BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000640
(1378 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 62/252 (24%)
Query: 1 MEKKRKCDEARIAREVE-------ANEIRIQKE----LERQDNLRRKNEERMRKEMEKH- 48
+ K +K ++AR+A+E + A E R QKE +++Q+ ++R + RM KE+
Sbjct: 904 LRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKRIQQIRMEKELRAQQ 963
Query: 49 -------------------------ERERRKEEERLMRERQREEERSLREQKREMERREK 83
E+E R+++ L++ ++RE R + ME R+K
Sbjct: 964 ILEAKKKKKEEAANAKLLEAEKRIKEKEMRRQQAVLLKHQERERRRQHMMLMKAMEARKK 1023
Query: 84 FLQKEYLRAEKR---RLKEELRMEKQAAKRKVAIEKATARKMAKESMDLIEDEQLELMDL 140
+KE L+ EKR RL +E ++E +R++ +E A K E M L + + L
Sbjct: 1024 AEEKERLKQEKRDEKRLNKERKLE----QRRLELEMAKELKKPNEDMCLADQKPLP---- 1075
Query: 141 AAASKGLSSIIHLDLETLQNLDSFRDSLSVFPPKTVRLKRPFSVQPWSDSEENVGNLLMV 200
L I L L +F D L V V+ R F D +V NL ++
Sbjct: 1076 -----ELPRIPGLVLSG----STFSDCLMV-----VQFLRNFGKVLGFDVNIDVPNLSVL 1121
Query: 201 WRFFITFADVLG 212
+ D +G
Sbjct: 1122 QEGLLNIGDSMG 1133
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 65/103 (63%), Gaps = 16/103 (15%)
Query: 24 QKELERQDNLRRKNEERMRKE----MEKHERERRKEEERLMRER----------QREEER 69
Q+ L++++ L+R+ +ER+ +E ++K E +R+E+ERL +E Q+EEE
Sbjct: 2744 QERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEEL 2803
Query: 70 SLREQKR-EMERREKFLQKEYL-RAEKRRLKEELRMEKQAAKR 110
+EQ+R E E++E+ ++E L R E+ RL++E +++Q +R
Sbjct: 2804 KRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQER 2846
Score = 40.4 bits (93), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 78/129 (60%), Gaps = 23/129 (17%)
Query: 24 QKELERQDNLRRKNEERMRKE----MEKHERE------RRKEEERLMRERQR--EEERSL 71
Q++L++++ L+R+ +ER++KE ++ ER +R+E+ERL RE+Q ++E L
Sbjct: 2766 QEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEEL 2825
Query: 72 REQKREMERREKFLQKEYLRAEKRRLKEELRMEKQAAKR----KVAI---EKATARKMAK 124
+ Q++E ++E+ L+ R E+ RL++E +++Q +R K+ + E+ K+
Sbjct: 2826 KRQEQERLQKEEALK----RQEQERLQKEEELKRQEQERLERKKIELAEREQHIKSKLES 2881
Query: 125 ESMDLIEDE 133
+ + +I+DE
Sbjct: 2882 DMVKIIKDE 2890
>sp|B2ZX90|FAS1_ORYSJ Chromatin assembly factor 1 subunit FSM OS=Oryza sativa subsp.
