Query 000647
Match_columns 1374
No_of_seqs 697 out of 5093
Neff 7.5
Searched_HMMs 46136
Date Mon Apr 1 21:23:38 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000647.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000647hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 1E-131 3E-136 1240.9 96.4 1133 102-1364 25-1201(1228)
2 KOG0054 Multidrug resistance-a 100.0 4E-119 9E-124 1155.8 106.8 1109 107-1363 203-1349(1381)
3 PTZ00265 multidrug resistance 100.0 3E-110 7E-115 1125.7 121.5 1194 42-1364 3-1435(1466)
4 PLN03130 ABC transporter C fam 100.0 1E-109 3E-114 1130.0 117.0 1099 107-1363 303-1448(1622)
5 PLN03232 ABC transporter C fam 100.0 4E-109 8E-114 1127.3 115.3 1097 107-1363 303-1445(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 7E-106 1E-110 1096.8 113.3 1110 107-1364 319-1496(1522)
7 PTZ00243 ABC transporter; Prov 100.0 5E-101 1E-105 1045.3 116.5 1121 107-1363 246-1520(1560)
8 TIGR01271 CFTR_protein cystic 100.0 1E-100 2E-105 1042.0 112.7 1102 109-1363 84-1427(1490)
9 KOG0060 Long-chain acyl-CoA tr 100.0 1E-91 2.2E-96 810.7 51.5 629 24-660 2-652 (659)
10 COG4178 ABC-type uncharacteriz 100.0 4E-78 8.6E-83 723.3 58.8 547 84-653 25-592 (604)
11 KOG0064 Peroxisomal long-chain 100.0 4E-79 8.7E-84 693.6 47.4 569 84-658 97-692 (728)
12 KOG0060 Long-chain acyl-CoA tr 100.0 9.1E-78 2E-82 694.9 47.0 574 738-1373 61-651 (659)
13 TIGR00954 3a01203 Peroxysomal 100.0 1.3E-69 2.7E-74 688.7 73.1 562 85-654 76-658 (659)
14 KOG0058 Peptide exporter, ABC 100.0 8.8E-68 1.9E-72 632.8 59.3 529 85-649 132-677 (716)
15 KOG0058 Peptide exporter, ABC 100.0 6.5E-69 1.4E-73 642.5 46.8 467 802-1363 196-678 (716)
16 KOG0064 Peroxisomal long-chain 100.0 1.1E-67 2.3E-72 600.6 46.4 563 740-1373 99-693 (728)
17 COG4178 ABC-type uncharacteriz 100.0 1.1E-63 2.3E-68 599.1 54.4 514 774-1369 62-594 (604)
18 TIGR00958 3a01208 Conjugate Tr 100.0 2.7E-59 5.9E-64 601.7 67.0 528 87-649 148-688 (711)
19 TIGR00954 3a01203 Peroxysomal 100.0 1E-58 2.2E-63 589.0 66.0 565 741-1369 78-659 (659)
20 COG2274 SunT ABC-type bacterio 100.0 1.4E-58 3.1E-63 578.3 64.3 526 88-649 142-682 (709)
21 KOG0055 Multidrug/pheromone ex 100.0 9.3E-59 2E-63 583.8 61.8 529 87-649 651-1199(1228)
22 PRK11174 cysteine/glutathione 100.0 4.4E-58 9.6E-63 582.0 67.0 533 88-649 10-558 (588)
23 COG1123 ATPase components of v 100.0 1.1E-60 2.5E-65 566.4 37.4 198 444-649 5-230 (539)
24 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.7E-57 5.9E-62 586.2 67.9 534 88-649 142-686 (710)
25 TIGR01193 bacteriocin_ABC ABC- 100.0 4.5E-57 9.8E-62 583.5 67.1 529 88-649 144-683 (708)
26 TIGR02868 CydC thiol reductant 100.0 9.5E-57 2.1E-61 562.9 65.3 503 107-635 15-529 (529)
27 PRK13549 xylose transporter AT 100.0 1.5E-59 3.3E-64 583.5 39.8 198 443-649 4-218 (506)
28 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.7E-56 3.8E-61 576.1 68.2 510 107-649 138-659 (686)
29 TIGR03375 type_I_sec_LssB type 100.0 2.3E-56 5.1E-61 575.6 66.7 527 88-649 135-674 (694)
30 PRK11176 lipid transporter ATP 100.0 4.3E-56 9.3E-61 563.5 66.7 530 86-649 11-553 (582)
31 PRK10261 glutathione transport 100.0 8.7E-59 1.9E-63 587.4 40.7 200 442-649 10-244 (623)
32 PRK09700 D-allose transporter 100.0 1E-58 2.2E-63 577.1 40.5 197 444-649 5-220 (510)
33 PRK10762 D-ribose transporter 100.0 1.3E-58 2.8E-63 574.5 39.9 197 444-649 4-216 (501)
34 TIGR02203 MsbA_lipidA lipid A 100.0 9.9E-56 2.1E-60 559.4 65.6 514 107-649 16-542 (571)
35 PRK10790 putative multidrug tr 100.0 1.9E-55 4.1E-60 558.1 67.0 532 81-649 4-549 (592)
36 PRK15134 microcin C ABC transp 100.0 1.9E-58 4.1E-63 576.8 38.5 198 444-649 5-232 (529)
37 TIGR03269 met_CoM_red_A2 methy 100.0 2.3E-58 5.1E-63 575.2 39.2 196 445-649 1-244 (520)
38 PRK11288 araG L-arabinose tran 100.0 3.1E-58 6.7E-63 571.1 39.9 197 444-649 4-215 (501)
39 PRK13657 cyclic beta-1,2-gluca 100.0 2.1E-55 4.6E-60 556.9 66.2 528 86-649 5-544 (588)
40 TIGR02857 CydD thiol reductant 100.0 2.8E-55 6.1E-60 549.6 66.2 510 107-647 5-529 (529)
41 PRK11160 cysteine/glutathione 100.0 4.5E-55 9.7E-60 550.7 67.5 528 88-649 4-548 (574)
42 PRK15064 ABC transporter ATP-b 100.0 6.7E-57 1.5E-61 562.9 49.3 191 445-649 2-227 (530)
43 TIGR02633 xylG D-xylose ABC tr 100.0 6.4E-58 1.4E-62 568.9 38.9 196 445-649 2-216 (500)
44 COG1132 MdlB ABC-type multidru 100.0 6.7E-55 1.5E-59 550.0 66.3 509 107-649 16-538 (567)
45 PRK11819 putative ABC transpor 100.0 1.5E-56 3.3E-61 561.5 49.3 193 443-649 5-235 (556)
46 COG2274 SunT ABC-type bacterio 100.0 4.2E-56 9.2E-61 556.1 52.0 258 1040-1363 420-683 (709)
47 TIGR00958 3a01208 Conjugate Tr 100.0 5.4E-56 1.2E-60 571.1 52.9 463 809-1363 212-689 (711)
48 TIGR02204 MsbA_rel ABC transpo 100.0 2.1E-54 4.5E-59 547.8 66.0 515 107-649 20-549 (576)
49 PRK15439 autoinducer 2 ABC tra 100.0 5.9E-57 1.3E-61 560.0 41.7 194 443-649 10-215 (510)
50 TIGR01192 chvA glucan exporter 100.0 5.9E-54 1.3E-58 541.2 67.9 526 88-649 7-544 (585)
51 PRK10982 galactose/methyl gala 100.0 3.7E-57 8.1E-62 560.5 37.8 194 447-649 1-209 (491)
52 COG4987 CydC ABC-type transpor 100.0 1.9E-54 4.2E-59 500.7 57.1 526 92-649 5-547 (573)
53 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 8.6E-56 1.9E-60 554.8 49.4 201 444-649 4-233 (552)
54 TIGR01846 type_I_sec_HlyB type 100.0 4.9E-54 1.1E-58 553.7 66.5 512 107-649 141-666 (694)
55 PRK10938 putative molybdenum t 100.0 1E-56 2.2E-61 556.8 37.6 189 444-649 3-210 (490)
56 COG4988 CydD ABC-type transpor 100.0 4.4E-53 9.6E-58 498.9 64.0 510 111-649 6-529 (559)
57 TIGR02868 CydC thiol reductant 100.0 1.1E-54 2.4E-59 544.2 53.7 450 811-1348 66-529 (529)
58 PTZ00265 multidrug resistance 100.0 1.1E-53 2.4E-58 577.5 66.6 531 87-649 812-1433(1466)
59 PRK11174 cysteine/glutathione 100.0 1.1E-54 2.3E-59 551.1 53.4 469 808-1363 73-559 (588)
60 PRK10636 putative ABC transpor 100.0 2.7E-55 5.8E-60 555.8 45.0 191 445-649 2-221 (638)
61 PRK10789 putative multidrug tr 100.0 3.1E-53 6.7E-58 533.9 63.4 507 115-649 5-524 (569)
62 KOG0057 Mitochondrial Fe/S clu 100.0 2.2E-53 4.7E-58 492.1 55.5 530 85-650 10-561 (591)
63 COG1132 MdlB ABC-type multidru 100.0 4.4E-54 9.6E-59 542.5 51.9 256 1041-1364 280-540 (567)
64 TIGR00956 3a01205 Pleiotropic 100.0 4.1E-54 9E-59 581.6 55.1 189 458-649 74-286 (1394)
65 COG4172 ABC-type uncharacteriz 100.0 8.8E-56 1.9E-60 491.6 31.3 199 443-649 5-233 (534)
66 TIGR01257 rim_protein retinal- 100.0 5.3E-53 1.2E-57 566.8 62.5 199 443-649 927-1135(2272)
67 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 9.8E-54 2.1E-58 550.6 53.4 461 808-1363 186-660 (686)
68 TIGR01842 type_I_sec_PrtD type 100.0 5E-52 1.1E-56 521.0 66.7 506 107-649 8-528 (544)
69 PRK11147 ABC transporter ATPas 100.0 4.8E-54 1E-58 545.9 47.1 190 444-649 3-228 (635)
70 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.7E-53 5.8E-58 549.0 53.0 469 809-1363 205-687 (710)
71 TIGR01193 bacteriocin_ABC ABC- 100.0 3.1E-53 6.7E-58 547.8 52.4 463 811-1364 209-685 (708)
72 PRK11160 cysteine/glutathione 100.0 5.3E-52 1.1E-56 522.9 55.0 461 813-1364 75-550 (574)
73 PRK11176 lipid transporter ATP 100.0 4.2E-52 9.1E-57 527.0 53.4 462 810-1363 77-554 (582)
74 TIGR02203 MsbA_lipidA lipid A 100.0 3.3E-52 7.2E-57 527.3 52.1 466 806-1363 62-543 (571)
75 TIGR03375 type_I_sec_LssB type 100.0 4E-52 8.6E-57 536.4 53.7 462 810-1363 199-675 (694)
76 TIGR02857 CydD thiol reductant 100.0 3.9E-52 8.5E-57 521.2 52.0 464 805-1360 51-529 (529)
77 PLN03073 ABC transporter F fam 100.0 1.5E-53 3.3E-58 540.4 38.5 192 1098-1363 507-700 (718)
78 KOG0056 Heavy metal exporter H 100.0 2.1E-54 4.5E-59 486.5 27.1 259 1037-1363 483-748 (790)
79 KOG0057 Mitochondrial Fe/S clu 100.0 5.6E-52 1.2E-56 480.4 46.2 208 1097-1363 349-561 (591)
80 PRK10790 putative multidrug tr 100.0 1.7E-51 3.8E-56 521.9 52.3 255 1040-1364 292-551 (592)
81 PLN03130 ABC transporter C fam 100.0 1.8E-50 3.9E-55 551.3 65.3 457 165-649 970-1447(1622)
82 PRK13657 cyclic beta-1,2-gluca 100.0 2.3E-51 5E-56 520.1 51.1 457 817-1364 75-546 (588)
83 TIGR00957 MRP_assoc_pro multi 100.0 2.3E-50 5.1E-55 551.5 64.4 447 177-649 1034-1494(1522)
84 TIGR01194 cyc_pep_trnsptr cycl 100.0 4.6E-50 1E-54 503.3 60.2 507 107-649 20-545 (555)
85 PRK13409 putative ATPase RIL; 100.0 3.1E-52 6.8E-57 520.1 36.7 182 450-649 79-286 (590)
86 TIGR02204 MsbA_rel ABC transpo 100.0 1.7E-50 3.7E-55 512.0 52.3 462 813-1364 73-551 (576)
87 PTZ00243 ABC transporter; Prov 100.0 1.8E-49 3.9E-54 541.1 65.9 449 179-649 1029-1519(1560)
88 COG4987 CydC ABC-type transpor 100.0 1.2E-50 2.5E-55 469.5 45.5 245 1051-1363 298-548 (573)
89 PLN03232 ABC transporter C fam 100.0 1.6E-49 3.5E-54 542.6 64.6 463 165-649 967-1444(1495)
90 COG0488 Uup ATPase components 100.0 2.9E-51 6.2E-56 497.6 42.0 191 444-649 3-225 (530)
91 KOG0056 Heavy metal exporter H 100.0 5E-52 1.1E-56 467.4 31.9 332 294-649 405-747 (790)
92 TIGR01846 type_I_sec_HlyB type 100.0 4.1E-50 8.9E-55 517.3 53.1 461 810-1363 191-667 (694)
93 PLN03140 ABC transporter G fam 100.0 1.8E-50 4E-55 543.3 50.6 190 457-649 177-413 (1470)
94 COG4988 CydD ABC-type transpor 100.0 2.2E-49 4.7E-54 467.6 53.2 471 801-1363 43-530 (559)
95 PRK10789 putative multidrug tr 100.0 1E-49 2.2E-54 502.0 48.6 460 811-1363 49-525 (569)
96 TIGR01192 chvA glucan exporter 100.0 6.6E-49 1.4E-53 495.4 53.7 457 816-1364 74-546 (585)
97 TIGR01842 type_I_sec_PrtD type 100.0 1.3E-48 2.9E-53 490.1 56.0 460 807-1364 55-530 (544)
98 PRK10522 multidrug transporter 100.0 1.3E-47 2.7E-52 481.2 61.4 497 107-649 15-524 (547)
99 TIGR01271 CFTR_protein cystic 100.0 2.1E-47 4.5E-52 520.9 63.6 461 165-649 942-1426(1490)
100 COG5265 ATM1 ABC-type transpor 100.0 1.6E-49 3.5E-54 445.6 32.0 247 1052-1363 222-473 (497)
101 COG4618 ArpD ABC-type protease 100.0 1.2E-46 2.7E-51 431.5 52.6 502 109-649 27-546 (580)
102 KOG0054 Multidrug resistance-a 100.0 1.1E-46 2.3E-51 486.7 54.3 471 147-649 861-1348(1381)
103 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.4E-46 5.3E-51 469.7 47.3 260 1040-1364 278-547 (555)
104 COG4618 ArpD ABC-type protease 100.0 1.2E-45 2.5E-50 423.5 43.5 250 1043-1363 289-547 (580)
105 PRK10522 multidrug transporter 100.0 4E-45 8.7E-50 458.6 45.1 244 1044-1364 277-526 (547)
106 COG5265 ATM1 ABC-type transpor 100.0 4.1E-45 8.9E-50 410.3 36.3 335 296-656 131-477 (497)
107 COG1129 MglA ABC-type sugar tr 100.0 3.3E-45 7.1E-50 432.4 33.9 198 443-649 7-220 (500)
108 COG3845 ABC-type uncharacteriz 100.0 2.8E-42 6.1E-47 397.8 37.1 198 443-649 3-215 (501)
109 COG1126 GlnQ ABC-type polar am 100.0 2.3E-44 4.9E-49 375.0 17.8 197 444-649 2-211 (240)
110 COG1116 TauB ABC-type nitrate/ 100.0 6E-43 1.3E-47 376.6 21.7 198 444-650 3-207 (248)
111 PF06472 ABC_membrane_2: ABC t 100.0 7.1E-41 1.5E-45 383.8 36.6 275 85-359 7-281 (281)
112 COG1135 AbcC ABC-type metal io 100.0 6.2E-43 1.3E-47 381.9 18.0 198 444-649 1-217 (339)
113 COG1136 SalX ABC-type antimicr 100.0 1.2E-41 2.5E-46 367.4 19.5 198 445-650 2-218 (226)
114 COG2884 FtsE Predicted ATPase 100.0 1.3E-41 2.7E-46 346.3 16.6 198 444-649 1-212 (223)
115 COG1125 OpuBA ABC-type proline 100.0 1.9E-41 4.2E-46 359.0 15.7 197 444-649 1-211 (309)
116 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.8E-40 4E-45 362.9 22.4 198 443-649 3-214 (254)
117 COG1120 FepC ABC-type cobalami 100.0 1.9E-40 4.2E-45 364.8 20.7 197 444-649 2-214 (258)
118 KOG0927 Predicted transporter 100.0 5.2E-39 1.1E-43 370.9 32.2 183 1099-1353 389-571 (614)
119 COG3638 ABC-type phosphate/pho 100.0 6.5E-40 1.4E-44 346.0 18.6 203 444-655 3-228 (258)
120 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.2E-40 7E-45 376.0 17.2 206 1098-1363 1-212 (275)
121 COG3839 MalK ABC-type sugar tr 100.0 2E-39 4.2E-44 370.0 19.9 197 444-649 3-209 (338)
122 COG1124 DppF ABC-type dipeptid 100.0 3.9E-39 8.4E-44 343.3 20.2 196 444-649 3-217 (252)
123 COG1122 CbiO ABC-type cobalt t 100.0 4.9E-39 1.1E-43 354.4 19.6 198 444-649 3-214 (235)
124 COG3842 PotA ABC-type spermidi 100.0 2.5E-39 5.4E-44 371.0 17.8 198 443-649 4-212 (352)
125 COG1127 Ttg2A ABC-type transpo 100.0 9E-39 2E-43 338.3 19.4 196 442-649 6-221 (263)
126 COG1117 PstB ABC-type phosphat 100.0 2E-39 4.3E-44 336.0 14.0 201 443-649 6-223 (253)
127 COG1135 AbcC ABC-type metal io 100.0 7.1E-39 1.5E-43 350.2 14.5 199 1100-1363 2-218 (339)
128 TIGR00960 3a0501s02 Type II (G 100.0 3.5E-38 7.7E-43 349.4 19.7 197 445-649 2-213 (216)
129 TIGR02314 ABC_MetN D-methionin 100.0 4E-38 8.7E-43 368.3 20.4 198 444-649 1-216 (343)
130 COG1118 CysA ABC-type sulfate/ 100.0 4.8E-38 1E-42 342.5 17.4 197 444-649 2-213 (345)
131 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 9.9E-38 2.1E-42 346.3 19.4 197 445-649 1-215 (218)
132 COG1126 GlnQ ABC-type polar am 100.0 4.7E-38 1E-42 327.9 15.7 197 1099-1363 2-212 (240)
133 COG2884 FtsE Predicted ATPase 100.0 3.9E-38 8.5E-43 320.8 14.4 199 1100-1363 2-213 (223)
134 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.2E-37 4.7E-42 344.0 21.1 200 445-652 1-211 (220)
135 PRK11650 ugpC glycerol-3-phosp 100.0 1.8E-37 3.9E-42 365.8 21.5 198 444-649 3-210 (356)
136 cd03226 ABC_cobalt_CbiO_domain 100.0 2.3E-37 5E-42 340.0 20.4 191 447-649 2-201 (205)
137 cd03289 ABCC_CFTR2 The CFTR su 100.0 5E-37 1.1E-41 349.8 23.1 198 444-649 2-211 (275)
138 PRK14257 phosphate ABC transpo 100.0 9.2E-38 2E-42 364.8 17.3 211 1089-1363 73-300 (329)
139 COG3840 ThiQ ABC-type thiamine 100.0 3E-37 6.4E-42 311.4 17.6 194 445-649 2-205 (231)
140 cd03223 ABCD_peroxisomal_ALDP 100.0 6.8E-37 1.5E-41 324.3 21.3 166 445-653 1-166 (166)
141 COG1117 PstB ABC-type phosphat 100.0 2.3E-38 5E-43 328.1 9.7 192 1098-1348 6-208 (253)
142 COG1136 SalX ABC-type antimicr 100.0 1.5E-37 3.2E-42 335.7 15.9 204 1100-1364 2-219 (226)
143 cd03259 ABC_Carb_Solutes_like 100.0 3E-37 6.6E-42 341.2 18.8 196 445-649 1-206 (213)
144 TIGR02673 FtsE cell division A 100.0 4.1E-37 9E-42 340.4 19.8 197 445-649 2-212 (214)
145 PRK11432 fbpC ferric transport 100.0 4.4E-37 9.6E-42 361.4 21.2 198 443-649 5-212 (351)
146 cd03292 ABC_FtsE_transporter F 100.0 4.5E-37 9.7E-42 340.1 19.6 197 445-649 1-211 (214)
147 cd03261 ABC_Org_Solvent_Resist 100.0 4.3E-37 9.3E-42 345.2 19.4 196 445-649 1-212 (235)
148 PRK13647 cbiO cobalt transport 100.0 5.1E-37 1.1E-41 351.6 20.3 198 444-649 4-213 (274)
149 cd03235 ABC_Metallic_Cations A 100.0 7E-37 1.5E-41 338.3 20.5 194 447-649 2-207 (213)
150 TIGR02211 LolD_lipo_ex lipopro 100.0 9.1E-37 2E-41 339.3 20.6 197 445-649 2-216 (221)
151 PRK11629 lolD lipoprotein tran 100.0 1.1E-36 2.3E-41 341.5 21.2 199 443-649 4-220 (233)
152 cd03225 ABC_cobalt_CbiO_domain 100.0 6.1E-37 1.3E-41 338.3 18.6 195 447-649 2-209 (211)
153 cd03266 ABC_NatA_sodium_export 100.0 8.7E-37 1.9E-41 338.8 19.1 197 445-649 2-211 (218)
154 PRK13631 cbiO cobalt transport 100.0 1.4E-36 2.9E-41 354.0 21.6 200 442-649 19-251 (320)
155 PRK11248 tauB taurine transpor 100.0 2.2E-36 4.7E-41 342.8 22.5 199 445-652 2-208 (255)
156 COG4181 Predicted ABC-type tra 100.0 1.1E-36 2.3E-41 304.0 17.4 198 444-649 6-221 (228)
157 PRK10908 cell division protein 100.0 1.8E-36 4E-41 337.1 21.0 197 445-649 2-212 (222)
158 cd03296 ABC_CysA_sulfate_impor 100.0 1.8E-36 4E-41 340.9 21.2 197 444-649 2-212 (239)
159 PRK13650 cbiO cobalt transport 100.0 1.4E-36 3E-41 349.0 20.5 198 444-649 4-215 (279)
160 cd03301 ABC_MalK_N The N-termi 100.0 1.5E-36 3.1E-41 335.8 19.9 196 445-649 1-206 (213)
161 PRK13637 cbiO cobalt transport 100.0 1.3E-36 2.9E-41 350.4 20.3 197 445-649 3-220 (287)
162 TIGR03265 PhnT2 putative 2-ami 100.0 1.1E-36 2.3E-41 358.9 19.8 197 444-649 4-210 (353)
163 TIGR02315 ABC_phnC phosphonate 100.0 2E-36 4.4E-41 341.5 21.0 197 445-649 2-221 (243)
164 cd03263 ABC_subfamily_A The AB 100.0 1.3E-36 2.8E-41 337.9 18.9 197 445-649 1-207 (220)
165 PRK11247 ssuB aliphatic sulfon 100.0 4.1E-36 8.9E-41 340.1 23.1 192 443-649 11-209 (257)
166 PRK10584 putative ABC transpor 100.0 3.1E-36 6.7E-41 336.7 21.4 199 443-649 5-221 (228)
167 PRK14257 phosphate ABC transpo 100.0 2.6E-36 5.7E-41 352.6 21.6 206 440-649 76-299 (329)
168 PRK13651 cobalt transporter AT 100.0 2.1E-36 4.5E-41 350.4 20.6 197 445-649 3-240 (305)
169 PRK09452 potA putrescine/sperm 100.0 2.5E-36 5.5E-41 357.2 21.6 199 442-649 12-220 (375)
170 cd03256 ABC_PhnC_transporter A 100.0 3E-36 6.4E-41 339.8 21.2 197 445-649 1-220 (241)
171 cd03252 ABCC_Hemolysin The ABC 100.0 6E-36 1.3E-40 336.4 23.6 199 445-649 1-211 (237)
172 PRK11153 metN DL-methionine tr 100.0 2.1E-36 4.5E-41 356.4 20.6 198 444-649 1-216 (343)
