Query 000645
Match_columns 1377
No_of_seqs 431 out of 2244
Neff 5.6
Searched_HMMs 29240
Date Tue Mar 26 17:07:41 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000645.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_417-421//hhsearch_pdb/000645hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxu_X Tripeptidyl-peptidase 2 1.0 1 1 2551.7 86.8 1223 87-1377 6-1354(1354)
2 1xf1_A C5A peptidase, SCP; hyd 1.0 1 1 454.9 28.5 367 348-736 84-607 (926)
3 3vta_A Cucumisin; subtilisin-l 1.0 1 1 418.0 35.4 364 345-733 87-618 (621)
4 3i6s_A Subtilisin-like proteas 1.0 1 1 417.0 35.3 361 346-734 97-644 (649)
5 3afg_A Subtilisin-like serine 1.0 1 1 401.2 37.0 273 281-602 131-419 (539)
6 4h6x_A Thiazoline oxidase/subt 1.0 1 1 387.7 18.3 236 347-607 104-344 (357)
7 1r6v_A Subtilisin-like serine 1.0 1 1 381.8 27.5 262 285-601 154-439 (671)
8 3t41_A Epidermin leader peptid 1.0 1 1 380.3 20.4 274 285-604 146-468 (471)
9 3zxy_A Subtilisin-like protein 1.0 1 1 379.1 20.9 271 285-605 8-279 (282)
10 1y9z_A Alkaline serine proteas 1.0 1 1 378.1 27.1 269 281-609 16-435 (441)
No 1
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=2551.65 Aligned_cols=1223 Identities=31% Similarity=0.536 Sum_probs=1132.1
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCCCCEEEE
Q ss_conf 564110135898111038799885999877532999985355999999732689980-2999983779875457525540
Q 000645 87 LNESTFLASLMPKKEIGADRFVEANPQFDGRGVVIAIFDSGVDPAAAGLQVTSDGKP-KILDVIDCTGSGDIDTSTVIKA 165 (1377)
Q Consensus 87 ~~~~~~~~~l~Pk~etga~~f~~~~p~~dGrgv~IaIlDTGVDp~~pgLq~t~dG~~-KIid~~D~Tg~Gdvdt~~vv~~ 165 (1377)
..++||+++||||+||||.+|+++||+||||||+||||||||||+|||||+|+||+| ||||++||||+|||||++||++
T Consensus 6 ~~~~fp~~~llpK~et~~~~fl~~~P~ydGrgv~iai~DtGVDP~a~glq~t~dG~~~Kiid~~D~tG~GDVdts~v~~~ 85 (1354)
T 3lxu_X 6 IVESFPTGALVPKAETGVLNFLQKYPEYDGRDVTIAIFDSGVDPRATGLETLCDGKTVKVIERYDCSGCGDVDMKKKVTP 85 (1354)
T ss_dssp ------------CCTTTTCSSGGGSTTCSSTTCEEEEEESCCCTTSTTSSCCTTSSSCSCCEEEETTSTTEEETTEECCC
T ss_pred CCCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCEEEEC
T ss_conf 56788500007776761999998687878996489998178898988666468998642699885788876436137861
Q ss_pred CCCCCEEECCCCEEEECCCC----CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89981760014548747865----59983049956664013527799988875422-23256699999999989986310
Q 000645 166 DSDGCIRGASGATLVVNSSW----KNPSGEWHVGYKLVYELFTESLTSRLKSERKK-KWEEKNQEAIAKAVKHLDEFNQK 240 (1377)
Q Consensus 166 ~~dg~i~~~sGr~l~i~~~w----~~psg~~~vG~k~~~~lfp~~l~~rl~kerk~-~w~~~~~~a~aea~~~l~~f~~~ 240 (1377)
+.||+|+|++||+|+||.+| +||+|+||||+|..|+|||+.|++|+++|||+ .|++.|+.+++++++++.+|+.+
T Consensus 86 ~~~g~i~glsgr~l~~~~~w~~~~~~p~g~~~vG~k~~~~l~p~~l~~Rl~~erk~~~Wd~~~~~~~a~a~~~~~~~~~~ 165 (1354)
T 3lxu_X 86 DENGNIKGLSGNSLKLSPELMALNTDPEKAVRVGLKSFSDLLPSKVRNNIVAQAKLKHWDKPHKTATANASRKIVEFESQ 165 (1354)
T ss_dssp TTCC-----------------------CCSCCCCCSCCSSCTTSCCEEEEEECSSSSCTTCGGGCCCSSSTTTTCCCCCC
T ss_pred CCCCCEECCCCCEEECCHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 78983741658758669788511559888679987633334868789998876554313177799999999987776412
Q ss_pred CCCCC---CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 47654---301222135554547874201432489884011287438980999983999999999898578887778633
Q 000645 241 HKKVE---DGKLKRVREDLQNRVDILRKQAESYDDKGPVVDAVVWHDGEVWRVALDTQSLEDEPDHGKLADFAPLTNYKT 317 (1377)
Q Consensus 241 ~~~p~---~~~~k~~~e~l~~r~~~l~~~~~~y~d~gp~id~~vw~~GgV~VAVIDTGI~~id~~~~dL~~~~~l~~y~~ 317 (1377)
++.+. ..+.++.+|+++.+++.|+.+++.|.+.+|.+||++|++|+||||||||| .++|+.+..++.+|+.
T Consensus 166 ~p~~~~~~~~~~k~~keelq~~~e~L~~~~k~y~d~gpv~D~vVw~dG~V~VAVIDTG------~d~DL~d~~~l~~Y~~ 239 (1354)
T 3lxu_X 166 NPGEASKLPWDKKILKENLDFELEMLNSYEKVYGDIKTSYDCILFPTADGWLTIVDTT------EQGDLDQALRIGEYSR 239 (1354)
T ss_dssp CCSCSSSCCTTTHHHHHHHHHHHHHHHHHHTTGGGCCCEEEEEEECCSSSCEEEECSS------SSCCSSCSEEEECTTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECC------CCCCCCCCCCCCCCCC
T ss_conf 8974334545679988777778999899987466878642068977899899999597------9888655644556544
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHH
Q ss_conf 34666433576644223213688742237899990989999986469999986542389739999971499997667225
Q 000645 318 ERKHGVFSKLDACTFVANVYDEGNVLSIVTDSSPHGTHVAGIATAFNPEEPLLNGIAPGAQLISCKIGDTRLGSMETGTG 397 (1377)
Q Consensus 318 ~~~~g~f~~~d~~~~~~n~~d~g~~~~~~~D~~gHGThVAGIIAg~~~n~~g~~GVAP~AkIi~vKV~d~~~g~~et~s~ 397 (1377)
..+|+.| .+..++..+++++++...+..|++||||||||||||.. |+.++.||||+|+|+++|+++.+.+.++++.+
T Consensus 240 ~~dyg~F--~D~v~~~~n~~Ddgd~~~~v~D~~GHGThVAGIIAa~~-N~~g~~GVAP~AkI~~vKVld~~~g~~~t~s~ 316 (1354)
T 3lxu_X 240 THETRNV--DDFLSISVNVHDEGNVLEVVGMSSPHGTHVSSIASGNH-SSRDVDGVAPNAKIVSMTIGDGRLGSMETGTA 316 (1354)
T ss_dssp TCCCCEE--SSSCEEEEEEEGGGTEEEEEECCCHHHHHHHHHHCCCC-SSSSSCCSCTTCEEEEEECBCTTTSSCBCHHH
T ss_pred CCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC-CCCCCEEECCCCEEEEEEECCCCCCCCCCHHH
T ss_conf 2335543--34457877557998742458899996799999996677-87872556579879999942677776567179
Q ss_pred HHHHHHHHHH-----CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC-CCCCEEEE
Q ss_conf 9999999995-----99929996868999999837999999999964994999914899999998789999-99973999
Q 000645 398 LTRAFIAAVE-----HKCDLINMSYGEPTLLPDYGRFIDLVNEAVNKHRLVFVSSAGNSGPALNTVGAPGG-TSSSIIAV 471 (1377)
Q Consensus 398 ii~Ai~~Ai~-----~gadVINmS~G~~~~~~~~~~~~~~a~e~a~~~GVivVaAAGN~G~~~~tvg~Pa~-~s~~VIsV 471 (1377)
++.+|.++++ ++++|||||||....+.....+.+.+.+.+.++|++||+||||+|++.+++++|+. +++++|+|
T Consensus 317 l~~AI~~Aid~a~~~~gadVINmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItV 396 (1354)
T 3lxu_X 317 LVRAMTKVMELCRDGRRIDVINMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGV 396 (1354)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 99999999987763379659984876688887647999999999983795899808887788886578410258853899
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 53327211247520015899998310158998999997438995398311114668761002489840368999999999
Q 000645 472 GAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVCISAPGGAVAPVSTWTLQRRMLMNGTSMASPSACGGIALL 551 (1377)
Q Consensus 472 GA~~s~~~~~~~~~v~~~~~~g~~s~fSSrGPt~DG~ikpDI~APG~~I~s~~~~~~~~y~~~sGTSmAAP~VAG~aALL 551 (1377)
||++...+....|+.... ..+.+++|||+||+.+++.||||+|||++|.+.+.+..++|..++|||||||+|||++|||
T Consensus 397 GAtd~~~~~~a~ys~~~~-~~g~~asFSS~GPt~dg~~KpDIaAPG~~I~St~~~~~~~y~~~SGTSmAAP~VAGvAALL 475 (1354)
T 3lxu_X 397 GAYVSPQMMEAEYAMREK-LPGNVYTWTSRDPCIDGGQGVTVCAPGGAIASVPQFTMSKSQLMNGTSMAAPHVAGAVALL 475 (1354)
T ss_dssp EEECCTTCCCC-----------CCCCCCCCSCCSSSSCCEEEEEEC---------------CCCCGGGCHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHH
T ss_conf 766178874322234567-7774012258898756787615993573278730589996524787778899999999999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC--EEEEEEECCCCCCCCCEEE
Q ss_conf 89875189999999999999813945898888988533450499899999995299982--4589997158998873002
Q 000645 552 ISAMKANAIPVSPYTVRKAVENTSVPIGALAEDKLSTGHGLLQVDKAYEYVQQYGNVPC--VSYQIKINQSGKLTPTYRG 629 (1377)
Q Consensus 552 lsa~k~~~p~lTp~~Ik~aL~~TA~~~~~~~~~~~~~G~GlIdv~kAv~~l~~~~~~p~--~~~~vsv~~~~~~~~~~rG 629 (1377)
