BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 000642
         (1377 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8RXS6|INO80_ARATH DNA helicase INO80 OS=Arabidopsis thaliana GN=INO80 PE=2 SV=2
          Length = 1507

 Score = 2097 bits (5434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1018/1363 (74%), Positives = 1162/1363 (85%), Gaps = 26/1363 (1%)

Query: 1    METTSDWLNDISPRRPTNYHETEFTPKVMYEPAYLDIGEGITYRIPLSYDKLAPSLNLPS 60
            M+ + ++  D++P R  +YH+ + TPK+ YEP+YLDIG+G+ Y+IP SYDKL  SLNLPS
Sbjct: 150  MDNSPNFAADVTPHRRGSYHDRDITPKIAYEPSYLDIGDGVIYKIPPSYDKLVASLNLPS 209

Query: 61   FSDIQVEEFYLKGTLDLGSLAAMMANDKRFGPRSRVGMGEPRPQYESLQARLKALVASNS 120
            FSDI VEEFYLKGTLDL SLA +MA+DKR G RSR GMGEPRPQYESLQAR+KAL  SNS
Sbjct: 210  FSDIHVEEFYLKGTLDLRSLAELMASDKRSGVRSRNGMGEPRPQYESLQARMKALSPSNS 269

Query: 121  PQKFSLKVSDTG-NSSIPEGAAGSIQRSILSEGGILQVYYVKVLEKGETYEIIERALPKK 179
               FSLKVS+   NS+IPEG+AGS  R+ILSEGG+LQV+YVK+LEKG+TYEI++R+LPKK
Sbjct: 270  TPNFSLKVSEAAMNSAIPEGSAGSTARTILSEGGVLQVHYVKILEKGDTYEIVKRSLPKK 329

Query: 180  VKVKKDPSVIEKEEMEKIGKVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVK 239
            +K K DP+VIEK E +KI K W+NIVR+DI K+H+ F TFH+K  IDAKRFA+ CQREV+
Sbjct: 330  LKAKNDPAVIEKTERDKIRKAWINIVRRDIAKHHRIFTTFHRKLSIDAKRFADGCQREVR 389

Query: 240  MKVSRSLKLMRGAAIRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAK 299
            MKV RS K+ R A IRTRK++RDMLLFWKR DK+MAE RK++E+EAAEA KREQE RE+K
Sbjct: 390  MKVGRSYKIPRTAPIRTRKISRDMLLFWKRYDKQMAEERKKQEKEAAEAFKREQEQRESK 449

Query: 300  RQQQRLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDPE 359
            RQQQRLNFLI+QTELYSHFMQNK+ S PSE LP+G++ P D E+L  +S  EP E EDPE
Sbjct: 450  RQQQRLNFLIKQTELYSHFMQNKTDSNPSEALPIGDENPID-EVLPETSAAEPSEVEDPE 508

Query: 360  EAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPS 419
            EAELK++ L+AAQ+AVSKQK +T+ FDTE  KLR+ ++ E  + D+SV+GS NIDLHNPS
Sbjct: 509  EAELKEKVLRAAQDAVSKQKQITDAFDTEYMKLRQTSEMEGPLNDISVSGSSNIDLHNPS 568

Query: 420  TMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHL 479
            TMPVTSTVQTPELFKG+LKEYQ+KGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHL
Sbjct: 569  TMPVTSTVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHL 628

Query: 480  AEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRR 539
            AEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQER +LRKNINPKR+YRR
Sbjct: 629  AEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRR 688

Query: 540  DAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLT 599
            DAGFHILITSYQLLV DEKYFRRVKWQYMVLDEAQAIKSS+SIRWKTLLSFNCRNRLLLT
Sbjct: 689  DAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLT 748

Query: 600  GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILK 659
            GTPIQNNMAELWALLHFIMP LFD+H+QFNEWFSKGIE+HAEHGGTLNEHQLNRLHAILK
Sbjct: 749  GTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILK 808

Query: 660  PFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKI 719
            PFMLRRVKKDV+SELTTKTEV VHCKLSSRQQAFYQAIKNKISLA LFD++RG   +KK+
Sbjct: 809  PFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKV 868

Query: 720  LNLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEY 779
            LNLMNIVIQLRKVCNHPELFERNEGSSYLYFG   NSLLP PFGELED+ +SG +NPI Y
Sbjct: 869  LNLMNIVIQLRKVCNHPELFERNEGSSYLYFGVTSNSLLPHPFGELEDVHYSGGQNPIIY 928

Query: 780  KIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKS 839
            KIPK++HQE+LQ+SE  CS+VG GISRE F K FNI+S E + +SIF   SG D     S
Sbjct: 929  KIPKLLHQEVLQNSETFCSSVGRGISRESFLKHFNIYSPEYILKSIFPSDSGVDQVVSGS 988

Query: 840  ETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEAMDGELNENHP 899
              FGF+ LMDLSP+EV +LA  S  ERLLF++LRW+RQFLD +++  ME+ DG+L++N+ 
Sbjct: 989  GAFGFSRLMDLSPSEVGYLALCSVAERLLFSILRWERQFLDELVNSLMESKDGDLSDNNI 1048

Query: 900  DRGKVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKLLNATYTF 959
            +R K +AVTR+LL+PS+ ETN  +R+ + GP     E LV+SHQ+R LS+IKLL++ YT+
Sbjct: 1049 ERVKTKAVTRMLLMPSKVETNFQKRRLSTGPTRPSFEALVISHQDRFLSSIKLLHSAYTY 1108

Query: 960  IPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGG-PHQLIQE 1018
            IP+A+APP+++ CSDRN  YR+TEE H PWLKRLLIGFARTSE  GPRKP   PH LIQE
Sbjct: 1109 IPKARAPPVSIHCSDRNSAYRVTEELHQPWLKRLLIGFARTSEANGPRKPNSFPHPLIQE 1168

Query: 1019 IDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLF 1078
            IDSELPV +PALQLT++IFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRA NHRVLLF
Sbjct: 1169 IDSELPVVQPALQLTHRIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLF 1228

Query: 1079 AQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGI 1138
            AQMTKMLNILEDYMNYRKY+YLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGI
Sbjct: 1229 AQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGI 1288

Query: 1139 NLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNT 1198
            NLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKIL RASQKNT
Sbjct: 1289 NLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNT 1348

Query: 1199 VQQLVMTGGHVQG-DILAPEDVVSLLLDD---AQLEQKLRELPVQVKDKPKRKQPTKAIR 1254
            VQQLVMTGGHVQG D L   DVVSLL+DD   AQLEQK RELP+QVKD+ K+K  TK IR
Sbjct: 1349 VQQLVMTGGHVQGDDFLGAADVVSLLMDDAEAAQLEQKFRELPLQVKDRQKKK--TKRIR 1406

Query: 1255 LDAEGDASLEDLTNVEAQVPGQEPSPDLEKASSSNKKRKAASGKQTTPKARSTQKTNEPA 1314
            +DAEGDA+LE+L +V+ Q  GQEP  + EK  SSNKKR+AAS     PKAR+ QK  E A
Sbjct: 1407 IDAEGDATLEELEDVDRQDNGQEPLEEPEKPKSSNKKRRAAS----NPKARAPQKAKEEA 1462

Query: 1315 STVMDYELDDPLQAADPQSQRPKRVKRPKKSINENLEPAFTAT 1357
            +              +   QR KRVKR  KSINE+LEP F+A+
Sbjct: 1463 N-------------GEDTPQRTKRVKRQTKSINESLEPVFSAS 1492


>sp|Q6ZPV2|INO80_MOUSE DNA helicase INO80 OS=Mus musculus GN=Ino80 PE=2 SV=2
          Length = 1559

 Score =  854 bits (2206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/1079 (45%), Positives = 666/1079 (61%), Gaps = 97/1079 (8%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            KVW++IV+K++PK +K   +       ++++ A  C +EV+    ++ K  +    R R+
Sbjct: 281  KVWLSIVKKELPKANKQKSSARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARR 340

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
            L ++MLL+WK+ +K   E RKR E+EA E  K ++E+REAKRQQ++LNFLI QTELY+HF
Sbjct: 341  LTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHF 400

Query: 319  MQNK----SSSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDPEEAELKKEALKAAQNA 374
            M  K          E+L    D    +++ +         +ED +    K +ALK A+NA
Sbjct: 401  MSRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENA 460

Query: 375  VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSG-NIDLHNPSTMPVTSTVQTPELF 433
                +  T +FD +  + R AA   A   D S +G G +  L NPS +     +  P +F
Sbjct: 461  YHIHQARTRSFDEDAKESRAAALRAA---DKSGSGFGESYSLANPS-IRAGEDIPQPTIF 516

Query: 434  KGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 493
             G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++A LAHLAE +NIWGPFL+++
Sbjct: 517  NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 576

Query: 494  PASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLL 553
            PAS LNNW  E +RF P  K LPYWG   +R V+R+  + K LY +DA FH++ITSYQL+
Sbjct: 577  PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 636

Query: 554  VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
            V D KYF+RVKWQYMVLDEAQA+KSS+S+RWK LL F CRNRLLLTGTPIQN MAELWAL
Sbjct: 637  VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 696

Query: 614  LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
            LHFIMPTLFDSHE+FNEWFSK IESHAE+   ++E+QL+RLH ILKPFMLRR+KKDV +E
Sbjct: 697  LHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENE 756

Query: 674  LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK--ILNLMNIVIQLRK 731
            L+ K E++ +C+L+SRQ+  YQA+KNKIS+  L  +S G   + +    +LMN+V+Q RK
Sbjct: 757  LSDKIEILTYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRK 816

Query: 732  VCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIVHQEILQ 791
            VCNHPELFER E  S  +      SL P                   Y+I K +++    
Sbjct: 817  VCNHPELFERQETWSPFHI-----SLKP-------------------YEISKFIYR---- 848

Query: 792  SSEILCSAVGHGISRELFQKR-------FNIFSAENVYQSIFSLASGSDASPVKSETFGF 844
                      HG  R     R        + F+ + + QS+F     ++ S      F F
Sbjct: 849  ----------HGQIRVFNHSRDRWLKVLLSPFAPDYIQQSLFHRKGINEGS-----CFSF 893

Query: 845  THLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEAMDGELNENH-PDRGK 903
               +D+SPAE+A L     + R L   L     +    L  + E  DG  ++++  ++  
Sbjct: 894  LRFIDVSPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWAEP-DGTSHQSYLRNKDF 952

Query: 904  VRAVTRLLLIPSRSETNLLR-----RKFTIGPGYDPCEDLVVSHQERLLSNIK--LLNAT 956
            +  V   L  P+     LL+            GY    D VV  +    S+++  LL   
Sbjct: 953  LLGVDFPLSFPNLCSCPLLKSLVFSSHCKAVSGY---SDHVVHQRRSATSSLRCCLLTEL 1009

Query: 957  YTFI----PQAQAPPINVQCSDRNFTYR---MTEEQHDPWLKRLLIGFARTSENIGPRKP 1009
             +F+    P+  A P++  C+DR+  Y    + E       + LL G    + +   R+ 
Sbjct: 1010 PSFLCVASPRVTAVPLDSYCNDRSAEYERGVLKEGGSLAAKQCLLNGAPELATDWLSRRS 1069

Query: 1010 GGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLR 1069
                Q   E    L   +P    +   F   P  +S     L+TDSGKL  LD+LL RL+
Sbjct: 1070 ----QFFPEPAGGLLSIRPQNGWS---FIRIPGKES-----LITDSGKLYALDVLLTRLK 1117

Query: 1070 AENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLL 1129
            ++ HRVL+++QMT+M+++LE+YM YRK+ Y+RLDGSS I +RRDMV DFQ R+DIFVFLL
Sbjct: 1118 SQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQTRNDIFVFLL 1177

Query: 1130 STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI 1189
            STRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLGQTK VTVYRLICK T+EE+I
Sbjct: 1178 STRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERI 1237

Query: 1190 LQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLDDAQLEQKLRELPVQVKDKPKRKQ 1248
            LQRA +K+ +Q++V++GG+ + D L P++VVSLLLDD +LE+KLR     ++ + KR+Q
Sbjct: 1238 LQRAKEKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDEELEKKLR-----LRQEEKRQQ 1291


>sp|Q9ULG1|INO80_HUMAN DNA helicase INO80 OS=Homo sapiens GN=INO80 PE=1 SV=2
          Length = 1556

 Score =  852 bits (2200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/1074 (45%), Positives = 672/1074 (62%), Gaps = 88/1074 (8%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            KVW++IV+K++PK +K   +       ++++ A  C +EV+    ++ K  +    R R+
Sbjct: 279  KVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARR 338

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
            L ++MLL+WK+ +K   E RKR E+EA E  K ++E+REAKRQQ++LNFLI QTELY+HF
Sbjct: 339  LTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHF 398

Query: 319  MQNK----SSSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDPEEAELKKEALKAAQNA 374
            M  K          E+L    D    +++ +         +ED +    K +ALK A+NA
Sbjct: 399  MSRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENA 458

Query: 375  VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSG-NIDLHNPSTMPVTSTVQTPELF 433
                +  T +FD +  + R AA   A   + S  G G +  L NPS +     +  P +F
Sbjct: 459  YHIHQARTRSFDEDAKESRAAALRAA---NKSGTGFGESYSLANPS-IRAGEDIPQPTIF 514

Query: 434  KGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 493
             G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++A LAHLAE +NIWGPFL+++
Sbjct: 515  NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 574

Query: 494  PASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLL 553
            PAS LNNW  E +RF P  K LPYWG   +R V+R+  + K LY +DA FH++ITSYQL+
Sbjct: 575  PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 634

Query: 554  VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
            V D KYF+RVKWQYMVLDEAQA+KSS+S+RWK LL F CRNRLLLTGTPIQN MAELWAL
Sbjct: 635  VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 694

Query: 614  LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
            LHFIMPTLFDSHE+FNEWFSK IESHAE+   ++E+QL+RLH ILKPFMLRR+KKDV +E
Sbjct: 695  LHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENE 754

Query: 674  LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK--ILNLMNIVIQLRK 731
            L+ K E++++C+L+SRQ+  YQA+KNKIS+  L  +S G   + +    +LMN+V+Q RK
Sbjct: 755  LSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRK 814

Query: 732  VCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIV--HQEI 789
            VCNHPELFER E  S  +      SL P                   Y I K +  H +I
Sbjct: 815  VCNHPELFERQETWSPFHI-----SLKP-------------------YHISKFIYRHGQI 850

Query: 790  LQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKSETFGFTHLMD 849
                        H  SR+ + +  + F+ + + +S+F     ++ S      F F   +D
Sbjct: 851  --------RVFNH--SRDRWLRVLSPFAPDYIQRSLFHRKGINEES-----CFSFLRFID 895

Query: 850  LSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEAMDGELNENH-PDRGKVRAVT 908
            +SPAE+A L     + R L   L     +    L  +  A +GE ++ +  ++  +  V 
Sbjct: 896  ISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSW-GAPEGESHQRYLRNKDFLLGVN 954

Query: 909  RLLLIPSRSETNLLR-----RKFTIGPGYDPCEDLVVSHQERLLSNIK--LLNATYTFI- 960
              L  P+     LL+            GY    D VV  +    S+++  LL    +F+ 
Sbjct: 955  FPLSFPNLCSCPLLKSLVFSSHCKAVSGYS---DQVVHQRRSATSSLRRCLLTELPSFLC 1011

Query: 961  ---PQAQAPPINVQCSDRNFTY--RMTEEQHDPWLKRLLI-GFARTSENIGPRKPGGPHQ 1014
               P+  A P++  C+DR+  Y  R+ +E      K+ L+ G    + +   R+     Q
Sbjct: 1012 VASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRS----Q 1067

Query: 1015 LIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHR 1074
               E    L   +P    +   F   P  +S     L+TDSGKL  LD+LL RL+++ HR
Sbjct: 1068 FFPEPAGGLWSIRPQNGWS---FIRIPGKES-----LITDSGKLYALDVLLTRLKSQGHR 1119

Query: 1075 VLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAG 1134
            VL+++QMT+M+++LE+YM YRK+ Y+RLDGSS I +RRDMV DFQ+R+DIFVFLLSTRAG
Sbjct: 1120 VLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAG 1179

Query: 1135 GLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRAS 1194
            GLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLGQTK VTVYRLICK T+EE+ILQRA 
Sbjct: 1180 GLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAK 1239

Query: 1195 QKNTVQQLVMTGGHVQGDILAPEDVVSLLLDDAQLEQKLRELPVQVKDKPKRKQ 1248
            +K+ +Q++V++GG+ + D L P++VVSLLLDD +LE+KLR     ++ + KR+Q
Sbjct: 1240 EKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDEELEKKLR-----LRQEEKRQQ 1288


>sp|Q1DUF9|INO80_COCIM Putative DNA helicase INO80 OS=Coccidioides immitis (strain RS)
            GN=INO80 PE=3 SV=1
          Length = 1662

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/1111 (41%), Positives = 642/1111 (57%), Gaps = 126/1111 (11%)

Query: 179  KVKVKKDPSVIEKEEMEKIG------KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAE 232
            K    K+PS +     +  G      ++W +I RKDIPK ++        +Q + ++ A+
Sbjct: 531  KAARSKEPSPVPATPYDSKGYNQFYEQLWRDIARKDIPKVYRIKVVSLSTRQENLRKTAQ 590

Query: 233  TCQREVKMKVSRSLKLMRGAAIRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALKRE 292
               ++ +    ++ + M+    R ++  R+M+ FW+R ++E  ++R+  +R+  E  K+ 
Sbjct: 591  LAAKQARKWQEKTNRSMKDTQARAKRTMREMMTFWRRNEREERDMRRLAQRQELELAKKA 650

Query: 293  QELREAKRQQQRLNFLIQQTELYSHFMQNK----------SSSQPSEVLPVGNDKPNDQE 342
            +  REA RQ+++LNFLI QTELYSHF+  K           ++  + +   G  K  D  
Sbjct: 651  EADREANRQRRKLNFLISQTELYSHFIGRKIKTDKAQDSGDATTTAAIEGNGEGKVPDSL 710

Query: 343  LLLSS-----SEFEPGEEEDPEEAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAAD 397
            + L       + F+  + +  +E  L++ A+  AQ+AV + +     F+ E +K+   AD
Sbjct: 711  VPLPDGGAKVTSFDDLDFDAEDETALRQAAMANAQSAVQEAQDRARAFNGEENKM---AD 767

Query: 398  TEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLN 457
             +           G ++  NP+++      Q P++    LKEYQLKGL WLVN YEQG+N
Sbjct: 768  FD----------EGEMNFQNPTSLGDVEVSQ-PKMLTCQLKEYQLKGLNWLVNLYEQGIN 816

Query: 458  GILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPY 517
            GILADEMGLGKT+Q+++ +A+LAE  +IWGPFLVVAP+S L+NW  EI +F PDLK LPY
Sbjct: 817  GILADEMGLGKTVQSISVMAYLAEVHDIWGPFLVVAPSSTLHNWQQEIVKFVPDLKVLPY 876

Query: 518  WGGLQERMVLRKNINPKRL-YRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAI 576
            WG  ++R VLRK  + + + YR+ + FH+L+TSYQL+V D +YF+++KWQYM+LDEAQAI
Sbjct: 877  WGSAKDRKVLRKFWDRRNITYRKQSEFHVLVTSYQLVVGDAQYFQKIKWQYMILDEAQAI 936

Query: 577  KSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGI 636
            KSS S RWK+LL  +CRNRLLLTGTPIQNNM ELWALLHFIMPTLFDSH++F+EWFSK I
Sbjct: 937  KSSQSSRWKSLLGMHCRNRLLLTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDI 996

Query: 637  ESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQA 696
            ESHA+    LNE QL RLH ILKPFMLRR+KK V  EL  K E  V C L+ RQ+A+Y +
Sbjct: 997  ESHAQSNTKLNEDQLKRLHMILKPFMLRRIKKHVQKELGDKVEKDVFCDLTYRQRAYYTS 1056

Query: 697  IKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS---SYLYFGEI 753
            ++N++S+  L + +    ++     LMN+V+Q RKVCNHP+LFER E +   S  YF E 
Sbjct: 1057 LRNRVSIMDLIEKA-AIGDDTDSTTLMNLVMQFRKVCNHPDLFERAETTSPFSVCYFAET 1115

Query: 754  PNSLLPPPFGELEDISFSGVRNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRF 813
             + +   PF    D+ +S  RN +EY +P+     +L S E      G G ++  F+ R+
Sbjct: 1116 ASFVREGPF---VDVGYS-TRNLVEYDLPR-----LLCSPEGRLDVAGPGNNKAGFEGRY 1166

Query: 814  -----NIFSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLL 868
                 NI++ EN+ +S+    S +DA       F +    D S  E   ++     ER  
Sbjct: 1167 LSHLMNIWTPENIRESM----SHNDA-------FSWLRFADTSVGEAYEVSHKGVFER-- 1213

Query: 869  FAMLRWDRQFLDGILDVFMEAMDG-ELNENHPDRGKVRAVTRLLLIPSRSETNLLRRKFT 927
             A+ R D      +LDV  +A DG  +N  H        V  L  I  R++   L     
Sbjct: 1214 -AVRRRDYSTRLSLLDVAYDAEDGVNINSVH--------VHSLFNIVERNDRRAL----- 1259

Query: 928  IGPGYDPCEDLVVSHQERLLSNIKLLNATYTFI--------PQAQAPPINVQCSDRNFTY 979
                     D+  +   R L N+    A    I        P A APPI + CS +    
Sbjct: 1260 --------ADITATGYMRELLNVASNVAERGGIRTIEPCAKPGASAPPITISCSGQAAIA 1311

Query: 980  RMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFG- 1038
                   +  ++  L           P K      L  ++D      +P L     + G 
Sbjct: 1312 EARATFFNTAVRHALFA--------APTKAMEEEILSNKLDPAPYSLRPLLPQPGSMKGR 1363

Query: 1039 ----SCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNY 1094
                + P M+ F     +TDSGKL  LD LL+ L+   HRVLL+ QMT+M++++E+Y+ Y
Sbjct: 1364 YTNITVPSMRRF-----VTDSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTY 1418

Query: 1095 RKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWN 1154
            R Y+Y RLDGS+ + DRRD V DFQ R +IFVFLLSTRAGGLGINLTAADTVIFY+SDWN
Sbjct: 1419 RNYKYCRLDGSTKLEDRRDTVSDFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWN 1478

Query: 1155 PTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQG-DI 1213
            PT+D QAMDRAHRLGQTK VTVYRLI + T+EE+I +RA QK  VQ++V++GG   G D 
Sbjct: 1479 PTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISGGAAGGVDF 1538

Query: 1214 LA------PEDVVSLLLDDAQ---LEQKLRE 1235
             A       +D+   L DD Q   LEQK +E
Sbjct: 1539 NARSRENRTKDIAMWLADDEQAEILEQKEKE 1569


>sp|Q0CA78|INO80_ASPTN Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 /
            FGSC A1156) GN=ino80 PE=3 SV=1
          Length = 1690

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/1087 (41%), Positives = 621/1087 (57%), Gaps = 128/1087 (11%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            ++W +I RKDIPK ++        +Q + ++ A+   ++ +    R+ K M+    R ++
Sbjct: 580  QIWRDIARKDIPKVYRIKVLSLSTRQENLRKTAQLASKQSRKWQERTNKSMKDTQARAKR 639

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
              R+M+ FWKR ++E  ++R+  E++  E+ K+ +  REA RQ+++LNFLI QTELYSHF
Sbjct: 640  TMREMMSFWKRNEREERDLRRLAEKQEIESAKKAEAEREANRQRRKLNFLISQTELYSHF 699

Query: 319  MQNK------------------SSSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDPEE 360
            +  K                   ++Q    +P G  K           +F+  E+E   +
Sbjct: 700  IGRKIKGAEGDESGDTAVEGANEAAQSKMDVPAGALKAGAGVTNFEDLDFD-AEDETALQ 758

Query: 361  AELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPST 420
                  A  A Q A  + +   NT D          D  AAM        G ++  NP++
Sbjct: 759  QAAMANAQNAVQQAQDRARAFNNTKD----------DPMAAM------DEGELNFQNPTS 802

Query: 421  MPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
            +      Q P +    LKEYQLKGL WLVN YEQG+NGILADEMGLGKTIQ+++ +A+LA
Sbjct: 803  LGDIEISQ-PSMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLA 861

Query: 481  EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRR 539
            E  NIWGPFLV+APAS L+NW  EI++F PD+K LPYWG  ++R +LRK  + K + Y +
Sbjct: 862  EVHNIWGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKILRKFWDRKHITYTK 921

Query: 540  DAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLT 599
            ++ FH+L+TSYQL+V D +YF++VKWQYM+LDEAQAIKSS S RWK LL F+CRNRLLLT
Sbjct: 922  ESEFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLT 981

Query: 600  GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILK 659
            GTPIQNNM ELWALLHFIMPTLFDSH++F+EWFSK IESHA+    LNE QL RLH ILK
Sbjct: 982  GTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILK 1041

Query: 660  PFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKI 719
            PFMLRRVKK V  EL  K E  V C L+ RQ+A+Y  +++++S+  L + +    +E   
Sbjct: 1042 PFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRAYYTGLRDRVSIMDLIEKA-AVGDEADS 1100

Query: 720  LNLMNIVIQLRKVCNHPELFERNEGSSYL---YFGEIPNSLLPPPFGELEDISFSGVRNP 776
              LMN+V+Q RKVCNHP+LFER E  S L   YF E  + +     G+  D+ +S  R+ 
Sbjct: 1101 TTLMNLVMQFRKVCNHPDLFERAETKSPLTTAYFAETASFVRE---GQFVDVGYS-TRSL 1156

Query: 777  IEYKIPKIVHQEILQSSEILCSAVGH-----------GISRELFQKRFNIFSAENVYQSI 825
            IEY +P+           +LCS+ G            G   +      N+F+ EN+ QSI
Sbjct: 1157 IEYPLPR-----------LLCSSAGRVDVAGPDNLHAGFRGKYLAHMMNVFAPENIKQSI 1205

Query: 826  FSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDV 885
                        +   F F   +D S  +    +     ER L    + +R  L  +  V
Sbjct: 1206 -----------QEDGAFSFLRFIDTSMGDAYEQSHRGVFERALSRRGQPNR--LSRLNVV 1252

Query: 886  FMEAMDGELNENHPDRGKVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLVVSHQER 945
            + E           D G       +L I +R++ + +     I P     E + VS    
Sbjct: 1253 YEE-----------DEGDAPLAHTMLNIVARNDQSAVHE---ITPDGYMRELMTVSQSTF 1298

Query: 946  LLSNIKLLNATYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIG 1005
                + ++    +  P A APP+ +  S       M++   +  ++  L  F+  +  + 
Sbjct: 1299 EREGLNVIEPCAS--PAASAPPVTITSSSPAAQIEMSDALFNVPVRHAL--FSTPTRQLE 1354

Query: 1006 PRKPGGPHQLIQEIDSELPVAKP-------ALQLTYQIFGSCPPMQSFDPAKLLTDSGKL 1058
                    Q++++    +P + P       +L+  Y      P M+ F     +TDSGKL
Sbjct: 1355 -------EQILEKKLDPVPYSHPPMLPKPTSLKGRYTHI-EVPSMRRF-----VTDSGKL 1401

Query: 1059 QTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDF 1118
              LD LL+ L+A  HRVLL+ QMT+M++++E+Y+ YR Y+Y RLDGS+ + DRRD V DF
Sbjct: 1402 AKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADF 1461

Query: 1119 QHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYR 1178
            Q R +IFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLGQT+ VTVYR
Sbjct: 1462 QQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYR 1521

Query: 1179 LICKETVEEKILQRASQKNTVQQLVMTGGHVQGDIL-------APEDVVSLLLDDAQ--- 1228
            LI + T+EE+I +RA QK  VQ++V+TGG   G            +D+   L DD Q   
Sbjct: 1522 LITRGTIEERIRKRALQKEEVQRVVITGGAAGGVDFNTRNRESRTKDIAMWLADDEQAEL 1581

Query: 1229 LEQKLRE 1235
            +EQK +E
Sbjct: 1582 IEQKEKE 1588


>sp|Q2UTQ9|INO80_ASPOR Putative DNA helicase ino80 OS=Aspergillus oryzae (strain ATCC 42149
            / RIB 40) GN=ino80 PE=3 SV=1
          Length = 1444