173 cd03254 ABCC_Glucan_exporter_l 100.0 5.7E-36 1.2E-40 334.8 23.0 200 444-649 2-212 (229)
174 TIGR03258 PhnT 2-aminoethylpho 100.0 1.8E-36 3.8E-41 357.4 19.8 198 443-649 4-214 (362)
175 PRK13643 cbiO cobalt transport 100.0 2.1E-36 4.6E-41 348.8 20.0 198 444-649 1-219 (288)
176 cd03244 ABCC_MRP_domain2 Domai 100.0 7.3E-36 1.6E-40 332.1 23.5 199 444-649 2-212 (221)
177 KOG0062 ATPase component of AB 100.0 1.9E-35 4.2E-40 339.7 27.4 193 1098-1365 361-555 (582)
178 cd03269 ABC_putative_ATPase Th 100.0 2.6E-36 5.7E-41 332.9 19.6 196 445-649 1-203 (210)
179 cd03265 ABC_DrrA DrrA is the A 100.0 2.1E-36 4.5E-41 336.1 18.9 196 445-649 1-207 (220)
180 cd03268 ABC_BcrA_bacitracin_re 100.0 3.7E-36 8.1E-41 331.2 20.6 192 445-649 1-201 (208)
181 cd03264 ABC_drug_resistance_li 100.0 2.5E-36 5.5E-41 333.3 18.9 195 445-649 1-204 (211)
182 PRK13636 cbiO cobalt transport 100.0 3.6E-36 7.8E-41 346.3 20.8 199 443-649 4-217 (283)
183 cd03250 ABCC_MRP_domain1 Domai 100.0 1.3E-35 2.8E-40 325.9 24.2 191 445-649 1-202 (204)
184 PRK11000 maltose/maltodextrin 100.0 3.3E-36 7.1E-41 357.5 20.7 197 444-649 3-209 (369)
185 PRK10851 sulfate/thiosulfate t 100.0 5E-36 1.1E-40 353.2 22.1 197 444-649 2-212 (353)
186 cd03245 ABCC_bacteriocin_expor 100.0 1.1E-35 2.4E-40 330.4 23.6 200 444-649 2-213 (220)
187 PRK13635 cbiO cobalt transport 100.0 4.5E-36 9.8E-41 344.5 20.7 198 444-649 5-215 (279)
188 PRK13634 cbiO cobalt transport 100.0 3.2E-36 6.9E-41 347.7 19.4 197 445-649 3-221 (290)
189 PRK13644 cbiO cobalt transport 100.0 4.5E-36 9.8E-41 343.8 20.5 197 445-649 2-210 (274)
190 PRK11607 potG putrescine trans 100.0 4.7E-36 1E-40 355.6 21.0 199 442-649 17-225 (377)
191 cd03262 ABC_HisP_GlnQ_permease 100.0 4.8E-36 1E-40 331.6 19.7 196 445-649 1-210 (213)
192 PRK13632 cbiO cobalt transport 100.0 4.8E-36 1E-40 343.4 20.2 199 443-649 6-217 (271)
193 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 4.1E-36 8.9E-41 328.7 18.7 202 1099-1360 4-212 (254)
194 cd03258 ABC_MetN_methionine_tr 100.0 4.6E-36 9.9E-41 336.5 19.6 197 445-649 2-216 (233)
195 PRK13537 nodulation ABC transp 100.0 4.5E-36 9.7E-41 348.4 20.0 198 443-649 6-213 (306)
196 PRK13646 cbiO cobalt transport 100.0 4.1E-36 8.8E-41 346.3 19.5 197 445-649 3-221 (286)
197 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.3E-36 1.2E-40 336.5 19.8 196 445-649 2-207 (236)
198 cd03219 ABC_Mj1267_LivG_branch 100.0 4.3E-36 9.2E-41 337.4 19.0 196 445-649 1-218 (236)
199 PRK10247 putative ABC transpor 100.0 8.4E-36 1.8E-40 332.2 21.1 199 443-652 6-215 (225)
200 cd03253 ABCC_ATM1_transporter 100.0 1.4E-35 2.9E-40 333.3 22.9 199 445-649 1-210 (236)
201 cd03298 ABC_ThiQ_thiamine_tran 100.0 9.3E-36 2E-40 328.8 21.1 194 445-649 1-204 (211)
202 cd03260 ABC_PstB_phosphate_tra 100.0 6.3E-36 1.4E-40 334.0 19.9 198 445-649 1-215 (227)
203 TIGR01186 proV glycine betaine 100.0 3.5E-36 7.6E-41 353.7 18.4 186 456-649 4-205 (363)
204 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-35 2.4E-40 353.5 22.1 197 444-649 3-214 (402)
205 PRK14250 phosphate ABC transpo 100.0 1.6E-35 3.6E-40 333.4 22.3 193 444-649 3-207 (241)
206 cd03218 ABC_YhbG The ABC trans 100.0 6.9E-36 1.5E-40 334.8 19.2 196 445-649 1-208 (232)
207 PRK13652 cbiO cobalt transport 100.0 9.5E-36 2.1E-40 341.9 20.4 198 444-649 3-213 (277)
208 cd03295 ABC_OpuCA_Osmoprotecti 100.0 7.6E-36 1.6E-40 336.5 19.3 197 445-649 1-211 (242)
209 cd03257 ABC_NikE_OppD_transpor 100.0 1.3E-35 2.7E-40 331.8 20.7 197 445-649 2-221 (228)
210 COG1131 CcmA ABC-type multidru 100.0 6.9E-36 1.5E-40 343.5 19.0 198 444-649 4-212 (293)
211 TIGR01288 nodI ATP-binding ABC 100.0 9.1E-36 2E-40 346.3 19.8 197 444-649 4-210 (303)
212 TIGR03608 L_ocin_972_ABC putat 100.0 6.3E-36 1.4E-40 328.9 17.2 192 447-647 1-206 (206)
213 PRK13633 cobalt transporter AT 100.0 1.5E-35 3.3E-40 340.8 20.8 199 443-649 3-219 (280)
214 cd03251 ABCC_MsbA MsbA is an e 100.0 3.4E-35 7.4E-40 329.6 22.9 199 445-649 1-211 (234)
215 cd03244 ABCC_MRP_domain2 Domai 100.0 1.1E-35 2.3E-40 330.8 18.4 208 1098-1364 1-214 (221)
216 COG3839 MalK ABC-type sugar tr 100.0 5.7E-36 1.2E-40 341.6 16.5 201 1099-1362 3-209 (338)
217 PRK13641 cbiO cobalt transport 100.0 1.5E-35 3.2E-40 341.9 19.8 198 444-649 2-220 (287)
218 cd03224 ABC_TM1139_LivF_branch 100.0 1.8E-35 3.9E-40 329.2 19.8 194 445-649 1-207 (222)
219 COG1116 TauB ABC-type nitrate/ 100.0 8E-36 1.7E-40 321.5 16.3 201 1099-1365 3-209 (248)
220 cd03290 ABCC_SUR1_N The SUR do 100.0 5.7E-35 1.2E-39 324.1 23.7 197 446-649 2-216 (218)
221 PRK13638 cbiO cobalt transport 100.0 1.5E-35 3.3E-40 339.4 19.6 197 444-649 1-211 (271)
222 PRK11831 putative ABC transpor 100.0 1.7E-35 3.7E-40 338.5 19.9 198 443-649 6-219 (269)
223 TIGR01277 thiQ thiamine ABC tr 100.0 3E-35 6.5E-40 325.1 21.1 194 445-649 1-204 (213)
224 cd03248 ABCC_TAP TAP, the Tran 100.0 5.2E-35 1.1E-39 326.4 23.2 202 442-649 9-223 (226)
225 TIGR00972 3a0107s01c2 phosphat 100.0 2.2E-35 4.7E-40 333.8 20.3 197 444-649 1-218 (247)
226 PRK13649 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 341.0 19.5 197 445-649 3-220 (280)
227 PRK13639 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 339.1 20.0 197 445-649 2-212 (275)
228 PRK13640 cbiO cobalt transport 100.0 2E-35 4.3E-40 340.0 20.2 199 443-649 4-218 (282)
229 PRK13536 nodulation factor exp 100.0 1.9E-35 4.2E-40 346.4 20.2 198 443-649 40-247 (340)
230 PRK13548 hmuV hemin importer A 100.0 4.2E-35 9.2E-40 333.2 22.3 197 444-649 2-216 (258)
231 PRK13648 cbiO cobalt transport 100.0 2.4E-35 5.2E-40 337.4 20.1 199 443-649 6-217 (269)
232 PRK13645 cbiO cobalt transport 100.0 2E-35 4.4E-40 341.4 19.7 199 443-649 5-226 (289)
233 cd03288 ABCC_SUR2 The SUR doma 100.0 7.1E-35 1.5E-39 331.3 23.7 201 442-649 17-229 (257)
234 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 5E-35 1.1E-39 329.2 22.1 199 445-649 1-212 (238)
235 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.6E-35 3.5E-40 338.5 18.2 195 446-649 26-236 (269)
236 cd03288 ABCC_SUR2 The SUR doma 100.0 1.8E-35 3.9E-40 336.2 18.5 209 1096-1363 16-230 (257)
237 PRK09493 glnQ glutamine ABC tr 100.0 3.3E-35 7.2E-40 331.0 20.4 196 445-649 2-211 (240)
238 cd03254 ABCC_Glucan_exporter_l 100.0 1.4E-35 3.1E-40 331.6 17.3 209 1098-1364 1-214 (229)
239 cd03369 ABCC_NFT1 Domain 2 of 100.0 6.8E-35 1.5E-39 320.9 22.3 186 442-649 4-198 (207)
240 COG1120 FepC ABC-type cobalami 100.0 1E-35 2.2E-40 327.5 15.6 207 1099-1364 2-216 (258)
241 TIGR02982 heterocyst_DevA ABC 100.0 3.1E-35 6.8E-40 326.6 19.7 197 445-649 2-216 (220)
242 PRK10575 iron-hydroxamate tran 100.0 5.5E-35 1.2E-39 333.7 22.2 198 443-649 10-223 (265)
243 PRK13642 cbiO cobalt transport 100.0 3.4E-35 7.3E-40 337.3 20.5 198 444-649 4-215 (277)
244 cd03252 ABCC_Hemolysin The ABC 100.0 1.8E-35 4E-40 332.5 17.5 207 1100-1364 1-213 (237)
245 TIGR03411 urea_trans_UrtD urea 100.0 5.7E-35 1.2E-39 329.5 21.5 197 444-649 2-217 (242)
246 TIGR00960 3a0501s02 Type II (G 100.0 1.4E-35 3.1E-40 328.5 16.2 202 1100-1363 2-214 (216)
247 PRK11264 putative amino-acid A 100.0 3.2E-35 6.9E-40 333.2 19.3 197 444-649 3-219 (250)
248 PRK11124 artP arginine transpo 100.0 4.6E-35 1E-39 330.2 20.4 197 444-649 2-216 (242)
249 COG1124 DppF ABC-type dipeptid 100.0 2E-35 4.3E-40 315.0 16.2 199 1099-1361 3-216 (252)
250 PRK15079 oligopeptide ABC tran 100.0 3.4E-35 7.3E-40 343.5 19.7 199 443-649 7-237 (331)
251 PRK10771 thiQ thiamine transpo 100.0 9.7E-35 2.1E-39 325.4 22.6 194 445-649 2-205 (232)
252 cd03250 ABCC_MRP_domain1 Domai 100.0 4.2E-35 9.1E-40 321.8 19.0 194 1100-1363 1-203 (204)
253 PRK14242 phosphate transporter 100.0 4.8E-35 1E-39 332.3 20.0 198 443-649 5-223 (253)
254 PRK14273 phosphate ABC transpo 100.0 5.3E-35 1.2E-39 332.0 20.3 198 443-649 6-224 (254)
255 PRK10744 pstB phosphate transp 100.0 7.6E-35 1.7E-39 331.7 21.6 199 442-649 11-230 (260)
256 COG4555 NatA ABC-type Na+ tran 100.0 1E-35 2.3E-40 305.4 12.8 198 444-649 1-208 (245)
257 PRK10619 histidine/lysine/argi 100.0 6.2E-35 1.3E-39 332.0 20.6 198 443-649 4-227 (257)
258 TIGR03522 GldA_ABC_ATP gliding 100.0 4E-35 8.7E-40 340.4 19.3 197 444-649 2-207 (301)
259 PRK10070 glycine betaine trans 100.0 5.5E-35 1.2E-39 347.4 20.8 196 445-649 29-240 (400)
260 PRK11231 fecE iron-dicitrate t 100.0 9.9E-35 2.2E-39 329.9 22.0 197 444-649 2-213 (255)
261 TIGR03005 ectoine_ehuA ectoine 100.0 5.6E-35 1.2E-39 331.5 19.9 196 445-649 1-222 (252)
262 cd03253 ABCC_ATM1_transporter 100.0 3.1E-35 6.7E-40 330.4 17.5 207 1100-1364 1-212 (236)
263 TIGR02769 nickel_nikE nickel i 100.0 5.5E-35 1.2E-39 333.7 19.8 198 444-649 2-226 (265)
264 cd03245 ABCC_bacteriocin_expor 100.0 4E-35 8.7E-40 325.9 18.2 208 1098-1363 1-214 (220)
265 PRK14269 phosphate ABC transpo 100.0 7.2E-35 1.6E-39 329.3 20.5 201 444-649 2-216 (246)
266 cd03231 ABC_CcmA_heme_exporter 100.0 1E-34 2.2E-39 317.9 21.0 188 445-647 1-198 (201)
267 COG4525 TauB ABC-type taurine 100.0 2.8E-35 6.1E-40 299.8 15.3 205 444-656 3-215 (259)
268 COG4619 ABC-type uncharacteriz 100.0 1.7E-35 3.7E-40 294.5 13.0 185 456-649 14-209 (223)
269 PRK14268 phosphate ABC transpo 100.0 7.6E-35 1.7E-39 331.4 20.3 199 442-649 10-228 (258)
270 PRK14259 phosphate ABC transpo 100.0 1.6E-34 3.5E-39 330.3 22.7 198 442-649 11-228 (269)
271 PRK11300 livG leucine/isoleuci 100.0 1.1E-34 2.5E-39 329.7 21.3 197 444-649 5-229 (255)
272 PRK10895 lipopolysaccharide AB 100.0 1.1E-34 2.5E-39 326.8 20.7 197 444-649 3-212 (241)
273 PRK13538 cytochrome c biogenes 100.0 1.1E-34 2.4E-39 318.3 20.0 191 445-647 2-202 (204)
274 TIGR02314 ABC_MetN D-methionin 100.0 3.7E-35 8.1E-40 343.3 17.3 203 1100-1364 2-218 (343)
275 PRK14235 phosphate transporter 100.0 1.3E-34 2.9E-39 330.8 21.2 199 442-649 17-237 (267)
276 TIGR03410 urea_trans_UrtE urea 100.0 9.9E-35 2.2E-39 325.0 19.5 193 445-649 1-207 (230)
277 cd03223 ABCD_peroxisomal_ALDP 100.0 6.8E-35 1.5E-39 309.1 17.1 166 1100-1367 1-166 (166)
278 PRK10253 iron-enterobactin tra 100.0 1.7E-34 3.7E-39 329.7 21.4 198 443-649 6-219 (265)
279 TIGR03873 F420-0_ABC_ATP propo 100.0 1.7E-34 3.8E-39 328.1 21.1 196 445-649 2-212 (256)
280 cd03248 ABCC_TAP TAP, the Tran 100.0 7.3E-35 1.6E-39 325.2 17.7 210 1096-1363 8-224 (226)
281 TIGR00968 3a0106s01 sulfate AB 100.0 1.4E-34 3E-39 325.0 20.0 196 445-649 1-206 (237)
282 PRK14247 phosphate ABC transpo 100.0 1.4E-34 3E-39 327.9 20.2 197 444-649 3-220 (250)
283 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.4E-35 9.4E-40 325.2 15.7 202 1100-1363 1-216 (218)
284 cd03226 ABC_cobalt_CbiO_domain 100.0 3.4E-35 7.4E-40 322.8 14.6 196 1101-1363 1-202 (205)
285 PRK11614 livF leucine/isoleuci 100.0 1.8E-34 3.9E-39 324.4 20.7 195 444-649 5-212 (237)
286 PRK11308 dppF dipeptide transp 100.0 1.4E-34 3.1E-39 338.0 20.7 199 443-649 4-230 (327)
287 PRK13540 cytochrome c biogenes 100.0 1.8E-34 3.9E-39 315.7 19.9 187 445-645 2-197 (200)
288 TIGR01188 drrA daunorubicin re 100.0 6.5E-35 1.4E-39 339.0 17.4 185 457-649 5-199 (302)
289 cd03246 ABCC_Protease_Secretio 100.0 1.8E-34 3.9E-39 308.2 19.4 160 445-649 1-170 (173)
290 cd03247 ABCC_cytochrome_bd The 100.0 1.9E-34 4E-39 309.6 19.3 163 445-649 1-171 (178)
291 TIGR03740 galliderm_ABC gallid 100.0 2.3E-34 4.9E-39 320.5 20.7 192 445-649 1-199 (223)
292 TIGR03415 ABC_choXWV_ATP choli 100.0 1.5E-34 3.2E-39 341.2 20.3 186 456-649 35-240 (382)
293 cd03290 ABCC_SUR1_N The SUR do 100.0 1.4E-34 3.1E-39 320.9 18.9 204 1101-1363 2-217 (218)
294 cd03234 ABCG_White The White s 100.0 1.7E-34 3.8E-39 322.1 19.6 198 444-649 3-219 (226)
295 PRK13543 cytochrome c biogenes 100.0 2.5E-34 5.4E-39 317.9 20.5 195 443-649 10-212 (214)
296 cd03300 ABC_PotA_N PotA is an 100.0 1.5E-34 3.2E-39 323.8 18.9 196 445-649 1-206 (232)
297 cd03292 ABC_FtsE_transporter F 100.0 8.4E-35 1.8E-39 321.9 16.6 202 1100-1363 1-212 (214)
298 TIGR01166 cbiO cobalt transpor 100.0 7E-35 1.5E-39 316.4 15.6 175 455-637 2-189 (190)
299 cd03259 ABC_Carb_Solutes_like 100.0 1.1E-34 2.4E-39 320.8 17.0 201 1100-1363 1-207 (213)
300 PRK14251 phosphate ABC transpo 100.0 2.6E-34 5.6E-39 325.9 20.4 197 444-649 4-221 (251)
301 PRK15112 antimicrobial peptide 100.0 2.4E-34 5.2E-39 328.7 19.9 199 443-649 3-225 (267)
302 PRK15056 manganese/iron transp 100.0 4.9E-34 1.1E-38 327.0 22.6 197 444-648 6-216 (272)
303 TIGR02673 FtsE cell division A 100.0 1.2E-34 2.6E-39 320.7 16.9 202 1100-1363 2-213 (214)
304 PRK09544 znuC high-affinity zi 100.0 6.7E-34 1.4E-38 321.4 23.3 185 444-649 4-196 (251)
305 PRK14237 phosphate transporter 100.0 3.4E-34 7.3E-39 327.4 21.1 199 442-649 18-237 (267)
306 PRK14248 phosphate ABC transpo 100.0 3.7E-34 8.1E-39 327.5 21.3 198 443-649 20-238 (268)
307 PRK13631 cbiO cobalt transport 100.0 1.5E-34 3.2E-39 336.9 18.2 202 1098-1364 20-253 (320)
308 TIGR01978 sufC FeS assembly AT 100.0 2.2E-34 4.7E-39 325.0 18.9 197 445-649 1-220 (243)
309 PRK13539 cytochrome c biogenes 100.0 4.1E-34 8.9E-39 314.5 20.5 191 444-648 2-199 (207)
310 PRK14267 phosphate ABC transpo 100.0 3E-34 6.6E-39 325.7 19.9 197 444-649 4-223 (253)
311 PRK14245 phosphate ABC transpo 100.0 4.1E-34 8.8E-39 324.0 20.6 197 444-649 3-220 (250)
312 PRK14270 phosphate ABC transpo 100.0 4.6E-34 9.9E-39 323.8 20.8 198 443-649 3-221 (251)
313 PRK09984 phosphonate/organopho 100.0 6.1E-34 1.3E-38 324.8 21.9 197 444-649 4-228 (262)
314 PRK14239 phosphate transporter 100.0 5.3E-34 1.1E-38 323.6 21.2 197 444-649 5-222 (252)
315 cd03251 ABCC_MsbA MsbA is an e 100.0 2E-34 4.4E-39 323.4 17.5 207 1100-1364 1-213 (234)
316 cd03291 ABCC_CFTR1 The CFTR su 100.0 3.1E-33 6.6E-38 319.9 27.4 191 442-649 37-233 (282)
317 PRK14249 phosphate ABC transpo 100.0 7.1E-34 1.5E-38 322.3 22.0 198 443-649 3-221 (251)
318 COG1125 OpuBA ABC-type proline 100.0 8.5E-35 1.8E-39 308.6 13.3 198 1100-1363 2-212 (309)
319 TIGR02324 CP_lyasePhnL phospho 100.0 5.2E-34 1.1E-38 317.9 20.4 196 445-648 2-223 (224)
320 PRK14254 phosphate ABC transpo 100.0 8.3E-34 1.8E-38 326.6 22.8 198 442-649 37-255 (285)
321 PRK14256 phosphate ABC transpo 100.0 5.6E-34 1.2E-38 323.3 21.1 202 443-649 3-222 (252)
322 PRK14274 phosphate ABC transpo 100.0 4.8E-34 1E-38 325.1 20.6 198 443-649 11-229 (259)
323 cd03261 ABC_Org_Solvent_Resist 100.0 1.7E-34 3.6E-39 324.2 16.4 203 1100-1364 1-214 (235)
324 PRK14241 phosphate transporter 100.0 5.8E-34 1.3E-38 324.2 20.9 196 444-648 4-221 (258)
325 PRK11650 ugpC glycerol-3-phosp 100.0 1.9E-34 4.1E-39 340.2 17.5 204 1099-1364 3-212 (356)
326 PRK14240 phosphate transporter 100.0 6.2E-34 1.3E-38 322.6 20.9 197 444-649 3-220 (250)
327 PRK11629 lolD lipoprotein tran 100.0 2.5E-34 5.4E-39 322.3 17.5 203 1099-1363 5-221 (233)
328 cd03299 ABC_ModC_like Archeal 100.0 4.6E-34 9.9E-39 320.4 19.6 195 445-649 1-205 (235)
329 PRK11022 dppD dipeptide transp 100.0 4.2E-34 9.1E-39 334.3 19.9 198 444-649 3-229 (326)
330 TIGR02315 ABC_phnC phosphonate 100.0 2.3E-34 5.1E-39 324.8 17.2 211 1100-1364 2-223 (243)
331 COG4175 ProV ABC-type proline/ 100.0 2.2E-34 4.8E-39 313.5 16.1 182 460-649 43-240 (386)
332 COG3638 ABC-type phosphate/pho 100.0 1.8E-34 4E-39 304.8 15.0 212 1099-1364 3-225 (258)
333 COG3842 PotA ABC-type spermidi 100.0 1.3E-34 2.8E-39 332.3 15.0 200 1098-1363 4-213 (352)
334 PRK14244 phosphate ABC transpo 100.0 5.7E-34 1.2E-38 323.1 20.2 196 445-649 6-223 (251)
335 PRK13547 hmuV hemin importer A 100.0 7.5E-34 1.6E-38 324.3 21.2 196 445-649 2-230 (272)
336 cd03266 ABC_NatA_sodium_export 100.0 2.7E-34 5.9E-39 318.8 17.0 203 1100-1364 2-213 (218)
337 COG1122 CbiO ABC-type cobalt t 100.0 3.1E-34 6.7E-39 316.4 17.2 201 1099-1364 3-216 (235)
338 TIGR01189 ccmA heme ABC export 100.0 5E-34 1.1E-38 311.8 18.8 187 445-645 1-196 (198)
339 PRK14238 phosphate transporter 100.0 6.2E-34 1.3E-38 325.9 20.3 199 442-649 22-241 (271)
340 cd03268 ABC_BcrA_bacitracin_re 100.0 2E-34 4.4E-39 317.4 15.7 197 1100-1363 1-202 (208)
341 PRK13647 cbiO cobalt transport 100.0 2.6E-34 5.6E-39 329.3 17.1 204 1099-1364 4-215 (274)
342 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.7E-34 5.9E-39 323.2 17.0 207 1100-1364 1-214 (238)
343 PRK11144 modC molybdate transp 100.0 8.1E-34 1.8E-38 335.6 21.6 187 445-649 2-204 (352)
344 TIGR02211 LolD_lipo_ex lipopro 100.0 3.7E-34 8E-39 318.4 17.6 202 1100-1363 2-217 (221)
345 cd03230 ABC_DR_subfamily_A Thi 100.0 1.1E-33 2.4E-38 302.1 20.3 160 445-649 1-170 (173)
346 PRK11701 phnK phosphonate C-P 100.0 9.8E-34 2.1E-38 322.3 21.2 198 443-649 5-227 (258)