++++++.+|.+++.+|+++|++||++++.. +++.+|||+||+.+|++.+..+...|. +.|.+++.. ...+|
T Consensus 476 LSalkq~~P~LTp~qVk~lL~~TA~~~~~~--~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~-----~~~rg 548 (1354)
T 3lxu_X 476 ISGLKQQNIEYSPYSIKRAISVTATKLGYV--DPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGN-----NADKG 548 (1354)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHTTSBCCTTS--CTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETT-----TTBSS
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHCCCCCCC--CCCCCCCCEECHHHHHHHHHHCCCCCCCCEEEEEEECC-----CCCCC
T ss_conf 976686489989999999999748568899--94454687857999999998658897663489998557-----78873
Q ss_pred EEEECCCCCCCEEEEEEEEEEEC--CCCCCCCCCCCCCEEEEEEEECCCCEEECCCCEEECCCCEEEEEEECCCCCCCCE
Q ss_conf 99803888886079999963210--4787875554471179998427974597275033048845999999089999970
Q 000645 630 IYLRDAGASQQSTEWTVQVEPKF--HEDASNLEELVPFEECIELHSTDKAVLRAPEYLLLTHNGRSFNVVVDPTNLEDGL 707 (1377)
Q Consensus 630 IylR~~~~~~~~~~~tV~v~p~f--~~~~~~~~~~~~~~~~v~l~~~~~~wV~vP~~l~l~~~~~~~~V~VDp~~L~~G~ 707 (1377)
||+|+... ..+.+|+++|+|.| ++.+++ ..++.|+.++.|.++.+ ||+||.++.+++++|+|+|+|||++|++|+
T Consensus 549 IylR~~~~-~~~~~~tv~V~p~f~~~~~~~~-~~~i~f~~~l~L~~t~~-wv~~p~~l~l~~~~r~~~v~vDp~~L~~G~ 625 (1354)
T 3lxu_X 549 IHLRQGVQ-RNSIDYNVYIEPIFYNDKEADP-KDKFNFNVRLNLIASQP-WVQCGAFLDLSYGTRSIAVRVDPTGLQPGV 625 (1354)
T ss_dssp EEECSSCC-CSCEEEEEEEEEEESSCSCSSS-TTCSCCCCEEEEEESST-TEEECSCEECTTSCEEEEEEECGGGCCSEE
T ss_pred EEEECCCC-CCCEEEEEEEEEEECCCCCCCH-HHCCCEEEEEEEECCCC-CEECCCCEEECCCCCEEEEEECCCCCCCCC
T ss_conf 48713234-7861799999664157665772-12256579999863798-140656235427982589998788899863
Q ss_pred EEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCC--------EEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECC
Q ss_conf 6999999965899999738997999902434689992--------45542111797068999625999718999996158
Q 000645 708 HYYEIYGIDCKAPGRGPLFRIPVTIIKPTAVVKRPPL--------VSFSRMSFLPGQIERRFIEVPLGATWVEATMRTSG 779 (1377)
Q Consensus 708 h~~~i~~~D~~~~~~g~~~~IPvTvv~P~~~~~~~~~--------~~~~~~~~~~G~i~R~Fv~VP~Gat~~~v~l~~~~ 779 (1377)
||++|++||+.+++.||+|||||||++|+.+...... ++++.+.|+||+|+|+||.||+||||++++|++++
T Consensus 626 h~~~v~~~D~~~~~~gp~f~ipvTv~~P~~~~~~~~~~~~~~~~~~~~~~~~~~pg~i~R~Fi~vP~gatwa~~~~~~~~ 705 (1354)
T 3lxu_X 626 HSAVIRAYDTDCVQKGSLFEIPVTVVQPHVLESDQNTPVFEPASSKGDNSVEFQPNTIQRDFILVPERATWAELRMRITD 705 (1354)
T ss_dssp EEEEEEEEESSCTTSCCSEEEEEEEEECBCCCCSSSSCEECCCCSSSCCCEEECSSCCEEEEEECCTTCCEEEEEEEECS
T ss_pred EEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCEEEEEEEECC
T ss_conf 16899999747866686388557998546606776755345433212330320689636898828899866999998358
Q ss_pred CCCC---CEEEEEEECCCCCC--CCCEEEEEEEECCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 9875---41999941136578--864044567406997302879742792799973302048989998438974542239
Q 000645 780 FDTT---RRFFVDTVQVCPLQ--RPLKWENVVTFSSPVSKNFAFPVVGGQTMELAIAQFWSSGMGSHETTIVDFEVAKLI 854 (1377)
Q Consensus 780 ~~~~---~~f~~h~~ql~p~~--r~~e~~~~~~~~~~~~~~~~f~v~~g~tlE~~ia~~Ws~~~~~~~~~~~~~~~~~~i 854 (1377)
++++ +|||||++||+|++ |.+|++||++|+++++++++|+|+||+||||||||||| |+|++.|||+ |
T Consensus 706 ~~~~~~~~~f~~h~~ql~p~~~~~~~e~~k~~~~~~~~~~~~~~~v~~g~tlElcia~~Ws----s~~~~~~~~~----i 777 (1354)
T 3lxu_X 706 PNRGEDIGKFFVHTNQLLPKQSCRKLETMKIVSVGSENESIMAFKVKSGRILELCIAKYWS----NYGQSHLKYS----L 777 (1354)
T ss_dssp SCCTTCEEEEEEEEEECCTTCCGGGSEEEEEEEEESSSCEEEEEECCTTSEEEEEEEECCC----SSSCEEEEEE----E
T ss_pred CCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEHHHHHC----CCCCEEEEEE----E
T ss_conf 8887633159999660357645553111467622789833688996399679998665536----6787468999----9
Q ss_pred EEEEEEECCC-EEEECCCCCCEEEEEECCCCCCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCCCCCCEEEEEEEEEE
Q ss_conf 9984320787-046507998439998525753222222352322444147872121079998877899505899988975
Q 000645 855 EFHGIAVNKD-EVLLDGSEAPVRIDAEALLTSERLAPAAVLNKIRVPCRPIETKLTVLPTNRDKLPSGKQILALTLTYKF 933 (1377)
Q Consensus 855 ~Fhg~~~~~~-~~~~~~~~~~~r~~~~s~l~~e~~~P~~~l~~~~~~~rP~~~~i~pl~~~rd~l~~~~q~~~l~ltY~f 933 (1377)
+||||.++++ .++||+++|++||+|+| |++|+|+|+|+|++|+++|||+|+||+||+++||+||+|||+|||+|||+|
T Consensus 778 ~F~g~~~~~~~~~~~~~~~~~~~~~~~s-l~~e~~~P~~~l~~~~~~lrP~~~~i~pl~~~rd~l~~~~q~~~l~ltY~~ 856 (1354)
T 3lxu_X 778 RFRGVEAHNPNAYVMHAGRGIHKLEIEA-LVAEDVQPQLQLKNAEVVLKPTEAKISPLSATRDVIPDGRQVYQNLLAFNL 856 (1354)
T ss_dssp EEECEEECSTTTTEEETTSCCEEEEEEE-SSCEEEEEEEEEEEEEEEECCSCEEEEECCSSSSEETTTEECEEEEEEEEE
T ss_pred EEEEECCCCCCCEEEECCCCCEEEEEEE-CCCCCCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEE
T ss_conf 9962126898615761367614899840-345222550675032787057753434678621247897412457888987
Q ss_pred EECCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCC--CCCCCCCCEEEEEEEECCCHHHHHHCCCCCE
Q ss_conf 41466056311433213235655651479998178754652467899--9777896679999984089678985138708
Q 000645 934 KLEDGAEVKPQIPLLNNRIYDTKFESQFYMISDTNKRVYAQGDVYPD--YSKLPKGDYNLQLYLRHDNVQYLEKMKQLVL 1011 (1377)
Q Consensus 934 ~~~~~~~v~p~~p~l~~~lYes~~~sq~~~i~d~nk~~~~~gd~yp~--~~kL~KG~Y~~~~qirh~~~~~Le~lk~~~l 1011 (1377)
+++|++||+|+||+||++||||+||||||||||+|||+|++||+||+ ++||+|||||||||||||++++|||||++||
T Consensus 857 ~~~~~~ev~~~~p~l~~~lYes~~esq~~~ifd~nk~~~~~gd~yp~~~~~kl~KG~Y~~r~qirh~~~~~Le~lk~~~l 936 (1354)
T 3lxu_X 857 NVAKAADVSIYAPIFNDLLYEAEFESQMWMLFDANKALVATGDAHSHTSFTKLDKGEYTIRLQVRHEKRDLLEKISEANL 936 (1354)
T ss_dssp EESSCEEEEEECTTTTTCSSSCSSSCCCEEEECTTSCEEEEECSSCTTCCEEECSEEEEEEEEEEESCHHHHGGGTTCCE
T ss_pred ECCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCE
T ss_conf 31677247663543342111561341369998488747860576765344314675579999995399899988646828
Q ss_pred EEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC--CEEEEEEEECCCCCCCCC
Q ss_conf 899852888727886024999864479865431136997224995699999999999999--648999991112456777
Q 000645 1012 FIERKLEEKDVIRLSFFSQPDGPIMGNGTYKSSILVPGKKEAFYLSPPGKDKLPKNSPQG--SILLGAISYGKLSFQGQE 1089 (1377)
Q Consensus 1012 ~~~~kL~~~~~i~l~~~~~~~~a~~g~~~~~~~~l~~g~~~~~y~~~~~~~k~pk~~~~g--~~l~G~~~~~k~~~~~~~ 1089 (1377)
+|+|||+++ |+||||++|++|++|++|+++.+| ||+++||||+|+++||+||++.|| ++|+|+|+|+|++.+
T Consensus 937 ~~~~kL~~~--i~l~~~~~~~~a~~~~~~~~~~~l-~g~~~~~~~~~~~~~k~pk~~~~g~~~~l~G~~~~~k~~~~--- 1010 (1354)
T 3lxu_X 937 VASFKLTSP--LTLDFYENYNQCIVGGRKYVSSPL-RLSTRVLYIAPITQERLTKANLPAQCAWLSGNLVFPQDEVG--- 1010 (1354)
T ss_dssp EEEEEEEEE--EEECCBSSHHHHHTTCSCCCCEEE-CSSEEEEEECCCCHHHHHTTTCCTTEEEEEEEEEEESCHHH---
T ss_pred EEEEECCCC--EEEEEECCCHHHHHCCCCCCCCCC-CCCEEEEEEECCCHHHCCCCCCCCCCEEEEEEEEEECCCCC---
T ss_conf 999724886--366543373455316765555315-89725799606861216667899985189988897124468---
Q ss_pred CCCCCCCCCEEEEEEEECCCC-CCCCCC-------------------------C--------------------------
Q ss_conf 999999998169999991899-888888-------------------------9--------------------------
Q 000645 1090 GGKNPQKNPVSYEIAYIVPPN-KLDEDK-------------------------G-------------------------- 1117 (1377)
Q Consensus 1090 ~~~~~~~~~~~~~~~y~~~p~-~~~~~~-------------------------~-------------------------- 1117 (1377)
|+++.|||+|+++|+ +|..++ .
