbjct: 490 PSHMEKPSDRMSPSVACVQTVGDRQTAV----NFHENEFTMTLDDEVTRAQSNQLSSLVE 545
Query: 550 TSINGCCVNSICK-CSHETVDSRERSGSGLQNVPTCDQLSENCN--SQKQES-FRDDVGS 605
T V + + CS E+ ++G+ L + D + C+ S+K E+ D+
Sbjct: 546 TEAR---VPEVVQGCSEES-----QTGNCL--ISETDPIDIQCSHQSEKHETPLNPDI-- 593
Query: 606 VDNVDGKDLPGSPFSVHTIQTAVQTQTP-VNILPDPKKRHSSFQLYQNSLDQLSLK-DEG 663
VD+ K PG S+ T V Q+P + + + S + +SL+ K D
Sbjct: 594 VDSSANKS-PGLCSSLDMTTTVVPAQSPHQHKIQEYDSSDHSLVIVGDSLNGKCEKIDYC 652
Query: 664 SAEDLQ--------------LKDSRVENVDKEFNTSALVELSLDPVSGADESVKL----S 705
+ +Q + VEN+ + NT E P D + +
Sbjct: 653 MTQVVQSQALEPPPPLFCSVVNYQEVENLQETENT-LWKENQGSPGKELDSDKQAHMIQN 711
Query: 706 PQNGSNELQYSVQGMS--YENSESLKSQIDDNCHINARCEAVEEIKQNEKQKEMSSVSIS 763
P + E + V YE S + +N + CE V+E Q E+ + +S+S+S
Sbjct: 712 PVLSATESEMIVDDAEPQYETVYSHCADAVENRELEKSCE-VDE--QKEQMQATNSISVS 768
Query: 764 DDHLGDKGVASVLFSSSPAEGVDSPARVSPPNTSLCHVSTSESANIVQXXXXXPYARS-Q 822
++ +K +SSPA G +P S+C +ST+ES N +Q Y+ + Q
Sbjct: 769 ENFSREK------LNSSPARG-------TPNCNSVCRISTAESENAMQNNSY--YSTNVQ 813
Query: 823 Y--KKSLGAP-VADEGKVDTTLTQRPKSVGKWSSCSEAHAALSSFEAVLGSLTRTKESIG 879
Y KSL V +E KV+T TQ K V S+ + SFE L SL RTKE+IG
Sbjct: 814 YGENKSLNVDTVKEESKVETGTTQVKKVVS-----SDVQCTVESFETALDSLVRTKETIG 868
Query: 880 RATRIAIDCAKFGVSSKVVEIVARHLESESSLYRRVDLFFLVDSIMQCSRGMK------- 932
RATR+A+D AKFGVS+K +EI+A LESES+L RRVDLFFLVDSI QCS+G+
Sbjct: 869 RATRLAMDLAKFGVSAKAMEILAHTLESESNLQRRVDLFFLVDSIAQCSKGLNGDAGGVY 928
Query: 933 --AILTVLPRLLSAAAPPGNVAQENRRQCLKVLRLWLERRILPESIIRHHMRELDTVTCX 990
+I +LPRLL+AA P G QENR+QCLKVLRLWLERRILPESI+RHH+RELD+++
Sbjct: 929 LSSIQAMLPRLLTAAVPAGATTQENRKQCLKVLRLWLERRILPESIVRHHIRELDSLS-N 987
Query: 991 XXXXXXXXXXXXTERALDDPVRDMEGMLVDEYGSNSSFQLPGFCMPRMLKXXXXXXXXXX 1050
TERALDDPVRDMEG+LVDEYGSNS+ QL GFC+P +L+
Sbjct: 988 VPACLYSRRSARTERALDDPVRDMEGILVDEYGSNSTLQLHGFCIPPILRDEDEGSDSDG 1047
Query: 1051 XXFEAVTPEHNSEIPEERDANPSM-KKHRHILEEVDGELEMEDVAPTCDNEMSSTVLVDI 1109
FE+VTPEH S EE PS+ ++H ILE+VDGELEMEDVAP + S++ + D
Sbjct: 1048 GDFESVTPEHESRSLEEH-VTPSITERHTRILEDVDGELEMEDVAPPWEGGSSASAITDQ 1106
Query: 1110 AQTSHDQLLSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSCAFSDSYSNGASMQNMQ 1169
A + + +S F Y SMQ
Sbjct: 1107 AD-NRESANCLLVPGTSHQNVTSSSPPARPSQNAQLAMSNSYSNGFD--YRRNPSMQGDY 1163
Query: 1170 NDGQQSVTQQ----SVAPRINSTVSTNAV--HYHASECRDHQMPMQMPESTSSFGCYS-M 1222
+ G + S P +S VS + S + P P YS M
Sbjct: 1164 HAGPPRMNPPMHYGSPEPSYSSRVSLSKSMPRGEGSNFQHRPYPSSHPPPPPPSHHYSYM 1223
Query: 1223 RPSNNFQQTDGPRFHNKPYPPRPPHAPQSNHFSYVQASQSAKSRREAPHPSNSHRFHPHP 1282
P ++ + R YP R + + + +Y + + + R E ++ R+HP P
Sbjct: 1224 EPDHHIKS----RREGLSYPHRSHYTLEFDERNYQDSYE--RMRPEPCENRDNWRYHP-P 1276
Query: 1283 NFDGGNFYNNHDRMKPGPYE-------HRESWRFSAPSFS-GPR-YPDEARECYPSGSYG 1333
+ G + HDR K GP++ HR+S R +S PR Y + Y S G
Sbjct: 1277 SSHGPRY---HDRHK-GPHQSSSYSGHHRDSGRLQNNRWSDSPRAYNNRHSYHYKQHSEG 1332
Query: 1334 G-P--LREPPRYSNR 1345
P +R+P + R
Sbjct: 1333 PVPVGMRDPGTWHQR 1347
Score = 285 (105.4 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 66/189 (34%), Positives = 93/189 (49%)
Query: 1196 YHASECRDHQMPMQMPESTSSFGCYSMRPSNNFQQTDGPRFHNKPYPP-RPPHAPQSNHF 1254
YHA R + PM S+ + S + + +G F ++PYP PP P S+H+
Sbjct: 1163 YHAGPPRMNP-PMHYGSPEPSYSS-RVSLSKSMPRGEGSNFQHRPYPSSHPPPPPPSHHY 1220
Query: 1255 SYVQASQSAKSRREAPHPSNSHRFHPHPNFDGGNFYNNHDRMKPGPYEHRESWRFSAPSF 1314
SY++ KSRRE S HR H FD N+ ++++RM+P P E+R++WR+ PS
Sbjct: 1221 SYMEPDHHIKSRREGL--SYPHRSHYTLEFDERNYQDSYERMRPEPCENRDNWRYHPPSS 1278
Query: 1315 SGPRYPDEARECYPSGSYGGPLREPPRYSNRGWA---YXXXXXXXXXXXXXSGGAVPVGI 1371
GPRY D + + S SY G R+ R N W+ S G VPVG+
Sbjct: 1279 HGPRYHDRHKGPHQSSSYSGHHRDSGRLQNNRWSDSPRAYNNRHSYHYKQHSEGPVPVGM 1338
Query: 1372 RAPGAWRPR 1380
R PG W R
Sbjct: 1339 RDPGTWHQR 1347
>TAIR|locus:2039351 [details] [associations]
symbol:AT2G48160 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] Pfam:PF00855 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0006397
GO:GO:0006351 EMBL:AC006072 InterPro:IPR000313 PROSITE:PS50812
InterPro:IPR006569 SMART:SM00582 PROSITE:PS51391 eggNOG:NOG256515
HOGENOM:HOG000176901 EMBL:AK117393 IPI:IPI00527486 PIR:B84924
RefSeq:NP_850485.2 UniGene:At.27581 ProteinModelPortal:F4IN78
SMR:F4IN78 PRIDE:F4IN78 EnsemblPlants:AT2G48160.1 GeneID:819428
KEGG:ath:AT2G48160 TAIR:At2g48160 InParanoid:Q8GYT7
PhylomeDB:F4IN78 Uniprot:F4IN78
Length = 1366
Score = 1274 (453.5 bits), Expect = 8.5e-162, Sum P(2) = 8.5e-162
Identities = 399/1145 (34%), Positives = 571/1145 (49%)
Query: 23 KVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEEK 82
KVGDLVLAKVKGFPAWPA VSEPEKW S D KKV V FFGTQQIAFCNP DVEAFTEE+
Sbjct: 23 KVGDLVLAKVKGFPAWPAVVSEPEKWDASPDSKKVFVHFFGTQQIAFCNPGDVEAFTEER 82
Query: 83 KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQV-DSNSGDELTVANGGNSVNSISHLK 141
KQSLLT+R +G+DFVRAV+EII+SYEKLK+Q++ D S +E T+ + N+ + +
Sbjct: 83 KQSLLTRRHAKGSDFVRAVKEIIESYEKLKQQERASDPKSAEEGTLGSAENT----TLMP 138
Query: 142 DRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAKAT 201
E AT +QM S D L ED+ A Q+ AL + ++ V K
Sbjct: 139 QVIEIPTATSLTQMNSDPSHGRDESTLLNEDASAAEQMLALRDNSGPRNKACDSAVVKEP 198
Query: 202 PVLTTYSSRKRSGGSRLQST--QRMAPSTRRSRSSTMVESCRLQNLMMPYNNEGKNAEGI 259
+ TYSSRKR+GG R Q+ Q +RS+S + +++ +LQ+ M+ N++G G
Sbjct: 199 RKIATYSSRKRNGGVRSQNCAPQNETCPVQRSKSPSRLQTEKLQSSMLQ-NSDG----GQ 253
Query: 260 SAKSILDGSLIRNKRTRKSPDGSECNDLDSSALMSNGSIEDNSSEIVTVESDAFSLNEGS 319
+ + DG+L R KR R+S SE +D+ +S+L S+GS E+N+SEI TVESD + NEG+
Sbjct: 254 TIDDVEDGALRREKRIRRSSGHSESDDVATSSLNSHGSDEENASEIATVESDN-NRNEGN 312
Query: 320 TVDSGCKVEDSETVLECLDGDEMLSKRLDFQIXXXXXXXXXXXXXXXXCNDAVDPPARIN 379
VDSG KVE + + L+GD L+K L+FQI +D VDP A++
Sbjct: 313 GVDSGSKVEQIDIGGKFLEGDYDLNKGLNFQINIMVKRKKRKPTRKRGTSDVVDPQAKVE 372
Query: 380 TATEVDVSTRNTCHSSENTGGNLDERDFKEDGDEHLPLVKRARVRMGKPXXXXXXXXXXX 439
+ RN +S+N+ ER +E+GDEHLPLVKRARVRM +
Sbjct: 373 GEAVPEAGARNNVQTSQNSHEKFTERPCEENGDEHLPLVKRARVRMSRAFYGNHEANSSL 432
Query: 440 XXXXPS-KDTAVNLVEHISPS--LNNYDEGFTEKG-----------------PSLVKEST 479
S KDT V+ SPS ++++D E+ PS V++S
Sbjct: 433 QAEERSPKDTVVSATAQTSPSDIISSHDTFAVEESKFFEVSAKLSGDMVNVAPSPVEKSH 492
Query: 480 DSVSPSKVCSEVSGNRPQLWKGTTNQSFGCSADGEAALPPSKRLHRALEAMSANAAEEGQ 539
D +SPS+ C + R + G S + D ++A P ++ +L A A A +
Sbjct: 493 DGMSPSEACVQTVRER-EYAMGWNELSK--TPDDKSAGPQYNQVS-SLPAGEAQTASVPE 548
Query: 540 ASV-QASSLINT-----SINGCCVNSI-CKCSHETVDSRERSGSGLQNVPTCDQLSENCN 592
A + L+ + ++ C V I TVDS + S + ++ QLS
Sbjct: 549 AVCPEVLKLLTSESDLPAVQYCQVAKIEPSMDPNTVDSSANNASEICSLSIPSQLSGQDR 608
Query: 593 SQKQESFRDDVGSVDNVDGKDLPGSPFSVHTIQTAVQTQTPVNILPDPKKRHSSFQLYQN 652
S Q++ S + ++ + +Q+ +P + L K+ + N
Sbjct: 609 SNDQDACVSLENSREYLNEEGSKIDACVAQVVQSEAIEHSPSSCLVVNKQETENMPKTVN 668
Query: 653 SLDQLSLKDEGSAEDLQLKDSRVENVDKEFNTSALVELSLDPVSGADESVKLSPQNGSNE 712
L LK EG L + + VE N P+S + V + NE
Sbjct: 669 ML----LK-EGHGS-LGEECAIVEPAQCTPNL---------PISATESDVIVGENVPLNE 713
Query: 713 LQYSVQGMSYENSESLKSQIDDNCHINARCEAVEEIKQNEKQKEMSSVSISDDHLGDK-G 771
+ + + E+S LK + N + ++++ N +SV +S++ +K
Sbjct: 714 IGCTKCEDAVEDSRQLKMIGETN-------DQKQQVQTN------NSVLVSENLSREKMS 760
Query: 772 VASVLFSSSPAEGVDSPARVSPP-NTSLCHVSTSESANIVQXXXXXPYARSQYKKSLGAP 830
+ + + +PA G + V +TS S ++ N P + K A
Sbjct: 761 FSPAITADTPARGTPHSSSVYYHISTS---ESANDMQNNSSGSPNIP--TGEKKNDCDAI 815
Query: 831 VADEGKVDTTLTQRPKSVG-KWSSCSEAHA-ALSSFEAVLGSLTRTKESIGRATRIAIDC 888
V +E K++T + Q K V S E++ AL S S+ R + +
Sbjct: 816 VKEEEKIETGVCQGQKVVSCDVQSTRESYEDALCSLVRTKESIGRATCLAMDLMKFGVSA 875
Query: 889 AKFGVSSKVVEIVARHLESESSLYRRVDLFFLVDSIMQCSRG---MKAILTVLPRLLSAA 945
+ + +E + +L+ L+ VD ++ G + AI +LPRLL+AA
Sbjct: 876 KAMEILAHTLESES-NLKRRVDLFFLVDSIAQCSKGLKGDTGCVYLSAIQVILPRLLAAA 934
Query: 946 APPGNVAQENRRQCLKVLRLWLERRILPESIIRHHMRELDTVTCXXXXXXXXXXXXXTER 1005
P G QENR+QCLKVL+LWLERRILPESI+RHH+RELD+ + TER
Sbjct: 935 VPAGATTQENRKQCLKVLKLWLERRILPESIVRHHIRELDSHSIVPACLYSRRSAR-TER 993
Query: 1006 ALDDPVRDMEGMLVDEYGSNSSFQLPGFCMPRMLKX------------XXXXXXXXXXXF 1053
+LDDPVRDME MLVDEYGSNS+ QLPGFCMP +LK F
Sbjct: 994 SLDDPVRDMEDMLVDEYGSNSTLQLPGFCMPALLKDEEGGSDSEGGCDSEGGSDSDGGDF 1053
Query: 1054 EAVTPEHNSEIPEERDANPSMKKHRHILEEVDGELEMEDVAPTCDNE-MSSTVLVDIAQT 1112
E+VTPEH S I EE ++ + ++H ILE+VDGELEMEDVAP E + T D +
Sbjct: 1054 ESVTPEHESRILEENVSSSTAERHTLILEDVDGELEMEDVAPPWGTENCTHTDQADNTKV 1113
Query: 1113 SHDQL 1117
S+ QL
Sbjct: 1114 SNCQL 1118
Score = 323 (118.8 bits), Expect = 8.5e-162, Sum P(2) = 8.5e-162
Identities = 88/238 (36%), Positives = 119/238 (50%)
Query: 1153 CAFSDSYSNGASMQNMQNDGQQSVT-QQSVAP-RINSTVSTNAVHYHASECRDHQMPMQM 1210
CA DSY NG +N G ++V Q P R+N +S + +HY Q
Sbjct: 1158 CAMPDSYLNG-----FENGGYRNVHGDQQAGPLRMNPPLSGSTMHY------------QG 1200
Query: 1211 PESTSSFGCYSMRPSNNFQQTDGPRFHNKPYP------PRPPHAPQSNHFSYVQASQSAK 1264
PES+ G ++ +N+ Q DG F ++PYP P PP P + FS+ + K
Sbjct: 1201 PESSYISG---VQLTNSIPQADGSNFQHRPYPSHPHPHPPPPPPPPQHQFSFREPGHVLK 1257
Query: 1265 SRREAPHPSNSHRFHPHPNFDGGNFYNNHDRMKPGPYEHRESWRFSAPSFSGPRYPDEAR 1324
S R+AP S SHR H PN D NF++NH+RM+ P+E+R++WR+ S G RY DE +
Sbjct: 1258 SHRDAP--SYSHRSHYVPNCDERNFHDNHERMRHAPFENRDNWRYPPSSSYGSRYQDEHK 1315
Query: 1325 ECYPSGSYGGPLRE-PPR-YSNRGWAYXXXXXXXXXXXXXSGGAVPVGIRAPGAWRPR 1380
YPS SY G + PPR Y+NR S G PVG+R PG W R
Sbjct: 1316 APYPSSSYNGVRWDNPPRQYNNRP---------SFHPKPHSEGPAPVGMRDPGMWHQR 1364
>TAIR|locus:2178292 [details] [associations]
symbol:HUA2 "ENHANCER OF AG-4 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0048497 "maintenance of floral organ
identity" evidence=IMP] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0009910 "negative regulation of flower development"
evidence=IMP] [GO:0048510 "regulation of timing of transition from
vegetative to reproductive phase" evidence=IMP] Pfam:PF00855
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154
GO:GO:0006397 EMBL:AB006708 GO:GO:0003700 GO:GO:0006351
GO:GO:0009910 GO:GO:0048510 Gene3D:1.25.40.90 InterPro:IPR008942
SUPFAM:SSF48464 InterPro:IPR000313 PROSITE:PS50812 EMBL:AB007648
InterPro:IPR006903 InterPro:IPR006569 Pfam:PF04818 SMART:SM00582
PROSITE:PS51391 EMBL:AF116556 EMBL:AB493755 IPI:IPI00530490
PIR:T51947 RefSeq:NP_197706.1 UniGene:At.11269
ProteinModelPortal:Q9XER9 SMR:Q9XER9 STRING:Q9XER9 PaxDb:Q9XER9
PRIDE:Q9XER9 EnsemblPlants:AT5G23150.1 GeneID:832379
KEGG:ath:AT5G23150 TAIR:At5g23150 eggNOG:NOG265390
HOGENOM:HOG000090612 InParanoid:Q9XER9 OMA:HSQKGIA PhylomeDB:Q9XER9
ProtClustDB:CLSN2716024 Genevestigator:Q9XER9 GO:GO:0048497
Uniprot:Q9XER9
Length = 1392
Score = 568 (205.0 bits), Expect = 1.0e-72, Sum P(4) = 1.0e-72
Identities = 138/297 (46%), Positives = 182/297 (61%)
Query: 841 LTQRPKSVGKWSSCS-EAHAALSSFEAVLGSLTRTKESIGRATRIAIDCAKFGVSSKVVE 899
L+ KSVG SCS EA + +FE +L +L+RT+ESIGRATR+AIDCAK+G++S+VVE
Sbjct: 755 LSSGHKSVGGSLSCSTEAAISRDAFEGMLETLSRTRESIGRATRLAIDCAKYGLASEVVE 814
Query: 900 IVARHLESESSLYRRVDLFFLVDSIMQCSRGMKAIL------TV---LPRLLSAAAPPGN 950
++ R LESES +R+VDLFFLVDSI Q S K I TV LPRLL AAAPPG
Sbjct: 815 LLIRKLESESHFHRKVDLFFLVDSITQHSHSQKGIAGASYVPTVQAALPRLLGAAAPPGT 874
Query: 951 VAQENRRQCLKVLRLWLERRILPESIIRHHMRELDTVTCXXXXXXXXXXXXXTERALDDP 1010
A +NRR+CLKVL+LWLER++ PES++R ++ ++ +ERA+DDP
Sbjct: 875 GASDNRRKCLKVLKLWLERKVFPESLLRRYIDDIRASGDDATGGFSLRRPSRSERAVDDP 934
Query: 1011 VRDMEGMLVDEYGSNSSFQLPGFCMPRMLKXXXXXXXXXXXXFEAVTP--EHNSEIPEER 1068
+R+MEGMLVDEYGSN++FQLPGF + E T E S + +
Sbjct: 935 IREMEGMLVDEYGSNATFQLPGFFSSHNFEDDEEDDDLPTSQKEKSTSAGERVSALDDLE 994
Query: 1069 DANPSMKKHRHILEEVDGELEMEDV-------APT--CDN---EMSSTVLVDIAQTS 1113
+ S K +LE+VD ELEMEDV AP+ C+N E S V+ +A+ S
Sbjct: 995 IHDTSSDKCHRVLEDVDHELEMEDVSGQRKDVAPSSFCENKTKEQSLDVMEPVAEKS 1051
Score = 252 (93.8 bits), Expect = 1.0e-72, Sum P(4) = 1.0e-72
Identities = 53/105 (50%), Positives = 69/105 (65%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
Q +GDLVLAKVKGFPAWPA +S PE W + D KK V FFGT++IAF P D++AFT
Sbjct: 17 QLVLGDLVLAKVKGFPAWPAKISRPEDWDRAPDPKKYFVQFFGTEEIAFVAPPDIQAFTS 76
Query: 81 EKKQSLLTKRQGRGAD-FVRAVQEIIDSYEKLKKQDQVDSNSGDE 124
E K LL + QG+ F +AV++I ++E L Q+ + GDE
Sbjct: 77 EAKSKLLARCQGKTVKYFAQAVEQICTAFEGL--QNHKSNALGDE 119
Score = 55 (24.4 bits), Expect = 1.0e-72, Sum P(4) = 1.0e-72
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 1205 QMPM-QMPESTSSFGCYSMRPSNNFQQTDGPRFHNKPYPPRPPHAPQSNH---FSYVQAS 1260
Q PM ++P + SS Y PS+ Q+ H P+PP+ A + + + +
Sbjct: 1256 QRPMVRLPSAPSSHFSY---PSHIQSQSQHSYTHPYPFPPQRDDARRYRNEEPWRIPSSG 1312
Query: 1261 QSAKSRREA-PHPSNSH 1276
SA+++ A H NSH
Sbjct: 1313 HSAENQNGAWIHGRNSH 1329
Score = 49 (22.3 bits), Expect = 1.0e-72, Sum P(4) = 1.0e-72
Identities = 37/175 (21%), Positives = 68/175 (38%)
Query: 173 SPAGRQLDALPAKEPLPEQPSENLVAKATPVLTTYSSRKRSGGSRLQSTQRMAPSTRRSR 232
S A ++LP +P+ E P +++ +L S K S L + + +A + +
Sbjct: 512 SNAENSTNSLPVVKPINELPPKDV----KQIL---QSPKMSPQLVL-TNKHVAGQHKVVK 563
Query: 233 SSTMVESCRLQNLMMPYNNEGKNAEGISAKSILDGSLIRNKRTRKSPDGSECNDLDSSAL 292
SS V + P ++ K A S K S N+R + + G + +A
Sbjct: 564 SSVKVSGVVMAK--KPQSDSCKEAVAGSDKISSSQSQPANQRHKSASVGERLTVVSKAAS 621
Query: 293 MSNGSIEDNSSEIVTVESDAFSLNEGSTVDSGCKVEDSETVLECLDGDEMLSKRL 347
N S + SE ++ + +GS + K DS ++ L ++L
Sbjct: 622 RLNDSGSRDMSEDLSAAMLDLNREKGSATFTSAKTPDSAASMKDLIAAAQAKRKL 676
Score = 45 (20.9 bits), Expect = 9.5e-51, Sum P(3) = 9.5e-51
Identities = 25/94 (26%), Positives = 40/94 (42%)
Query: 98 VRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHLKDRTE-ASEATLDSQMK 156
V +I S + Q ++ G+ LTV + S + S +D +E S A LD +
Sbjct: 586 VAGSDKISSSQSQPANQRHKSASVGERLTVVSKAASRLNDSGSRDMSEDLSAAMLDLNRE 645
Query: 157 PSNSTAGDGLNLPTEDSPAGRQ--LDALPAKEPL 188
++T + T DS A + + A AK L
Sbjct: 646 KGSATF---TSAKTPDSAASMKDLIAAAQAKRKL 676
Score = 43 (20.2 bits), Expect = 6.8e-15, Sum P(3) = 6.8e-15
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 1286 GGNFYNNHDRMKPGPYEHRESWRFSAPSFSGPR 1318
GGNF + + + + + ++PSFSG R
Sbjct: 370 GGNFQYDKEAVAYTKRQRQTMEHATSPSFSGSR 402
Score = 41 (19.5 bits), Expect = 6.9e-72, Sum P(4) = 6.9e-72
Identities = 24/102 (23%), Positives = 43/102 (42%)
Query: 209 SRKRSGGSRLQSTQRMAPSTRRSRSSTMVESCRLQNLMMPYNNEGKNAEGISAKSILDGS 268
SR +SG L+ R +P R+ + +S + + + Y+ + K+ L G
Sbjct: 401 SRDKSGKGHLEQKDRSSPV--RNVKAPAAQSLKKRRAVCIYDEDDDE----DPKTPLHGK 454
Query: 269 -LIRNKRTRKSPDGSE----CNDLDSSALMSNGSIEDNSSEI 305
I + DG + C+ + A +S GS E S+E+
Sbjct: 455 PAIVPQAASVLTDGPKRANVCHSTSTKAKISAGSTE--STEV 494
Score = 41 (19.5 bits), Expect = 6.9e-72, Sum P(4) = 6.9e-72
Identities = 37/157 (23%), Positives = 58/157 (36%)
Query: 472 PSLVKESTDSVSPSKVCSEVSGN-RPQLWKGTT--NQSFGCSADGEAAL--PPSKRLH-- 524
P + KE D + C+E GN + +L G ++ G GE + S H
Sbjct: 204 PKIKKEDFDKGTDGSACNEHFGNGQKKLANGKRIKKEAGGSDRKGEDTVHRDKSNNSHVP 263
Query: 525 --RALEAMSANAAEEGQASVQASSLINTSINGCCVNSI-CKCSHETVDSRERSGSGLQNV 581
R S + +G + + SS ++ + NS K R S G +
Sbjct: 264 GGRTASGNSDSKKSKGLLTEKTSSKVSADKHE---NSPGIKVGVSGKKRRLESEQG-KLA 319
Query: 582 PTCDQLSENCNSQKQESFRDDVG-SVDNVDGKDLPGS 617
P D+ S + ES + V +D DG D G+
Sbjct: 320 PRVDESSRAAKKPRCESADNKVKCEID--DGSDSTGT 354
Score = 40 (19.1 bits), Expect = 2.6e-15, Sum P(4) = 2.6e-15
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 169 PTEDSPAGRQLDALPAKEPLPEQPSENLVAK 199
P P L P+ P P PS++L +
Sbjct: 1105 PPPSQPPPPPLSPPPSPPPPPPPPSQSLTTQ 1135