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/1077 (41%), Positives = 620/1077 (57%), Gaps = 108/1077 (10%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            ++W +I RKDIPK ++        +Q + ++ A+   ++ +    R+ K M+    R ++
Sbjct: 397  QIWRDIARKDIPKVYRIKALSLSTRQENLRKTAQLASKQSRKWQERTNKSMKDTQARAKR 456

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
              R+M+ FWKR ++E  ++R+  ER+  E+ K+ +  REA RQ+++LNFLI QTELYSHF
Sbjct: 457  TMREMMSFWKRNEREERDLRRLAERQEIESAKKAEAEREANRQRRKLNFLISQTELYSHF 516

Query: 319  MQNKSSSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDP--EEAELKKEALKAAQ-NAV 375
            +  K        +        D  +  S    +PG++E+   E+A  K    +    +A 
Sbjct: 517  IGRK--------IKGAEGDSGDTAVEGSDETVQPGKDEEHAMEDAGAKVTNFEDLDFDAE 568

Query: 376  SKQKMLTNTFDTECSKLREAADTEAAMLD----VSVAGSGNIDLHNPSTMPVTSTVQTPE 431
             +  +         + ++EA D   A  D    ++    G ++  NP+++      Q P 
Sbjct: 569  DETALRQAAMANAQNAVKEAQDRARAFNDGQDHMAALDEGELNFQNPTSLGDIEISQ-PT 627

Query: 432  LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLV 491
            +    LKEYQLKGL WLVN YEQG+NGILADEMGLGKTIQ+++ +A+LAE  NIWGPFLV
Sbjct: 628  MLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLV 687

Query: 492  VAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILITSY 550
            +APAS L+NW  EI++F PD+K LPYWG  ++R +LRK  + K + Y +++ FH+L+TSY
Sbjct: 688  IAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKILRKFWDRKHITYTKESEFHVLVTSY 747

Query: 551  QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
            QL+V D +YF++VKWQYM+LDEAQAIKSS S RWK LL F+CRNRLLLTGTPIQNNM EL
Sbjct: 748  QLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFSCRNRLLLTGTPIQNNMQEL 807

Query: 611  WALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDV 670
            WALLHFIMPTLFDSH++F+EWFSK IESHA+    LNE QL RLH ILKPFMLRRVKK V
Sbjct: 808  WALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVKKHV 867

Query: 671  ISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLR 730
              EL  K E  V C L+ RQ+A+Y  ++N++S+  L + +    +E     LMN+V+Q R
Sbjct: 868  QQELGDKVEKDVFCDLTYRQRAYYTNLRNRVSIMDLIEKA-AVGDEADSTTLMNLVMQFR 926

Query: 731  KVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIVHQEIL 790
            KVCNHP+LFER E  S         +      G+  D+ +S  RN IEY +P+     +L
Sbjct: 927  KVCNHPDLFERAETKSPFSVAHFAETASFVREGQNVDVGYS-TRNLIEYPLPR-----LL 980

Query: 791  QSSEILCSAVGHGISRELFQKRF-----NIFSAENVYQSIFSLASGSDASPVKSETFGFT 845
              S+      G G     F+ ++     NIF+ EN+  S     +  D       TF F 
Sbjct: 981  CGSDGRVDVAGPGNLHAGFRGKYLAHLMNIFAPENIKHS-----AEHDG------TFSFL 1029

Query: 846  HLMDLSPAEVAFLAKGSFMERLLFAMLRWDR-QFLDGILDVFMEAMDGEL---------- 894
              +D S  E    +     ER +    + +R   L+ + D     M   L          
Sbjct: 1030 RFVDTSINEAYEQSHQGIFERAVRRRGKPNRLSRLNVVYDDDKATMASALPHTMFNIVQR 1089

Query: 895  NENHP-----DRGKVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSN 949
            N+ H        G +R +T +      +++   R+   I    +PC    VS        
Sbjct: 1090 NDQHAINDVTTEGYMRELTTV------AQSAFERKGLGI---IEPC----VS-------- 1128

Query: 950  IKLLNATYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKP 1009
                       P A APPI V  S R     M +   +  ++  L  F+  S+ +     
Sbjct: 1129 -----------PAASAPPITVSSSSRAPLSEMNDSLFNVSVRHAL--FSTPSKQL----- 1170

Query: 1010 GGPHQLIQEIDSELPVA-KPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRL 1068
                Q++++    +P +  P L     I G    ++     + +TDSGKL  LD LL+ L
Sbjct: 1171 --EQQILEKKLDPIPYSLPPMLPQPISIKGRYTHIEVPSMRRFVTDSGKLAKLDELLREL 1228

Query: 1069 RAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFL 1128
            +A  HRVLL+ QMT+M++++E+Y+ YR Y+Y RLDGS+ + DRRD V DFQ R +IFVFL
Sbjct: 1229 KAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFL 1288

Query: 1129 LSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEK 1188
            LSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLGQT+ VTVYRLI + T+EE+
Sbjct: 1289 LSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEER 1348

Query: 1189 ILQRASQKNTVQQLVMTGGHVQGDIL-------APEDVVSLLLDDAQ---LEQKLRE 1235
            I +RA QK  VQ++V++GG   G            +D+   L DD Q   +EQK +E
Sbjct: 1349 IRKRALQKEEVQRVVISGGAAGGVDFNTRNRESRTKDIAMWLADDEQAELIEQKEKE 1405


>sp|A1C9W6|INO80_ASPCL Putative DNA helicase ino80 OS=Aspergillus clavatus (strain ATCC 1007
            / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ino80
            PE=3 SV=1
          Length = 1707

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/1081 (42%), Positives = 626/1081 (57%), Gaps = 108/1081 (9%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            ++W +I RKDIPK ++        +Q + ++ A+   ++ +    R+ K M+    R ++
Sbjct: 592  QIWRDIARKDIPKVYRIKALSLSTRQENLRKTAQLASKQSRKWQERTNKSMKDTQARAKR 651

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
              R+M+ FWKR ++E  ++R+  E++  E+ K+ +  REA RQ+++LNFLI QTELYSHF
Sbjct: 652  TMREMMSFWKRNEREERDLRRLAEKQEIESAKKAEAEREANRQRRKLNFLISQTELYSHF 711

Query: 319  MQNK----SSSQPSEVLPVGND------KPNDQELLLSSS---------EFEPGEEEDPE 359
            +  K     +    +    G+D      K  D  + L SS          FE  + +  +
Sbjct: 712  IGRKIKGAEADASGDAAVDGSDETVRPGKAGDHTIDLPSSVADLSTKVTNFEDLDFDAED 771

Query: 360  EAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPS 419
            E  L++ A+  AQNAV + +     F+ E + +        A LD      G ++  NP+
Sbjct: 772  ETALRQAAMANAQNAVKEAQDRARAFNAEENPM--------AALD-----EGELNFQNPT 818

Query: 420  TMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHL 479
            ++      Q P +    LKEYQLKGL WLVN YEQG+NGILADEMGLGKTIQ+++ +A+L
Sbjct: 819  SLGDIEISQ-PNMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYL 877

Query: 480  AEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YR 538
            AE  NIWGPFLV+APAS L+NW  EI++F PD+K LPYWG  ++R VLRK  + K + Y 
Sbjct: 878  AEVHNIWGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKVLRKFWDRKHITYT 937

Query: 539  RDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLL 598
            +++ FH+L+TSYQL+V D +YF++VKWQYM+LDEAQAIKSS S RWK LL F+CRNRLLL
Sbjct: 938  KESEFHVLVTSYQLVVLDSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFSCRNRLLL 997

Query: 599  TGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAIL 658
            TGTPIQNNM ELWALLHFIMPTLFDSH++F+EWFSK IESHA+    LNE QL RLH IL
Sbjct: 998  TGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMIL 1057

Query: 659  KPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKK 718
            KPFMLRRVKK V  EL  K E  V C L+ RQ+A+Y  ++N++S+  L + +    +E  
Sbjct: 1058 KPFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRAYYTNLRNRVSIMDLIEKA-AVGDEAD 1116

Query: 719  ILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIE 778
               LMN+V+Q RKVCNHP+LFER E  S         +      G+  D+ +S  RN IE
Sbjct: 1117 STTLMNLVMQFRKVCNHPDLFERAETKSPFSLAHFAETASFVREGQNVDVRYS-TRNLIE 1175

Query: 779  YKIPKIVHQEILQSSEILCSAVGHGISRELFQKRF-----NIFSAENVYQSIFSLASGSD 833
            Y +P+     +L SS       G    +  FQ ++     NIF+ EN+ +S+    +   
Sbjct: 1176 YDLPR-----LLFSSSGRLDVAGPDNEKVGFQNKYLQHLMNIFTPENIKRSVEDDGA--- 1227

Query: 834  ASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEAMDGE 893
                    F F    D S  E    +     ER +    + DR    G+  ++    D  
Sbjct: 1228 --------FSFLRFADTSINEAYEQSHLGVFERAVRRRGQSDRLSQLGV--IYDNEGDQT 1277

Query: 894  LNENHPDRGKVRAVTRLLLIPSRSETNLLRRKFTIGP-GYDPCEDLVV---SHQERLLSN 949
             N   P          L  I  R++   +   + + P GY    DL+    S  ER   N
Sbjct: 1278 ANSVLPH--------SLFNIVERNDRQAV---YDVAPEGY--MRDLMTVSESSFERQGLN 1324

Query: 950  IKLLNATYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKP 1009
            +    A+    P A APPI + CS +        E +D +    +    R +    P + 
Sbjct: 1325 VIEPCAS----PAASAPPIFISCSGQT----ALRETNDTFFSVPV----RHALYSTPSRQ 1372

Query: 1010 GGPHQLIQEIDS---ELP--VAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDIL 1064
                 L +++D     LP  + KP            P M+ F     +TDSGKL  LD L
Sbjct: 1373 LEEQILEKKLDPAPFSLPPMLPKPLSAKGRYTHIEVPSMRRF-----VTDSGKLAKLDEL 1427

Query: 1065 LKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDI 1124
            L+ L+A  HRVLL+ QMT+M++++E+Y+ YR Y+Y RLDGS+ + DRRD V DFQ R DI
Sbjct: 1428 LRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDI 1487

Query: 1125 FVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKET 1184
            FVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLGQT+ VTVYRLI + T
Sbjct: 1488 FVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGT 1547

Query: 1185 VEEKILQRASQKNTVQQLVMTGGHVQGDIL-------APEDVVSLLLDDAQ---LEQKLR 1234
            +EE+I +RA QK  VQ++V++GG   G            +D+   L DD Q   +EQK +
Sbjct: 1548 IEERIRKRALQKEEVQRVVISGGAAGGVDFNTRNRESRTKDIAMWLADDEQAELIEQKEK 1607

Query: 1235 E 1235
            E
Sbjct: 1608 E 1608


>sp|A7TJI3|INO80_VANPO Putative DNA helicase INO80 OS=Vanderwaltozyma polyspora (strain ATCC
            22028 / DSM 70294) GN=INO80 PE=3 SV=1
          Length = 1556

 Score =  749 bits (1934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/1040 (41%), Positives = 624/1040 (60%), Gaps = 101/1040 (9%)

Query: 203  NIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRKLARD 262
            ++ RKD  K  +        +  + K+ +  C RE +    R+ K ++    R R+  R+
Sbjct: 575  DLARKDSAKMARLVQQIQSIRATNFKKNSSVCAREARKWQQRNFKQVKDFQTRARRGIRE 634

Query: 263  MLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHFMQNK 322
            ML +WK+ ++E  +++K+ E+ A E  ++E+E RE  RQ ++LNFL+ QTELYSHF+ +K
Sbjct: 635  MLNYWKKNEREERDLKKKAEKVAMEQARKEEEDRENVRQAKKLNFLLTQTELYSHFIGSK 694

Query: 323  SSSQPSEVLPVGNDKP-----------NDQELLLSSS---EFEPGEEEDPEEAELKKEAL 368
              +   E    GN K            N+ +L  +SS   +F+  + ++ ++ EL+++A 
Sbjct: 695  IKTNELE----GNMKDDEFDENEDNLMNNIDLDSTSSVKTDFKTIDFDNEDDDELRRKAA 750

Query: 369  KAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQ 428
            + A N + K +  T  FD + S   E                  ++  NP+++     ++
Sbjct: 751  QNASNVLQKSREKTKKFDNDTSNGEE------------------LNFQNPTSLGEV-VIE 791

Query: 429  TPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGP 488
             P +   +LKEYQLKGL WL N Y+QG+NGILADEMGLGKT+Q+++ LAHLAE+ NIWGP
Sbjct: 792  QPSILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAEKYNIWGP 851

Query: 489  FLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILI 547
            FLVV PAS L+NW +EIS+F P  K LPYWG   +R +LR+  + K L Y +D+ FH++I
Sbjct: 852  FLVVTPASTLHNWVNEISKFVPQFKILPYWGNSNDRKILRRFWDRKNLRYNKDSPFHVMI 911

Query: 548  TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
            TSYQ++V+D  Y +++KWQYM+LDEAQAIKSS S RW+ LLSF+CRNRLLLTGTPIQNNM
Sbjct: 912  TSYQMVVSDTSYLQKMKWQYMILDEAQAIKSSQSSRWRNLLSFHCRNRLLLTGTPIQNNM 971

Query: 608  AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
             ELWALLHFIMP+LFDSH++FN+WFSK IESHAE    LN+ QL RLH ILKPFMLRRVK
Sbjct: 972  QELWALLHFIMPSLFDSHDEFNDWFSKDIESHAEANTKLNQQQLRRLHMILKPFMLRRVK 1031

Query: 668  KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLA-GLFDNSRGHLNEKKILNLMNIV 726
            K+V SEL  K E+ V C L+ RQ   YQ +K+++S    + +N+ G  +     N++N V
Sbjct: 1032 KNVQSELGDKIEIDVMCDLTQRQAKLYQILKSQMSTNYDVIENAAGDDDTGSDQNMINAV 1091

Query: 727  IQLRKVCNHPELFERNEGS---SYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPK 783
            +Q RKVCNHP+LFER +     S+  FG+  +S L      L DI +S  RNPI Y +P+
Sbjct: 1092 MQFRKVCNHPDLFERADVDSPFSFSIFGK--SSSLSRDNEPLVDILYS-TRNPITYHLPR 1148

Query: 784  IVHQEILQSSEILCSAVGH-GISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKSETF 842
            +++ ++     IL +     G+  +L    F+IF+ E+  + I         S V   T+
Sbjct: 1149 LIYNDL-----ILPNYENDLGLKNKLLNYTFSIFNNESTCKEI---------SRVTGLTY 1194

Query: 843  GFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEAMDGELNENHPDRG 902
            G          E+  +     +   +     + RQ        F+E +   + +N     
Sbjct: 1195 G----------EIKRVVHRDLLMNAIHLKEPYSRQ-------TFLEKI-SVIEDNDKTFS 1236

Query: 903  KVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKLLNATYTFIPQ 962
             +   + L LI   ++ + L R  + G       + +++ +E++  N      + ++ P 
Sbjct: 1237 DMNFKSNLKLIERSAKLDALSRVTSTG-----VLNSLLNIKEQVFDNEYYNAISRSYHPN 1291

Query: 963  AQAPPINVQC-SDRNFTYRMTEEQHDPWLKRLLIGF-ARTSENIGPRKPGGPHQLIQEID 1020
              + P+++Q   +R+F+ +  EE   P + + L    A T  N+   K    H       
Sbjct: 1292 VSSSPVSIQVLGNRHFSIQQEEELFKPVISKALSEIPASTQYNMAVEKKIPLH------- 1344

Query: 1021 SELPVAK--PA-LQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLL 1077
             + PV+   P+ L  ++  + S P M  F     +T+S KL+ LD LL  L+  +HRVL+
Sbjct: 1345 -DFPVSGLYPSPLNKSFSSYISMPSMDRF-----ITESAKLKKLDELLVELKKGDHRVLI 1398

Query: 1078 FAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLG 1137
            + QMTKM++++E+Y+ YR+Y ++RLDGSS + DRRD+V D+Q R DIF+FLLSTRAGGLG
Sbjct: 1399 YFQMTKMMDLMEEYLTYRQYSHIRLDGSSKLEDRRDLVHDWQTRPDIFIFLLSTRAGGLG 1458

Query: 1138 INLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKN 1197
            INLTAADTVIFY+SDWNPT+D QAMDRAHRLGQT+ VTVYRL+ + T+EE++  RA QK 
Sbjct: 1459 INLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQKE 1518

Query: 1198 TVQQLVMTGGHVQGDILAPE 1217
             VQQ+VM G  +Q D+   E
Sbjct: 1519 HVQQVVMEGKTLQKDVKTIE 1538


>sp|Q6BGY8|INO80_DEBHA Putative DNA helicase INO80 OS=Debaryomyces hansenii (strain ATCC
            36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
            GN=INO80 PE=3 SV=2
          Length = 1364

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/1084 (41%), Positives = 643/1084 (59%), Gaps = 98/1084 (9%)

Query: 184  KDPSVIEKEEMEKIGKVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVS 243
            K+  +I K+       +W ++ RKD PK  +      + + I+ K+ +    RE K    
Sbjct: 319  KEQKIITKQYDNTFVSIWKDLSRKDGPKVSRLMQQSTQAKMINLKKTSILAAREAKRWQL 378

Query: 244  RSLKLMRGAAIRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQ 303
            ++ +  +    + R+  R+M  FWKR ++   E+RK+ E+E  +  K+E+E RE+KRQ +
Sbjct: 379  KNNRNQKDLTTKARRAMREMFNFWKRNERIERELRKKHEKEILDKAKKEEEERESKRQSR 438

Query: 304  RLNFLIQQTELYSHFMQNK--------SSSQPSEVLPVGN---DKPNDQELLLSSSEFEP 352
            +LNFLI QTELYSHF+  K        + S P+      N   DK ++  +     +F  
Sbjct: 439  KLNFLITQTELYSHFIGKKIKTDEFEGTDSDPNANFKSANHHYDKYSN--IDGEGKDFNS 496

Query: 353  GEEEDPEEAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGN 412
             + ++ +E  L K A   AQ A+   K     FD +  K  +    E             
Sbjct: 497  IDFDNEDEESLNKAAAVNAQIALEAAKTKAQAFDNDPLKNPDTNGEE------------- 543

Query: 413  IDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQA 472
            ++  NP+ +   +  Q P+L K +LKEYQ+KGL WL N YEQG+NGILADEMGLGKT+Q+
Sbjct: 544  MNFQNPTLLGDINISQ-PDLLKCTLKEYQVKGLNWLANLYEQGINGILADEMGLGKTVQS 602

Query: 473  MAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNIN 532
            ++ LA+LAE  NIWGPFLVV PAS L+NW  EISRF P+ K +PYWG  ++R VLRK  +
Sbjct: 603  ISVLAYLAETHNIWGPFLVVTPASTLHNWQQEISRFVPEFKVIPYWGNAKDRKVLRKFWD 662

Query: 533  PKRL-YRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFN 591
             K   Y +DA FH+L+TSYQL+VAD  YF+++KWQYM+LDEAQAIKSS S RWK+LLSF+
Sbjct: 663  RKNFRYGKDAPFHVLVTSYQLVVADAAYFQKMKWQYMILDEAQAIKSSQSSRWKSLLSFS 722

Query: 592  CRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQL 651
            CRNRLLLTGTPIQN+M ELWALLHFIMP+LFDSH++F++WFSK IESHA+    LNE QL
Sbjct: 723  CRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAQSNTELNEQQL 782

Query: 652  NRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR 711
             RLH ILKPFMLRR+KK+V SEL  K E+ V C L+ RQ+ +YQ + ++IS+  L D S 
Sbjct: 783  RRLHVILKPFMLRRIKKNVQSELGDKLEIDVFCDLTHRQKKYYQMLTSQISIMDLLD-SA 841

Query: 712  GHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIP-NSLLPPPFGELEDISF 770
             + ++    +LMN+V+Q RKVCNHP+LFER +  S   FG     S       ELE +S+
Sbjct: 842  NNSSDDSAQSLMNLVMQFRKVCNHPDLFERADVKSSFAFGRFAETSSFLRETNELE-MSY 900

Query: 771  SGVRNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLAS 830
            S   N I+Y +P+IV++EILQ +    + VG   SR+     FNI+   N+         
Sbjct: 901  S-TENLIKYNMPRIVYEEILQPT--FDNDVG---SRKKINNMFNIYHPSNIANDEL---- 950

Query: 831  GSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEAM 890
                     E F +   +D SP E+  L+K + +ER +      +R++     D+  E +
Sbjct: 951  ---------ENFSWLRFVDQSPQEMNNLSKQNIIERAIN-----NREY----SDINYERI 992

Query: 891  DGELNENHPDRGKVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNI 950
            +        D       ++LLLI      N L+    +       ++L  S ++++  ++
Sbjct: 993  NRLKYTYDEDNESFLPNSKLLLI------NELQNNHALISNSTYLKEL-YSIKKKVYEDM 1045

Query: 951  KLLNATYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLL--IGFARTSENIGPRK 1008
             + N      P  +APP+ V C + +F + + +   DP ++  L  + F R  E +    
Sbjct: 1046 VINNMKPAAEPLVKAPPVAVVCDNISFVHDLQDSLFDPKIRSSLMPLPFNRELELLKSSI 1105

Query: 1009 PGGPHQLIQEI--DSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLK 1066
            P      I E    + LP A         I    P M  F     +T+SGKL  LD LL 
Sbjct: 1106 P------ITEYPKSNMLPNAINKFIDYSNI--RMPSMNRF-----ITESGKLSKLDELLV 1152

Query: 1067 RLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFV 1126
             LR  +HRVL++ QMTKM++++E+Y+ YR+++Y+RLDGSS + DRRD+V D+Q + +IFV
Sbjct: 1153 DLRQNDHRVLIYFQMTKMMDLMEEYLTYRQHKYIRLDGSSKLDDRRDLVHDWQTKPEIFV 1212

Query: 1127 FLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVE 1186
            FLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLGQT+ VTVYRL+ + T+E
Sbjct: 1213 FLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLTRGTIE 1272

Query: 1187 EKILQRASQKNTVQQLVMTG----------GHVQGDI----LAPEDVVSLLL-DDAQLEQ 1231
            E++  RA QK  VQQ+VM G          G+ + D+    L  +D  +  L DD++ +Q
Sbjct: 1273 ERMRDRAKQKEQVQQVVMEGKSAIANKEESGNKKKDVAFLLLGNDDSSAAALNDDSEEKQ 1332

Query: 1232 KLRE 1235
             L++
Sbjct: 1333 NLQD 1336


>sp|O14148|INO80_SCHPO Putative DNA helicase ino80 OS=Schizosaccharomyces pombe (strain 972
            / ATCC 24843) GN=ino80 PE=1 SV=4
          Length = 1604

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/1024 (42%), Positives = 623/1024 (60%), Gaps = 87/1024 (8%)

Query: 204  IVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRKLARDM 263
            I RK+IP+ +K        +  +A++ ++ C RE +    R++K  +    + ++  R+ 
Sbjct: 630  IARKEIPRVYKIIQQNQYNRSTNARKTSQLCGREARRWQFRTIKNNKDMQTKAKRAMRET 689

Query: 264  LLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHFMQNKS 323
            ++FWKR ++   ++RK+ EREA +  K+E+ELRE++RQ ++L+FLI QTELYSHF+  K 
Sbjct: 690  MVFWKRNERVERDLRKKAEREALDRAKKEEELRESRRQARKLDFLITQTELYSHFVGRKM 749

Query: 324  SSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDPEEAELKKEALKAAQNAVSKQKMLTN 383
              +  + LP   +  +  E+      F+  EEED     +++ A+++AQ AV K +    
Sbjct: 750  DRE--QDLPSATNTASVSEI-----NFDSDEEED-----IRRLAVESAQEAVQKAR---- 793

Query: 384  TFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKGSLKEYQLK 443
                E S+L +A   ++     S    G ++  NP T+     V+ P++    LKEYQLK
Sbjct: 794  ----EHSQLFDANRQQSPNNSSSDMNEGEMNFQNP-TLVNAFEVKQPKMLMCKLKEYQLK 848

Query: 444  GLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWAD 503
            GL WL N YEQG+NGILADEMGLGKT+Q+++ +A+LAE  NIWGPFLV+APAS L+NW  
Sbjct: 849  GLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWGPFLVIAPASTLHNWQQ 908

Query: 504  EISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILITSYQLLVADEKYFRR 562
            EI+RF P LK +PYWG  ++R +LRK    K + Y  ++ FH+++TSYQL+V D +YF+ 
Sbjct: 909  EITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVVLDAQYFQS 968

Query: 563  VKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLF 622
            VKWQYM+LDEAQAIKSS+S RWK+LL+F CRNRLLLTGTPIQN M ELWALLHFIMP+LF
Sbjct: 969  VKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWALLHFIMPSLF 1028

Query: 623  DSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMV 682
            DSH +F+EWFSK IESHA+    LNE QL RLH ILKPFMLRRVKK+V SEL  K E  V
Sbjct: 1029 DSHNEFSEWFSKDIESHAQSNTQLNEQQLKRLHMILKPFMLRRVKKNVQSELGEKIEKEV 1088

Query: 683  HCKLSSRQQAFYQAIKNKISLAGLFDNS-RGHLNEKKILNLMNIVIQLRKVCNHPELFER 741
            +C L+ RQ+  YQA++ +IS+A L + +  G   +  + ++MN+V+Q RKVCNHP+LFER
Sbjct: 1089 YCDLTQRQKILYQALRRQISIAELLEKAILG--GDDTVASIMNLVMQFRKVCNHPDLFER 1146

Query: 742  NEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIVHQEILQSSEILCSAVG 801
             +  S L       S+     G   D+ ++  RN I + IP++++++       + S  G
Sbjct: 1147 EDVRSPLSLATWSKSIYINREGNFLDVPYN-TRNFITFSIPRLLYEQ-----GGILSVPG 1200

Query: 802  HGISRELFQKR-FNIFSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAK 860
               SR    K  +N+ +  N   +  S+ S  + SP     F +   +D SP        
Sbjct: 1201 LNTSRGFETKYLYNLMNIWNPEYTNDSIKSNPEGSP-----FSWLRFVDESP-------- 1247

Query: 861  GSFMERLLFAMLRWDRQFLDGILDVFMEA-MDGELNENHPDR-----GK-VRAVTRLLLI 913
                 + LF      + F + ++    EA     L E    R     GK    V ++LL+
Sbjct: 1248 -----QTLF------QTFQNPVVHYLDEAEASSSLKEEQLCRQEFCYGKDYSNVRKMLLL 1296

Query: 914  P-SRSETNLLRRKFTIGPGYDPCEDLVVSHQERLL----SNIKLLNATYTFIPQAQAPPI 968
            P S ++ ++L        G D  ED    H   +L    S + L       + +A APPI
Sbjct: 1297 PKSITKVDVL--------GSDFKEDSPFYHLTHVLEESDSQLDLTLLDSVLVQRASAPPI 1348

Query: 969  NVQC-SDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPVAK 1027
            ++ C   R FT   +  Q D      L    +  E++          +  +  S+LP+ +
Sbjct: 1349 DIYCPGSRQFTVLQSRFQRDHLWSHYLYQPLKGEEDLI---------INNQAVSKLPIPR 1399

Query: 1028 PALQLTYQIF-GSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLN 1086
              L  ++ I  GS   ++     + + DSGKL  LD LL  L+A +HRVL++ QMT+M++
Sbjct: 1400 KPLLPSFGIAKGSYSNVRIPSMLRFIADSGKLSKLDKLLVELKANDHRVLIYFQMTRMID 1459

Query: 1087 ILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTV 1146
            ++E+Y+ +R+Y+YLRLDGSS I  RRDMV ++Q R ++FVFLLSTRAGGLGINLTAADTV
Sbjct: 1460 LMEEYLTFRQYKYLRLDGSSKISQRRDMVTEWQTRPELFVFLLSTRAGGLGINLTAADTV 1519