T Consensus 1011 ------~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1084 (1354)
T 3lxu_X 1011 ------RRVAQHPFTYILNPAEKKSHTNGSSNGSSAAGSTATAAAVTTANGAKPKAPATPQAATSVTNPAAGDGISVQND 1084 (1354)
T ss_dssp ------HHHCCEEEEEECCCCC----------------------------------------------------------
T ss_pred ------CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf ------86550557999668777655554544432223343322221223344444433222233333334555443345
Q ss_pred -------CCCCC-CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf -------99999-9999679999999999998760367678132346999999999829999689999998551468878
Q 000645 1118 -------KGSPT-GTKTVSERLEEEVRDAKMKVLGSLKQETDEECSDWKKLAASLKSEYPKYTPLLAKILEGLLSRSNVG 1189 (1377)
Q Consensus 1118 -------~~~~~-~~k~~~~~~~e~~rd~~i~~l~kl~~~~~~~~~~~~~~~~~l~~~~p~~lpl~~~~l~~l~~~~~~~ 1189 (1377)
+.+++ ++|+.+|+|.|++||+||+||+||+.| +++++|++|+++||+|||||+++||+||+.+...
T Consensus 1085 ~~~~~~~~~~~~~~~~~~~~~~~e~~rd~~~~~~~k~~~~------~~~~~~~~l~~~~P~~l~~~~~~l~~l~~~~~~~ 1158 (1354)
T 3lxu_X 1085 PPVDSSGSPASPKKGKANADDYAESFRDFQCSQIVKCELE------MAEKIYNDVVAAHPKHLQANLLLIQNIESNQLKS 1158 (1354)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHHHTTSCHH------HHHHHHHHHHHHCTTCTHHHHHHHHHHHHHSSCC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 5444566767765567768999999988888888623867------8999999999878764799999998664122201
Q ss_pred -----------------------CC------CCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf -----------------------75------4008899999999998079779996822568999478999976389969
Q 000645 1190 -----------------------DK------IHHYEEVIDAANEVVDSIDQDELAKFFSQKSDPEDEETEKIKKKMETTR 1240 (1377)
Q Consensus 1190 -----------------------~~------~~~~~~ii~~ad~vi~~id~~~l~~~~g~k~d~~~~~a~~~k~~me~~k 1240 (1377)
|+ ++++++||++||+||++|||+|||+|||+|+|+| +||+|+|++|||||
T Consensus 1159 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~ad~vi~~id~~~l~~~~g~k~d~~-~~a~k~k~~m~~~k 1237 (1354)
T 3lxu_X 1159 QLPLTFVNAQKTSPPEAGESADKQKEDQKKVRSALERIVKLADKVIQETDSEALLSYYGLKNDTR-ADAAKIKTNMDKQK 1237 (1354)
T ss_dssp CCHHHHHHTTSCCCSSCTTHHHHTTHHHHHHHHHHHHHHHHHHHTTCHHHHTTTSTTCCSTHHHH-CSSSCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC-HHHHHHHHHHHHHH
T ss_conf 46521112333444332222233202345678889999999999998459989999856778996-27899998899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCH
Q ss_conf 99999999999985213331045676322347876688889990249999999985101479984263056699991768
Q 000645 1241 DQLAEALYQKALAMLEIESLKGEKSGAEAATEGTTDVDKTSDSQPDLFEENFKELKKWADVKSPKYGSLLVLREKRCGRL 1320 (1377)
Q Consensus 1241 ~~li~AL~~k~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~kw~d~~d~k~~~~~~~~~~~~~~~ 1320 (1377)
++|||||||||+|||+++.+... ...++++|+++|+||+||+|++|+||++|++||+++++||
T Consensus 1238 ~~l~~al~~k~~ala~~~~~~~~-----------------~~~~~~~~~~~~~el~k~~d~~d~k~~~~~~~~~~~~~~~ 1300 (1354)
T 3lxu_X 1238 NTLIEALSKKGIAVAKLAVLDDC-----------------IKDSLAEINELYTEIIKFVDANDSKAIQFALWHAYAHGHY 1300 (1354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-----------------SGGGHHHHHHHHHHHTTSSCTTSTTTHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH
T ss_conf 99999999999999998864300-----------------3568999999999987610467862314489999998889
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 689999996520389994788999999999991991589999862000379999999
Q 000645 1321 GTALKVLGDIIQDDSEPPKKKLYELKISLLEELGWSHLTTYEKLWMHVRFPPSLPLF 1377 (1377)
Q Consensus 1321 g~alk~l~k~~~~~~~~~~k~~~~~~~~l~~~lgw~h~~~~~~~~~~~~~p~~~~~F 1377 (1377)
|||||+|+|++||+ ++|++++++++|+++|||+||++|+++|+++|||++||||
T Consensus 1301 g~~~k~l~k~~~~k---~~~~~~~~~~~~~~~l~w~h~~~~~~~~~~~~~p~~~~~f 1354 (1354)
T 3lxu_X 1301 GRMYKYVVKLIEEK---RTRDHFVELAAINGALGHEHIRTVINRMMITAFPSSFRLF 1354 (1354)
T ss_dssp HHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCC
T ss_pred HHHHHHHHHHHHCC---CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999987413---3178999999999975988999999865656475658999
No 2
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=1.00 E-value=1 Score=454.88 Aligned_cols=367 Identities=20% Similarity=0.264 Sum_probs=251.7
Q ss_pred CCCCCHHHHHHHHHCCCC----CCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 999909899999864699----9998654238973999997149999766722599999999959992999686899999
Q 000645 348 DSSPHGTHVAGIATAFNP----EEPLLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEHKCDLINMSYGEPTLL 423 (1377)
Q Consensus 348 D~~gHGThVAGIIAg~~~----n~~g~~GVAP~AkIi~vKV~d~~~g~~et~s~ii~Ai~~Ai~~gadVINmS~G~~~~~ 423 (1377)
|..||||||||||||+.. ++.++.||||+|+|+++|+++..+.+ ....++++||+||+++|+||||||||....+
T Consensus 84 D~~gHGThVAgiiAg~~~~~~~~~~~~~GvAP~A~l~~~kv~~~~g~~-~~~~~i~~Ai~~Ai~~gvdVIn~SlG~~~~~ 162 (926)
T 1xf1_A 84 VDQEHGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLA-DYARNYAQAIRDAINLGAKVINMSFGNAALA 162 (926)
T ss_dssp CSSTTTTHHHHSSCCCCCCCCSCSCCTTTTCTTSEEEEEECCCCSCHH-HHHHHHHHHHHHHHHTTCEEEEECCSSCCCT
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCC-CCHHHHHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 989857899899867886676667746897888889999921389988-7289999999999981991999798789887
Q ss_pred -CCHHHHHHHHHHHHHCCCCEEEEECCCCCC-------------CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC----
Q ss_conf -983799999999996499499991489999-------------99987899999997399953327211247520----
Q 000645 424 -PDYGRFIDLVNEAVNKHRLVFVSSAGNSGP-------------ALNTVGAPGGTSSSIIAVGAYVSPAMAAGAHC---- 485 (1377)
Q Consensus 424 -~~~~~~~~~a~e~a~~~GVivVaAAGN~G~-------------~~~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~---- 485 (1377)
..+...+..+.+.+.++|+++|+||||+|+ ...++++|+ .++++|+|||++....+.....
T Consensus 163 ~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA-~~~~vitVgA~~~~~~~~~~~~~~~~ 241 (926)
T 1xf1_A 163 YANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPA-AADSTLTVASYSPDKQLTETVRVKTA 241 (926)
T ss_dssp TCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCT-TTCCSEEEEEEBCSEEEEEEEEEECT
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCC-CCCCEEEEECCCCCCCCCCCEEEECC
T ss_conf 65556089999999974896899928988876775555434578742323766-68865999056566544211699837
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 000645 486 -------------------------------------------------------------------------------- 485 (1377)
Q Consensus 486 -------------------------------------------------------------------------------- 485 (1377)
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~lv~~~~g~~~~~~~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~ 321 (926)
T 1xf1_A 242 DQQDKEMPVLSTNRFEPNKAYDYAYANRGTKEDDFKDVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIE 321 (926)
T ss_dssp TSCEEEEEEEEESCCCTTCCEEEEECTTSCSTTTTTTCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEE
T ss_pred CCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC
T ss_conf 87640368772377788865788988888783306543880999989988899999999967971999983677773001
Q ss_pred -----------------------------------CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCC
Q ss_conf -----------------------------------015899998310158998999997438995398311114668761
Q 000645 486 -----------------------------------VVEPPSEGLEYTWSSRGPTADGDLGVCISAPGGAVAPVSTWTLQR 530 (1377)
Q Consensus 486 -----------------------------------v~~~~~~g~~s~fSSrGPt~DG~ikpDI~APG~~I~s~~~~~~~~ 530 (1377)
.......+.++.||||||+.++++||||+|||++| ++.|..+.