Score = 39 (18.8 bits), Expect = 4.7e-71, Sum P(4) = 4.7e-71
Identities = 8/18 (44%), Positives = 8/18 (44%)
Query: 1234 PRFHNKPYPPRPPHAPQS 1251
P P PP PP P S
Sbjct: 1073 PPLPPSPPPPSPPLPPSS 1090
Score = 39 (18.8 bits), Expect = 3.3e-16, Sum P(4) = 3.3e-16
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 472 PSLVKESTDSVSPSKVCSEVSGNRPQLWKGTTNQSFGCS 510
P + + S SP+ VCS P + + FG S
Sbjct: 1198 PEYFVQQSSSFSPAGVCSS---REPSSFTSSRQLEFGNS 1233
Score = 38 (18.4 bits), Expect = 6.0e-71, Sum P(4) = 6.0e-71
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 1234 PRFHNKPYPPRPPHAP 1249
P+ P PP PP P
Sbjct: 1065 PQESPPPLPPLPPSPP 1080
Score = 38 (18.4 bits), Expect = 6.0e-71, Sum P(4) = 6.0e-71
Identities = 8/23 (34%), Positives = 9/23 (39%)
Query: 1230 QTDGPRFHNKPYPPRPPHAPQSN 1252
Q P P PP PP P +
Sbjct: 1109 QPPPPPLSPPPSPPPPPPPPSQS 1131
Score = 37 (18.1 bits), Expect = 1.8e-71, Sum P(4) = 1.8e-71
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 270 IRNKRTRKSPDGSECND 286
I+ + K DGS CN+
Sbjct: 206 IKKEDFDKGTDGSACNE 222
>TAIR|locus:2181569 [details] [associations]
symbol:AT5G08230 "AT5G08230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] Pfam:PF00855
GO:GO:0009506 GO:GO:0005634 EMBL:CP002688 GO:GO:0006355
GO:GO:0006397 GO:GO:0006351 EMBL:AL357612 InterPro:IPR000313
PROSITE:PS50812 InterPro:IPR006903 InterPro:IPR006569 Pfam:PF04818
SMART:SM00582 PROSITE:PS51391 HOGENOM:HOG000090612
ProtClustDB:CLSN2716024 EMBL:AK229633 IPI:IPI00547331 PIR:T50508
RefSeq:NP_196440.1 UniGene:At.22840 ProteinModelPortal:Q9LEY4
SMR:Q9LEY4 PRIDE:Q9LEY4 EnsemblPlants:AT5G08230.1 GeneID:830719
KEGG:ath:AT5G08230 TAIR:At5g08230 eggNOG:NOG316844
InParanoid:Q9LEY4 OMA:ENEERRF PhylomeDB:Q9LEY4 ArrayExpress:Q9LEY4
Genevestigator:Q9LEY4 Uniprot:Q9LEY4
Length = 1445
Score = 502 (181.8 bits), Expect = 2.3e-64, Sum P(4) = 2.3e-64
Identities = 163/485 (33%), Positives = 246/485 (50%)
Query: 640 PKKRHSSFQLYQNSLDQLSLKDEGSAEDLQLKDSRVENV--DKEFNTSAL-----VELSL 692
PKK H +S D ++ D S+ Q + R + +K +T + VE+S
Sbjct: 643 PKKYHGD-----SSKDVVAGSDRVSSSHSQTANQRSKPAFGEKPTSTPKVATRLDVEVSR 697
Query: 693 DP-VSGADESVKLSPQNGSNELQYSVQGMSYENSESLKSQIDDNCHINARCEAVEEIKQN 751
D V+ + + + ++ +NG+ L +S GMS +S +K I A + K+
Sbjct: 698 DTFVNLSADVIDVNQENGNAPL-FSF-GMSDSSSSCMKDLI-----------AAAQAKRK 744
Query: 752 EKQKEMSSVSISDDHLGDKGVASVLFSSSP--AEGVDSPARVSPPNTSLCHVSTSESANI 809
+ + S ++ DH + S+ S SP + V SPA + +L + E +
Sbjct: 745 QAHSQFSPF-VNLDH-NSLNIDSMQTSKSPFMVQNVSSPAA----DATL--IVAQEHQEV 796
Query: 810 VQXXXXXPYARSQYKKSLGAPVADEGKVDTTLTQRPKSVG-KWSSCSEAHAALSSFEAVL 868
+ P + S +E + + + +SVG S +EA + +FE ++
Sbjct: 797 L-----TPSNHGRQSSSSNQAGTEENE-ERRFSSGHRSVGGSLSGATEAAISRDTFEGMI 850
Query: 869 GSLTRTKESIGRATRIAIDCAKFGVSSKVVEIVARHLESESSLYRRVDLFFLVDSIMQCS 928
+L+RTKESI RATR+AIDCAK+G++++VVE++ R LE E R+VDLFFL+DSI+Q S
Sbjct: 851 ETLSRTKESIRRATRVAIDCAKYGIANEVVELLIRKLEIEPHFPRKVDLFFLLDSIIQSS 910
Query: 929 RGMKA------ILTV---LPRLLSAAAPPGNVAQENRRQCLKVLRLWLERRILPESIIRH 979
K I TV LPRLL AAAPPG A+ENR QC KVLRLWL+R+I P+ ++R
Sbjct: 911 HSQKGRARSLYIPTVQAALPRLLGAAAPPGTGARENRHQCRKVLRLWLKRKIFPDFLLRR 970
Query: 980 HMRELDTVTCXXXXXXXXXXXXXTERALDDPVRDMEGMLVDEYGSNSSFQLPGFCMPRML 1039
++ +L +ERA+DDP+RDMEGMLVDEYGSN++FQLPG+ L
Sbjct: 971 YIGDLGASGDDKTVGFSLRRPSRSERAVDDPLRDMEGMLVDEYGSNANFQLPGYLAS--L 1028
Query: 1040 KXXXXXXXXXXXXFEAVTPEH------NSEIPE----ERDANPSMKKHRHILEEVDGELE 1089
+ V H + E P + +A+ S H + +V+G LE
Sbjct: 1029 TFGDDEEEDLPSTSQEVKNTHMEVKITHMEEPVLALGKLEAHDSSSDKPHCVVDVNGGLE 1088
Query: 1090 MEDVA 1094
MED +
Sbjct: 1089 MEDAS 1093
Score = 244 (91.0 bits), Expect = 2.3e-64, Sum P(4) = 2.3e-64
Identities = 88/344 (25%), Positives = 146/344 (42%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
+ ++GDLVLAKVKGFPAWPA + +PE W + D KK V F+GT +I F P D++ FT
Sbjct: 17 EMRLGDLVLAKVKGFPAWPAKIGQPEDWNQAPDPKKHFVQFYGTGEIGFVTPPDIQPFTS 76
Query: 81 EKKQSLLTKRQGRGAD-FVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISH 139
E K+ L + QG+ F +AV+EI ++E+ +KQ G+E + SV +
Sbjct: 77 ETKKKLSARCQGKTVKYFSQAVEEISAAFEESQKQKS--DIVGNEALLNAVEPSVTKPKY 134
Query: 140 LKDRTEASEAT-LDSQMKP------SNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPE-Q 191
L + ++ S+ P N+ A ++ +DS + P+ EP+
Sbjct: 135 LNQASSDGKSDKFSSRADPCLGKLVENNGAEINPDVGEQDSSISNNRNTSPSSEPVEHGS 194
Query: 192 PSENLVAKATPVL--TTYSSRKRSGGSRLQSTQRMAPSTRRSRSSTMVESCRLQNLMMPY 249
P L + T + G+ L + QR+ T + + R + + P
Sbjct: 195 PDPILKVAVDDKIDNVTCTDHSDGTGNNLVNDQRIIRKTTDDSNKRCKDEVRAKRV--PD 252
Query: 250 NNEGKNAEGISAKSILDGSLI-RNKRTRKSPD-GSECNDLDSSALMS-NGSIEDNSSEIV 306
+ + + L GS+ ++ ++K D G DS + N + E++
Sbjct: 253 SRAATDNHILGPNQKLKGSIKGQDHGSKKGQDHGCRKESSDSKVVTDLNIASSKKPKELL 312
Query: 307 TVESDAFSLNEG---STVDSGCKVEDSETVLECLDGDEMLSKRL 347
+ F G S D + + D + SKRL
Sbjct: 313 KEKKKRFENELGKSASGADESKRAAKRPRSEDAKDQKQCKSKRL 356
Score = 56 (24.8 bits), Expect = 2.3e-64, Sum P(4) = 2.3e-64
Identities = 26/94 (27%), Positives = 33/94 (35%)
Query: 1248 APQSNHFSY-VQASQSAKSRREAPHPSNSHRFHPHPNFDGGNFYNNHDRMKPGPYEHRES 1306
AP S+HF + QS R PHP + F P DG N RM P
Sbjct: 1318 AP-SSHFPLPCRIVQSEPQRSSFPHP---YHFPSQP-VDGRQHMNEEWRMPPNGCSADPQ 1372
Query: 1307 WRFSAPSFSGPRYPDEARECYPSGSYGGPLREPP 1340
+ ++ G R P G + P PP
Sbjct: 1373 YG----AWIGVRNPFPGSRTVTDGVFQPPPERPP 1402
Score = 48 (22.0 bits), Expect = 2.3e-64, Sum P(4) = 2.3e-64
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 1200 ECRDHQMPMQMPESTSSFGCYSMRPSNNFQQTDGPRFHNKPY--PPRPPHAP 1249
+ +D ++ E + + C + PS F P H P PP+PP +P
Sbjct: 1095 QLKDDVCGIEAKEDSPATTCATELPS--FPAGSPPLPHESPPSPPPQPPSSP 1144
>UNIPROTKB|Q9Y3E1 [details] [associations]
symbol:HDGFRP3 "Hepatoma-derived growth factor-related
protein 3" species:9606 "Homo sapiens" [GO:0008083 "growth factor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
Pfam:PF00855 GO:GO:0005634 GO:GO:0005737 GO:GO:0008283
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
HOGENOM:HOG000112874 HOVERGEN:HBG010574 EMBL:AB029156 EMBL:AF110642
EMBL:AF151900 EMBL:AK001280 EMBL:BC015483 IPI:IPI00007063
PIR:JC7163 RefSeq:NP_057157.1 UniGene:Hs.513954
ProteinModelPortal:Q9Y3E1 SMR:Q9Y3E1 IntAct:Q9Y3E1 STRING:Q9Y3E1
PhosphoSite:Q9Y3E1 DMDM:68052386 PaxDb:Q9Y3E1 PeptideAtlas:Q9Y3E1
PRIDE:Q9Y3E1 DNASU:50810 GeneID:50810 KEGG:hsa:50810
UCSC:uc002bjs.1 CTD:50810 GeneCards:GC15M083784 HPA:HPA040719
neXtProt:NX_Q9Y3E1 eggNOG:NOG273102 InParanoid:Q9Y3E1 OMA:NEKGGSK
OrthoDB:EOG40VVQS PhylomeDB:Q9Y3E1 GenomeRNAi:50810 NextBio:53254
Bgee:Q9Y3E1 Genevestigator:Q9Y3E1 GermOnline:ENSG00000166503
Uniprot:Q9Y3E1
Length = 203
Score = 164 (62.8 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 52/169 (30%), Positives = 74/169 (43%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
++K GDLV AK+KG+P WPA + E + K +FFFGT + AF P D+ + E
Sbjct: 8 EYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKE 67
Query: 81 EK-KQSLLTKRQGRGADFVRAVQEIIDSYE-KLKKQDQVDSNSGDELTVANGGNSVNSIS 138
K K KR+G F + EI ++ K + S E T GGN+ ++ S
Sbjct: 68 YKDKFGKSNKRKG----FNEGLWEIENNPGVKFTGYQAIQQQSSSE-TEGEGGNTADASS 122
Query: 139 HLK-DRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKE 186
+ DR E D + K N AG + +Q P E
Sbjct: 123 EEEGDRVEE-----DGKGKRKNEKAGSKRKKSYTSKKSSKQSRKSPGDE 166
Score = 46 (21.3 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 272 NKRTRKSP---DGSECNDLDSSALMSNGSIEDNSSEIVTVESDAFSLNEGS 319
+K++RKSP D +C + ++ + S G N + T SD +EG+
Sbjct: 156 SKQSRKSPGDEDDKDCKEEENKS-SSEGGDAGNDTRNTT--SDLQKTSEGT 203
>RGD|628773 [details] [associations]
symbol:Hdgfrp3 "hepatoma-derived growth factor, related protein
3" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0008083 "growth factor activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] Pfam:PF00855 RGD:628773 GO:GO:0005634
GO:GO:0005737 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
HOGENOM:HOG000112874 HOVERGEN:HBG010574 CTD:50810 eggNOG:NOG273102
OrthoDB:EOG40VVQS EMBL:AF389347 IPI:IPI00204130 RefSeq:NP_665728.1
UniGene:Rn.17383 ProteinModelPortal:Q923W4 SMR:Q923W4 STRING:Q923W4
PhosphoSite:Q923W4 GeneID:252941 KEGG:rno:252941 UCSC:RGD:628773
InParanoid:Q923W4 NextBio:624115 ArrayExpress:Q923W4
Genevestigator:Q923W4 Uniprot:Q923W4
Length = 202
Score = 159 (61.0 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 44/128 (34%), Positives = 63/128 (49%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
++K GDLV AK+KG+P WPA + E + K +FFFGT + AF P D+ + E
Sbjct: 8 EYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKE 67
Query: 81 EK-KQSLLTKRQGRGADFVRAVQEIIDSYE-KLKKQDQVDSNSGDELTVANGGNSVNSIS 138
K K KR+G F + EI ++ K + S E T GGN+ ++ S
Sbjct: 68 YKDKFGKSNKRKG----FNEGLWEIENNPGVKFTGYQTIQQQSSSE-TEGEGGNTADASS 122
Query: 139 HLK-DRTE 145
+ DR E
Sbjct: 123 EEEGDRVE 130
Score = 51 (23.0 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 254 KNAEGISAKSILDGSLIRNKRTRKSP---DGSECNDLDSSALMSNGSIEDNSSEIVTVES 310
KN +G S + S +K++RKSP D +C + ++ + S G N + T S
Sbjct: 137 KNEKGGSKRKKSYTSKKSSKQSRKSPGDEDDKDCKEEENKS-SSEGGDAGNDTRNTT--S 193
Query: 311 DAFSLNEGS 319
D EG+
Sbjct: 194 DLQKAGEGT 202
>MGI|MGI:1352760 [details] [associations]
symbol:Hdgfrp3 "hepatoma-derived growth factor, related
protein 3" species:10090 "Mus musculus" [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008083 "growth factor
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] MGI:MGI:1352760 Pfam:PF00855 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0003682 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 HOGENOM:HOG000112874
HOVERGEN:HBG010574 GeneTree:ENSGT00530000063013 CTD:50810
eggNOG:NOG273102 OMA:NEKGGSK OrthoDB:EOG40VVQS EMBL:AB029493
EMBL:AK019487 EMBL:AK044858 EMBL:AK045542 EMBL:AK051401
EMBL:AK162418 EMBL:BC055734 IPI:IPI00224067 IPI:IPI00608040
RefSeq:NP_038914.2 UniGene:Mm.392934 PDB:1N27 PDBsum:1N27
ProteinModelPortal:Q9JMG7 SMR:Q9JMG7 PhosphoSite:Q9JMG7
PaxDb:Q9JMG7 PRIDE:Q9JMG7 Ensembl:ENSMUST00000026094
Ensembl:ENSMUST00000107305 GeneID:29877 KEGG:mmu:29877
UCSC:uc009icr.1 UCSC:uc009ics.1 InParanoid:Q9JMG7
EvolutionaryTrace:Q9JMG7 NextBio:307118 Bgee:Q9JMG7
CleanEx:MM_HDGFRP3 Genevestigator:Q9JMG7 Uniprot:Q9JMG7
Length = 202
Score = 159 (61.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 44/128 (34%), Positives = 63/128 (49%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
++K GDLV AK+KG+P WPA + E + K +FFFGT + AF P D+ + E
Sbjct: 8 EYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKE 67
Query: 81 EK-KQSLLTKRQGRGADFVRAVQEIIDSYE-KLKKQDQVDSNSGDELTVANGGNSVNSIS 138
K K KR+G F + EI ++ K + S E T GGN+ ++ S
Sbjct: 68 YKDKFGKSNKRKG----FNEGLWEIENNPGVKFTGYQTIQQQSSSE-TEGEGGNTADASS 122
Query: 139 HLK-DRTE 145
+ DR E
Sbjct: 123 EEEGDRVE 130
Score = 48 (22.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 254 KNAEGISAKSILDGSLIRNKRTRKSP---DGSECNDLDSSALMSNGSIEDNSSEIVTVES 310
KN +G S + S +K++RKSP D +C + ++ + S G N + T +
Sbjct: 137 KNEKGGSKRKKSYTSKKSSKQSRKSPGDEDDKDCKEEENKS-SSEGGDAGNDTRNTT--A 193
Query: 311 DAFSLNEGS 319
D EG+
Sbjct: 194 DLQKAGEGT 202
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 217 (81.4 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 154/835 (18%), Positives = 326/835 (39%)
Query: 76 EAFTEEKKQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVN 135
E + K S ++ ++ + + E++ S ++ +V S+S + ++ ++ +S +
Sbjct: 154 EVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSS 213
Query: 136 SI-SHLKDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSE 194
+ S + + +SE + S++ S+ + + + + + + + S
Sbjct: 214 EVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSS--SS 271
Query: 195 NLVAKATPVLTTYSSRKRSGGSRLQSTQRMAPSTRRSRSSTMVESCRLQNLMMPYNNEGK 254
+V+ ++ V SS + S S + S+ ++ S+ S SS ++ S ++ +
Sbjct: 272 EVVSSSSEVS---SSSEVSSSSEVSSSSEVSSSSEVSSSSQVISS---SEVVSSSSEVVS 325
Query: 255 NAEGISAKSILDGSLIRNKRTRKSPDGSECNDLDSSALMSNGSIEDNSSEIVTVESDAFS 314
++ +S+ S + S ++ S + S +++ SS+ +S+ S +SSEIV+ S+ S
Sbjct: 326 SSSEVSSSSEVSSS---SEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSS 382
Query: 315 LNEGSTVDSGCKVEDSETVLECLDGDEMLSKRLDFQIXXXXXXXXXXXXXXXXCNDAVDP 374
+ V S +V S V+ E+ S ++ + V
Sbjct: 383 -SSSEVVSSSSEVSSSSEVVS--SSSEVSSSS---EVSSSSEVSSSSEVSS---SSEVSS 433
Query: 375 PARINTATEVDVSTRNTCHSSENTGGNLDERDFKEDGDEHLPLVKRARVRMGKPXXXXXX 434
+++ +++EV VS+ + SS + E + + ++V
Sbjct: 434 SSQVISSSEV-VSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSS 492
Query: 435 XXXXXXXXXPSKDTAVNLVEHISPSLNNYDEGFTEKGPSLVKESTDSVSPSKVCS---EV 491
S + V+ + S + S V S+ +S S++ S EV
Sbjct: 493 EVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEV 552
Query: 492 SGNRPQLWKGTTNQSFGCSA-DGEAALPPSKRLHRALEAMSANAAEEGQASVQASSLINT 550
S + ++ ++ S + + S + + E S++ V +SS + +
Sbjct: 553 SSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVS 612
Query: 551 SINGCCVNSICKCSHETVDSRERSGSGLQNVPTCDQL---SE--NCNSQKQESFRDDVGS 605
S + +S S E S E S S V + Q+ SE + +S+ S + V S
Sbjct: 613 SSSEVSSSSEVSSSSEVSSSSEVSSSS--EVSSSSQVTSSSEIVSSSSEVSSSSSEVVSS 670
Query: 606 VDNVDGKDLPGSPFSVHTIQTAVQTQTPVNILPDPKKRHSSFQLYQNSLDQLSLKDEGSA 665
V S S + + V + + V+ + SS ++ +S + +S E S+
Sbjct: 671 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVS---SSSQVISSSEVVSSSSEVVSSSSEVSS 727
Query: 666 EDLQLKDSRVENVDKEFNTSALVELSLDPVSGADESVKLSPQN---GSNELQYSVQGMSY 722
S V + E ++S+ V S + S + E + S + S+E+ S Q S
Sbjct: 728 SSEVSSSSEVSS-SSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATS- 785
Query: 723 ENSE--SLKSQIDDNCHINARCEAVEEIKQ-NEKQKEMSSVSISDDHLGDKGVASVLFSS 779
+SE S S++ + I + E + + N E+ S S + + + S
Sbjct: 786 SSSEIISSSSKVSSSSEITSSSECISSTSEVNSSSSEVVSSSSASSEVVSSSTECI---S 842
Query: 780 SPAEGVDSPARVSPPNTSLCHVSTSESANIVQXXXXXPYARSQYKKSLGAPVADEGKVDT 839
S +E + S ++V+ +T C S+SE + + S + + + +
Sbjct: 843 SSSEAISSSSQVTSSSTE-CISSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSE-QI 900
Query: 840 TLTQRPKSVGKWSSCSEAHAALSSFEAVLGSLTRTKESIGRATRIAIDCAKFGVS 894
+ ++ S ++ S S H++LSS E+ T T T + C G S
Sbjct: 901 SSSESTSSCSEFVSKSSEHSSLSS-ESCPSEETSTVSETSSET---VTCKHHGCS 951
Score = 166 (63.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 137/693 (19%), Positives = 254/693 (36%)
Query: 227 STRRSRSSTMVESCRLQNLMMPYNNEGKNAEGISAKSILDGSLIRNKRTRKSPDGSECND 286
S+ S SS+ S ++ + E ++E S+ I S + + S SE
Sbjct: 93 SSSSSSSSSSTVSSSSSEVISSSSEEASSSEITSSSEISSSSEVSSSSEVLS--SSEIIS 150
Query: 287 LDSSALMSNGSIEDNSSEIVTVESDAFSLNEGSTVDSGCKVEDSETVLECLDGDEMLSKR 346
SS ++S+ S +SSE + S+ S + V S +V S V+ S
Sbjct: 151 -SSSEVVSSSSKVSSSSEATSSSSEIIS-SSSEVVSSSSQVTSSSEVVSSSSEVVSSSSE 208
Query: 347 LDFQIXXXXXXXXXXXXXXXXCNDAVDPPARINTATEVDVSTRNTCHSSENTGGNLDERD 406
+ + V +++ +++E+ S+ SS + E
Sbjct: 209 VSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVS 268
Query: 407 FKEDGDEHLPLVKRARVRMGKPXXXXXXXXXXXXXXXPSKDTAVNLVEHISPSLNNYDEG 466
+ V + + S ++ E +S S
Sbjct: 269 SSSEVVSSSSEVSSSS-EVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSS 327
Query: 467 FTEKGPSLVKESTDSVSPSKVCSEVSGNRPQLWKGTTNQSFGCSADGEAALPPSKRLHRA 526
S V S++ VS S SEVS + + S ++ E S+ +
Sbjct: 328 SEVSSSSEVSSSSEVVSSS---SEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSS 384
Query: 527 LEAMSANAAEEGQASVQASSLINTSINGCCVNSICKCSHETVDSRERSGSG--LQNVPTC 584
E +S+++ + V +SS +S + +S S E S E S S + +