Query: 1147 IFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTG 1206
            IFY+SDWNP++D QAMDRAHR+GQ K VTVYR I + T+EE+I+ RA +K  VQ++V++G
Sbjct: 1520 IFYDSDWNPSIDSQAMDRAHRIGQQKQVTVYRFITRGTIEERIVIRAKEKEEVQKVVISG 1579

Query: 1207 GHVQ 1210
            G  +
Sbjct: 1580 GETR 1583


>sp|A7EQA8|INO80_SCLS1 Putative DNA helicase INO80 OS=Sclerotinia sclerotiorum (strain ATCC
            18683 / 1980 / Ss-1) GN=INO80 PE=3 SV=1
          Length = 1707

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/1202 (39%), Positives = 675/1202 (56%), Gaps = 130/1202 (10%)

Query: 78   GSLAAMMANDKRFGPRSRVGMGEPRPQYESLQARLKALVASNSPQKFSLKVSDTGNSS-- 135
            GS++   A D     + + G   PR   E  QA   +  A+        +  D G S   
Sbjct: 490  GSMSTFTAVDPDSTKKPKRGGARPRKSKEQKQAEKDSAAAAQ-------EAIDKGESPAL 542

Query: 136  --IPEGAAGSIQRSILSEGGILQVYYVKVLEKGETYEIIERALPKKVKVKKDPSVIEKEE 193
              I + A     + + S+ G+ ++  +K     E  E+ E +          PS    + 
Sbjct: 543  MPIRDAAEFKDMKPLPSKEGVTKIK-LKFKAPAEPVEVKEES----------PSAPVDQH 591

Query: 194  MEKI-----GKVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKL 248
              K+      ++W ++ RK++PK  K     +  +  + K+ A    +E K    R+ K 
Sbjct: 592  NTKMYHVVYDQIWKDLARKEVPKVFKLAVDSYSIRASNLKKTAILASKEAKRWQLRTNKG 651

Query: 249  MRGAAIRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFL 308
             +    R +++ R+M+ FWKR ++E  + R+  E++  E  K+ +  REA RQ+++LNFL
Sbjct: 652  TKDLQARAKRVMREMMSFWKRNEREERDTRRAAEKQEIENAKKAEADREANRQKRKLNFL 711

Query: 309  IQQTELYSHFMQNK--------SSSQPSEVLPVGND--KPNDQELLLSS-----SEFEPG 353
            I QTELYSHF+  K        S+  P   +P   D  KP+  +L   +     + FE  
Sbjct: 712  ISQTELYSHFIGKKIKTDEVERSTDHPDVAVPDKADHAKPDHGDLPEGTAPAKVTNFEDL 771

Query: 354  EEEDPEEAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNI 413
            + +  +E+ LK  A+  AQNA+ + +     F+ +      A D E  M   + AG G++
Sbjct: 772  DFDAEDESVLKAAAMANAQNAIQEAQNKARAFNKKDDA--PAMDDEGEMNFQNPAGMGDV 829

Query: 414  DLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAM 473
            D            ++ P++ +  LKEYQLKGL WLVN YEQG+NGILADEMGLGKT+Q++
Sbjct: 830  D------------IEQPKMLQAQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSI 877

Query: 474  AFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINP 533
            + +A+LAE+  IWGPFLVVAPAS L+NW  EI++F P LK LPYWG   +R VLRK  + 
Sbjct: 878  SVMAYLAEKHGIWGPFLVVAPASTLHNWQQEITKFVPRLKVLPYWGTAADRKVLRKFWDR 937

Query: 534  KRL-YRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNC 592
            K + Y  DA FH+L+TSYQL+V+D  YF+++KWQYM+LDEAQAIKSS S RWK+LL F+C
Sbjct: 938  KHITYTEDAPFHVLVTSYQLVVSDVAYFQKMKWQYMILDEAQAIKSSQSSRWKSLLGFHC 997

Query: 593  RNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLN 652
            RNRLLLTGTPIQNNM ELWALLHFIMP+LFDSH++F+EWFSK IESHA+    LNE QL 
Sbjct: 998  RNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLK 1057

Query: 653  RLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR- 711
            RLH ILKPFMLRRVKK V  EL  K E  + C L+ RQ+A+Y  ++N+IS+  L + +  
Sbjct: 1058 RLHMILKPFMLRRVKKHVQKELGDKIEEDIFCDLTYRQRAYYSNLRNQISIMDLIEKATI 1117

Query: 712  GHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYL---YFGEIPNSLLPPPFGELEDI 768
            G  N+     LMN+V+Q RKVCNHP+LFER E +S L   YF E  + L     G    +
Sbjct: 1118 GDDNDTG--TLMNLVMQFRKVCNHPDLFERAETTSPLSFSYFAEAGSFLRE---GSNVTV 1172

Query: 769  SFSGVRNPIEYKIPKIVHQEILQSSEILCSAVGH-----GISRELFQKRFNIFSAENVYQ 823
            ++S  RN IEY +P+++ +E  +         GH     G+  +  +  FN++  EN+  
Sbjct: 1173 AYSA-RNMIEYSLPRLIWREGGR-----LDLPGHDNEHAGVKAKCLESLFNVWKPENIVD 1226

Query: 824  SIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGIL 883
            S     +  D +      F +    + S  E++  ++     R +  + R   Q L G L
Sbjct: 1227 S-----AKEDGA------FSWLRFTNTSVQELSTASRKDVFARAVDLVKR--PQTL-GRL 1272

Query: 884  DVFMEAMDGELNENH-PDRGKVRAVTRLLLIPSRSETN--LLRRKFTIGPGYDPCEDLVV 940
            ++     D E ++N+ P    ++ V R    P    TN   L + F +    D      +
Sbjct: 1273 NIV---YDEEEDKNYTPVHSMLQIVNRKDRKPLAEVTNEGYLNKLFNV--AKDVWGQSGM 1327

Query: 941  SHQERLLSNIKLLNATYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFART 1000
            S  E+               P A APPI V CS R       +   +  ++R L G +  
Sbjct: 1328 SRMEQCGR------------PSATAPPIEVTCSSRGAVIERQKILFNVPMRRALFGPSPV 1375

Query: 1001 SENIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQT 1060
             E         P  L       LP+     Q    I    P M+ F     +TDSGKL  
Sbjct: 1376 EEKALITSKVSP--LFYPPKPMLPLPTSEKQRFTNI--KVPSMRRF-----VTDSGKLAK 1426

Query: 1061 LDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQH 1120
            LD LL +L+   HRVLL+ QMT+M++++E+Y+ YR Y+YLRLDGS+ + DRRD V DFQ 
Sbjct: 1427 LDSLLTKLKEGGHRVLLYFQMTRMIDLMEEYLTYRNYKYLRLDGSTKLEDRRDTVHDFQT 1486

Query: 1121 RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLI 1180
            R +IF+FLLSTRAGGLGINLT+ADTVIFY+SDWNPT+D QAMDRAHRLGQT+ VTVYR+I
Sbjct: 1487 RPEIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRMI 1546

Query: 1181 CKETVEEKILQRASQKNTVQQLVMTGGHVQG---DILAPE----DVVSLLLDD---AQLE 1230
             + T+EE+I +RA QK  VQ++VMTGG   G   +  + E    D+   L+DD   A++E
Sbjct: 1547 TRGTIEERIRKRALQKEEVQKVVMTGGAGGGVDFNTRSKENRTKDIAMWLVDDEEAAEIE 1606

Query: 1231 QK 1232
            +K
Sbjct: 1607 RK 1608


>sp|Q4IL82|INO80_GIBZE Putative DNA helicase INO80 OS=Gibberella zeae (strain PH-1 / ATCC
            MYA-4620 / FGSC 9075 / NRRL 31084) GN=INO80 PE=3 SV=1
          Length = 1904

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/1056 (41%), Positives = 615/1056 (58%), Gaps = 80/1056 (7%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            ++W ++ RKD+ K  K     +  +  + K+ A    +E K    R+ K  +    R ++
Sbjct: 808  QIWRDMARKDVNKTFKLAVDSYATKASNLKKTAILASKEAKRWQLRTNKGTKDLQARAKR 867

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
            + RDM+ FWKR ++E  ++RK  E++  E  ++E+  REA RQ+++LNFLI QTELYSHF
Sbjct: 868  VMRDMMGFWKRNEREERDLRKAAEKQEIENARKEEADREAARQKRKLNFLISQTELYSHF 927

Query: 319  MQNKSSSQPSEVLPVGNDKP--------NDQELLLSSSEFEP--GEEEDPEEAELKKEAL 368
            +  K  +   E      D P         DQ++L       P  G+  + E  + ++   
Sbjct: 928  IGKKIKTDEVER---STDNPEIAKDAHQTDQKMLDIDEPTGPVIGKVTNFENLDFEE--- 981

Query: 369  KAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQ 428
                +   +   + N  +      ++A D     LD+     G ++  NP+ +     ++
Sbjct: 982  --GSDEALRAAAMANAQNAIAEAQKKARDFNNQGLDMD--DEGEMNFQNPTGLGDVE-IE 1036

Query: 429  TPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGP 488
             P+L    LKEYQLKGL WLVN YEQG+NGILADEMGLGKT+Q+++ +A+LAE+ +IWGP
Sbjct: 1037 QPKLINAQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAEKHDIWGP 1096

Query: 489  FLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILI 547
            FLVVAPAS L+NW  EI++F P+ K LPYWGG  +R VLRK  + K   YR+DA FH+ +
Sbjct: 1097 FLVVAPASTLHNWQQEIAKFVPEFKILPYWGGASDRKVLRKFWDRKHTTYRKDAPFHVCV 1156

Query: 548  TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
            TSYQL+V+D  YF++++WQYM+LDEAQAIKSS S RWK LL+F+CRNRLLLTGTPIQNNM
Sbjct: 1157 TSYQLVVSDVAYFQKMRWQYMILDEAQAIKSSQSSRWKALLNFHCRNRLLLTGTPIQNNM 1216

Query: 608  AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
             ELWALLHFIMP+LFDSH++F+EWFSK IESHA+    LNE QL RLH ILKPFMLRRVK
Sbjct: 1217 QELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPFMLRRVK 1276

Query: 668  KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
            K V  EL  K E+ + C L+ RQ+A+Y  ++N+I++  L + +    +++    LMN+V+
Sbjct: 1277 KHVQKELGDKIELDIFCDLTYRQRAYYSNLRNQINIMDLVEKA-TMGDDQDSGTLMNLVM 1335

Query: 728  QLRKVCNHPELFERNEGSSYL---YFGEIPNSLLPPPFGELEDISFS-GVRNPIEYKIPK 783
            Q RKVCNHP+LFER E +S     YF E  + +      E  D++     RN IEY++P+
Sbjct: 1336 QFRKVCNHPDLFERAEVNSPFACAYFAETASFVR-----EGNDVAVGYSSRNLIEYELPR 1390

Query: 784  IVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKSETFG 843
            +V ++  +  +    +   G          NI+S +N+  S       SD     S+ F 
Sbjct: 1391 LVWRDGGRVHKAGPDSQVAGWKNRTLNHLMNIWSPDNIRDS-------SDG----SKAFS 1439

Query: 844  FTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDV-FMEAMDGELNENHPDRG 902
            +    D SP E       S + R    + + DR    G ++V + +  D      H    
Sbjct: 1440 WLRFADTSPNEAYQATHQSLIARAAKELQKRDRL---GYMNVAYSDTEDANFTPAHA-LF 1495

Query: 903  KVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKLLNATYTFIPQ 962
            ++R       +   +   +L R   +  G          + E  L  ++         P+
Sbjct: 1496 QIRPRQNRKPLADITNEGILSRLMNVAQG---------DYDESGLGRLEPAGR-----PR 1541

Query: 963  AQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEI-DS 1021
            A APPI V C      +  +E   +  ++++L G     E     K     +L  E+  +
Sbjct: 1542 ASAPPIQVSCRSWASEFERSEVLFNAPIRKILYGPTVFEEKALVEK-----KLPMELWPT 1596

Query: 1022 ELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQM 1081
               + KP  +       S P MQ F     +TDSGKL  LD LL +L++E HRVLL+ QM
Sbjct: 1597 RQMLPKPDHEKKGFTNISIPSMQRF-----VTDSGKLAKLDDLLFKLKSEGHRVLLYFQM 1651

Query: 1082 TKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLT 1141
            T+M++++E+Y+ YR Y+Y RLDGS+ + DRRD V DFQ R +IF+FLLSTRAGGLGINLT
Sbjct: 1652 TRMIDMMEEYLTYRNYKYCRLDGSTKLEDRRDTVHDFQTRPEIFIFLLSTRAGGLGINLT 1711

Query: 1142 AADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQ 1201
             ADTVIFY+SDWNPT+D QAMDRAHRLGQTK VTVYRLI + T+EE+I +RA QK  VQ+
Sbjct: 1712 TADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQR 1771

Query: 1202 LVMTGGHVQGDI---LAPE----DVVSLLLDDAQLE 1230
            +V+ GG    D     APE    D+   L DD Q E
Sbjct: 1772 VVIQGGGASVDFSGRRAPENRNRDIAMWLADDEQAE 1807


>sp|A2R9H9|INO80_ASPNC Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 /
            FGSC A1513) GN=ino80 PE=3 SV=1
          Length = 1697

 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/1084 (40%), Positives = 616/1084 (56%), Gaps = 115/1084 (10%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            ++W +I RKDIPK ++        +Q + ++ A+   ++ +    R+ K M+    R ++
Sbjct: 580  QIWRDIARKDIPKVYRIKALSLSTRQENLRKTAQLASKQSRKWQERTNKSMKDTQARAKR 639

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
              R+M+ FWKR ++E  ++R+  E++  E+ K+ +  REA RQ+++LNFLI QTELYSHF
Sbjct: 640  TMREMMSFWKRNEREERDLRRLAEKQEIESAKKAEAEREANRQRRKLNFLISQTELYSHF 699

Query: 319  MQNKSSSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDPEEAELKKEALKAAQNAVSKQ 378
            +  K       +     D   D  +  +    +PG+ +D    ++      A     + +
Sbjct: 700  IGRK-------IKGAEGDAAGDTAVEATGETVQPGKGQD-HTIDMPSSVADAGTKVTNFE 751

Query: 379  KMLTNTFDTE-------------CSKLREAADTEAAMLD----VSVAGSGNIDLHNPSTM 421
             +    FD E              + ++EA D   A       +     G ++  NP+++
Sbjct: 752  DL---DFDAEDETALRQAAMANAQNAVQEAQDRARAFNSGQNQMDALDEGELNFQNPTSL 808

Query: 422  PVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
                  Q P +    LKEYQLKGL WLVN YEQG+NGILADEMGLGKTIQ+++ +A+LAE
Sbjct: 809  GDIEISQ-PNMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAE 867

Query: 482  EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRD 540
              NIWGPFLV+APAS L+NW  EI++F PD+K LPYWG  ++R +LRK  + K + Y ++
Sbjct: 868  VHNIWGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKILRKFWDRKHITYTKE 927

Query: 541  AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
            + FH+L+TSYQL+V D +YF++VKWQYM+LDEAQAIKSS S RWK LL F+CRNRLLLTG
Sbjct: 928  SEFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLTG 987

Query: 601  TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
            TPIQNNM ELWALLHFIMPTLFDSH++F+EWFSK IESHA+    LNE QL RLH ILKP
Sbjct: 988  TPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKP 1047

Query: 661  FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
            FMLRRVKK V  EL  K E  + C L+ RQ+A+Y  ++N++S+  L + +    +E    
Sbjct: 1048 FMLRRVKKHVQQELGDKVEKDIFCDLTYRQRAYYTNLRNRVSIMDLIEKA-AVGDEADST 1106

Query: 721  NLMNIVIQLRKVCNHPELFERNEGSSYL---YFGEIPNSLLPPPFGELEDISFSGVRNPI 777
             LMN+V+Q RKVCNHP+LFER E  S     YF E  + +     G   D+ +S  RN I
Sbjct: 1107 TLMNLVMQFRKVCNHPDLFERAETKSPFSTAYFAETASFVRE---GNNVDVRYS-TRNLI 1162

Query: 778  EYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPV 837
            EY +P++           LC A G          R ++  AEN +               
Sbjct: 1163 EYPMPRL-----------LCGAGG----------RVDVAGAENPHAGFRGRY-------- 1193

Query: 838  KSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGIL-DVFMEAMDGELNE 896
                    HLM++   E     K S  +   F+ LR    F+D  L + + ++  G    
Sbjct: 1194 ------LNHLMNIFTPENM---KQSIQDDGAFSFLR----FVDTSLGEAYEQSHLGIFER 1240

Query: 897  NHPDRGKVRAVTRLLLIPSRSE----TNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKL 952
                RG+V  ++RL +     +    + L    F I    D      V+ +  +   + +
Sbjct: 1241 AVRRRGQVNRLSRLNVAYDDDKELAGSALPHTLFNIVDRNDKHAVNEVAAEGIMRDLMTV 1300

Query: 953  LNATY----------TFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSE 1002
              +TY             P A APPI+V  S    +    +   +  ++  L  ++  S 
Sbjct: 1301 SQSTYEREGLNIIEPCVSPAASAPPISVVSSSHIPSIETRDTLFNVSVRHAL--YSTPSR 1358

Query: 1003 NIGPRKPGGPHQLIQEIDSELPVA-KPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTL 1061
             +         Q+I++     P +  P L       G    ++     + +TDSGKL  L
Sbjct: 1359 QVD-------EQIIEKKVDPTPYSLAPMLPKPISAKGRYTHIEVPSMRRFVTDSGKLAKL 1411

Query: 1062 DILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHR 1121
            D LL+ L+A  HRVLL+ QMT+M++++E+Y+ YR Y+Y RLDGS+ + DRRD V DFQ R
Sbjct: 1412 DELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQR 1471

Query: 1122 SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLIC 1181
             +IFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLGQT+ VTVYRLI 
Sbjct: 1472 PEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLIT 1531

Query: 1182 KETVEEKILQRASQKNTVQQLVMTGGHVQGDIL-------APEDVVSLLLDDAQ---LEQ 1231
            + T+EE+I +RA QK  VQ++V+TGG   G            +D+   L DD Q   +EQ
Sbjct: 1532 RGTIEERIRKRALQKEEVQRVVITGGAAGGVDFNTRNRESRTKDIAMWLADDEQAELIEQ 1591

Query: 1232 KLRE 1235
            K +E
Sbjct: 1592 KEKE 1595


>sp|A4R227|INO80_MAGO7 Putative DNA helicase INO80 OS=Magnaporthe oryzae (strain 70-15 /
            ATCC MYA-4617 / FGSC 8958) GN=INO80 PE=3 SV=1
          Length = 1944

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/1079 (41%), Positives = 614/1079 (56%), Gaps = 106/1079 (9%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            ++W ++ RKD+ K ++     +  +  + K+ A    +E K    R+ K M+    R ++
Sbjct: 839  QIWRDMARKDVSKVYRLATDSYYTKASNLKKTAILAAKEAKRWQLRTNKGMKDLQARGKR 898

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
            + RDM+ FWKR ++E  ++RK  ER+  E  ++E+  REA RQ+++LNFLI QTELYSHF
Sbjct: 899  VMRDMMTFWKRNEREERDLRKAAERQELENARKEEADREAARQKRKLNFLISQTELYSHF 958

Query: 319  MQNK--------SSSQPSEVLPVGNDKPNDQELLLSSSEFEPG------------EEEDP 358
            +  K        S+ +P        +KP  +  L       P             + ED 
Sbjct: 959  IGKKIKTDEVERSTDRPEVAAEEQKNKPAGENALTVKEPTGPVGAKVTNFENLDFDAEDD 1018

Query: 359  EEAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNP 418
            E  +    A      A +++K      D E  +                   G ++  NP
Sbjct: 1019 ETLQAAAMANAQNAIAEAQRKARNFNNDDEPDE------------------DGEMNFQNP 1060

Query: 419  STMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAH 478
            + +     ++ P+L   +LKEYQLKGL WLVN YEQG+NGILADEMGLGKTIQ+++ +A+
Sbjct: 1061 TGLGDVE-IEQPKLLTATLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAY 1119

Query: 479  LAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKR-LY 537
            LAE  +IWGPFLVVAPAS L+NW  EI RF PDLK +PYWG   +R +LRK  + K   Y
Sbjct: 1120 LAEHHDIWGPFLVVAPASTLHNWEQEIKRFVPDLKIVPYWGSASDRKILRKFWDRKHSTY 1179

Query: 538  RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
            +RDA FH+ ITSYQ++V+D  YF+++KWQYM+LDEAQAIKSS S RWK LLSF+CRNRLL
Sbjct: 1180 KRDAQFHVAITSYQMVVSDVAYFQKMKWQYMILDEAQAIKSSQSSRWKCLLSFHCRNRLL 1239

Query: 598  LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAI 657
            LTGTPIQNNM ELWALLHFIMP+LFDSHE+F++WFSK IESHA+    LNE QL RLH I
Sbjct: 1240 LTGTPIQNNMQELWALLHFIMPSLFDSHEEFSDWFSKDIESHAQSNSKLNEDQLKRLHMI 1299

Query: 658  LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSR-GHLNE 716
            LKPFMLRRVKK V  EL  K E+ V+C L+ RQ+A+Y  ++N+IS+  L + +  G  N+
Sbjct: 1300 LKPFMLRRVKKHVQKELGDKIELDVYCDLTYRQRAYYANLRNQISIMDLIEKATLGDDND 1359

Query: 717  KKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNP 776
               L  MN+V+Q RKVCNHP+LFER + SS L       +      G    + ++  R+ 
Sbjct: 1360 SGTL--MNLVMQFRKVCNHPDLFERADTSSPLALVRFAETGSFAREGNDVTVGYT-TRSV 1416

Query: 777  IEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASP 836
            +EY +P+++ ++  + ++        G       +  NI+S+ N+ +S+     G+D   
Sbjct: 1417 VEYILPRLLWRDGGRLTKAGSDNPSAGFRSRYLGEMMNIWSSTNIRESV----DGTD--- 1469

Query: 837  VKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEAMDGELNE 896
                 F F    D S AE   + K     R      R +R     + ++ +   D E + 
Sbjct: 1470 ----NFSFLRFADTSIAEAEKVGKTDLFARASELAQRRNR-----LANMHVSYDDDEEDN 1520

Query: 897  NHPDRGKVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLV-VSHQERLLSNIKLLNA 955
              P          L LI  R +   L    + G      ++L+ VSH   +  +  L   
Sbjct: 1521 FTPAHA-------LFLIRQRQDRTALSEITSEGA----LQNLMNVSHV--MYEDANLPRM 1567

Query: 956  TYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQL 1015
                 P A APPI V C   +     T+ + D    R+L          GP        +
Sbjct: 1568 DQAARPGASAPPIEVVCHTSS-----TQIERD----RVLFNVPMRKALFGPNLDEQKEFV 1618

Query: 1016 IQEIDSELPVAKPALQLT---YQIFGS--CPPMQSFDPAKLLTDSGKLQTLDILLKRLRA 1070
            +Q++  E     P L       Q F S   P M+ F     +T+SGKL  LD LL +L+A
Sbjct: 1619 LQKVPVEQLPPAPLLPKPDNERQRFTSITVPSMRQF-----ITNSGKLAKLDELLFKLKA 1673

Query: 1071 ENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLS 1130
              HRVLL+ QMT+M++++E+Y+ YR ++Y RLDGS+   DRRD V DFQ    IFVFLLS
Sbjct: 1674 GGHRVLLYFQMTRMIDLMEEYLTYRNWKYCRLDGSTKFEDRRDTVHDFQTNPSIFVFLLS 1733

Query: 1131 TRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKIL 1190
            TRAGGLGINLT+ADTVIFY+SDWNPT+D QAMDRAHRLGQT+ VTVYRLI + T+EE+I 
Sbjct: 1734 TRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIR 1793

Query: 1191 QRASQKNTVQQLVMTGGHVQGDIL------APE----DVVSLLLDDAQ---LEQKLREL 1236
            +RA QK  VQ++V+TGG      +      APE    D+   L DD Q   +E++ REL
Sbjct: 1794 KRAMQKEEVQRVVITGGAGASSGVDFSGRRAPENRNRDIAMWLADDDQAELIERREREL 1852


>sp|Q6CNY4|INO80_KLULA Putative DNA helicase INO80 OS=Kluyveromyces lactis (strain ATCC 8585
            / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
            GN=INO80 PE=3 SV=1
          Length = 1489

 Score =  731 bits (1887), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/1033 (41%), Positives = 604/1033 (58%), Gaps = 107/1033 (10%)

Query: 200  VWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAET---CQREVKMKVSRSLKLMRGAAIRT 256
            +W ++ R+D  +  +      + Q I  + F +T   C +E +    R+ + ++    R 
Sbjct: 518  IWKDMARRDSGRISRQL---QQIQSIRGQNFRKTSSLCAKEARRWQMRNFRQVKDFQTRA 574

Query: 257  RKLARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYS 316
            R+  R+M  FWK+ ++E  E++K+ E+EA E  K+E+E RE  R  ++LNFL+ QTELYS
Sbjct: 575  RRGIREMSSFWKKNEREEREMKKKAEKEAIEQAKKEEEQRENLRAAKKLNFLLTQTELYS 634

Query: 317  HFMQNKSSSQPSE-------VLPVGNDKPNDQELLLSSSEFEPGEEEDPEEAELKKEALK 369
            HF+ +K  +   E       +  + N+K    +L  +++     E  D    + +K  L 
Sbjct: 635  HFIGSKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLM 694

Query: 370  AAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQT 429
            AAQNA               + L+E  D +A   D      G ++  NP+++    T+  
Sbjct: 695  AAQNA--------------SNALKETQD-KARKFDEEDEEDGELNFQNPTSLGEI-TIDQ 738

Query: 430  PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPF 489
            P++   +LKEYQLKGL WL N Y+QG+NGILADEMGLGKT+Q+++ LAHLA+  NIWGPF
Sbjct: 739  PKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPF 798

Query: 490  LVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILIT 548
            +VV PAS L+NW +EISRF P  K LPYWG   +R  LRK  + K L Y RDA FH+++T
Sbjct: 799  IVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVT 858

Query: 549  SYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMA 608
            SYQ++V+D  Y +++KWQYM+LDEAQAIKSS S RWKTLLSF+CRNRLLLTGTPIQNNM 
Sbjct: 859  SYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQ 918

Query: 609  ELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKK 668
            ELWALLHFIMP+LFDSH++F++WFSK IESHAE    LN+ QL RLH +LKPFMLRR+KK
Sbjct: 919  ELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKK 978

Query: 669  DVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFD---NSRGHLNEKKILNLMNI 725
            +V SEL  K E+ V C L+ RQ   YQ +K+++S  G +D   N+ G+ +      L+N+
Sbjct: 979  NVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVS--GGYDAIENAAGNDDVTSDQKLVNL 1036

Query: 726  VIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIV 785
            V++ RKVCNHP+LFER +  S   F     S      G+  ++++S  +N I Y +P+++
Sbjct: 1037 VMEFRKVCNHPDLFERADVMSPFSFVSFGESASLSREGDFVEVNYSA-KNLINYNLPRLI 1095

Query: 786  HQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKSETF--- 842
            + E++    +        +  +L     NIF   N +Q  F L+  +D SP K  T    
Sbjct: 1096 YDELV----VPNYNNDVDVRAKLLYHTMNIFHPANSFQLCFILSKLTDTSPNKFATLLEQ 1151

Query: 843  -GFTHLMDLSPAEVAFLAKGSFM----ERLLFAMLRWDRQFLDGILDVFMEAMDGELNEN 897
                  +DL        AK S      E++  + L  + +     L +   +  G + +N
Sbjct: 1152 NVINRAIDLQNDGYFNTAKYSIAYDEGEKIFSSNLLINDKL--KYLHLLKNSTSGSVLKN 1209

Query: 898  HPDRGKVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKLLNATY 957
                        LL IPS    N      +I P Y P                       
Sbjct: 1210 ------------LLEIPSSVYENEYFN--SISPAYHPA---------------------- 1233

Query: 958  TFIPQAQAPPINVQC-SDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLI 1016
                 A APPIN+   +  NF  +   E  +P +   L     + +          H+LI
Sbjct: 1234 -----ASAPPINIDVLASNNFVQKKQYEMFNPSISSALSSIPSSVQ----------HKLI 1278