347 cd03296 ABC_CysA_sulfate_impor 100.0 4.2E-34 9.2E-39 321.7 17.9 205 1100-1363 3-213 (239)
348 cd03297 ABC_ModC_molybdenum_tr 100.0 6.7E-34 1.5E-38 314.7 19.1 187 449-649 5-207 (214)
349 cd03369 ABCC_NFT1 Domain 2 of 100.0 4.5E-34 9.8E-39 314.4 17.6 194 1091-1363 1-199 (207)
350 cd03263 ABC_subfamily_A The AB 100.0 3.1E-34 6.7E-39 318.8 16.4 203 1100-1364 1-209 (220)
351 PRK13637 cbiO cobalt transport 100.0 4.3E-34 9.2E-39 329.5 17.6 200 1100-1364 3-222 (287)
352 PRK14275 phosphate ABC transpo 100.0 9.9E-34 2.2E-38 326.3 20.5 199 442-649 37-256 (286)
353 cd03301 ABC_MalK_N The N-termi 100.0 4.6E-34 9.9E-39 315.8 17.0 201 1100-1363 1-207 (213)
354 PRK13650 cbiO cobalt transport 100.0 4.4E-34 9.5E-39 328.3 17.2 201 1099-1364 4-217 (279)
355 PRK14253 phosphate ABC transpo 100.0 1.1E-33 2.5E-38 320.3 20.4 197 444-649 3-219 (249)
356 cd03256 ABC_PhnC_transporter A 100.0 4E-34 8.6E-39 322.5 16.6 211 1100-1364 1-222 (241)
357 PRK11432 fbpC ferric transport 100.0 4.1E-34 8.9E-39 336.3 17.3 202 1097-1364 4-214 (351)
358 PRK14255 phosphate ABC transpo 100.0 1.2E-33 2.5E-38 320.7 20.4 198 443-649 4-222 (252)
359 TIGR02142 modC_ABC molybdenum 100.0 1.1E-33 2.4E-38 334.9 21.0 188 449-649 4-207 (354)
360 cd03293 ABC_NrtD_SsuB_transpor 100.0 6E-34 1.3E-38 316.4 17.5 202 1100-1366 1-211 (220)
361 PRK14262 phosphate ABC transpo 100.0 1.4E-33 3.1E-38 319.7 20.7 197 444-649 3-220 (250)
362 PRK14243 phosphate transporter 100.0 2.1E-33 4.5E-38 320.4 22.1 200 443-648 9-224 (264)
363 cd03235 ABC_Metallic_Cations A 100.0 3.8E-34 8.2E-39 316.5 15.4 200 1101-1362 1-207 (213)
364 PRK14260 phosphate ABC transpo 100.0 1.4E-33 2.9E-38 321.3 20.4 202 443-649 6-224 (259)
365 PRK14236 phosphate transporter 100.0 1.7E-33 3.7E-38 322.6 21.3 199 442-649 23-242 (272)
366 COG1123 ATPase components of v 100.0 1.4E-33 3.1E-38 335.7 21.4 200 442-649 278-505 (539)
367 PRK14250 phosphate ABC transpo 100.0 5.4E-34 1.2E-38 321.1 16.9 198 1099-1363 3-208 (241)
368 PRK14265 phosphate ABC transpo 100.0 2.9E-33 6.2E-38 320.7 23.1 202 441-648 17-234 (274)
369 cd03228 ABCC_MRP_Like The MRP 100.0 1.4E-33 3E-38 300.9 19.1 160 445-649 1-169 (171)
370 cd03225 ABC_cobalt_CbiO_domain 100.0 4.5E-34 9.8E-39 315.4 15.8 201 1101-1363 1-210 (211)
371 PRK10419 nikE nickel transport 100.0 1.2E-33 2.6E-38 323.0 19.7 198 444-649 3-227 (268)
372 PRK10908 cell division protein 100.0 7.3E-34 1.6E-38 316.2 17.4 199 1100-1363 2-213 (222)
373 COG4559 ABC-type hemin transpo 100.0 1.1E-33 2.4E-38 292.6 17.4 197 444-649 1-216 (259)
374 cd03229 ABC_Class3 This class 100.0 1.7E-33 3.7E-38 302.2 19.6 162 445-649 1-176 (178)
375 PRK12369 putative transporter; 100.0 2.4E-31 5.3E-36 307.2 38.8 283 109-419 21-321 (326)
376 cd03264 ABC_drug_resistance_li 100.0 6.4E-34 1.4E-38 314.2 16.7 200 1100-1363 1-205 (211)
377 PRK15093 antimicrobial peptide 100.0 1.2E-33 2.6E-38 331.5 20.0 198 444-649 3-234 (330)
378 PRK14261 phosphate ABC transpo 100.0 1.9E-33 4.2E-38 319.1 21.0 202 443-649 5-223 (253)
379 cd03219 ABC_Mj1267_LivG_branch 100.0 4.2E-34 9E-39 321.3 14.9 211 1100-1363 1-219 (236)
380 cd03262 ABC_HisP_GlnQ_permease 100.0 9.2E-34 2E-38 313.4 17.0 202 1100-1363 1-211 (213)
381 cd03260 ABC_PstB_phosphate_tra 100.0 4.4E-34 9.5E-39 319.1 14.4 205 1100-1364 1-217 (227)
382 PRK14271 phosphate ABC transpo 100.0 2.2E-33 4.8E-38 321.8 20.5 198 443-649 20-237 (276)
383 TIGR01184 ntrCD nitrate transp 100.0 1.3E-33 2.8E-38 315.7 18.0 181 461-649 1-190 (230)
384 cd03267 ABC_NatA_like Similar 100.0 1.2E-33 2.5E-38 317.2 17.7 185 457-649 33-229 (236)
385 PRK13541 cytochrome c biogenes 100.0 2.4E-33 5.2E-38 305.6 19.6 186 445-645 2-193 (195)
386 PRK14252 phosphate ABC transpo 100.0 4.8E-33 1.1E-37 317.8 22.8 199 442-649 14-235 (265)
387 PRK14258 phosphate ABC transpo 100.0 2.5E-33 5.4E-38 319.4 20.3 202 443-649 6-226 (261)
388 TIGR02323 CP_lyasePhnK phospho 100.0 3.1E-33 6.7E-38 317.5 20.9 197 444-649 3-224 (253)
389 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.3E-33 2.8E-38 311.7 17.2 199 1100-1363 1-205 (211)
390 PRK09473 oppD oligopeptide tra 100.0 1.6E-33 3.5E-38 329.5 19.0 199 443-649 11-237 (330)
391 PRK10418 nikD nickel transport 100.0 3.8E-33 8.2E-38 316.7 21.3 194 444-649 4-216 (254)
392 cd03269 ABC_putative_ATPase Th 100.0 1.3E-33 2.9E-38 311.4 17.0 199 1100-1363 1-204 (210)
393 TIGR03265 PhnT2 putative 2-ami 100.0 1.1E-33 2.3E-38 333.5 17.0 203 1099-1364 4-212 (353)
394 PRK13636 cbiO cobalt transport 100.0 1.1E-33 2.4E-38 325.7 16.7 201 1099-1364 5-219 (283)
395 PRK14263 phosphate ABC transpo 100.0 5.1E-33 1.1E-37 316.4 22.0 200 443-648 7-222 (261)
396 PRK14246 phosphate ABC transpo 100.0 3.2E-33 6.9E-38 317.3 20.1 199 442-649 8-227 (257)
397 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.6E-33 3.4E-38 316.5 17.4 202 1100-1364 2-209 (236)
398 COG0410 LivF ABC-type branched 100.0 5.4E-33 1.2E-37 294.6 20.3 196 444-649 3-212 (237)
399 PRK13646 cbiO cobalt transport 100.0 9.9E-34 2.2E-38 326.5 16.1 201 1100-1365 3-224 (286)
400 PRK13632 cbiO cobalt transport 100.0 1.6E-33 3.5E-38 322.5 17.5 201 1099-1364 7-219 (271)
401 KOG0065 Pleiotropic drug resis 100.0 4E-31 8.6E-36 333.6 40.4 189 458-649 128-337 (1391)
402 PRK10851 sulfate/thiosulfate t 100.0 1.8E-33 3.8E-38 331.6 18.1 207 1099-1364 2-214 (353)
403 PRK14272 phosphate ABC transpo 100.0 3.5E-33 7.5E-38 316.9 19.9 201 444-649 4-222 (252)
404 cd03258 ABC_MetN_methionine_tr 100.0 1.5E-33 3.1E-38 316.2 16.6 203 1100-1364 2-218 (233)
405 PRK11153 metN DL-methionine tr 100.0 1.4E-33 3E-38 332.5 17.0 202 1100-1363 2-217 (343)
406 PRK11247 ssuB aliphatic sulfon 100.0 1.6E-33 3.5E-38 318.9 16.9 194 1098-1363 11-210 (257)
407 cd03232 ABC_PDR_domain2 The pl 100.0 3.8E-33 8.2E-38 303.1 19.1 172 444-652 3-187 (192)
408 cd03218 ABC_YhbG The ABC trans 100.0 9.3E-34 2E-38 317.6 14.4 202 1100-1364 1-210 (232)
409 cd03224 ABC_TM1139_LivF_branch 100.0 1E-33 2.3E-38 315.0 14.7 200 1100-1364 1-209 (222)
410 PRK14269 phosphate ABC transpo 100.0 2.1E-33 4.6E-38 317.3 17.0 209 1099-1364 2-218 (246)
411 PRK11248 tauB taurine transpor 100.0 3.7E-33 7.9E-38 316.5 18.9 202 1100-1367 2-209 (255)
412 COG0444 DppD ABC-type dipeptid 100.0 4.4E-33 9.5E-38 310.3 19.0 204 445-658 2-236 (316)
413 PRK13643 cbiO cobalt transport 100.0 1.9E-33 4.1E-38 324.3 16.7 200 1100-1364 2-221 (288)
414 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.1E-33 4.6E-38 316.6 16.7 203 1100-1364 1-213 (242)
415 cd03265 ABC_DrrA DrrA is the A 100.0 2.5E-33 5.4E-38 311.5 17.0 202 1100-1364 1-209 (220)
416 PRK14266 phosphate ABC transpo 100.0 7.5E-33 1.6E-37 313.8 21.0 201 444-649 3-220 (250)
417 cd03213 ABCG_EPDR ABCG transpo 100.0 4.4E-33 9.4E-38 303.0 18.3 169 444-649 3-187 (194)
418 COG1137 YhbG ABC-type (unclass 100.0 5.1E-34 1.1E-38 292.6 10.3 197 444-649 4-214 (243)
419 PRK10584 putative ABC transpor 100.0 3.4E-33 7.4E-38 312.2 18.0 203 1099-1363 6-222 (228)
420 TIGR03258 PhnT 2-aminoethylpho 100.0 1.7E-33 3.6E-38 332.2 16.2 203 1098-1363 4-215 (362)
421 cd03215 ABC_Carb_Monos_II This 100.0 5.3E-33 1.2E-37 299.4 18.6 161 444-649 4-179 (182)
422 PRK11000 maltose/maltodextrin 100.0 2.6E-33 5.6E-38 332.8 17.7 203 1099-1364 3-211 (369)
423 PRK13635 cbiO cobalt transport 100.0 2.8E-33 6.1E-38 321.4 17.3 200 1099-1363 5-216 (279)
424 PRK09452 potA putrescine/sperm 100.0 2.5E-33 5.5E-38 331.7 17.3 201 1098-1364 13-222 (375)
425 cd03257 ABC_NikE_OppD_transpor 100.0 4.2E-33 9E-38 311.5 18.1 203 1100-1363 2-222 (228)
426 PRK13634 cbiO cobalt transport 100.0 2E-33 4.3E-38 324.4 16.0 200 1100-1364 3-223 (290)
427 PRK13644 cbiO cobalt transport 100.0 3.1E-33 6.7E-38 320.4 17.2 203 1100-1364 2-212 (274)
428 cd03231 ABC_CcmA_heme_exporter 100.0 3.6E-33 7.9E-38 305.6 17.0 192 1100-1360 1-198 (201)
429 TIGR03005 ectoine_ehuA ectoine 100.0 3E-33 6.5E-38 317.3 16.7 203 1100-1364 1-224 (252)
430 COG1127 Ttg2A ABC-type transpo 100.0 3.3E-33 7.1E-38 296.1 15.6 205 1098-1367 7-226 (263)
431 PRK11607 potG putrescine trans 100.0 3.9E-33 8.4E-38 330.8 18.0 203 1098-1363 18-226 (377)
432 PRK09536 btuD corrinoid ABC tr 100.0 3.3E-33 7.1E-38 332.4 17.4 207 1099-1364 3-216 (402)
433 PRK13652 cbiO cobalt transport 100.0 4.2E-33 9.2E-38 320.0 17.5 200 1100-1364 4-215 (277)
434 cd03247 ABCC_cytochrome_bd The 100.0 1.8E-33 3.9E-38 302.1 13.4 168 1100-1363 1-172 (178)
435 PRK14264 phosphate ABC transpo 100.0 1.6E-32 3.4E-37 319.1 22.4 199 442-649 43-275 (305)
436 COG3840 ThiQ ABC-type thiamine 100.0 3.2E-33 7E-38 282.3 14.3 203 1100-1367 2-210 (231)
437 CHL00131 ycf16 sulfate ABC tra 100.0 1.8E-32 3.9E-37 311.1 22.2 199 443-649 6-227 (252)
438 TIGR03411 urea_trans_UrtD urea 100.0 4.4E-33 9.6E-38 314.1 17.1 210 1100-1364 3-219 (242)
439 TIGR02982 heterocyst_DevA ABC 100.0 2.7E-33 5.9E-38 311.1 15.0 203 1100-1363 2-217 (220)
440 cd03237 ABC_RNaseL_inhibitor_d 100.0 1.1E-32 2.4E-37 310.1 20.1 182 453-652 2-194 (246)
441 TIGR00972 3a0107s01c2 phosphat 100.0 4.5E-33 9.8E-38 314.9 16.9 207 1100-1364 2-220 (247)
442 PRK13651 cobalt transporter AT 100.0 4.1E-33 8.8E-38 323.0 16.8 200 1100-1364 3-242 (305)
443 TIGR01277 thiQ thiamine ABC tr 100.0 4.2E-33 9.1E-38 308.0 16.1 198 1101-1363 2-205 (213)
444 cd03233 ABC_PDR_domain1 The pl 100.0 1.2E-32 2.6E-37 301.5 19.6 175 444-649 3-195 (202)
445 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 7.6E-33 1.6E-37 308.1 18.2 190 445-649 23-217 (224)
446 PRK10619 histidine/lysine/argi 100.0 5.5E-33 1.2E-37 316.0 17.4 208 1097-1365 3-230 (257)
447 COG0411 LivG ABC-type branched 100.0 3.9E-33 8.4E-38 297.9 15.1 197 444-649 4-225 (250)
448 PRK11264 putative amino-acid A 100.0 5.7E-33 1.2E-37 314.8 17.2 204 1099-1364 3-221 (250)
449 cd03246 ABCC_Protease_Secretio 100.0 3.9E-33 8.5E-38 297.9 15.0 165 1100-1363 1-171 (173)
450 PRK10744 pstB phosphate transp 100.0 7.1E-33 1.5E-37 315.6 18.1 210 1097-1364 11-232 (260)
451 PRK13649 cbiO cobalt transport 100.0 4.3E-33 9.3E-38 320.8 16.4 200 1100-1364 3-222 (280)
452 PRK11124 artP arginine transpo 100.0 5.4E-33 1.2E-37 313.4 16.8 203 1100-1364 3-218 (242)
453 PRK10247 putative ABC transpor 100.0 4.6E-33 9.9E-38 310.2 16.0 199 1098-1361 6-211 (225)
454 cd03214 ABC_Iron-Siderophores_ 100.0 5.6E-33 1.2E-37 298.7 16.1 162 446-649 1-173 (180)
455 TIGR00968 3a0106s01 sulfate AB 100.0 6.4E-33 1.4E-37 311.5 17.2 202 1100-1364 1-208 (237)
456 PRK13633 cobalt transporter AT 100.0 5.8E-33 1.3E-37 319.4 17.2 204 1099-1364 4-221 (280)
457 PRK13645 cbiO cobalt transport 100.0 5.6E-33 1.2E-37 321.1 17.1 205 1097-1363 4-227 (289)
458 PRK14273 phosphate ABC transpo 100.0 5.9E-33 1.3E-37 315.3 17.0 209 1098-1364 6-226 (254)
459 TIGR03608 L_ocin_972_ABC putat 100.0 4.3E-33 9.4E-38 306.4 15.2 195 1102-1359 1-205 (206)
460 TIGR01288 nodI ATP-binding ABC 100.0 8.5E-33 1.8E-37 321.4 18.1 199 1099-1363 4-211 (303)
461 COG4615 PvdE ABC-type sideroph 100.0 1.7E-29 3.6E-34 281.1 43.1 237 391-649 277-523 (546)
462 cd03300 ABC_PotA_N PotA is an 100.0 5.5E-33 1.2E-37 311.1 15.7 202 1100-1364 1-208 (232)
463 TIGR03410 urea_trans_UrtE urea 100.0 3.3E-33 7.3E-38 312.7 13.9 199 1100-1364 1-209 (230)
464 PRK13538 cytochrome c biogenes 100.0 7.1E-33 1.5E-37 304.1 16.0 195 1100-1360 2-202 (204)
465 PRK09493 glnQ glutamine ABC tr 100.0 7.9E-33 1.7E-37 311.6 16.7 203 1100-1364 2-213 (240)
466 PRK10575 iron-hydroxamate tran 100.0 8.2E-33 1.8E-37 315.8 17.0 207 1099-1364 11-225 (265)
467 PRK13642 cbiO cobalt transport 100.0 6.1E-33 1.3E-37 318.7 16.0 201 1099-1364 4-217 (277)
468 PRK14242 phosphate transporter 100.0 6.8E-33 1.5E-37 314.7 16.1 208 1099-1364 6-225 (253)
469 PRK10261 glutathione transport 100.0 1.6E-32 3.4E-37 348.2 21.2 199 443-649 312-539 (623)
470 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.6E-33 1.2E-37 317.6 15.4 201 1101-1364 26-238 (269)
471 PRK13537 nodulation ABC transp 100.0 1.1E-32 2.4E-37 320.0 18.0 203 1098-1363 6-214 (306)
472 COG4619 ABC-type uncharacteriz 100.0 1.7E-33 3.6E-38 280.4 9.3 191 1111-1364 14-211 (223)
473 TIGR02770 nickel_nikD nickel i 100.0 1.2E-32 2.5E-37 308.1 17.3 182 460-649 1-201 (230)
474 PRK10771 thiQ thiamine transpo 100.0 1.5E-32 3.4E-37 307.6 18.2 199 1100-1363 2-206 (232)
475 PRK14235 phosphate transporter 100.0 8.4E-33 1.8E-37 316.0 16.3 211 1097-1364 17-239 (267)
476 PRK11300 livG leucine/isoleuci 100.0 9.4E-33 2E-37 314.0 16.6 217 1099-1364 5-231 (255)
477 PRK11831 putative ABC transpor 100.0 1.1E-32 2.3E-37 315.4 17.1 204 1099-1364 7-221 (269)
478 PRK09580 sufC cysteine desulfu 100.0 4.2E-32 9.1E-37 307.4 21.5 197 445-649 2-221 (248)
479 PRK11231 fecE iron-dicitrate t 100.0 1.1E-32 2.3E-37 313.3 16.8 206 1100-1364 3-215 (255)
480 PRK11614 livF leucine/isoleuci 100.0 8.3E-33 1.8E-37 310.9 15.6 200 1099-1364 5-214 (237)
481 PRK14247 phosphate ABC transpo 100.0 1.3E-32 2.8E-37 311.9 17.2 209 1099-1364 3-222 (250)
482 TIGR01186 proV glycine betaine 100.0 5.2E-33 1.1E-37 326.9 14.5 190 1112-1363 5-206 (363)
483 cd03230 ABC_DR_subfamily_A Thi 100.0 1.2E-32 2.5E-37 294.3 15.5 166 1100-1364 1-172 (173)
484 PRK13641 cbiO cobalt transport 100.0 1.4E-32 3E-37 317.2 17.3 201 1099-1364 2-222 (287)
485 PRK10895 lipopolysaccharide AB 100.0 8.6E-33 1.9E-37 311.5 15.2 203 1100-1364 4-214 (241)
486 cd03291 ABCC_CFTR1 The CFTR su 100.0 4.6E-32 9.9E-37 310.3 21.1 195 1097-1364 37-235 (282)
487 PRK13639 cbiO cobalt transport 100.0 1.3E-32 2.8E-37 315.6 16.6 203 1100-1364 2-214 (275)
488 cd03234 ABCG_White The White s 100.0 8.2E-33 1.8E-37 308.6 14.6 203 1100-1363 4-220 (226)
489 PRK13640 cbiO cobalt transport 100.0 1.2E-32 2.5E-37 317.0 16.3 206 1097-1364 3-220 (282)
490 PRK13638 cbiO cobalt transport 100.0 1.6E-32 3.5E-37 314.4 17.2 202 1100-1364 2-213 (271)
491 PRK15079 oligopeptide ABC tran 100.0 1.3E-32 2.9E-37 321.7 16.7 206 1098-1363 7-238 (331)
492 PRK03695 vitamin B12-transport 100.0 3E-32 6.4E-37 308.1 18.9 189 446-649 2-208 (248)
493 PRK13540 cytochrome c biogenes 100.0 1.6E-32 3.5E-37 300.3 16.1 190 1100-1357 2-196 (200)
494 TIGR02769 nickel_nikE nickel i 100.0 8.8E-33 1.9E-37 315.6 14.7 203 1100-1363 3-227 (265)
495 cd03217 ABC_FeS_Assembly ABC-t 100.0 4.1E-32 8.8E-37 297.0 19.1 165 445-649 1-180 (200)
496 PRK13539 cytochrome c biogenes 100.0 1.9E-32 4.2E-37 301.3 16.2 192 1100-1360 3-198 (207)
497 PRK14267 phosphate ABC transpo 100.0 1.7E-32 3.7E-37 311.4 16.3 209 1099-1364 4-225 (253)
498 TIGR03873 F420-0_ABC_ATP propo 100.0 2E-32 4.4E-37 311.2 16.9 206 1100-1364 2-214 (256)
499 TIGR03269 met_CoM_red_A2 methy 100.0 3.6E-32 7.8E-37 339.8 20.6 198 443-649 278-503 (520)
500 PRK13648 cbiO cobalt transport 100.0 2.4E-32 5.3E-37 312.6 17.4 203 1099-1363 7-218 (269)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-131 Score=1240.93 Aligned_cols=1133 Identities=19% Similarity=0.229 Sum_probs=750.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 102 MGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTK 181 (1374)
Q Consensus 102 ~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~ 181 (1374)
.+..++.+.++..++.-.....+..+.|++.+++.........+.+..+.+..+...+......|++-..-..-=++.+.
T Consensus 25 ~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~ 104 (1228)
T KOG0055|consen 25 FDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTA 104 (1228)
T ss_pred hhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555556667777788888877655322222333332222222222222334443333333446888
Q ss_pred HHHHHHhhccccccccccCCCC-CChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 000647 182 LIHTRYFENMAYYKISHVDGRI-THPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLG 260 (1374)
Q Consensus 182 ~l~~~yl~~~~~y~~~~~d~~~-~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~ 260 (1374)
++|.+|++..+.+++.|+|... ++..+|+++|++++.+.+.+.+..++..+.+ ++-++.+.++..|.++++++.+.++
T Consensus 105 riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~-fi~g~ii~F~~~W~Ltlv~l~~~Pl 183 (1228)
T KOG0055|consen 105 RIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLAT-FIAGFVIGFYYGWKLTLVMLSFIPL 183 (1228)
T ss_pred HHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998754 6999999999999999999988765554432 3334445556677888888777777
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000647 261 AGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV-VLHDHWWFGMIQD 339 (1374)
Q Consensus 261 ~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~-~~~~~~~~~~~~~ 339 (1374)
.......+++.+.+.+.+++...++.-...++...++.+|.+|+||+.|.+ +|.+..+..++ .+++.++.++...