Sbjct: 385 SEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVV 444
Query: 585 DQLSENCNSQKQESFRDDVGSVDNVDGKDLPGSPFSVHTIQTAVQTQTPVNILPDPKKRH 644
SE +S + S +V S V S V + V + + V+ +
Sbjct: 445 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVS--SSSSEVV 502
Query: 645 SSFQLYQNSLDQLSLKDEGSAEDLQLKDSRVENVDKEFNTSALVELSLDPVSGADESVKL 704
SS +S + +S E S+ S V + + ++S +V S + S + E V
Sbjct: 503 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSS 562
Query: 705 SPQ-NGSNELQYSVQGMSYENSESLKSQIDDNCHINARCEAVEEIKQNEKQKEMSSVSIS 763
S + + S+E+ S +S + S S++ + + + E V +E S VS S
Sbjct: 563 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSS--SSEVVSSSSEVSSS 620
Query: 764 DDHLGDKGVASVLFSSSPAEGVDSPARVSPPN---TSLCHVSTSES---ANIVQXXXXXP 817
+ V+S SS +E V S ++V+ + +S VS+S S ++ +
Sbjct: 621 SEVSSSSEVSSSSEVSSSSE-VSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSE 679
Query: 818 YARSQYKKSLGAPVADEGKVDTTLTQRPKSVGKWSSCSEAHAALSSFEAVLGSLTRTKES 877
S + S + V+ +V ++ +Q S SS SE + SS E S +
Sbjct: 680 VVSSSSEVSSSSEVSSSSEVSSS-SQVISSSEVVSSSSEVVS--SSSEVSSSSEVSSSSE 736
Query: 878 IGRATRIAIDCAKFGVSSKVVEIVARHLESESS 910
+ ++ ++ ++ SS+V + + S SS
Sbjct: 737 VSSSSEVS-SSSEVSSSSEVTSSSSEIISSSSS 768
Score = 40 (19.1 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 1167 NMQNDGQQSVTQQSVAPRINSTVSTNAVH 1195
N++ G + +T+QS P + + VH
Sbjct: 1285 NVEVIGNKVITKQSGKPIVEEQTTNGIVH 1313
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 217 (81.4 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 154/835 (18%), Positives = 326/835 (39%)
Query: 76 EAFTEEKKQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVN 135
E + K S ++ ++ + + E++ S ++ +V S+S + ++ ++ +S +
Sbjct: 154 EVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSS 213
Query: 136 SI-SHLKDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSE 194
+ S + + +SE + S++ S+ + + + + + + + S
Sbjct: 214 EVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSS--SS 271
Query: 195 NLVAKATPVLTTYSSRKRSGGSRLQSTQRMAPSTRRSRSSTMVESCRLQNLMMPYNNEGK 254
+V+ ++ V SS + S S + S+ ++ S+ S SS ++ S ++ +
Sbjct: 272 EVVSSSSEVS---SSSEVSSSSEVSSSSEVSSSSEVSSSSQVISS---SEVVSSSSEVVS 325
Query: 255 NAEGISAKSILDGSLIRNKRTRKSPDGSECNDLDSSALMSNGSIEDNSSEIVTVESDAFS 314
++ +S+ S + S ++ S + S +++ SS+ +S+ S +SSEIV+ S+ S
Sbjct: 326 SSSEVSSSSEVSSS---SEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSS 382
Query: 315 LNEGSTVDSGCKVEDSETVLECLDGDEMLSKRLDFQIXXXXXXXXXXXXXXXXCNDAVDP 374
+ V S +V S V+ E+ S ++ + V
Sbjct: 383 -SSSEVVSSSSEVSSSSEVVS--SSSEVSSSS---EVSSSSEVSSSSEVSS---SSEVSS 433
Query: 375 PARINTATEVDVSTRNTCHSSENTGGNLDERDFKEDGDEHLPLVKRARVRMGKPXXXXXX 434
+++ +++EV VS+ + SS + E + + ++V
Sbjct: 434 SSQVISSSEV-VSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSS 492
Query: 435 XXXXXXXXXPSKDTAVNLVEHISPSLNNYDEGFTEKGPSLVKESTDSVSPSKVCS---EV 491
S + V+ + S + S V S+ +S S++ S EV
Sbjct: 493 EVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEV 552
Query: 492 SGNRPQLWKGTTNQSFGCSA-DGEAALPPSKRLHRALEAMSANAAEEGQASVQASSLINT 550
S + ++ ++ S + + S + + E S++ V +SS + +
Sbjct: 553 SSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVS 612
Query: 551 SINGCCVNSICKCSHETVDSRERSGSGLQNVPTCDQL---SE--NCNSQKQESFRDDVGS 605
S + +S S E S E S S V + Q+ SE + +S+ S + V S
Sbjct: 613 SSSEVSSSSEVSSSSEVSSSSEVSSSS--EVSSSSQVTSSSEIVSSSSEVSSSSSEVVSS 670
Query: 606 VDNVDGKDLPGSPFSVHTIQTAVQTQTPVNILPDPKKRHSSFQLYQNSLDQLSLKDEGSA 665
V S S + + V + + V+ + SS ++ +S + +S E S+
Sbjct: 671 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVS---SSSQVISSSEVVSSSSEVVSSSSEVSS 727
Query: 666 EDLQLKDSRVENVDKEFNTSALVELSLDPVSGADESVKLSPQN---GSNELQYSVQGMSY 722
S V + E ++S+ V S + S + E + S + S+E+ S Q S
Sbjct: 728 SSEVSSSSEVSS-SSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATS- 785
Query: 723 ENSE--SLKSQIDDNCHINARCEAVEEIKQ-NEKQKEMSSVSISDDHLGDKGVASVLFSS 779
+SE S S++ + I + E + + N E+ S S + + + S
Sbjct: 786 SSSEIISSSSKVSSSSEITSSSECISSTSEVNSSSSEVVSSSSASSEVVSSSTECI---S 842
Query: 780 SPAEGVDSPARVSPPNTSLCHVSTSESANIVQXXXXXPYARSQYKKSLGAPVADEGKVDT 839
S +E + S ++V+ +T C S+SE + + S + + + +
Sbjct: 843 SSSEAISSSSQVTSSSTE-CISSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSE-QI 900
Query: 840 TLTQRPKSVGKWSSCSEAHAALSSFEAVLGSLTRTKESIGRATRIAIDCAKFGVS 894
+ ++ S ++ S S H++LSS E+ T T T + C G S
Sbjct: 901 SSSESTSSCSEFVSKSSEHSSLSS-ESCPSEETSTVSETSSET---VTCKHHGCS 951
Score = 166 (63.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 137/693 (19%), Positives = 254/693 (36%)
Query: 227 STRRSRSSTMVESCRLQNLMMPYNNEGKNAEGISAKSILDGSLIRNKRTRKSPDGSECND 286
S+ S SS+ S ++ + E ++E S+ I S + + S SE
Sbjct: 93 SSSSSSSSSSTVSSSSSEVISSSSEEASSSEITSSSEISSSSEVSSSSEVLS--SSEIIS 150
Query: 287 LDSSALMSNGSIEDNSSEIVTVESDAFSLNEGSTVDSGCKVEDSETVLECLDGDEMLSKR 346
SS ++S+ S +SSE + S+ S + V S +V S V+ S
Sbjct: 151 -SSSEVVSSSSKVSSSSEATSSSSEIIS-SSSEVVSSSSQVTSSSEVVSSSSEVVSSSSE 208
Query: 347 LDFQIXXXXXXXXXXXXXXXXCNDAVDPPARINTATEVDVSTRNTCHSSENTGGNLDERD 406
+ + V +++ +++E+ S+ SS + E
Sbjct: 209 VSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVS 268
Query: 407 FKEDGDEHLPLVKRARVRMGKPXXXXXXXXXXXXXXXPSKDTAVNLVEHISPSLNNYDEG 466
+ V + + S ++ E +S S
Sbjct: 269 SSSEVVSSSSEVSSSS-EVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSS 327
Query: 467 FTEKGPSLVKESTDSVSPSKVCSEVSGNRPQLWKGTTNQSFGCSADGEAALPPSKRLHRA 526
S V S++ VS S SEVS + + S ++ E S+ +
Sbjct: 328 SEVSSSSEVSSSSEVVSSS---SEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSS 384
Query: 527 LEAMSANAAEEGQASVQASSLINTSINGCCVNSICKCSHETVDSRERSGSG--LQNVPTC 584
E +S+++ + V +SS +S + +S S E S E S S + +
Sbjct: 385 SEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVV 444
Query: 585 DQLSENCNSQKQESFRDDVGSVDNVDGKDLPGSPFSVHTIQTAVQTQTPVNILPDPKKRH 644
SE +S + S +V S V S V + V + + V+ +
Sbjct: 445 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVS--SSSSEVV 502
Query: 645 SSFQLYQNSLDQLSLKDEGSAEDLQLKDSRVENVDKEFNTSALVELSLDPVSGADESVKL 704
SS +S + +S E S+ S V + + ++S +V S + S + E V
Sbjct: 503 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSS 562
Query: 705 SPQ-NGSNELQYSVQGMSYENSESLKSQIDDNCHINARCEAVEEIKQNEKQKEMSSVSIS 763
S + + S+E+ S +S + S S++ + + + E V +E S VS S
Sbjct: 563 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSS--SSEVVSSSSEVSSS 620
Query: 764 DDHLGDKGVASVLFSSSPAEGVDSPARVSPPN---TSLCHVSTSES---ANIVQXXXXXP 817
+ V+S SS +E V S ++V+ + +S VS+S S ++ +
Sbjct: 621 SEVSSSSEVSSSSEVSSSSE-VSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSE 679
Query: 818 YARSQYKKSLGAPVADEGKVDTTLTQRPKSVGKWSSCSEAHAALSSFEAVLGSLTRTKES 877
S + S + V+ +V ++ +Q S SS SE + SS E S +
Sbjct: 680 VVSSSSEVSSSSEVSSSSEVSSS-SQVISSSEVVSSSSEVVS--SSSEVSSSSEVSSSSE 736
Query: 878 IGRATRIAIDCAKFGVSSKVVEIVARHLESESS 910
+ ++ ++ ++ SS+V + + S SS
Sbjct: 737 VSSSSEVS-SSSEVSSSSEVTSSSSEIISSSSS 768
Score = 40 (19.1 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 1167 NMQNDGQQSVTQQSVAPRINSTVSTNAVH 1195
N++ G + +T+QS P + + VH
Sbjct: 1285 NVEVIGNKVITKQSGKPIVEEQTTNGIVH 1313
>ZFIN|ZDB-GENE-050213-2 [details] [associations]
symbol:hdgfrp3 "hepatoma-derived growth factor,
related protein 3" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00855 ZFIN:ZDB-GENE-050213-2 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 HOVERGEN:HBG010574 CTD:50810
eggNOG:NOG273102 EMBL:BC090065 IPI:IPI00554355
RefSeq:NP_001012372.1 UniGene:Dr.78250 ProteinModelPortal:Q5FVD1
SMR:Q5FVD1 PRIDE:Q5FVD1 GeneID:497284 KEGG:dre:497284
NextBio:20865921 Uniprot:Q5FVD1
Length = 201
Score = 159 (61.0 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 45/134 (33%), Positives = 63/134 (47%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
++K GDLV AK+KG+P WPA + E + K +FFFGT + AF P D+ + +
Sbjct: 8 EYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKD 67
Query: 81 EK-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISH 139
K K KR+G F + EI ++ QV S E T GGN+ + S
Sbjct: 68 YKDKFGKSNKRKG----FNEGLWEIENNPGVKFTGFQVMQQSSSE-TEGEGGNAADGSSD 122
Query: 140 LKDRTEASEATLDS 153
E EA + S
Sbjct: 123 GDSAAEEDEAQMKS 136
Score = 37 (18.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 229 RRSRSSTMVESCRLQNLMMPYNNEGKNAEGISAKSILDGSLIRNKRTRKSP 279
++S SS + + CR + +GK+ + +++ + I+N + SP
Sbjct: 144 KKSTSSKVSKQCRKGSGDEDLERDGKDEQKSGSEAGDHDNNIQNSSDKTSP 194
>UNIPROTKB|P51858 [details] [associations]
symbol:HDGF "Hepatoma-derived growth factor" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008083 "growth factor
activity" evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006987
"activation of signaling protein activity involved in unfolded
protein response" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0001222 "transcription corepressor binding"
evidence=IPI] EMBL:D16431 Pfam:PF00855 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0017053 GO:GO:0005615 GO:GO:0006987
GO:GO:0000166 GO:GO:0003677 GO:GO:0008283 GO:GO:0008201
EMBL:CH471121 GO:GO:0001106 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 CTD:3068 eggNOG:NOG240243 HOGENOM:HOG000112874
HOVERGEN:HBG010574 KO:K16641 OrthoDB:EOG4PK28W EMBL:AK096411
EMBL:AL590666 EMBL:BC018991 IPI:IPI00020956 IPI:IPI00514330
PIR:A55055 RefSeq:NP_001119522.1 RefSeq:NP_001119523.1
RefSeq:NP_004485.1 UniGene:Hs.741151 PDB:1RI0 PDB:2NLU PDBsum:1RI0
PDBsum:2NLU ProteinModelPortal:P51858 SMR:P51858 IntAct:P51858
STRING:P51858 PhosphoSite:P51858 DMDM:1708157 PaxDb:P51858
PeptideAtlas:P51858 PRIDE:P51858 DNASU:3068 Ensembl:ENST00000357325
Ensembl:ENST00000368209 Ensembl:ENST00000537739 GeneID:3068
KEGG:hsa:3068 UCSC:uc001fpy.4 GeneCards:GC01M156711 HGNC:HGNC:4856
HPA:CAB026035 MIM:600339 neXtProt:NX_P51858 PharmGKB:PA29234
PhylomeDB:P51858 ChiTaRS:HDGF EvolutionaryTrace:P51858
GenomeRNAi:3068 NextBio:12137 ArrayExpress:P51858 Bgee:P51858
CleanEx:HS_HDGF Genevestigator:P51858 GermOnline:ENSG00000143321
Uniprot:P51858
Length = 240
Score = 167 (63.8 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 55/192 (28%), Positives = 86/192 (44%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
++K GDLV AK+KG+P WPA + E + + K VFFFGT + AF P D+ + E
Sbjct: 9 EYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEE 68
Query: 81 EKKQ-SLLTKRQG--RGADFVRAVQEIIDS-YEKLKKQDQVDSNSGDELTVANGGNSVNS 136
K++ KR+G G + + S Y+ +K+ V+ + G+ +
Sbjct: 69 SKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQSSQKKSCVEEPEPEPEAAEGDGDKKGN 128
Query: 137 ISHLKDRTEASEATLDSQMKPSNST------AGDGLN----LPTE-DSPAGRQLDA--LP 183
D E + +D K N AGD L P E ++P G + +A L
Sbjct: 129 AEGSSD--EEGKLVIDEPAKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEEKEAATLE 186
Query: 184 AKEPLPEQPSEN 195
+ PLP + +N
Sbjct: 187 VERPLPMEVEKN 198
>UNIPROTKB|F1SMR3 [details] [associations]
symbol:PSIP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034399 "nuclear periphery" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0009408
"response to heat" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0000395 "mRNA 5'-splice site recognition"
evidence=IEA] Pfam:PF00855 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0034399
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GeneTree:ENSGT00530000063013 GO:GO:0000395 CTD:11168 EMBL:CU075375
RefSeq:NP_001230599.1 UniGene:Ssc.2868 Ensembl:ENSSSCT00000005714
GeneID:100157597 KEGG:ssc:100157597 OMA:KHEASSK Uniprot:F1SMR3
Length = 333
Score = 167 (63.8 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 57/200 (28%), Positives = 88/200 (44%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S A N+ + +
Sbjct: 65 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQAS--------AKQSNASSDVEVE 111
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPA-GRQLDALPAKEPLPEQPSENLVAK 199
+ T S+ D + K SN +++ T + GR+ A K+ E+ A
Sbjct: 112 EKETSVSKEDTDHEEKASNEDMTKAIDITTPKAARRGRKRKA--EKQVETEEAGVVTTAA 169
Query: 200 ATPVLTTYSSRKRSGGSRLQ 219
A+ L R R + ++
Sbjct: 170 ASVNLKVSPKRGRPAATEVK 189
>UNIPROTKB|E1BP00 [details] [associations]
symbol:PSIP1 "PC4 and SFRS1-interacting protein"
species:9913 "Bos taurus" [GO:0034399 "nuclear periphery"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0009408 "response to heat" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0005720 "nuclear heterochromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000395 "mRNA
5'-splice site recognition" evidence=IEA] Pfam:PF00855
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GeneTree:ENSGT00530000063013 InterPro:IPR021567 Pfam:PF11467
IPI:IPI00700320 OMA:ESKDSHE EMBL:DAAA02022392 EMBL:DAAA02022393
EMBL:DAAA02022394 Ensembl:ENSBTAT00000010356 Uniprot:E1BP00
Length = 530
Score = 181 (68.8 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 67/249 (26%), Positives = 107/249 (42%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S A N+ + +
Sbjct: 65 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQAS--------AKQSNASSDVEVE 111
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPA-GRQLDALPAKEPLPEQPSENLVAK 199
+ T S+ D + K SN +++ T + GR+ A K+ E+ A
Sbjct: 112 EKETSVSKEDTDPEEKASNEDVTKAIDITTPKAARRGRKRKA--EKQVETEEAGVVTTAT 169
Query: 200 ATPVLTTYSSRKRSGGSRLQSTQ-----RMAPSTRRSRSSTMVESCRLQNLMMPYNNEGK 254
A+ L R R + ++ + +M S S ++ N + + +GK
Sbjct: 170 ASANLKVSPKRGRPAATEVKIPKPRGRPKMVKQPCPSESDIFLDR-NFTNRNVRLDKQGK 228
Query: 255 NAEGISAKS 263
N GI+ +S
Sbjct: 229 NFVGITVES 237
Score = 38 (18.4 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1283 NFDGGNFYNNHDRMKPGPYEH 1303
NF G ++ +++KP P H
Sbjct: 229 NFVGITVESSPEKLKPSPNPH 249
>UNIPROTKB|B8Y8S3 [details] [associations]
symbol:PSIP1 "LEDGF/p75" species:9940 "Ovis aries"
[GO:0000395 "mRNA 5'-splice site recognition" evidence=ISS]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005720 "nuclear heterochromatin" evidence=ISS] [GO:0006979
"response to oxidative stress" evidence=ISS] [GO:0009408 "response
to heat" evidence=ISS] [GO:0033613 "activating transcription factor
binding" evidence=ISS] [GO:0035327 "transcriptionally active
chromatin" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0097100 "supercoiled DNA binding" evidence=ISS] Pfam:PF00855
GO:GO:0006979 GO:GO:0005720 GO:GO:0003682 GO:GO:0009408
GO:GO:0001105 GO:GO:0035327 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0097100 GO:GO:0033613 InterPro:IPR021567
Pfam:PF11467 GO:GO:0000395 CTD:11168 HOVERGEN:HBG108300
InterPro:IPR017859 PRINTS:PR01503 EMBL:FJ497048
RefSeq:NP_001137364.1 UniGene:Oar.10734 GeneID:100233239
Uniprot:B8Y8S3
Length = 530
Score = 170 (64.9 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 57/200 (28%), Positives = 89/200 (44%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S A N+ + +
Sbjct: 65 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQAS--------AKQSNASSDVEVE 111
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPA-GRQLDALPAKEPLPEQPSENLVAK 199
+ T S+ D + K SN +++ T + GR+ A K+ E+ + A
Sbjct: 112 EKETSVSKEDTDHEEKASNEDVTKAIDITTPKAARRGRKRKA--EKQVETEEAAVVTTAT 169
Query: 200 ATPVLTTYSSRKRSGGSRLQ 219
A+ L R R + ++
Sbjct: 170 ASANLKVSPKRGRPAATEVK 189
>UNIPROTKB|Q9XSK7 [details] [associations]