japonica GN=FSM PE=2 SV=1
Length = 940
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 70/110 (63%), Gaps = 7/110 (6%)
Query: 26 ELERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQREEERSLREQKR------EME 79
+L++ + K+ ++ +K++EK +++ KEE R+ +++++++E +LREQKR EM+
Sbjct: 322 QLQKNTSTNEKDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRREKEEAEMK 381
Query: 80 RREKFLQKEYLRAEKRRLKEELRMEKQAAKRKVAIEKATARKMAKESMDL 129
++++ ++E + +KRR KEE KQ K++ EK R+ KE++ L
Sbjct: 382 KQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAEKEQKRR-EKEAVQL 430
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 74/120 (61%), Gaps = 11/120 (9%)
Query: 8 DEARIAREVEANEI---RIQKELERQDNLRRKNEERMRKEMEKH------ERERRKEEER 58
D++++ + NE + QK++E++ + K E RMRK+ +K E++RR++EE
Sbjct: 319 DDSQLQKNTSTNEKDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRREKEEA 378
Query: 59 LMRERQREEERSLREQKREMERREKFLQKEYLRAEKRRLKEELRMEKQAA--KRKVAIEK 116
M+++QR++E +++++ E+ E +K+ + ++ KE+ R EK+A K+++AI+K
Sbjct: 379 EMKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAEKEQKRREKEAVQLKKQLAIQK 438
Score = 35.4 bits (80), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 52/88 (59%), Gaps = 13/88 (14%)
Query: 21 IRIQKELERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQREEERSLREQKREMER 80
+R QK E+++ +K + + +E +K ++ R KEE +++++++E + +EQK R
Sbjct: 367 LREQKRREKEEAEMKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAEKEQK----R 422
Query: 81 REKFLQKEYLRAEKRRLKEELRMEKQAA 108
REK E +LK++L ++KQA+
Sbjct: 423 REK---------EAVQLKKQLAIQKQAS 441
>sp|Q20497|MED12_CAEEL Mediator of RNA polymerase II transcription subunit 12
OS=Caenorhabditis elegans GN=dpy-22 PE=1 SV=2
Length = 3498
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 28 ERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQR--------EEERSLREQKREME 79
+R + LRR+ EER+RKE E+ R +R+ EER+ +E+ R ++E+E
Sbjct: 2624 QRLELLRRQEEERLRKEAEERMRIQRENEERVRQEQMRLEAEERERIRRAEEERIQKELE 2683
Query: 80 RREKFLQKEYLRAEKRRLKEELRM 103
+ + ++E R EK R ++E RM
Sbjct: 2684 DKVRREKEEAARQEKERQEQEARM 2707
>sp|Q9Z0R6|ITSN2_MOUSE Intersectin-2 OS=Mus musculus GN=Itsn2 PE=1 SV=2
Length = 1659
Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 25 KELERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQREEERSLREQKREMERREKF 84
+E E Q L E++ + E+ E K + LM ++QRE ER +++K E ER+++
Sbjct: 352 QEEEPQKKLPVTFEDKRKANYERGNMELEKRRQVLMEQQQREAERKAQKEKEEWERKQRE 411
Query: 85 LQKEYLRAEKRRLKEELRMEKQ 106
LQ++ K++L+ E R+EKQ
Sbjct: 412 LQEQEW---KKQLELEKRLEKQ 430
>sp|Q9NZM3|ITSN2_HUMAN Intersectin-2 OS=Homo sapiens GN=ITSN2 PE=1 SV=3
Length = 1697
Score = 37.7 bits (86), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 1 MEKKRKCDEARIAREVEANEIRIQKELERQDNLRRKNEERMRKEMEKHERERRKEEERLM 60
M+KK+ DEA AR+ + + + KE NLR++ EE+ ++ E+ +E+ +EEER
Sbjct: 683 MQKKKLEDEA--ARKAKQGKENLWKE-----NLRKEEEEKQKRLQEEKTQEKIQEEERKA 735
Query: 61 RERQREEERSLR--EQKRE 77
E+QR+++ +L+ E+KRE
Sbjct: 736 EEKQRKDKDTLKAEEKKRE 754
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 25 KELERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQREEERSLREQKREMERREKF 84
+E E Q L E++ + E+ E K + LM ++QRE ER +++K E ER+++
Sbjct: 351 QEEEPQKKLPVTFEDKRKANYERGNMELEKRRQALMEQQQREAERKAQKEKEEWERKQRE 410
Query: 85 LQKEYLRAEKRRLKEELRMEK 105
LQ++ K++L+ E R+EK
Sbjct: 411 LQEQEW---KKQLELEKRLEK 428
>sp|Q75CK5|NST1_ASHGO Stress response protein NST1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NST1 PE=3
SV=2
Length = 1207
Score = 37.4 bits (85), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 66/109 (60%), Gaps = 20/109 (18%)
Query: 2 EKKRKC--DEARIAREVEANEIRIQKELERQDNLRRKNEERMRK---EMEKH-----ERE 51