T Consensus 322 ~~~~~~iP~~~i~~~~g~~l~~~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~~~~lKPDI~APG~~I--~sa~~~~~ 399 (926)
T 1xf1_A 322 LPNVDQMPAAFISRKDGLLLKDNPQKTITFNATPKVLPTASGTKLSRFSSWGLTADGNIKPDIAAPGQDI--LSSVANNK 399 (926)
T ss_dssp CCCSTTCCEEEECHHHHHHHHHCSSCEEEECSSCEEEECSSCSBCCTTSCCCBCTTSCBSCCEEEECCCE--EESSSCSS
T ss_pred CCCCCCCCEEEEEHHHHHHHHHCCCEEEEECCCCEECCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCE--EEECCCCC
T ss_conf 5766423179985899999972894599855651121467766550236789898886073398899887--80116996
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH----HHHHHHHCCCCCCCC----CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 002489840368999999999898751899999999----999998139458988----889885334504998999999
Q 000645 531 RMLMNGTSMASPSACGGIALLISAMKANAIPVSPYT----VRKAVENTSVPIGAL----AEDKLSTGHGLLQVDKAYEYV 602 (1377)
Q Consensus 531 y~~~sGTSmAAP~VAG~aALLlsa~k~~~p~lTp~~----Ik~aL~~TA~~~~~~----~~~~~~~G~GlIdv~kAv~~l 602 (1377)
|..++|||||||||||++|||+|++++.+|.|+|.+ ||++|++||.++... .++++.||+|+||+.+|++.-
T Consensus 400 y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~ 479 (926)
T 1xf1_A 400 YAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDEDEKAYFSPRQQGAGAVDAKKASAAT 479 (926)
T ss_dssp SCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGGGTEECCHHHHTTCBCCHHHHHHCS
T ss_pred CEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCC
T ss_conf 05637640567899999999999876118887877889999999985387765688873177103277702998965887
Q ss_pred H---HCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEE
Q ss_conf 9---5299982458999715899887300299803888886079999963210478787555447117999842797459
Q 000645 603 Q---QYGNVPCVSYQIKINQSGKLTPTYRGIYLRDAGASQQSTEWTVQVEPKFHEDASNLEELVPFEECIELHSTDKAVL 679 (1377)
Q Consensus 603 ~---~~~~~p~~~~~vsv~~~~~~~~~~rGIylR~~~~~~~~~~~tV~v~p~f~~~~~~~~~~~~~~~~v~l~~~~~~wV 679 (1377)
. .....+ ..+.+... .......+.++|........+|.+++...-..+ ..+... --.|....+..|
T Consensus 480 ~~l~~~~~~~---~~i~l~~~--~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~-----~~~~v~-p~~l~~~~~~~v 548 (926)
T 1xf1_A 480 MYVTDKDNTS---SKVHLNNV--SDKFEVTVNVHNKSDKPQELYYQATVQTDKVDG-----KHFALA-PKVLYETSWQKI 548 (926)
T ss_dssp EEEEESSSSC---SCEEEEEE--CSEEEEEEEEEECSSSCEEEEEEEEEEEEEEET-----TEEEEE-EEEEEECCCEEE
T ss_pred EEEECCCCCC---CEEECCCC--CCCEEEEEEEEEECCCCEEEEEEEEEEECCCCC-----CEEEEC-CCEEEECCCCEE
T ss_conf 6997689875---41452656--760899999998279962699999998436788-----348853-553575268759
Q ss_pred ECCCCEEECCCCEEEEEEECCCC--------CCCC-EEEEEEEEEECCCCCCCCEEEEEEEEEECC
Q ss_conf 72750330488459999990899--------9997-069999999658999997389979999024
Q 000645 680 RAPEYLLLTHNGRSFNVVVDPTN--------LEDG-LHYYEIYGIDCKAPGRGPLFRIPVTIIKPT 736 (1377)
Q Consensus 680 ~vP~~l~l~~~~~~~~V~VDp~~--------L~~G-~h~~~i~~~D~~~~~~g~~~~IPvTvv~P~ 736 (1377)
++|+ ++..+|+|+++++. ++.| .+++.|.+.+.. ..++.++||+.+....
T Consensus 549 tv~a-----g~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~--~~~~~v~~P~~~~~g~ 607 (926)
T 1xf1_A 549 TIPA-----NSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDP--TKEELMSIPYIGFRGD 607 (926)
T ss_dssp EECT-----TEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESST--TSCCCEEEEEEEEESC
T ss_pred EECC-----CCEEEEEEEEECCCCCHHHCCCCCCCCEEEEEEEEEECC--CCCCEEEEEEEEEECC
T ss_conf 9899-----998999999974765501013466871799999999589--9877899666999637
No 3
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=1.00 E-value=1 Score=418.00 Aligned_cols=364 Identities=20% Similarity=0.209 Sum_probs=238.5
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCC--------CCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 37899990989999986469999--------9865423897399999714999976672259999999995999299968
Q 000645 345 IVTDSSPHGTHVAGIATAFNPEE--------PLLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEHKCDLINMS 416 (1377)
Q Consensus 345 ~~~D~~gHGThVAGIIAg~~~n~--------~g~~GVAP~AkIi~vKV~d~~~g~~et~s~ii~Ai~~Ai~~gadVINmS 416 (1377)
.+.|++||||||||||||+..++ ..+.||||+|+|+++|+++..+ + ..+++++||+||+++|+||||||
T Consensus 87 ~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~--~~~di~~a~~~a~~~g~dVin~S 163 (621)
T 3vta_A 87 GPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDG-C--SDTDILAAYDDAIADGVDIISLS 163 (621)
T ss_dssp SSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTE-E--CHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCC-C--CHHHHHHHHHHHHHHCCCEEEEC
T ss_conf 98878927789999985767777663454666678888999799999114899-9--77999999999997299899826
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC----------------
Q ss_conf 6899999983799999999996499499991489999999878999999973999533272112----------------
Q 000645 417 YGEPTLLPDYGRFIDLVNEAVNKHRLVFVSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMA---------------- 480 (1377)
Q Consensus 417 ~G~~~~~~~~~~~~~~a~e~a~~~GVivVaAAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~---------------- 480 (1377)
||+.............+...+.++|+++|+||||+|+...+++.++ +++++|++.......
T Consensus 164 lG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a---~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s 240 (621)
T 3vta_A 164 VGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLS---PWLLSVAASTMDRKFVTQVQIGNGQSFQGVS 240 (621)
T ss_dssp CCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCC---TTSEEEEEECCSEEEEEEEEETTSCEEEEBC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC---CCCEEEEEEECCCCCEEEEEECCCCEEEEEE
T ss_conf 7788777767759999999998789889994788888874047788---8741688760365402247732574054235
Q ss_pred ------------------------------------------------------------CCCCC---------------
Q ss_conf ------------------------------------------------------------47520---------------
Q 000645 481 ------------------------------------------------------------AGAHC--------------- 485 (1377)
Q Consensus 481 ------------------------------------------------------------~~~~~--------------- 485 (1377)
.+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~~~~~~~~~~~Ga~gvi~~~~~~~~~~~~~ 320 (621)
T 3vta_A 241 INTFDNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRDYADSYP 320 (621)
T ss_dssp CCCSCCEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCCCHHHHHHHHTTCSEEEEECSCCSSCCCCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCEEEEEEEECCCCCCCCCC
T ss_conf 03578864321025534545556543232466665531323309998147771677665156049999734777666645
Q ss_pred --------------------------------CCCCCCCCCCCCCCCCCCCC--CCCCCEEEEECCCCEEEC-CCC----
Q ss_conf --------------------------------01589999831015899899--999743899539831111-466----
Q 000645 486 --------------------------------VVEPPSEGLEYTWSSRGPTA--DGDLGVCISAPGGAVAPV-STW---- 526 (1377)
Q Consensus 486 --------------------------------v~~~~~~g~~s~fSSrGPt~--DG~ikpDI~APG~~I~s~-~~~---- 526 (1377)
.......+.++.||||||+. ++.+||||+|||++|.+. +..
T Consensus 321 lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~ 400 (621)
T 3vta_A 321 LPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVG 400 (621)
T ss_dssp SSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCSSSCBT
T ss_pred CCEEEECHHHHHHHHHHHHCCCCCCEEEECCEEECCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCC
T ss_conf 42599779999999999862677506872225750578872444057798887787206630368865675447665666
Q ss_pred ---CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCCHHHHHHH
Q ss_conf ---8761002489840368999999999898751899999999999998139458988--88988533450499899999
Q 000645 527 ---TLQRRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGAL--AEDKLSTGHGLLQVDKAYEY 601 (1377)
Q Consensus 527 ---~~~~y~~~sGTSmAAP~VAG~aALLlsa~k~~~p~lTp~~Ik~aL~~TA~~~~~~--~~~~~~~G~GlIdv~kAv~~ 601 (1377)
....|..++|||||||||||++|||+|+ +|+|+|++||.+|++||.++... +..++.+|+|+||+.+|++-
T Consensus 401 ~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~----~P~~spa~IksaLmtTA~~~~~~~~~~~~~~~GaG~v~~~~A~~p 476 (621)
T 3vta_A 401 GIRRNTLFNIISGTSMSCPHITGIATYVKTY----NPTWSPAAIKSALMTTASPMNARFNPQAEFAYGSGHVNPLKAVRP 476 (621)
T ss_dssp TBCCCCSEEEECSHHHHHHHHHHHHHHHHHH----CTTCCHHHHHHHHHHTCBCCCTTTCTTTHHHHTTCBCCHHHHSCC
T ss_pred CCCCCCCCEEECCCCCCCHHHHHHHHHHHHH----CCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCHHHHCCC
T ss_conf 7678875057437664215466689999977----899999999999985487666667878703127774387782489
Q ss_pred HHHCCCCC--CEEEEEEEC----------------CCCCCC----CCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf 99529998--245899971----------------589988----73002998038888860799999632104787875
Q 000645 602 VQQYGNVP--CVSYQIKIN----------------QSGKLT----PTYRGIYLRDAGASQQSTEWTVQVEPKFHEDASNL 659 (1377)
Q Consensus 602 l~~~~~~p--~~~~~vsv~----------------~~~~~~----~~~rGIylR~~~~~~~~~~~tV~v~p~f~~~~~~~ 659 (1377)
-.-+...+ .+.|.+... ...... -+.-.|.+........+.+++.+|+ +.+..
T Consensus 477 GLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvt----nvg~~- 551 (621)
T 3vta_A 477 GLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLT----SVAPQ- 551 (621)
T ss_dssp SEECCCCGGGCC-----------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEE----ECSSS-
T ss_pred CEEEECCCCHHHHHHCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEE----CCCCC-
T ss_conf 7684146310233102457870220344036432677785752104666179881699844799999998----14999-
Q ss_pred CCCCCCEEEEEEEECCCCEEEC-CCCEEECCC--CEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEE
Q ss_conf 5544711799984279745972-750330488--4599999908999997069999999658999997389979999
Q 000645 660 EELVPFEECIELHSTDKAVLRA-PEYLLLTHN--GRSFNVVVDPTNLEDGLHYYEIYGIDCKAPGRGPLFRIPVTII 733 (1377)
Q Consensus 660 ~~~~~~~~~v~l~~~~~~wV~v-P~~l~l~~~--~~~~~V~VDp~~L~~G~h~~~i~~~D~~~~~~g~~~~IPvTvv 733 (1377)
....++.+......-|+| |..+.+... ..+|+|++... ...+..++.|...| .....|+||.|.