symbol:HDGF "Hepatoma-derived growth factor" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008083 "growth factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] Pfam:PF00855 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0003677 GO:GO:0008201
GO:GO:0006351 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
EMBL:AJ237996 IPI:IPI00696746 RefSeq:NP_787026.1 UniGene:Bt.4705
ProteinModelPortal:Q9XSK7 SMR:Q9XSK7 STRING:Q9XSK7 PRIDE:Q9XSK7
GeneID:327953 KEGG:bta:327953 CTD:3068 eggNOG:NOG240243
HOGENOM:HOG000112874 HOVERGEN:HBG010574 InParanoid:Q9XSK7 KO:K16641
OrthoDB:EOG4PK28W NextBio:20810183 Uniprot:Q9XSK7
Length = 239
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 57/191 (29%), Positives = 89/191 (46%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
++K GDLV AK+KG+P WPA + E + + K VFFFGT + AF P D+ + E
Sbjct: 9 EYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEE 68
Query: 81 EKKQ-SLLTKRQG--RGADFVRAVQEIIDS-YEKLKKQDQVDSNSGD-ELTVANG---GN 132
K++ KR+G G + + S Y+ +K+ V+ + E T +G GN
Sbjct: 69 SKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQSSQKKSCVEEPEPEPEATEGDGDKKGN 128
Query: 133 SVNSISHLKDRTEASEATLDSQMKPS-NSTAGDGLN----LPTE-DSPAGRQLDA--LPA 184
+ S S + + E T + K + AGD L P E + G + + L
Sbjct: 129 AEGS-SDEEGKLVIDEPTKEKNEKGALKRRAGDLLEDSPKRPKEAEDLEGEEKEGATLEG 187
Query: 185 KEPLPEQPSEN 195
+ PLP + +N
Sbjct: 188 ERPLPVEAEKN 198
>UNIPROTKB|Q8MJG1 [details] [associations]
symbol:PSIP1 "PC4 and SFRS1-interacting protein"
species:9913 "Bos taurus" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005720 "nuclear heterochromatin" evidence=ISS] [GO:0033613
"activating transcription factor binding" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0097100
"supercoiled DNA binding" evidence=ISS] [GO:0000395 "mRNA 5'-splice
site recognition" evidence=ISS] [GO:0009408 "response to heat"
evidence=ISS] [GO:0006979 "response to oxidative stress"
evidence=ISS] Pfam:PF00855 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0035327
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 GO:GO:0097100
GO:GO:0033613 HOGENOM:HOG000230488 InterPro:IPR021567 Pfam:PF11467
eggNOG:NOG316844 GO:GO:0000395 EMBL:BC120106 EMBL:BC151754
EMBL:AF474175 IPI:IPI00700320 RefSeq:NP_001193405.1
UniGene:Bt.26201 ProteinModelPortal:Q8MJG1 SMR:Q8MJG1 STRING:Q8MJG1
PRIDE:Q8MJG1 GeneID:282011 KEGG:bta:282011 CTD:11168
HOVERGEN:HBG108300 InParanoid:Q8MJG1 OrthoDB:EOG4V438N
NextBio:20805878 InterPro:IPR017859 PRINTS:PR01503 Uniprot:Q8MJG1
Length = 530
Score = 169 (64.5 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 58/193 (30%), Positives = 84/193 (43%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S A N+ + +
Sbjct: 65 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQAS--------AKQSNASSDVEVE 111
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPA-GRQLDALPAKEPLPEQPSENLVAK 199
+ T S+ D + K SN +++ T + GR+ A E E +V
Sbjct: 112 EKETSVSKEDTDPEEKASNEDVTKAIDITTPKAARRGRKRKA----EKQVETEEAGVVTT 167
Query: 200 ATPVLTTYSSRKR 212
AT S KR
Sbjct: 168 ATASANLKVSPKR 180
>UNIPROTKB|F1NXS9 [details] [associations]
symbol:PSIP1 "Lens epithelium-derived growth factor"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR017956 SMART:SM00384 Pfam:PF00855
GO:GO:0003677 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GeneTree:ENSGT00530000063013 EMBL:AADN02057486 EMBL:AADN02057487
EMBL:AADN02057488 EMBL:AADN02057489 EMBL:AADN02057490
IPI:IPI00818325 Ensembl:ENSGALT00000038309 ArrayExpress:F1NXS9
Uniprot:F1NXS9
Length = 342
Score = 165 (63.1 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 60/211 (28%), Positives = 90/211 (42%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKMPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S+ ++ +S
Sbjct: 65 KDKYGKPNKRKG----FNEGLWEI-DNNPKVKFSHQ-PSHPAVNTSIKETIQE-SSPEAA 117
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAK- 199
+ E S A P S GD N P E +++ + E E+ S+ V K
Sbjct: 118 EGSEEKSGAKRRKPSIPKLSPKGDN-NSPAEAEAEEKEMHSTKEDEEPSEKNSKEGVVKT 176
Query: 200 --ATPVLTTYSSRKRSGGSRLQSTQRMAPST 228
A+ RKR + +S + +T
Sbjct: 177 NDASIPKVARRGRKRKAEKQAESEEAAVVAT 207
>UNIPROTKB|A1YAF7 [details] [associations]
symbol:PSIP1 "LEDGF/p75" species:9796 "Equus caballus"
[GO:0000395 "mRNA 5'-splice site recognition" evidence=ISS]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005720 "nuclear heterochromatin" evidence=ISS] [GO:0006979
"response to oxidative stress" evidence=ISS] [GO:0009408 "response
to heat" evidence=ISS] [GO:0033613 "activating transcription factor
binding" evidence=ISS] [GO:0035327 "transcriptionally active
chromatin" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0097100 "supercoiled DNA binding" evidence=ISS] Pfam:PF00855
GO:GO:0006979 GO:GO:0005720 GO:GO:0003682 GO:GO:0009408
GO:GO:0001105 GO:GO:0035327 GO:GO:0034399 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 GO:GO:0097100 GO:GO:0033613
GeneTree:ENSGT00530000063013 HOGENOM:HOG000230488
InterPro:IPR021567 Pfam:PF11467 GO:GO:0000395 CTD:11168
HOVERGEN:HBG108300 InterPro:IPR017859 PRINTS:PR01503 OMA:ESKDSHE
EMBL:DQ873682 RefSeq:NP_001075982.1 UniGene:Eca.3369 SMR:A1YAF7
STRING:A1YAF7 Ensembl:ENSECAT00000013750 GeneID:100034217
KEGG:ecb:100034217 InParanoid:A1YAF7 Uniprot:A1YAF7
Length = 530
Score = 167 (63.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 57/193 (29%), Positives = 84/193 (43%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S N+ + +
Sbjct: 65 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQASTKQS--------NASSDVEVE 111
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPA-GRQLDALPAKEPLPEQPSENLVAK 199
+ T S+ D + K SN +++ T + GR+ A E E +V
Sbjct: 112 EKETSVSKEDTDHEEKASNEDVTKAIDITTPKAARRGRKRKA----EKQVETEEAGVVTT 167
Query: 200 ATPVLTTYSSRKR 212
AT + S KR
Sbjct: 168 ATASVNLKVSPKR 180
>RGD|70961 [details] [associations]
symbol:Hdgf "hepatoma-derived growth factor" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=ISO] [GO:0001222
"transcription corepressor binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008083 "growth factor activity"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0009987 "cellular process" evidence=IEA;ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] Pfam:PF00855 RGD:70961 GO:GO:0005634
GO:GO:0005737 GO:GO:0005615 GO:GO:0000166 GO:GO:0003677
GO:GO:0045944 GO:GO:0008201 GO:GO:0006351 GO:GO:0000122
InterPro:IPR000313 PROSITE:PS50812 GO:GO:0034504 SMART:SM00293
CTD:3068 eggNOG:NOG240243 HOGENOM:HOG000112874 HOVERGEN:HBG010574
KO:K16641 OrthoDB:EOG4PK28W EMBL:AF448810 EMBL:AF389348
EMBL:BC070943 IPI:IPI00326566 RefSeq:NP_446159.1 UniGene:Rn.860
PDB:2B8A PDBsum:2B8A ProteinModelPortal:Q8VHK7 SMR:Q8VHK7
STRING:Q8VHK7 PhosphoSite:Q8VHK7 PRIDE:Q8VHK7 GeneID:114499
KEGG:rno:114499 UCSC:RGD:70961 InParanoid:Q8VHK7
EvolutionaryTrace:Q8VHK7 NextBio:618555 ArrayExpress:Q8VHK7
Genevestigator:Q8VHK7 Uniprot:Q8VHK7
Length = 237
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/192 (27%), Positives = 84/192 (43%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
++K GDLV AK+KG+P WPA + E + + K VFFFGT + AF P D+ + E
Sbjct: 9 EYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEE 68
Query: 81 EKKQ-SLLTKRQG--RGADFVRAVQEIIDS-YEKLKKQDQVDSNSGDELTVANGGNSVNS 136
K++ KR+G G + + S Y+ +K+ + + G+ +
Sbjct: 69 SKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQSSQKKSCAEEPEVEPEAHEGDGDKKGN 128
Query: 137 ISHLKDRTEASEATLDSQMKPSNST------AGDGL-NLPTEDSPAG------RQLDALP 183
D E + +D K N AGD L + P +G +++ AL
Sbjct: 129 AEGSSD--EEGKLVIDEPAKEKNEKGMLKRRAGDMLEDSPKRPKESGDHEEEEKEIAALE 186
Query: 184 AKEPLPEQPSEN 195
+ PLP + +N
Sbjct: 187 GERPLPVEMEKN 198
>UNIPROTKB|Q8VHK7 [details] [associations]
symbol:Hdgf "Hepatoma-derived growth factor" species:10116
"Rattus norvegicus" [GO:0005615 "extracellular space" evidence=IEA]
Pfam:PF00855 RGD:70961 GO:GO:0005634 GO:GO:0005737 GO:GO:0005615
GO:GO:0000166 GO:GO:0003677 GO:GO:0045944 GO:GO:0008201
GO:GO:0006351 GO:GO:0000122 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0034504 SMART:SM00293 CTD:3068 eggNOG:NOG240243
HOGENOM:HOG000112874 HOVERGEN:HBG010574 KO:K16641 OrthoDB:EOG4PK28W
EMBL:AF448810 EMBL:AF389348 EMBL:BC070943 IPI:IPI00326566
RefSeq:NP_446159.1 UniGene:Rn.860 PDB:2B8A PDBsum:2B8A
ProteinModelPortal:Q8VHK7 SMR:Q8VHK7 STRING:Q8VHK7
PhosphoSite:Q8VHK7 PRIDE:Q8VHK7 GeneID:114499 KEGG:rno:114499
UCSC:RGD:70961 InParanoid:Q8VHK7 EvolutionaryTrace:Q8VHK7
NextBio:618555 ArrayExpress:Q8VHK7 Genevestigator:Q8VHK7
Uniprot:Q8VHK7
Length = 237
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/192 (27%), Positives = 84/192 (43%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
++K GDLV AK+KG+P WPA + E + + K VFFFGT + AF P D+ + E
Sbjct: 9 EYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEE 68
Query: 81 EKKQ-SLLTKRQG--RGADFVRAVQEIIDS-YEKLKKQDQVDSNSGDELTVANGGNSVNS 136
K++ KR+G G + + S Y+ +K+ + + G+ +
Sbjct: 69 SKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQSSQKKSCAEEPEVEPEAHEGDGDKKGN 128
Query: 137 ISHLKDRTEASEATLDSQMKPSNST------AGDGL-NLPTEDSPAG------RQLDALP 183
D E + +D K N AGD L + P +G +++ AL
Sbjct: 129 AEGSSD--EEGKLVIDEPAKEKNEKGMLKRRAGDMLEDSPKRPKESGDHEEEEKEIAALE 186
Query: 184 AKEPLPEQPSEN 195
+ PLP + +N
Sbjct: 187 GERPLPVEMEKN 198
>UNIPROTKB|Q9NZW4 [details] [associations]
symbol:DSPP "Dentin sialophosphoprotein" species:9606 "Homo
sapiens" [GO:0031214 "biomineral tissue development" evidence=IEA]
[GO:0071460 "cellular response to cell-matrix adhesion"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=TAS] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005509 "calcium ion binding"
evidence=TAS] [GO:0005518 "collagen binding" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0001503 "ossification" evidence=TAS] GO:GO:0005578
GO:GO:0005509 GO:GO:0001501 GO:GO:0005518 eggNOG:NOG12793
GO:GO:0031214 GO:GO:0001503 GO:GO:0005201 EMBL:AF163151
EMBL:AC093895 EMBL:AF094508 IPI:IPI00872967 RefSeq:NP_055023.2
UniGene:Hs.678914 ProteinModelPortal:Q9NZW4 STRING:Q9NZW4
PhosphoSite:Q9NZW4 DMDM:215273974 PaxDb:Q9NZW4 PRIDE:Q9NZW4
Ensembl:ENST00000282478 Ensembl:ENST00000399271 GeneID:1834
KEGG:hsa:1834 UCSC:uc003hqu.3 CTD:1834 GeneCards:GC04P088529
HGNC:HGNC:3054 HPA:HPA036230 MIM:125420 MIM:125485 MIM:125490
MIM:125500 MIM:605594 neXtProt:NX_Q9NZW4 Orphanet:1653
Orphanet:166260 Orphanet:166265 PharmGKB:PA27507 HOVERGEN:HBG098252
OMA:ERESKVQ OrthoDB:EOG41RPVG GenomeRNAi:1834 NextBio:7491
PMAP-CutDB:A8MUI0 ArrayExpress:Q9NZW4 Bgee:Q9NZW4 CleanEx:HS_DSPP
Genevestigator:Q9NZW4 GermOnline:ENSG00000152591 GO:GO:0071460
Uniprot:Q9NZW4
Length = 1301
Score = 169 (64.5 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 118/639 (18%), Positives = 222/639 (34%)
Query: 106 DSYEKLKKQDQVDSNSGDELTVANGGNSVNSI--SHLKDRTEASEATL--DSQMKPSNST 161
DS + K D DSNS D ++ +S NS S D +++S+++ DS +S
Sbjct: 632 DSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSD 691
Query: 162 AGDGLNLP-TEDSPAGRQLDALPAKEPLPEQPSENLVAKATPVLTTYSSRKRSGGSRLQS 220
+ D N + DS D+ + + S++ + ++ + +S S S +
Sbjct: 692 SSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSN 751
Query: 221 TQRMAPSTRRSRSSTMVESCRLQNLMMPYNNEGKNAEGISAKSILDGSLIRNKRTRKSPD 280
+ + S+ S SS +S + N+ N S+ S + + + S D
Sbjct: 752 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSD 811
Query: 281 GSECNDLDSSALMSNGSIEDNS-SEIVTVESDAFSLNEGSTVDSGCKVEDSETVLECLDG 339
S+ +D DSS + + D+S S + SD+ ++GS DS + DS + D
Sbjct: 812 SSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNR-SDSSNSSDSSDS 870
Query: 340 DEMLSKRLDFQIXXXXXXXXXXXXXXXXCNDA-VDPPARINTATEVDVSTRNTCHSSENT 398
+ S D N + D N++ D S + S N+
Sbjct: 871 SDS-SNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNS 929
Query: 399 GGNLDERDFKEDGDEHLPLVKRARVRMGKPXXXXXXXXXXXXXXXPSKDTAVNLVEHISP 458
N + D D S D++ + S
Sbjct: 930 SDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSS 989
Query: 459 SLNNYDEGFTEKGPSLVKESTDSVSPSKVCSEVSGNRPQLWKGTTNQSFGCSADGEAALP 518
++ + S +S+DS S S S N + + S+D +
Sbjct: 990 DSSDSSDSSDSSNSSDSSDSSDSSDSSN--SSDSSNSSDSSNSSDSSDSSDSSDSSDSSD 1047
Query: 519 PSKRLHRALEAMSANAAEEGQASVQASSLINTSINGCCVNSICKCSHETVDSRERSGSG- 577
S + + S+++++ +S + S ++ + +S S ++ DS + S S
Sbjct: 1048 SSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSD 1107
Query: 578 LQNVPTCDQLSENCNSQKQESFRDDVGSVDNVDGKDLPGSPFSVHTIQTAVQTQTPVNIL 637
+ S++ NS D S D+ + D S S + ++ + + +
Sbjct: 1108 SSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSD 1167
Query: 638 PDPKKRHSSFQLYQNSLDQLSLKDEGSAEDLQ-LKDSRVENVDKEFNTSALVELSLDPVS 696
S +S D D + D DS + + + S+ S D
Sbjct: 1168 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1227
Query: 697 GADESVKLSPQNGSNELQYSVQGMSYENSESLKSQIDDN 735
+D + + S+ S S ++S+S S D N
Sbjct: 1228 SSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSN 1266
Score = 148 (57.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 123/708 (17%), Positives = 246/708 (34%)
Query: 113 KQDQVDSNSGDELTVANGGNSVNSISHLKDRTEASEATLDSQMKPSNSTAGDGLNLP--- 169
K D DS+S D ++ +S +S S + + S+++ S+S + D N
Sbjct: 546 KSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSS 605
Query: 170 --TEDSPAGRQLDALPAKEPLPEQPSENLVAKATPVLTTYSSRKRSGGSRLQSTQRMAPS 227
++ S + D+ +K + S++ + + + +S S S + + S
Sbjct: 606 DSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNS 665
Query: 228 TRRSRSSTMVESCRLQNLMMPYNNEGKNAEGISAKSILDGSLIRNKRTRKSPDGSECNDL 287
+ S SS +S + ++ + S++S D S + + S D S N
Sbjct: 666 SDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESS-DSSDSSDSDSSDSSDSSNSNSS 724
Query: 288 DSSALMSNGSIEDNSSEIVTVESDAFSLNEGSTVDSGCKVEDSETVLECLDGDEMLSKRL 347
DS + S+ S + ++S + SD+ + ++ S DS + D + S
Sbjct: 725 DSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDS-SNSS 783
Query: 348 DFQIXXXXXXXXXXXXXXXXCN--DAVDPP--ARINTATEVDVSTRNTCHSSENTGGNLD 403
D N D+ D + +++ D S + S N+ + D
Sbjct: 784 DSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSD 843
Query: 404 ERDFKEDGDEHLPLVKRARVRMGKPXXXXXXXXXXXXXXXPSKDTAVNLVEHISPSLNNY 463
D + D R+ S + S S N+
Sbjct: 844 SSDSSDGSDSDSS--NRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSS 901
Query: 464 DEGFTEKGPSLVKESTDSVSPSKVCSEVSGNRPQLWKGTTNQSFGCSADGEAA-LPPSKR 522
D ++ S + + S S S S N ++ S S ++ S
Sbjct: 902 DSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSD 961
Query: 523 LHRALEAMSANAAEEGQASVQASSLINTSINGCCVNSICKCSHETVDSRERSGSGLQNVP 582
+ ++ +N+++ +S + S ++ + +S S ++ DS + S S N
Sbjct: 962 SSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSS--NSS 1019
Query: 583 TCDQLSENCNSQKQESFRDDVGSVDNVDGKDLPGSPFSVHTIQTAVQTQTPVNILPDPKK 642
S++ NS D S D+ D D S S + ++ + + + D
Sbjct: 1020 DSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDS--SDSSD 1077
Query: 643 RHSSFQLYQNSLDQLSLKDEGSAEDLQLKDSRVENVDKEFNTSALVELSLDPVSGADESV 702
S + +S S S++ DS + + + S+ S D +D S
Sbjct: 1078 SSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSD 1137
Query: 703 KLSPQNGSNELQYSVQGMSYENSESLKSQIDDNCHINARCEAVEEIKQNEKQKEMSSVSI 762
+ + S+ + S S ++S+S S + ++ + + + S S
Sbjct: 1138 SSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSD 1197
Query: 763 SDDHLGDKGVASVLFSSSPAEGVDSP--ARVSPPNTSLCHVSTSESAN 808
S D + SS ++ DS + S N S +S+S++