E+KRK +EAR+ +E EA +E++R++N R+K EE RK EM K RE
Sbjct: 616 EEKRKQVEEEARLKQEAEA------REMQRRENQRKKVEEAKRKKDLEMRKRLEEQRRRE 669
Query: 52 RRKEEERLMRE---RQREEERSLREQKREMERREKFLQK-EYLRAEKRR 96
+E +R M+E R+R++ER RE+++ ++EK L+K + L +K+R
Sbjct: 670 EEQERQRRMKEEIKRKRDQERKQREEEQRKRKQEKELKKLQSLEVKKKR 718
>sp|P46504|YLX8_CAEEL Uncharacterized protein F23F12.8 OS=Caenorhabditis elegans
GN=F23F12.8 PE=4 SV=2
Length = 980
Score = 36.6 bits (83), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 28/132 (21%)
Query: 2 EKKRKCDEARIAREVEANEIRIQKELERQDNL----------RRKNEERMRKEMEKHERE 51
EK+ K E R++E +E Q EL+RQ + R + ER+R E +K E E
Sbjct: 328 EKEEKARELERRRKLEESETARQAELDRQATIYAEQERMAMERNRELERIRLEEKKRENE 387
Query: 52 RRKEE------------ERLMRERQREEER------SLREQKREMERREKFLQKEYLRAE 93
R ++E ERL ERQR+ ER + R+ K + E R++ +Q++ + E
Sbjct: 388 RVRQEEIAMEISKIRELERLQLERQRKNERVRQELEAARKYKLQEEERQRKIQQQKVEME 447
Query: 94 KRRLKEELRMEK 105
+ R +EE R E+
Sbjct: 448 QIRQQEEARQEQ 459
Score = 34.3 bits (77), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 14/96 (14%)
Query: 2 EKKRKCDEARIAREVEANEIRIQKELERQDNLRRKNEERMRKEMEKHERERRKEEERLMR 61
EKKR + R+ +E A EI +ELER R++ ER+R+E+E + + +EEER
Sbjct: 381 EKKR--ENERVRQEEIAMEISKIRELERLQLERQRKNERVRQELEAARKYKLQEEER--- 435
Query: 62 ERQREEERSLREQKREMERREKFLQKEYLRAEKRRL 97
+R +++QK EME + Q+E R E+ R+
Sbjct: 436 ------QRKIQQQKVEME---QIRQQEEARQEQLRV 462
>sp|Q8C1B1|CAMP2_MOUSE Calmodulin-regulated spectrin-associated protein 2 OS=Mus musculus
GN=Camsap2 PE=1 SV=3
Length = 1461
Score = 35.8 bits (81), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 19 NEIRIQKELERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQREEERSLREQKREM 78
N++ +++ + LRR+ E ++RK+ + E E +KE + + QK+E
Sbjct: 1145 NDMAMKRAALLEKRLRREKETQLRKQQLEAEMEHKKE--------ETRRKTEEERQKKED 1196
Query: 79 ER-REKFLQKEYLRAEKRRLKEEL----RMEKQAAKRKVAIEKATARKMAKESMDLIEDE 133
ER R +F+++EY+R ++ +L E++ + QAAK+K K+ R + I+
Sbjct: 1197 ERARREFIRQEYMRRKQLKLMEDMDTVIKPRPQAAKQKKQRPKSIHRDHIESPKTPIKGP 1256
Query: 134 QLELMDLAAASKGLSSIIH 152
+ + LA+ + G S +H
Sbjct: 1257 PVSSLSLASLNTGDSESVH 1275
>sp|Q54Y06|Y8487_DICDI Probable cyclin-dependent serine/threonine-protein kinase
DDB_G0278487 OS=Dictyostelium discoideum GN=DDB_G0278487
PE=2 SV=1
Length = 636
Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 39/57 (68%)
Query: 24 QKELERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQREEERSLREQKREMER 80
Q+ L+RQ L+++ +E+ ++E+ K ++E+ + ++ E+QR+E+ LR ++E ER
Sbjct: 415 QRLLKRQQELKKQQDEQRQQELIKKQQEQEQLRLKVEHEKQRQEQERLRLIQQEQER 471
>sp|Q95XZ5|NPBL_CAEEL Nipped-B-like protein pqn-85 OS=Caenorhabditis elegans GN=pqn-85
PE=3 SV=2
Length = 2203
Score = 35.4 bits (80), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 39 ERMRKEMEKHERERRKEEERLMRERQREEERSLREQKREMERREKFLQKEYLRAEKRRLK 98
E RK E+ +R R EE+RL+ E+QR E+ RE+ E++R E+ + E ++RR+
Sbjct: 212 EEQRKRNEELKRLRIAEEKRLLEEQQRLREQMERERLAEIKRLEEAARLE----DERRIA 267
Query: 99 EELRMEKQAAKRKVAIEK 116
++ +KQA +K+ E+
Sbjct: 268 ADIEAQKQAMLQKMQAEQ 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 510,903,202
Number of Sequences: 539616
Number of extensions: 22785501
Number of successful extensions: 148283
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 2605
Number of HSP's that attempted gapping in prelim test: 89862
Number of HSP's gapped (non-prelim): 28964
length of query: 1378
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1248
effective length of database: 121,419,379
effective search space: 151531384992
effective search space used: 151531384992
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)