T Consensus 552 ----~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~-~~~~~~~g~l~w~d-----~~h~Vr~Pi~v~ 618 (621)
T 3vta_A 552 ----ASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGS-IKGFVVSASLVWSD-----GVHYVRSPITIT 618 (621)
T ss_dssp ----CEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEEC-CCSSEEEEEEEEEC-----SSCCCEEEEEEE
T ss_pred ----CEEEEEEEECCCCCEEEEECCEEEECCCCCEEEEEEEEEEC-CCCCEEEEEEEEEC-----CCEEEEECEEEE
T ss_conf ----73899999889996799952989975799689999999945-77856899999985-----999999288998
No 4
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=1.00 E-value=1 Score=417.03 Aligned_cols=361 Identities=21% Similarity=0.266 Sum_probs=241.4
Q ss_pred CCCCCCCHHHHHHHHHCCCCCCC--------CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 78999909899999864699999--------8654238973999997149999766722599999999959992999686
Q 000645 346 VTDSSPHGTHVAGIATAFNPEEP--------LLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEHKCDLINMSY 417 (1377)
Q Consensus 346 ~~D~~gHGThVAGIIAg~~~n~~--------g~~GVAP~AkIi~vKV~d~~~g~~et~s~ii~Ai~~Ai~~gadVINmS~ 417 (1377)
+.|.+||||||||||||+..++. .+.||||+|+|+++|+++..+ + ...++++||+||+++++|||||||
T Consensus 97 ~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~--~~~~i~~Ai~~A~~~gvdVIn~Sl 173 (649)
T 3i6s_A 97 ARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG-T--FTSDLIAAMDQAVADGVDMISISY 173 (649)
T ss_dssp SBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE-E--CHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCC-C--CHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 8889985899999986877768663344667546787888899983347889-8--899999999999976997999587
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC-----------------
Q ss_conf 899999983799999999996499499991489999999878999999973999533272112-----------------
Q 000645 418 GEPTLLPDYGRFIDLVNEAVNKHRLVFVSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMA----------------- 480 (1377)
Q Consensus 418 G~~~~~~~~~~~~~~a~e~a~~~GVivVaAAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~----------------- 480 (1377)
|.... +.....+..+...+.++|+++|+||||+|+...++. . .++++|+|||.......
T Consensus 174 G~~~~-~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~--~-~ap~vitVgAst~dr~f~~~~~lgng~~~~g~sl 249 (649)
T 3i6s_A 174 GYRFI-PLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLN--N-GSPWILCVASGHTDRTFAGTLTLGNGLKIRGWSL 249 (649)
T ss_dssp CCCSC-CGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCS--C-CCTTSEEEEEEECSCEEEEEEEETTSCEEEEECC
T ss_pred CCCCC-CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC--C-CCCCEEEEEEEECCCCEEEEEEECCCCEEEEEEC
T ss_conf 66776-420269999999998499489995888899878557--8-8994689966511553036899279857865642
Q ss_pred ---------------------------------CCCC-------------------------------------------
Q ss_conf ---------------------------------4752-------------------------------------------
Q 000645 481 ---------------------------------AGAH------------------------------------------- 484 (1377)
Q Consensus 481 ---------------------------------~~~~------------------------------------------- 484 (1377)
.+..
T Consensus 250 ~~~~~~~~~~plv~~~~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~P~ 329 (649)
T 3i6s_A 250 FPARAFVRDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPGVFRSATFPNPG 329 (649)
T ss_dssp CSSCBCEEEEEEECCTTTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGGGGGCCCCCSCE
T ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCE
T ss_conf 56766676035686466443565545654213488489992798618888888975584378972475433565676877
Q ss_pred -----------------------------CCCCCCCCCCCCCCCCCCCCCC--CCCCEEEEECCCCEEECCCCCC-----
Q ss_conf -----------------------------0015899998310158998999--9974389953983111146687-----
Q 000645 485 -----------------------------CVVEPPSEGLEYTWSSRGPTAD--GDLGVCISAPGGAVAPVSTWTL----- 528 (1377)
Q Consensus 485 -----------------------------~v~~~~~~g~~s~fSSrGPt~D--G~ikpDI~APG~~I~s~~~~~~----- 528 (1377)
.+......+.++.||||||..+ +.+||||+|||++|.+ .|..
T Consensus 330 ~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ils--a~~~~~~~~ 407 (649)
T 3i6s_A 330 VVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILA--AYPPNVFAT 407 (649)
T ss_dssp EEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEE--ECCTTSCCE
T ss_pred EEECHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE--ECCCCCCCC
T ss_conf 997488979999998658984599962532504677885223689899877888658859958888685--357987766
Q ss_pred ---------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC-----------CCCCCCC
Q ss_conf ---------61002489840368999999999898751899999999999998139458988-----------8898853
Q 000645 529 ---------QRRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGAL-----------AEDKLST 588 (1377)
Q Consensus 529 ---------~~y~~~sGTSmAAP~VAG~aALLlsa~k~~~p~lTp~~Ik~aL~~TA~~~~~~-----------~~~~~~~ 588 (1377)
..|..++|||||||||||++|||+|+ +|+|+|++||++|++||.+++.. +..++.+
T Consensus 408 ~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~----~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~~~~a~~~~~ 483 (649)
T 3i6s_A 408 SIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAA----HPEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAATPLDM 483 (649)
T ss_dssp EETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHH----STTCCHHHHHHHHHHTCBCBCTTSSBCEETTTSSBCCHHHH
T ss_pred CCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHH----CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 55665446664032466420068788999999875----78999999999996306354678984213566775776779
Q ss_pred CCCCCCHHHHHH--------------HHHHCCCCCC----E---EEE--EEECCCCCCCCCEEEEEEEC-CCCCCCE--E
Q ss_conf 345049989999--------------9995299982----4---589--99715899887300299803-8888860--7
Q 000645 589 GHGLLQVDKAYE--------------YVQQYGNVPC----V---SYQ--IKINQSGKLTPTYRGIYLRD-AGASQQS--T 642 (1377)
Q Consensus 589 G~GlIdv~kAv~--------------~l~~~~~~p~----~---~~~--vsv~~~~~~~~~~rGIylR~-~~~~~~~--~ 642 (1377)
|+|+||+.+|++ ++....-... + .+. +.- ... .-+.-.|.+.. ....... .
T Consensus 484 GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~-~~~--~lNyPs~~~~~~~~~~~~~~~~ 560 (649)
T 3i6s_A 484 GAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN-PSA--DLNYPSFIALYSIEGNFTLLEQ 560 (649)
T ss_dssp TTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC-CCC--CCCCSSEEEEECCSSCCCCEEE
T ss_pred CEEEECHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCC-CHH--HCCCCCEEEECCCCCCCCCCEE
T ss_conf 8055479996595632447730678864147998222225635877677888-642--3478847802356887754308
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEC-CCCEEEC--CCCEEEEEEECCCCC-CCCEEEEEEEEEECC
Q ss_conf 999996321047878755544711799984279745972-7503304--884599999908999-997069999999658
Q 000645 643 EWTVQVEPKFHEDASNLEELVPFEECIELHSTDKAVLRA-PEYLLLT--HNGRSFNVVVDPTNL-EDGLHYYEIYGIDCK 718 (1377)
Q Consensus 643 ~~tV~v~p~f~~~~~~~~~~~~~~~~v~l~~~~~~wV~v-P~~l~l~--~~~~~~~V~VDp~~L-~~G~h~~~i~~~D~~ 718 (1377)
+++-+|+ +-+.. ....++.+......-|+| |..+... +...+|.|++..+.. ..+..++.|...|..
T Consensus 561 ~~~Rtvt----nvg~~-----~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w~~~~ 631 (649)
T 3i6s_A 561 KFKRTVT----NVGKG-----AATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQN 631 (649)
T ss_dssp EEEEEEE----ECC-------CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEEEETT
T ss_pred EEEEEEE----EECCC-----CCEEEEEEECCCCCEEEEECCEEEEECCCCEEEEEEEEEECCCCCCCEEEEEEEEECCC
T ss_conf 9998899----71799-----85899999069997899988978981189889999999964357886589999998389
Q ss_pred CCCCCCEEEEEEEEEE
Q ss_conf 9999973899799990
Q 000645 719 APGRGPLFRIPVTIIK 734 (1377)
Q Consensus 719 ~~~~g~~~~IPvTvv~ 734 (1377)
..+..|+||.|..
T Consensus 632 ---~~h~vrsPi~v~~ 644 (649)
T 3i6s_A 632 ---GNHSVRSPIVTSP 644 (649)
T ss_dssp ---SCCEEEEEEEEEE
T ss_pred ---CCEEEEEEEEEEE
T ss_conf ---9769987599997
No 5
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=1.00 E-value=1 Score=401.20 Aligned_cols=273 Identities=29% Similarity=0.352 Sum_probs=220.1
Q ss_pred EECCC----CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 74389----80999983999999999898578887778633346664335766442232136887422378999909899
Q 000645 281 VWHDG----EVWRVALDTQSLEDEPDHGKLADFAPLTNYKTERKHGVFSKLDACTFVANVYDEGNVLSIVTDSSPHGTHV 356 (1377)
Q Consensus 281 vw~~G----gV~VAVIDTGI~~id~~~~dL~~~~~l~~y~~~~~~g~f~~~d~~~~~~n~~d~g~~~~~~~D~~gHGThV 356 (1377)
+|..| +|+||||||| +|+.|++|.+... ..++|. ++. ..+.|+++|||||
T Consensus 131 ~~~~g~~G~gv~VaViDtG---id~~Hpdl~~~i~----------------~~~d~~----~~~---~~~~D~~gHGThV 184 (539)
T 3afg_A 131 MWNLGYDGSGITIGIIDTG---IDASHPDLQGKVI----------------GWVDFV----NGK---TTPYDDNGHGTHV 184 (539)
T ss_dssp CBCCSCCCTTCEEEEEESB---CCTTSGGGTTTEE----------------EEEETT----TCC---SSCCBSSSHHHHH
T ss_pred HHHCCCCCCCCEEEEEECC---CCCCCHHHHCCEE----------------EEEECC----CCC---CCCCCCCCCHHHH
T ss_conf 7735789998289999258---7789957848886----------------458787----898---9988999888899
Q ss_pred HHHHHCCCCCCC-CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHC----CCCEEEECCCCCCCCCCHHHHHH
Q ss_conf 999864699999-8654238973999997149999766722599999999959----99299968689999998379999
Q 000645 357 AGIATAFNPEEP-LLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEH----KCDLINMSYGEPTLLPDYGRFID 431 (1377)
Q Consensus 357 AGIIAg~~~n~~-g~~GVAP~AkIi~vKV~d~~~g~~et~s~ii~Ai~~Ai~~----gadVINmS~G~~~~~~~~~~~~~ 431 (1377)
||||||.+.+.. .+.||||+|+|+++|+++..+.+ +..+++++|+|++++ +++|||||||........ ..+.