T Consensus 184 i~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~----ry~~~L~~~~k~gi~~g~~~G~~~G 259 (1228)
T KOG0055|consen 184 IAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIE----RYSKALENALKFGIKKGLFKGLGLG 259 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 666666677888889989998888877777777778888999999999985 55555444433 3455555555433
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccCC-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000647 340 FLLKYLGATVAVILIIEPFFAGNLKPD-TSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMV 418 (1374)
Q Consensus 340 ~~~~~~~~~~~~il~~~~~~~g~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~ 418 (1374)
+...++....+..+ |+++.+... ..+.|.. +. .+.++++. -.+++...+....+.....++.+++++++
T Consensus 260 ~~~~~~~~~~a~~~----WyG~~li~~~~~~~g~v--~~---v~~~vl~g-~~sLgqa~p~l~~f~~a~~aa~~I~~~i~ 329 (1228)
T KOG0055|consen 260 FTFFLLFASYALAF----WYGSTLILNGGYNGGDV--IT---VFFSVLIG-GMSLGQASPHLSAFAKARAAAYRIFETID 329 (1228)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHhcCCCCCceE--EE---EEeehhhh-hhhhhccccchHHHhccccchHHHHHHhc
Confidence 32111111122211 233222111 1122211 00 01112222 24677888888889999999999999998
Q ss_pred hcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCC--eeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc
Q 000647 419 ISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGN--VLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP 496 (1374)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~--~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~ 496 (1374)
..+..+..+ . .........+.|+|+||.|.||..+ ++|+++||+|++|+.++|||||||||||++++|.|+|+
T Consensus 330 ~~~~i~~~~-~----~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfyd 404 (1228)
T KOG0055|consen 330 RKPSIDPYS-K----GGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYD 404 (1228)
T ss_pred CCCCCCccc-c----cCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcC
Confidence 877654321 0 0111112357899999999999754 79999999999999999999999999999999999999
Q ss_pred CCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCC
Q 000647 497 LVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPE 570 (1374)
Q Consensus 497 ~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~ 570 (1374)
|++|+|.+||.+ +++|++||.|.|+|.+|++||+|||.||.++ .+.+++.++++.++.++++..+|.+
T Consensus 405 P~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~d------at~~~i~~a~k~ana~~fi~~lp~g 478 (1228)
T KOG0055|consen 405 PTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPD------ATREEIEEAAKAANAHDFILKLPDG 478 (1228)
T ss_pred CCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCc------ccHHHHHHHHHHccHHHHHHhhHHh
Confidence 999999999976 3578999999999999999999999999754 5788999999999999999999988
Q ss_pred ccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEE
Q 000647 571 KEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVL 645 (1374)
Q Consensus 571 ~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il 645 (1374)
.++ +.|.+|||||||||||||||+++|+||||||||||||+++|+.+.++|.+ .|+|.|+|+||+++++.+|+|+
T Consensus 479 ~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~ 558 (1228)
T KOG0055|consen 479 YDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIA 558 (1228)
T ss_pred hcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEE
Confidence 776 45778999999999999999999999999999999999999999999976 5999999999999999999999
Q ss_pred EecCCCceEEeccCCCccccccccc-c-cccc----ccccchhhhHHHHHhhhhcccCcccCCCCCCc--chhhhhhcCC
Q 000647 646 SLDGEGEWRVHDKRDGSSVVTKSGI-N-MIKS----SETDRQSDAMAVEQAFVTAKKDSAFSNPKAQS--YVSEVIAASP 717 (1374)
Q Consensus 646 ~l~~~g~~~~~~~~~~~~~~~~~~~-~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 717 (1374)
++++ | ..++... +++++...+. . .... ..++...+............+.+. ......+ .........+
T Consensus 559 v~~~-G-~IvE~G~-h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~-~~~~~~~~~~~~~~~~~~~ 634 (1228)
T KOG0055|consen 559 VMEE-G-KIVEQGT-HDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSS-SSPSLSRGSNRSNLLSVKP 634 (1228)
T ss_pred EEEC-C-EEEEecC-HHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhcccccc-ccccccCCccccccccccc
Confidence 9986 3 3444333 3232222121 0 0000 000000000000000000000000 0000000 0000000000
Q ss_pred CCCCCCCCCcCCCCcCCCCcchHHHHhhHhhhccccccchhhHHHH----HHHHHHHHHHHHHHHHhhhchHHHHHHhcC
Q 000647 718 IADHNVPLPVFPQLKSAPRILPLRVADMFKVLVPTVFDKQGAQLLA----VAFLVVSRTWISDRIASLNGTTVKYVLEQD 793 (1374)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1374)
+.......... .......++++.+.+..++... .|.+.+ ...++++.. ++..+..+.......+ +.
T Consensus 635 --~~e~~~~~~~~--~~~~~s~~~i~k~~~pe~~~l~---lG~i~a~i~G~~~P~fa~~-~s~~~~~f~~~~~~~~--~~ 704 (1228)
T KOG0055|consen 635 --EGEDPEEPVSE--EDEKVSFWRIFKLNKPEWPYLL---LGSLGAAIRGATYPLFAYV-FSQVLEAFYPPDDDEL--KR 704 (1228)
T ss_pred --ccccccccccc--ccccccHHHHHHhccchhHHHH---HHHHHHHHhhhhHHHHHHH-HHHHHHHHhCCChHHH--HH
Confidence 00000000000 0012223444444333333221 222222 222222222 1111221110000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CcceeeecCCCCCCCCccchHHHHHHHH
Q 000647 794 KASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLT 872 (1374)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~-~~f~~~~~~~~~~~d~~~ri~~D~~~l~ 872 (1374)
...+|.+ ++++.+++..+..++-.++....+.+|..|++..+++.+|++ ..|||..+++ ..+..|++.|...+-
T Consensus 705 ~~~~~al--~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns---g~l~~RLa~Da~~vr 779 (1228)
T KOG0055|consen 705 EVRAWAL--IFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS---GALSSRLATDASNVR 779 (1228)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc---hHHHHHHhcchHHHH
Confidence 1112222 222333333344444555667888888888999999999987 5999998776 346889998887553
Q ss_pred H----HHHHHHH---HhhHhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHH-HHhhhhhhhHHH
Q 000647 873 T----DLSGLVT---GMVKPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSR-EQQLEGTFRFMH 944 (1374)
Q Consensus 873 ~----~l~~~~~---~~~~~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~le~~~r~~~ 944 (1374)
. .+..++. .++..++..++++|+|++++. ++.++..+.+..+.+.. .....+ ....+...+...
T Consensus 780 ~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~l----a~~Pll~~~~~~~~~~~----~~~~~~~~~~~~ea~~iA~ 851 (1228)
T KOG0055|consen 780 AAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVL----ATFPLLILSGYLQKKFL----KGFSKDDKKAYEEASKIAI 851 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH----hhhhHHHHHHHHHHHHHHH
Confidence 2 2333333 334455667889999999863 22222222222222221 111111 222344455555
Q ss_pred HHHHHhHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhhhcccchhhhh
Q 000647 945 ERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVST 1024 (1374)
Q Consensus 945 ~~l~~~aesIa~~~g~~~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~ 1024 (1374)
|.+. |..||+.|+ .|+++++..-+++..+.+...++.++.|+.+ ...|...+.+++++++|+..+...... +
T Consensus 852 eai~-NIrTV~al~---~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f--~~sqs~~~~~~A~~f~~G~~Li~~g~~--~ 923 (1228)
T KOG0055|consen 852 EAVS-NIRTVAALC---AEEKFMELYKEELEKPRKSSFKRGLISGLGF--GFSQSLLFFVYALSFWYGARLISNGEM--T 923 (1228)
T ss_pred HHHH-hHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhHHHHhcCCc--C
Confidence 5553 677888775 6777664444444456777788888888864 345666778889999998654433211 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEee
Q 000647 1025 QGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSK 1104 (1374)
Q Consensus 1025 ~~~~~~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~ 1104 (1374)
+.++...+ .++.....++++...+.|++.+...++.+||++.++.+..++.+ +....+| ..+|+|+|+|
T Consensus 924 ~~~~~~vf----~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~-----~~~~~~~--~~~G~I~~~~ 992 (1228)
T KOG0055|consen 924 FEDVFRVF----MALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDS-----TSGGKLP--NVKGDIEFRN 992 (1228)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCC-----CCCCccc--cceeEEEEee
Confidence 22222111 12222334555666777888888999999999998765433321 1111222 2589999999
Q ss_pred eEEeCCCc--ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCC
Q 000647 1105 LDIITPSQ--KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQR 1180 (1374)
Q Consensus 1105 V~~~yp~~--~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~ 1180 (1374)
|+|.||++ .+||+|+||+|++||+||+||||||||||++.+|+|||||.+|.|.|||+||+++ +++|++|++|+||
T Consensus 993 V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQE 1072 (1228)
T KOG0055|consen 993 VSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQE 1072 (1228)
T ss_pred eEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccC
Confidence 99999995 5799999999999999999999999999999999999999999999999999998 6999999999999
Q ss_pred CCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChh
Q 000647 1181 PYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLG 1259 (1374)
Q Consensus 1181 P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgG 1259 (1374)
|.||++||||||.||... .+.+++.++++.++.+.++..+|+||||.+ ++|.+||||
T Consensus 1073 P~LF~~TIrENI~YG~~~----------------------vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGG 1130 (1228)
T KOG0055|consen 1073 PVLFNGTIRENIAYGSEE----------------------VSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGG 1130 (1228)
T ss_pred chhhcccHHHHHhccCCC----------------------CCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCch
Confidence 999999999999999321 122334444555556678888999999998 489999999
Q ss_pred hhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--c
Q 000647 1260 EQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--M 1337 (1374)
Q Consensus 1260 QrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~ 1337 (1374)
||||||| |||++||||||||||||||||.++|+.+|+.+.. .
T Consensus 1131 QKQRIAI------------------------------------ARAilRnPkILLLDEATSALDseSErvVQeALd~a~~ 1174 (1228)
T KOG0055|consen 1131 QKQRIAI------------------------------------ARAILRNPKILLLDEATSALDSESERVVQEALDRAME 1174 (1228)
T ss_pred HHHHHHH------------------------------------HHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhc
Confidence 9999999 9999999999999999999999999998887643 6
Q ss_pred CceEEEecCCCCchhhccceEEEEcCC
Q 000647 1338 GITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1338 ~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
|+|+|+|||||+||+..|.+..+.+|+
T Consensus 1175 gRT~IvIAHRLSTIqnaD~I~Vi~~G~ 1201 (1228)
T KOG0055|consen 1175 GRTTIVIAHRLSTIQNADVIAVLKNGK 1201 (1228)
T ss_pred CCcEEEEecchhhhhcCCEEEEEECCE
Confidence 999999999999999999999997663
No 2
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.1e-119 Score=1155.85 Aligned_cols=1109 Identities=18% Similarity=0.215 Sum_probs=701.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLI--SENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIH 184 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l--~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~ 184 (1374)
++...++..+...+...-|.+.+.+++.+.+.+.+.....+ +..++..++.+++..-..|...++++++|..++..+-
T Consensus 203 ~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY 282 (1381)
T KOG0054|consen 203 FLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIY 282 (1381)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHH
Confidence 33334444455555777888888888888776333211111 1111111222333344667788999999999988777
Q ss_pred HHHhhccccccccccCCCCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 000647 185 TRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTM 264 (1374)
Q Consensus 185 ~~yl~~~~~y~~~~~d~~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i 264 (1374)
++-++-...-+ .+...+...+-++.|++++.+....+-... .+++-+++..+.|+...++.....+ +.+++..-+
T Consensus 283 ~K~L~ls~~~~---~~~t~G~ivNlms~D~~ri~~~~~~~h~~w-~~Plqi~~~l~lLy~~LG~sa~~G~-~~~il~~p~ 357 (1381)
T KOG0054|consen 283 RKALRLSNSAR---GETTVGEIVNLMSVDAQRLSDAACFLHLLW-SAPLQIILALYLLYGLLGPSALAGV-AVMVLLIPL 357 (1381)
T ss_pred HhhhcCchhhc---cCCCcchhhhhhhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhChHHHHHH-HHHHHHHHH
Confidence 66553222111 133456778899999999887765442222 2222222222223222222211111 111111112
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHH-HHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 265 MRNFSPAFGKLMSKEQQLEGEYR-QLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLK 343 (1374)
Q Consensus 265 ~~~~~~~l~~l~~~~q~~e~~~r-~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1374)
-.++++...+...++.+. .|-| ...+++.++++.||+|+||+...+++++.-++..+..++...... +..+...
T Consensus 358 n~~~a~~~~~~q~~~m~~-~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~----~~~~~~~ 432 (1381)
T KOG0054|consen 358 NSFLAKKIAKFQKRLMKR-KDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSA----LNSFLNF 432 (1381)
T ss_pred HHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 233444444443332222 2333 466778888999999999999988777766666665554322221 1111111
Q ss_pred HHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 000647 344 YLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISREL 423 (1374)
Q Consensus 344 ~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~ 423 (1374)
... .+..++....|.. ...+..+.. ..+. ..+++..+-.++..+......+.++....+|+.+++..++..
T Consensus 433 ~~p-~lv~~~tF~~~v~--~~~~~lt~~--~aF~----slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~ 503 (1381)
T KOG0054|consen 433 FSP-VLVSVVTFVVFVL--LLGNLLTAS--TAFT----SLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELD 503 (1381)
T ss_pred HHH-HHHHHHHHHHHhh--ccCccccHh--HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 111 1111111111110 001111111 1111 122333334555566666777788888999999998765432
Q ss_pred cccCCCCCCCCCCCccCCCCcEEEeeeEEEcCC--CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccE
Q 000647 424 SIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGH 501 (1374)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~ 501 (1374)
.. .. .. ......+..++++|.++.+.+ ..+.|+|+||+|++|+.++|+||.|||||||+.+|+|+++..+|+
T Consensus 504 ~~-~~--~~---~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~ 577 (1381)
T KOG0054|consen 504 PD-SV--ER---SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGS 577 (1381)
T ss_pred cc-cc--cc---CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccce
Confidence 21 10 00 011123457999999997643 345999999999999999999999999999999999999999999
Q ss_pred EEeCCCCccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCcccc---CCCC
Q 000647 502 IAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEIN---WGDE 578 (1374)
Q Consensus 502 I~~~g~~~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~---~g~~ 578 (1374)
|.++| .++||||.||+++|||||||+||.+ .++++++++++.|.|+++++.+|.++.|+ .|.+
T Consensus 578 v~v~g-------siaYv~Q~pWI~ngTvreNILFG~~-------~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGin 643 (1381)
T KOG0054|consen 578 VAVNG-------SVAYVPQQPWIQNGTVRENILFGSP-------YDEERYDKVIKACALKKDLEILPFGDLTEIGERGIN 643 (1381)
T ss_pred EEEcC-------eEEEeccccHhhCCcHHHhhhcCcc-------ccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccC
Confidence 99987 5999999999999999999999965 46788999999999999999999888774 5789
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhhccEEEEecCCCceEE
Q 000647 579 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDGEGEWRV 655 (1374)
Q Consensus 579 LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~~d~il~l~~~g~~~~ 655 (1374)
|||||||||+||||+|+++||++||+|.||+|.++.+++++.+.. .++|+|+|||.+++++.+|.|++|++ |. +
T Consensus 644 LSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~-G~--I 720 (1381)
T KOG0054|consen 644 LSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKD-GK--I 720 (1381)
T ss_pred CcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecC-Ce--E
Confidence 999999999999999999999999999999999999999997754 48999999999999999999999986 33 2
Q ss_pred eccCCCcccccccc-cccc-ccccccchhhhHHHHHhhhhcccCcccCCCCCCcchhhhhhcCCCC---CCCCCCCcCCC
Q 000647 656 HDKRDGSSVVTKSG-INMI-KSSETDRQSDAMAVEQAFVTAKKDSAFSNPKAQSYVSEVIAASPIA---DHNVPLPVFPQ 730 (1374)
Q Consensus 656 ~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 730 (1374)
...+++++...... .... ...+.+...+ ......+... ..........+........ .........+.
T Consensus 721 ~~~Gty~el~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAELAHEEESEQEEE------ASEKDLESGE-SSRESESRSLESLSSEEEKSKDEKEEEDKLVQE 793 (1381)
T ss_pred ecccCHHHHHhcchhHHHHhhccchhhccc------cccccccccc-cccchhhhhhhhhcccccccccccchhhHHHHH
Confidence 22333332221110 0000 0000000000 0000000000 0000000000000000000 00000000001
Q ss_pred CcCCCCcchHHHHh-hHhhhccccccc--hhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHhcCHHHHHHHHHHHHHH
Q 000647 731 LKSAPRILPLRVAD-MFKVLVPTVFDK--QGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQ 807 (1374)
Q Consensus 731 ~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (1374)
..+..+...+.+.. +++...+.+... ....+......+.+.+|++.|.......... . ..-..+++++.+.
T Consensus 794 ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~---~---~~~~~~~~vY~~l 867 (1381)
T KOG0054|consen 794 EERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT---T---VSTSFYLGVYALL 867 (1381)
T ss_pred HHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc---C---CCcchHHHHHHHH
Confidence 11122223333221 111100000000 0111222234456778888887543111000 0 0112245666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHHHHhhHhH
Q 000647 808 SAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPS 886 (1374)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~~~~~~~ 886 (1374)
+++.+++.....+.....+++...+||++++++++|++ .||+.++.++ +.||++.|++.++..++..+..++..+
T Consensus 868 ~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GR----ILNRFSkD~~~vD~~Lp~~~~~~~~~~ 943 (1381)
T KOG0054|consen 868 GVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGR----ILNRFSKDIDTVDVLLPFTLEFFLQSL 943 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccc----hhhhcccchHHHHHhhHHHHHHHHHHH
Confidence 77777776666777778889999999999999999985 7888766544 699999999999999988777666554
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHh-H------HHhhhcCC
Q 000647 887 VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAH-A------ESVAFFGG 959 (1374)
Q Consensus 887 ~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~-a------esIa~~~g 959 (1374)
+.++...-.++.++.. +.++.+++.+...+++. .|...+.+.+++|+..|+ ++..| + .+|++|+.
T Consensus 944 ~~~l~~~~vi~~~~P~--fli~~~pl~v~~~~~~~---~Y~~tsReLkRLesitRS---Pi~sh~~Etl~GlsTIRAf~~ 1015 (1381)
T KOG0054|consen 944 LNVLGILVVISYVTPW--FLIAIIPLGVIYYFVQR---YYLATSRELKRLESITRS---PIYSHFSETLQGLSTIRAFGK 1015 (1381)
T ss_pred HHHHHHHHHhhHHhHH--HHHHHHHHHHHHHHHHH---HHHHHhHHHHHhhhcccc---hHHHhHHHHhcCcceeeeccc
Confidence 4433322222222211 11112222222222222 133446677788877664 33333 2 35677762
Q ss_pred cHHHHHHHHHHHHHHHHHH-H----HHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhhhcccchhhhhhhHHHHHHHH
Q 000647 960 GAREKAMIESRFRELLEHS-L----LLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRF 1034 (1374)
Q Consensus 960 ~~~e~~~~~~~~~~ll~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~a~~~ 1034 (1374)
| ..+++.+.+.+|.+ + .....+|+.-.++ ++.. .+.++.++...+...+. ..+|.++.++.+
T Consensus 1016 ---~-~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle-~ig~----~~v~~~al~~vl~~~~~----~~~g~vGLslsy 1082 (1381)
T KOG0054|consen 1016 ---E-ERFIQENDELIDENSRAFFLSISANRWLAVRLE-LLGN----LVVLIAALFAVLLPSGL----ISPGLVGLSLSY 1082 (1381)
T ss_pred ---c-HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-HHHH----HHHHHHHHHHHHccCCC----CCcchHHHHHHH
Confidence 3 34456677777633 2 2234455443333 3322 11222222222211110 124555555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEE-eCCCcc
Q 000647 1035 LASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDI-ITPSQK 1113 (1374)
Q Consensus 1035 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~-~yp~~~ 1113 (1374)
.. +....+.++++...+...-..+++||.||.+.+++ .|.+ .+...||++||+ +|+|+|+|+++ |.|+.|
T Consensus 1083 al----~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E-~p~~-~~~~~pp~~WP~---~G~I~f~~~~~RYrp~lp 1153 (1381)
T KOG0054|consen 1083 AL----QLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSE-APLE-IEESRPPPSWPS---KGEIEFEDLSLRYRPNLP 1153 (1381)
T ss_pred HH----HHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCC-CCCC-CcCCCCCCCCCC---CCeEEEEEeEEEeCCCCc
Confidence 32 22233334444433334444689999999987654 2222 222237889998 89999999999 557789
Q ss_pred cccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHH
Q 000647 1114 LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQ 1191 (1374)
Q Consensus 1114 ~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~N 1191 (1374)
+||||+||+|+||||||||||||||||||+++|+|+.||.+|+|.|||+||+++ +++|++|++|||||+||+||+|+|
T Consensus 1154 ~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~N 1233 (1381)
T KOG0054|consen 1154 LVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFN 1233 (1381)
T ss_pred chhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccc
Confidence 999999999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred hccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccch
Q 000647 1192 IIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHL 1270 (1374)
Q Consensus 1192 l~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~ 1270 (1374)
|| |+. +.+|+++|++||.++|++.++++|+|||+.+ +.|++||.||||++|+
T Consensus 1234 LD-Pf~----------------------e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCL---- 1286 (1381)
T KOG0054|consen 1234 LD-PFD----------------------EYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCL---- 1286 (1381)
T ss_pred cC-ccc----------------------ccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHH----
Confidence 97 764 3678999999999999999999999999997 5799999999999999
Q ss_pred hhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCC
Q 000647 1271 VLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRP 1348 (1374)
Q Consensus 1271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl 1348 (1374)
||||||++|||+|||||+++|.+|+..+|+++|+ .+|||||||||+
T Consensus 1287 --------------------------------ARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl 1334 (1381)
T KOG0054|consen 1287 --------------------------------ARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRL 1334 (1381)
T ss_pred --------------------------------HHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeecc
Confidence 9999999999999999999999999999999986 699999999999
Q ss_pred CchhhccceEEEEcC
Q 000647 1349 ALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1349 ~~i~~~~~~l~l~~g 1363 (1374)
.||-..|++|+|.+|
T Consensus 1335 ~TVmd~DrVlVld~G 1349 (1381)
T KOG0054|consen 1335 NTVMDSDRVLVLDAG 1349 (1381)
T ss_pred chhhhcCeEEEeeCC
Confidence 999999999999555
No 3
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.4e-110 Score=1125.74 Aligned_cols=1194 Identities=15% Similarity=0.154 Sum_probs=712.3
Q ss_pred hccccCCCCcccccCCCCCCCccCccccccc-cccccccccccchHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHH
Q 000647 42 SRFSSKKPDAFGHYNGLGDSERKPDKAVANR-SNIKKANQKKGGLKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTAL 120 (1374)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~l 120 (1374)
..|++++.+..|.-|-...+....+..-... ...++.+..+.+ +.++++...+. ..+.+++.+++.++....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~i~~i~~~~~~~~ 75 (1466)
T PTZ00265 3 KDQRQKKDNNSGGGNLSIKDEVEKELNKKGTFELYKKIKTQKIP---FFLPFKCLPAS----HRKLLGVSFVCATISGGT 75 (1466)
T ss_pred hhhhhhcccCCCCCcccccccccchhhhcccccccccccccccc---HHHHHhcCCHH----HHHHHHHHHHHHHHHHHH
Confidence 3466677666666555544443111110000 000111113333 44555555432 224455666667777778
Q ss_pred HHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccC
Q 000647 121 SNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVD 200 (1374)
Q Consensus 121 s~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d 200 (1374)
...++.+.+.++|.+...+ ..... .+..++..++..+..|+...+....-++++.+++.+||++....+++|+|
T Consensus 76 ~p~~~~i~g~iid~~~~~~--~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd 149 (1466)
T PTZ00265 76 LPFFVSVFGVIMKNMNLGE--NVNDI----IFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHD 149 (1466)
T ss_pred HHHHHHHHHHHHHHHhccc--hHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHc
Confidence 8888899999998764221 11111 11122222334445566666666666679999999999999999999998
Q ss_pred CCCC-ChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000647 201 GRIT-HPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKE 279 (1374)
Q Consensus 201 ~~~~-npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~ 279 (1374)
...+ ...+|+++|++.+.+.+...+..++..++. ++..+.++++.+|.+++++++.+++..++..++++.+.+...+.
T Consensus 150 ~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~-~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~ 228 (1466)
T PTZ00265 150 NNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASA-FLGLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTS 228 (1466)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7643 667888888888877777766666655443 33344455678999988877776666666666777776666666
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 000647 280 QQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFF 359 (1374)
Q Consensus 280 q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 359 (1374)
++..+++.........++++|+.|++|+.+.+++++......+.. .+.....++...+........+++++ |+
T Consensus 229 ~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~---~k~~~~~~~~~~~~~~~~~~~~~l~~----~~ 301 (1466)
T PTZ00265 229 LLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYI---LKANFMESLHIGMINGFILASYAFGF----WY 301 (1466)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH----HH
Confidence 666677777777777889999999999999876665444433322 22222222222211111111111111 12
Q ss_pred cccccC---------CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCC
Q 000647 360 AGNLKP---------DTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSP 430 (1374)
Q Consensus 360 ~g~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~ 430 (1374)
++.+.. +..+.|. +++.+ ...+ ..+..++.+......+.....+++|+.++++.+++.+....
T Consensus 302 G~~lv~~g~~~~~~~~~~t~g~--v~~~~---~~~l-~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~~~-- 373 (1466)
T PTZ00265 302 GTRIIISDLSNQQPNNDFHGGS--VISIL---LGVL-ISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVENNDD-- 373 (1466)
T ss_pred HHHHHHcCCcccccccccchhH--HHHHH---HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC--
Confidence 221111 1123332 22111 1111 22233455566677888889999999999887654321100
Q ss_pred CCCCCCCccCCCCcEEEeeeEEEcCCC--CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeC-CC
Q 000647 431 QRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKP-GV 507 (1374)
Q Consensus 431 ~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~-g~ 507 (1374)
....+....|+++||+|.||+. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++ |.
T Consensus 374 -----~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~ 448 (1466)
T PTZ00265 374 -----GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSH 448 (1466)
T ss_pred -----CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCc
Confidence 0001112369999999999863 479999999999999999999999999999999999999999999995 54
Q ss_pred C------ccccccEEEEecCCCCCcCCHHHHhcCCCCCC-----------------------------------------
Q 000647 508 G------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSD----------------------------------------- 540 (1374)
Q Consensus 508 ~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~----------------------------------------- 540 (1374)
+ ..++++|+||||+|.+|++|++|||.++....