Query: 1017 QEID---SELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENH 1073
             E      ELPV + A +     F S   M S D  + +T+S KL+ LD LL +L+ E+H
Sbjct: 1279 VEKGIPIEELPVTEMAPKAFNNSFTSYIEMPSMD--RFITESAKLKKLDELLVKLKEEDH 1336

Query: 1074 RVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRA 1133
            RVL++ QMTKM++++E+Y+ YR+Y ++RLDGSS + DRRD+V D+Q + DIF+FLLSTRA
Sbjct: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396

Query: 1134 GGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRA 1193
            GGLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLGQT+ VTVYRL+ + T+EE++  RA
Sbjct: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456

Query: 1194 SQKNTVQQLVMTG 1206
             QK  VQQ+VM G
Sbjct: 1457 KQKEHVQQVVMEG 1469


>sp|P0CO16|INO80_CRYNJ Putative DNA helicase INO80 OS=Cryptococcus neoformans var.
            neoformans serotype D (strain JEC21 / ATCC MYA-565)
            GN=INO80 PE=3 SV=1
          Length = 1765

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/1102 (40%), Positives = 624/1102 (56%), Gaps = 132/1102 (11%)

Query: 182  VKKDPSVIEKEEMEKIGK-VWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETC------ 234
            V ++ + I  E +E + K  W NIVR D+P+ ++ F  + +  +  A+R A+ C      
Sbjct: 610  VSENEAKIRHELVEDLQKQAWSNIVR-DVPRIYRVFQGYDQSMKQIAQRRAQACVRNAFG 668

Query: 235  QREVKMKVSRSLKLMRGAAIRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALKREQE 294
            QR  K    +S K+ +  A + +++ +++  FW++ +K+    RK+ EREA E  K E+E
Sbjct: 669  QRNQKTMQRQSGKVNKEGAAKAKRIVKELAAFWRKNEKDEVIARKKAEREALERAKAEEE 728

Query: 295  LREAKRQQQRLNFLIQQTELYSHFMQNK---SSSQPSEVLPVGNDKPNDQELLLSSSEFE 351
             RE KRQ ++LNFL+ QTELYSHF+  K     ++ +E + V  ++    E +    + E
Sbjct: 729  ARETKRQSRKLNFLLTQTELYSHFIGKKIKTKEAEAAEGMDVEEEEKRGMEEIAIGEDGE 788

Query: 352  P---GEEEDPEEAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVA 408
            P    + ++ +E  L+K A + AQ A+                  +AA  +A   D S+ 
Sbjct: 789  PLPDLDYDEDDEENLRKHAARGAQAAI------------------QAARDKARAFDDSIV 830

Query: 409  GSG------------NIDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGL 456
            G G             ++  NPS    + T+  P++    LKEYQLKGL WL N YEQG+
Sbjct: 831  GRGAPLPGDDTMDGDELNFQNPSLGENSVTITQPKMLMAQLKEYQLKGLTWLGNLYEQGI 890

Query: 457  NGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLP 516
            NGILADEMGLGKTIQ+++ LA+LAE  N+WGPFLV+APAS L+NW  E++RF P LK LP
Sbjct: 891  NGILADEMGLGKTIQSISLLAYLAEHHNLWGPFLVIAPASTLHNWQQELARFVPRLKALP 950

Query: 517  YWGGLQERMVLRKNINPK-RLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQA 575
            YWG  ++R  LRK  + K + +  D+ FHILITSYQL V DEKY + +KWQYM+LDEAQA
Sbjct: 951  YWGSPKDRETLRKIWSRKNQTFSEDSPFHILITSYQLAVQDEKYLQGMKWQYMILDEAQA 1010

Query: 576  IKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKG 635
            IKSS+S RWK+LLS +CRNRLLLTGTPIQN+M ELWALLHFIMP LFDSHE+F EWFSK 
Sbjct: 1011 IKSSSSARWKSLLSLHCRNRLLLTGTPIQNSMHELWALLHFIMPQLFDSHEEFAEWFSKD 1070

Query: 636  IESHAEH-GGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFY 694
            IES +    G L   QL RLH ILKPFMLRRVKK V  EL  K E+ +   LS RQ+  Y
Sbjct: 1071 IESSSGGVTGNLKPEQLKRLHMILKPFMLRRVKKHVQKELGDKIEIDLLVDLSQRQREIY 1130

Query: 695  QAIKNKISLAGLF---DNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
            +A++ ++S+  L    +N+  + N K + +L+N+V+Q RKVCNHP+LFER +  S   FG
Sbjct: 1131 KALRQRVSITDLLATAENNTDNGNPKNMRSLVNLVMQFRKVCNHPDLFERADVVSPFVFG 1190

Query: 752  EIPNSLLPPPFGELEDISFSG--------VRNPIEYKIPKIVHQEILQSSEILCSAVGHG 803
            E         F +  +++  G         RN IE +IP+I+  +  +  +I       G
Sbjct: 1191 E---------FSQSGNLAREGDGMYLPDSARNAIEVQIPRILWTDGGK-LDIPGEQSLAG 1240

Query: 804  ISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSF 863
               ++ Q   NI++ E +          ++ +      FGF  L+  SP E +  AK   
Sbjct: 1241 SDTKILQNLLNIWTPEWI----------NERTKCADAEFGFVKLVGSSPGETSRSAKSPV 1290

Query: 864  MERLLFAM---LRW--DRQFLDGILDVFMEAMDGELNENHPDRGKVRAVTRLLLIPSRSE 918
            + +LL       RW  + +F+D          D E   +     +V +V  +L  P +  
Sbjct: 1291 LVQLLEGAEKERRWTEEGRFVD----------DSEFAASVKKGFRVPSVIPVLTQPGQVS 1340

Query: 919  TNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKLLNATYTFIPQAQAPPINVQCSDRNFT 978
               + R+      +D  E  +     R + +  +            AP +    S+R+F 
Sbjct: 1341 LREISRRV-----WD--ESYLSRDDARCIGDYAI------------APIVKPIASNRSFL 1381

Query: 979  YRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSE-LPVAKPALQLTYQIF 1037
                   + P     L G A             P +L   + +E      P++ LT  I 
Sbjct: 1382 NAQDRILNQPLAHSTLYGLA-------------PSELHDPLAAEQFSRIAPSVPLTGLIP 1428

Query: 1038 GSCPPMQSFDP------AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDY 1091
             S        P       +L+ DS KL  LD LL+ L+A  HRVLL+ QMTKM++++E+Y
Sbjct: 1429 SSASSQTPVSPLHIPPTKRLIVDSAKLARLDSLLRELKAGGHRVLLYFQMTKMMDLIEEY 1488

Query: 1092 MNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
            + +R+Y+YLRLDGSS I +RRDMV  +Q   DIFVF LSTRAGGLGINLTAADTVIFY+ 
Sbjct: 1489 LIFRQYKYLRLDGSSPIAERRDMVTSWQTNPDIFVFCLSTRAGGLGINLTAADTVIFYDH 1548

Query: 1152 DWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQG 1211
            DWNP+ D QAMDRAHR+GQTK VTVYRL+ + T+EE+ILQ A  K  +Q +V+ G     
Sbjct: 1549 DWNPSSDAQAMDRAHRVGQTKQVTVYRLVARGTIEERILQMARGKKDIQDVVV-GTKSVS 1607

Query: 1212 DILAPEDVVSLLLDDAQLEQKL 1233
            D+  P ++VSL +DD +L + +
Sbjct: 1608 DVAKPSEIVSLFMDDEELAESV 1629


>sp|P0CO17|INO80_CRYNB Putative DNA helicase INO80 OS=Cryptococcus neoformans var.
            neoformans serotype D (strain B-3501A) GN=INO80 PE=3 SV=1
          Length = 1765

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/1102 (40%), Positives = 624/1102 (56%), Gaps = 132/1102 (11%)

Query: 182  VKKDPSVIEKEEMEKIGK-VWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETC------ 234
            V ++ + I  E +E + K  W NIVR D+P+ ++ F  + +  +  A+R A+ C      
Sbjct: 610  VSENEAKIRHELVEDLQKQAWSNIVR-DVPRIYRVFQGYDQSMKQIAQRRAQACVRNAFG 668

Query: 235  QREVKMKVSRSLKLMRGAAIRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALKREQE 294
            QR  K    +S K+ +  A + +++ +++  FW++ +K+    RK+ EREA E  K E+E
Sbjct: 669  QRNQKTMQRQSGKVNKEGAAKAKRIVKELAAFWRKNEKDEVIARKKAEREALERAKAEEE 728

Query: 295  LREAKRQQQRLNFLIQQTELYSHFMQNK---SSSQPSEVLPVGNDKPNDQELLLSSSEFE 351
             RE KRQ ++LNFL+ QTELYSHF+  K     ++ +E + V  ++    E +    + E
Sbjct: 729  ARETKRQSRKLNFLLTQTELYSHFIGKKIKTKEAEAAEGMDVEEEEKRGMEEIAIGEDGE 788

Query: 352  P---GEEEDPEEAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVA 408
            P    + ++ +E  L+K A + AQ A+                  +AA  +A   D S+ 
Sbjct: 789  PLPDLDYDEDDEENLRKHAARGAQAAI------------------QAARDKARAFDDSIV 830

Query: 409  GSG------------NIDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGL 456
            G G             ++  NPS    + T+  P++    LKEYQLKGL WL N YEQG+
Sbjct: 831  GRGAPLPGDDTMDGDELNFQNPSLGENSVTITQPKMLMAQLKEYQLKGLTWLGNLYEQGI 890

Query: 457  NGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLP 516
            NGILADEMGLGKTIQ+++ LA+LAE  N+WGPFLV+APAS L+NW  E++RF P LK LP
Sbjct: 891  NGILADEMGLGKTIQSISLLAYLAEHHNLWGPFLVIAPASTLHNWQQELARFVPRLKALP 950

Query: 517  YWGGLQERMVLRKNINPK-RLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQA 575
            YWG  ++R  LRK  + K + +  D+ FHILITSYQL V DEKY + +KWQYM+LDEAQA
Sbjct: 951  YWGSPKDRETLRKIWSRKNQTFSEDSPFHILITSYQLAVQDEKYLQGMKWQYMILDEAQA 1010

Query: 576  IKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKG 635
            IKSS+S RWK+LLS +CRNRLLLTGTPIQN+M ELWALLHFIMP LFDSHE+F EWFSK 
Sbjct: 1011 IKSSSSARWKSLLSLHCRNRLLLTGTPIQNSMHELWALLHFIMPQLFDSHEEFAEWFSKD 1070

Query: 636  IESHAEH-GGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFY 694
            IES +    G L   QL RLH ILKPFMLRRVKK V  EL  K E+ +   LS RQ+  Y
Sbjct: 1071 IESSSGGVTGNLKPEQLKRLHMILKPFMLRRVKKHVQKELGDKIEIDLLVDLSQRQREIY 1130

Query: 695  QAIKNKISLAGLF---DNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 751
            +A++ ++S+  L    +N+  + N K + +L+N+V+Q RKVCNHP+LFER +  S   FG
Sbjct: 1131 KALRQRVSITDLLATAENNTDNGNPKNMRSLVNLVMQFRKVCNHPDLFERADVVSPFVFG 1190

Query: 752  EIPNSLLPPPFGELEDISFSG--------VRNPIEYKIPKIVHQEILQSSEILCSAVGHG 803
            E         F +  +++  G         RN IE +IP+I+  +  +  +I       G
Sbjct: 1191 E---------FSQSGNLAREGDGMYLPDSARNAIEVQIPRILWTDGGK-LDIPGEQSLAG 1240

Query: 804  ISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSF 863
               ++ Q   NI++ E +          ++ +      FGF  L+  SP E +  AK   
Sbjct: 1241 SDTKILQNLLNIWTPEWI----------NERTKCADAEFGFVKLVGSSPGETSRSAKSPV 1290

Query: 864  MERLLFAM---LRW--DRQFLDGILDVFMEAMDGELNENHPDRGKVRAVTRLLLIPSRSE 918
            + +LL       RW  + +F+D          D E   +     +V +V  +L  P +  
Sbjct: 1291 LVQLLEGAEKERRWTEEGRFVD----------DSEFAASVKKGFRVPSVIPVLTQPGQVS 1340

Query: 919  TNLLRRKFTIGPGYDPCEDLVVSHQERLLSNIKLLNATYTFIPQAQAPPINVQCSDRNFT 978
               + R+      +D  E  +     R + +  +            AP +    S+R+F 
Sbjct: 1341 LREISRRV-----WD--ESYLSRDDARCIGDYAI------------APIVKPIASNRSFL 1381

Query: 979  YRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSE-LPVAKPALQLTYQIF 1037
                   + P     L G A             P +L   + +E      P++ LT  I 
Sbjct: 1382 NAQDRILNQPLAHSTLYGLA-------------PSELHDPLAAEQFSRIAPSVPLTGLIP 1428

Query: 1038 GSCPPMQSFDP------AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDY 1091
             S        P       +L+ DS KL  LD LL+ L+A  HRVLL+ QMTKM++++E+Y
Sbjct: 1429 SSASSQTPVSPLHIPPTKRLIVDSAKLARLDSLLRELKAGGHRVLLYFQMTKMMDLIEEY 1488

Query: 1092 MNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYES 1151
            + +R+Y+YLRLDGSS I +RRDMV  +Q   DIFVF LSTRAGGLGINLTAADTVIFY+ 
Sbjct: 1489 LIFRQYKYLRLDGSSPIAERRDMVTSWQTNPDIFVFCLSTRAGGLGINLTAADTVIFYDH 1548

Query: 1152 DWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQG 1211
            DWNP+ D QAMDRAHR+GQTK VTVYRL+ + T+EE+ILQ A  K  +Q +V+ G     
Sbjct: 1549 DWNPSSDAQAMDRAHRVGQTKQVTVYRLVARGTIEERILQMARGKKDIQDVVV-GTKSVS 1607

Query: 1212 DILAPEDVVSLLLDDAQLEQKL 1233
            D+  P ++VSL +DD +L + +
Sbjct: 1608 DVAKPSEIVSLFMDDEELAESV 1629


>sp|Q74Z27|INO80_ASHGO Putative DNA helicase INO80 OS=Ashbya gossypii (strain ATCC 10895 /
            CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=INO80 PE=3 SV=2
          Length = 1414

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/1047 (40%), Positives = 614/1047 (58%), Gaps = 111/1047 (10%)

Query: 200  VWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRKL 259
            VW ++ RKD  K  +        +  + K+ +    RE +   SR+ + ++    R R+ 
Sbjct: 429  VWKDMARKDSAKLSRLVQQIQSIRSANFKKTSSLVAREARKWQSRNFRQVKDFQTRARRG 488

Query: 260  ARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHFM 319
             R+M  FWK+ ++E  E++KR EREA E  K+E+E RE+KRQ ++LNFL+ QTELYSHF+
Sbjct: 489  VREMSSFWKKNEREERELKKRAEREAIEQAKKEEEERESKRQARKLNFLLTQTELYSHFI 548

Query: 320  QNKSSSQPSE-------------VLPVGNDKPNDQELLLSSSEFEPGEEEDPEEAELKKE 366
             +K  +   E             V  +   KP  ++  + + +F+  ++E     EL ++
Sbjct: 549  GSKIKTNELEGNMADSNLATAPDVSAIDLSKPPTRKNEVHTIDFDNEDDE-----ELHRK 603

Query: 367  ALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTST 426
            A + A NA+ + +     FD        + D E             ++  NP+++    T
Sbjct: 604  AAQNASNALKETREKAKAFDGM------SGDDE------------ELNFQNPTSLGEI-T 644

Query: 427  VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
            ++ P++   +LKEYQLKGL WL N Y+QG+NGILADEMGLGKT+Q+++ LAHLAE  NIW
Sbjct: 645  IEQPKILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAERYNIW 704

Query: 487  GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHI 545
            GPF+VV PAS L+NW +EI +F PD K LPYWG   +R +LR+  + K L Y +DA FH+
Sbjct: 705  GPFIVVTPASTLHNWVNEIQKFVPDFKILPYWGNGNDRKILRRFWDRKHLRYSKDAPFHV 764

Query: 546  LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQN 605
            +ITSYQ++V+D  Y +++KWQYM+LDEAQAIKSS S RWK LLSF+CRNRLLLTGTPIQN
Sbjct: 765  MITSYQMIVSDAAYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQN 824

Query: 606  NMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRR 665
            +M ELWALLHFIMP+LFDSH++FN+WFSK IESHA+    LN+ QL RLH ILKPFMLRR
Sbjct: 825  SMQELWALLHFIMPSLFDSHDEFNDWFSKDIESHAQSNTQLNQQQLRRLHMILKPFMLRR 884

Query: 666  VKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKIS-----LAGLFDNSRG------HL 714
            +KK+V SEL  K E+ V C L+ RQ   YQ +K+++S     +     NS G       L
Sbjct: 885  IKKNVQSELGDKIEIDVMCDLTHRQAKLYQVLKSQVSASYDAIENAASNSSGDDSGNMSL 944

Query: 715  NEKKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVR 774
            ++ KI   MN V++ RKVCNHP+LFER + SS   F     +      G++ D+ +S  +
Sbjct: 945  SDSKI---MNTVMEFRKVCNHPDLFERADVSSPFSFTSFGQTGSIMREGDVIDVQYSS-K 1000

Query: 775  NPIEYKIPKIVHQEIL-----QSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLA 829
            NP+ + +P++++ +++       S++    + H +                   SIF+ A
Sbjct: 1001 NPVSFHLPRLIYDDLILPNYNHDSDMRTKILNHMM-------------------SIFAPA 1041

Query: 830  SGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEA 889
            +  D     S+  G      + P  +  L++   ++R +            GI  V  E 
Sbjct: 1042 NSPDLCATLSKVAG------VEPNSILRLSQEHIVKRAIDLSAHSPNVTRSGIFSVVYE- 1094

Query: 890  MDGELNENHPDRGKVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLVVSHQERLLSN 949
                      D+  + ++ + LLI  +S+      + T         ++  +  E    N
Sbjct: 1095 ---------DDKSSLSSLDKTLLINDKSDYLHTIARTTQNGVLASLLNIQGNFYENEYMN 1145

Query: 950  IKLLNATYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKP 1009
            +  L   Y     A    I+V  S  NF+ +      +P++ R L G       I P   
Sbjct: 1146 V--LRPAYRPAAAAPPISIHVMGSS-NFSIKRDNALFEPYITRSL-GI------IPPELQ 1195

Query: 1010 GGPHQLIQEIDSELPVAK--PA-LQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLK 1066
                +    I + LP+++  PA L  ++  + S P M  F     +T+S KL+ LD LL 
Sbjct: 1196 TRLTEKENNIFTALPISELYPAPLNKSFSSYISMPSMDRF-----ITESAKLKKLDELLV 1250

Query: 1067 RLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFV 1126
            RL+A  HRVL++ QMT+M++++E+Y+ YR+Y+++RLDGSS + DRRD+V D+Q +SDIF+
Sbjct: 1251 RLKAGEHRVLIYFQMTRMMDLIEEYLTYRQYKHIRLDGSSKLEDRRDLVHDWQTKSDIFI 1310

Query: 1127 FLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVE 1186
            FLLSTRAGGLGINLT+ADTVIFY+SDWNPT+D QAMDRAHRLGQTK VTVYRL+ K T+E
Sbjct: 1311 FLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLLIKGTIE 1370

Query: 1187 EKILQRASQKNTVQQLVMTGGHVQGDI 1213
            E++  RA QK  VQQ+VM G   + ++
Sbjct: 1371 ERMRDRAKQKEHVQQVVMEGKTKENNV 1397


>sp|A5E0W5|INO80_LODEL Putative DNA helicase ino80 OS=Lodderomyces elongisporus (strain ATCC
            11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)
            GN=INO80 PE=3 SV=1
          Length = 1575

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/1049 (40%), Positives = 612/1049 (58%), Gaps = 134/1049 (12%)

Query: 200  VWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRKL 259
            +W ++ RKD PK  +      + + I+ K+      RE K    ++ K  +  + + R+ 
Sbjct: 505  IWKDMSRKDGPKVSRLMQQSTQAKLINLKKTCILAAREAKRWQVKNTKNQKDLSTKARRA 564

Query: 260  ARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHFM 319
             R+M  FWKR ++   E++K+ E+E  E  KRE+E RE+KRQ ++LNFLI QTELYSHF+
Sbjct: 565  MREMFNFWKRNERIERELKKKHEKELVEKAKREEEERESKRQSRKLNFLITQTELYSHFI 624

Query: 320  QNKSSSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDP-----EEAELKKEA-LKAAQN 373
              K                      + + E E G + DP     E+A L K A + AA N
Sbjct: 625  GKK----------------------IKTDEIE-GTDADPRIKAQEKAHLDKYAGVDAANN 661

Query: 374  AVSKQKMLTNTFDTE--------------------CSKLREAADTEAAMLDVSVAGSGNI 413
             +     L   FD +                     ++ ++  DTE             +
Sbjct: 662  DI-----LAIDFDNDDEDALHRAAAQNAQNALANAQNQAKQFDDTEP--FKNPDTNGEEM 714

Query: 414  DLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAM 473
            +  NP+ +   S ++ P++ K +LKEYQ+KGL WL N YEQG+NGILADEMGLGKT+Q++
Sbjct: 715  NFQNPTLLGDLS-IEQPKMLKCTLKEYQIKGLNWLANLYEQGINGILADEMGLGKTVQSI 773

Query: 474  AFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINP 533
            + L++LAE  NIWGPFLVV PAS L+NW  EIS+F P+ K LPYWG  ++R VLRK  + 
Sbjct: 774  SVLSYLAETHNIWGPFLVVTPASTLHNWQQEISKFVPNFKVLPYWGHAKDRKVLRKFWDR 833

Query: 534  KRL-YRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNC 592
            K L Y +DA FH+L+TSYQL+V+D  YF+++KWQYM+LDEAQAIKSS S RWK+LLS +C
Sbjct: 834  KSLRYDKDAPFHVLVTSYQLIVSDIAYFQKMKWQYMILDEAQAIKSSQSSRWKSLLSLSC 893

Query: 593  RNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLN 652
            RNRLLLTGTPIQN+M ELWALLHFIMPTLFDSH++F++WFSK IESHA+    L+E QL 
Sbjct: 894  RNRLLLTGTPIQNSMQELWALLHFIMPTLFDSHDEFSDWFSKDIESHAQSNTGLDEQQLR 953

Query: 653  RLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFD---- 708
            RLH ILKPFMLRR+KK+V SEL  K E+ + C L++RQ+ +YQ+++++IS+  L D    
Sbjct: 954  RLHMILKPFMLRRIKKNVQSELGDKVEIDLFCDLTNRQKKYYQSLRSQISIMDLIDATTT 1013

Query: 709  ---NSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSS---YLYFGEIPNSLLPPPF 762
               ++   L++    +L+N+V+Q RKVCNHP+LFER +  S    + F E  + L     
Sbjct: 1014 NSSSNNSSLDDSSTTSLVNLVMQFRKVCNHPDLFERADVRSPMALVKFAETGSFLRE--- 1070

Query: 763  GELEDISFSGVRNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVY 822
            G   D+S++   N I Y +P++++ +++ ++E                        +N +
Sbjct: 1071 GNDLDVSYAS-ENLINYNLPRLIYDDLISANE-----------------------NKNDF 1106

Query: 823  QSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGI 882
             S+++  S  D  P      G+      SP E+  L K + +ER     ++  R      
Sbjct: 1107 GSVYAKFSVYD--PENLRDLGWISSAGTSPNEIQQLGKMNVLER----AIKLQRYTTGSP 1160

Query: 883  LDVFMEAMDGELNENHPDRGKVRAVTRLLLIPSRSETNLLRRKFTIGPGYDPCEDLVVSH 942
            LD      +G+ +   P+       ++LL+ P        ++        D C     + 
Sbjct: 1161 LDRINYLYEGDYSS--PN-------SKLLINPQNQHMISQQQIENSSVLLDLC-----NI 1206

Query: 943  QERLLSNIKLLNATYTFIPQAQAPPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSE 1002
             +++   + L      F P A APPI + CS  NF  ++  E  +P ++  L   +   E
Sbjct: 1207 SQKVYEEMYLNTQDPAFTPLASAPPITIVCSSNNFQNKLQNELFNPTIRSALAPMSLNKE 1266

Query: 1003 -----NIGPRKPGGPHQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGK 1057
                 N  P +   P  +       LP +   +     I    P M  F     +T+SGK
Sbjct: 1267 LEFMNNNTPLELYPPSNM-------LPSSLSKVNDYSNI--RMPSMDRF-----ITESGK 1312

Query: 1058 LQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRD 1117
            L  LD LL +L+ E+HRVL++ QMTKM++++E+Y+ +++++Y+RLDGSS + DRRD+V D
Sbjct: 1313 LAKLDELLVKLKQEDHRVLIYFQMTKMMDLMEEYLTFKQHKYIRLDGSSKLDDRRDLVHD 1372

Query: 1118 FQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVY 1177
            +Q + +IFVFLLSTRAGGLGINLTAADTV+FY+SDWNPT+D QAMDRAHRLGQT+ VTVY
Sbjct: 1373 WQTKPEIFVFLLSTRAGGLGINLTAADTVVFYDSDWNPTIDSQAMDRAHRLGQTRQVTVY 1432

Query: 1178 RLICKETVEEKILQRASQKNTVQQLVMTG 1206
            RL+ + T+EE++  RA QK  VQQ+VM G
Sbjct: 1433 RLLTRNTIEERMRDRAKQKEQVQQVVMEG 1461


>sp|Q59KI4|INO80_CANAL Putative DNA helicase INO80 OS=Candida albicans (strain SC5314 / ATCC
            MYA-2876) GN=INO80 PE=3 SV=1
          Length = 1387

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/1027 (39%), Positives = 609/1027 (59%), Gaps = 102/1027 (9%)

Query: 200  VWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRKL 259
            +W ++ RKD PK  ++     + + I+ ++ A    RE K    ++ K  +    + R+ 
Sbjct: 438  IWKDLSRKDGPKGSRSMQQATQGRLINLRKTALLAAREAKRWQLKNTKNQKDLTTKARRA 497

Query: 260  ARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHFM 319
             R+M  FWKR ++   +++K+ E+E  +  K+E+E REAKRQ ++LNFLI QTELYSHF+
Sbjct: 498  MREMFNFWKRNERLERDLKKKHEKELLDKAKKEEEEREAKRQSRKLNFLITQTELYSHFI 557

Query: 320  QNKSSSQPSEVLPVGND-KPNDQELLLSSSEFEPGEEED--------PEEAELKKEALKA 370
              K  +   E     ++ K N +E L   ++ +     D         +E  L++ A + 
Sbjct: 558  GKKIKTDELEGTNADDNLKSNTKEHLDKYADVDGSATHDINAVDFDNDDEEALRRMAAQN 617

Query: 371  AQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTP 430
            AQNA+ + +     FD          ++E +  +    G   ++  NP T+    T+  P
Sbjct: 618  AQNALIEVQNKAKQFD----------NSEESFKNPDTNGE-EMNFQNP-TLLGDITIPQP 665

Query: 431  ELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFL 490
             + K +LKEYQLKGL WL N YEQG+NGILADEMGLGKT+Q+++ LA+LAE  N+WGPFL
Sbjct: 666  NMLKCTLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAYLAETYNMWGPFL 725

Query: 491  VVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILITS 549
            VV PAS L+NW  EI++F P+ K LPYWG  ++R +LRK  + K L Y +D+ FH+L+TS
Sbjct: 726  VVTPASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILRKFWDRKSLRYDKDSPFHVLVTS 785

Query: 550  YQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAE 609
            YQL+VAD  YF+++KWQYM+LDEAQAIKSS+S RWK+LL+  CRNRLLLTGTPIQN+M E
Sbjct: 786  YQLIVADIAYFQKMKWQYMILDEAQAIKSSSSSRWKSLLNLTCRNRLLLTGTPIQNSMQE 845

Query: 610  LWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKD 669
            LWALLHFIMP++FDSH++F++WF+K IESHA+   +L+E QL RLH ILKPFMLRR+KK+
Sbjct: 846  LWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQLRRLHMILKPFMLRRIKKN 905