T Consensus 185 Agiiag~~~~~~g~~~GvAp~A~l~~~kv~~~~g~~--~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~-~~l~ 261 (539)
T 3afg_A 185 ASIAAGTGAASNGKYKGMAPGAKLVGIKVLNGQGSG--SISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGT-DSLS 261 (539)
T ss_dssp HHHHHCCCGGGTTTTCCSCTTCEEEEEECSCTTSEE--EHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSC-SHHH
T ss_pred HHHHHCCCCCCCCCEEEECCCCEEEEEEEECCCCCC--CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-HHHH
T ss_conf 999858675677988998889989999735699986--8899999999998632532985899588888888643-3999
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 99999964994999914899999998789999999739995332721124752001589999831015899899999743
Q 000645 432 LVNEAVNKHRLVFVSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGV 511 (1377)
Q Consensus 432 ~a~e~a~~~GVivVaAAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~~s~fSSrGPt~DG~ikp 511 (1377)
.+.+.+.++|+++|+||||+|+...++.+|+ ..+++|+|||++ ..+.++.|||+||+.++++||
T Consensus 262 ~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa-~~~~vitVgA~~---------------~~~~~a~fSs~Gp~~~~~~kp 325 (539)
T 3afg_A 262 QAVNNAWDAGLVVVVAAGNSGPNKYTVGSPA-AASKVITVGAVD---------------KYDVITDFSSRGPTADNRLKP 325 (539)
T ss_dssp HHHHHHHHTTCEEEEECCSCCSSSSCCCTTT-TCSSSEEEEEEC---------------TTSCBCSSSCCCCCTTCBCCC
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCCCC-CCCCEEEEEEEC---------------CCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999998669889997888899777644776-678558996541---------------776534334778887778766
Q ss_pred EEEECCCCEEECCCC---CCC----CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 899539831111466---876----1002489840368999999999898751899999999999998139458988889
Q 000645 512 CISAPGGAVAPVSTW---TLQ----RRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGALAED 584 (1377)
Q Consensus 512 DI~APG~~I~s~~~~---~~~----~y~~~sGTSmAAP~VAG~aALLlsa~k~~~p~lTp~~Ik~aL~~TA~~~~~~~~~ 584 (1377)
||+|||.+|.+.... ..+ .|..++|||||||||||++|||+|. +|.++|.+||.+|++||+++.....+
T Consensus 326 di~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~p~~s~~~vk~~L~~tA~~~~~~~~~ 401 (539)
T 3afg_A 326 EVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQA----HPSWTPDKVKTALIETADIVKPDEIA 401 (539)
T ss_dssp SEEEECSSEEEECCTTCCCSEECSSSEEEECSHHHHHHHHHHHHHHHHHH----CTTCCHHHHHHHHHHHSBCSSGGGCS
T ss_pred CEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH----CCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 67558688882036887778887665546676478889999999999987----79999999999999629347888998
Q ss_pred CCCCCCCCCCHHHHHHHH
Q ss_conf 885334504998999999
Q 000645 585 KLSTGHGLLQVDKAYEYV 602 (1377)
Q Consensus 585 ~~~~G~GlIdv~kAv~~l 602 (1377)
+..+|+|+||+.+|+...
T Consensus 402 ~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 402 DIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp BTTTBTCBCCHHHHHTGG
T ss_pred CCCCCCCCCCHHHHHHHC
T ss_conf 567557811799996100
No 6
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=1.00 E-value=1 Score=387.74 Aligned_cols=236 Identities=23% Similarity=0.295 Sum_probs=195.4
Q ss_pred CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCC---CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 899990989999986469999986542389739999971499997---66722599999999959992999686899999
Q 000645 347 TDSSPHGTHVAGIATAFNPEEPLLNGIAPGAQLISCKIGDTRLGS---METGTGLTRAFIAAVEHKCDLINMSYGEPTLL 423 (1377)
Q Consensus 347 ~D~~gHGThVAGIIAg~~~n~~g~~GVAP~AkIi~vKV~d~~~g~---~et~s~ii~Ai~~Ai~~gadVINmS~G~~~~~ 423 (1377)
.|.+||||||||||||..++ ++.||||+|+|+++|++....+. ......++++++|+++++++|||||||.....
T Consensus 104 ~D~~gHGThVAGiiag~~~~--g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~~ 181 (357)
T 4h6x_A 104 IVLNDHACHVTSTIVGQEHS--PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANIIHCAFCRPTQT 181 (357)
T ss_dssp HHHHHHHHHHHHHHHCCTTS--SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTCSEEEEC-------
T ss_pred CCCCCCHHHHHHHHHCCCCC--CCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 67788679998987415788--7058601014876641026788854432499999999999974998785134467765
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98379999999999649949999148999999987899999997399953327211247520015899998310158998
Q 000645 424 PDYGRFIDLVNEAVNKHRLVFVSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGP 503 (1377)
Q Consensus 424 ~~~~~~~~~a~e~a~~~GVivVaAAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~~s~fSSrGP 503 (1377)
......+..+++.+..+|+++|+||||+|.. ...+|+ ..+++|+|||++ ..+.++.|||+|+
T Consensus 182 ~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~--~~~~Pa-~~~~vi~Vga~~---------------~~~~~~~fSn~G~ 243 (357)
T 4h6x_A 182 SEGEEILVQAIKKCQDNNVLIVSPTGNNSNE--SWCLPA-VLPGTLAVGAAK---------------VDGTPCHFSNWGG 243 (357)
T ss_dssp ----CHHHHHHHHHHHTTCEEEEECC------------------CEEEEEEC---------------TTSSBCTTCC---
T ss_pred CCCHHHHHHHHHHHHHCCEEEEECCCCCCCC--CCCCCC-CCCCCCEEEEEC---------------CCCCCCCCCCCCC
T ss_conf 4410679999999862885899622578987--675765-589971578743---------------6886334256788
Q ss_pred CCCCCCCEEEEECCCCEEECCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 999997438995398311114668-7610024898403689999999998987518999999999999981394589888
Q 000645 504 TADGDLGVCISAPGGAVAPVSTWT-LQRRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGALA 582 (1377)
Q Consensus 504 t~DG~ikpDI~APG~~I~s~~~~~-~~~y~~~sGTSmAAP~VAG~aALLlsa~k~~~p~lTp~~Ik~aL~~TA~~~~~~~ 582 (1377)
. ..+|||+|||.+|.+ .+. .+.+..++|||||||+|||++|||++++++.+|.+++.+||.+|++||+++....
T Consensus 244 ~---~~~~di~APG~~i~s--~~~~~~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~ 318 (357)
T 4h6x_A 244 N---NTKEGILAPGEEILG--AQPCTEEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV 318 (357)
T ss_dssp C---TTTTEEEEECSSEEE--CCTTCSCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC--------
T ss_pred C---CCCCCEEECCCCEEE--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf 8---776526616787674--25899854405818999999999999999960865799879999999994395689988
Q ss_pred -CCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf -8988533450499899999995299
Q 000645 583 -EDKLSTGHGLLQVDKAYEYVQQYGN 607 (1377)
Q Consensus 583 -~~~~~~G~GlIdv~kAv~~l~~~~~ 607 (1377)
.....+|+|+||+.+|++.+.....
T Consensus 319 ~~~~~~~G~G~vn~~~A~~~~~~~~~ 344 (357)
T 4h6x_A 319 VEEPERCLRGFVNIPGAMKVLFGQPS 344 (357)
T ss_dssp ------CTTCBCCHHHHHHHHHSCCC
T ss_pred CCCCCCCEEEEECHHHHHHHHHCCCC
T ss_conf 88766540477529999999767985
No 7
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=1.00 E-value=1 Score=381.82 Aligned_cols=262 Identities=25% Similarity=0.290 Sum_probs=207.1
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 980999983999999999898578887778633346664335766442232-1368874223789999098999998646
Q 000645 285 GEVWRVALDTQSLEDEPDHGKLADFAPLTNYKTERKHGVFSKLDACTFVAN-VYDEGNVLSIVTDSSPHGTHVAGIATAF 363 (1377)
Q Consensus 285 GgV~VAVIDTGI~~id~~~~dL~~~~~l~~y~~~~~~g~f~~~d~~~~~~n-~~d~g~~~~~~~D~~gHGThVAGIIAg~ 363 (1377)
.+|+||||||| +|..|+||.+.... .|+ +..+ ..+.+ .+..|.++|||||||||||.