T Consensus 449 ~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (1466)
T PTZ00265 449 NLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNT 528 (1466)
T ss_pred chhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccc
Confidence 3 23578899999999999999999999974210
Q ss_pred ----------cccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCC
Q 000647 541 ----------QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTS 607 (1374)
Q Consensus 541 ----------~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEpts 607 (1374)
......+++++.++++.++++++++++|.+.++ +.+.+|||||||||+|||||+++|++||||||||
T Consensus 529 ~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTS 608 (1466)
T PTZ00265 529 TDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATS 608 (1466)
T ss_pred cchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 000134678899999999999999999987665 3467999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecCC--C------------------------------
Q 000647 608 AVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGE--G------------------------------ 651 (1374)
Q Consensus 608 aLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~~--g------------------------------ 651 (1374)
+||+++++.+.+.+++ .|+|+|+||||++.++.+|+|++|+++ |
T Consensus 609 aLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (1466)
T PTZ00265 609 SLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNN 688 (1466)
T ss_pred ccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccccccccccccccccc
Confidence 9999999999988865 379999999999999999999999762 1
Q ss_pred -------------ceEEeccCCCccccc-ccc-cc-ccccccccchhhhHHHHHhhhhcccCcccCCCCCCcchhhhh--
Q 000647 652 -------------EWRVHDKRDGSSVVT-KSG-IN-MIKSSETDRQSDAMAVEQAFVTAKKDSAFSNPKAQSYVSEVI-- 713 (1374)
Q Consensus 652 -------------~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 713 (1374)
+..++.+ ++.+++. ..+ +. ................. .............+..........
T Consensus 689 ~~~~~~~~~~~~g~~ive~G-th~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (1466)
T PTZ00265 689 NNNNNNNKINNAGSYIIEQG-THDALMKNKNGIYYTMINNQKVSSKKSSNNDN-DKDSDMKSSAYKDSERGYDPDEMNGN 766 (1466)
T ss_pred cccccccccccCCceeEeeC-CHHHHHhccCCcHHHHHhhhcccccccccccc-cccccccccccccccccccccccccc
Confidence 1122211 1111110 000 00 00000000000000000 000000000000000000000000
Q ss_pred --hc-------C-CCC-----CCC-C--CCCcCCCC-cCCCCcchHHHHhhHhhhccccccchhhHHH----HHHHHHHH
Q 000647 714 --AA-------S-PIA-----DHN-V--PLPVFPQL-KSAPRILPLRVADMFKVLVPTVFDKQGAQLL----AVAFLVVS 770 (1374)
Q Consensus 714 --~~-------~-~~~-----~~~-~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~ 770 (1374)
.. . +.. ... . +.+..... ...+ ..+..+..+++.+++.......+.++ +.+.+++.
T Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (1466)
T PTZ00265 767 SKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKP-KAPNNLRIVYREIFSYKKDVTIIALSILVAGGLYPVFA 845 (1466)
T ss_pred ccccccccccccccccccccccchhccccchhhhhcccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 000 000 0 00000000 0000 01111111122222211100011111 11111111
Q ss_pred HHHHHHHHHhhhchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-ccee
Q 000647 771 RTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYK 849 (1374)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~ 849 (1374)
. .++..+...... ... .....++ ..+.++.+++..++.+...++..+++.++..++..++++++++.+ .||+
T Consensus 846 ~-~~~~~i~~~~~~--~~~--~~~~~~~--~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd 918 (1466)
T PTZ00265 846 L-LYAKYVSTLFDF--ANL--EANSNKY--SLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFD 918 (1466)
T ss_pred H-HHHHHHHHHhcc--hHH--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhC
Confidence 1 111111111000 000 0001111 122222333344444555666777788888888888888888875 7887
Q ss_pred eecCCCCCCCCccchHHHHHHHHHHHHHHH----H---HhhHhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH-
Q 000647 850 VFNMSSKSIDADQRITHDLEKLTTDLSGLV----T---GMVKPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRS- 921 (1374)
Q Consensus 850 ~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~----~---~~~~~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~- 921 (1374)
..+.++ .+..+|++.|++.+...+...+ . .++..++.+++++|+++++.. + .++++...+.+.
T Consensus 919 ~~~~~~--G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~----~---~~~~~~~~~~~~~ 989 (1466)
T PTZ00265 919 QDKHAP--GLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLT----G---TYFIFMRVFAIRA 989 (1466)
T ss_pred CCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H---HHHHHHHHHHHHH
Confidence 532322 3467999999987765433222 1 122233445677887766531 1 111111111110
Q ss_pred hc---Ccccccc-----------HHHHhhhhhhhHHHHHHHHhHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 000647 922 VT---PEFGDLT-----------SREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLL-LKKKW 986 (1374)
Q Consensus 922 ~~---~~~~~~~-----------~~~~~le~~~r~~~~~l~~~aesIa~~~g~~~e~~~~~~~~~~ll~~~~~~-~~~~~ 986 (1374)
.. ....... ...+..+.......|.+ .+.++|..|+.+..+ .++|.+..+..... .+..+
T Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l-~gi~tVka~~~e~~~----~~~~~~~~~~~~~~~~~~~~ 1064 (1466)
T PTZ00265 990 RLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAF-YNMNTVIIYGLEDYF----CNLIEKAIDYSNKGQKRKTL 1064 (1466)
T ss_pred HHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHH-hcHHHHHHhcchHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 00 0000000 00000001111222222 245677778743333 24455555433222 22222
Q ss_pred HhhhHHHHHHhhhhhHHHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 987 LFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRI 1066 (1374)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri 1066 (1374)
+.++...+ .++...+..++.++|+........ .+.+.+...+. ++......++.+....+.+.....+.+|+
T Consensus 1065 ~~~~~~~~--~~~~~~~~~~~~~~~G~~lv~~g~--it~g~l~~~~~----~~~~~~~~~~~l~~~~~~~~~a~~a~~ri 1136 (1466)
T PTZ00265 1065 VNSMLWGF--SQSAQLFINSFAYWFGSFLIRRGT--ILVDDFMKSLF----TFLFTGSYAGKLMSLKGDSENAKLSFEKY 1136 (1466)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCC--CCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22332211 122233334455566543221111 12233222111 11112223455667777888888999999
Q ss_pred HHHHHHHHhcCCCCCCccCCCCCCC-CCCCCCCCEEEeeeEEeCCCc--ccccccceEEEeCCCeEEEEcCCCCcHHHHH
Q 000647 1067 FELEELLDAAQPGDDEISGSSQHKW-NSTDYQDSISFSKLDIITPSQ--KLLARQLTFEIVPGKSLLVTGPNGSGKSSVF 1143 (1374)
Q Consensus 1067 ~~l~~~~~~~~~~~~~~~~~~~~~w-~~~~~~g~I~f~~V~~~yp~~--~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~ 1143 (1374)
+++++..++.+.. +... ... +.....|.|+|+||+|.||++ ++||+|+||+|+|||++|||||||||||||+
T Consensus 1137 ~~ll~~~~~~~~~---~~~~--~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~ 1211 (1466)
T PTZ00265 1137 YPLIIRKSNIDVR---DNGG--IRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVM 1211 (1466)
T ss_pred HHHHCCCCcCCCC---CCcc--cccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHH
Confidence 9998653221110 0000 000 011236889999999999963 4899999999999999999999999999999
Q ss_pred HHHhcCCCC------------------------------------------------------CCCeEecCCCccccc--
Q 000647 1144 RVLRGLWPV------------------------------------------------------VSGSLTKPSQHIDEE-- 1167 (1374)
Q Consensus 1144 ~~L~rl~~~------------------------------------------------------~~G~I~idg~dI~~~-- 1167 (1374)
++|.|||+| .+|+|++||+||+++
T Consensus 1212 ~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~ 1291 (1466)
T PTZ00265 1212 SLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNL 1291 (1466)
T ss_pred HHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCH
Confidence 999999999 599999999999998
Q ss_pred cCCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCc
Q 000647 1168 AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 1247 (1374)
Q Consensus 1168 ~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gld 1247 (1374)
..+|++|+||||||+||+|||||||.|+.+ +..|++++++++.++++++++++|+|||
T Consensus 1292 ~~lR~~i~~V~Qep~LF~gTIreNI~~g~~----------------------~at~eeI~~A~k~A~l~~fI~~LP~Gyd 1349 (1466)
T PTZ00265 1292 KDLRNLFSIVSQEPMLFNMSIYENIKFGKE----------------------DATREDVKRACKFAAIDEFIESLPNKYD 1349 (1466)
T ss_pred HHHHhhccEeCCCCccccccHHHHHhcCCC----------------------CCCHHHHHHHHHHcCCHHHHHhCccccC
Confidence 578999999999999999999999999743 2356778889999999999999999999
Q ss_pred cccc-cccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHH
Q 000647 1248 ANLN-WEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDV 1326 (1374)
Q Consensus 1248 t~~~-~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~ 1326 (1374)
|.++ .|.+||||||||||| ||||+|+|+||||||||||||.++
T Consensus 1350 T~VGe~G~~LSGGQkQRIaI------------------------------------ARALlr~p~ILLLDEaTSaLD~~s 1393 (1466)
T PTZ00265 1350 TNVGPYGKSLSGGQKQRIAI------------------------------------ARALLREPKILLLDEATSSLDSNS 1393 (1466)
T ss_pred CccCCCCCcCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCcccccCHHH
Confidence 9984 789999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHh----cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1327 EEQLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1327 e~~l~~~~~~----~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
|+.+++.+.. .++|+|+||||+++++..|+++.|.+|+
T Consensus 1394 E~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~ 1435 (1466)
T PTZ00265 1394 EKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPD 1435 (1466)
T ss_pred HHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCC
Confidence 9998876653 3899999999999999999999997643
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.3e-109 Score=1130.02 Aligned_cols=1099 Identities=16% Similarity=0.163 Sum_probs=651.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHH--HHHHHH--HHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMH--STSKYI--TGTLSLQFRKIVTKL 182 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~--~~~~yl--~~~l~~~~R~~lt~~ 182 (1374)
++..+++.++...+.+..|.+.+.+++.+.+++.+ ....+. .+++ ++..++. ....|. ..+++.+.|..+...
T Consensus 303 ~~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~~~-~~~~~~-~~~l-~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~ 379 (1622)
T PLN03130 303 FWLGGFFKIGNDLSQFVGPLLLNLLLESMQNGEPA-WIGYIY-AFSI-FVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAA 379 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-hHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566777888888999999999988765532 111111 1111 1111111 112232 345666666655554
Q ss_pred HHHHHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHH
Q 000647 183 IHTRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILA-YVLG 260 (1374)
Q Consensus 183 l~~~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~-~~~~ 260 (1374)
+ +++....+...+.+ ..++..+++++|++++.+.... +..+...++..++..+.+.. ..++..++.+ .+++
T Consensus 380 i----~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~~-l~~l~~~pl~ii~~~~lL~~--~lg~~~l~g~~v~~l 452 (1622)
T PLN03130 380 V----FRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQQ-LHTLWSAPFRIIIAMVLLYQ--QLGVASLIGSLMLVL 452 (1622)
T ss_pred H----HHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 4 44544444444433 3568889999999998877633 33333333333222222211 1112111111 1111
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 261 AGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDF 340 (1374)
Q Consensus 261 ~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~ 340 (1374)
...+..++.+.+.+...+..+...+.-.....+.++++.||+|++|+...+++++..++..+..++.. ....+..+
T Consensus 453 ~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~----~~~~~~~~ 528 (1622)
T PLN03130 453 MFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQ----LLSAFNSF 528 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence 11122334555555554444444444456667777899999999999988777665555444333221 11111111
Q ss_pred HHHHHHHHHHHHHhhh-hhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000647 341 LLKYLGATVAVILIIE-PFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVI 419 (1374)
Q Consensus 341 ~~~~~~~~~~~il~~~-~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~ 419 (1374)
+.......++++.+.. .+..| ..+.|. +++. ..++..+..++..+......+.+...+.+|+.++++.
T Consensus 529 ~~~~~~~~v~~~~fg~~~~~~g-----~Lt~g~--vf~~----l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~ 597 (1622)
T PLN03130 529 ILNSIPVLVTVVSFGVFTLLGG-----DLTPAR--AFTS----LSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLA 597 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-----CCCHHH--HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1111111111111100 01122 224443 2222 2233344456666777778889999999999999865
Q ss_pred cccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCC--CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC
Q 000647 420 SRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL 497 (1374)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~ 497 (1374)
++.....+.. .....+.|+++|++|.|++ ++++|+|+||+|++||.++|+||||||||||+++|+|+++|
T Consensus 598 ~e~~~~~~~~--------~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~ 669 (1622)
T PLN03130 598 EERVLLPNPP--------LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPP 669 (1622)
T ss_pred cccccccCCc--------ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhcc
Confidence 4322110000 0011246999999999975 36799999999999999999999999999999999999999
Q ss_pred Cc-cEEEeCCCCccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---
Q 000647 498 VS-GHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI--- 573 (1374)
Q Consensus 498 ~~-G~I~~~g~~~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~--- 573 (1374)
.+ |+|.+. ++|+||||+||+|++||||||.|+.+ .+++++.++++.|+|+++++.+|.++++
T Consensus 670 ~~GG~I~l~-------~~Iayv~Q~p~LfngTIreNI~fg~~-------~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IG 735 (1622)
T PLN03130 670 RSDASVVIR-------GTVAYVPQVSWIFNATVRDNILFGSP-------FDPERYERAIDVTALQHDLDLLPGGDLTEIG 735 (1622)
T ss_pred CCCceEEEc-------CeEEEEcCccccCCCCHHHHHhCCCc-------ccHHHHHHHHHHhCcHHHHHhCCCccccccc
Confidence 99 999864 47999999999999999999999854 3577899999999999999999988776
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHH-Hh--cCCEEEEEccChhhHhhccEEEEecCC
Q 000647 574 NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKV-RA--MGTSCITISHRPALVAFHDVVLSLDGE 650 (1374)
Q Consensus 574 ~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l-~~--~~~TiI~vtH~~~~~~~~d~il~l~~~ 650 (1374)
+.|.+|||||||||+||||+|++|+++||||||||||+++++++++.+ +. .++|+|+|||+++.++.+|+|++|++
T Consensus 736 e~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~- 814 (1622)
T PLN03130 736 ERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHE- 814 (1622)
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeC-
Confidence 457799999999999999999999999999999999999999987654 33 58999999999999999999999985
Q ss_pred CceEEeccCCCcccccccc-cc-cccccc-ccchhhhHHHHHhhhhcccCcccCCCCCCcchhhhhhcCCCCCCCCCCCc
Q 000647 651 GEWRVHDKRDGSSVVTKSG-IN-MIKSSE-TDRQSDAMAVEQAFVTAKKDSAFSNPKAQSYVSEVIAASPIADHNVPLPV 727 (1374)
Q Consensus 651 g~~~~~~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (1374)
|. ..+. ++++......+ +. ...... .+....... . . ...................+. ..............
T Consensus 815 G~-i~e~-Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 888 (1622)
T PLN03130 815 GM-IKEE-GTYEELSNNGPLFQKLMENAGKMEEYVEENG-E-E-EDDQTSSKPVANGNANNLKKD-SSSKKKSKEGKSVL 888 (1622)
T ss_pred CE-EEEe-CCHHHHHhcchhHHHHHHhcccccccccccc-c-c-ccccccccccccccccccccc-ccccccccccchhh
Confidence 43 2222 22222111110 00 000000 000000000 0 0 000000000000000000000 00000000000000
Q ss_pred CCCCcCCCCcchHHHH-hhHhhhcccccc--chhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHhcCHHHHHHHHHHH
Q 000647 728 FPQLKSAPRILPLRVA-DMFKVLVPTVFD--KQGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVS 804 (1374)
Q Consensus 728 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1374)
.....+..+...+.+. .+++.....+.. .....++...+.+++.+|++.|....... .+...+ +++++
T Consensus 889 ~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-------~~~~~~--~~~i~ 959 (1622)
T PLN03130 889 IKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPK-------THGPLF--YNLIY 959 (1622)
T ss_pred hhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-------CCchhH--HHHHH
Confidence 0001111121122211 111110000000 00011111222234556776665432110 011111 22333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHHHHhh
Q 000647 805 VLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMV 883 (1374)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~~~~ 883 (1374)
++.+++..++.....++..+.+.+...++|.++++++++.+ .||+..+. .++.+|++.|++.++..++..+..++
T Consensus 960 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~----G~IlnR~s~Di~~id~~l~~~~~~~~ 1035 (1622)
T PLN03130 960 ALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPL----GRIINRFAKDLGDIDRNVAVFVNMFL 1035 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCc----hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444555667788888999999999999975 78874433 45789999999999876654433332
Q ss_pred HhH-------HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhh-----hhhHHHHHHHHhH
Q 000647 884 KPS-------VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEG-----TFRFMHERLRAHA 951 (1374)
Q Consensus 884 ~~~-------~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~-----~~r~~~~~l~~~a 951 (1374)
..+ +.+.+..|. ..+. .++++++++.+...+.+ ...+..+++. .+....|.+. ..
T Consensus 1036 ~~~~~~i~~~i~i~~~~~~-~~~~---~~pl~~~~~~~~~~~~~--------~~r~~~r~~~~~~s~~~~~~~Etl~-Gi 1102 (1622)
T PLN03130 1036 GQIFQLLSTFVLIGIVSTI-SLWA---IMPLLVLFYGAYLYYQS--------TAREVKRLDSITRSPVYAQFGEALN-GL 1102 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHH---HHHHHHHHHHHHHHHHH--------HHHHHHHHHHHhcchHHHHHHHHhC-CH
Confidence 221 112222221 1110 11111111111111111 1112222221 2222333333 45
Q ss_pred HHhhhcCCcHHHHHHHHHHHHHHHHHHHHH-----HHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhhhcccchh-hhhh
Q 000647 952 ESVAFFGGGAREKAMIESRFRELLEHSLLL-----LKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRAL-VSTQ 1025 (1374)
Q Consensus 952 esIa~~~g~~~e~~~~~~~~~~ll~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-~~~~ 1025 (1374)
.+|..|+. |+ .+.+.+.+.++..... ...+|+...++ ++.. .+.+..+ .++....+.... ....
T Consensus 1103 ~tIraf~~---~~-~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~-~~~~----~~i~~~~-~~~v~~~~~~~~~~~~~ 1172 (1622)
T PLN03130 1103 STIRAYKA---YD-RMAEINGRSMDNNIRFTLVNMSSNRWLAIRLE-TLGG----LMIWLTA-SFAVMQNGRAENQAAFA 1172 (1622)
T ss_pred HHHHhCcH---HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH----HHHHHHH-HHHHHcccccccchhhh
Confidence 77888873 33 2344455555433211 12233322221 1111 1111111 111111110000 0001
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeee
Q 000647 1026 GELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKL 1105 (1374)
Q Consensus 1026 ~~~~~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V 1105 (1374)
+.++.++. ...+....+..+......+.....+++|+.++.+.+++.+. ..+...+++.||. +|.|+|+||
T Consensus 1173 ~~~G~~ls----~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~--~~~~~~~~~~wp~---~g~I~f~nV 1243 (1622)
T PLN03130 1173 STMGLLLS----YALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPL--VIENNRPPPGWPS---SGSIKFEDV 1243 (1622)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccc--cccCCCCCCCCCC---CCcEEEEEE
Confidence 11222221 12223334444555555566677899999999765332211 0111234557876 689999999
Q ss_pred EEeCCC-cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCC
Q 000647 1106 DIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPY 1182 (1374)
Q Consensus 1106 ~~~yp~-~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~ 1182 (1374)
+|+|+. .++||+|+||+|+||||||||||||||||||+++|+|||+|.+|+|.+||+||+++ +.+|++|++|||||+
T Consensus 1244 sf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~ 1323 (1622)
T PLN03130 1244 VLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPV 1323 (1622)
T ss_pred EEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCc
Confidence 998854 57899999999999999999999999999999999999999999999999999998 688999999999999
Q ss_pred CCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhh
Q 000647 1183 TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQ 1261 (1374)
Q Consensus 1183 Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQr 1261 (1374)
||+|||||||++.. +..|++++++++.++++++++++|+||||.+ +.|.+||||||
T Consensus 1324 LF~GTIreNLd~~~-----------------------~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQr 1380 (1622)
T PLN03130 1324 LFSGTVRFNLDPFN-----------------------EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQR 1380 (1622)
T ss_pred cccccHHHHhCcCC-----------------------CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHH
Confidence 99999999998542 1357889999999999999999999999998 47899999999
Q ss_pred hhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCc
Q 000647 1262 QRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGI 1339 (1374)
Q Consensus 1262 Qrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~ 1339 (1374)
||||| ||||+|+||||||||||||||.++|+.+++.+++ .+|
T Consensus 1381 QrlaL------------------------------------ARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~ 1424 (1622)
T PLN03130 1381 QLLSL------------------------------------ARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSC 1424 (1622)
T ss_pred HHHHH------------------------------------HHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
Confidence 99999 9999999999999999999999999999998765 589
Q ss_pred eEEEecCCCCchhhccceEEEEcC
Q 000647 1340 TFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1340 TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
|+|+||||++++...|+++.|.+|
T Consensus 1425 TvI~IAHRL~tI~~~DrIlVLd~G 1448 (1622)
T PLN03130 1425 TMLIIAHRLNTIIDCDRILVLDAG 1448 (1622)
T ss_pred EEEEEeCChHHHHhCCEEEEEECC
Confidence 999999999999999999999655
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.7e-109 Score=1127.26 Aligned_cols=1097 Identities=16% Similarity=0.158 Sum_probs=652.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHS----TSKYITGTLSLQFRKIVTKL 182 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~----~~~yl~~~l~~~~R~~lt~~ 182 (1374)
++..+++.++.+.+....|.+.+.+++.+.+.+.+. ... . +.++.++..++.. -..+...+++.+.|..+...
T Consensus 303 ~~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~~~~-~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~ 379 (1495)
T PLN03232 303 FWLGGIFKIGHDLSQFVGPVILSHLLQSMQEGDPAW-VGY-V-YAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAA 379 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-hHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455567888888889999999999887655322 111 1 1112222222221 12233356667666666555
Q ss_pred HHHHHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH-HH
Q 000647 183 IHTRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYV-LG 260 (1374)
Q Consensus 183 l~~~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~-~~ 260 (1374)
+.+ +....+...+++ ..++..+|+++|++++.+... .+..+...++..++..+.++. ..++..++.+.+ ++
T Consensus 380 i~~----k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~~-~l~~l~~~p~~ii~~~~~l~~--~lg~~~l~~~~v~~l 452 (1495)
T PLN03232 380 IFH----KSLRLTHEARKNFASGKVTNMITTDANALQQIAE-QLHGLWSAPFRIIVSMVLLYQ--QLGVASLFGSLILFL 452 (1495)
T ss_pred HHH----HHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH--HHhHHHHHHHHHHHH
Confidence 544 444444443333 356888999999999887653 333333333322222222211 111111111111 11
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 261 AGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDF 340 (1374)
Q Consensus 261 ~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~ 340 (1374)
...+..++++...+...+.++...+.......+.++++.||+|++|+.+.+++++..++..+..++.... .++ ..+
T Consensus 453 ~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~---~~~-~~~ 528 (1495)
T PLN03232 453 LIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLL---SAF-NSF 528 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHH-HHH
Confidence 1112233455555555555554444445666777789999999999999877776665555444332211 111 111
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000647 341 LLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVIS 420 (1374)
Q Consensus 341 ~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~ 420 (1374)
+.......+. ++....+. +..+..+.|. +++. ..++..+..++..+......+.+...+.+|+.++++.+
T Consensus 529 ~~~~~~~~~~-~~~fg~~~---v~~~~lt~g~--vf~~----l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~ 598 (1495)
T PLN03232 529 ILNSIPVVVT-LVSFGVFV---LLGGDLTPAR--AFTS----LSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSE 598 (1495)
T ss_pred HHHHHHHHHH-HHHHHHHH---HhCCCCCHHH--HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 1111111111 11111110 0111224443 2222 22334444566677777788899999999999998755
Q ss_pred ccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCC--CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCC
Q 000647 421 RELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV 498 (1374)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~ 498 (1374)
++..... . . .....+.++++|++|.|++ ++++|+|+||+|++||.++|+||||||||||+++|+|+++|.
T Consensus 599 ~~~~~~~--~----~--~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~ 670 (1495)
T PLN03232 599 ERILAQN--P----P--LQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHA 670 (1495)
T ss_pred ccccccc--C----C--cCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCccc
Confidence 4321100 0 0 0011246999999999975 367999999999999999999999999999999999999999
Q ss_pred ccEEEeCCCCccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cC
Q 000647 499 SGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NW 575 (1374)
Q Consensus 499 ~G~I~~~g~~~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~ 575 (1374)
+|.+. .++++|+||||+||+|++||||||.|+.+ .++++++++++.|+|+++++.+|.++++ +.