Query: 670  VISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQL 729
            V SEL  K E+ V+C L++RQ+  YQ ++++IS++          +     +L N+V+Q 
Sbjct: 906  VQSELGDKVEIDVYCDLTTRQKKLYQQLRSQISMSDTDLLELESNSTSSDSSLANLVMQF 965

Query: 730  RKVCNHPELFERNEGSSYLYFGEIP--NSLLPPPFGELEDISFSGVRNPIEYKIPKIVHQ 787
            RKVCNHP+LFER + +S   FG+     S L     EL D+++S   N ++Y +P++++ 
Sbjct: 966  RKVCNHPDLFERADVNSPFSFGKFAETGSFLRET-NEL-DVNYS-TENIVQYDLPRLIYD 1022

Query: 788  EILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKSETFGFTHL 847
            E+L  +        +  +R+    +F+I++ EN+  +                  G+   
Sbjct: 1023 ELLTPNY-------NKSTRDSIYSKFSIYNPENMNAT------------------GWLQG 1057

Query: 848  MDLSPAEVAFLAKGSFMERLLFAMLRWDRQFLDGILDVFMEAMDGELNENHPDRGKVRAV 907
            +++SP E+   ++   + R   A+   ++      L+      +G+          +   
Sbjct: 1058 INVSPNELKHYSQKDILSR---AIEMQNKPTETEKLERINYLYEGDY---------IPKN 1105

Query: 908  TRLLLIPSRSETN--LLRRKFTIGPGYDPCEDLVVSHQERLLSNIKLLNATYTFIPQAQA 965
             +LL+    + TN   +                +VS +E++  ++ L        P A A
Sbjct: 1106 KKLLITDHSTSTNSSFISNSLVFSD--------LVSIKEKVSQDMYLNKLEPAVTPIASA 1157

Query: 966  PPINVQCSDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQEIDSELPV 1025
            PPI V CS  NFT +M     D  ++  LI  +                    + +EL +
Sbjct: 1158 PPITVNCSSMNFTNKMNNTLFDSNIRSSLIPLS--------------------LSTELKL 1197

Query: 1026 AKPALQLTYQIFGSCPPMQSFDPA--------KLLTDSGKLQTLDILLKRLRAENHRVLL 1077
             K  + L      +  PM  FD +        + + +SGKL  LD LL  L+   HR+L+
Sbjct: 1198 MKDQIPLEQYPKSNMLPMPIFDYSNIRMPSMDRFIAESGKLAKLDELLIDLKRGGHRILI 1257

Query: 1078 FAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLG 1137
            + QMT+M+ I E+Y+ Y+ Y+Y+RLDGS+TI  RR+MV+ +Q   +IF+F+LSTRAGGLG
Sbjct: 1258 YFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREMVQAWQTNPEIFIFMLSTRAGGLG 1317

Query: 1138 INLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKN 1197
            +NLT+ADTVIFY+SDWNPT+D QAMDRAHR+GQTK V V+RL+ + T+E+KIL+RA +K 
Sbjct: 1318 LNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQVKVFRLVTRNTIEQKILERAKEKE 1377

Query: 1198 TVQQLVM 1204
             +Q+LV+
Sbjct: 1378 EIQKLVV 1384


>sp|Q4PGL2|INO80_USTMA Putative DNA helicase INO80 OS=Ustilago maydis (strain 521 / FGSC
            9021) GN=INO80 PE=3 SV=1
          Length = 1910

 Score =  597 bits (1539), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 327/715 (45%), Positives = 454/715 (63%), Gaps = 63/715 (8%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            ++W  I ++D+PK ++T       + +  +R +   QRE K   +R+ K ++   +R RK
Sbjct: 725  RIWTTIAKRDVPKVYRTVLQSASSKTMYWRRISSVVQREAKRGAARNNKTVKDVQLRARK 784

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
            + R++L+FWKR +KE  E+RK+ EREA E  K+E+E+REAKRQ ++LNFLI QTELYSHF
Sbjct: 785  VMREVLVFWKRNEKEERELRKKAEREALEKAKKEEEMREAKRQARKLNFLISQTELYSHF 844

Query: 319  MQNK--------------------SSSQPSE--VLPVG-NDKPNDQELLLSSSEFEPGEE 355
            + +K                     ++QPS+  VLP+  + +  D E  L+  +    ++
Sbjct: 845  VGSKLKTAEAEESEETAGSSKIIDPNAQPSDATVLPINPHSELADAEARLAELDDIDFDD 904

Query: 356  EDPEEAELKKEALKAAQNAVSKQKMLTNTFDTECSKLR---EAADTEAAMLDVS------ 406
            E  +E+ L+  A + AQ AV   K     FD   ++ R   EAA  E   LD        
Sbjct: 905  E--DESNLRAHAARNAQEAVRLAKEKAQAFDVAAAEERRRNEAAAREREGLDAGPVKQIE 962

Query: 407  ------VAGSGNIDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGIL 460
                     S +++  NP++M  T  ++ P++    LKEYQLKGL WL N YEQG+NGIL
Sbjct: 963  EKDLGKAFDSDDMNFLNPTSMGQTE-IKQPKMLTCQLKEYQLKGLNWLANLYEQGINGIL 1021

Query: 461  ADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGG 520
            ADEMGLGKT+Q+++ +A+LAE  +IWGPFLV+APAS L+NW  EIS+F P LK LPYWG 
Sbjct: 1022 ADEMGLGKTVQSISLMAYLAEVHDIWGPFLVIAPASTLHNWQQEISKFVPTLKALPYWGN 1081

Query: 521  LQERMVLRKNINPKRL-YRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSS 579
            +++R VLRK  N K++ Y RDA FH+L+TSYQL+V+DEKYF+RVKWQYM+LDEAQAIKSS
Sbjct: 1082 VKDRAVLRKFWNRKQISYNRDAPFHVLVTSYQLVVSDEKYFQRVKWQYMILDEAQAIKSS 1141

Query: 580  NSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESH 639
            +SIRWKTLL FNCRNRLLLTGTP+QN+M ELWALLHFIMP+LFDSH++F+EWFSK IESH
Sbjct: 1142 SSIRWKTLLGFNCRNRLLLTGTPVQNSMQELWALLHFIMPSLFDSHDEFSEWFSKDIESH 1201

Query: 640  AEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKN 699
            AE  GTLNEHQL RLH ILKPFMLRR+KK+V +EL  K E+ V C LS+RQ+  Y+ ++ 
Sbjct: 1202 AEQKGTLNEHQLRRLHMILKPFMLRRIKKNVQNELGDKIEIDVFCDLSARQKMLYRGLRA 1261

Query: 700  KISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLP 759
             IS+A L D +  + +E  + +LMN+V+Q RKVCNHPELFER +  +     +   S   
Sbjct: 1262 NISVAELMDRATSN-DEAGLKSLMNLVMQFRKVCNHPELFERADVRAPFALADFARSGSL 1320

Query: 760  PPFGELEDISFSGVRNPIEYKIPKIVHQEILQSSEILCSAVGH----GISRELFQKRFNI 815
               G+L ++  S   + IE ++PK++ +E       +    GH    G      Q  FNI
Sbjct: 1321 AREGDLLNLPDSTT-SLIELQVPKLLVRE-----GGIFDIPGHNSRKGFDTGYLQNLFNI 1374

Query: 816  FSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSPAEVAFLAKGSFMERLLFA 870
            + A ++++S+    S          TF    L+ +SP+E       + ++R+L A
Sbjct: 1375 WRAPHIHESLQEERS----------TFASLPLIGVSPSEAQKTFHSTGIKRILAA 1419



 Score =  241 bits (614), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 118/221 (53%), Positives = 161/221 (72%), Gaps = 3/221 (1%)

Query: 1016 IQEIDSELPVAKPALQLTYQIFGSCP--PMQSFDPAKLLTDSGKLQTLDILLKRLRAENH 1073
            ++E+ SELP   P   +        P   MQ     KL+ DS KL  LD+LL+ L+A  H
Sbjct: 1537 VEELQSELPEVPPQGVMRDSSIDQLPYNGMQVPQMNKLIVDSSKLAKLDVLLRELKANGH 1596

Query: 1074 RVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRA 1133
            RVL++ QMT+M++++E+Y+ YR+Y+YLRLDG+S I DRRDMV D+Q + ++F+FLLSTRA
Sbjct: 1597 RVLIYFQMTRMIDLMEEYLIYRQYKYLRLDGASKISDRRDMVTDWQTKPELFIFLLSTRA 1656

Query: 1134 GGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRA 1193
            GGLGINLTAADTVIFY+ DWNP+ D QAMDRAHRLGQTK VTVYRLI K T++E+I++ A
Sbjct: 1657 GGLGINLTAADTVIFYDHDWNPSNDSQAMDRAHRLGQTKQVTVYRLITKGTIDERIVRLA 1716

Query: 1194 SQKNTVQQLVM-TGGHVQGDILAPEDVVSLLLDDAQLEQKL 1233
              K  VQ +V+ T  + +  +  P+++VSLLLDD +L + +
Sbjct: 1717 RNKKEVQDIVVGTKAYSETGMAKPQEIVSLLLDDDELAESM 1757


>sp|Q9VDY1|INO80_DROME Putative DNA helicase Ino80 OS=Drosophila melanogaster GN=Ino80
           PE=1 SV=2
          Length = 1638

 Score =  554 bits (1427), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 296/676 (43%), Positives = 413/676 (61%), Gaps = 64/676 (9%)

Query: 200 VWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRKL 259
           +W  + +K+  +  +     HK+   + KR A  C + V+ +   S ++M+    R ++L
Sbjct: 313 IWQIMSKKESGRLQRIKSNNHKEMLANCKRVAGMCAKVVRQRAINSQRIMKETVWRAKRL 372

Query: 260 ARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHFM 319
            R+ML +WKR ++   + R+++EREA E  K++ EL E KRQQ++LNFLI QTELY+HFM
Sbjct: 373 TREMLAYWKRYERVERDQRRKQEREAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFM 432

Query: 320 QNKSSSQPSEVLPVGNDKPNDQELLLSSSEFEP----GEEEDPEEAELKKEALKAAQNAV 375
             K          +G     DQ  +LS  + E       ++D +  E+K  A + A+ A+
Sbjct: 433 SKK----------LGQGSEEDQLRILSQLDEETNARLAAQDDYDAGEMKLLAQENAEAAM 482

Query: 376 SKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFKG 435
            +    T  FD    K  +  + +A           +++   P   P    +  P++FKG
Sbjct: 483 QRDLDKTRAFDVFAKKKEKEEEEQAQE---------SVEDIKPEPRPEMKDLPQPKMFKG 533

Query: 436 SLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 495
           +LK YQ+KG+ WL N Y+QG++GILADEMGLGKT+Q++AFL H+AE   +WGPFLV++PA
Sbjct: 534 TLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLVISPA 593

Query: 496 SVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVA 555
           S L+NW  E+SRF PD K +PYWG   ER +LR+  + K L+ RDA FH++ITSYQL+V+
Sbjct: 594 STLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDASFHVVITSYQLVVS 653

Query: 556 DEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLH 615
           D KYF R+KWQYMVLDEAQAIKS+ S RWK LL F+CRNRLLL+GTPIQN+MAELWALLH
Sbjct: 654 DYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLH 713

Query: 616 FIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELT 675
           FIMPTLFDSH++FNEWFSK IESHAE+   ++E Q++RLH ILKPFMLRR+KKDV +EL+
Sbjct: 714 FIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELS 773

Query: 676 TKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFD---NSRGHLNEKKILNLMNIVIQLRKV 732
            K E+MV+C L+ RQ+  Y+A+K KI +  L      S    +     NLMN+V+Q RKV
Sbjct: 774 DKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKV 833

Query: 733 CNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKIVHQEILQS 792
           CNHPELFER +  S  +                            EY IP+++H+E L  
Sbjct: 834 CNHPELFERRDARSPFFM------------------------RCAEYTIPRLIHEEGL-I 868

Query: 793 SEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKSETFGFTHLMDLSP 852
             +L S       + L   RFNIF +E + +S+F   + +         FGFT L DLS 
Sbjct: 869 HRMLPS------RKHLLYNRFNIFKSEYIQRSLFEDVNVNSC-------FGFTRLCDLSV 915

Query: 853 AEVAFLAKGSFMERLL 868
            ++  +     ++ LL
Sbjct: 916 GDMVEVTLNGLIDFLL 931



 Score =  287 bits (735), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 144/256 (56%), Positives = 186/256 (72%), Gaps = 18/256 (7%)

Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
            D   L+TD+GKL  LD LL RL+A  HRVL+++QMTKM+++LE+YM +RK+RY+RLDGSS
Sbjct: 1147 DKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSS 1206

Query: 1107 TIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
             I  RRDMV DFQ R+DIFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAH
Sbjct: 1207 KISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAH 1266

Query: 1167 RLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLDD 1226
            RLGQTK VTVYRLICK T+EE+ILQRA +K+ +Q++V++GG+ + D L P++VVSLLLDD
Sbjct: 1267 RLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLKPKEVVSLLLDD 1326

Query: 1227 AQLEQKLRE---------LPVQVKDKPKRKQPTKAIRLDAEGDASLEDLTNVEAQVPGQE 1277
             ++E K R+         +P   + + KR+ P K + +           T + A    Q 
Sbjct: 1327 EEIEMKYRQEAKLQSSSPIPAATQSERKRRHPQKDVNMGG---------TTIAATSATQN 1377

Query: 1278 PSPDLEKASSSNKKRK 1293
            P  D+   SS+ K+ K
Sbjct: 1378 PDDDVPSCSSAAKRIK 1393


>sp|A1CZE5|INO80_NEOFI Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020
            / DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1
          Length = 1708

 Score =  539 bits (1389), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 298/686 (43%), Positives = 410/686 (59%), Gaps = 68/686 (9%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            ++W +I RKDIPK ++        +Q + ++ A+   ++ +    R+ K M+    R ++
Sbjct: 591  QIWRDIARKDIPKVYRIKTLSLSTRQENLRKTAQLASKQSRKWQERTNKSMKDTQARAKR 650

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
              R+M+ FWKR ++E  ++R+  E++  E+ K+ +  REA RQ+++LNFLI QTELYSHF
Sbjct: 651  TMREMMSFWKRNEREERDLRRLAEKQEIESAKKAEAEREANRQKRKLNFLISQTELYSHF 710

Query: 319  MQNKSSSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDP-----------------EEA 361
            +  K       +   G D   D  +  S    +PG+ +                   E+ 
Sbjct: 711  IGRK-------IKGAGADSSGDTAVDGSDETIQPGKADHTIDLPPSVADVGTKVTNFEDL 763

Query: 362  ELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTM 421
            +   E   A + A             E ++   A +   A LD      G ++  NP+++
Sbjct: 764  DFDAEDETALRQAAMANAQNAVKEAQERARAFNAEENPMAALD-----EGELNFQNPTSL 818

Query: 422  PVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
                  Q P++    LKEYQLKGL WLVN YEQG+NGILADEMGLGKTIQ+++ +A+LAE
Sbjct: 819  GDIEISQ-PKMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAE 877

Query: 482  EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRD 540
              NIWGPFLV+APAS L+NW  EI++F PD+K LPYWG  ++R VLRK  + K + Y ++
Sbjct: 878  VHNIWGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKVLRKFWDRKHITYTKE 937

Query: 541  AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
            + FH+L+TSYQL+V D +YF++VKWQYM+LDEAQAIKSS S RWK LL F+CRNRLLLTG
Sbjct: 938  SEFHVLVTSYQLVVLDSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLTG 997

Query: 601  TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
            TPIQNNM ELWALLHFIMPTLFDSH++F+EWFSK IESHA+    LNE QL RLH ILKP
Sbjct: 998  TPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKP 1057

Query: 661  FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
            FMLRRVKK V  EL  K E  V C L+ RQ+A+Y  ++N++S+  L + +    +E    
Sbjct: 1058 FMLRRVKKHVQQELGDKVEKDVFCDLTYRQRAYYANLRNRVSIMDLIEKA-AVGDEADST 1116

Query: 721  NLMNIVIQLRKVCNHPELFERNEGSSYL---YFGEIPNSLLPPPFGELEDISFSGVRNPI 777
             LMN+V+Q RKVCNHP+LFER E  S     YF E  + +     G+  D+ +S  RN I
Sbjct: 1117 TLMNLVMQFRKVCNHPDLFERAETKSPFSVGYFAETASFVRE---GQNVDVRYS-TRNLI 1172

Query: 778  EYKIPKIVHQEILQSSEILCSAVGH-----------GISRELFQKRFNIFSAENVYQSI- 825
            EY +P+           +LCS+ G            G   +  Q   NIF+ EN+ +SI 
Sbjct: 1173 EYSLPR-----------LLCSSSGRVDMAGPGNEQAGFRGKYLQHLMNIFTPENIKRSID 1221

Query: 826  ----FSLASGSDASPVKSETFGFTHL 847
                FS    +D S   +E +  +HL
Sbjct: 1222 EDGGFSFLRFADTS--INEAYEQSHL 1245



 Score =  238 bits (608), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 116/196 (59%), Positives = 147/196 (75%), Gaps = 10/196 (5%)

Query: 1050 KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM 1109
            + +TDSGKL  LD LL+ L+A  HRVLL+ QMT+M++++E+Y+ YR Y+Y RLDGS+ + 
Sbjct: 1412 RFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLE 1471

Query: 1110 DRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
            DRRD V DFQ R +IFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLG
Sbjct: 1472 DRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1531

Query: 1170 QTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDIL-------APEDVVSL 1222
            QT+ VTVYRLI + T+EE+I +RA QK  VQ++V++GG   G            +D+   
Sbjct: 1532 QTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISGGAAGGVDFNTRNRESRTKDIAMW 1591

Query: 1223 LLDDAQ---LEQKLRE 1235
            L DD Q   +EQK +E
Sbjct: 1592 LADDEQAELIEQKEKE 1607


>sp|Q4WTV7|INO80_ASPFU Putative DNA helicase ino80 OS=Neosartorya fumigata (strain ATCC
            MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ino80 PE=3
            SV=1
          Length = 1708

 Score =  539 bits (1388), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 297/678 (43%), Positives = 411/678 (60%), Gaps = 52/678 (7%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            ++W +I RKDIPK ++        +Q + ++ A+   ++ +    R+ K M+    R ++
Sbjct: 591  QIWRDIARKDIPKVYRIKTLSLSTRQENLRKTAQLASKQSRKWQERTNKSMKDTQARAKR 650

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
              R+M+ FWKR ++E  ++R+  E++  E+ K+ +  REA RQ+++LNFLI QTELYSHF
Sbjct: 651  TMREMMSFWKRNEREERDLRRLAEKQEIESAKKAEAEREANRQKRKLNFLISQTELYSHF 710

Query: 319  MQNKSSSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDP-----------------EEA 361
            +  K       +   G D   D  +  S    +PG+ +                   E+ 
Sbjct: 711  IGRK-------IKGAGADSSGDTAVDGSDETIQPGKADHTIDLPPTVADVGAKVTNFEDL 763

Query: 362  ELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTM 421
            +   E   A + A             E ++   A +   A LD      G ++  NP+++
Sbjct: 764  DFDAEDETALRQAALANAQNAVKEAQERARAFNAEENPMAALD-----EGELNFQNPTSL 818

Query: 422  PVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
                  Q P++    LKEYQLKGL WLVN YEQG+NGILADEMGLGKTIQ+++ +A+LAE
Sbjct: 819  GDIEISQ-PKMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAE 877

Query: 482  EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRD 540
              NIWGPFLV+APAS L+NW  EI++F PD+K LPYWG  ++R VLRK  + K + Y ++
Sbjct: 878  VHNIWGPFLVIAPASTLHNWQQEITKFVPDIKVLPYWGSAKDRKVLRKFWDRKHITYTKE 937

Query: 541  AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
            + FH+L+TSYQL+V D +YF++VKWQYM+LDEAQAIKSS S RWK LL F+CRNRLLLTG
Sbjct: 938  SEFHVLVTSYQLVVLDSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLTG 997

Query: 601  TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
            TPIQNNM ELWALLHFIMPTLFDSH++F+EWFSK IESHA+    LNE QL RLH ILKP
Sbjct: 998  TPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKP 1057

Query: 661  FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
            FMLRRVKK V  EL  K E  V C L+ RQ+A+Y  ++N++S+  L + +    +E    
Sbjct: 1058 FMLRRVKKHVQQELGDKVEKDVFCDLTYRQRAYYTNLRNRVSIMDLIEKA-AVGDEADST 1116

Query: 721  NLMNIVIQLRKVCNHPELFERNEGSSYL---YFGEIPNSLLPPPFGELEDISFSGVRNPI 777
             LMN+V+Q RKVCNHP+LFER E  S     YF E  + +     G+  D+ +S  RN I
Sbjct: 1117 TLMNLVMQFRKVCNHPDLFERAETKSPFSVGYFAETASFVRE---GQNVDVRYS-TRNLI 1172

Query: 778  EYKIPKIVHQEILQSSEILCSAVGH---GISRELFQKRFNIFSAENVYQSI-----FSLA 829
            EY +P+++      S  I  +  G+   G   +  Q   NIF+ EN+ +SI     FS  
Sbjct: 1173 EYNLPRLL---CSPSGRIDMAGPGNEHAGFRGKYLQHLMNIFTPENIKRSIDEDGAFSFL 1229

Query: 830  SGSDASPVKSETFGFTHL 847
              +D S   +E +  +HL
Sbjct: 1230 RFADTS--INEAYEQSHL 1245



 Score =  238 bits (608), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 116/196 (59%), Positives = 147/196 (75%), Gaps = 10/196 (5%)

Query: 1050 KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM 1109
            + +TDSGKL  LD LL+ L+A  HRVLL+ QMT+M++++E+Y+ YR Y+Y RLDGS+ + 
Sbjct: 1412 RFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLE 1471

Query: 1110 DRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
            DRRD V DFQ R +IFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLG
Sbjct: 1472 DRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1531

Query: 1170 QTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDIL-------APEDVVSL 1222
            QT+ VTVYRLI + T+EE+I +RA QK  VQ++V++GG   G            +D+   
Sbjct: 1532 QTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISGGAAGGVDFNTRNRESRTKDIAMW 1591

Query: 1223 LLDDAQ---LEQKLRE 1235
            L DD Q   +EQK +E
Sbjct: 1592 LADDEQAELIEQKEKE 1607


>sp|Q5BAZ5|INO80_EMENI Putative DNA helicase ino80 OS=Emericella nidulans (strain FGSC A4 /
            ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ino80 PE=3
            SV=1
          Length = 1612

 Score =  528 bits (1360), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/553 (48%), Positives = 364/553 (65%), Gaps = 19/553 (3%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            ++W +I RKDIPK ++T       +Q + ++ A+   ++ +    R+ K M+    R ++
Sbjct: 569  QIWRDIARKDIPKVYRTKVNSLSTRQENLRKTAQLASKQSRKWQERTNKSMKDTQARAKR 628

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
              R+M+ FWKR ++E  ++R+  E++  E+ KR +  REA RQ+++LNFLI QTELYSHF
Sbjct: 629  TMREMMSFWKRNEREERDLRRLAEKQELESAKRAEAEREANRQKRKLNFLISQTELYSHF 688

Query: 319  MQNKSSSQPSEVLPVGNDKPNDQELLLSS----SEFEPGEEEDPEEAELKKEALKAAQNA 374
            +  K      E    G       +L   +    + FE  + +  ++  L++ A+  AQ+A
Sbjct: 689  IGRKIPGAGGESGDAGVQGTEAMDLTPGAGAKVTNFEDLDFDAEDDTALRQAAMANAQSA 748

Query: 375  VSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMPVTSTVQTPELFK 434
            V K +     FD          D   + +D        ++  NP+++      Q P +  
Sbjct: 749  VQKAQERARAFD----------DPNKSTMDT--MDDSELNFQNPTSLGDIEISQ-PTMLT 795

Query: 435  GSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 494
              LKEYQLKGL WLVN YEQG+NGILADEMGLGKTIQ+++ +A+LAE  NIWGPFLV+AP
Sbjct: 796  AKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAP 855

Query: 495  ASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILITSYQLL 553
            AS L+NW  EI++F P++K LPYWG  ++R +LRK  + K + Y +++ FH+L+TSYQL+
Sbjct: 856  ASTLHNWQQEITKFVPNIKVLPYWGNAKDRKILRKFWDRKHITYTKESEFHVLVTSYQLV 915

Query: 554  VADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWAL 613
            V D +YF++VKWQYM+LDEAQAIKSS S RWK+LL F+CRNRLLLTGTPIQNNM ELWAL
Sbjct: 916  VLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWAL 975

Query: 614  LHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISE 673
            LHFIMPTLFDSH++F+EWFSK IESHA+    LNE QL RLH ILKPFMLRRVKK V  E
Sbjct: 976  LHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQE 1035

Query: 674  LTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVC 733
            L  K E  V C L+ RQ+A Y  ++N++S+  L + +    +E     LMN+V+Q RKVC
Sbjct: 1036 LGDKVEKDVFCDLTYRQRALYTNLRNRVSIMDLIEKA-AVGDETDSTTLMNLVMQFRKVC 1094

Query: 734  NHPELFERNEGSS 746
            NHP+LFER E  S
Sbjct: 1095 NHPDLFERAETKS 1107



 Score =  243 bits (619), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 118/196 (60%), Positives = 147/196 (75%), Gaps = 10/196 (5%)

Query: 1050 KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIM 1109
            + +TDSGKL  LD LL+ L+A  HRVLL+ QMT+M++++E+Y+ YR Y+Y RLDGS+ + 
Sbjct: 1315 RFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLE 1374

Query: 1110 DRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1169
            DRRD V DFQ R DIFVFLLSTRAGGLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLG
Sbjct: 1375 DRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1434

Query: 1170 QTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDIL-------APEDVVSL 1222
            QT+ VTVYRLI + T+EE+I +RA QK  VQ++V++GG   G            +D+   
Sbjct: 1435 QTRQVTVYRLITRSTIEERIRKRALQKEEVQRVVISGGAAGGVDFNTRNRDSKTKDIAMW 1494

Query: 1223 LLDDAQ---LEQKLRE 1235
            L DD Q   +EQK RE
Sbjct: 1495 LADDEQAELIEQKERE 1510


>sp|Q872I5|INO80_NEUCR Putative DNA helicase ino-80 OS=Neurospora crassa (strain ATCC 24698
            / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
            GN=ino-80 PE=3 SV=3
          Length = 1997

 Score =  527 bits (1357), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 285/644 (44%), Positives = 409/644 (63%), Gaps = 36/644 (5%)

Query: 199  KVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRK 258
            ++W ++ RKD+ K  +     +  +  + K+ A    +E K    R+ K  +    R ++
Sbjct: 880  QIWRDLARKDVNKVFRLAIDSYSTKSSNLKKTAILASKEAKRWQLRTNKGTKDLQARAKR 939

Query: 259  LARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHF 318
            + RDM+ FWKR ++E  ++RK  E++  E  ++E+  REA RQ+++LNFLI QTELYSHF
Sbjct: 940  VMRDMMGFWKRNEREERDLRKAAEKQELENARKEEADREAARQKRKLNFLISQTELYSHF 999

Query: 319  MQNK--------SSSQPSEVLPVGNDKP-NDQELLLSS-------SEFEPGEEEDPEEAE 362
            +  K        S+  P E+    +  P N+ ++ + +       + FE  + +  +E+ 
Sbjct: 1000 IGKKIKTNEVERSTDHPDEIAAEKDKIPENEMDIEVPTGPIGAKVTNFENLDFDAEDEST 1059

Query: 363  LKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPSTMP 422
            L+  A+  AQNA+++ +     F+ E SKL E                G ++  NP TM 
Sbjct: 1060 LRAAAMANAQNAIAEAQKKAREFNKEESKLDE---------------DGEMNFQNP-TMM 1103

Query: 423  VTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEE 482
                ++ P+L    LKEYQLKGL WLVN YEQG+NGILADEMGLGKT+Q+++ +A+LAE+
Sbjct: 1104 GDVEIEQPKLLNCQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAEK 1163

Query: 483  KNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDA 541
             +IWGPFLVVAPAS L+NW  EI++F P  K LPYWG   +R VLRK  + K   Y++DA
Sbjct: 1164 YDIWGPFLVVAPASTLHNWQQEITKFVPQFKVLPYWGTAGDRKVLRKFWDRKHTTYKKDA 1223