T Consensus 154 ~gV~VAVIDTG---Vd~~HpdL~~~~~~-g~~---------------~~~~~~~p~~---~d~~d~~gHGThVAGiIAa~ 211 (671)
T 1r6v_A 154 TNIIVAVVDTG---VDGTHPDLEGQVIA-GYR---------------PAFDEELPAG---TDSSYGGSAGTHVAGTIAAK 211 (671)
T ss_dssp TTCEEEEEESC---CBTTSGGGTTTBCC-EEE---------------GGGTEEECTT---CBCCTTCSHHHHHHHHHHCC
T ss_pred CCCEEEEEECC---CCCCCCCCCCCEEE-CCC---------------CCCCCCCCCC---CCCCCCCCCCHHHHHHHHCC
T ss_conf 99789999589---89888410155771-454---------------5678757888---88766788432120163415
Q ss_pred CCCCCCCCCCCCCCEEEEEEECCC----CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 999998654238973999997149----9997667225999999999599929996868999999837999999999964
Q 000645 364 NPEEPLLNGIAPGAQLISCKIGDT----RLGSMETGTGLTRAFIAAVEHKCDLINMSYGEPTLLPDYGRFIDLVNEAVNK 439 (1377)
Q Consensus 364 ~~n~~g~~GVAP~AkIi~vKV~d~----~~g~~et~s~ii~Ai~~Ai~~gadVINmS~G~~~~~~~~~~~~~~a~e~a~~ 439 (1377)
. |+.++.||||+|+|+++|+++. ..++......++++|+||++++++|||||||.... ...++.+++.+.+
T Consensus 212 ~-ng~gv~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~~----s~~l~~Ai~~A~~ 286 (671)
T 1r6v_A 212 K-DGKGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWGY----SYTMKEAFDYAME 286 (671)
T ss_dssp C-SSSSCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSCC----CHHHHHHHHHHHH
T ss_pred C-CCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC----CHHHHHHHHHHHH
T ss_conf 7-8886177878998999991067655678874688999999999998699799957878877----8999999999986
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 9949999148999999987899999997399953327211247520015899998---3101589989999974389953
Q 000645 440 HRLVFVSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGL---EYTWSSRGPTADGDLGVCISAP 516 (1377)
Q Consensus 440 ~GVivVaAAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~---~s~fSSrGPt~DG~ikpDI~AP 516 (1377)
+|+++|+||||+|... ...+|+ ..+++|+|||++ ..+. ++.|||+||. +||+||
T Consensus 287 ~GvlvVaAAGN~g~~~-~~~yPA-~~~~VItVgA~d---------------~~g~~~~~a~fSn~G~~------vdv~AP 343 (671)
T 1r6v_A 287 HGVVMVVSAGNNTSDS-HHQYPA-GYPGVIQVAALD---------------YYGGTFRVAGFSSRSDG------VSVGAP 343 (671)
T ss_dssp TTCEEEEECCSCSSSC-CCCBTT-TSTTCEEEEEEE---------------EETTEEEECSSSCCCTT------EEEEEE
T ss_pred CCCEEEEECCCCCCCC-CCCCCC-CCCCEEEEEEEC---------------CCCCCEEECCCCCCCCC------EEEEEC
T ss_conf 8988999578888777-766755-578759999886---------------79984123564689997------269956
Q ss_pred CCCEEEC-CCC---------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 9831111-466---------------876100248984036899999999989875189999999999999813945898
Q 000645 517 GGAVAPV-STW---------------TLQRRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGA 580 (1377)
Q Consensus 517 G~~I~s~-~~~---------------~~~~y~~~sGTSmAAP~VAG~aALLlsa~k~~~p~lTp~~Ik~aL~~TA~~~~~ 580 (1377)
|.+|.+. +.. ..+.|..++|||||||||||++|||+|. +|.++|.+||++|++||.++..
T Consensus 344 G~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~----~P~lt~~~Vr~~L~~TA~~~~~ 419 (671)
T 1r6v_A 344 GVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQK----FPNAKPWQIRKLLENTAFDFNG 419 (671)
T ss_dssp CSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHH----CTTCCHHHHHHHHHHHCBCSSS
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH----CCCCCHHHHHHHHHHHCCCCCC
T ss_conf 877785157877655456654211258986487647637889999999999977----8899999999999975837788
Q ss_pred CCCCCCCCCCCCCCHHHHHHH
Q ss_conf 888988533450499899999
Q 000645 581 LAEDKLSTGHGLLQVDKAYEY 601 (1377)
Q Consensus 581 ~~~~~~~~G~GlIdv~kAv~~ 601 (1377)
.. .+..+|||++|+.+|++.
T Consensus 420 ~g-~d~~~G~G~vna~~Al~~ 439 (671)
T 1r6v_A 420 NG-WDHDTGYGLVKLDAALQG 439 (671)
T ss_dssp SS-CBTTTBTCBCCHHHHHHC
T ss_pred CC-CCCCCCCCEECHHHHHHH
T ss_conf 88-777855435189998202
No 8
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=1.00 E-value=1 Score=380.34 Aligned_cols=274 Identities=23% Similarity=0.267 Sum_probs=212.5
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 98099998399999999989857888777863334666433576644223213688742237899990989999986469
Q 000645 285 GEVWRVALDTQSLEDEPDHGKLADFAPLTNYKTERKHGVFSKLDACTFVANVYDEGNVLSIVTDSSPHGTHVAGIATAFN 364 (1377)
Q Consensus 285 GgV~VAVIDTGI~~id~~~~dL~~~~~l~~y~~~~~~g~f~~~d~~~~~~n~~d~g~~~~~~~D~~gHGThVAGIIAg~~ 364 (1377)
.+|+||||||| +++.|++|.+............ ..|..+..+.........|.++|||||||||+|++
T Consensus 146 ~gv~VaViDtG---id~~Hp~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g 213 (471)
T 3t41_A 146 ANTKIAIIDTG---VMKNHDDLKNNFSTDSKNLVPL---------NGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANG 213 (471)
T ss_dssp CCCCEEEEESC---CCTTCTTTTTTBCTTCEECCCT---------TCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBS
T ss_pred CCCEEEEEECC---CCCCCHHHHCCCCCCCCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCC
T ss_conf 98189999399---8989955753766677534557---------87457773447887777677785005653000378
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC------------CCHHHHHHH
Q ss_conf 99998654238973999997149999766722599999999959992999686899999------------983799999
Q 000645 365 PEEPLLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEHKCDLINMSYGEPTLL------------PDYGRFIDL 432 (1377)
Q Consensus 365 ~n~~g~~GVAP~AkIi~vKV~d~~~g~~et~s~ii~Ai~~Ai~~gadVINmS~G~~~~~------------~~~~~~~~~ 432 (1377)
+ +.||||+|+|+++|+++...+ ...++++||+|+++++++|||||||..... ......+..
T Consensus 214 ~----~~GvAp~a~l~~~kv~~~~~~---~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (471)
T 3t41_A 214 K----LIGVAPNNKFTMYRVFGSKKT---ELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQK 286 (471)
T ss_dssp S----SBCSSTTSCEEEEECCSSSCC---CHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHH
T ss_pred C----EEEECCCCEEEEEEECCCCCC---CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 6----068889985999981268987---689999999999867998999689878777544566543222026799999
Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCC----------------CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999964994999914899999998----------------789999999739995332721124752001589999831
Q 000645 433 VNEAVNKHRLVFVSSAGNSGPALNT----------------VGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGLEY 496 (1377)
Q Consensus 433 a~e~a~~~GVivVaAAGN~G~~~~t----------------vg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~~s 496 (1377)
+++.+.++|+++|+||||+|...+. +.+|+ ..+++|+|||++ ..+.++
T Consensus 287 ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa-~~~~vitVgA~~---------------~~~~~a 350 (471)
T 3t41_A 287 AINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPA-SMDNVVTVGSTD---------------QKSNLS 350 (471)
T ss_dssp HHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETT-TSTTEEEEEEEC---------------TTSSBC
T ss_pred HHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCC-CCCCEEEEEEEC---------------CCCCCC
T ss_conf 9999984997899974899867776433455666566775011665-579749999517---------------989888
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCEE--------------------ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 0158998999997438995398311--------------------11466876100248984036899999999989875
Q 000645 497 TWSSRGPTADGDLGVCISAPGGAVA--------------------PVSTWTLQRRMLMNGTSMASPSACGGIALLISAMK 556 (1377)
Q Consensus 497 ~fSSrGPt~DG~ikpDI~APG~~I~--------------------s~~~~~~~~y~~~sGTSmAAP~VAG~aALLlsa~k 556 (1377)
.||++||.. |||+|||++|. .++++..+.|..++|||||||+|||++|||+++
T Consensus 351 ~fS~~G~~~-----~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~~~~~~sGTS~AaP~VAG~aAll~~~-- 423 (471)
T 3t41_A 351 EFSNFGMNY-----TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNGRYIYQAGTALATPKVSGALALIIDK-- 423 (471)
T ss_dssp TTCCBCTTT-----CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTSSEEEECSHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCCCCCC-----CEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHH--
T ss_conf 766899999-----8699558873333445654334555666750683279998785254688789999999999986--
Q ss_pred HCCC-CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 1899-99999999999813945898888988533450499899999995
Q 000645 557 ANAI-PVSPYTVRKAVENTSVPIGALAEDKLSTGHGLLQVDKAYEYVQQ 604 (1377)
Q Consensus 557 ~~~p-~lTp~~Ik~aL~~TA~~~~~~~~~~~~~G~GlIdv~kAv~~l~~ 604 (1377)
+| .++|.+|+.+|++||.+... .++..+|||+||+.+|++.+.+
T Consensus 424 --~p~~~~~~~v~~~L~~tA~~~~~--~~~~~~G~G~vd~~~Al~~a~~ 468 (471)
T 3t41_A 424 --YHLEKHPDKAIELLYQHGTSKNN--KPFSRYGHGELDVYKALNVANQ 468 (471)
T ss_dssp --HTCTTCHHHHHHHHHHHSBCCSC--CCHHHHTTCBBCHHHHTTTTCC
T ss_pred --CCCCCCHHHHHHHHHHHCCCCCC--CCCCCCCCCHHCHHHHHHHHHH
T ss_conf --16789999999999984877778--9967655674379999998775
No 9
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=1.00 E-value=1 Score=379.07 Aligned_cols=271 Identities=23% Similarity=0.252 Sum_probs=218.8
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 98099998399999999989857888777863334666433576644223213688742237899990989999986469
Q 000645 285 GEVWRVALDTQSLEDEPDHGKLADFAPLTNYKTERKHGVFSKLDACTFVANVYDEGNVLSIVTDSSPHGTHVAGIATAFN 364 (1377)
Q Consensus 285 GgV~VAVIDTGI~~id~~~~dL~~~~~l~~y~~~~~~g~f~~~d~~~~~~n~~d~g~~~~~~~D~~gHGThVAGIIAg~~ 364 (1377)
.+|+||||||| +|++|++|.+.... ..++. +... .....|.++|||||||||+|..