T Consensus 671 ~G~i~------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~-------~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~ 737 (1495)
T PLN03232 671 ETSSV------VIRGSVAYVPQVSWIFNATVRENILFGSD-------FESERYWRAIDVTALQHDLDLLPGRDLTEIGER 737 (1495)
T ss_pred CCCEE------EecCcEEEEcCccccccccHHHHhhcCCc-------cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCC
Confidence 98764 24568999999999999999999999853 4678899999999999999999988776 45
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHH-Hh--cCCEEEEEccChhhHhhccEEEEecCCCc
Q 000647 576 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKV-RA--MGTSCITISHRPALVAFHDVVLSLDGEGE 652 (1374)
Q Consensus 576 g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l-~~--~~~TiI~vtH~~~~~~~~d~il~l~~~g~ 652 (1374)
|.+|||||||||+||||+|++|+|+||||||||||+++++++++.+ +. .++|+|+|||+++.++.+|+|++|++ |.
T Consensus 738 G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~-G~ 816 (1495)
T PLN03232 738 GVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSE-GM 816 (1495)
T ss_pred CcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeC-CE
Confidence 7799999999999999999999999999999999999999998764 33 58999999999999999999999985 33
Q ss_pred eEEeccCCCcccccccc-cc-cccccc--ccchhhhHHHHHhhhhcccCcccCCCCCCcchhhhhhcCCCCCCCCCCCcC
Q 000647 653 WRVHDKRDGSSVVTKSG-IN-MIKSSE--TDRQSDAMAVEQAFVTAKKDSAFSNPKAQSYVSEVIAASPIADHNVPLPVF 728 (1374)
Q Consensus 653 ~~~~~~~~~~~~~~~~~-~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (1374)
..+. ++++......+ +. ...... ++........+ ... .... ........ ... ..+...........
T Consensus 817 -i~~~-Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~--~~~~-~~~~~~~~--~~~--~~~~~~~~~~~~~~ 886 (1495)
T PLN03232 817 -IKEE-GTFAELSKSGSLFKKLMENAGKMDATQEVNTNDE-NIL--KLGP-TVTIDVSE--RNL--GSTKQGKRGRSVLV 886 (1495)
T ss_pred -EEEe-cCHHHHHhcchhHHHHHHhccccccccccccccc-ccc--cccc-cccccccc--ccc--ccccccccchhhhh
Confidence 3322 22222111110 00 000000 00000000000 000 0000 00000000 000 00000000000000
Q ss_pred CCCcCCCCcchHHH-HhhHhhhccccccc--hhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHhcCHHHHHHHHHHHH
Q 000647 729 PQLKSAPRILPLRV-ADMFKVLVPTVFDK--QGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSV 805 (1374)
Q Consensus 729 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1374)
....++.+...+.. ..+++.....+... ....++......+..+|++.|....... ..... .++++++
T Consensus 887 ~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-------~~~~~--~~l~~y~ 957 (1495)
T PLN03232 887 KQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPK-------SYSPG--FYIVVYA 957 (1495)
T ss_pred hHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-------CCCcc--hHHHHHH
Confidence 00111111112211 11111111000000 0001111122234566777665421100 00011 1234444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHHHHhhH
Q 000647 806 LQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVK 884 (1374)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~~~~~ 884 (1374)
+.+++..++.....++..+.+.++..++|.++++++++.+ .||+..+. .++.+|+++|++.++..++..+..++.
T Consensus 958 ~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~----G~ilnr~s~Di~~id~~l~~~~~~~~~ 1033 (1495)
T PLN03232 958 LLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPT----GRVINRFSKDIGDIDRNVANLMNMFMN 1033 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCc----hHHHHHhHhhHHHHHHHHHHHHHHHHH
Confidence 4444444444455556677788888999999999999975 78874433 457899999999998877654443332
Q ss_pred hHH-------HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhh-----hhhhHHHHHHHHhHH
Q 000647 885 PSV-------DILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLE-----GTFRFMHERLRAHAE 952 (1374)
Q Consensus 885 ~~~-------~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le-----~~~r~~~~~l~~~ae 952 (1374)
.++ .+++..+. ..+. .+++++.++.....+.+ ...+.++.+ ..+....|.+. ..+
T Consensus 1034 ~~~~~i~~~i~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~--------~~r~~~~~~~~~~s~~~~~~~E~l~-G~~ 1100 (1495)
T PLN03232 1034 QLWQLLSTFALIGTVSTI-SLWA---IMPLLILFYAAYLYYQS--------TSREVRRLDSVTRSPIYAQFGEALN-GLS 1100 (1495)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHH---HHHHHHHHHHHHHHHHH--------HHHHHHHHHHHhcChHHHHHHHHhc-ChH
Confidence 211 11111111 0100 01111111111111111 111122221 12223333332 457
Q ss_pred HhhhcCCcHHHHHHHHHHHHHHHHHHHHHH-----HHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhhhcccchh-hhhhh
Q 000647 953 SVAFFGGGAREKAMIESRFRELLEHSLLLL-----KKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRAL-VSTQG 1026 (1374)
Q Consensus 953 sIa~~~g~~~e~~~~~~~~~~ll~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-~~~~~ 1026 (1374)
+|+.|+. |+. +.+.+.+..+...... ...|+.... ..+. ..+.+..+ .+.....+.... ....+
T Consensus 1101 tIraf~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~-~~~~----~~~~~~~~-~~~v~~~~~~~~~~~~~~ 1170 (1495)
T PLN03232 1101 SIRAYKA---YDR-MAKINGKSMDNNIRFTLANTSSNRWLTIRL-ETLG----GVMIWLTA-TFAVLRNGNAENQAGFAS 1170 (1495)
T ss_pred HHhcCCc---HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH----HHHHHHHH-HHHHHccccccccccchH
Confidence 7888874 222 3344555544332211 223322211 1111 01111111 111111111000 00001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeE
Q 000647 1027 ELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLD 1106 (1374)
Q Consensus 1027 ~~~~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~ 1106 (1374)
.++.+ .....+....+..+.....++.....+++||.++.+.+++.+. ......+++.||. +|.|+|+||+
T Consensus 1171 ~~g~~----~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~--~~~~~~~~~~~p~---~g~I~f~nVs 1241 (1495)
T PLN03232 1171 TMGLL----LSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATA--IIENNRPVSGWPS---RGSIKFEDVH 1241 (1495)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--cccCCCCCCCCCC---CCcEEEEEEE
Confidence 11111 1122222333444555555566667889999999865332211 0011123456776 6899999999
Q ss_pred EeCC-CcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCC
Q 000647 1107 IITP-SQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYT 1183 (1374)
Q Consensus 1107 ~~yp-~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~L 1183 (1374)
|+|+ +.++||+|+||+|+||||||||||||||||||+++|+|+|+|++|+|.+||+||+++ +.+|++|++|||||+|
T Consensus 1242 f~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~L 1321 (1495)
T PLN03232 1242 LRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVL 1321 (1495)
T ss_pred EEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCee
Confidence 9885 457899999999999999999999999999999999999999999999999999998 5789999999999999
Q ss_pred CCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhh
Q 000647 1184 CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQ 1262 (1374)
Q Consensus 1184 f~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQ 1262 (1374)
|+|||||||++.. +.+|++++++++.++++++++++|+||||.+ +.|.+|||||||
T Consensus 1322 F~gTIr~NL~~~~-----------------------~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQ 1378 (1495)
T PLN03232 1322 FSGTVRFNIDPFS-----------------------EHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQ 1378 (1495)
T ss_pred eCccHHHHcCCCC-----------------------CCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHH
Confidence 9999999998532 2457889999999999999999999999997 478999999999
Q ss_pred hhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCce
Q 000647 1263 RLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGIT 1340 (1374)
Q Consensus 1263 rlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~T 1340 (1374)
|||| ||||+|+||||||||||||||.++|+.+++.+++ .++|
T Consensus 1379 rlaL------------------------------------ARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~T 1422 (1495)
T PLN03232 1379 LLSL------------------------------------ARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCT 1422 (1495)
T ss_pred HHHH------------------------------------HHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 9999 9999999999999999999999999999998765 5899
Q ss_pred EEEecCCCCchhhccceEEEEcC
Q 000647 1341 FVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1341 vI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
+|+||||++++...|+++.|.+|
T Consensus 1423 vI~IAHRl~ti~~~DrIlVL~~G 1445 (1495)
T PLN03232 1423 MLVIAHRLNTIIDCDKILVLSSG 1445 (1495)
T ss_pred EEEEeCCHHHHHhCCEEEEEECC
Confidence 99999999999999999999654
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=6.5e-106 Score=1096.83 Aligned_cols=1110 Identities=16% Similarity=0.168 Sum_probs=665.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLI-SE-NILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIH 184 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l-~~-~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~ 184 (1374)
++..+++.++.+.++...|.+.+.+++.+.+.+.+.....+ +. .++..++.+++.....|...+++.+.|..+...+.
T Consensus 319 ~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy 398 (1522)
T TIGR00957 319 FLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVY 398 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445567788888889999999999877654333221111 11 11111122233333455677788887777766665
Q ss_pred HHHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHH
Q 000647 185 TRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWI-LAYVLGAG 262 (1374)
Q Consensus 185 ~~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~-l~~~~~~~ 262 (1374)
++-+ ..+....++ ..++..++++.|++++.+.. ..+..+...++.+++..+.+ +...+...++ ++.+++..
T Consensus 399 ~K~L----~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll--~~~~g~~~l~~l~~~~~~~ 471 (1522)
T TIGR00957 399 RKAL----VITNSARKSSTVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFL--WLNLGPSVLAGVAVMVLMV 471 (1522)
T ss_pred HHHH----hCChhhcCCCCHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHH
Confidence 5544 444444433 34588899999999987744 33333333333333333323 2223322222 12222222
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 263 TMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLL 342 (1374)
Q Consensus 263 ~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (1374)
.+..++++.+.+...+..+...+.-.....+.++++.||+|++|+...+++++..++..+..++.. +...+..+..
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~----~~~~~~~~~~ 547 (1522)
T TIGR00957 472 PLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSA----YLHAVGTFTW 547 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 223345555555544444444444456667777889999999999998877776665554333221 1111111111
Q ss_pred HHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000647 343 KYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRE 422 (1374)
Q Consensus 343 ~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~ 422 (1374)
+....+..++....|.. .....+++....+..+ .++..+..++..+......+.+...+.+|+.++++.+++
T Consensus 548 -~~~~~~~~~~~f~~~~~---~~~~~~l~~~~~f~~l----~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~ 619 (1522)
T TIGR00957 548 -VCTPFLVALITFAVYVT---VDENNILDAEKAFVSL----ALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEEL 619 (1522)
T ss_pred -HHHHHHHHHHHHHHHHH---hcCCCCcCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 11111111111111110 0001122222222221 222234456777777888899999999999999875433
Q ss_pred ccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccE
Q 000647 423 LSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGH 501 (1374)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~ 501 (1374)
... . ... . .....+.+.++++|++|.|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+
T Consensus 620 ~~~-~--~~~-~-~~~~~~~~~i~~~~~~~~~~~~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~ 694 (1522)
T TIGR00957 620 EPD-S--IER-R-TIKPGEGNSITVHNATFTWARDLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGH 694 (1522)
T ss_pred ccc-c--ccc-c-ccCCCCCCcEEEEEeEEEcCCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcE
Confidence 210 0 000 0 0000112369999999999753 67999999999999999999999999999999999999999999
Q ss_pred EEeCCCCccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCC
Q 000647 502 IAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDE 578 (1374)
Q Consensus 502 I~~~g~~~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~ 578 (1374)
|.++| +|+||||+|+++++|++|||.++.. .+++++.++++.|++.++++.+|.++++ +.|.+
T Consensus 695 i~~~g-------~i~yv~Q~~~l~~~Ti~eNI~~g~~-------~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~ 760 (1522)
T TIGR00957 695 VHMKG-------SVAYVPQQAWIQNDSLRENILFGKA-------LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVN 760 (1522)
T ss_pred EEECC-------EEEEEcCCccccCCcHHHHhhcCCc-------cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCC
Confidence 99986 6999999999999999999999853 2456778899999999999998876654 45789
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh-----cCCEEEEEccChhhHhhccEEEEecCCCce
Q 000647 579 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA-----MGTSCITISHRPALVAFHDVVLSLDGEGEW 653 (1374)
Q Consensus 579 LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~-----~~~TiI~vtH~~~~~~~~d~il~l~~~g~~ 653 (1374)
||||||||++||||++++|+++|||||||+||+++++++++.+.+ .++|+|+|||+++.+..+|+|++|++ |..
T Consensus 761 LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~-G~i 839 (1522)
T TIGR00957 761 LSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSG-GKI 839 (1522)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecC-CeE
Confidence 999999999999999999999999999999999999999988742 47899999999999999999999985 332
Q ss_pred EEeccCCCcccccccc-cc-ccc--cccccc-h-hh-------hHHHHHh-hh----hc---ccC--cccCCCCCCcchh
Q 000647 654 RVHDKRDGSSVVTKSG-IN-MIK--SSETDR-Q-SD-------AMAVEQA-FV----TA---KKD--SAFSNPKAQSYVS 710 (1374)
Q Consensus 654 ~~~~~~~~~~~~~~~~-~~-~~~--~~~~~~-~-~~-------~~~~~~~-~~----~~---~~~--~~~~~~~~~~~~~ 710 (1374)
.+. ++.+......+ +. ... ..+++. . .+ ....... .+ .. ..+ .............
T Consensus 840 -~~~-g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1522)
T TIGR00957 840 -SEM-GSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQ 917 (1522)
T ss_pred -Eee-CCHHHHHhcchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhccccccccccc
Confidence 221 11111111000 00 000 000000 0 00 0000000 00 00 000 0000000000000
Q ss_pred hhhh-cCCCCCCCCC----CCcCCCCcCCCCcchHHHH-hhHhhhccccccc--hhhHHHHHHHHHHHHHHHHHHHHhhh
Q 000647 711 EVIA-ASPIADHNVP----LPVFPQLKSAPRILPLRVA-DMFKVLVPTVFDK--QGAQLLAVAFLVVSRTWISDRIASLN 782 (1374)
Q Consensus 711 ~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~ 782 (1374)
.... ..+..+.... ........+..+...+... .+++.. ...... ....+.......+..+|++.|.....
T Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~ 996 (1522)
T TIGR00957 918 SRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAI-GLFITFLSIFLFVCNHVSALASNYWLSLWTDDPM 996 (1522)
T ss_pred cccccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 0000 0000000000 0000000011111111111 111110 000000 00001111222345567776654211
Q ss_pred chHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCc
Q 000647 783 GTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDAD 861 (1374)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~ 861 (1374)
. ..+......+++++++.+++..++.....++..+.+.++..++|+++++++++.+ .||+..+. .++.
T Consensus 997 ~-------~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~----G~il 1065 (1522)
T TIGR00957 997 V-------NGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPS----GNLV 1065 (1522)
T ss_pred c-------cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCCh----HHHH
Confidence 0 0000001112333433334444444444555667778888999999999999975 78875432 3578
Q ss_pred cchHHHHHHHHHHHHHHHHHhhHh-------HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHH
Q 000647 862 QRITHDLEKLTTDLSGLVTGMVKP-------SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQ 934 (1374)
Q Consensus 862 ~ri~~D~~~l~~~l~~~~~~~~~~-------~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1374)
+|+++|++.++..++..+..++.. ++.+++..|.+..+. +++++++.++...+.+. ..+.+
T Consensus 1066 nR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--------~r~~~ 1133 (1522)
T TIGR00957 1066 NRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII----PPLGLLYFFVQRFYVAS--------SRQLK 1133 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH--------HHHHH
Confidence 999999999987766544333322 122223333322221 11122222222222221 12222
Q ss_pred hhhh-----hhhHHHHHHHHhHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHH-----HHHHHHhhhHHHHHHhhhhhHHH
Q 000647 935 QLEG-----TFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLL-----LKKKWLFGILDDFVTKQLPHNVT 1004 (1374)
Q Consensus 935 ~le~-----~~r~~~~~l~~~aesIa~~~g~~~e~~~~~~~~~~ll~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1374)
+++. .+....|.+. ..++|+.|+. |+. +.+++.+.++..... ...+|+...++ ++... +.
T Consensus 1134 ~~~~~~~s~l~~~~~E~l~-Gi~tIraf~~---~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~ 1203 (1522)
T TIGR00957 1134 RLESVSRSPVYSHFNETLL-GVSVIRAFEE---QER-FIHQSDLKVDENQKAYYPSIVANRWLAVRLE-CVGNC----IV 1203 (1522)
T ss_pred HHHHHHhhHHHHHHHHHhC-CcHHHHHhhh---HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH----HH
Confidence 2221 1222333332 4567777873 333 345556665543322 23344433222 21110 11
Q ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q 000647 1005 WGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEIS 1084 (1374)
Q Consensus 1005 ~~l~l~~~~~~~~~~~~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~ 1084 (1374)
..+ ..+.....+. .+.|.++.++.+. .+....+..+......+.....+++|+.++.+.+++.+. ..+.
T Consensus 1204 ~~~-~~~~v~~~~~----~~~g~l~~~l~~~----~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~--~~~~ 1272 (1522)
T TIGR00957 1204 LFA-ALFAVISRHS----LSAGLVGLSVSYS----LQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPW--QIQE 1272 (1522)
T ss_pred HHH-HHHHHHhcCC----CCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc--cccC
Confidence 111 1111111111 1234443333222 233345556666667777778899999999855332110 0111
Q ss_pred CCCCCCCCCCCCCCCEEEeeeEEeCCC-cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCc
Q 000647 1085 GSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQH 1163 (1374)
Q Consensus 1085 ~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~d 1163 (1374)
..++..||. +|.|+|+||+|+||+ .++||+|+||+|+||||||||||||||||||+++|+|+|||.+|+|.+||+|
T Consensus 1273 ~~~~~~wp~---~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1273 TAPPSGWPP---RGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLN 1349 (1522)
T ss_pred CCCCCCCCC---CCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEE
Confidence 234557886 799999999999876 4689999999999999999999999999999999999999999999999999
Q ss_pred cccc--cCCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhh
Q 000647 1164 IDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLER 1241 (1374)
Q Consensus 1164 I~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~ 1241 (1374)
|+++ +.+|++|++|||||+||+||||+||+ |.+ +.+|++++++++.+++++++++
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLd-p~~----------------------~~sdeei~~al~~a~l~~~I~~ 1406 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSGSLRMNLD-PFS----------------------QYSDEEVWWALELAHLKTFVSA 1406 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCccHHHHcC-ccc----------------------CCCHHHHHHHHHHcCcHHHHhh
Confidence 9998 58899999999999999999999997 432 2467889999999999999999
Q ss_pred hccCCcccc-ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCC
Q 000647 1242 EEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTN 1320 (1374)
Q Consensus 1242 ~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTS 1320 (1374)
+|+||||.+ +.|.+||||||||||| ||||+|+|||||||||||
T Consensus 1407 lp~GLdt~v~e~G~~LSgGQrQrl~L------------------------------------ARALLr~~~ILiLDEaTS 1450 (1522)
T TIGR00957 1407 LPDKLDHECAEGGENLSVGQRQLVCL------------------------------------ARALLRKTKILVLDEATA 1450 (1522)
T ss_pred CccCCCceecCCCCcCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEECCcc
Confidence 999999998 4689999999999999 999999999999999999
Q ss_pred CCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1321 ATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1321 aLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
|||.++|+.+++.+++ .++|+|+||||++++...|+++.|.+|+
T Consensus 1451 alD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~ 1496 (1522)
T TIGR00957 1451 AVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGE 1496 (1522)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 9999999999998764 5999999999999999999999996553
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=4.9e-101 Score=1045.34 Aligned_cols=1121 Identities=16% Similarity=0.161 Sum_probs=638.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENI---LLCFLLSTMHSTSKYITGTLSLQFRKIVTKLI 183 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~---~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l 183 (1374)
+++.+++.++...+.+..|.+.+.+++.+...+.. ....++..+ +..++.+++.....|+..+++.++|..+...+
T Consensus 246 ~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~-~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~~i 324 (1560)
T PTZ00243 246 VWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNAT-WGRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNALI 324 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888899999999999999987554432 111111111 11122233444566888899999999888888
Q ss_pred HHHHhhcccccccccc---CCCCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 000647 184 HTRYFENMAYYKISHV---DGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLG 260 (1374)
Q Consensus 184 ~~~yl~~~~~y~~~~~---d~~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~ 260 (1374)
.++.+.-. .... +...++....++.|++++.+....+ ..+...++..++..+.|+...++.. ++.++.+++
T Consensus 325 f~K~l~ls----~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~-~~l~~~Pl~li~~~~lL~~~lG~~a-l~gv~vl~v 398 (1560)
T PTZ00243 325 FEKCFTIS----SKSLAQPDMNTGRIINMMSTDVERINSFMQYC-MYLWSSPMVLLLSILLLSRLVGWCA-LMAVAVLLV 398 (1560)
T ss_pred HHHHHhCC----hhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHH
Confidence 87766421 1111 1234567789999999988776443 2333333333333333332223211 111111122
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 261 AGTMMRNFSPAFGKLMSKEQQLEGEYR-QLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQD 339 (1374)
Q Consensus 261 ~~~i~~~~~~~l~~l~~~~q~~e~~~r-~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~ 339 (1374)
...+..++++...+...+..+. .|-| .....+..+++.||+|++|+...+++++.-++..+..++...... +..
T Consensus 399 ~~pl~~~~~k~~~~~~~~~~~~-~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~----~~~ 473 (1560)
T PTZ00243 399 TLPLNGAIMKHQMAARRKIAKA-ADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARV----ATS 473 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH
Confidence 2222333444444333222222 2222 355666678888999999999998877766555554433222211 111
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000647 340 FLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVI 419 (1374)
Q Consensus 340 ~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~ 419 (1374)
++.......+.. +.+..|. +..+..+.+. ++..+ .++..+..++..+......+.+...+.+||.++++.
T Consensus 474 ~~~~~~p~l~~~-~~f~~y~---~~g~~Lt~~~--vft~l----aL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~ 543 (1560)
T PTZ00243 474 FVNNATPTLMIA-VVFTVYY---LLGHELTPEV--VFPTI----ALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLEC 543 (1560)
T ss_pred HHHHHHHHHHHH-HHHHHHH---HhCCCCCHHH--HHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111111111111 1111111 0111223332 22221 222233345556666677778888889999998865
Q ss_pred cccc-----cccC-------CCC--C-----CC---------C-C-----------------------CCccCCCCcEEE
Q 000647 420 SREL-----SIED-------KSP--Q-----RN---------G-S-----------------------RNYFSEANYIEF 447 (1374)
Q Consensus 420 ~~~~-----~~~~-------~~~--~-----~~---------~-~-----------------------~~~~~~~~~i~~ 447 (1374)
++.. +..+ ... . .+ . + .......+.+.+
T Consensus 544 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (1560)
T PTZ00243 544 DNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVV 623 (1560)
T ss_pred ccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccc
Confidence 4310 0000 000 0 00 0 0 000001124556
Q ss_pred eeeEEEcC---------------------------------------CCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHH
Q 000647 448 SGVKVVTP---------------------------------------TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLF 488 (1374)
Q Consensus 448 ~~v~~~~~---------------------------------------~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl 488 (1374)
+|+++.+| +++++|+|+||+|++|++++|+||||||||||+
T Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL 703 (1560)
T PTZ00243 624 EDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLL 703 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHH
Confidence 66655421 235689999999999999999999999999999
Q ss_pred HHHCCCCcCCccEEEeCCCCccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCC
Q 000647 489 RVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYP 568 (1374)
Q Consensus 489 ~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~ 568 (1374)
++|+|+++|++|+|.++ ++|+|+||+|+++++|++|||.++.. .+.+++.++++.+++++.++.+|
T Consensus 704 ~~i~G~~~~~~G~i~~~-------~~i~yv~Q~~~l~~~Tv~enI~~~~~-------~~~~~~~~~~~~~~l~~~l~~l~ 769 (1560)
T PTZ00243 704 QSLLSQFEISEGRVWAE-------RSIAYVPQQAWIMNATVRGNILFFDE-------EDAARLADAVRVSQLEADLAQLG 769 (1560)
T ss_pred HHHhcCCCCCCcEEEEC-------CeEEEEeCCCccCCCcHHHHHHcCCh-------hhHHHHHHHHHHhhhHHHHHHhh
Confidence 99999999999999874 47999999999999999999998642 23456778899999999999987
Q ss_pred CCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHH---hcCCEEEEEccChhhHhhcc
Q 000647 569 PEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVAFHD 642 (1374)
Q Consensus 569 ~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~---~~~~TiI~vtH~~~~~~~~d 642 (1374)
.+..+ +.+.+||||||||++||||++++|+++|||||||+||+++.+++++.+. ..|+|+|+|||+++.+..+|
T Consensus 770 ~g~~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad 849 (1560)
T PTZ00243 770 GGLETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRAD 849 (1560)
T ss_pred ccchHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCC
Confidence 66544 3478999999999999999999999999999999999999988877432 24899999999999999999
Q ss_pred EEEEecCCCceEEeccCCCccccccccccccccc-cccchhhhHHHHHhhhhcccCccc-CCCCCCcchhhhh-hcCC-C
Q 000647 643 VVLSLDGEGEWRVHDKRDGSSVVTKSGINMIKSS-ETDRQSDAMAVEQAFVTAKKDSAF-SNPKAQSYVSEVI-AASP-I 718 (1374)
Q Consensus 643 ~il~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~-~ 718 (1374)
+|++|++ |.. ... ++................ ........................ ............. .... .