Query: 542  GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
             FH++ITSYQL+V+D  YF+++KWQYM+LDEAQAIKSS S RWK LL F+CRNRLLLTGT
Sbjct: 1224 PFHVMITSYQLVVSDVAYFQKMKWQYMILDEAQAIKSSQSSRWKCLLGFHCRNRLLLTGT 1283

Query: 602  PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
            PIQNNM ELWALLHFIMP+LFDSH++F+EWFSK IESHA+    LNE QL RLH ILKPF
Sbjct: 1284 PIQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLKRLHMILKPF 1343

Query: 662  MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
            MLRRVKK V  EL  K E+ V C L+ RQ+A Y  ++N+IS+  L +  +  L +    +
Sbjct: 1344 MLRRVKKHVQKELGDKIEMDVFCDLTYRQRAMYANLRNQISIMDLIE--KATLGDDDSAS 1401

Query: 722  LMNIVIQLRKVCNHPELFERNEGSSYLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKI 781
            LMN+V+Q RKVCNHP+LFER + +S   FG    +      G    + +S  R+ I+Y++
Sbjct: 1402 LMNLVMQFRKVCNHPDLFERADTASPYSFGHFAETASFIREGSQVTVGYS-TRSLIQYEL 1460

Query: 782  PKIVHQEILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSI 825
            P+++ ++  +  +        G   +   ++FNI++ E++ +S+
Sbjct: 1461 PRLLWRDGGRLHKAGEDNQVAGWRNQWLNEKFNIWTPEHIRESL 1504



 Score =  231 bits (588), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 120/212 (56%), Positives = 152/212 (71%), Gaps = 19/212 (8%)

Query: 1039 SCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYR 1098
            + P M+ F     +TDSGKL  LD LL+ L+   HRVLL+ QMT+M++++E+Y+ YR Y+
Sbjct: 1686 TVPSMRRF-----VTDSGKLAKLDELLRELKENGHRVLLYFQMTRMIDLMEEYLTYRNYK 1740

Query: 1099 YLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLD 1158
            Y RLDGS+ + DRRD V DFQ R +IF+FLLSTRAGGLGINLT+ADTVIFY+SDWNPT+D
Sbjct: 1741 YCRLDGSTKLEDRRDTVADFQTRPEIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTID 1800

Query: 1159 LQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDIL---- 1214
             QAMDRAHRLGQTK VTVYRLI + T+EE+I +RA QK  VQ++V+TGG           
Sbjct: 1801 SQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVITGGSSAAGGGVDFS 1860

Query: 1215 ---APE----DVVSLLLDDAQ---LEQKLREL 1236
               APE    D+   L DD Q   +E++ REL
Sbjct: 1861 GRRAPENRNRDIAMWLADDEQAEMIEKREREL 1892


>sp|Q0UG82|INO80_PHANO Putative DNA helicase INO80 OS=Phaeosphaeria nodorum (strain SN15 /
            ATCC MYA-4574 / FGSC 10173) GN=INO80 PE=3 SV=2
          Length = 1673

 Score =  525 bits (1352), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 301/689 (43%), Positives = 416/689 (60%), Gaps = 58/689 (8%)

Query: 203  NIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVSRSLKLMRGAAIRTRKLARD 262
            ++ RKD+PK  +        +Q + ++ A+   +E +    R+ K  +    R ++  R+
Sbjct: 586  DLARKDVPKVVRIKENSLSTKQSNLRKTAQLAAKEARRWQMRTNKNQKDTQARAKRGMRE 645

Query: 263  MLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHFMQNK 322
            ML FWKR +++  E RK  ER+  E  K+ +  REA RQ+++LNFLI QTELYSHF+  K
Sbjct: 646  MLAFWKRNERDERESRKNAERQELENAKKVEAEREANRQKRKLNFLISQTELYSHFIGKK 705

Query: 323  SSSQPSEVLPVGNDKPNDQELLLSSSEFEPGEEEDPEEAELKKEALKAAQNA-VSKQKML 381
            + +   E         +D E   S+    P E E P    +  + +     A V+  + L
Sbjct: 706  ARTAEIER------STDDAETAASA----PAEAEKPG---IDVDGMDGNPTAKVTNFEDL 752

Query: 382  TNTFDTECSK-----------LREAADTEAAMLDV-SVAGSGNIDLHNPSTMPVTST-VQ 428
                D E +            ++EA D   A  +       G ++  NPS +      + 
Sbjct: 753  DFDNDDESALNAAAMANAQHAIQEAQDRARAFNNPEGQEDDGELNFQNPSGLQNKEDWIP 812

Query: 429  TPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGP 488
             P+L   +LKEYQLKGL WLVN YEQG+NGILADEMGLGKT+Q+++ +A+LAE  NIWGP
Sbjct: 813  QPKLLNCTLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAERYNIWGP 872

Query: 489  FLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRRDAGFHILI 547
            FLV+APAS L+NW  EI++F PDL  +PYWG  ++R VLRK  + K + Y RD+ FH+++
Sbjct: 873  FLVIAPASTLHNWQQEIAKFVPDLNVIPYWGTAKDRKVLRKLWDRKHVTYTRDSPFHVVV 932

Query: 548  TSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNM 607
            +SYQL+V D +YF++++WQYM+LDEAQAIKSSNS RWK+LL+F+ RNRLLLTGTPIQNNM
Sbjct: 933  SSYQLVVQDAQYFQKMRWQYMILDEAQAIKSSNSSRWKSLLNFHSRNRLLLTGTPIQNNM 992

Query: 608  AELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPFMLRRVK 667
             ELWALLHFIMP+LFDSH++F+EWFSK IESHA+    LNE QL RLH ILKPFMLRRVK
Sbjct: 993  QELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVK 1052

Query: 668  KDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVI 727
            K V  EL  K E+ V+C L+ RQ+A+Y  ++NKIS+  L + + G  +E+    LMN+V+
Sbjct: 1053 KHVQKELGDKIELDVYCDLTYRQRAYYANLRNKISIMDLIEKAVG--DEQDSATLMNLVM 1110

Query: 728  QLRKVCNHPELFERNEGSS---YLYFGEIPNSLLPPPFGELEDISFSGVRNPIEYKIPKI 784
            Q RKVCNHP+LFER +  S   +  F E P+ L     G+   ++++  RN IEY +P++
Sbjct: 1111 QFRKVCNHPDLFERADTWSPFTFASFAETPSFLRE---GQNVRVAYT-TRNFIEYSLPRL 1166

Query: 785  VHQ-----EILQSSEILCSAVGHGISRELFQKRFNIFSAENVYQSIFSLASGSDASPVKS 839
            + +     EI           GH          FNI+S  N+ QS    A  +DA     
Sbjct: 1167 IGRNGGRLEIAGPDNEKAGFRGH-----YLDNLFNIWSPHNMEQS----AREADA----- 1212

Query: 840  ETFGFTHLMDLSPAEVAFLAKGSFMERLL 868
                +    DLS  EV+ +AK    ER L
Sbjct: 1213 --HSWLRFSDLSATEVSKIAKSDLFERAL 1239



 Score =  237 bits (604), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 126/249 (50%), Positives = 170/249 (68%), Gaps = 20/249 (8%)

Query: 1049 AKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTI 1108
            ++ +TDSGKL  LD LLK L+A +HRVLL+ QMT+M++++E+Y+ YR Y+Y RLDGS+ +
Sbjct: 1392 SRFVTDSGKLARLDALLKGLKAGDHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKL 1451

Query: 1109 MDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1168
             DRRD V DFQ    IFVFLLSTRAGGLGINLT+ADTVIFY+SDWNPT+D QAMDRAHRL
Sbjct: 1452 EDRRDTVADFQSDPTIFVFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRL 1511

Query: 1169 GQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGG-------HVQGDILAPEDVVS 1221
            GQT+ VTVYRLI   T+EE+I +RA QK  VQ++V++GG       + +      +D+  
Sbjct: 1512 GQTRQVTVYRLITSGTIEERIRKRALQKEEVQRVVISGGAGGAVDFNTRSRENRTKDMAM 1571

Query: 1222 LLLDD---AQLEQKLRELPVQVKDKPKRKQPTKAIRLDA-------EGDASLEDL---TN 1268
             L+DD   A++E+K  EL    K+ P  K+ +K  R++A       EG+   ++    + 
Sbjct: 1572 WLVDDEQAAEIEKKEAELAEAEKNAPPGKKRSKKKRVEANLDDMYHEGEGHFDESAKGSG 1631

Query: 1269 VEAQVPGQE 1277
                VPG E
Sbjct: 1632 AATPVPGTE 1640


>sp|Q6FV37|INO80_CANGA Putative DNA helicase INO80 OS=Candida glabrata (strain ATCC 2001 /
            CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=INO80 PE=3
            SV=1
          Length = 1484

 Score =  518 bits (1335), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 281/628 (44%), Positives = 399/628 (63%), Gaps = 35/628 (5%)

Query: 184  KDPSVIEKEEMEKIGKVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVS 243
            KD   I++        +W ++ RKD  K  +        + ++ K+ +  C RE +   +
Sbjct: 477  KDAKAIQRHYDNTYTMIWKDMARKDCMKISRLVQQIQSTRALNYKKTSSLCAREARKWQT 536

Query: 244  RSLKLMRGAAIRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQ 303
            R+ K ++    R RK  R+M  FWK+ ++E  +++K+ EREA E  K+E+E +E+KRQ +
Sbjct: 537  RNFKQVKDFQTRARKGIREMANFWKKNEREERDLKKKAEREALELAKKEEEEKESKRQAK 596

Query: 304  RLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKPNDQELLLSS---SEFEPGEEEDPEE 360
            +LNFL+ QTELYSHF+  K  +   E   V  +  ++ +L  ++   ++F   + ++  +
Sbjct: 597  KLNFLLTQTELYSHFIGRKIKTSALEGNEVAEEDEDNYDLTTTAPNKNDFHAIDFDNEND 656

Query: 361  AELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNPST 420
             +LK +A + A NA+++ +     FD      R+   TE+            ++  NP++
Sbjct: 657  EQLKLKAAQNASNALAETRAKAKAFD---DAHRQQQSTESD-------DEEEMNFQNPTS 706

Query: 421  MPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
            +    T++ P++   +LKEYQLKGL WL N Y+QG+NGILADEMGLGKT+Q+++ LAHLA
Sbjct: 707  LGEI-TIEQPKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLA 765

Query: 481  EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL-YRR 539
            E  NIWGPFLVV PAS L+NW +EIS+F P  K LPYWG   +R VLRK  + K L Y  
Sbjct: 766  EHHNIWGPFLVVTPASTLHNWVNEISKFVPQFKILPYWGSANDRKVLRKFWDRKNLRYSE 825

Query: 540  DAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLT 599
             + FH++ITSYQ++VAD  Y +++KWQYM+LDEAQAIKSS S RWK LLSF+CRNRLLLT
Sbjct: 826  KSPFHVMITSYQMVVADASYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLT 885

Query: 600  GTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILK 659
            GTPIQNNM ELWALLHFIMP+LFDSH++FNEWFS+ IESHAE   +LN+ QL RLH ILK
Sbjct: 886  GTPIQNNMQELWALLHFIMPSLFDSHDEFNEWFSRDIESHAEGNSSLNQQQLRRLHMILK 945

Query: 660  PFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKIS---------LAGLFDNS 710
            PFMLRR+KK+V SEL  K E+ V C L+ RQ   YQ +K+++S          A   D +
Sbjct: 946  PFMLRRIKKNVQSELGDKIEIDVMCDLTQRQTKLYQVLKSQMSSNYDAIENAAAEGSDIA 1005

Query: 711  RGHLNEKKILNLMNIVIQLRKVCNHPELFER---NEGSSYLYFGE---IPNSLLPPPFGE 764
             G  +++ I+   N V+Q RKVCNHP+LFER   N   S+  FG+   + +S +    G 
Sbjct: 1006 GGGNSDQSII---NAVMQFRKVCNHPDLFERADINSPFSFTSFGKTSSLISSSIATSGGL 1062

Query: 765  LEDIS--FSGVRNPIEYKIPKIVHQEIL 790
             E IS       NPI   IPK+++++++
Sbjct: 1063 TETISELMYSSTNPINCAIPKLIYEDLI 1090



 Score =  232 bits (591), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/254 (49%), Positives = 169/254 (66%), Gaps = 20/254 (7%)

Query: 959  FIPQAQAPPINVQCSDR-NFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQ 1017
            + P+  APPIN   +   NFT +M+    +P     +I  A +S  I P     P Q   
Sbjct: 1206 YCPKVVAPPINFNVNGSLNFTNKMSSYLFNP-----VITTALSS--IPP-----PTQYNM 1253

Query: 1018 EIDSELPVAKPALQLTY-----QIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAEN 1072
             +   +P+ +  +   Y     + F S   M S D  + +T+S KL+ LD LL  L+  +
Sbjct: 1254 FVKKCIPIEEFPISEMYPNPLNKHFSSNISMPSMD--RFITESAKLKKLDELLVELKKND 1311

Query: 1073 HRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTR 1132
            HRVL++ QMTKM++++E+Y+ YR+Y ++RLDGSS + DRRD+V D+Q   +IF+FLLSTR
Sbjct: 1312 HRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFIFLLSTR 1371

Query: 1133 AGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQR 1192
            AGGLGINLTAADTVIFY+SDWNPT+D QAMDRAHRLGQTK VTVYRL+ + T+EE++  R
Sbjct: 1372 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLLVRGTIEERMRDR 1431

Query: 1193 ASQKNTVQQLVMTG 1206
            A QK  VQQ+VM G
Sbjct: 1432 AKQKEQVQQVVMEG 1445


>sp|P53115|INO80_YEAST Putative DNA helicase INO80 OS=Saccharomyces cerevisiae (strain ATCC
            204508 / S288c) GN=INO80 PE=1 SV=1
          Length = 1489

 Score =  516 bits (1329), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 285/685 (41%), Positives = 413/685 (60%), Gaps = 66/685 (9%)

Query: 184  KDPSVIEKEEMEKIGKVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVS 243
            K+   I++        +W ++ RKD  K  +        +  + ++ +  C RE K   S
Sbjct: 460  KEARAIQRHYDNTYTTIWKDMARKDSTKMSRLVQQIQSIRSTNFRKTSSLCAREAKKWQS 519

Query: 244  RSLKLMRGAAIRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQ 303
            ++ K ++    R R+  R+M  FWK+ ++E  +++K+ E+EA E  K+E+E +E+KRQ +
Sbjct: 520  KNFKQIKDFQTRARRGIREMSNFWKKNEREERDLKKKIEKEAMEQAKKEEEEKESKRQAK 579

Query: 304  RLNFLIQQTELYSHFMQNKSSSQPSEVLPVG-NDKPNDQELLLSS-----SEFEPGEEED 357
            +LNFL+ QTELYSHF+  K  +   E   V  ND  + + + +S+     ++F   + ++
Sbjct: 580  KLNFLLTQTELYSHFIGRKIKTNELEGNNVSSNDSESQKNIDISALAPNKNDFHAIDFDN 639

Query: 358  PEEAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHN 417
              + +L+  A + A NA+++ +     FD            + A           ++  N
Sbjct: 640  ENDEQLRLRAAENASNALAETRAKAKQFD------------DHANAHEEEEEEDELNFQN 687

Query: 418  PSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA 477
            P+++    T++ P++   +LKEYQLKGL WL N Y+QG+NGILADEMGLGKT+Q+++ LA
Sbjct: 688  PTSLGEI-TIEQPKILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLA 746

Query: 478  HLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL- 536
            HLAE  NIWGPFLVV PAS L+NW +EIS+F P  K LPYWG   +R VLRK  + K L 
Sbjct: 747  HLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLR 806

Query: 537  YRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRL 596
            Y ++A FH+++TSYQ++V D  Y +++KWQYM+LDEAQAIKSS S RWK LLSF+CRNRL
Sbjct: 807  YNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRL 866

Query: 597  LLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHA 656
            LLTGTPIQN+M ELWALLHFIMP+LFDSH++FNEWFSK IESHAE    LN+ QL RLH 
Sbjct: 867  LLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQLRRLHM 926

Query: 657  ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISL-------AGLFDN 709
            ILKPFMLRRVKK+V SEL  K E+ V C L+ RQ   YQ +K++IS        A   D+
Sbjct: 927  ILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDS 986

Query: 710  -SRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS---SYLYFGEIPNSLLPP----- 760
             S    N     NL+N V+Q RKVCNHP+LFER +     S+  FG+  + L        
Sbjct: 987  TSNSASNSGSDQNLINAVMQFRKVCNHPDLFERADVDSPFSFTTFGKTTSMLTASVANNN 1046

Query: 761  -------------------PFGELEDISFSGVRNPIEYKIPKIVHQEIL---QSSEILCS 798
                                 G+  D+ +S  RNPI+Y +P++++++++    ++++   
Sbjct: 1047 SSVISNSNMNLSSMSSNNISNGKFTDLIYSS-RNPIKYSLPRLIYEDLILPNYNNDV--- 1102

Query: 799  AVGHGISRELFQKRFNIFSAENVYQ 823
                 I+ +L   +FNIF+    Y+
Sbjct: 1103 ----DIANKLKNVKFNIFNPSTNYE 1123



 Score =  230 bits (586), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 121/260 (46%), Positives = 168/260 (64%), Gaps = 10/260 (3%)

Query: 959  FIPQAQAPPINVQC-SDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQ 1017
            + P   APP+ ++     + T  +  E  DP + + L      ++     K G P +   
Sbjct: 1210 YHPNVSAPPVTIEVLGSSHVTNSINNELFDPLISQALSDIPAITQYNMHVKKGIPVE--- 1266

Query: 1018 EIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLL 1077
                + P      +   + F S   M S D  + +T+S KL+ LD LL +L++E HRVL+
Sbjct: 1267 ----DFPKTGLFPEPLNKNFSSNISMPSMD--RFITESAKLRKLDELLVKLKSEGHRVLI 1320

Query: 1078 FAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLG 1137
            + QMTKM++++E+Y+ YR+Y ++RLDGSS + DRRD+V D+Q   +IFVFLLSTRAGGLG
Sbjct: 1321 YFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLG 1380

Query: 1138 INLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKN 1197
            INLTAADTVIFY+SDWNPT+D QAMDRAHRLGQT+ VTVYRL+ + T+EE++  RA QK 
Sbjct: 1381 INLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKE 1440

Query: 1198 TVQQLVMTGGHVQGDILAPE 1217
             VQQ+VM G   + +I   E
Sbjct: 1441 QVQQVVMEGKTQEKNIKTIE 1460


>sp|A6ZU34|INO80_YEAS7 Putative DNA helicase INO80 OS=Saccharomyces cerevisiae (strain
            YJM789) GN=INO80 PE=3 SV=1
          Length = 1495

 Score =  515 bits (1326), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 284/679 (41%), Positives = 409/679 (60%), Gaps = 66/679 (9%)

Query: 184  KDPSVIEKEEMEKIGKVWVNIVRKDIPKYHKTFFTFHKKQQIDAKRFAETCQREVKMKVS 243
            K+   I++        +W ++ RKD  K  +        +  + ++ +  C RE K   S
Sbjct: 466  KEARAIQRHYDNTYTTIWKDMARKDSTKMSRLVQQIQSIRSTNFRKTSSLCAREAKKWQS 525

Query: 244  RSLKLMRGAAIRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALKREQELREAKRQQQ 303
            ++ K ++    R R+  R+M  FWK+ ++E  +++K+ E+EA E  K+E+E +E+KRQ +
Sbjct: 526  KNFKQIKDFQTRARRGIREMSNFWKKNEREERDLKKKIEKEAMEQAKKEEEEKESKRQAK 585

Query: 304  RLNFLIQQTELYSHFMQNKSSSQPSEVLPVGNDKPNDQE------LLLSSSEFEPGEEED 357
            +LNFL+ QTELYSHF+  K  +   E   V N+    Q+      L  + ++F   + ++
Sbjct: 586  KLNFLLTQTELYSHFIGRKIKTNELEGNNVSNNDSESQKNIDISALAPNKNDFHAIDFDN 645

Query: 358  PEEAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHN 417
              + +L+  A + A NA+++ +     FD            + A           ++  N
Sbjct: 646  ENDEQLRLRAAENASNALAETRAKAKQFD------------DHANAHGEEEEEDELNFQN 693

Query: 418  PSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLA 477
            P+++    T++ P++   +LKEYQLKGL WL N Y+QG+NGILADEMGLGKT+Q+++ LA
Sbjct: 694  PTSLGEI-TIEQPKILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLA 752

Query: 478  HLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL- 536
            HLAE  NIWGPFLVV PAS L+NW +EIS+F P  K LPYWG   +R VLRK  + K L 
Sbjct: 753  HLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLR 812

Query: 537  YRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRL 596
            Y ++A FH+++TSYQ++V D  Y +++KWQYM+LDEAQAIKSS S RWK LLSF+CRNRL
Sbjct: 813  YSKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRL 872

Query: 597  LLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHA 656
            LLTGTPIQN+M ELWALLHFIMP+LFDSH++FNEWFSK IESHAE    LN+ QL RLH 
Sbjct: 873  LLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQLRRLHM 932

Query: 657  ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISL-------AGLFDN 709
            ILKPFMLRRVKK+V SEL  K E+ V C L+ RQ   YQ +K++IS        A   D+
Sbjct: 933  ILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDS 992

Query: 710  -SRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGS---SYLYFGEIPNSLLPP----- 760
             S    N     NL+N V+Q RKVCNHP+LFER +     S+  FG+  + L        
Sbjct: 993  TSNSASNSGSDQNLINAVMQFRKVCNHPDLFERADVDSPFSFTTFGKTTSMLTASVANNN 1052

Query: 761  -------------------PFGELEDISFSGVRNPIEYKIPKIVHQEIL---QSSEILCS 798
                                 G+  D+ +S  RNPI+Y +P++++++++    ++++   
Sbjct: 1053 SSVISNSNMNLSSMSSNNISNGKFTDLIYSS-RNPIKYSLPRLIYEDLILPNYNNDV--- 1108

Query: 799  AVGHGISRELFQKRFNIFS 817
                 I+ +L   +FNIF+
Sbjct: 1109 ----DIANKLKNVKFNIFN 1123



 Score =  229 bits (584), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 121/260 (46%), Positives = 168/260 (64%), Gaps = 10/260 (3%)

Query: 959  FIPQAQAPPINVQC-SDRNFTYRMTEEQHDPWLKRLLIGFARTSENIGPRKPGGPHQLIQ 1017
            + P   APP+ ++     + T  +  E  DP + + L      ++     K G P   ++
Sbjct: 1216 YHPNVSAPPVTIEVLGSSHVTNSINNELFDPLISQALSDIPAITQYNMHVKKGIP---VE 1272

Query: 1018 EIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLL 1077
            +        +P L   +    S P M  F     +T+S KL+ LD LL +L++E HRVL+
Sbjct: 1273 DFPKTGLFPEP-LNKNFSSNISTPSMDRF-----ITESAKLRKLDELLVKLKSEGHRVLI 1326

Query: 1078 FAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLG 1137
            + QMTKM++++E+Y+ YR+Y ++RLDGSS + DRRD+V D+Q   +IFVFLLSTRAGGLG
Sbjct: 1327 YFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLG 1386

Query: 1138 INLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKN 1197
            INLTAADTVIFY+SDWNPT+D QAMDRAHRLGQT+ VTVYRL+ + T+EE++  RA QK 
Sbjct: 1387 INLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKE 1446

Query: 1198 TVQQLVMTGGHVQGDILAPE 1217
             VQQ+VM G   + +I   E
Sbjct: 1447 QVQQVVMEGKTQEKNIKTIE 1466


>sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3
          Length = 3230

 Score =  326 bits (835), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 154/332 (46%), Positives = 217/332 (65%), Gaps = 16/332 (4%)

Query: 423 VTSTVQTP--ELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLA 480
            T+ V+TP   L +G L+EYQ  GL WLV  YE+ LNGILADEMGLGKTIQ ++ LAHLA
Sbjct: 602 ATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLA 661

Query: 481 EEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRD 540
            EK  WGP L++ P SV+ NW  E+ R+CP  K L Y+G  +ER + R+       + + 
Sbjct: 662 CEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQG------WTKP 715

Query: 541 AGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTG 600
             FH+ ITSY+L++ D + FRR  W+Y++LDEAQ IK+  S RW++LL+FN + RLLLTG
Sbjct: 716 NAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTG 775

Query: 601 TPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKP 660
           TP+QN++ ELW+L+HF+MP +F SH +F EWFS  +    E     NE  + RLH +L+P
Sbjct: 776 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRP 835

Query: 661 FMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKIL 720
           F+LRRVK DV  ++  K E ++ C+LS RQ+  Y     + +       ++  L     +
Sbjct: 836 FLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTT-------TKETLATGHFM 888

Query: 721 NLMNIVIQLRKVCNHPELFE-RNEGSSYLYFG 751
           +++NI++QLRKVCNHP LF+ R   S ++  G
Sbjct: 889 SVINILMQLRKVCNHPNLFDPRPVTSPFITPG 920



 Score =  204 bits (518), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 86/155 (55%), Positives = 120/155 (77%)

Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
            D GKLQTL +LL++L+AE HRVL+F QMT+ML++LE ++ Y  + YLRLDGS+ +  R+ 
Sbjct: 2041 DCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQA 2100

Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
            ++  F     IF F+LSTR+GG+G+NLT ADTV+FY+SDWNPT+D QA DR HR+GQT+D
Sbjct: 2101 LMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 2160

Query: 1174 VTVYRLICKETVEEKILQRASQKNTVQQLVMTGGH 1208
            V +YRLI + TVEE IL++A+QK  +  + + GG+
Sbjct: 2161 VHIYRLISERTVEENILKKANQKRMLGDMAIEGGN 2195


>sp|Q9NDJ2|DOM_DROME Helicase domino OS=Drosophila melanogaster GN=dom PE=1 SV=2
          Length = 3198

 Score =  320 bits (821), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 168/387 (43%), Positives = 237/387 (61%), Gaps = 23/387 (5%)

Query: 354  EEEDPEEAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNI 413
            EE+D +E  LK  +L A  +A S      +T     +K  +    +AA L  S+   GN 
Sbjct: 841  EEQDEQEDGLK--SLMADADATSGAAGSGSTAGASGNK--DDMLNDAAALAESLQPKGNT 896

Query: 414  DLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAM 473
                    PV      P L K SL+EYQ  GL WLV   E+ LNGILADEMGLGKTIQ +
Sbjct: 897  LSSTNVVTPV------PFLLKHSLREYQHIGLDWLVTMNERKLNGILADEMGLGKTIQTI 950

Query: 474  AFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINP 533
            A LAHLA  K  WGP L+V P+SV+ NW  E  ++CP  K L Y+G  +ER + R     
Sbjct: 951  ALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVG--- 1007

Query: 534  KRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCR 593
               + +   FH+ ITSY+L+V D++ FRR KW+Y++LDEAQ IK+  S RW+ LL+F+  
Sbjct: 1008 ---WTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTE 1064

Query: 594  NRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNR 653
             RLLLTGTP+QN++ ELW+L+HF+MP +F SH +F EWFS  +    E     NE  + R
Sbjct: 1065 RRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLITR 1124

Query: 654  LHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGH 713
            LH +++PF+LRR+KK+V  ++  K E ++ C+LS+RQ+  Y+   ++         +R  
Sbjct: 1125 LHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRA-------KTRET 1177

Query: 714  LNEKKILNLMNIVIQLRKVCNHPELFE 740
            L    +L+++N+++QLRKVCNHP +FE
Sbjct: 1178 LQTGNLLSVINVLMQLRKVCNHPNMFE 1204



 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 87/162 (53%), Positives = 121/162 (74%)

Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
            DP  +  D GKLQT+D LL++L+   HRVL+F QMTKML++LE ++NY  + YLRLDGS+
Sbjct: 1649 DPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGST 1708

Query: 1107 TIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
             +  R+ ++  F     IF F+LSTR+GG+GINLT ADTVIFY+SDWNPT+D QA DR H
Sbjct: 1709 RVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCH 1768

Query: 1167 RLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGH 1208
            R+GQT+DV +YRL+ + T+E  IL++A+QK  +  + + GG+
Sbjct: 1769 RIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEGGN 1810