Sbjct: 1198 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSD 1245
Score = 144 (55.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 118/692 (17%), Positives = 240/692 (34%)
Query: 115 DQVDSNSGDELTVANGGNSVNSISHLKDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSP 174
D DS+S D ++ +S +S S D +++S++ DS S+S+ D + DS
Sbjct: 589 DSSDSDSSDSSNSSDSSDSSDS-SDSSDSSDSSDSKSDSSKSESDSSDSDSKS----DSS 643
Query: 175 AGRQLDALPAKEPLPEQPSENLVAKATPVLTTYSSRKRSGGSRLQSTQRMAPSTRRSRSS 234
D+ + S N + ++ + S S S + + S+ S SS
Sbjct: 644 DSNSSDSSDNSDSSDSSNSSNS-SDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESS 702
Query: 235 TMVESCRLQNLMMPYNNEGKNAEGISAKSILDGSLIRNKRTRKSPDGSECNDLDSSALMS 294
+S + ++ +++ S+ S + + S D S +D S+ S
Sbjct: 703 DSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSS 762
Query: 295 NGSIEDNSSEIVTVESDAFSLNEGSTVDSGCKVEDSETVLECLDGDEMLSKRLDFQIXXX 354
N S +SS+ + SD+ + ++ + + DS + + +
Sbjct: 763 NSSDSSDSSDS-SDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSS 821
Query: 355 XXXXXXXXXXXXXCNDAVDPPARINTATEVDVSTRNTCHSSENTGGNLDERDFKEDGDEH 414
+++ D +++ D + N SS N+ + D D D
Sbjct: 822 NSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSS-NSSDSSDSSDSSNSSDSS 880
Query: 415 LPLVKRARVRMGKPXXXXXXXXXXXXXXXPSKDTAVNLVEHISPSLNNYDEGFTEKGPSL 474
S D++ + S +N + S
Sbjct: 881 DSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSN 940
Query: 475 VKESTDSVSPSKVCSEVSGNRPQLWKGTTNQSFGCSADGEAALPPSKRLHRALEAMSANA 534
+S+DS S + + +++ + S+D + S + + S+++
Sbjct: 941 SSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDS 1000
Query: 535 AEEGQASVQASSLINTSINGCCVNSICKCSHETVDSRERSGSGLQNVPTCDQLSENCNSQ 594
+ +S + S +++ + +S S ++ DS + S S + + D S++ NS
Sbjct: 1001 SNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSS-DSSDSSDS-SDSSNSS 1058
Query: 595 KQESFRDDVGSVDNVDGKDLPGSPFSVHTIQTAVQTQTPVNILPDPKKRHSSFQLYQNSL 654
D S D+ D D S S + ++ + + + S +S
Sbjct: 1059 DSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSS 1118
Query: 655 DQLSLKDEGSAEDLQLKDSRVENVDKEFNTSALVELSLDPVSGADESVKLSPQNGSNELQ 714
D + D + D DS + + + S+ S D +D S + S+
Sbjct: 1119 DSSNSSDSSDSSDSS--DSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSD 1176
Query: 715 YSVQGMSYENSESLKSQIDDNCHINARCEAVEEIKQNEKQKEMSSVSISDDHLGDKGVAS 774
S S ++S+S S + ++ + + + S S S D D +S
Sbjct: 1177 SSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS-SDSNESS 1235
Query: 775 VLFSSSPAEGVDSPARVSPPNTSLCHVSTSES 806
SS ++ DS ++S STS+S
Sbjct: 1236 D--SSDSSDSSDSSNSSDSSDSSDSSDSTSDS 1265
Score = 141 (54.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 127/710 (17%), Positives = 248/710 (34%)
Query: 88 TKRQGRGADFVRAVQEIIDSYEKLKKQDQV-DSNSGDE---LTVANGGNSVNSISHLKDR 143
+K G G+D A + DS D + N+G++ + + G S +S S D
Sbjct: 498 SKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDS 557
Query: 144 TEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAKATPV 203
+ +S+++ S S+S + + DS D+ + S + +
Sbjct: 558 SNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSD-- 615
Query: 204 LTTYSSRKRSGGSRLQSTQRMAPSTRRSRSSTMVESCRLQNLMMPYNNEGKNAEGISAKS 263
++ SS +S S+ +S + S S S +S + N+ + S+ S
Sbjct: 616 -SSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDS 674
Query: 264 ILDGSLIRNKRTRKSPDGSECNDLDSSALMSNGSIEDNSSEIVTVESDAFSLNEGSTVDS 323
S + + S D S+ ++ S+ S+ S D+S + S++ + ++ DS
Sbjct: 675 SDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDS 734
Query: 324 GCKVEDSETVLECLDGDEMLSKRLDFQIXXXXXXXXXXXXXXXXCNDAVDPPARINTATE 383
DS + D + S D +D+ D N++
Sbjct: 735 S----DSSNSSDSSDSSDS-SNSSD----SSDSSDSSNSSDSSDSSDSSDSSDSSNSSDS 785
Query: 384 VDVSTRNTCHSSENTGGNLDERDFKEDGDEHLPLVKRARVRMGKPXXXXXXXXXXXXXXX 443
D S + S N+ + + D + D +
Sbjct: 786 NDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSS 845
Query: 444 PSKDTAVNLVEHISPSLNNYD--EGFTEKGPSLVKESTDS--VSPSKVCSEVSGNRPQLW 499
S D + + + S S N+ D + S +S+DS S S S+ S +
Sbjct: 846 DSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDS 905
Query: 500 KGTTNQSFGC-SADGEAALPPSKRLHRALEAMSANAAEEGQASVQASSLINTSINGCCVN 558
++N S S++ + S + + S+N+++ +S +S+ ++S + N
Sbjct: 906 SDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSS-DSSNSSDSSNSSDSSN 964
Query: 559 SICKCSHETVDSRERSGSGLQNVPTCDQLSENCNSQKQESFRDDVGSVDNVDGKDLPGSP 618
S + DS + S S + + D S++ +S + D S D+ D + S
Sbjct: 965 SSDSSDSNSSDSSDSSNSS-DSSDSSDS-SDSSDSSDSSNSSDSSDSSDSSDSSNSSDSS 1022
Query: 619 FSVHTIQTAVQTQTPVNILPDPKKRHSSFQLYQNSLDQLSLKDEGSAEDLQ-LKDSRVEN 677
S + ++ + + + S NS D D + D DS +
Sbjct: 1023 NSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSS 1082
Query: 678 VDKEFNTSALVELSLDPVSGADESVKLSPQNGSNELQYSVQGMSYENSESLKSQIDDNCH 737
+ + S+ S D +D S + S+ S S ++S+S S N
Sbjct: 1083 ESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSS 1142
Query: 738 INARCEAVEEIKQNEKQKEMSSVSISDDHLGDKGVASVLFSSSPAEGVDS 787
++ + + + S S S D ++ SS ++ DS
Sbjct: 1143 DSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDS 1192
Score = 130 (50.8 bits), Expect = 0.00045, P = 0.00045
Identities = 127/711 (17%), Positives = 248/711 (34%)
Query: 106 DSYEKLKKQDQVDS-NSGDELTVANGGNSVNSISHLKDRTEASEATLDSQMKPSNSTAGD 164
DSY+ K Q D NS DE +NG + NS S + + +A+ +S N D
Sbjct: 451 DSYDFDDKSMQGDDPNSSDE---SNGNDDANSESD-NNSSSRGDASYNSDESKDNGNGSD 506
Query: 165 GLNLPTEDSPAGRQLDALPAK-------EPLPEQPSENLVAKATPVLTTYSSRKRSGGSR 217
+DS + + + + + S + ++ ++ SS
Sbjct: 507 SKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDS 566
Query: 218 LQSTQRMAPSTRRSRSSTMVESCRLQNLMMPYNNEGKNAEGISAKSILDGSLIRNKRTRK 277
S + S+ S SS S + +N +++ + D S + ++
Sbjct: 567 SDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDS 626
Query: 278 SPDGSECNDLDSSALMSNGSIEDNSSEIVTVESDAFSLNEGSTVDSGCKVEDSETVLECL 337
S S+ +D DS + S+ + D+S + SD S N ++ DS + S++
Sbjct: 627 SKSESDSSDSDSKSDSSDSNSSDSSDN--SDSSD--SSNSSNSSDSSDSSDSSDSSSSS- 681
Query: 338 DGDEMLSKRLDFQIXXXXXXXXXXXXXXXXCNDAVDPPARINTATEVDVSTRNTCHSSEN 397
D +D+ D + + +++ D S + S N
Sbjct: 682 DSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSD--SSNSNSSDSDSSNSSDSSDSSN 739
Query: 398 TGGNLDERDFKEDGDEHLPLVKRARVRMGKPXXXXXXXXXXXXXXXPSKDTAVNLVEHIS 457
+ + D D D + S D++ N + S
Sbjct: 740 SSDSSDSSDSSNSSDSSDS--SDSSNSSDSSDSSDSSDSSDSSNSSDSNDSS-NSSDS-S 795
Query: 458 PSLNNYDEGFTEKGPSLVKESTDSVSPSKVCSEVSGNRPQLWKGTTNQSFGCSADGEAAL 517
S N+ D S +S+DS S + S S + + + S+DG +
Sbjct: 796 DSSNSSDSS-NSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDS- 853
Query: 518 PPSKRLHRALEAMSANAAEEGQASVQASSLINTSINGCCVNSICKCSHETVDSRERSGSG 577
S R + + S+++++ +S + S + + +S S ++ S + S
Sbjct: 854 DSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSD 913
Query: 578 LQNVPTCDQLSENCNSQKQESFRDDVGSVDNVDGKDLPGSPFSVHTIQTAVQTQTPVNIL 637
+ SE+ NS + D S D+ D D S S ++ ++ + + +
Sbjct: 914 SSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNS 973
Query: 638 PDPKKRHSSFQLYQNSLDQLSLKDEGSAEDLQLKDSRVENVDKEFNTSALVELSLDPVSG 697
D +S +S D D S++ DS + + + S+ S D +
Sbjct: 974 SDSSDSSNSSDSSDSS-DSSDSSD--SSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNS 1030
Query: 698 ADESVKLSPQNGSNELQYSVQGMSYENSESLKSQIDDNCHINARCEAVEEIKQNEKQKEM 757
+D S + S+ S S +S+S S + ++ + ++ +
Sbjct: 1031 SDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDS 1090
Query: 758 SSVSISDDHLGDKGVASVLFSSSPAEGVDSPARVSPPNTSLCHVSTSESAN 808
S+ S S D + SS ++ DS + S + S +S+S+N
Sbjct: 1091 SNSSDSSDSSDSSDSSDSSDSSDSSDSSDS-SNSSDSSDSSDSSDSSDSSN 1140
>UNIPROTKB|O75475 [details] [associations]
symbol:PSIP1 "PC4 and SFRS1-interacting protein"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005720
"nuclear heterochromatin" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0000395 "mRNA 5'-splice site recognition" evidence=IDA]
[GO:0034399 "nuclear periphery" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0006979 "response to oxidative stress"
evidence=ISS] [GO:0009408 "response to heat" evidence=ISS]
[GO:0097100 "supercoiled DNA binding" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005829
"cytosol" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] Pfam:PF00855 GO:GO:0005829 Reactome:REACT_116125
GO:GO:0019048 GO:GO:0005654 GO:GO:0016032 GO:GO:0006979
GO:GO:0006355 GO:GO:0005720 GO:GO:0006351 GO:GO:0003682
GO:GO:0009408 EMBL:CH471071 GO:GO:0001105 GO:GO:0035327
GO:GO:0034399 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GO:GO:0097100 GO:GO:0033613 InterPro:IPR021567 Pfam:PF11467
eggNOG:NOG316844 GO:GO:0000395 PDB:3U88 PDBsum:3U88 PDB:2B4J
PDBsum:2B4J CTD:11168 HOVERGEN:HBG108300 OrthoDB:EOG4V438N
InterPro:IPR017859 PRINTS:PR01503 EMBL:AF098483 EMBL:AF098482
EMBL:AF063020 EMBL:AF199339 EMBL:AF432220 EMBL:AL359998
EMBL:AL441925 EMBL:AL513423 EMBL:BC044568 EMBL:BC064135 EMBL:U94319
IPI:IPI00028122 IPI:IPI00333317 PIR:JC7168 RefSeq:NP_001121689.1
RefSeq:NP_066967.3 RefSeq:NP_150091.2 UniGene:Hs.741408 PDB:1Z9E
PDB:3F9K PDB:3HPG PDB:3HPH PDB:4FU6 PDBsum:1Z9E PDBsum:3F9K
PDBsum:3HPG PDBsum:3HPH PDBsum:4FU6 ProteinModelPortal:O75475
SMR:O75475 DIP:DIP-46656N IntAct:O75475 STRING:O75475
Allergome:2120 PaxDb:O75475 PeptideAtlas:O75475 PRIDE:O75475
DNASU:11168 Ensembl:ENST00000380715 Ensembl:ENST00000380716
Ensembl:ENST00000380733 Ensembl:ENST00000380738
Ensembl:ENST00000397519 GeneID:11168 KEGG:hsa:11168 UCSC:uc003zlv.4
UCSC:uc003zly.3 GeneCards:GC09M015456 HGNC:HGNC:9527 HPA:CAB013718
HPA:HPA019697 MIM:603620 neXtProt:NX_O75475 PharmGKB:PA33872
InParanoid:O75475 OMA:ESKDSHE PhylomeDB:O75475 ChiTaRS:PSIP1
EvolutionaryTrace:O75475 GenomeRNAi:11168 NextBio:42491
PMAP-CutDB:O75475 ArrayExpress:O75475 Bgee:O75475 CleanEx:HS_PSIP1
Genevestigator:O75475 GermOnline:ENSG00000164985 Uniprot:O75475
Length = 530
Score = 164 (62.8 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 56/193 (29%), Positives = 83/193 (43%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q N+ + +
Sbjct: 65 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQ--------AATKQSNASSDVEVE 111
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPA-GRQLDALPAKEPLPEQPSENLVAK 199
+ T S+ D + K SN +++ T + GR+ A E E +V
Sbjct: 112 EKETSVSKEDTDHEEKASNEDVTKAVDITTPKAARRGRKRKA----EKQVETEEAGVVTT 167
Query: 200 ATPVLTTYSSRKR 212
AT + S KR
Sbjct: 168 ATASVNLKVSPKR 180
Score = 49 (22.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 464 DEGFTEKGPS--LVKESTDSVSPSKVCSEVSGNRPQLWKGTTNQSFGCSADGEAALPPS 520
D+G +KGP+ L KE T S + + GN+PQ G +N+ + + PS
Sbjct: 458 DQG--KKGPNKKLEKEQTGSKTLNGGSDAQDGNQPQ-HNGESNEDSKDNHEASTKKKPS 513
>MGI|MGI:1194494 [details] [associations]
symbol:Hdgf "hepatoma-derived growth factor" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=ISO] [GO:0001222
"transcription corepressor binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005615 "extracellular space"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008083 "growth
factor activity" evidence=ISO] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0009987 "cellular process" evidence=IDA]
[GO:0017053 "transcriptional repressor complex" evidence=ISO]
[GO:0034504 "protein localization to nucleus" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] MGI:MGI:1194494 Pfam:PF00855
GO:GO:0005634 GO:GO:0005737 GO:GO:0005615 GO:GO:0006355
GO:GO:0000166 GO:GO:0003677 GO:GO:0008201 GO:GO:0006351
GO:GO:0008083 GO:GO:0009987 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 CTD:3068 eggNOG:NOG240243 HOGENOM:HOG000112874
HOVERGEN:HBG010574 KO:K16641 OrthoDB:EOG4PK28W ChiTaRS:HDGF
EMBL:D63707 EMBL:AF251787 EMBL:AK017863 EMBL:AK029475 EMBL:AK076021
EMBL:BC005713 EMBL:BC021654 IPI:IPI00313817 PIR:JC5660
RefSeq:NP_032257.3 UniGene:Mm.292208 ProteinModelPortal:P51859
SMR:P51859 IntAct:P51859 STRING:P51859 PhosphoSite:P51859
PaxDb:P51859 PRIDE:P51859 Ensembl:ENSMUST00000005017 GeneID:15191
KEGG:mmu:15191 UCSC:uc008ptc.2 GeneTree:ENSGT00530000063013
InParanoid:P51859 OMA:KGSARGC NextBio:287715 PMAP-CutDB:P51859
Bgee:P51859 CleanEx:MM_HDGF Genevestigator:P51859
GermOnline:ENSMUSG00000004897 Uniprot:P51859
Length = 237
Score = 154 (59.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 53/192 (27%), Positives = 83/192 (43%)
Query: 21 QWKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTE 80
++K GDLV AK+KG+P WPA + E + + K VFFFGT + AF P D+ + E
Sbjct: 9 EYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEE 68
Query: 81 EKKQ-SLLTKRQG--RGADFVRAVQEIIDS-YEKLKKQDQVDSNSGDELTVANGGNSVNS 136
K++ KR+G G + + S Y+ +K+ + G+ S
Sbjct: 69 SKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQSSQKKSCAAEPEVEPEAHEGDGDKKGS 128
Query: 137 ISHLKDRTEASEATLDSQMKPSNST------AGDGL-NLPTEDSPAG------RQLDALP 183
D E + +D K N AGD L + P +G +++ AL
Sbjct: 129 AEGSSD--EEGKLVIDEPAKEKNEKGTLKRRAGDVLEDSPKRPKESGDHEEEDKEIAALE 186
Query: 184 AKEPLPEQPSEN 195
+ PLP + +N
Sbjct: 187 GERPLPVEVEKN 198
>UNIPROTKB|D2H2Y2 [details] [associations]
symbol:PANDA_004016 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0000395 "mRNA 5'-splice
site recognition" evidence=ISS] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005720 "nuclear
heterochromatin" evidence=ISS] [GO:0006979 "response to oxidative
stress" evidence=ISS] [GO:0009408 "response to heat" evidence=ISS]
[GO:0033613 "activating transcription factor binding" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0097100 "supercoiled DNA
binding" evidence=ISS] Pfam:PF00855 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0035327
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 GO:GO:0097100
GO:GO:0033613 InterPro:IPR021567 Pfam:PF11467 GO:GO:0000395
InterPro:IPR017859 PRINTS:PR01503 EMBL:GL192451 Uniprot:D2H2Y2
Length = 511
Score = 163 (62.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 68/265 (25%), Positives = 107/265 (40%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S N+ + +
Sbjct: 65 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQASTKQS--------NASSDVEVE 111
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPA-GRQLDALPAKEPLPEQPSENLVAK 199
+ T S+ D + K SN +++ T + GR+ A K+ E+
Sbjct: 112 EKETSVSKEDTDHEEKASNEDVTKAIDITTPKAARRGRKRKA--EKQVETEEAGVVTTPT 169
Query: 200 ATPVLTTYSSRKRSGGSRLQSTQ-RMAPSTRRSRSSTMVESCRLQNLMMPYNNEGKNAEG 258
A+ L R R + ++ + R P + + + ++ E K +
Sbjct: 170 ASVNLKVSPKRGRPAATEVKIPKPRGRPKMVKQPCPSESDMVTEEDKSKKKGQEEKQPKK 229
Query: 259 ISAKSILDGSLIRNKRTRKSPDGSE 283
K DG +K RK PD E
Sbjct: 230 -QLKKDEDGQKEEDK-PRKEPDKKE 252
>UNIPROTKB|E2REJ7 [details] [associations]
symbol:PSIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0005720 "nuclear heterochromatin" evidence=ISS]
[GO:0033613 "activating transcription factor binding" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0097100 "supercoiled DNA
binding" evidence=ISS] [GO:0000395 "mRNA 5'-splice site
recognition" evidence=ISS] [GO:0009408 "response to heat"
evidence=ISS] [GO:0006979 "response to oxidative stress"
evidence=ISS] Pfam:PF00855 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0035327
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 GO:GO:0097100
GO:GO:0033613 GeneTree:ENSGT00530000063013 InterPro:IPR021567
Pfam:PF11467 GO:GO:0000395 OMA:ESKDSHE EMBL:AAEX03007864
EMBL:AAEX03007865 Ensembl:ENSCAFT00000002423 Uniprot:E2REJ7
Length = 572