T Consensus 850 ~ii~l~~-G~i-~~~-G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (1560)
T PTZ00243 850 YVVALGD-GRV-EFS-GSSADFMRTSLYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGA 926 (1560)
T ss_pred EEEEEEC-CEE-EEe-cCHHHHHhChHHHHHHHhhccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999985 332 221 111111111000000000 000000000000000000000000 0000000000000 0000 0
Q ss_pred CCCCCCCCcCCCCcCCCCcchHHHH-hhHhhhcccccc--chhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHhcCHH
Q 000647 719 ADHNVPLPVFPQLKSAPRILPLRVA-DMFKVLVPTVFD--KQGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKA 795 (1374)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1374)
..............+..+..++... .+++..-...+. .....++...+..+..+|++.|...... .+..
T Consensus 927 ~~~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~--------~~~~ 998 (1560)
T PTZ00243 927 ALDAAAGRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSFK--------LSAA 998 (1560)
T ss_pred ccccccchhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC--------CCcc
Confidence 0000000000000111122222211 111110000000 0000011111223445666666432110 0111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHH
Q 000647 796 SFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTD 874 (1374)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~ 874 (1374)
. +++++++..++..+......+...........++|..+++++++.+ .||+..+. .++.+|++.|++.++..
T Consensus 999 ~---~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~----G~ilnR~s~Di~~id~~ 1071 (1560)
T PTZ00243 999 T---YLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPL----GRILNRFSRDIDILDNT 1071 (1560)
T ss_pred c---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCc----cHHHHHHHhhHHHHHHH
Confidence 1 1222222222222222111122223333445688899999999875 78875433 35789999999999877
Q ss_pred HHHHHHHhhHh-------HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhh-----hhhH
Q 000647 875 LSGLVTGMVKP-------SVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEG-----TFRF 942 (1374)
Q Consensus 875 l~~~~~~~~~~-------~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~-----~~r~ 942 (1374)
++..+..++.. ++.+++..|.+..+. +++++++..+...+.+ ...+.++++. .+..
T Consensus 1072 l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~----i~~~~~~~~i~~~~~~--------~~r~~~r~~~~~~s~l~s~ 1139 (1560)
T PTZ00243 1072 LPMSYLYLLQCLFSICSSILVTSASQPFVLVAL----VPCGYLYYRLMQFYNS--------ANREIRRIKSVAKSPVFTL 1139 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH--------HHHHHHHHHHHhhcHHHHH
Confidence 65433333222 222222333211110 1111111111111111 1222222211 1222
Q ss_pred HHHHHHHhHHHhhhcCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhhhcccchh
Q 000647 943 MHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLL-LLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRAL 1021 (1374)
Q Consensus 943 ~~~~l~~~aesIa~~~g~~~e~~~~~~~~~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~ 1021 (1374)
..|.+ ...++|..|+.+..+.+.+.+..+...+.... ....+|+ ++...++...+. +..++..+++. ..+...
T Consensus 1140 ~~E~l-~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~-~~~~~~l~~~~~--~~~~~~~~~~~-~~~~~~- 1213 (1560)
T PTZ00243 1140 LEEAL-QGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWL-GVRVEFLSNIVV--TVIALIGVIGT-MLRATS- 1213 (1560)
T ss_pred HHHHH-cCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH--HHHHHHHHHHH-HhccCC-
Confidence 22333 24577888885443333333333333222222 2233443 332222211110 01111111111 001000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-C-------------------
Q 000647 1022 VSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGD-D------------------- 1081 (1374)
Q Consensus 1022 ~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~-~------------------- 1081 (1374)
.+.+.++.++ ....+....+..+......+.....+++||.++.+..+..+.+. .
T Consensus 1214 -~~~g~l~~~l----~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1288 (1560)
T PTZ00243 1214 -QEIGLVSLSL----TMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGT 1288 (1560)
T ss_pred -CCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccc
Confidence 0122222222 22233344555566666677777889999999986432211000 0
Q ss_pred --CccCCCCCCCCCCCCCCCEEEeeeEEeCCCc-ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEe
Q 000647 1082 --EISGSSQHKWNSTDYQDSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLT 1158 (1374)
Q Consensus 1082 --~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~ 1158 (1374)
.+...++..||.+..+|.|+|+||+|+|+++ ++||+|+||+|+||||||||||||||||||+++|+|+|+|++|+|.
T Consensus 1289 ~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~ 1368 (1560)
T PTZ00243 1289 VVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIR 1368 (1560)
T ss_pred cccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE
Confidence 0001122234433346899999999988764 6799999999999999999999999999999999999999999999
Q ss_pred cCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCc
Q 000647 1159 KPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS 1236 (1374)
Q Consensus 1159 idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~ 1236 (1374)
+||+||+++ +.+|++|++|||||+||+||||+||+ |.. +.+|++++++++.++++
T Consensus 1369 IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNId-p~~----------------------~~sdeeI~~Al~~a~l~ 1425 (1560)
T PTZ00243 1369 VNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVD-PFL----------------------EASSAEVWAALELVGLR 1425 (1560)
T ss_pred ECCEEcccCCHHHHHhcceEECCCCccccccHHHHhC-ccc----------------------CCCHHHHHHHHHHCCCh
Confidence 999999998 57899999999999999999999997 432 24578899999999999
Q ss_pred hhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCccccccccccc-CcEEE
Q 000647 1237 YLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHK-PKFGI 1314 (1374)
Q Consensus 1237 ~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~-Pkill 1314 (1374)
++++++|+||||.+ +.|.+||||||||||| ||||+++ |||||
T Consensus 1426 ~~I~~lp~Gldt~vge~G~nLSgGQrQrLaL------------------------------------ARALL~~~~~ILl 1469 (1560)
T PTZ00243 1426 ERVASESEGIDSRVLEGGSNYSVGQRQLMCM------------------------------------ARALLKKGSGFIL 1469 (1560)
T ss_pred HHHhhCcccccccccCCcCcCCHHHHHHHHH------------------------------------HHHHhcCCCCEEE
Confidence 99999999999998 4789999999999999 9999996 89999
Q ss_pred eeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1315 LDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1315 LDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
|||||||||.++|+.+++.++. .++|+|+||||++++...|+++.|.+|
T Consensus 1470 LDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G 1520 (1560)
T PTZ00243 1470 MDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHG 1520 (1560)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECC
Confidence 9999999999999999987764 589999999999999999999999654
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.1e-100 Score=1042.03 Aligned_cols=1102 Identities=17% Similarity=0.177 Sum_probs=642.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhH-HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 109 ALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPL-FFQ--LISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHT 185 (1374)
Q Consensus 109 ~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~-f~~--~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~ 185 (1374)
...++.++.+.+....|.+.+.+.+.+...+.+. ... +++..++..++.+++.....|...+++.++|..+...+.+
T Consensus 84 ~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~ 163 (1490)
T TIGR01271 84 FYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYK 163 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444456777888888999998888774322221 111 1111111112222334456677788888888888777666
Q ss_pred HHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 000647 186 RYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTM 264 (1374)
Q Consensus 186 ~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i 264 (1374)
+.++ .+...+++ ..+...++++.|++++.+....+ ..+...++.++++.+.++...++.. ++.++.+++...+
T Consensus 164 K~L~----l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~-l~~l~v~~~~~~~ 237 (1490)
T TIGR01271 164 KTLK----LSSRVLDKISTGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNG-FCGLGFLILLALF 237 (1490)
T ss_pred HHHh----CCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 5553 33333332 34678899999999998865543 2232333333333343332222221 1222222233333
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 265 MRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKY 344 (1374)
Q Consensus 265 ~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1374)
..++++.+.+...+..+.....-.....+.++++.||+|++|+.+.+++++..++..+..++..... .....+. +
T Consensus 238 ~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~----~~~~~~~-~ 312 (1490)
T TIGR01271 238 QACLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLR----YFYSSAF-F 312 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH-H
Confidence 4455555555544333333333345666777888999999999998777666655544443322211 1111111 1
Q ss_pred HHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 000647 345 LGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSL-GTLSISSRRLNRLSGYADRIHELMVISREL 423 (1374)
Q Consensus 345 ~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~ 423 (1374)
....+..++.+..|.. ....+.+. +++.+. ++..+..++ ..+......+.+...+.+||.++++.++..
T Consensus 313 ~~~~~~~~~~f~~y~~----~~~~~~~~--~ft~la----l~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~ 382 (1490)
T TIGR01271 313 FSGFFVVFLSVVPYAL----IKGIILRR--IFTTIS----YCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYK 382 (1490)
T ss_pred HHHHHHHHHHHHHHHH----hCCCcHHH--HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 1111111111111110 01112322 222221 111111222 234555667778889999999998654321
Q ss_pred cccCCCCCCCCCCCccCCCCcEEEeeeEEEcCC---------------------------------CCeeeeeeeEEEeC
Q 000647 424 SIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT---------------------------------GNVLVENLTLKVEP 470 (1374)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~---------------------------------~~~~l~~isl~i~~ 470 (1374)
.... . .....++++|++|.|+. .+++|+|+||+|++
T Consensus 383 ~~~~-----~------~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~ 451 (1490)
T TIGR01271 383 TLEY-----N------LTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEK 451 (1490)
T ss_pred cccc-----c------CCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECC
Confidence 1000 0 01123666666666532 14689999999999
Q ss_pred CCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHH
Q 000647 471 GSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGG 550 (1374)
Q Consensus 471 Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~ 550 (1374)
|++++|+||||||||||+++|+|+++|++|+|.++| +|+||||+||++++|++|||.|+... ++++
T Consensus 452 G~~~~I~G~~GsGKSTLl~~l~G~~~~~~G~i~~~g-------~iayv~Q~~~l~~~Ti~eNI~~g~~~-------~~~~ 517 (1490)
T TIGR01271 452 GQLLAVAGSTGSGKSSLLMMIMGELEPSEGKIKHSG-------RISFSPQTSWIMPGTIKDNIIFGLSY-------DEYR 517 (1490)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECC-------EEEEEeCCCccCCccHHHHHHhcccc-------chHH
Confidence 999999999999999999999999999999999987 69999999999999999999998532 3356
Q ss_pred HHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHH-Hh--c
Q 000647 551 MVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKV-RA--M 624 (1374)
Q Consensus 551 ~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l-~~--~ 624 (1374)
+.++++.|+|.+.++.+|.++.+ +.|.+|||||||||+||||++++|+++||||||||||+++++++++.+ .+ .
T Consensus 518 ~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~ 597 (1490)
T TIGR01271 518 YTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMS 597 (1490)
T ss_pred HHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhc
Confidence 77889999999999998877654 346799999999999999999999999999999999999999999853 33 4
Q ss_pred CCEEEEEccChhhHhhccEEEEecCCCceEEeccCCCcccccc-----------ccccc------------------cc-
Q 000647 625 GTSCITISHRPALVAFHDVVLSLDGEGEWRVHDKRDGSSVVTK-----------SGINM------------------IK- 674 (1374)
Q Consensus 625 ~~TiI~vtH~~~~~~~~d~il~l~~~g~~~~~~~~~~~~~~~~-----------~~~~~------------------~~- 674 (1374)
++|+|+|||+++.+..+|+|+++++ |... .... ....... ..... ..
T Consensus 598 ~~tvilvtH~~~~~~~ad~ii~l~~-g~i~-~~g~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1490)
T TIGR01271 598 NKTRILVTSKLEHLKKADKILLLHE-GVCY-FYGT-FSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDG 674 (1490)
T ss_pred CCeEEEEeCChHHHHhCCEEEEEEC-CEEE-EEcC-HHHHHhcChHHHHHHhcccccccccccccccccccccccccccc
Confidence 8999999999999999999999985 3322 1110 0000000 00000 00
Q ss_pred -c-----ccc-cc---h-hhh--H------------------------------HHHHhh-hhcc------cC---cccC
Q 000647 675 -S-----SET-DR---Q-SDA--M------------------------------AVEQAF-VTAK------KD---SAFS 701 (1374)
Q Consensus 675 -~-----~~~-~~---~-~~~--~------------------------------~~~~~~-~~~~------~~---~~~~ 701 (1374)
. .+. .. . .+. . ...... .... .+ ...+
T Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (1490)
T TIGR01271 675 DSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEES 754 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhcccccccccccccccccccc
Confidence 0 000 00 0 000 0 000000 0000 00 0000
Q ss_pred CCCC----------------------C--------cc----hhh--hhhc----CCCCC----C-CCC-----CCc----
Q 000647 702 NPKA----------------------Q--------SY----VSE--VIAA----SPIAD----H-NVP-----LPV---- 727 (1374)
Q Consensus 702 ~~~~----------------------~--------~~----~~~--~~~~----~~~~~----~-~~~-----~~~---- 727 (1374)
.+.. . +. ..+ .... ....+ . ..+ ...
T Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (1490)
T TIGR01271 755 LPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEE 834 (1490)
T ss_pred cccccccccccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhh
Confidence 0000 0 00 000 0000 00000 0 000 000
Q ss_pred ------CCCCcCCCCcchHHHHhhHhhhccccccc------hhhHHHHHHHHHHHHHHHHHHHHhhh----chHHHH---
Q 000647 728 ------FPQLKSAPRILPLRVADMFKVLVPTVFDK------QGAQLLAVAFLVVSRTWISDRIASLN----GTTVKY--- 788 (1374)
Q Consensus 728 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~--- 788 (1374)
.....+..+...+.+. ..++...... ....++......+..+|++.|..... ......
T Consensus 835 ~~~~~~~~~e~~~~g~v~~~vY---~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~ 911 (1490)
T TIGR01271 835 DLKECFADERENVFETTTWNTY---LRYITTNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSP 911 (1490)
T ss_pred hhhhhhhHHHHhhcCcccHHHH---HHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCc
Confidence 0000111112222211 1111111000 00011112223355677766643110 000000
Q ss_pred -----HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCcc
Q 000647 789 -----VLEQDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQ 862 (1374)
Q Consensus 789 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ 862 (1374)
....+...++ .+.+++..+.+..++.....++..+.+.+...++|.++++++++.+ .||+..+. .++.+
T Consensus 912 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~----G~iln 986 (1490)
T TIGR01271 912 DVQKPVIITPTSAYY-IFYIYVGTADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKA----GRILN 986 (1490)
T ss_pred cccccccccCcchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCh----hHHHH
Confidence 0000011111 1222222222222333334445566677788889999999999976 78875443 34789
Q ss_pred chHHHHHHHHHHHHHHHHHhhHhH-------HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHh
Q 000647 863 RITHDLEKLTTDLSGLVTGMVKPS-------VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQ 935 (1374)
Q Consensus 863 ri~~D~~~l~~~l~~~~~~~~~~~-------~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1374)
|+++|++.++..++..+..++..+ +.+.+..|.+.++. ++++++++++...+.+. ..+..+
T Consensus 987 Rfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~----~~l~~~~~~~~~~~~~~--------~r~l~~ 1054 (1490)
T TIGR01271 987 RFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAA----IPVAVIFIMLRAYFLRT--------SQQLKQ 1054 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH--------HHHHHH
Confidence 999999999887765444333222 22223333322111 11111222222122221 122222
Q ss_pred hhh-----hhhHHHHHHHHhHHHhhhcCCcHHHHHHHHHHHHHHHHHH----H-HHHHHHHHhhhHHHHHHhhhhhHHHH
Q 000647 936 LEG-----TFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHS----L-LLLKKKWLFGILDDFVTKQLPHNVTW 1005 (1374)
Q Consensus 936 le~-----~~r~~~~~l~~~aesIa~~~g~~~e~~~~~~~~~~ll~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 (1374)
++. .+....+.+. ..++|+.|+...... ++|.+.++.. . .....+|+...++. +... +..
T Consensus 1055 ~~~~~~s~l~~~~~Etl~-Gl~tIraf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~-i~~~----~~~ 1124 (1490)
T TIGR01271 1055 LESEARSPIFSHLITSLK-GLWTIRAFGRQSYFE----TLFHKALNLHTANWFLYLSTLRWFQMRIDI-IFVF----FFI 1124 (1490)
T ss_pred HHHHHhhHHHHHHHHHhc-CHHHHHHhCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH----HHH
Confidence 222 2223333332 457788888554433 4444444422 1 22334454433332 1110 011
Q ss_pred HHHH-HHHhhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--
Q 000647 1006 GLSL-LYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDE-- 1082 (1374)
Q Consensus 1006 ~l~l-~~~~~~~~~~~~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~-- 1082 (1374)
++.+ .++.... ..+.++.++.++ .+....+..+......+.....+++||.++.+.+++.+.....
T Consensus 1125 ~~~~l~~~~~~~-------~~g~~g~~l~~~----~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~ 1193 (1490)
T TIGR01271 1125 AVTFIAIGTNQD-------GEGEVGIILTLA----MNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGG 1193 (1490)
T ss_pred HHHHHHHHHhcC-------CccHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccc
Confidence 1111 1111100 112222222211 1122233344444555666678899999998654332111000
Q ss_pred ----------ccCCCCCCCCCCCCCCCEEEeeeEEeCCC-cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCC
Q 000647 1083 ----------ISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP 1151 (1374)
Q Consensus 1083 ----------~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~ 1151 (1374)
....+++.||. .|.|+|+||+|.|+. .++||+|+||+|+||||||||||||||||||+++|+|+|+
T Consensus 1194 ~~~~~~~~~~~~~~~~~~wp~---~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~ 1270 (1490)
T TIGR01271 1194 KYQLSTVLVIENPHAQKCWPS---GGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS 1270 (1490)
T ss_pred ccccccccccccCCCCCCCCC---CCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC
Confidence 01123456886 689999999998875 6899999999999999999999999999999999999998
Q ss_pred CCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHH
Q 000647 1152 VVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTI 1229 (1374)
Q Consensus 1152 ~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 1229 (1374)
.+|+|.+||+||+++ +.+|++|++|||||+||+||||+||+ |.. +..|++++++
T Consensus 1271 -~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLd-p~~----------------------~~tdeei~~a 1326 (1490)
T TIGR01271 1271 -TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLD-PYE----------------------QWSDEEIWKV 1326 (1490)
T ss_pred -CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhC-ccc----------------------CCCHHHHHHH
Confidence 799999999999988 57899999999999999999999996 432 2468889999
Q ss_pred HHhCCCchhhhhhccCCccccc-cccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccc
Q 000647 1230 LEGVRLSYLLEREEVGWDANLN-WEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFH 1308 (1374)
Q Consensus 1230 L~~v~L~~~v~~~~~Gldt~~~-~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr 1308 (1374)
|+.++|+++++.+|+||||.++ .|.+||||||||||| ||||+|
T Consensus 1327 L~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~L------------------------------------ARALLr 1370 (1490)
T TIGR01271 1327 AEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCL------------------------------------ARSILS 1370 (1490)
T ss_pred HHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHH------------------------------------HHHHhC
Confidence 9999999999999999999984 688999999999999 999999
Q ss_pred cCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1309 KPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1309 ~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
+|||||||||||+||.++++.+++.+++ .+||+|+||||++++...|+++.|.+|
T Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G 1427 (1490)
T TIGR01271 1371 KAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGS 1427 (1490)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECC
Confidence 9999999999999999999999998764 589999999999999999999999654
No 9
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=1e-91 Score=810.67 Aligned_cols=629 Identities=38% Similarity=0.617 Sum_probs=546.9
Q ss_pred HHhhhhhhhcccchhhhhhccccCCCCcccccCCCCCCCccCcc-ccccccccccccccccchHHHHHHHHHHhccccch
Q 000647 24 ILLASGILVAGGTAAYLKSRFSSKKPDAFGHYNGLGDSERKPDK-AVANRSNIKKANQKKGGLKSLQVLAAILLSEMGKM 102 (1374)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~Ll~i~~p~~~~~ 102 (1374)
+++++++..+|++++|+..+..+..++++. ++.....++..+ ....+..++|.+..+..++++++++++++|++.++
T Consensus 2 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~t~~~~~~~~~~~~~k~~~~~~f~~k~~~ilkil~p~~~~~ 79 (659)
T KOG0060|consen 2 LAITAKVCAPGLVLRHASFLLAKLYIGSFR--GNPRFRSETCMSLAGKKQGAKAKASLDKVFFQKFLQILKILFPSTFSS 79 (659)
T ss_pred CcccccccCchhHHHHHHHHHHHhhhhhcc--CCCcccccchhhccCCCCCccchhhhhHHHHHHHHHHHHHhccCcccc
Confidence 467889999999999999999999999996 443333333332 22223223445556667899999999999998876
Q ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 103 GARDLL-ALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTK 181 (1374)
Q Consensus 103 ~~~~l~-~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~ 181 (1374)
++.+++ +++++++..+..++.++.+.+.||.+++++|.+.|.+++..+++.+...+.+++..+|..+.|.++||+++|+
T Consensus 80 ~~~~l~l~~~~l~~~~~~~~y~~~~~~~~~y~al~~kd~~~F~~~~~~~~~~~~~~s~~~a~~ky~~~~L~Lr~R~~ltk 159 (659)
T KOG0060|consen 80 QTALLLLALVALTLLTTADVYMIGNIPTKFYVALINKDAELFKRLLFKYVLLIPGISLLNALLKFTTNELYLRFRKNLTK 159 (659)
T ss_pred HHHHHHHHHHHHHHHHHhHhheecccchhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHH
Confidence 665544 4666677788889999999999999999999999999999998888888899999999999999999999999
Q ss_pred HHHHHHhhccccccccccCCCCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 000647 182 LIHTRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGA 261 (1374)
Q Consensus 182 ~l~~~yl~~~~~y~~~~~d~~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~ 261 (1374)
++|+.||++.+||+++..|.++||||||+|+|+++||..+++++++++++++++++|+|+++...+|..+++++.|++++
T Consensus 160 ~lh~~Y~k~~~yYkis~~d~ridNPDQrltqDv~kf~~~l~sl~s~l~~a~~di~~Y~~~l~~s~g~~gp~~i~~Yf~~~ 239 (659)
T KOG0060|consen 160 YLHRLYFKGFTYYKLSNLDDRIDNPDQRLTQDVEKFCRQLSSLYSNLLKAPFDLVYYTFRLFESAGWLGPVSIFAYFLIG 239 (659)
T ss_pred HHHHHHhccceEEEecccccccCChHHHHhHHHHHHHHHHHHHHHhhhccceeeehhhhHHhhhcCcccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999989999999999999988
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 262 GTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFL 341 (1374)
Q Consensus 262 ~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 341 (1374)
+++.+.+.+|+++++.+||++|||||+.|+|+|.|+|+||||+|++.|..+.+++|++++++.++.+...++++++++++
T Consensus 240 ~vi~~~L~~pI~~l~~~qeklEGdfRy~h~rlr~NaE~iAFY~g~~~E~~~~~~~f~~Lv~~l~~l~~~r~~l~f~~n~~ 319 (659)
T KOG0060|consen 240 TVINKTLRGPIVKLTVEQEKLEGDFRYKHSRLRVNAEEIAFYRGGQVEHQRTDQRFRNLVQHLRELMSFRFWLGFIDNIF 319 (659)
T ss_pred HHHHhhhccchhHHHHHHHHhhcchhhheeeeeecchhhhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000647 342 LKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISR 421 (1374)
Q Consensus 342 ~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~ 421 (1374)
- |++.++++++++.|+|.|....+.. .+.+...+.....+++.++++++.++....++.++.++++||.|+++...