>sp|Q9NEL2|SSL1_CAEEL Helicase ssl-1 OS=Caenorhabditis elegans GN=ssl-1 PE=2 SV=4
          Length = 2395

 Score =  318 bits (816), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 150/319 (47%), Positives = 212/319 (66%), Gaps = 15/319 (4%)

Query: 424 TSTVQTPE--LFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 481
           T+ V+TP   L +G L+EYQ+ GL W+V  YE+ LNGILADEMGLGKTIQ ++ LAH+A 
Sbjct: 543 TTQVKTPVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMAC 602

Query: 482 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDA 541
            ++IWGP L+V P SV+ NW  E  ++CP LK L Y+G  +ER   RK       + +  
Sbjct: 603 SESIWGPHLIVVPTSVILNWEMEFKKWCPALKILTYFGTAKERAEKRKG------WMKPN 656

Query: 542 GFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGT 601
            FH+ ITSY+ +  D + F++  WQY++LDEAQ IK+  S RW+ LL+   R RLLLTGT
Sbjct: 657 CFHVCITSYKTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGT 716

Query: 602 PIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLNRLHAILKPF 661
           P+QN++ ELW+L+HF+MPT+F SH+ F +WFS  +    E     N   + RLH +L+PF
Sbjct: 717 PLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPF 776

Query: 662 MLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILN 721
           +LRR+KK+V  +L  KTE +V+C LS RQ+  Y    ++ S       ++ +L    +++
Sbjct: 777 ILRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRRS-------TKENLKSGNMMS 829

Query: 722 LMNIVIQLRKVCNHPELFE 740
           ++NIV+QLRK CNHP LFE
Sbjct: 830 VLNIVMQLRKCCNHPNLFE 848



 Score =  187 bits (474), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 82/177 (46%), Positives = 123/177 (69%)

Query: 1054 DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD 1113
            D GKLQTL +LL++L    HR L+F QM+KML++L+ ++++  Y+Y RLDG++ +  R+ 
Sbjct: 1186 DCGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQA 1245

Query: 1114 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1173
            M+  F     +F F+LSTR+GG+G+NLT ADTVIFY+SDWNPT+D QA DR HR+GQT++
Sbjct: 1246 MMERFNADPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRN 1305

Query: 1174 VTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLDDAQLE 1230
            V++YRLI + T+EE IL++A+QK  + +L +       +     D +  L D   +E
Sbjct: 1306 VSIYRLISERTIEENILRKATQKRRLGELAIDEAGFTPEFFKQSDSIRDLFDGENVE 1362


>sp|Q6FK48|SWR1_CANGA Helicase SWR1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
           3761 / NBRC 0622 / NRRL Y-65) GN=SWR1 PE=3 SV=1
          Length = 1450

 Score =  305 bits (782), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 152/340 (44%), Positives = 211/340 (62%), Gaps = 27/340 (7%)

Query: 427 VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
           V TP L +G+L+ YQ +GL WL + Y    NGILADEMGLGKTIQ ++ L++LA EK+ W
Sbjct: 618 VPTPSLLRGTLRTYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLSYLACEKHNW 677

Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
           GP L+V P SVL NW  E  RF P  K L Y+G  Q+R   RK  N      +   FH+ 
Sbjct: 678 GPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGNPQQRKEKRKGWN------KPDAFHVC 731

Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
           I SYQL+V D+  F+R KWQYMVLDEA  IK+  S RW+ LL+FN + R+LLTGTP+QNN
Sbjct: 732 IVSYQLIVQDQHSFKRKKWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRILLTGTPLQNN 791

Query: 607 MAELWALLHFIMP-TLFDSH--------EQFNEWFSKGIESHAEHGGTLNEHQ-----LN 652
           +AELW+LL+F+MP T+ D          + F +WF + ++   E GGT  +       + 
Sbjct: 792 IAELWSLLYFLMPQTVIDGQKVSGFADLDAFQQWFGRPVDKLIETGGTYEQDNETKRTVE 851

Query: 653 RLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRG 712
           +LH +L+P++LRR+K DV  ++  K E +V+CKLS RQ+  Y    ++         ++ 
Sbjct: 852 KLHQVLRPYLLRRLKADVEKQIPGKYEHIVYCKLSKRQRFLYDDFMSRAQ-------TKA 904

Query: 713 HLNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGE 752
            L     ++++N ++QLRKVCNHP+LFE     +   FGE
Sbjct: 905 TLASGNFMSIVNCLMQLRKVCNHPDLFEVRPIKTSFLFGE 944



 Score =  188 bits (478), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 94/208 (45%), Positives = 133/208 (63%), Gaps = 6/208 (2%)

Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
            D + L  D GKLQ L ILL++L+   HR L+F QMTK+L+ILE ++NY  Y Y+RLDG++
Sbjct: 1169 DKSLLQYDCGKLQKLAILLQQLKDGGHRALIFTQMTKVLDILEQFLNYHGYLYMRLDGAT 1228

Query: 1107 TIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
             I DR+ +   F     I VF+LS+R+GGLGINLT ADTVIFY+SDWNP +D Q  DR H
Sbjct: 1229 KIEDRQILTERFNSDPKITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCH 1288

Query: 1167 RLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLDD 1226
            R+GQT+DV +YR + + T+E  IL++A+QK  +  +++  G    D  +   V  L   D
Sbjct: 1289 RIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDDVIIQKGEFTTDYFSKLSVKDLFGSD 1348

Query: 1227 AQLEQKLRELPVQVKDKPKRKQPTKAIR 1254
                  + +LPV +  KP     ++AI+
Sbjct: 1349 V-----VGDLPV-IDTKPLLGSDSEAIK 1370


>sp|O13682|SWR1_SCHPO Helicase swr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
           24843) GN=swr1 PE=3 SV=1
          Length = 1288

 Score =  301 bits (772), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 156/348 (44%), Positives = 218/348 (62%), Gaps = 26/348 (7%)

Query: 406 SVAG-SGNIDLHNPSTMPV--TSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILAD 462
           S+AG S       P+  PV   + +Q P LF+G+L+EYQ  GL+WL   ++   NGILAD
Sbjct: 413 SIAGISEQRKFDEPNGSPVLHANKIQVPFLFRGTLREYQQYGLEWLTALHDSNTNGILAD 472

Query: 463 EMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQ 522
           EMGLGKTIQ +A LAHLA EK  WGP L++ P SV+ NW  E  +F P  K L Y+G  Q
Sbjct: 473 EMGLGKTIQTIALLAHLACEKENWGPHLIIVPTSVMLNWEMEFKKFLPGFKILTYYGNPQ 532

Query: 523 ERMVLRKNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSI 582
           ER   R        Y+ D  +H+ ITSYQL++ D + FRR KWQYM+LDEA  IK+  S 
Sbjct: 533 ERKEKRSG-----WYKPDT-WHVCITSYQLVLQDHQPFRRKKWQYMILDEAHNIKNFRSQ 586

Query: 583 RWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMP-------TLFDSHEQFNEWFSKG 635
           RW++LL+FN  +RLLLTGTP+QNN+ ELW+LL+F+MP       + F + + F +WFSK 
Sbjct: 587 RWQSLLNFNAEHRLLLTGTPLQNNLVELWSLLYFLMPAGVTQNNSAFANLKDFQDWFSKP 646

Query: 636 IESHAEHGGTLNEHQLN---RLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQA 692
           ++   E G  +N   +N   +LH +L+P++LRR+K +V  ++  K E +V+C+LS RQ+ 
Sbjct: 647 MDRLIEEGQDMNPEAMNTVAKLHRVLRPYLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRF 706

Query: 693 FYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFE 740
            Y    N+         +R  L     ++++N ++QLRKVCNHP L E
Sbjct: 707 LYDDFINRA-------RTREILASGNFMSIINCLMQLRKVCNHPNLHE 747



 Score =  191 bits (485), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 92/161 (57%), Positives = 119/161 (73%)

Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
            D   L  D GKLQ LD LLK L +  HRVL+F QMTK+L+ILE ++N   +RYLRLDG++
Sbjct: 982  DKRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNIHGHRYLRLDGAT 1041

Query: 1107 TIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
             I  R+ +   F +   I VF+LSTR+GGLGINLT ADTVIFY+SDWNP LD QA DR+H
Sbjct: 1042 KIEQRQILTERFNNDDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRSH 1101

Query: 1167 RLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGG 1207
            R+GQT+DV +YRLI + TVE  +L+RA+QK  + ++V+ GG
Sbjct: 1102 RIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDKIVIQGG 1142


>sp|Q4WAS9|SWR1_ASPFU Helicase swr1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
            CBS 101355 / FGSC A1100) GN=swr1 PE=3 SV=1
          Length = 1695

 Score =  301 bits (771), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/323 (45%), Positives = 204/323 (63%), Gaps = 25/323 (7%)

Query: 430  PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPF 489
            P L +G+L+EYQ  GL WL   Y   +NGILADEMGLGKTIQ +A LAHLA E  +WGP 
Sbjct: 823  PHLLRGTLREYQHYGLDWLAGLYNNHINGILADEMGLGKTIQTIALLAHLAVEHEVWGPH 882

Query: 490  LVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITS 549
            LVV P SV+ NW  E  ++CP  K + Y+G ++ER   RK       +  D  +++LITS
Sbjct: 883  LVVVPTSVILNWEMEFKKWCPGFKIMTYYGSIEERRQKRKG------WTDDTSWNVLITS 936

Query: 550  YQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAE 609
            YQL++ D++  +R  W YMVLDEA  IK+  S +W+TLL+F  R RLLLTGTP+QNN+ E
Sbjct: 937  YQLVLQDQQVLKRRNWHYMVLDEAHNIKNFRSQKWQTLLTFRTRARLLLTGTPLQNNLTE 996

Query: 610  LWALLHFIMPTLFDSH--------EQFNEWFSKGIESHAEHGGTLNEHQLNR----LHAI 657
            LW+LL F+MP+  D            F+EWF + +E   EHG    + +  R    LH I
Sbjct: 997  LWSLLFFLMPSDGDGTGIEGFADLRNFSEWFRRPVEQILEHGRETMDDETKRVVTKLHTI 1056

Query: 658  LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEK 717
            L+P++LRR+K DV  ++  K E +V+C+LS RQ+  Y      +S+A     ++  L   
Sbjct: 1057 LRPYILRRLKADVEKQMPAKYEHVVYCRLSKRQRFLYDGF---MSMA----QTKETLASG 1109

Query: 718  KILNLMNIVIQLRKVCNHPELFE 740
              L+++N ++QLRKVCNHP+LFE
Sbjct: 1110 NYLSIINCLMQLRKVCNHPDLFE 1132



 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/189 (46%), Positives = 127/189 (67%), Gaps = 1/189 (0%)

Query: 1045 SFDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLD 1103
            +F   +LL  D GKLQ LD LL+ L+A  HR L+F QMTKML+ILE ++N   +RYLRLD
Sbjct: 1366 AFPDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDILEQFLNIHGHRYLRLD 1425

Query: 1104 GSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD 1163
            G++ +  R+ +   F +   I VF+LS+R+GGLGINLT ADTVIFY+ DWNP +D Q  D
Sbjct: 1426 GTTKVEQRQILTDRFNNDDRILVFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQD 1485

Query: 1164 RAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLL 1223
            R HR+GQT+DV +YR + + T+E  IL++A+QK  +  +V+  G    D     DV  ++
Sbjct: 1486 RCHRIGQTRDVHIYRFVSEHTIESNILRKANQKRMLDDVVIQEGEFTTDYFTKLDVRDMI 1545

Query: 1224 LDDAQLEQK 1232
             ++A+ + +
Sbjct: 1546 GEEAEAQDE 1554


>sp|Q4IAK7|SWR1_GIBZE Helicase SWR1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
            9075 / NRRL 31084) GN=SWR1 PE=3 SV=1
          Length = 1691

 Score =  300 bits (767), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 149/357 (41%), Positives = 217/357 (60%), Gaps = 26/357 (7%)

Query: 396  ADTEAAMLDVSVAGSGNIDLHN----PSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNC 451
            ++T+ + LD +      +D H+    PS  P    ++ P L +G+L+EYQ  GL WL   
Sbjct: 766  SETKPSELDTASTEEMAVDKHDTSRSPSPQPSNHKIEVPFLLRGTLREYQRDGLDWLAGL 825

Query: 452  YEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPD 511
            Y    NGILADEMGLGKTIQ +A LAHLA    +WGP LV+ P SV+ NW  E  ++CP 
Sbjct: 826  YANSTNGILADEMGLGKTIQTIALLAHLACTHEVWGPHLVIVPTSVMLNWEMEFKKWCPG 885

Query: 512  LKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLD 571
             K L Y+G  +ER   R+  N       D  +++ ITSYQL++ D++ F+R +W YM+LD
Sbjct: 886  FKILAYYGSQEERKRKRQGWN------NDDIWNVCITSYQLVLQDQQVFKRRRWHYMILD 939

Query: 572  EAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTL-----FDSHE 626
            EA  IK+  S RW+TLL FN + RLLLTGTP+QNN+ ELW+LL F+MP       F   +
Sbjct: 940  EAHNIKNFKSQRWQTLLGFNTQARLLLTGTPLQNNLTELWSLLFFLMPAENGVGGFADLQ 999

Query: 627  QFNEWFSKG----IESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMV 682
            +F++WF+K     +ES  E         +++LH +L+P++LRR+K DV  ++  K E + 
Sbjct: 1000 EFHDWFAKPESQILESGREQMDDEARAIISKLHKVLRPYLLRRLKADVEKQMPAKYEHVE 1059

Query: 683  HCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
             C+LS RQ+  Y    ++        +++  LN    L+++N ++QLRKVCNHP+LF
Sbjct: 1060 FCRLSKRQRELYDGFLSRT-------DTKETLNSGNYLSIINCLMQLRKVCNHPDLF 1109



 Score =  186 bits (472), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/178 (50%), Positives = 122/178 (68%), Gaps = 3/178 (1%)

Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
            L  D GKLQ LD LL++L+A  HR L+F QMTK+L+ILE ++N   ++YLRLDG++ +  
Sbjct: 1366 LQYDCGKLQILDKLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGATKVEQ 1425

Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
            R+ +   F +   I  F+LSTR+GGLGINLT ADTVIFY+ DWNP +D Q  DR HR+GQ
Sbjct: 1426 RQILTDRFNNDPRILCFILSTRSGGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQ 1485

Query: 1171 TKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDI---LAPEDVVSLLLD 1225
            T+DV +YRL+ + T+E  IL++ASQK  +  +V+  G    D    L+  DV+S  LD
Sbjct: 1486 TRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQEGEFTTDYFNKLSVRDVLSEKLD 1543


>sp|Q4P328|SWR1_USTMA Helicase SWR1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SWR1
            PE=3 SV=1
          Length = 1830

 Score =  298 bits (764), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 207/326 (63%), Gaps = 25/326 (7%)

Query: 427  VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
            ++ P L +G L+ YQ  G +WL + Y  G+NGILADEMGLGKTIQ ++ LAHLA +K +W
Sbjct: 980  LRQPFLLRGQLRPYQQIGFEWLCSLYANGVNGILADEMGLGKTIQTISLLAHLACDKGVW 1039

Query: 487  GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
            GP LVVAP SV+ NW  E  +F P  K L Y+G  +ER   R   N +        F++ 
Sbjct: 1040 GPHLVVAPTSVMLNWEVEFKKFLPGFKILSYYGNQKERKEKRIGWNTEN------SFNVC 1093

Query: 547  ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
            ITSYQL++AD+  FRR  W Y+VLDEA  IK+  S RW+TLL FN + RLLLTGTP+QNN
Sbjct: 1094 ITSYQLVLADQHIFRRKPWVYLVLDEAHHIKNFRSQRWQTLLGFNSQRRLLLTGTPLQNN 1153

Query: 607  MAELWALLHFIMPT---------LFDSHEQFNEWFSKGIESHAEHGGTLNEH---QLNRL 654
            + +LW+L++F+MP           F + + F +WFS  ++   E G ++N+     + +L
Sbjct: 1154 LMDLWSLMYFLMPNGATELPGGGAFANMKDFQDWFSNPLDKAIEGGTSMNDETRAMVQKL 1213

Query: 655  HAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHL 714
            HA+L+P++LRR+K +V  EL +K E ++ C+LS RQ+  Y    ++         +R  L
Sbjct: 1214 HAVLRPYLLRRLKSEVEKELPSKYEHVITCRLSKRQRFLYNDFMSRA-------KTRESL 1266

Query: 715  NEKKILNLMNIVIQLRKVCNHPELFE 740
                 L+++N ++QLRKVCNHP+LFE
Sbjct: 1267 ASGNYLSIINCLMQLRKVCNHPDLFE 1292



 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 96/217 (44%), Positives = 144/217 (66%), Gaps = 4/217 (1%)

Query: 1045 SFDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLD 1103
            +F  A LL  D GKLQ LDIL++RL+   HR+L+F QMT++L+ILE ++NY  YRYLRLD
Sbjct: 1521 AFPDASLLQYDCGKLQQLDILMRRLKEGGHRILIFTQMTRVLDILESFLNYHGYRYLRLD 1580

Query: 1104 GSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD 1163
            G++ +  R+ +   F   + I  F+LSTR+GGLGINLT ADTV+FY+ DWN  ++ Q MD
Sbjct: 1581 GATKVESRQALTEQFNRDARISAFILSTRSGGLGINLTGADTVLFYDLDWNAAIEAQCMD 1640

Query: 1164 RAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLL 1223
            RAHR+GQT+DV +YR + + T+EE +L++A+QK  +  +V+  G    + LA     + +
Sbjct: 1641 RAHRIGQTRDVHIYRFVTEHTIEENMLRKANQKRLLDNVVIQQGEFNTETLAKRLDWTDM 1700

Query: 1224 LDDAQLEQKLRELPVQVKDKPKRKQPTKAIRLDAEGD 1260
            LD++    K+ ++ V V D+    +  ++  L AE D
Sbjct: 1701 LDES---GKIGDVEVVVADQGVGARDVESAFLQAEDD 1734


>sp|Q6CJ38|SWR1_KLULA Helicase SWR1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
            DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SWR1 PE=3
            SV=1
          Length = 1572

 Score =  298 bits (763), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 27/332 (8%)

Query: 423  VTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEE 482
              S V  P L +G+L+ YQ +GL WL + Y    NGILADEMGLGKTIQ ++ LA+LA E
Sbjct: 751  AVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACE 810

Query: 483  KNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAG 542
            K  WGP L+V P SVL NW  E  RF P  K L Y+G  Q+R   RK  N      +   
Sbjct: 811  KENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWN------KPDA 864

Query: 543  FHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTP 602
            FH+ ITSYQL+V D+  F+R KWQYM+LDEA  IK+  S RW+ LL+FN   RLLLTGTP
Sbjct: 865  FHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTP 924

Query: 603  IQNNMAELWALLHFIMP---------TLFDSHEQFNEWFSKGIESHAEHGGTLNEHQ--- 650
            +QNN+AELW+LL+F+MP         + F   + F +WF + ++   E G    + +   
Sbjct: 925  LQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETK 984

Query: 651  --LNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFD 708
              +++LH +L+P++LRR+K DV  ++  K E +++C+LS RQ+  Y    ++        
Sbjct: 985  KTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQ------ 1038

Query: 709  NSRGHLNEKKILNLMNIVIQLRKVCNHPELFE 740
             ++  L     ++++N ++QLRKVCNHP+LFE
Sbjct: 1039 -TKETLASGNFMSIINCLMQLRKVCNHPDLFE 1069



 Score =  187 bits (476), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/287 (38%), Positives = 158/287 (55%), Gaps = 24/287 (8%)

Query: 1013 HQLIQEIDSELPVAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAEN 1072
            H L+ ++ S   +  P  QL  ++  + P     D + L  D GKLQ L  LL+ L+   
Sbjct: 1275 HHLVSQMRS---LENPFHQLQTKLSVAFP-----DKSLLQYDCGKLQKLAQLLQNLKDNG 1326

Query: 1073 HRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTR 1132
            HR L+F QMTK+L+ILE ++N+  Y Y+RLDG++ I DR+ +   F     I VF+LS+R
Sbjct: 1327 HRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSR 1386

Query: 1133 AGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQR 1192
            +GGLGINLT ADTVIFY+SDWNP +D Q  DR HR+GQT+DV +YR +   T+E  IL++
Sbjct: 1387 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKK 1446

Query: 1193 ASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLDDA-----------QLEQKLRELPVQVK 1241
            A+QK  +  +V+  G    D      V  LL  +A           Q ++ L +L  Q +
Sbjct: 1447 ANQKRHLDNVVIQTGDFTTDYFTKLSVKDLLGAEAPEDIPDDKPLLQDQKNLNKLLAQAE 1506

Query: 1242 DKPKRKQPTKAIRLDAEGDASLEDLTNVEAQVPGQEPSPDLEKASSS 1288
            D+   K    A+R   E +   ED    E  V  Q+ + D E    S
Sbjct: 1507 DEDDAKAAKSALR---EVNVDNEDFQ--EGSVAAQDGNSDNENNEDS 1548


>sp|Q5ARK3|SWR1_EMENI Helicase swr1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
            CBS 112.46 / NRRL 194 / M139) GN=swr1 PE=3 SV=2
          Length = 1698

 Score =  298 bits (763), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 145/323 (44%), Positives = 203/323 (62%), Gaps = 25/323 (7%)

Query: 430  PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPF 489
            P L +G+L+EYQ  GL WL   Y   +NGILADEMGLGKTIQ +A LAHLA E  +WGP 
Sbjct: 818  PHLLRGTLREYQHFGLDWLAGLYSNHINGILADEMGLGKTIQTIALLAHLAVEHGVWGPH 877

Query: 490  LVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITS 549
            LVV P SV+ NW  E  ++CP  K + Y+G  +ER   R      R +  D  +++LITS
Sbjct: 878  LVVVPTSVILNWEMEFKKWCPGFKIMTYYGNQEERRQKR------RGWMDDNSWNVLITS 931

Query: 550  YQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAE 609
            YQL++ D++  +R  W YM+LDEA  IK+  S RW+ LL+F  R RLLLTGTP+QNN+ E
Sbjct: 932  YQLVLQDQQVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRARLLLTGTPLQNNLTE 991

Query: 610  LWALLHFIMPTLFDSH--------EQFNEWFSKGIESHAEHG-GTLNEHQ---LNRLHAI 657
            LW+LL F+MPT  D            F+EWF + +E   EHG  T+++     + +LH +
Sbjct: 992  LWSLLFFLMPTDGDEAGIEGFADLRNFSEWFRRPVEQILEHGRETMDDEAKQVVTKLHTV 1051

Query: 658  LKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNEK 717
            L+P++LRR+K DV  ++  K E +V+C+LS RQ+  Y    ++         ++  L   
Sbjct: 1052 LRPYILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLYDGFMSRA-------QTKETLASG 1104

Query: 718  KILNLMNIVIQLRKVCNHPELFE 740
              L+++N ++QLRKVCNHP+LFE
Sbjct: 1105 NYLSIINCLMQLRKVCNHPDLFE 1127



 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 85/182 (46%), Positives = 122/182 (67%)

Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
            L  D GKLQ LD LL+ L+A  HR L+F QMTKML++LE ++N   +RYLRLDG++ +  
Sbjct: 1368 LQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNIHGHRYLRLDGTTKVEQ 1427

Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
            R+ +   F + + I  F+LS+R+GGLGINLT ADTVIFY+ DWNP +D Q  DR HR+GQ
Sbjct: 1428 RQILTDRFNNDNRILAFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQ 1487

Query: 1171 TKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLDDAQLE 1230
            T+DV +YR + + T+E  IL++A+QK  +  +V+  G    D     DV  ++ +D  L+
Sbjct: 1488 TRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGEFTTDYFTKLDVRDMIGNDEALK 1547

Query: 1231 QK 1232
             +
Sbjct: 1548 DE 1549


>sp|Q759G7|SWR1_ASHGO Helicase SWR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
           FGSC 9923 / NRRL Y-1056) GN=SWR1 PE=3 SV=2
          Length = 1486

 Score =  298 bits (762), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 148/328 (45%), Positives = 207/328 (63%), Gaps = 28/328 (8%)

Query: 427 VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
           V  P L +G+L+ YQ +GL WL + Y    NGILADEMGLGKTIQ +A LA+LA EK  W
Sbjct: 661 VPVPPLLRGTLRTYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTIALLAYLACEKENW 720

Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
           GP L++ P SVL NW  E  RF P  K L Y+G  Q+R   R+  N     + DA FH+ 
Sbjct: 721 GPHLIIVPTSVLLNWEMEFKRFAPGFKVLSYYGSPQQRKEKRRGWN-----KLDA-FHVC 774

Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
           ITSYQL+V D+  F+R KWQYM+LDEA  IK+  S RW+ LL+FN R RLLLTGTP+QNN
Sbjct: 775 ITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFKSTRWQALLNFNTRRRLLLTGTPLQNN 834

Query: 607 MAELWALLHFIMP---------TLFDSHEQFNEWFSKGIE-----SHAEHGGTLNEHQLN 652
           +AELW+LL+F+MP         + F   + F +WF K ++     + +EH        ++
Sbjct: 835 IAELWSLLYFLMPQTALENGKISGFADLDAFQQWFGKPVDKIIAANDSEHDDE-TRRTVS 893

Query: 653 RLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRG 712
           +LH +L+P++LRR+K DV  ++  K E +++C+LS RQ+  Y    ++         ++ 
Sbjct: 894 KLHQVLRPYLLRRLKADVEKQMPAKYEHILYCRLSKRQRFLYDDFMSRA-------QTKA 946

Query: 713 HLNEKKILNLMNIVIQLRKVCNHPELFE 740
            L     ++++N ++QLRKVCNHP+LFE
Sbjct: 947 TLASGNFMSIINCLMQLRKVCNHPDLFE 974



 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 107/248 (43%), Positives = 147/248 (59%), Gaps = 15/248 (6%)

Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
            D + L  D GKLQ+L +LL+RL+ E HR L+F QMTK+L+ILE ++NY  Y Y+RLDG++
Sbjct: 1208 DKSLLQYDCGKLQSLAVLLRRLKEEGHRALIFTQMTKVLDILEQFLNYHGYLYMRLDGAT 1267

Query: 1107 TIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
             I DR+ +   F     I VF+LS+R+GGLGINLT ADTVIFY+SDWNP +D Q  DR H
Sbjct: 1268 KIEDRQILTERFNTDPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCH 1327

Query: 1167 RLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLDD 1226
            R+GQT+DV +YR + + T+E  IL++A+QK  +  +V+  G    D  +   V  LL  D
Sbjct: 1328 RIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNIVIQKGEFTTDYFSRLSVKDLLGSD 1387

Query: 1227 AQL----EQKLRELPVQVKDKPKRKQ---------PTKAIRLDAEGDASLEDLTNVEAQV 1273
                   E+ L E P    D  K ++           KA RL A  +  ++D    E+  
Sbjct: 1388 ETEEIADERPLLEDPATTADSKKLERLLAQAEDEDDVKAARL-AMKEVDVDDRDFRESST 1446

Query: 1274 PGQEPSPD 1281
                PSPD
Sbjct: 1447 CAN-PSPD 1453


>sp|Q59U81|SWR1_CANAL Helicase SWR1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
            GN=SWR1 PE=3 SV=1
          Length = 1641

 Score =  297 bits (760), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 170/478 (35%), Positives = 261/478 (54%), Gaps = 71/478 (14%)

Query: 381  LTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDL-----HNPSTMPVTS-----TVQTP 430
            +++ F+ E  +   ++D E     + V G+G ID       + S + + +      V  P
Sbjct: 762  ISSNFENESDESMNSSDRE-----LEVNGNGKIDKIASTDEDDSNVEIVNGSKVKDVPIP 816

Query: 431  ELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFL 490
             L +G+L+ YQ +GL WL + Y    NGILADEMGLGKTIQ ++ LA+LA E + WGP L
Sbjct: 817  SLLRGTLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGPHL 876

Query: 491  VVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHILITSY 550
            ++ P SV+ NW  E  +F P  K L Y+G  Q+R   RK  N      +   FH+ ITSY
Sbjct: 877  IIVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRKGWN------KPDAFHVCITSY 930