Score = 167 (63.8 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 57/193 (29%), Positives = 84/193 (43%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 48 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 107
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S N+ + +
Sbjct: 108 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQASTKQS--------NASSDVEVE 154
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPA-GRQLDALPAKEPLPEQPSENLVAK 199
+ T S+ D + K SN +++ T + GR+ A E E +V
Sbjct: 155 EKETSVSKEDTDHEEKASNEDVTKAIDITTPKAARRGRKRKA----EKQVETEEAGVVTT 210
Query: 200 ATPVLTTYSSRKR 212
AT + S KR
Sbjct: 211 ATASVNLKVSPKR 223
Score = 52 (23.4 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 1058 PEHNSEIPEE-RDANPSMKKHRHILEEVDGELEMED 1092
P+HN + EE +D + + K + EE + E+ ++D
Sbjct: 533 PQHNGDSSEESKDNHEASSKKKPSSEERETEISLKD 568
Score = 37 (18.1 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 208 SSRKRSGGSRLQSTQR 223
S +KR GG Q+ R
Sbjct: 327 SEKKRKGGRNFQTPHR 342
>MGI|MGI:2142116 [details] [associations]
symbol:Psip1 "PC4 and SFRS1 interacting protein 1"
species:10090 "Mus musculus" [GO:0000395 "mRNA 5'-splice site
recognition" evidence=ISO] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005720 "nuclear heterochromatin"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IDA]
[GO:0009408 "response to heat" evidence=IDA] [GO:0033613
"activating transcription factor binding" evidence=ISO] [GO:0034399
"nuclear periphery" evidence=ISO] [GO:0035327 "transcriptionally
active chromatin" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0097100 "supercoiled DNA binding" evidence=ISO] MGI:MGI:2142116
Pfam:PF00855 GO:GO:0005654 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0035327
GO:GO:0034399 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
EMBL:BX682545 GO:GO:0097100 GO:GO:0033613
GeneTree:ENSGT00530000063013 InterPro:IPR021567 Pfam:PF11467
eggNOG:NOG316844 GO:GO:0000395 CTD:11168 HOVERGEN:HBG108300
OrthoDB:EOG4V438N InterPro:IPR017859 PRINTS:PR01503 OMA:ESKDSHE
ChiTaRS:PSIP1 EMBL:AJ308965 EMBL:AJ308966 EMBL:AF339082
EMBL:AF339083 EMBL:BC002260 EMBL:BC043079 EMBL:BC052177
EMBL:AK011572 EMBL:AK139598 EMBL:AK161426 EMBL:AK169600
IPI:IPI00115257 IPI:IPI00608118 RefSeq:NP_598709.1
UniGene:Mm.105331 UniGene:Mm.448301 ProteinModelPortal:Q99JF8
SMR:Q99JF8 STRING:Q99JF8 PhosphoSite:Q99JF8 PaxDb:Q99JF8
PRIDE:Q99JF8 Ensembl:ENSMUST00000030207 Ensembl:ENSMUST00000107215
GeneID:101739 KEGG:mmu:101739 UCSC:uc008tkw.1 UCSC:uc008tkx.1
InParanoid:A2BI10 NextBio:355092 Bgee:Q99JF8 CleanEx:MM_PSIP1
Genevestigator:Q99JF8 GermOnline:ENSMUSG00000028484 Uniprot:Q99JF8
Length = 528
Score = 162 (62.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 49/162 (30%), Positives = 74/162 (45%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S N+ + +
Sbjct: 65 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQASTKQS--------NASSDVEVE 111
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPA-GRQLDA 181
+ T S+ D + K SN +++ T + GR+ A
Sbjct: 112 EKETNVSKEDTDQEEKASNEDVTKAVDITTPKAARRGRKRKA 153
Score = 44 (20.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 564 SHETVDSRERS-GSGLQNVPTCDQLSENCNSQKQESFRDDVGSVDNVDGKD 613
+++T D ++ L+ PT + S N S QES N DGKD
Sbjct: 451 ANKTKDQGKKGPNKKLEKEPTGTK-SLNGGSDAQESNHPQHNGDSNEDGKD 500
>RGD|631439 [details] [associations]
symbol:Psip1 "PC4 and SFRS1 interacting protein 1" species:10116
"Rattus norvegicus" [GO:0000395 "mRNA 5'-splice site recognition"
evidence=ISO;ISS] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO;ISS] [GO:0003682 "chromatin
binding" evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005654 "nucleoplasm" evidence=ISO;ISS] [GO:0005720 "nuclear
heterochromatin" evidence=ISO;ISS;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=ISO;ISS] [GO:0009408 "response to heat"
evidence=ISO;ISS] [GO:0033613 "activating transcription factor
binding" evidence=ISO;ISS] [GO:0034399 "nuclear periphery"
evidence=ISO;ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0097100
"supercoiled DNA binding" evidence=IDA] Pfam:PF00855 RGD:631439
GO:GO:0005654 GO:GO:0006979 GO:GO:0005720 GO:GO:0003682
GO:GO:0009408 GO:GO:0001105 GO:GO:0035327 GO:GO:0034399
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 GO:GO:0097100
GO:GO:0033613 HOGENOM:HOG000230488 InterPro:IPR021567 Pfam:PF11467
eggNOG:NOG316844 GO:GO:0000395 CTD:11168 HOVERGEN:HBG108300
OrthoDB:EOG4V438N InterPro:IPR017859 PRINTS:PR01503 EMBL:AF339084
EMBL:AF372090 IPI:IPI00213638 IPI:IPI00608154 RefSeq:NP_786941.1
UniGene:Rn.93075 ProteinModelPortal:Q812D1 SMR:Q812D1 STRING:Q812D1
PhosphoSite:Q812D1 PRIDE:Q812D1 GeneID:313323 KEGG:rno:313323
UCSC:RGD:631439 InParanoid:Q812D1 NextBio:665985
ArrayExpress:Q812D1 Genevestigator:Q812D1
GermOnline:ENSRNOG00000011498 Uniprot:Q812D1
Length = 528
Score = 161 (61.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 44/142 (30%), Positives = 69/142 (48%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLK-KQDQVDSNSGDELTVANGGNSVNSISH 139
K K KR+G F + EI D+ K+K QV + + + S+S
Sbjct: 65 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQVSTKQSNASSDVEAEEKETSVSK 119
Query: 140 LKDRTEASEATLDSQMKPSNST 161
+D + +A+ + K ++ T
Sbjct: 120 -EDTDQEEKASNEDVTKAADIT 140
Score = 42 (19.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 38/187 (20%), Positives = 70/187 (37%)
Query: 564 SHETVDSRERSGSGLQNVPTCDQLSENCNSQKQESFRDDVGSVDNVDGK-DLPGSPFSVH 622
S +D + G + P QL + QK+E D +GK ++ ++
Sbjct: 207 SDMVIDEDKSKKKGPEEKPPKKQLKKEEEGQKEEE--KPRKEPDKKEGKKEVESKRKNLA 264
Query: 623 TIQTAVQTQTPVNILPDPKKRHSSFQLYQNSLDQLSLKDEGSAEDLQLKDSRVENVDKEF 682
+ + + + +K+ + +Q + + LK + E K + E ++ E
Sbjct: 265 KPGVTSTSDSEEDDDQEGEKKRKGGRHFQAAHRRNMLKGQHEKEAADRKRKQEEQMETEQ 324
Query: 683 NTSALVELSLDPVSGADESVKLSPQNGSNELQYSVQGMSYENSESLKSQIDDNCHINARC 742
T D G VK + + +Q + E SLK DN +N RC
Sbjct: 325 QTK-------D--EGKKPEVKKVEKKRETSMDSRLQRIHAEIKNSLKI---DNLDVN-RC 371
Query: 743 -EAVEEI 748
EA++E+
Sbjct: 372 IEALDEL 378
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 176 GRQLDALPAKEPLPEQPSENLVAK----ATPVLTTYSS----------RKRSGGSRLQST 221
G++ + P KEP ++ + + +K A P +T+ S +KR GG Q+
Sbjct: 236 GQKEEEKPRKEPDKKEGKKEVESKRKNLAKPGVTSTSDSEEDDDQEGEKKRKGGRHFQAA 295
Query: 222 QR 223
R
Sbjct: 296 HR 297
>UNIPROTKB|F1SW39 [details] [associations]
symbol:SBP75 "PC4 and SFRS1-interacting protein"
species:10116 "Rattus norvegicus" [GO:0000395 "mRNA 5'-splice site
recognition" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0009408 "response to heat" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0034399 "nuclear periphery" evidence=IEA] Pfam:PF00855
RGD:631439 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GeneTree:ENSGT00530000063013 InterPro:IPR021567 Pfam:PF11467
InterPro:IPR017859 PRINTS:PR01503 OMA:ESKDSHE IPI:IPI00213638
UniGene:Rn.93075 EMBL:CH473978 EMBL:AB285525
Ensembl:ENSRNOT00000016130 Uniprot:F1SW39
Length = 528
Score = 161 (61.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 44/142 (30%), Positives = 69/142 (48%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLK-KQDQVDSNSGDELTVANGGNSVNSISH 139
K K KR+G F + EI D+ K+K QV + + + S+S
Sbjct: 65 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQVSTKQSNASSDVEAEEKETSVSK 119
Query: 140 LKDRTEASEATLDSQMKPSNST 161
+D + +A+ + K ++ T
Sbjct: 120 -EDTDQEEKASNEDVTKAADIT 140
Score = 42 (19.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 38/187 (20%), Positives = 70/187 (37%)
Query: 564 SHETVDSRERSGSGLQNVPTCDQLSENCNSQKQESFRDDVGSVDNVDGK-DLPGSPFSVH 622
S +D + G + P QL + QK+E D +GK ++ ++
Sbjct: 207 SDMVIDEDKSKKKGPEEKPPKKQLKKEEEGQKEEE--KPRKEPDKKEGKKEVESKRKNLA 264
Query: 623 TIQTAVQTQTPVNILPDPKKRHSSFQLYQNSLDQLSLKDEGSAEDLQLKDSRVENVDKEF 682
+ + + + +K+ + +Q + + LK + E K + E ++ E
Sbjct: 265 KPGVTSTSDSEEDDDQEGEKKRKGGRNFQAAHRRNMLKGQHEKEAADRKRKQEEQMETEQ 324
Query: 683 NTSALVELSLDPVSGADESVKLSPQNGSNELQYSVQGMSYENSESLKSQIDDNCHINARC 742
T D G VK + + +Q + E SLK DN +N RC
Sbjct: 325 QTK-------D--EGKKPEVKKVEKKRETSMDSRLQRIHAEIKNSLKI---DNLDVN-RC 371
Query: 743 -EAVEEI 748
EA++E+
Sbjct: 372 IEALDEL 378
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 176 GRQLDALPAKEPLPEQPSENLVAK----ATPVLTTYSS----------RKRSGGSRLQST 221
G++ + P KEP ++ + + +K A P +T+ S +KR GG Q+
Sbjct: 236 GQKEEEKPRKEPDKKEGKKEVESKRKNLAKPGVTSTSDSEEDDDQEGEKKRKGGRNFQAA 295
Query: 222 QR 223
R
Sbjct: 296 HR 297
>UNIPROTKB|Q66T72 [details] [associations]
symbol:PSIP1 "PC4 and SFRS1-interacting protein"
species:9685 "Felis catus" [GO:0000395 "mRNA 5'-splice site
recognition" evidence=ISS] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005720 "nuclear
heterochromatin" evidence=ISS] [GO:0006979 "response to oxidative
stress" evidence=ISS] [GO:0009408 "response to heat" evidence=ISS]
[GO:0033613 "activating transcription factor binding" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0097100 "supercoiled DNA
binding" evidence=ISS] Pfam:PF00855 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0035327
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 GO:GO:0097100
GO:GO:0033613 GeneTree:ENSGT00530000063013 InterPro:IPR021567
Pfam:PF11467 eggNOG:NOG316844 GO:GO:0000395 CTD:11168
HOVERGEN:HBG108300 InterPro:IPR017859 PRINTS:PR01503 EMBL:AY705213
RefSeq:NP_001009372.1 ProteinModelPortal:Q66T72 SMR:Q66T72
STRING:Q66T72 PRIDE:Q66T72 GeneID:493969 KEGG:fca:493969
Uniprot:Q66T72
Length = 530
Score = 164 (62.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 56/200 (28%), Positives = 87/200 (43%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S N+ + +
Sbjct: 65 KEKYGKPNKRKG----FNEGLWEI-DNNPKVKFSSQQASTKQS--------NASSDVEVE 111
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPA-GRQLDALPAKEPLPEQPSENLVAK 199
+ T S+ D + K SN +++ T + GR+ A K+ E+ A
Sbjct: 112 EKETSVSKEDTDHEEKASNEDVTKAIDITTPKAARRGRKRKA--EKQVETEEAGVVTTAA 169
Query: 200 ATPVLTTYSSRKRSGGSRLQ 219
A+ L R R + ++
Sbjct: 170 ASVNLKVSPKRGRPAATEVK 189
Score = 38 (18.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 208 SSRKRSGGSRLQSTQR 223
S +KR GG Q+ R
Sbjct: 284 SEKKRKGGRNFQTAHR 299
>UNIPROTKB|F1NKN6 [details] [associations]
symbol:PSIP1 "Lens epithelium-derived growth factor"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000395 "mRNA 5'-splice site recognition"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005720 "nuclear heterochromatin" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0009408 "response to heat" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0034399
"nuclear periphery" evidence=IEA] InterPro:IPR017956 SMART:SM00384
Pfam:PF00855 GO:GO:0006979 GO:GO:0003677 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0034399
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GeneTree:ENSGT00530000063013 InterPro:IPR021567 Pfam:PF11467
GO:GO:0000395 IPI:IPI00578410 OMA:ESKDSHE EMBL:AADN02057486
EMBL:AADN02057487 EMBL:AADN02057488 EMBL:AADN02057489
EMBL:AADN02057490 Ensembl:ENSGALT00000024372 ArrayExpress:F1NKN6
Uniprot:F1NKN6
Length = 579
Score = 165 (63.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 60/211 (28%), Positives = 90/211 (42%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKMPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S+ ++ +S
Sbjct: 65 KDKYGKPNKRKG----FNEGLWEI-DNNPKVKFSHQ-PSHPAVNTSIKETIQE-SSPEAA 117
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAK- 199
+ E S A P S GD N P E +++ + E E+ S+ V K
Sbjct: 118 EGSEEKSGAKRRKPSIPKLSPKGDN-NSPAEAEAEEKEMHSTKEDEEPSEKNSKEGVVKT 176
Query: 200 --ATPVLTTYSSRKRSGGSRLQSTQRMAPST 228
A+ RKR + +S + +T
Sbjct: 177 NDASIPKVARRGRKRKAEKQAESEEAAVVAT 207
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 1059 EHNSEIPEERDANPSMKKHRHILEEVDGELE 1089
+HN E EE+D K + EE ELE
Sbjct: 540 QHNGENAEEKDKLEVASKKKTCGEE--SELE 568
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 31/137 (22%), Positives = 54/137 (39%)
Query: 633 PVNILPDPKKRHSSFQ-LYQNSLDQLSLKDEGSAE-DLQLKDSRVENVDKEFNTSALVEL 690
PVN KK+ + Q D+ K+E + + KD + E K N + L
Sbjct: 258 PVNEEEKAKKKGPDEKPKKQGKKDEEGQKEEEKPKKEYDKKDGKKEAEPKRKNAAKLGSA 317
Query: 691 SLDPVS--GADESVKLSPQNG----SNELQYSVQGM-SYENSESLKSQIDDN-CHINARC 742
S G +E + G S + ++G E +E + Q + + +
Sbjct: 318 SASDSEDEGGEEEGDKKKKGGRSFQSTHRRNIMRGQHEKEVTERKRKQEEQGESELQNKE 377
Query: 743 EAVE-EIKQNEKQKEMS 758
E + E+K+ EK++E S
Sbjct: 378 EGKKTEVKKTEKKRETS 394
Score = 38 (18.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 210 RKRSGGSRLQSTQR 223
+K+ GG QST R
Sbjct: 333 KKKKGGRSFQSTHR 346
>FB|FBgn0036203 [details] [associations]
symbol:Muc68D "Mucin 68D" species:7227 "Drosophila
melanogaster" [GO:0016490 "structural constituent of peritrophic
membrane" evidence=ISS] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0008061 "chitin binding" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=ISM] [GO:0005201 "extracellular
matrix structural constituent" evidence=ISM] InterPro:IPR002557
Pfam:PF01607 PROSITE:PS50940 SMART:SM00494 GO:GO:0005576
EMBL:AE014296 eggNOG:NOG12793 GO:GO:0031012 GO:GO:0008061
GO:GO:0005201 CAZy:CBM14 Gene3D:2.170.140.10 SUPFAM:SSF57625
GO:GO:0006030 GeneTree:ENSGT00700000104174 EMBL:AY075323
RefSeq:NP_648504.2 UniGene:Dm.20068 SMR:Q9VTN2 MINT:MINT-900668
STRING:Q9VTN2 EnsemblMetazoa:FBtr0076119 GeneID:39326
KEGG:dme:Dmel_CG6004 UCSC:CG6004-RB CTD:39326 FlyBase:FBgn0036203
InParanoid:Q9VTN2 OMA:STESSQD OrthoDB:EOG4WSTSF GenomeRNAi:39326
NextBio:813085 Uniprot:Q9VTN2
Length = 1514
Score = 152 (58.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 139/751 (18%), Positives = 269/751 (35%)
Query: 76 EAFTEEKKQSLLTKRQGRGADFVRAVQEIIDSY-EKLKKQDQVDSNSGDELTVANGGNSV 134
E+ + E Q T+ + + + ++ E + DS + + + + G S
Sbjct: 461 ESSSTESSQDSTTQESSSSTEGPLSTESSTEATNESSSTESSQDSTTQESSSSSEGPLST 520
Query: 135 NSISHLKDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSE 194
S + + + ++E++ DS + S+S+ L+ TE S + + + + Q S
Sbjct: 521 ESSTEATNESSSTESSQDSTTQESSSSTESPLS--TEPSTEANESSSTESSQDSTTQESS 578
Query: 195 NLVAKATPVLTTYSSRKRSGGSRLQSTQRMAPSTRRSRSSTMVESCRLQNLMMPYNNEGK 254
+ + P+ T S+ + S +S+Q +T+ S SST E L + EG
Sbjct: 579 S--STEDPLSTESSTEATNESSSTESSQDS--TTQESSSST--EG----PLSTESSTEGS 628
Query: 255 NAEGISAKSILDGSLIRNKRTRKSP----DGSECNDLDSSALMSNGSIEDNSSEI---VT 307
N E S +S D + ++ + +SP +E N+ S+ + + +++SS ++
Sbjct: 629 N-ESSSTESSQDSTTQKSSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLS 687
Query: 308 VESDAFSLNEGSTVDSGCKVEDSETVLECLDGDEMLSKRLDFQIXXXXXXXXXXXXXXXX 367
E NE S+ +S +DS T + LS +
Sbjct: 688 TEPST-EANESSSTESS---QDSTTQESSSSSEGPLSTESSTEANESSSTESSQDSTTQE 743
Query: 368 CNDAVDPPARINTATEVDVSTRNTCHSSENTGGNLDERDFKEDGDEHLPLVKRARVRMGK 427
+ + + P +TE + S+ +T S ++T E +G A
Sbjct: 744 SSSSTESPLSTEPSTEANESS-STESSQDST---TQESSSSTEGPLSTEPSTEANESSST 799
Query: 428 PXXXXXXXXXXXXXXXPSKDTAVNLVEHISPSLNNYDEGFTEKGPSLVKESTDSVSPSKV 487
T + + S S + + T++ S ++ + S ++
Sbjct: 800 ESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQDSTTQESSSSTEDPLSTESSTEA 859
Query: 488 CSEVSGNRPQLWKGTTNQSFGCSADGEAALPPSKRLHRALEAMSANAAEEGQASVQASSL 547
E S TT +S S+ E L + E+ S ++++ +SS
Sbjct: 860 TYESSSTESSQ-DSTTQES---SSSTEGPLSTESSTEGSNESSSTESSQDSTTQESSSST 915