T Consensus 8 ~gV~VaViDtG---id~~Hpdl~g~~~~----------------~~~~~----~~~~-~~~d~~~~gHGT~VAGiiag~~ 63 (282)
T 3zxy_A 8 HNIRVAILDGP---VDIAHPCFQGADLT----------------VLPTL----APTA-ARSDGFMSAHGTHVASIIFGQP 63 (282)
T ss_dssp TTSEEEEEESC---CCTTSGGGTTCEEE----------------ECCCS----SCCC-CCTTCHHHHHHHHHHHHHHCCT
T ss_pred CCCEEEEECCC---CCCCCHHHCCCEEE----------------CCCCC----CCCC-CCCCCCCCCCCCCEEEHHHCCC
T ss_conf 99899997489---89999667788031----------------47677----8998-8889988885641201312468
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 99998654238973999997149999766722599999999959992999686899999983799999999996499499
Q 000645 365 PEEPLLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEHKCDLINMSYGEPTLLPDYGRFIDLVNEAVNKHRLVF 444 (1377)
Q Consensus 365 ~n~~g~~GVAP~AkIi~vKV~d~~~g~~et~s~ii~Ai~~Ai~~gadVINmS~G~~~~~~~~~~~~~~a~e~a~~~GViv 444 (1377)
++ ++.||||+|+|+++|++....+.. +...++++|+|+++++++|||||||...........++.+++.+..+|+++
T Consensus 64 ~~--~~~GvAp~a~l~~~kv~~~~~~~~-~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gi~v 140 (282)
T 3zxy_A 64 ET--SVPGIAPQCRGLIVPIFSDDRRRI-TQLDLARGIERAVNAGAHIINISGGELTDFGEADGWLENAVSLCRQNNVLL 140 (282)
T ss_dssp TS--SSCCSSTTSEEEEEECSCSSSSCC-CHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEE
T ss_pred CC--EEEEECCCCCEEEEEEECCCCCCC-HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 73--363103532057667512334643-099999998776405970885467666656666689999999876327447
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECC
Q ss_conf 99148999999987899999997399953327211247520015899998310158998999997438995398311114
Q 000645 445 VSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVCISAPGGAVAPVS 524 (1377)
Q Consensus 445 VaAAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~~s~fSSrGPt~DG~ikpDI~APG~~I~s~~ 524 (1377)
|+||||+|.. ...+|+ ..+++|+|||++ ..+.++.||++|+. ..+||++|||.+|. +
T Consensus 141 V~AaGN~g~~--~~~~Pa-~~~~vi~Vga~~---------------~~~~~~~~S~~~~~---~~~~di~ApG~~i~--s 197 (282)
T 3zxy_A 141 VAAAGNNGCD--CLHVPA-ALPAVLAVGAMD---------------DHGHPLDFSNWGST---YEQQGILAPGEDIL--G 197 (282)
T ss_dssp EEECCSSCSS--CEEETT-TSTTCEEEEEEC---------------TTSCBCSSSCCCHH---HHHHEEEEECSSEE--E
T ss_pred EEECCCCCCC--CCCCCC-CCCEEEEEEEEC---------------CCCCCCCCCCCCCC---CCCCCEECCCCCEE--E
T ss_conf 9824667886--556765-444358999974---------------89963234677887---56552302676523--4
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 668761002489840368999999999898751899999999999998139458988-8898853345049989999999
Q 000645 525 TWTLQRRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGAL-AEDKLSTGHGLLQVDKAYEYVQ 603 (1377)
Q Consensus 525 ~~~~~~y~~~sGTSmAAP~VAG~aALLlsa~k~~~p~lTp~~Ik~aL~~TA~~~~~~-~~~~~~~G~GlIdv~kAv~~l~ 603 (1377)
.+..+.|..++|||||||+|||++|||++++++.+|.++|.+||++|++||+++... +.....+|+|+||+.+|++.++
T Consensus 198 ~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~~~~~~~~~G~G~ln~~~A~~~~~ 277 (282)
T 3zxy_A 198 AKPGGGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDDAPEQARRCLAGRLNVSGAFTLLK 277 (282)
T ss_dssp ECTTSCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-------CGGGTTCBCCHHHHHHHHH
T ss_pred ECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEECCCCCCCCCCCEEEEEECHHHHHHHHH
T ss_conf 53899525368984643678799999999747527999899999999941953788998766744552837999999875
Q ss_pred HC
Q ss_conf 52
Q 000645 604 QY 605 (1377)
Q Consensus 604 ~~ 605 (1377)
..
T Consensus 278 ~g 279 (282)
T 3zxy_A 278 GG 279 (282)
T ss_dssp HT
T ss_pred CC
T ss_conf 75
No 10
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=1.00 E-value=1 Score=378.08 Aligned_cols=269 Identities=23% Similarity=0.257 Sum_probs=211.8
Q ss_pred EEC--CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 743--898099998399999999989857888777863334666433576644223213688742237899990989999
Q 000645 281 VWH--DGEVWRVALDTQSLEDEPDHGKLADFAPLTNYKTERKHGVFSKLDACTFVANVYDEGNVLSIVTDSSPHGTHVAG 358 (1377)
Q Consensus 281 vw~--~GgV~VAVIDTGI~~id~~~~dL~~~~~l~~y~~~~~~g~f~~~d~~~~~~n~~d~g~~~~~~~D~~gHGThVAG 358 (1377)
+|. .++|+||||||| +|+.|++|.+.... +.++ ...++ ...+.|..+|||||||
T Consensus 16 ~w~~~g~gv~VaViDtG---vd~~Hp~l~~~~~~----------------~~~~----~~~~~-~~~~~d~~gHGT~vAg 71 (441)
T 1y9z_A 16 LSDSQAGNRTICIIDSG---YDRSHNDLNANNVT----------------GTNN----SGTGN-WYQPGNNNAHGTHVAG 71 (441)
T ss_dssp SCCTTGGGCEEEEEESC---CCTTSTTTTTSEEE----------------ECCC----TTSCC-TTCCCSSCCHHHHHHH
T ss_pred HHHCCCCCCEEEEECCC---CCCCCHHHHCCCCC----------------CCCC----CCCCC-CCCCCCCCCCHHHHHH
T ss_conf 64257998389998288---79999567457333----------------7655----78887-7888889985779999
Q ss_pred HHHCCCCCCCCCCCCCCCC--EEEEEEECCCCCCCCCCHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf 9864699999865423897--3999997149999766722599999999959-992999686899999983799999999
Q 000645 359 IATAFNPEEPLLNGIAPGA--QLISCKIGDTRLGSMETGTGLTRAFIAAVEH-KCDLINMSYGEPTLLPDYGRFIDLVNE 435 (1377)
Q Consensus 359 IIAg~~~n~~g~~GVAP~A--kIi~vKV~d~~~g~~et~s~ii~Ai~~Ai~~-gadVINmS~G~~~~~~~~~~~~~~a~e 435 (1377)
||+|..++ .++.||||+| +|+++|+++..+.+ +..+++++|+|++++ +++|||||||....+ .....+++
T Consensus 72 iia~~~~~-~g~~GvAP~a~~~l~~~kv~~~~g~~--~~~~~~~ai~~a~~~~g~~Vin~S~G~~~~~----~~~~~ai~ 144 (441)
T 1y9z_A 72 TIAAIANN-EGVVGVMPNQNANIHIVKVFNEAGWG--YSSSLVAAIDTCVNSGGANVVTMSLGGSGST----TTERNALN 144 (441)
T ss_dssp HHHCCCSS-SBCCCSSCSSCSEEEEEECEETTEEC--CSSCHHHHHHHHHHTTCCSEEEECCCBSCCB----HHHHHHHH
T ss_pred HHHCCCCC-CCCEEECCCCCCEEEEEEEECCCCCC--CHHHHHHHHHHHHHHCCCCEEEECCCCCCCC----HHHHHHHH
T ss_conf 98526588-97368647888879999974789984--8999999999999725983899588878988----89999999
Q ss_pred HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 99649949999148999999987899999997399953327211247520015899998310158998999997438995
Q 000645 436 AVNKHRLVFVSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVCISA 515 (1377)
Q Consensus 436 ~a~~~GVivVaAAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~~s~fSSrGPt~DG~ikpDI~A 515 (1377)
.+.++|+++|+||||+|.. ...+|+ ..+++|+|||++ ..+.++.||++|+. +||+|
T Consensus 145 ~a~~~gv~vV~AAGN~g~~--~~~~Pa-~~~~vi~VgA~~---------------~~~~~~~~S~~g~~------vdv~A 200 (441)
T 1y9z_A 145 THYNNGVLLIAAAGNAGDS--SYSYPA-SYDSVMSVAAVD---------------SNLDHAAFSQYTDQ------VEISG 200 (441)
T ss_dssp HHHHTTCEEEEECCSSSSS--BCCBTT-TSTTEEEEEEEC---------------TTCCBCTTSCCCTT------EEEEE
T ss_pred HHHHCCCEEEEECCCCCCC--CCCCCC-CCCCEEEEEEEC---------------CCCCCCCCCCCCCC------EEEEE
T ss_conf 9997899899966999898--887877-799869999887---------------99987764568996------48996
Q ss_pred CCCCEEECCCC---------------------------------------------------------------------
Q ss_conf 39831111466---------------------------------------------------------------------
Q 000645 516 PGGAVAPVSTW--------------------------------------------------------------------- 526 (1377)
Q Consensus 516 PG~~I~s~~~~--------------------------------------------------------------------- 526 (1377)
||..|.+....
T Consensus 201 pG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~ 280 (441)
T 1y9z_A 201 PGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVE 280 (441)
T ss_dssp ECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEE
T ss_pred CCCCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 66876625667886311010156201345657664445677645443224422100010456655555777655589996
Q ss_pred -----------------------------------------------------------------------------CCC
Q ss_conf -----------------------------------------------------------------------------876
Q 000645 527 -----------------------------------------------------------------------------TLQ 529 (1377)
Q Consensus 527 -----------------------------------------------------------------------------~~~ 529 (1377)
..+
T Consensus 281 rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~t~~~~~~~ 360 (441)
T 1y9z_A 281 RVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQ 360 (441)
T ss_dssp CCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSEEEEEEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 25667665307999999996597499999478765544321245566765547997288899999874687512355688
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 10024898403689999999998987518999999999999981394589888898853345049989999999529998
Q 000645 530 RRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGALAEDKLSTGHGLLQVDKAYEYVQQYGNVP 609 (1377)
Q Consensus 530 ~y~~~sGTSmAAP~VAG~aALLlsa~k~~~p~lTp~~Ik~aL~~TA~~~~~~~~~~~~~G~GlIdv~kAv~~l~~~~~~p 609 (1377)
.|..++|||||||||||++|||+|+ +|.|+|.+||.+|++||+++.... .+..||+|+||+.+|++++......|
T Consensus 361 ~y~~~sGTSmAaP~VAG~aALl~~~----~p~~sp~~ik~~L~~TA~~~~~~g-~~~~~G~G~vn~~~A~~~~~~lc~~~ 435 (441)
T 1y9z_A 361 DYEYYNGTSMATPHVSGVATLVWSY----HPECSASQVRAALNATADDLSVAG-RDNQTGYGMINAVAAKAYLDESCTGP 435 (441)
T ss_dssp SEEEECSHHHHHHHHHHHHHHHHHH----CTTSCHHHHHHHHHHHSBCCSSSS-CBTTTBTCBCCHHHHHHHHHHCTTCC
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHH----CCCCCHHHHHHHHHHHCHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 7524536415775310489999877----778999999999985060004689-84233665167999999988631679
Done!