Query: 551  QLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAEL 610
            QL+V D++ F+R +W YM+LDEA  IK+  S RW+ LL+FN  NRLLLTGTP+QNN+ EL
Sbjct: 931  QLVVQDQQSFKRRRWTYMILDEAHNIKNFRSTRWRALLNFNTENRLLLTGTPLQNNLMEL 990

Query: 611  WALLHFIMPTL---------FDSHEQFNEWFSKGI-----ESHAEHGGTLNEHQ------ 650
            W+LL+F+MP+          F + + F +WF K +     ++ A +   ++E++      
Sbjct: 991  WSLLYFLMPSSKVNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERTTQKM 1050

Query: 651  -------LNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISL 703
                   + RLH +L+P++LRR+KKDV  ++  K E +V+C+LS RQ+  Y    ++   
Sbjct: 1051 DEETRNTVARLHQVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRAK- 1109

Query: 704  AGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFE-RNEGSSYLYFGEIP------NS 756
                  ++  L     L+++N ++QLRKVCNHP+LFE R   +S+     IP      N 
Sbjct: 1110 ------TKETLASGNFLSIINCLMQLRKVCNHPDLFEVRPIVTSFAMPRSIPSYYQSTNE 1163

Query: 757  LLPPPFGELEDISFSGVRNPIEYKIPKIVHQEILQSSEILCSAVGHGISRELFQKRFN 814
            L+   F + E +SF  +   +               +  +C + G  ++ E FQ + N
Sbjct: 1164 LVKRQFNKDETVSFQALNLDV---------TGCENMNYFVCQSTGKLMTTEPFQDQIN 1212



 Score =  184 bits (466), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 100/254 (39%), Positives = 143/254 (56%), Gaps = 14/254 (5%)

Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
            D   L  D GKLQ L  LL+ L ++ HR L+F QMTK+L+ILE ++N   YRY+RLDG++
Sbjct: 1357 DKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGAT 1416

Query: 1107 TIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
             I DR+ +   F     I VF+LSTR+GGLGINLT ADTVIFY+SDWNP +D Q  DR H
Sbjct: 1417 KIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCH 1476

Query: 1167 RLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLD- 1225
            R+GQ +DV +YR + + T+E  I+++A+QK  +  +V+  G    D      V  L+ D 
Sbjct: 1477 RIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQEGEFTTDYFGKFSVRDLVSDS 1536

Query: 1226 -----------DAQLEQKLRELPVQVKDKPKRKQPTKAIRLDAEGDASLEDLTNVEAQVP 1274
                       D   + K+  +  Q +D+  R     A++  A  D   ++ T   +   
Sbjct: 1537 NIGKEITDRTIDFSGDAKMGNVLAQAEDEEDRVAAGAALKEVAIDDDDFKEET--RSATT 1594

Query: 1275 GQEPSPDLEKASSS 1288
            G  P+P    A S+
Sbjct: 1595 GATPAPTETNALST 1608


>sp|Q6BKC2|SWR1_DEBHA Helicase SWR1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
            JCM 1990 / NBRC 0083 / IGC 2968) GN=SWR1 PE=3 SV=2
          Length = 1616

 Score =  297 bits (760), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 209/342 (61%), Gaps = 41/342 (11%)

Query: 427  VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
            V  P L +G+L+ YQ +GL WL + Y  G NGILADEMGLGKTIQ ++ LA+LA E +IW
Sbjct: 771  VPLPPLLRGTLRPYQKQGLNWLASLYNNGTNGILADEMGLGKTIQTISLLAYLAAEHHIW 830

Query: 487  GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
            GP L+V P SV+ NW  E  +F P  K L Y+G  Q+R   RK  N      +   FH+ 
Sbjct: 831  GPHLIVVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRKGWN------KPNAFHVC 884

Query: 547  ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
            ITSYQL+V D + F+R +W+YM+LDEA  IK+  S RW+ LL+FN  NRLLLTGTP+QNN
Sbjct: 885  ITSYQLVVHDHQSFKRRRWRYMILDEAHNIKNFRSARWRALLNFNTENRLLLTGTPLQNN 944

Query: 607  MAELWALLHFIMPTL---------FDSHEQFNEWFSKGIE------SHAEHGGTLNEHQ- 650
            + ELW+LL+F+MP+          F + E F  WF + ++      S+      ++E+  
Sbjct: 945  LMELWSLLYFLMPSSKVNQAMPDGFANLEDFQTWFGRPVDKILEKTSNGTSSDVIDENDK 1004

Query: 651  ------------LNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIK 698
                        ++RLH +L+P++LRR+KKDV  ++  K E +++C+LS RQ+  Y    
Sbjct: 1005 TTQRMDEETRNTVSRLHQVLRPYLLRRLKKDVEKQMPGKYEHIIYCRLSKRQRYLYDDFM 1064

Query: 699  NKISLAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFE 740
            ++         ++  L     L+++N ++QLRKVCNHP+LFE
Sbjct: 1065 SRAQ-------TKETLASGNFLSIINCLMQLRKVCNHPDLFE 1099



 Score =  191 bits (484), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/296 (38%), Positives = 157/296 (53%), Gaps = 28/296 (9%)

Query: 1047 DPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSS 1106
            D + L  D GKLQ L  LL+ L A  HR L+F QMTK+L+ILE ++N   YRY+RLDG++
Sbjct: 1323 DKSLLQFDCGKLQKLATLLQDLTANGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGAT 1382

Query: 1107 TIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAH 1166
             I DR+ +   F   S I VF+LSTR+GGLGINLT ADTVIFY+SDWNP +D Q  DR H
Sbjct: 1383 KIEDRQLLTEKFNRDSKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCH 1442

Query: 1167 RLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLD- 1225
            R+GQ++DV +YR + + T+E  IL++A+QK  +  +V+  G    D      V  L+ D 
Sbjct: 1443 RIGQSRDVHIYRFVSEYTIESNILRKANQKRQLDNVVIQEGEFTTDYFGKFSVKDLVNDA 1502

Query: 1226 ------DAQLE---QKLRELPVQVKDKPKRKQPTKAIRLDAEGDASLEDLTNVEAQ--VP 1274
                  D  LE     +  +  Q +D+  R     A++  A  D   ++ +        P
Sbjct: 1503 EVADIPDKPLEPAYGNVENVLAQAEDEDDRVAANAAMKEVAIDDEDFDEESKAATNTATP 1562

Query: 1275 GQEPSPDLEKASSSNKKRKAASGKQTTPKARSTQKTNEPASTVMDYELDDPLQAAD 1330
             Q P PD            A SG        ST K N    ++ D + +D +   D
Sbjct: 1563 SQTPGPDT-----------AGSG-----IVDSTVKINNKTDSLEDVDYEDGVSHVD 1602


>sp|Q05471|SWR1_YEAST Helicase SWR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
            S288c) GN=SWR1 PE=1 SV=1
          Length = 1514

 Score =  296 bits (759), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 147/328 (44%), Positives = 203/328 (61%), Gaps = 27/328 (8%)

Query: 427  VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
            V  P L +G+L+ YQ +GL WL + Y    NGILADEMGLGKTIQ ++ LA+LA EK  W
Sbjct: 686  VPVPSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYLACEKENW 745

Query: 487  GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
            GP L+V P SVL NW  E  RF P  K L Y+G  Q+R   RK  N      +   FH+ 
Sbjct: 746  GPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKRKGWN------KPDAFHVC 799

Query: 547  ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
            I SYQL+V D+  F+R +WQYMVLDEA  IK+  S RW+ LL+FN + RLLLTGTP+QNN
Sbjct: 800  IVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNN 859

Query: 607  MAELWALLHFIMP-TLFDSH--------EQFNEWFSKGIESHAEHGGTLNEHQ-----LN 652
            +AELW+LL+F+MP T+ D          + F +WF + ++   E G    + +     + 
Sbjct: 860  LAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDKETKKTVA 919

Query: 653  RLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRG 712
            +LH +L+P++LRR+K DV  ++  K E +V+CKLS RQ+  Y    ++         ++ 
Sbjct: 920  KLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQ-------TKA 972

Query: 713  HLNEKKILNLMNIVIQLRKVCNHPELFE 740
             L     ++++N ++QLRKVCNHP LFE
Sbjct: 973  TLASGNFMSIVNCLMQLRKVCNHPNLFE 1000



 Score =  190 bits (483), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 93/199 (46%), Positives = 130/199 (65%), Gaps = 5/199 (2%)

Query: 1025 VAKPALQLTYQIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKM 1084
            V+ P  QL  ++  + P     D + L  D GKLQ L ILL++L+   HR L+F QMTK+
Sbjct: 1220 VSNPLHQLQTKLTIAFP-----DKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKV 1274

Query: 1085 LNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAAD 1144
            L++LE ++NY  Y Y+RLDG++ I DR+ +   F   S I VF+LS+R+GGLGINLT AD
Sbjct: 1275 LDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGAD 1334

Query: 1145 TVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVM 1204
            TVIFY+SDWNP +D Q  DR HR+GQT+DV +YR + + T+E  IL++A+QK  +  +V+
Sbjct: 1335 TVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVI 1394

Query: 1205 TGGHVQGDILAPEDVVSLL 1223
              G    D  +   V  LL
Sbjct: 1395 QEGDFTTDYFSKLSVRDLL 1413


>sp|C0H4W3|HEPF1_PLAF7 Probable ATP-dependent helicase PF08_0048 OS=Plasmodium falciparum
           (isolate 3D7) GN=PF08_0048 PE=3 SV=1
          Length = 2082

 Score =  294 bits (753), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 149/328 (45%), Positives = 205/328 (62%), Gaps = 28/328 (8%)

Query: 420 TMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHL 479
            M      + P + K +L++YQ  GL WL+  Y+  +NGILADEMGLGKT+Q ++ L++L
Sbjct: 645 NMDEKHLTKIPPIIKATLRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYL 704

Query: 480 AEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL--Y 537
           A   NIWGP LV+ P S+L NW  E+ RFCP  K L Y+G   ER         KR+  +
Sbjct: 705 AYYFNIWGPHLVIVPTSILINWEIELKRFCPCFKILSYYGNQNERY-------KKRVGWF 757

Query: 538 RRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLL 597
            +D+ FHI I+SY  +V D   F+R +W+Y++LDEA  IK+ N+ RW  +LS    N LL
Sbjct: 758 NKDS-FHICISSYSTVVKDHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLL 816

Query: 598 LTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSK----GIE-SHAEHGGTLNEHQLN 652
           +TGTP+QN++ ELW+LLHF+MP +F SH  F EWFS      IE S   H   L    ++
Sbjct: 817 ITGTPLQNSLEELWSLLHFLMPNIFTSHLDFKEWFSDPLNLAIEKSKIHHSKEL----ID 872

Query: 653 RLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFY-QAIKNKISLAGLFDNSR 711
           RLH +++P++LRR+KK+V  E+  K E ++ CKL+ RQQ  Y + I NK        N +
Sbjct: 873 RLHTVIRPYILRRLKKNVEKEMPNKYEHIIKCKLTRRQQILYDEFINNK--------NVQ 924

Query: 712 GHLNEKKILNLMNIVIQLRKVCNHPELF 739
             LN    + LMNI+IQLRKVCNH +LF
Sbjct: 925 NTLNTGNYIGLMNILIQLRKVCNHCDLF 952



 Score =  170 bits (430), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 75/157 (47%), Positives = 110/157 (70%)

Query: 1055 SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM 1114
            SGKL  L+ LL + + E ++ LLF Q  KML+ILE ++N+  Y ++RLDGS+ +  R+ +
Sbjct: 1767 SGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQRQKI 1826

Query: 1115 VRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1174
            V  F +   IF+F+ STR+G +GINLTAA+ VIFY++DWNP++D QAMDR HR+GQTKDV
Sbjct: 1827 VTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQTKDV 1886

Query: 1175 TVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQG 1211
             V+R +C+ TVEE I ++  QK  +  + +  G+   
Sbjct: 1887 HVFRFVCEYTVEENIWKKQLQKRKLDNICINMGNFNN 1923


>sp|Q6CA87|SWR1_YARLI Helicase SWR1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
            GN=SWR1 PE=3 SV=1
          Length = 1772

 Score =  291 bits (746), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 148/338 (43%), Positives = 210/338 (62%), Gaps = 27/338 (7%)

Query: 413  IDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQA 472
            +D   P   P    V+ P L +G+L+ YQ  GL+WL   Y    NGILADEMGLGKTIQ 
Sbjct: 888  LDRVTPERAPA---VEPPFLLRGTLRAYQQLGLEWLAGLYNNDTNGILADEMGLGKTIQT 944

Query: 473  MAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNIN 532
            ++ L++LA E +IWGP L++ P SV+ NW  E  RF P  K + Y+G   +R   R+  N
Sbjct: 945  ISLLSYLACEHHIWGPHLIIVPTSVMLNWEMEFKRFAPGFKVMTYYGNPVQRREKRRGWN 1004

Query: 533  PKRLYRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNC 592
                  ++  +H+ ITSYQL++ D   FRR +W YM+LDEA  IK+  S RW++LL FN 
Sbjct: 1005 ------KEDTWHVCITSYQLVLQDLFAFRRKRWHYMILDEAHNIKNFRSQRWQSLLHFNT 1058

Query: 593  RNRLLLTGTPIQNNMAELWALLHFIMPTL--------FDSHEQFNEWFSKGIESHAEHGG 644
              RLLLTGTP+QNN+ ELW+LL+F+MP+         F + + F EWFS+ I+   E GG
Sbjct: 1059 VRRLLLTGTPLQNNLMELWSLLYFLMPSSRNQMDMPGFANLKDFQEWFSRPIDKMVE-GG 1117

Query: 645  TLNEHQ--LNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKIS 702
               E +  +++LH IL+P++LRR+KKDV  ++  K E +V+C+LS RQ+  Y    ++  
Sbjct: 1118 VDEEAKTTVSKLHQILRPYLLRRLKKDVEKQMPAKYEHVVYCRLSKRQRYLYDDFMSRA- 1176

Query: 703  LAGLFDNSRGHLNEKKILNLMNIVIQLRKVCNHPELFE 740
                   +R  L     L+++N ++QLRKVCNHP+LFE
Sbjct: 1177 ------QTRETLKTGNFLSIINCLMQLRKVCNHPDLFE 1208



 Score =  177 bits (448), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 88/186 (47%), Positives = 123/186 (66%), Gaps = 4/186 (2%)

Query: 1045 SFDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLD 1103
            +F   +LL  D GKLQ L  LL+ L A  HR L+F QMTK+L++LE ++N    RY+RLD
Sbjct: 1457 AFPDKRLLQYDCGKLQRLATLLQDLIAGGHRALIFTQMTKVLDVLEQFLNIHGLRYMRLD 1516

Query: 1104 GSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD 1163
            G++ I  R+ +   F     I VF+LSTR+GGLGINLT ADTVIFY+SDWNP++D Q  D
Sbjct: 1517 GATKIEQRQLLTERFNTDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPSMDKQCQD 1576

Query: 1164 RAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDI---LAPEDVV 1220
            R HR+GQT+DV +YR + + T+E  IL++A+QK  +  +V+  G    D    ++  D++
Sbjct: 1577 RCHRIGQTRDVHIYRFVSEHTIESNILKKANQKQILDNVVIQDGEFTTDYFNKMSVHDML 1636

Query: 1221 SLLLDD 1226
             L  DD
Sbjct: 1637 GLEPDD 1642


>sp|Q7S133|SWR1_NEUCR Helicase swr-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
            CBS 708.71 / DSM 1257 / FGSC 987) GN=swr-1 PE=3 SV=1
          Length = 1845

 Score =  291 bits (744), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 171/452 (37%), Positives = 247/452 (54%), Gaps = 38/452 (8%)

Query: 306  NFLIQQTELY--SHFMQNKSSSQPS-EVLPVGNDKP----NDQELLLSSSEFEPGEEEDP 358
            +FL   + L   +  +Q+++ + P+ E +  G D P       + L   +   P  E  P
Sbjct: 812  DFLTNDSSLKYPNEIVQSENQTLPAKESVEAGGDLPMVDAPSTDDLQRETAAAPSLEAPP 871

Query: 359  EEAELKKEALKAAQNAVSKQKMLTNTFDTECSKLREAADTEAAMLDVSVAGSGNIDLHNP 418
                  +E + A       Q     T DT+ + +    DT  + L VSV      D    
Sbjct: 872  NTRHDSQETVAATDMQSQSQTQSPKTTDTKPTDV----DTPHSELAVSVQKP---DSRQS 924

Query: 419  STMPVTSTVQT--PELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFL 476
            S  P T TV+T  P L +G+L+EYQ  GL WL   Y    NGILADEMGLGKTIQ +A L
Sbjct: 925  SPQPTTPTVKTEIPFLLRGTLREYQHHGLDWLAGLYANNTNGILADEMGLGKTIQTIALL 984

Query: 477  AHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRL 536
            AHLA    +WGP LV+ P SV+ NW  E  ++CP  K L Y+G  +ER   R+  N    
Sbjct: 985  AHLACHHEVWGPHLVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKRQGWN---- 1040

Query: 537  YRRDAGFHILITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRL 596
               D  +++ ITSYQ+++ D++ FRR +W YM+LDEA  IK+  S RW+TLL FN + RL
Sbjct: 1041 --NDDVWNVCITSYQMVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTQARL 1098

Query: 597  LLTGTPIQNNMAELWALLHFIMP-----TLFDSHEQFNEWF----SKGIESHAEHGGTLN 647
            LLTGTP+QNN+ ELW+LL+F+ P       F    +F+ WF    S+ +ES  E      
Sbjct: 1099 LLTGTPLQNNLTELWSLLYFLAPPENGEGGFVDLTEFHNWFARPESQILESGREQLDDEA 1158

Query: 648  EHQLNRLHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLF 707
               + +LH +L+P++LRR+K DV  ++  K E +  C+LS RQ+  Y    ++       
Sbjct: 1159 RAIIAKLHKVLRPYLLRRLKADVEKQMPAKYEHVEFCRLSKRQRELYDGFLSRA------ 1212

Query: 708  DNSRGHLNEKKILNLMNIVIQLRKVCNHPELF 739
             ++R  L     ++++N ++QLRKVCNHP+LF
Sbjct: 1213 -DTRETLQSGNYMSIINCLMQLRKVCNHPDLF 1243



 Score =  186 bits (471), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 84/162 (51%), Positives = 114/162 (70%)

Query: 1051 LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMD 1110
            L  D GKLQ LD LL++L+A  HR L+F QMTK+L+ILE ++N   ++YLRLDG++ +  
Sbjct: 1501 LQYDCGKLQALDKLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGATKVEQ 1560

Query: 1111 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1170
            R+ +   F H   I  F+LSTR+GGLGINLT ADTVIFY+ DWNP +D Q  DR HR+GQ
Sbjct: 1561 RQILTDRFNHDPRILCFILSTRSGGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQ 1620

Query: 1171 TKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGD 1212
            T+DV +YRL+ + T+E  IL++ASQK  +  +V+  G    D
Sbjct: 1621 TRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQEGEFTTD 1662


>sp|P0CO18|SWR1_CRYNJ Helicase SWR1 OS=Cryptococcus neoformans var. neoformans serotype D
           (strain JEC21 / ATCC MYA-565) GN=SWR1 PE=3 SV=1
          Length = 1246

 Score =  290 bits (743), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 143/327 (43%), Positives = 204/327 (62%), Gaps = 26/327 (7%)

Query: 427 VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
           V+ P L +G+L+ YQ  GL+WL + +   +NGILADEMGLGKTIQ +A L HLA +K +W
Sbjct: 383 VRQPFLLRGTLRPYQQAGLEWLASLWSNNMNGILADEMGLGKTIQTIALLGHLACDKGVW 442

Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
           G  L++ P SV+ NW  E  +F P +K L Y+G  +ER   R        +  +  + + 
Sbjct: 443 GQHLIIVPTSVILNWEMEFKKFLPGMKVLTYYGNQKERKEKRVG------WHTENTWQVC 496

Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
           ITSYQ+++AD+  FRR  W YM+LDEA  IK+  S RW+TLL F  + RLLLTGTP+QNN
Sbjct: 497 ITSYQIVLADQHIFRRKNWCYMILDEAHNIKNFRSQRWQTLLGFKAQRRLLLTGTPLQNN 556

Query: 607 MAELWALLHFIMP----------TLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLN---R 653
           + ELW+LL+F+MP            F +H++F EWFS  ++   E G  ++E  L    +
Sbjct: 557 LMELWSLLYFLMPGGIGADATAVVGFANHKEFMEWFSNPMDKAIETGDAMDEETLETVAK 616

Query: 654 LHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGH 713
           LH +L+PF+LRR+K +V ++L  K E +V+C+LS RQ+  Y    ++ S       +   
Sbjct: 617 LHTLLRPFILRRLKSEVETQLPGKFEHVVYCRLSKRQRFLYDEFMSRAS-------THEA 669

Query: 714 LNEKKILNLMNIVIQLRKVCNHPELFE 740
           L     L +MN ++QLRKVCNHP+LFE
Sbjct: 670 LTTGGYLGVMNTLMQLRKVCNHPDLFE 696



 Score =  186 bits (471), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/169 (51%), Positives = 123/169 (72%), Gaps = 1/169 (0%)

Query: 1045 SFDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLD 1103
            +F  A LL  D GKLQ L  +L+ L++E HRVL+F QMT++L+ILE ++++  +RYLRLD
Sbjct: 926  AFPDASLLQYDCGKLQKLFEMLRDLKSEGHRVLIFTQMTRVLDILEMFLSHNGHRYLRLD 985

Query: 1104 GSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD 1163
            GS+ I DR+ +   F   S IFVF+ S+R+GG+GINLT ADTV FY+SDWNP++D Q MD
Sbjct: 986  GSTKIEDRQVLTERFNSDSRIFVFIASSRSGGVGINLTGADTVFFYDSDWNPSMDRQCMD 1045

Query: 1164 RAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGD 1212
            RAHR+GQT++V +YR +   TVEE +L++A QK  + ++V+  G    D
Sbjct: 1046 RAHRIGQTREVHIYRFVSSHTVEENMLRKAEQKRLLDKMVIQEGGFNND 1094


>sp|P0CO19|SWR1_CRYNB Helicase SWR1 OS=Cryptococcus neoformans var. neoformans serotype D
           (strain B-3501A) GN=SWR1 PE=3 SV=1
          Length = 1246

 Score =  290 bits (743), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 143/327 (43%), Positives = 204/327 (62%), Gaps = 26/327 (7%)

Query: 427 VQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 486
           V+ P L +G+L+ YQ  GL+WL + +   +NGILADEMGLGKTIQ +A L HLA +K +W
Sbjct: 383 VRQPFLLRGTLRPYQQAGLEWLASLWSNNMNGILADEMGLGKTIQTIALLGHLACDKGVW 442

Query: 487 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHIL 546
           G  L++ P SV+ NW  E  +F P +K L Y+G  +ER   R        +  +  + + 
Sbjct: 443 GQHLIIVPTSVILNWEMEFKKFLPGMKVLTYYGNQKERKEKRVG------WHTENTWQVC 496

Query: 547 ITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNN 606
           ITSYQ+++AD+  FRR  W YM+LDEA  IK+  S RW+TLL F  + RLLLTGTP+QNN
Sbjct: 497 ITSYQIVLADQHIFRRKNWCYMILDEAHNIKNFRSQRWQTLLGFKAQRRLLLTGTPLQNN 556

Query: 607 MAELWALLHFIMP----------TLFDSHEQFNEWFSKGIESHAEHGGTLNEHQLN---R 653
           + ELW+LL+F+MP            F +H++F EWFS  ++   E G  ++E  L    +
Sbjct: 557 LMELWSLLYFLMPGGIGADATAVVGFANHKEFMEWFSNPMDKAIETGDAMDEETLETVAK 616

Query: 654 LHAILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGH 713
           LH +L+PF+LRR+K +V ++L  K E +V+C+LS RQ+  Y    ++ S       +   
Sbjct: 617 LHTLLRPFILRRLKSEVETQLPGKFEHVVYCRLSKRQRFLYDEFMSRAS-------THEA 669

Query: 714 LNEKKILNLMNIVIQLRKVCNHPELFE 740
           L     L +MN ++QLRKVCNHP+LFE
Sbjct: 670 LTTGGYLGVMNTLMQLRKVCNHPDLFE 696



 Score =  186 bits (471), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/169 (51%), Positives = 123/169 (72%), Gaps = 1/169 (0%)

Query: 1045 SFDPAKLLT-DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLD 1103
            +F  A LL  D GKLQ L  +L+ L++E HRVL+F QMT++L+ILE ++++  +RYLRLD
Sbjct: 926  AFPDASLLQYDCGKLQKLFEMLRDLKSEGHRVLIFTQMTRVLDILEMFLSHNGHRYLRLD 985

Query: 1104 GSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMD 1163
            GS+ I DR+ +   F   S IFVF+ S+R+GG+GINLT ADTV FY+SDWNP++D Q MD
Sbjct: 986  GSTKIEDRQVLTERFNSDSRIFVFIASSRSGGVGINLTGADTVFFYDSDWNPSMDRQCMD 1045

Query: 1164 RAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGD 1212
            RAHR+GQT++V +YR +   TVEE +L++A QK  + ++V+  G    D
Sbjct: 1046 RAHRIGQTREVHIYRFVSSHTVEENMLRKAEQKRLLDKMVIQEGGFNND 1094


>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
            OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
            GN=snf22 PE=1 SV=2
          Length = 1680

 Score =  273 bits (697), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 139/324 (42%), Positives = 204/324 (62%), Gaps = 25/324 (7%)

Query: 427  VQTPELF-KGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 485
            V+ P++F  G+LK+YQLKGL+W+++ Y   LNGILADEMGLGKTIQ +AF+ +L E+KN 
Sbjct: 858  VEQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQ 917

Query: 486  WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERMVLRKNINPKRLYRRDAGFHI 545
             GPFL++ P S L NW  E  ++ P +K + Y G  Q R  L+  I       R + F++
Sbjct: 918  QGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQI-------RSSNFNV 970

Query: 546  LITSYQLLVADEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLS-FNCRNRLLLTGTPIQ 604
            L+T+++ ++ D     R+KW +M++DE   IK++ S    TL + ++ + RL+LTGTP+Q
Sbjct: 971  LLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQ 1030

Query: 605  NNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHAEHGGT----LNEHQ----LNRLHA 656
            NN+ ELWALL+F++P +F+S + F+EWF+      A  GG     LNE +    + RLH 
Sbjct: 1031 NNLPELWALLNFVLPKIFNSIKSFDEWFNTPF---ANTGGQDKIGLNEEEALLIIKRLHK 1087

Query: 657  ILKPFMLRRVKKDVISELTTKTEVMVHCKLSSRQQAFYQAIKNKISLAGLFDNSRGHLNE 716
            +L+PF+ RR+KKDV  EL  K E ++ C LS  Q   YQ +K    L    D  +G   +
Sbjct: 1088 VLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGML--FVDGEKG---K 1142

Query: 717  KKILNLMNIVIQLRKVCNHPELFE 740
              I  L N V+QL+K+CNHP +FE
Sbjct: 1143 TGIKGLQNTVMQLKKICNHPFIFE 1166



 Score =  164 bits (415), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 78/170 (45%), Positives = 116/170 (68%), Gaps = 6/170 (3%)

Query: 1044 QSFDPAKLLTD-----SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYR 1098
            ++ DP+    D     +GK + LD +L +L    H+ L+F QMT+++ I+EDY+  + ++
Sbjct: 1170 RAIDPSGTNVDLLWRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWK 1229

Query: 1099 YLRLDGSSTIMDRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTL 1157
            YLRLDGS+   DR  ++  F   +SD+++F+LSTRAGGLG+NL  ADTVI +++DWNP  
Sbjct: 1230 YLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 1289

Query: 1158 DLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGG 1207
            DLQA DRAHR+GQTK+V + RLI ++++EE IL RA  K  +   V+  G
Sbjct: 1290 DLQAQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAG 1339


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.133    0.383 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,040,229
Number of Sequences: 539616
Number of extensions: 21682497
Number of successful extensions: 79973
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 605
Number of HSP's that attempted gapping in prelim test: 75443
Number of HSP's gapped (non-prelim): 3461
length of query: 1377
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1247
effective length of database: 121,419,379
effective search space: 151409965613
effective search space used: 151409965613
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)