Query: 548 INT-SINGCCVNSICKCSHETVDSRERSGSGLQNVPTCDQLSENCN-SQKQESFRDDVGS 605
+ S + + + DS + S P + S N S ES +D S
Sbjct: 916 ESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTESSTEANESSSTESSQD---S 972
Query: 606 VDNVDGKDLPGSPFSVHTIQTAVQTQTPVNILPDPKKRHSSFQLYQNSLDQLSLKDEGSA 665
G P S + + D + SS ++ LS + A
Sbjct: 973 TTQESSSSTEG-PLSTESSTEGSNESSSTESSQDSTTQESS----SSTESPLSTEPSTEA 1027
Query: 666 EDLQLKDSRVENVDKEFNTSALVELSLDP---VSGADESVKLSPQNGSNELQYSVQG-MS 721
+ +S ++ +E ++S LS + S S + S + + E S +G +S
Sbjct: 1028 NESSSTESSQDSTTQESSSSTEGPLSTESSTEASNESSSTESSQDSTTQESSSSTEGPLS 1087
Query: 722 YENSESLKSQIDDNCHI-NARCEAVEEIKQNEKQKEMS-SVSISDDHLGDKGV--ASVLF 777
E+S + + + N+ + N E S S +DD G+ G +
Sbjct: 1088 TESSTEVTQEPSPTESLPNSSTQGTPCTTDNPSSLEPSPSTPGNDDDSGNSGSENGNSST 1147
Query: 778 SSSPAEGVDSPARVSPPNTSLCHVSTSESAN 808
S SP D+P+ P ++S + +S N
Sbjct: 1148 SGSPCT-TDNPS--DPESSSSTPGNDDDSGN 1175
Score = 133 (51.9 bits), Expect = 0.00026, P = 0.00026
Identities = 128/718 (17%), Positives = 258/718 (35%)
Query: 106 DSYEKLKKQDQVDSNSGDELTVAN--GGNSVNSISHLKDRT-EASEATLDSQMKPSNSTA 162
+S + Q+ S G T ++ N +S +D T + S ++ + + +ST
Sbjct: 432 ESSQDSTTQESSSSTEGPLSTESSTEATNESSSTESSQDSTTQESSSSTEGPLSTESSTE 491
Query: 163 GDGLNLPTEDSPAGRQLDALPAKE-PLPEQPSENLVAKATPVLTTYSSRKRSGGSRLQST 221
+ TE S ++ + E PL + S +++ ++ S + S +S
Sbjct: 492 ATNESSSTESSQDSTTQESSSSSEGPLSTESSTEATNESSSTESSQDSTTQESSSSTESP 551
Query: 222 QRMAPSTRRSRSSTMVES--CRLQNLMM----PYNNEGKNAEGISAKSILDGSLIRNKRT 275
PST + SS+ S Q P + E + E + S + S ++ T
Sbjct: 552 LSTEPSTEANESSSTESSQDSTTQESSSSTEDPLSTES-STEATNESSSTESS--QDSTT 608
Query: 276 RKSPDGSECN-DLDSSALMSNGSIEDNSSEIVTVESDAFSLNEGSTVDSGCKVEDSETVL 334
++S +E +SS SN S SS+ T + + S + + + +S +
Sbjct: 609 QESSSSTEGPLSTESSTEGSNESSSTESSQDSTTQKSSSSTESPLSTEPSTEANESSSTE 668
Query: 335 ECLDGD-EMLSKRLDFQIXXXXXXXXXXXXXXXXCNDAVDPPARINTATEVDVSTRNTCH 393
D + S + + D+ + ++++E +ST ++
Sbjct: 669 SSQDSTTQESSSSTEGPLSTEPSTEANESSSTESSQDSTTQES--SSSSEGPLSTESSTE 726
Query: 394 SSEN--TGGNLDERDFKEDGDEHLPLVKRARVRMGKPXXXXXXXXXXXXXXXPSKDTAVN 451
++E+ T + D + PL + S + ++
Sbjct: 727 ANESSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLS 786
Query: 452 LVEHISPSLNNYDEGFTEKGP-SLVKESTDSVS-PSKVCSEVSGNRPQLWKG----TTNQ 505
PS + TE S +ES+ S P S N + TT +
Sbjct: 787 T----EPSTEANESSSTESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQDSTTQE 842
Query: 506 SFGCSADGEAALPPSKRLHRA--LEAMSANAAEEGQASVQASSLINTSINGCCVNSICKC 563
S + D + ++ + + E+ + +E +S + +S G +S +
Sbjct: 843 SSSSTEDPLSTESSTEATYESSSTESSQDSTTQESSSSTEGPLSTESSTEGSNESSSTES 902
Query: 564 SHETVDSRERSGSGLQNVPTCDQLSENCNSQKQESFRDDVGSVDNVDGKDLPGSPFSVHT 623
S ++ + + S S ++ + + +E S ES +D S G P S +
Sbjct: 903 SQDS--TTQESSSSTESPLSTEPSTEANESSSTESSQD---STTQESSSSTEG-PLSTES 956
Query: 624 IQTAVQTQTPVNILPDPKKRHSSFQLYQNSLDQLSLKDEGSAEDLQLKDSRVENVDKEFN 683
T + D + SS + L S EGS E + S+ ++ +E +
Sbjct: 957 -STEANESSSTESSQDSTTQESSSST-EGPLSTES-STEGSNESSSTESSQ-DSTTQESS 1012
Query: 684 TSALVELSLDPVSGADES--VKLSPQNGSNELQYSVQG-MSYENSESLKSQIDDNCHINA 740
+S LS +P + A+ES + S + + E S +G +S E+S ++ + +
Sbjct: 1013 SSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTESSTEASNE-SSSTESSQ 1071
Query: 741 RCEAVEEIKQNEKQKEM-SSVSISDDHLGDKGVASVLFSSSPAEGVDSPARVSP-PNT 796
E E SS ++ + + + + +P D+P+ + P P+T
Sbjct: 1072 DSTTQESSSSTEGPLSTESSTEVTQEPSPTESLPNSSTQGTPCT-TDNPSSLEPSPST 1128
>ZFIN|ZDB-GENE-050522-104 [details] [associations]
symbol:psip1 "PC4 and SFRS1 interacting protein 1"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00855 ZFIN:ZDB-GENE-050522-104 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 HOGENOM:HOG000230488
InterPro:IPR021567 Pfam:PF11467 HOVERGEN:HBG108300 EMBL:BC076307
IPI:IPI00509636 UniGene:Dr.76433 ProteinModelPortal:Q6DGN4
STRING:Q6DGN4 PRIDE:Q6DGN4 InParanoid:Q6DGN4 Bgee:Q6DGN4
Uniprot:Q6DGN4
Length = 418
Score = 144 (55.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 52/181 (28%), Positives = 82/181 (45%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAF-TE 80
+K GDL+ AK+KG+P WPA + E K +FFFGT + AF P D+ + T
Sbjct: 17 FKAGDLIFAKMKGYPHWPARIDEIPDGAVKPSNIKFPIFFFGTHETAFLGPKDIFPYLTN 76
Query: 81 EKKQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
+ K KR+G F + EI + +V+ N G ++ G S+ +S
Sbjct: 77 KDKYGKPNKRKG----FNEGLWEI-------ENNPKVELN-GHKVKKV-GEVSIKDLSS- 122
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAK-EPLPEQPSENLVAK 199
+ + + T +Q+ S D +++ ED D K E L ++ S N+ AK
Sbjct: 123 NEEGDDEKRTKSAQIAHSEGLE-DEVDIEKEDGGDMDVSDQRLVKDEDLSQKDSTNVTAK 181
Query: 200 A 200
A
Sbjct: 182 A 182
>UNIPROTKB|Q5XXA9 [details] [associations]
symbol:PSIP1 "Lens epithelium-derived growth factor"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IDA]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0009408 "response to heat" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005720
"nuclear heterochromatin" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0033613 "activating transcription factor binding" evidence=ISS]
[GO:0000395 "mRNA 5'-splice site recognition" evidence=ISS]
[GO:0097100 "supercoiled DNA binding" evidence=ISS] [GO:0001105
"RNA polymerase II transcription coactivator activity"
evidence=ISS] InterPro:IPR017956 SMART:SM00384 Pfam:PF00855
GO:GO:0006979 GO:GO:0005720 GO:GO:0003682 GO:GO:0009408
GO:GO:0001105 GO:GO:0035327 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0097100 GO:GO:0033613 HOGENOM:HOG000230488
InterPro:IPR021567 Pfam:PF11467 eggNOG:NOG316844 GO:GO:0000395
CTD:11168 HOVERGEN:HBG108300 OrthoDB:EOG4V438N EMBL:AY728140
IPI:IPI00578410 RefSeq:NP_001026781.2 UniGene:Gga.22262
ProteinModelPortal:Q5XXA9 SMR:Q5XXA9 STRING:Q5XXA9 PRIDE:Q5XXA9
GeneID:431605 KEGG:gga:431605 InParanoid:Q5XXA9 NextBio:20830891
Uniprot:Q5XXA9
Length = 579
Score = 160 (61.4 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 59/211 (27%), Positives = 89/211 (42%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDL+ AK+KG+P WPA V E K+ +FFFGT + AF P D+ ++E
Sbjct: 5 FKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKMPIFFFGTHETAFLGPKDIFPYSEN 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI D+ K+K Q S+ ++ +S
Sbjct: 65 KDKYGKPNKRKG----FNEGLWEI-DNNPKVKFSHQ-PSHPAVNTSIKETIQE-SSPEAA 117
Query: 141 KDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAK- 199
+ E S A P GD N P E +++ + E E+ S+ V K
Sbjct: 118 EGSEEKSGAKRRKPSIPKLPPKGDN-NSPAEAEAEEKEMHSTKEDEEPSEKNSKEGVVKT 176
Query: 200 --ATPVLTTYSSRKRSGGSRLQSTQRMAPST 228
A+ RKR + +S + +T
Sbjct: 177 NDASIPKVARRGRKRKAEKQAESEEAAVVAT 207
Score = 39 (18.8 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 1059 EHNSEIPEERDANPSMKKHRHILEEVDGELE 1089
+HN E EE+D K + EE ELE
Sbjct: 540 QHNGENAEEKDKLEVASKKKTCGEE--SELE 568
Score = 38 (18.4 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 210 RKRSGGSRLQSTQR 223
+K+ GG QST R
Sbjct: 333 KKKKGGRSFQSTHR 346
>MGI|MGI:1194492 [details] [associations]
symbol:Hdgfrp2 "hepatoma-derived growth factor, related
protein 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017923 MGI:MGI:1194492 Pfam:PF00855
GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 Gene3D:1.20.930.10
GeneTree:ENSGT00530000063013 CTD:84717 eggNOG:NOG80217
HOGENOM:HOG000230488 HOVERGEN:HBG099722 InterPro:IPR021567
Pfam:PF11467 EMBL:D63850 EMBL:AK143616 EMBL:AK144669 EMBL:AK146813
EMBL:AK146918 EMBL:BC003741 IPI:IPI00116442 IPI:IPI00875101
IPI:IPI00885518 PIR:JC5662 RefSeq:NP_032259.1 UniGene:Mm.279188
ProteinModelPortal:Q3UMU9 SMR:Q3UMU9 STRING:Q3UMU9
PhosphoSite:Q3UMU9 PaxDb:Q3UMU9 PRIDE:Q3UMU9
Ensembl:ENSMUST00000002911 GeneID:15193 KEGG:mmu:15193
UCSC:uc008dau.1 UCSC:uc008dav.2 UCSC:uc008daw.1 InParanoid:Q3UMU9
OMA:ANKEVME OrthoDB:EOG4WWRKK NextBio:287723 Bgee:Q3UMU9
CleanEx:MM_HDGFRP2 Genevestigator:Q3UMU9 Uniprot:Q3UMU9
Length = 669
Score = 128 (50.1 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDLV AK+KG+P WPA + + K +FFFGT + AF P D+ + +
Sbjct: 5 FKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDKC 64
Query: 82 K-KQSLLTKRQG 92
K K KR+G
Sbjct: 65 KDKYGKPNKRKG 76
Score = 73 (30.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 34/141 (24%), Positives = 63/141 (44%)
Query: 80 EEKKQSLLTKRQGRGADFVRAVQEII-DSYEKLKKQDQVDSNSGDELTVANGGNSVNSIS 138
EE+++ L +R+ + +R ++E + E+ K++ + +SG+EL V S
Sbjct: 325 EERRRELEARRRREQEEELRRLREQEREEKERRKERAERGGSSGEEL---EDEEPVKKRS 381
Query: 139 HLKDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVA 198
K R + ++ DS+ P +G L + G + P ++ +P E
Sbjct: 382 R-KARGRGTPSSSDSE--PEGELGKEGKKLAKKSQLPGSESARKPGQKEKRGRPDEK--P 436
Query: 199 KATPVLTTYSSRKRSGGSRLQ 219
+A PV +RKRS G L+
Sbjct: 437 RARPVKVE-RTRKRSEGLSLE 456
Score = 56 (24.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 25/99 (25%), Positives = 41/99 (41%)
Query: 136 SISHLKDRTEA---SEATLDSQMKPSNSTAGDGLNLPTEDSP-AGRQLDALPAKEPLPEQ 191
S+S ++ +E+ SE T D P TA P P GR+ +P+ +
Sbjct: 181 SVSPSEEDSESPSESEKTSDQDFTPEKKTAAR----PPRRGPLGGRKKKKVPSASD-SDS 235
Query: 192 PSENLVAKATPVLTTYSSRKRSGGSRLQSTQRMAPSTRR 230
+++ AK PV+T S S S S+ S ++
Sbjct: 236 KADSDGAKEEPVVTAQPSPSSSSSSSSSSSSDSDVSVKK 274
Score = 50 (22.7 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 33/135 (24%), Positives = 55/135 (40%)
Query: 153 SQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAKATPVLTTYSSRKR 212
S S+S++ D ++ + P GR+ PA++P P+ + P ++ S
Sbjct: 256 SSSSSSSSSSSDS-DVSVKKPPRGRK----PAEKPPPKPRGRRPKPERPPSTSSSDSDSD 310
Query: 213 SGG-SRLQSTQRMAPSTRRS-----RSSTMVESCRLQNLMMPYNNEGKN-AE--GISAKS 263
SG R+ +R RR R E RL+ K AE G S +
Sbjct: 311 SGEVDRISEWKRRDEERRRELEARRRREQEEELRRLREQEREEKERRKERAERGGSSGEE 370
Query: 264 ILDGSLIRNKRTRKS 278
+ D ++ KR+RK+
Sbjct: 371 LEDEEPVK-KRSRKA 384
Score = 40 (19.1 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 694 PVSGADESVKLSPQNGSNELQYSVQGMSYENSE-SLKSQIDDN 735
P G+ E + SP++ S+ + + +E + + +S DDN
Sbjct: 624 PRGGSSEELHDSPRDNSDPAKPGNERQDHERTRLASESANDDN 666
Score = 38 (18.4 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 939 PRLLSAAAPPGNVAQENRR 957
PR S A PGN Q++ R
Sbjct: 636 PRDNSDPAKPGNERQDHER 654
>UNIPROTKB|E1BHR3 [details] [associations]
symbol:HDGFRP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF00855 GO:GO:0005634 GO:GO:0005737
InterPro:IPR000313 PROSITE:PS50812 GeneTree:ENSGT00530000063013
OMA:NEKGGSK EMBL:DAAA02052272 IPI:IPI00971492
Ensembl:ENSBTAT00000024660 Uniprot:E1BHR3
Length = 185
Score = 121 (47.7 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 37/117 (31%), Positives = 54/117 (46%)
Query: 32 VKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEEK-KQSLLTKR 90
+KG+P WPA + E + K +FFFGT + AF P D+ + E K K KR
Sbjct: 1 MKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKEYKDKFGKSNKR 60
Query: 91 QGRGADFVRAVQEIIDSYE-KLKKQDQVDSNSGDELTVANGGNSVNSISHLK-DRTE 145
+G F + EI ++ K + S E T GGN+ ++ S + DR E
Sbjct: 61 KG----FNEGLWEIENNPGVKFTGYQAIQQQSSSE-TEGEGGNTADASSEEEGDRVE 112
Score = 46 (21.3 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 272 NKRTRKSP---DGSECNDLDSSALMSNGSIEDNSSEIVTVESDAFSLNEGS 319
+K++RKSP D +C + ++ + S G N + T SD +EG+
Sbjct: 138 SKQSRKSPGDEDDKDCKEEENKS-SSEGGDAGNDTRNTT--SDLQKTSEGT 185
>DICTYBASE|DDB_G0280177 [details] [associations]
symbol:DDB_G0280177 "Hepatoma-derived growth
factor-related protein 2" species:44689 "Dictyostelium discoideum"
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0280177
Pfam:PF00855 EMBL:AAFI02000035 InterPro:IPR000313 PROSITE:PS50812
RefSeq:XP_641286.1 ProteinModelPortal:Q54VR9
EnsemblProtists:DDB0206422 GeneID:8622418 KEGG:ddi:DDB_G0280177
eggNOG:NOG289843 InParanoid:Q54VR9 OMA:SKRESKW Uniprot:Q54VR9
Length = 1221
Score = 146 (56.5 bits), Expect = 9.6e-06, Sum P(4) = 9.6e-06
Identities = 67/297 (22%), Positives = 125/297 (42%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKK-------VLVFFFGTQQIAFCNPAD 74
++ G +V ++ G+P WPA V +P K SA K +L+ FF + A+ P
Sbjct: 18 FRYGQVVYGRMPGYPQWPARVHDPSKSISSAVRKAQPKSSPIILLHFFSSNDYAWLTPDS 77
Query: 75 VEAFTEEKKQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSV 134
V F E K Q + + +A I Y K + + DS+S + + G+
Sbjct: 78 VTDFLENHPH----KNQPKSKQWQKAYNAAI-KYLK-NSESEPDSDSDGDYS----GSDD 127
Query: 135 NSISHLKDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSE 194
++I +E+ + + K ST+G ++ S + + D+ S
Sbjct: 128 SNIESASSSSESESEKVKTSKKSEKSTSGSS-SIINNSSSSSKSSDSKKKSSSSSSSSSS 186
Query: 195 NLVA--KATPVLTTYSSRKRSGGS-RLQSTQR-MAPSTRRSRSSTM-----VESCRLQNL 245
+L + K+ +T S + +S GS ++++++ P ++ SS+ E +L+
Sbjct: 187 SLSSNLKSESKKSTSSLKSKSNGSSKVKASKPDKTPEPIKTESSSTKSEGKTEKAKLKKE 246
Query: 246 MMPYNNEGKNAEGISAKSILDGSLIRNKRTRKS-PDGSECNDLDSSALMSNGSIEDN 301
+ ++ KS + S KR KS SE +D DS +L + S+ D+
Sbjct: 247 TVSPTLSSSSSSSSKKKSSTNSS--NGKRKIKSISSDSESSDSDSDSLSDSDSMSDS 301
Score = 62 (26.9 bits), Expect = 9.6e-06, Sum P(4) = 9.6e-06
Identities = 37/168 (22%), Positives = 59/168 (35%)
Query: 1166 QNMQNDGQQSVTQQSVAPRINSTVSTNAVHYHASECRDH---QMPMQMPESTSSFGCYSM 1222
Q Q QQ QQ ++P N HYH S +P G Y
Sbjct: 741 QQQQQQQQQQQQQQPISPYSNRNDLDRRDHYHDSSLSPSPYKSRDQSLPPRRRDDG-YLP 799
Query: 1223 RPSNNFQQTDGPRFHNKPYPPRPPHAPQSNHFSYVQASQSA-KSRREAPHPSNSHRFHPH 1281
PS + N+ + + S+ + +++ + R+ P P +S P
Sbjct: 800 PPSQTQTNSSSTLPQNRDLRIND-YNDRDFRDSHPRDTRTPIRDLRDRPPPPSSSSSSPA 858
Query: 1282 PNFDGGNF----YNNHDR-MKPGPYEHRESWRFSAPSFSGPRYPDEAR 1324
P G N+ Y+ R ++ GP +R++ P RY D R
Sbjct: 859 PLGGGSNYRDPYYDGRGRGLRGGPPPYRDNRDNIRPPVD--RYRDNNR 904
Score = 51 (23.0 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 38/173 (21%), Positives = 62/173 (35%)
Query: 1157 DSYSNGASMQNMQNDGQQSVTQQSVAPRINSTVSTNAVHYHASECRDHQMPMQMPESTSS 1216
DSY++ M + D S T S A R +Y +S +D + +TS+
Sbjct: 565 DSYTSKYGM-GINPDPYTSYTSNSSATRYVDD------YYASSLFKDPLLSSSSTTTTST 617
Query: 1217 FGCYSMRPSNNFQQTDGPRFHNKPYPPRPPHAPQSNHFSYVQASQSAKSRREAPHPSNSH 1276
+ P +Q PY P + S+ + S S + + S+S
Sbjct: 618 --TTTPLPKTYYQTYSVIDVQKSPYSSYKPTSSISSSTTSTPISLSTTTTTSSTSSSSSS 675
Query: 1277 RFHPHPNFDGGNFYN--NHDRMKPGPYEHRESWRFSAPSFS--GPRYPDEARE 1325
P N + Y+ NH ++ +S R S P P Y D+ R+
Sbjct: 676 STQPPHNQSSTSLYSPHNHHLHHHSHHDILDS-RISPPKQHPIDPYYEDDYRD 727
Score = 44 (20.5 bits), Expect = 9.6e-06, Sum P(4) = 9.6e-06
Identities = 10/52 (19%), Positives = 26/52 (50%)
Query: 531 SANAAEEGQASVQASSLINTSINGCCVNSICKCSHETVDSRERSGSGLQNVP 582
+++ ++ ++QA ++ T+I G +N +++ S+ G G+ P
Sbjct: 530 TSDIRQQSSPTIQAHNMSATTIGGTSINGTTSSIYDSYTSKY--GMGINPDP 579
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 14/62 (22%), Positives = 28/62 (45%)
Query: 445 SKDTAVNLVEHISPSLNNYDEGFTEKGPSLVKESTDSVSPSKVCSEVSGNRPQLWKGTTN 504
S DT+ ++ + SP++ ++ T G + + +T S+ S G P + T+
Sbjct: 527 SIDTS-DIRQQSSPTIQAHNMSATTIGGTSINGTTSSIYDSYTSKYGMGINPDPYTSYTS 585
Query: 505 QS 506
S
Sbjct: 586 NS 587
Score = 39 (18.8 bits), Expect = 9.6e-06, Sum P(4) = 9.6e-06
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 617 SPFSVHTIQTAVQTQTPVNILPDPKKRHSSFQLY 650
+P S+ T T T + + P SS LY
Sbjct: 656 TPISLSTTTTTSSTSSSSSSSTQPPHNQSSTSLY 689
Score = 39 (18.8 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 598 SFRDDVGSVDNVDGKDLPGSPFSVHTIQTAVQTQTPVNILPDPKKR--HSSFQLYQNSLD 655
S R+D+ D+ L SP+ Q+ + LP P + +SS L QN
Sbjct: 760 SNRNDLDRRDHYHDSSLSPSPYKSRD-QSLPPRRRDDGYLPPPSQTQTNSSSTLPQNRDL 818
Query: 656 QLSLKDEGSAEDLQLKDSR 674
+++ ++ D +D+R
Sbjct: 819 RINDYNDRDFRDSHPRDTR 837
>WB|WBGene00015501 [details] [associations]
symbol:C06A5.3 species:6239 "Caenorhabditis elegans"
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] Pfam:PF00855
GO:GO:0006898 GO:GO:0040035 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GeneTree:ENSGT00530000063013 eggNOG:NOG316844
EMBL:FO080102 GeneID:172274 KEGG:cel:CELE_C06A5.3 CTD:172274
RefSeq:NP_491731.2 ProteinModelPortal:Q5TYK5 SMR:Q5TYK5
STRING:Q5TYK5 PaxDb:Q5TYK5 PRIDE:Q5TYK5 EnsemblMetazoa:C06A5.3b
UCSC:C06A5.3b WormBase:C06A5.3b HOGENOM:HOG000017240
InParanoid:Q5TYK5 OMA:HRWRCVD NextBio:874783 Uniprot:Q5TYK5
Length = 783
Score = 133 (51.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 25 GDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEEKKQ 84
GDL+ AK+KGFP WPA V E + A +++ V FFGT + +F P D+ + +
Sbjct: 16 GDLIWAKMKGFPPWPAKVLERSE---DAPARRIPVMFFGTLETSFMKPNDLSDYLPNRLI 72
Query: 85 SLLTKRQGRGADFVRAVQEI 104
+ ++Q DF +AVQEI
Sbjct: 73 HEIPRKQ---KDFNKAVQEI 89
Score = 52 (23.4 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 24/94 (25%), Positives = 47/94 (50%)
Query: 217 RLQSTQRMAPSTR-RSRSSTMVESCRLQNLMMPYNNEGKNAEGI--SAKSILDGSLIRNK 273
+++ T+ + ST+ RSR+S+ + +L MM + N+E S + +L+ +L+
Sbjct: 141 KMRGTRSGSASTKTRSRASSNASASKLLRDMMRKERQRLNSESSTGSRRKLLNNALLGGG 200
Query: 274 RTRKSPD--GSECND-LDSSALMSN---GSIEDN 301
+ D G++ D D +AL + G+ E N
Sbjct: 201 GAPSTSDAFGNDYADSTDFNALFGDAILGNFELN 234
>RGD|621013 [details] [associations]
symbol:Hdgfrp2 "hepatoma-derived growth factor-related protein 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR017923
Pfam:PF00855 RGD:621013 GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 Gene3D:1.20.930.10
CTD:84717 HOVERGEN:HBG099722 InterPro:IPR021567 Pfam:PF11467
EMBL:AF355102 EMBL:BC071178 EMBL:BC087695 IPI:IPI00391633
IPI:IPI00886466 RefSeq:NP_598232.1 UniGene:Rn.29462 HSSP:Q9JMG7
ProteinModelPortal:Q925G1 SMR:Q925G1 PRIDE:Q925G1 GeneID:171073
KEGG:rno:171073 NextBio:621679 Genevestigator:Q925G1 Uniprot:Q925G1
Length = 669
Score = 138 (53.6 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 69/281 (24%), Positives = 107/281 (38%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDLV AK+KG+P WPA + + K +FFFGT + AF P D+ + +
Sbjct: 5 FKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDKC 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVAN-GGNSVNSISH 139
K K KR+G F + EI ++ S+S E A+ GG S
Sbjct: 65 KDKYGKPNKRKG----FNEGLWEIQNNPHASYSAPLPVSSSDSEAPEADLGGGS------ 114
Query: 140 LKDRTEASEATLDSQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAK 199
D + EA + +TA G DS L K P+ + K
Sbjct: 115 --DADKEKEARRVMTVTAVTTTATSGRTESDSDSDKNSDHSGLKRKTPVLKMSVSKRARK 172
Query: 200 ATPVLTTYSSRKRSGGSRLQS-TQRMAPSTRRSRSSTMVESCRLQNLMMPYNNEGKNAEG 258
A+ L S S S +++ + T+ + R L + +A
Sbjct: 173 ASSDLDQASVSPSEEDSESPSESEKTSDQDFTPEKKTIARAPRRAPLGGRKKKKVPSASD 232
Query: 259 ISAKSILDGSLIRNKRTRKSPDGSECNDLDSSALMSNGSIE 299
+++ DG+ T + S + SSA S+ SI+
Sbjct: 233 SDSRADSDGAKEEPVVTAQPSPSSSSSSSSSSASDSDVSIK 273
Score = 45 (20.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 689 ELSLDPVSGADESVKLSPQNGSNELQYSVQGMSYENSESLKSQIDDN 735
+L P G+ E + SPQ+ S+ + + +E + DD+
Sbjct: 619 DLEDGPRGGSSEELHDSPQDSSDPARPGNEHQDHERMQLASESADDD 665
>UNIPROTKB|Q939N5 [details] [associations]
symbol:gspB "Platelet binding protein GspB" species:1302
"Streptococcus gordonii" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00746 GO:GO:0005618 GO:GO:0005576
InterPro:IPR019948 InterPro:IPR019931 TIGRFAMs:TIGR01167
PROSITE:PS50847 EMBL:AY028381 PDB:3QC5 PDB:3QC6 PDB:4I8E
PDBsum:3QC5 PDBsum:3QC6 PDBsum:4I8E IntAct:Q939N5
InterPro:IPR022263 InterPro:IPR026465 TIGRFAMs:TIGR03715
TIGRFAMs:TIGR04224 Uniprot:Q939N5
Length = 3072
Score = 136 (52.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 153/823 (18%), Positives = 280/823 (34%)
Query: 101 VQEIID-SYEKLKKQDQVDSNSGDELTVANGGNS-VNSISHLKDRTEASEA--TLDSQMK 156
V+E + S L+ QD ++SN +TV+N G + + KD + S+ T +
Sbjct: 547 VREAVKKSNPDLRAQDVLNSNYVTGITVSNNGTTTITYRDGRKDIIDGSKFIDTRAGSIS 606
Query: 157 PSNSTAGD-GLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAKATPVLTTYS---SRKR 212
S ST+ ++L +S A L + +K L S V+ +T + T+ S S
Sbjct: 607 KSQSTSNSISVSLSKSES-ASASL--VTSK--LNSISSSASVSASTSISTSGSVSASESA 661
Query: 213 SGGSRLQSTQRMAPSTRRSRSSTMVESCRLQNLMMPYNNEGKNAEGISAKSILDGSLIRN 272
S S + +++ + S S S + S + + +A SA + S ++
Sbjct: 662 STSSSVSASESASTSASVSASESASTSASVSASTSASTSASVSAS-TSASTSASTSASKS 720
Query: 273 KRTRKSPDGSECNDLDSSALMSNGSIEDNSSEIVTVESDAFSLNEGSTVDSGCKVEDSET 332
T S S +S S + S T S + S++ ++ + V SE+
Sbjct: 721 ASTSASVSASTSASTSASVSASESASTSASVSASTSASTSASVSASTSASTSASVSASES 780
Query: 333 VLECLDGDEMLSKRLDFQIXXXXXXXXXXX-XXXXXCNDAVDPPARINTATEVDVSTRNT 391
S + + + A + +T VS +
Sbjct: 781 ASTSASVSASTSASTSASVSASESASTSASVSASTSASTSASVSASASASTSASVSASTS 840
Query: 392 CHSSENTGGNLDERDFKEDGDEHLPLVKRARVRMGKPXXXXXXXXXXXXXXXPSKDTAVN 451
+S + + A V + + +A
Sbjct: 841 ASTSASVSASASAST-SASVSASTSASTSASVSASESASTSASVSASESASTSASVSASE 899
Query: 452 LVEHISPSLNNYDEGFTEKGPSL-VKESTD-SVSPSKVCSEVSGNRPQLWKGTTNQSFGC 509
S S++ + T S ST SVS S+ S S + +T+ S
Sbjct: 900 SAS-TSASVSASESASTSASVSASTSASTSASVSASESAS-TSASVSASESASTSASVSA 957
Query: 510 SADGEAALPPSKRLHRALEA-MSANAAEEGQASVQASSLINTSIN---GCCVNSICKCSH 565
S + S + A +SA+ + ASV AS+ +TS + ++ S
Sbjct: 958 SESASTSASVSASESASTSASVSASTSASTSASVSASTSASTSASVSASTSASTSASVSA 1017
Query: 566 ETVDSRERSGSGLQNVPTCDQLS--ENCNSQKQESFRDDVGSVDNVDGKDLPGSPFSVHT 623
T S S S ++ T +S E+ ++ S + +V + + SV
Sbjct: 1018 STSASTSASVSASESASTSASVSASESASTSASVSASTSASTSASVSASESASTSASVSA 1077
Query: 624 IQTAVQTQTPVNILPDPKKRHSSFQLYQNSLDQLSLK-DEGSAEDLQLKDSRVENVDKEF 682
++A + + + +S +++ S+ E S+ + S E+
Sbjct: 1078 SESASTSAS--ESASESASTSASVSASESASTSASVSASESSSTSASVSAS--ESSSTSA 1133
Query: 683 NTSALVELSLDPVSGADESVKLSPQNGSNELQYSVQGMSYENSESLKSQID--DNCHINA 740
+ SA S A ES S ++E + +S S S + + ++ +A
Sbjct: 1134 SVSASESASTSASVSASESASTSASESASESASTSASVSASESASTSASVSASESASTSA 1193
Query: 741 RCEAVEEIKQNEKQKEMSSVSISDDHLGDKGVASVLFSSSPAEGVDSPARVSPPNTSL-- 798
A E + + S S S + AS S S +E + A VS ++
Sbjct: 1194 SVSASESVSTSASVSASESASTSASVSASES-ASTSASESASESASTSASVSASESASTS 1252
Query: 799 CHVSTSESANIVQXXXXXPYARSQYKKSLGAPVADEGKVDTTLTQRPKSVGKWSSCSEAH 858
VS SESA+ A + S + V + + + S +
Sbjct: 1253 ASVSASESASTSASVSASTSASTSASVSASESASTSASVSASESASTSASVSASESASTS 1312
Query: 859 AALSSFEAVLGSLT-RTKESIGRATRI-AIDCAKFGVSSKVVE 899
A++S+ E+V S + ES + + A + A S E
Sbjct: 1313 ASVSASESVSTSASVSASESASTSASVSASESASTSASESASE 1355
Score = 59 (25.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/113 (19%), Positives = 54/113 (47%)
Query: 1152 SCAFSDSYSNGASM---QNMQNDGQQSVTQQ-SVAPRINSTVSTNAVHYHASECRDHQM- 1206
S + S+S S AS+ ++ + SV++ SV+ ++ ++ST+ +H ++ + ++
Sbjct: 2940 SVSASESASTSASVSASESASTNASVSVSESMSVSESLSLSISTSVLHSQLNDIYESELY 2999
Query: 1207 PMQMPESTSSFGCYSMRPSNNFQQTDGPRFHNKPYPPRPPHAPQSNHFSYVQA 1259
+ + ES S+ S S + + H++ + P +S + + + A
Sbjct: 3000 SLSLSESLSASQSLSQSLSESQSSSASQSMHDRISKGQLPRTGESENKASILA 3052
>UNIPROTKB|Q29NG1 [details] [associations]
symbol:GA18401 "Putative oxidoreductase GLYR1 homolog"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006115 InterPro:IPR008927 InterPro:IPR013328
InterPro:IPR015815 Pfam:PF03446 PROSITE:PS00895 InterPro:IPR016040
Pfam:PF00855 GO:GO:0000166 Gene3D:3.40.50.720 eggNOG:COG2084
GO:GO:0050662 GO:GO:0004616 GO:GO:0006098 Gene3D:1.10.1040.10
PANTHER:PTHR22981 SUPFAM:SSF48179 KO:K00020 EMBL:CH379060
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OrthoDB:EOG42BVQQ
RefSeq:XP_001356318.2 ProteinModelPortal:Q29NG1 GeneID:4816828
KEGG:dpo:Dpse_GA18401 FlyBase:FBgn0078403 InParanoid:Q29NG1
Uniprot:Q29NG1
Length = 612
Score = 127 (49.8 bits), Expect = 0.00037, P = 0.00037
Identities = 73/323 (22%), Positives = 125/323 (38%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEP--EKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFT 79
+K DL+ AK+KGF WP + EP + VFFFG++ A+ +++ F
Sbjct: 20 YKPKDLIWAKMKGFTPWPGMIVEPPLDLLTQQRRANTKCVFFFGSRNFAWIEENNIKPFE 79
Query: 80 EEKKQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISH 139
K+ L + + A F A+ +I D Y + +VD + V N +
Sbjct: 80 GPWKEELA--KVSKPAAFRHAMADI-DKY--IDDPAEVDDQINESCGVPNHATEAD-FDK 133
Query: 140 LKDRTEASEATLDSQMKPSNSTAGDGLNLP--TEDSPAGRQLD--ALP---AKEPLPEQP 192
++D ++ E +D+ +N + P +E D A P A P +
Sbjct: 134 IRDAVDSDENAVDADADANNGVVVHVVGSPDVSEAVEGENNADSSASPTVTAATPATAKS 193
Query: 193 SENLVAKATPVLTTYSSRKRSGGSRLQSTQRMAPSTRRSRSSTMVESCRLQNLMMPYNNE 252
KA PV + S+ K + S +S Q+ S ++ + +P
Sbjct: 194 PAKRTPKAKPV-SAVSATKAAKASTTKSAQKRRISAHQTPTGANTSG-------LPNAKR 245
Query: 253 GKNA-EGISAKSILDGSLIRNKRTRKSPDGSECNDLDSS--ALMSNGSIEDNSSEIVT-V 308
GK G + DG+ + R+ E +DL +S A + +I +VT
Sbjct: 246 GKRVVSGGATPGNFDGASSSSPTARRRV---EVDDLLASLAAKRAPNAIALLDRPVVTRP 302
Query: 309 ESDAFSLNEGSTVDSGCKVEDSE 331
E+ A +N S + + SE
Sbjct: 303 ETQAIDMNSRSNTLADRDIVPSE 325
>UNIPROTKB|K7EQZ6 [details] [associations]
symbol:HDGFRP2 "Hepatoma-derived growth factor-related
protein 2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR017923
Pfam:PF00855 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
EMBL:AC011498 Gene3D:1.20.930.10 InterPro:IPR021567 Pfam:PF11467
Ensembl:ENST00000586684 Uniprot:K7EQZ6
Length = 675
Score = 130 (50.8 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 44/144 (30%), Positives = 64/144 (44%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDLV AK+KG+P WPA + + K +FFFGT + AF P D+ + +
Sbjct: 5 FKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDKC 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI ++ S+S E AN + ++
Sbjct: 65 KDKYGKPNKRKG----FNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD 120
Query: 141 KDR----TEASEATLDSQMKPSNS 160
+DR A AT S S+S
Sbjct: 121 EDRGVMAVTAVTATAASDRMESDS 144
Score = 47 (21.6 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 18/78 (23%), Positives = 33/78 (42%)
Query: 153 SQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAKATPVLTTYSSRKR 212
S S+S++ ++ + P GR+ PA++PLP+ P P ++ S
Sbjct: 253 SASSSSSSSSSSDSDVSVKKPPRGRK----PAEKPLPK-PRGRKPKPERPPSSSSSDSDS 307
Query: 213 SGGSRLQSTQRMAPSTRR 230
R+ +R + RR
Sbjct: 308 DEVDRISEWKRRDEARRR 325
Score = 44 (20.5 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 738 INARCEAVEEIKQNEKQKEMSSVSISDDHLGDKGVASVLFSSSPAEGVDSPAR-VSPPNT 796
+ + EAV+++ + +KE + ++ + L + +A AE D P+ +S P
Sbjct: 551 LGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEELAGEEAPQEKAE--DKPSTDLSAPVN 608
Query: 797 SLCHVSTSESA 807
ESA
Sbjct: 609 GEATSQKGESA 619
>UNIPROTKB|I3L080 [details] [associations]
symbol:HDGFRP2 "Hepatoma-derived growth factor-related
protein 2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR017923
Pfam:PF00855 GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AC011498
Gene3D:1.20.930.10 ChiTaRS:HDGFRP2 InterPro:IPR021567 Pfam:PF11467
OMA:ANKEVME ProteinModelPortal:I3L080 SMR:I3L080 PRIDE:I3L080
Ensembl:ENST00000301284 PhylomeDB:I3L080 Bgee:I3L080 Uniprot:I3L080
Length = 676
Score = 130 (50.8 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 44/144 (30%), Positives = 64/144 (44%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDLV AK+KG+P WPA + + K +FFFGT + AF P D+ + +
Sbjct: 5 FKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDKC 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI ++ S+S E AN + ++
Sbjct: 65 KDKYGKPNKRKG----FNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD 120
Query: 141 KDR----TEASEATLDSQMKPSNS 160
+DR A AT S S+S
Sbjct: 121 EDRGVMAVTAVTATAASDRMESDS 144
Score = 47 (21.6 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 18/78 (23%), Positives = 33/78 (42%)
Query: 153 SQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAKATPVLTTYSSRKR 212
S S+S++ ++ + P GR+ PA++PLP+ P P ++ S
Sbjct: 253 SASSSSSSSSSSDSDVSVKKPPRGRK----PAEKPLPK-PRGRKPKPERPPSSSSSDSDS 307
Query: 213 SGGSRLQSTQRMAPSTRR 230
R+ +R + RR
Sbjct: 308 DEVDRISEWKRRDEARRR 325
Score = 44 (20.5 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 738 INARCEAVEEIKQNEKQKEMSSVSISDDHLGDKGVASVLFSSSPAEGVDSPAR-VSPPNT 796
+ + EAV+++ + +KE + ++ + L + +A AE D P+ +S P
Sbjct: 551 LGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEELAGEEAPQEKAE--DKPSTDLSAPVN 608
Query: 797 SLCHVSTSESA 807
ESA
Sbjct: 609 GEATSQKGESA 619
>UNIPROTKB|Q7Z4V5 [details] [associations]
symbol:HDGFRP2 "Hepatoma-derived growth factor-related
protein 2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR017923
Pfam:PF00855 GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
EMBL:CH471139 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
Gene3D:1.20.930.10 EMBL:AF294267 EMBL:AY358600 EMBL:BC000755
EMBL:BC009449 IPI:IPI00013290 IPI:IPI01018333 RefSeq:NP_001001520.1
RefSeq:NP_116020.1 UniGene:Hs.43071 PDB:3EAE PDB:3QBY PDB:3QJ6
PDBsum:3EAE PDBsum:3QBY PDBsum:3QJ6 ProteinModelPortal:Q7Z4V5
SMR:Q7Z4V5 IntAct:Q7Z4V5 PhosphoSite:Q7Z4V5 DMDM:74738715
PaxDb:Q7Z4V5 PeptideAtlas:Q7Z4V5 PRIDE:Q7Z4V5 GeneID:84717
KEGG:hsa:84717 UCSC:uc002mao.3 UCSC:uc002map.3 CTD:84717
GeneCards:GC19P004472 neXtProt:NX_Q7Z4V5 eggNOG:NOG80217
HOGENOM:HOG000230488 HOVERGEN:HBG099722 InParanoid:Q7Z4V5
ChiTaRS:HDGFRP2 EvolutionaryTrace:Q7Z4V5 GenomeRNAi:84717
NextBio:74813 PMAP-CutDB:Q7Z4V5 ArrayExpress:Q7Z4V5 Bgee:Q7Z4V5
Genevestigator:Q7Z4V5 InterPro:IPR021567 Pfam:PF11467
Uniprot:Q7Z4V5
Length = 671
Score = 130 (50.8 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 44/144 (30%), Positives = 64/144 (44%)
Query: 22 WKVGDLVLAKVKGFPAWPATVSEPEKWGYSADWKKVLVFFFGTQQIAFCNPADVEAFTEE 81
+K GDLV AK+KG+P WPA + + K +FFFGT + AF P D+ + +
Sbjct: 5 FKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYDKC 64
Query: 82 K-KQSLLTKRQGRGADFVRAVQEIIDSYEKLKKQDQVDSNSGDELTVANGGNSVNSISHL 140
K K KR+G F + EI ++ S+S E AN + ++
Sbjct: 65 KDKYGKPNKRKG----FNEGLWEIQNNPHASYSAPPPVSSSDSEAPEANPADGSDADEDD 120
Query: 141 KDR----TEASEATLDSQMKPSNS 160
+DR A AT S S+S
Sbjct: 121 EDRGVMAVTAVTATAASDRMESDS 144
Score = 47 (21.6 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 18/78 (23%), Positives = 33/78 (42%)
Query: 153 SQMKPSNSTAGDGLNLPTEDSPAGRQLDALPAKEPLPEQPSENLVAKATPVLTTYSSRKR 212
S S+S++ ++ + P GR+ PA++PLP+ P P ++ S
Sbjct: 253 SASSSSSSSSSSDSDVSVKKPPRGRK----PAEKPLPK-PRGRKPKPERPPSSSSSDSDS 307
Query: 213 SGGSRLQSTQRMAPSTRR 230
R+ +R + RR
Sbjct: 308 DEVDRISEWKRRDEARRR 325
Score = 41 (19.5 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 8/51 (15%), Positives = 23/51 (45%)
Query: 738 INARCEAVEEIKQNEKQKEMSSVSISDDHLGDKGVASVLFSSSPAEGVDSP 788
+ + EAV+++ + +KE + ++ + L + P+ + +P
Sbjct: 551 LGPKIEAVQKVNKAGMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAP 601
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1380 1257 0.00080 124 3 11 23 0.48 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 628 (67 KB)
Total size of DFA: 554 KB (2251 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 139.26u 0.17s 139.43t Elapsed: 00:00:07
Total cpu time: 139.27u 0.17s 139.44t Elapsed: 00:00:07
Start: Mon May 20 17:14:22 2013 End: Mon May 20 17:14:29 2013