T Consensus 320 ~-Ylg~ilsy~vi~~p~Fs~h~y~~~s---~aEL~~~i~~na~~~i~Li~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~ 395 (659)
T KOG0060|consen 320 D-YLGGILSYVVIAIPFFSGHVYDDLS---PAELSGLISNNAFVFIYLISAFGRLVDLSRDLSRLSGYTHRIGELMEVLD 395 (659)
T ss_pred H-HHHhhheeeEEeeeeecccccCCcC---HHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHH
Confidence 6 9999999999999999987543333 23455555566778888899999999999999999999999999987665
Q ss_pred cccccCC-----------C----CCCCCCCCccCCCCcEEEeeeEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCchh
Q 000647 422 ELSIEDK-----------S----PQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKS 485 (1374)
Q Consensus 422 ~~~~~~~-----------~----~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~isl~i~~Ge~~~IvG~sGsGKS 485 (1374)
+...... . ....+.+...+.++.|++++|++..|+ +..+++|+||+|+.|+.++|+||||||||
T Consensus 396 d~~~~~~~~~~~~~~~~E~~~~l~~~~G~~~~~~~Dn~i~~e~v~l~tPt~g~~lie~Ls~~V~~g~~LLItG~sG~GKt 475 (659)
T KOG0060|consen 396 DLSSGSQECTMEEEELGEAEWGLSLPPGSGKAEPADNAIEFEEVSLSTPTNGDLLIENLSLEVPSGQNLLITGPSGCGKT 475 (659)
T ss_pred HhccCCcchhhhhhhhhhhhhccCCCCCCcccccccceEEeeeeeecCCCCCceeeeeeeeEecCCCeEEEECCCCCchh
Confidence 4432110 0 001111222344678999999999998 67788999999999999999999999999
Q ss_pred HHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCCCCcCCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCChhHH
Q 000647 486 SLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLL 564 (1374)
Q Consensus 486 TLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~L~~~~ 564 (1374)
+|+|+++|+||..+|++..+.... .+.+.||||+||+..||+||++.||....+ +.+..+|+++.+.|+.++|.+++
T Consensus 476 SLlRvlggLWp~~~G~l~k~~~~~--~~~lfflPQrPYmt~GTLRdQvIYP~~~~~~~~~~~~d~~i~r~Le~v~L~hl~ 553 (659)
T KOG0060|consen 476 SLLRVLGGLWPSTGGKLTKPTDGG--PKDLFFLPQRPYMTLGTLRDQVIYPLKAEDMDSKSASDEDILRILENVQLGHLL 553 (659)
T ss_pred HHHHHHhcccccCCCeEEecccCC--CCceEEecCCCCccccchhheeeccCccccccccCCCHHHHHHHHHHhhhhhHH
Confidence 999999999999999999875421 256999999999999999999999965433 23457889999999999999999
Q ss_pred hcCC-CC--ccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhcCCEEEEEccChhhHhhc
Q 000647 565 DRYP-PE--KEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFH 641 (1374)
Q Consensus 565 ~~~~-~~--~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~~~TiI~vtH~~~~~~~~ 641 (1374)
++.. .+ .+.+|.+.||+|||||+|+||.+|++|++.||||+|||+|.+.|..+++.+++.|+|.|.|+||.++.++|
T Consensus 554 ~r~ggld~~~~~dW~dvLS~GEqQRLa~ARLfy~kPk~AiLDE~TSAv~~dvE~~~Yr~~r~~giT~iSVgHRkSL~kfH 633 (659)
T KOG0060|consen 554 EREGGLDQQVDWDWMDVLSPGEQQRLAFARLFYHKPKFAILDECTSAVTEDVEGALYRKCREMGITFISVGHRKSLWKFH 633 (659)
T ss_pred HHhCCCCchhhccHHhhcCHHHHHHHHHHHHHhcCCceEEeechhhhccHHHHHHHHHHHHHcCCeEEEeccHHHHHhhh
Confidence 9974 34 34489999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCCceEEeccCC
Q 000647 642 DVVLSLDGEGEWRVHDKRD 660 (1374)
Q Consensus 642 d~il~l~~~g~~~~~~~~~ 660 (1374)
|.++.|+++|+|.+++..+
T Consensus 634 d~~L~~~g~g~w~~~~I~~ 652 (659)
T KOG0060|consen 634 DYVLRMDGRGSWRFHQIDD 652 (659)
T ss_pred hEEEEecCCCceEEEEech
Confidence 9999999999999987654
No 10
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=4e-78 Score=723.31 Aligned_cols=547 Identities=28% Similarity=0.479 Sum_probs=467.0
Q ss_pred chHHHHHHHHHHhccccchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHH
Q 000647 84 GLKSLQVLAAILLSEMGKMGA-RDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHS 162 (1374)
Q Consensus 84 ~~~~l~~Ll~i~~p~~~~~~~-~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~ 162 (1374)
-+++++.+.+-..-+.++++. .++++++++.++.+..+++++.|++.||++|..+|...|++.+..|.+++.+...+++
T Consensus 25 ~~~qfw~i~r~yw~~~~~~~~~~l~~~i~~~~l~~v~~~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v 104 (604)
T COG4178 25 LGRQFWMIARAYWASPVRKRAWLLLIGILALILLSVRGQVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNV 104 (604)
T ss_pred HHHHHHHHhhhhccCccchHHHHHHHHHHHHHHHHhheeeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666655443333333343 4344456667788888999999999999999999999999999988888888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccC--CCCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 163 TSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVD--GRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTW 240 (1374)
Q Consensus 163 ~~~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d--~~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~ 240 (1374)
...|+++++.++||+|||+++.++||++..||++.+.+ ..+|||||||++|+..|++..+++..+++.++++.+.|+.
T Consensus 105 ~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~ 184 (604)
T COG4178 105 AQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTG 184 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887 5579999999999999999999999999999999888876
Q ss_pred HHH-------------HhhhhhHHHHH-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCh
Q 000647 241 RLC-------------SYASPKYVFWI-LAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGE 306 (1374)
Q Consensus 241 ~l~-------------~~~~~~l~~~~-l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge 306 (1374)
.|+ .+.+|++++|+ ++|++.++++++++||++.+++.+++++||+||+.+.|+++|+|+||+|+||
T Consensus 185 iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE 264 (604)
T COG4178 185 ILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGE 264 (604)
T ss_pred HHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCc
Confidence 554 24678999887 5677777777889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHH
Q 000647 307 NKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVI 386 (1374)
Q Consensus 307 ~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~ 386 (1374)
+.|+++++++|..++++++++..+...+..++..+. ++...+++++.+|.||.|.+ ++|..++ ..+.|
T Consensus 265 ~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~-~~s~v~P~li~ap~~f~g~i-----~~G~lmq------a~~aF 332 (604)
T COG4178 265 KVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYG-WLSVVLPILIAAPRYFSGQI-----TFGGLMQ------AVGAF 332 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhh-HHHHHHHHHhccHhhhcCcC-----hHHHHHH------HHHHH
Confidence 999999999999999999999999998888888775 45567778888888998877 5665432 23456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCC--CCcEEEeeeEEEcCCCCeeeeee
Q 000647 387 ISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSE--ANYIEFSGVKVVTPTGNVLVENL 464 (1374)
Q Consensus 387 ~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~v~~~~~~~~~~l~~i 464 (1374)
..+..+++.+...+.++..+++...|+.++.+..+....+..............+ ...|+++|+++..|++++.++++
T Consensus 333 ~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~~~ll~~l 412 (604)
T COG4178 333 GQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDGQTLLSEL 412 (604)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCCCeeeccc
Confidence 7777899999999999999999999999987654422111111111000000111 46799999999999999999999
Q ss_pred eEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccC
Q 000647 465 TLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE 544 (1374)
Q Consensus 465 sl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~ 544 (1374)
||++++||.+.|.||||||||||+|+|+|+||..+|+|..|.. .++.|+||+||++.||+||.|+||....
T Consensus 413 ~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~-----~~~lflpQ~PY~p~GtLre~l~YP~~~~---- 483 (604)
T COG4178 413 NFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPAD-----SALLFLPQRPYLPQGTLREALCYPNAAP---- 483 (604)
T ss_pred eeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCC-----CceEEecCCCCCCCccHHHHHhCCCCCC----
Confidence 9999999999999999999999999999999999999999842 4699999999999999999999997653
Q ss_pred CCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh-
Q 000647 545 PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA- 623 (1374)
Q Consensus 545 ~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~- 623 (1374)
..+|+++.++|.+|+|+++.+++ +.+.+|...||+|||||||+||+++++|++++|||+|||||++++..+++.+++
T Consensus 484 ~~~d~~l~~vL~~vgL~~L~~rl--~~~~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~ 561 (604)
T COG4178 484 DFSDAELVAVLHKVGLGDLAERL--DEEDRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEE 561 (604)
T ss_pred CCChHHHHHHHHHcCcHHHHHHH--hccCcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhh
Confidence 36889999999999999999994 455679999999999999999999999999999999999999999999999998
Q ss_pred -cCCEEEEEccChhhHhhccEEEEecCCCce
Q 000647 624 -MGTSCITISHRPALVAFHDVVLSLDGEGEW 653 (1374)
Q Consensus 624 -~~~TiI~vtH~~~~~~~~d~il~l~~~g~~ 653 (1374)
.+.|+|.|+||..+..+|++.+.+.+++++
T Consensus 562 lp~~tvISV~Hr~tl~~~h~~~l~l~~~~~~ 592 (604)
T COG4178 562 LPDATVISVGHRPTLWNFHSRQLELLDDAGG 592 (604)
T ss_pred CCCCEEEEeccchhhHHHHhhheeecccccc
Confidence 799999999999999999999999876654
No 11
>KOG0064 consensus Peroxisomal long-chain acyl-CoA transporter, ABC superfamily [Lipid transport and metabolism]
Probab=100.00 E-value=4e-79 Score=693.61 Aligned_cols=569 Identities=34% Similarity=0.585 Sum_probs=492.8
Q ss_pred chHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 000647 84 GLKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHST 163 (1374)
Q Consensus 84 ~~~~l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~ 163 (1374)
.++++..|++|++|...|+|+.++.+..++++.||++|++++.+.|+++..++.++...|...++.|++++++++++|++
T Consensus 97 f~k~l~~L~Kilip~vfc~e~gll~~hs~~Li~RTfLSl~VA~LdGqlVk~Ivrk~~r~F~~~LlkW~liaiPAtFvNS~ 176 (728)
T KOG0064|consen 97 FLKRLNVLSKILIPTVFCKETGLLTAQSFFLISRTFLSLFVAKLDGQLVKNIVRKRGRQFLWDLLKWFLIAIPASFVNSA 176 (728)
T ss_pred HHHHHHHHHHHhcchHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHhhhccHHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 164 SKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLC 243 (1374)
Q Consensus 164 ~~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 243 (1374)
.+|++..+++.+|.+++++..+.||++.+||++++.|+++.||||++|+||..|++.++.+++++.++++|.+++++.|.
T Consensus 177 Iryle~klaLafrtrL~~h~y~~Y~snqTyY~Vsn~d~~i~n~D~sLTeDI~~Fs~svahLysnLtKP~lDl~l~s~~L~ 256 (728)
T KOG0064|consen 177 IRYLESKLALAFRTRLTRHAYDMYLSNQTFYKVSNLDSVIENADNSLTEDIAKFSDSVAHLYSNLTKPVLDLILISFTLL 256 (728)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEecccchhcCccchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888775
Q ss_pred Hhh---hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHH
Q 000647 244 SYA---SPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKAL 320 (1374)
Q Consensus 244 ~~~---~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~ 320 (1374)
... .......+.+.+.+.+.+++.++|+|+++..++..++|.+|+.|+++.+|+|+||||+|.+.|.+.+++.|+.+
T Consensus 257 ~s~~s~g~~~~~~~~lvv~lTa~iLr~~sP~Fg~Lv~eeA~r~g~lr~~Hs~ii~NsEEIAfy~GhkvE~~ql~~sy~~L 336 (728)
T KOG0064|consen 257 DSATSVGAAGITLAGLVVYLTAFILRAVSPKFGKLVAEEAARKGYLRYLHSNIITNSEEIAFYGGHKVELTQVDESYNRL 336 (728)
T ss_pred hhhccccccchhhhhhHHHHHHHHHHHhCCchhhHHHHHHhhccHHHHHHHHHhccHHHHHhhcccHHHHHHHHHHHHHH
Confidence 321 11111122222335667789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCC-c---cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 321 TRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPD-T---STLGRAKMLSNLRYHTSVIISLFQSLGTL 396 (1374)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~-~---~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 396 (1374)
...+..+.+.+.|+.+...|+++|.++..+++++..|++.+....+ . ...|.. ....+...-..+++..+++..+
T Consensus 337 ~~qm~li~k~r~~YiMleqF~mKYvWsg~GlvmvsiPI~~~t~~s~~~~~~~e~~~s-rt~~f~t~r~LL~saAdAieRl 415 (728)
T KOG0064|consen 337 VEQMNLIFKVRLWYIMLEQFVMKYTWSGTGLVMVSIPILTSTLASEGTLQLSEEGNS-RTKEFITNRRLLLSAADAIERL 415 (728)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeeeecccCCCCcccccccchh-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988776554222 1 112221 1112223345677888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccCC-C---CCCC--------CCCC------ccCCCCcEEEeeeEEEcCCCC
Q 000647 397 SISSRRLNRLSGYADRIHELMVISRELSIEDK-S---PQRN--------GSRN------YFSEANYIEFSGVKVVTPTGN 458 (1374)
Q Consensus 397 ~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~-~---~~~~--------~~~~------~~~~~~~i~~~~v~~~~~~~~ 458 (1374)
+.+++.+.+++|+..|++++++..++...... . .... .... .......|.++|+.+..|+++
T Consensus 416 MssyKeItqLaGyt~Rv~~mf~v~~dv~~g~~~k~~v~e~~~~~~~~e~r~s~~l~~~~~i~~~~gI~lenIpvItP~~~ 495 (728)
T KOG0064|consen 416 MSSYKEITQLAGYTNRVFTMFSVLHDVHKGNYNKTAVPEILSSRTIDESRNSNPLPTTDAIRNFNGIILENIPVITPAGD 495 (728)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhcccccccccCchhhccCccccccCCcCCccchhhcccceEEecCceeccCcc
Confidence 99999999999999999988766544322110 0 0000 0000 011235699999999999999
Q ss_pred eeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCCCCcCCHHHHhcCCCC
Q 000647 459 VLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLT 538 (1374)
Q Consensus 459 ~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~ 538 (1374)
.++..++|+|++|-+++|+||||||||+|+|+|.|+||...|...+|. +.+|.|+||+||+-.||+||+|.||..
T Consensus 496 vvv~~Ltf~i~~G~hLLItGPNGCGKSSLfRILggLWPvy~g~L~~P~-----~~~mFYIPQRPYms~gtlRDQIIYPdS 570 (728)
T KOG0064|consen 496 VLVPKLTFQIEPGMHLLITGPNGCGKSSLFRILGGLWPVYNGLLSIPR-----PNNIFYIPQRPYMSGGTLRDQIIYPDS 570 (728)
T ss_pred eeecceeEEecCCceEEEECCCCccHHHHHHHHhccCcccCCeeecCC-----CcceEeccCCCccCcCcccceeecCCc
Confidence 999999999999999999999999999999999999999999999885 347999999999999999999999987
Q ss_pred CCccc-CCCCHHHHHHHHHHcCChhHHhcCC-CCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHH
Q 000647 539 SDQEV-EPLTHGGMVELLKNVDLEYLLDRYP-PEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEER 616 (1374)
Q Consensus 539 ~~~~~-~~~~~~~~~~~l~~~~L~~~~~~~~-~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~ 616 (1374)
.++.. ....|.++..+|+.+.|++.+++.. ++...+|.+.||||||||+++||.+||+|+..+|||||||+..+.|..
T Consensus 571 ~e~~~~kg~~d~dL~~iL~~v~L~~i~qr~~g~da~~dWkd~LsgGekQR~~mARm~yHrPkyalLDEcTsAvsidvE~~ 650 (728)
T KOG0064|consen 571 SEQMKRKGYTDQDLEAILDIVHLEHILQREGGWDAVRDWKDVLSGGEKQRMGMARMFYHRPKYALLDECTSAVSIDVEGK 650 (728)
T ss_pred HHHHHhcCCCHHHHHHHHHHhhHHHHHHhccChhhhccHHhhccchHHHHHHHHHHHhcCcchhhhhhhhcccccchHHH
Confidence 65442 4578899999999999999999864 455568999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEEccChhhHhhccEEEEecCCCceEEecc
Q 000647 617 FCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGEWRVHDK 658 (1374)
Q Consensus 617 i~~~l~~~~~TiI~vtH~~~~~~~~d~il~l~~~g~~~~~~~ 658 (1374)
+++..+..|.+.|.||||++++++|.+.+..|++|+|.+..-
T Consensus 651 i~~~ak~~gi~llsithrpslwk~h~~ll~~dg~g~~q~~~l 692 (728)
T KOG0064|consen 651 IFQAAKDAGISLLSITHRPSLWKYHTHLLEFDGEGGWQFRAL 692 (728)
T ss_pred HHHHHHhcCceEEEeecCccHHHHHHHHHhccCCCCeeeccC
Confidence 999999999999999999999999999999999999987643
No 12
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=9.1e-78 Score=694.85 Aligned_cols=574 Identities=36% Similarity=0.601 Sum_probs=477.1
Q ss_pred chHHHHhhHhhhccccccchhhHHHHHHHHHHH-HHHHHHHHHhhhchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 738 LPLRVADMFKVLVPTVFDKQGAQLLAVAFLVVS-RTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAP 816 (1374)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1374)
.+.++.+++++++|..+.++.++++.+.+.... .+..+..+....+..+.++..+|...|...+..++++..+.+.+..
T Consensus 61 f~~k~~~ilkil~p~~~~~~~~~l~l~~~~l~~~~~~~~y~~~~~~~~~y~al~~kd~~~F~~~~~~~~~~~~~~s~~~a 140 (659)
T KOG0060|consen 61 FFQKFLQILKILFPSTFSSQTALLLLALVALTLLTTADVYMIGNIPTKFYVALINKDAELFKRLLFKYVLLIPGISLLNA 140 (659)
T ss_pred HHHHHHHHHHHhccCccccHHHHHHHHHHHHHHHHHhHhheecccchhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355677788899999887777766655443332 3333333444455555666778888898888888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeecCCCCCCCCccchHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHH
Q 000647 817 SIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRM 896 (1374)
Q Consensus 817 ~~~~~~~~~~~~~~~~l~~~l~~~~lr~~~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~~~~~~~~~~~~~~w~l 896 (1374)
...+.+..+.++||.++++++++.|+++..||++.+.+...+|||||+++|+++++..++.+...++.+.+++++|+|++
T Consensus 141 ~~ky~~~~L~Lr~R~~ltk~lh~~Y~k~~~yYkis~~d~ridNPDQrltqDv~kf~~~l~sl~s~l~~a~~di~~Y~~~l 220 (659)
T KOG0060|consen 141 LLKFTTNELYLRFRKNLTKYLHRLYFKGFTYYKLSNLDDRIDNPDQRLTQDVEKFCRQLSSLYSNLLKAPFDLVYYTFRL 220 (659)
T ss_pred HHHHHHhhhHhHHHHHHHHHHHHHHhccceEEEecccccccCChHHHHhHHHHHHHHHHHHHHHhhhccceeeehhhhHH
Confidence 88889999999999999999999999999999999988888999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcHHHHHHHHHHHHHHHH
Q 000647 897 KALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLE 976 (1374)
Q Consensus 897 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~~e~~~~~~~~~~ll~ 976 (1374)
+...|+.+.+.+++|++++..+.+...+++..++..++++||+||+.|.+++.|+|+||||+|+..|+.+...+|+.+++
T Consensus 221 ~~s~g~~gp~~i~~Yf~~~~vi~~~L~~pI~~l~~~qeklEGdfRy~h~rlr~NaE~iAFY~g~~~E~~~~~~~f~~Lv~ 300 (659)
T KOG0060|consen 221 FESAGWLGPVSIFAYFLIGTVINKTLRGPIVKLTVEQEKLEGDFRYKHSRLRVNAEEIAFYRGGQVEHQRTDQRFRNLVQ 300 (659)
T ss_pred hhhcCcccHHHHHHHHHHHHHHHhhhccchhHHHHHHHHhhcchhhheeeeeecchhhhhhccCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 977 HSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKF 1056 (1374)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~~~~ 1056 (1374)
+.+..+..+|+.++.++++. .+...+.|.+... ..+.+....-.++.++...+..-+.++..++.+|+.+..+...+
T Consensus 301 ~l~~l~~~r~~l~f~~n~~~-Ylg~ilsy~vi~~--p~Fs~h~y~~~s~aEL~~~i~~na~~~i~Li~~f~~l~~~~~~l 377 (659)
T KOG0060|consen 301 HLRELMSFRFWLGFIDNIFD-YLGGILSYVVIAI--PFFSGHVYDDLSPAELSGLISNNAFVFIYLISAFGRLVDLSRDL 377 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhhheeeEEee--eeecccccCCcCHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhH
Confidence 99999888898888876654 3333333221100 01111111112356666666666667777888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCC------------CCccCCCCCCCCCCC-CCCCEEEeeeEEeCCC-cccccccceEE
Q 000647 1057 VELSGGINRIFELEELLDAAQPGD------------DEISGSSQHKWNSTD-YQDSISFSKLDIITPS-QKLLARQLTFE 1122 (1374)
Q Consensus 1057 ~~~~~~~~Ri~~l~~~~~~~~~~~------------~~~~~~~~~~w~~~~-~~g~I~f~~V~~~yp~-~~~vL~~ls~~ 1122 (1374)
.+++|.+.||.|+.+..+...... .......++.|+... .+..|+|++|++.+|+ ++.+.+||||+
T Consensus 378 s~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~~G~~~~~~~Dn~i~~e~v~l~tPt~g~~lie~Ls~~ 457 (659)
T KOG0060|consen 378 SRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLPPGSGKAEPADNAIEFEEVSLSTPTNGDLLIENLSLE 457 (659)
T ss_pred HHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCCCCCcccccccceEEeeeeeecCCCCCceeeeeeeeE
Confidence 999999999999998866543211 000112233333321 2457999999999999 66777889999
Q ss_pred EeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecCCCCCCCcchHHHhccCCChhHHH
Q 000647 1123 IVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAE 1202 (1374)
Q Consensus 1123 I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~ 1202 (1374)
|+.|+.++||||||||||||+|+|.+|||..+|+++.+...-. ..+.||||+||+..||+|||++||....+.
T Consensus 458 V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~~~------~~lfflPQrPYmt~GTLRdQvIYP~~~~~~- 530 (659)
T KOG0060|consen 458 VPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDGGP------KDLFFLPQRPYMTLGTLRDQVIYPLKAEDM- 530 (659)
T ss_pred ecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccCCC------CceEEecCCCCccccchhheeeccCccccc-
Confidence 9999999999999999999999999999999999998765211 359999999999999999999999764321
Q ss_pred HHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccc--cccccCCChhhhhhhccccchhhHHhhhccc
Q 000647 1203 LRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN--LNWEDILSLGEQQRLGMVSHLVLIQLCSINK 1280 (1374)
Q Consensus 1203 ~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~--~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~ 1280 (1374)
+....+|+++..+||.|+|.+++++. +|||++ .+|.+.||+||||||||
T Consensus 531 --------------~~~~~~d~~i~r~Le~v~L~hl~~r~-ggld~~~~~dW~dvLS~GEqQRLa~-------------- 581 (659)
T KOG0060|consen 531 --------------DSKSASDEDILRILENVQLGHLLERE-GGLDQQVDWDWMDVLSPGEQQRLAF-------------- 581 (659)
T ss_pred --------------cccCCCHHHHHHHHHHhhhhhHHHHh-CCCCchhhccHHhhcCHHHHHHHHH--------------
Confidence 12346789999999999999999996 899965 58999999999999999
Q ss_pred ccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchhhccceEEE
Q 000647 1281 ISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRL 1360 (1374)
Q Consensus 1281 ~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~~~~TvI~IaHRl~~i~~~~~~l~l 1360 (1374)
||.+++|||+.+|||||||+|.|+|.++|+.++++|+|+|+|+||.++.+||+.+|++
T Consensus 582 ----------------------ARLfy~kPk~AiLDE~TSAv~~dvE~~~Yr~~r~~giT~iSVgHRkSL~kfHd~~L~~ 639 (659)
T KOG0060|consen 582 ----------------------ARLFYHKPKFAILDECTSAVTEDVEGALYRKCREMGITFISVGHRKSLWKFHDYVLRM 639 (659)
T ss_pred ----------------------HHHHhcCCceEEeechhhhccHHHHHHHHHHHHHcCCeEEEeccHHHHHhhhhEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCeEEEeCC
Q 000647 1361 IDGEGNWELRTIS 1373 (1374)
Q Consensus 1361 ~~g~g~~~~~~~~ 1373 (1374)
||+|+|+++.|+
T Consensus 640 -~g~g~w~~~~I~ 651 (659)
T KOG0060|consen 640 -DGRGSWRFHQID 651 (659)
T ss_pred -cCCCceEEEEec
Confidence 999999999885
No 13
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.3e-69 Score=688.74 Aligned_cols=562 Identities=34% Similarity=0.606 Sum_probs=468.7
Q ss_pred hHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 85 LKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTS 164 (1374)
Q Consensus 85 ~~~l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~ 164 (1374)
++++.+|++++.|+|.++++..++++++++++++++++.+|.+.+.++|++.+++...|...++.+++++++.++++++.
T Consensus 76 ~~~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~ 155 (659)
T TIGR00954 76 LGKLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAI 155 (659)
T ss_pred HHHHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999988899999999999999999999999999999988888877777777777778889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCS 244 (1374)
Q Consensus 165 ~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 244 (1374)
+|+.+++..+||++++++++++|+++..+|++.++|++.+|++||+|+|++.+++.+...+..++.++++.+.+.+.++.
T Consensus 156 ~~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 156 KYLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDSRIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988899999999999999999999999999999988887777765
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 000647 245 YASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHM 324 (1374)
Q Consensus 245 ~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~ 324 (1374)
..+|.+++.+++++++..++.+++++++.+++.++++.+++++..+.+..+|+|+|++|++|+.|.+++++.++++.++.
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 57888888888888888888889999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccc-ccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 325 RVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGN-LKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRL 403 (1374)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 403 (1374)
.+..+....+..+..++..+....++++++..+++... ...+..+.|.. ++.+.....++..++.++..+......+
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~--~~~f~~~~~~~~~l~~~~~~l~~~~~~i 393 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEEL--MQEFYNNGRLLLKAADALGRLMLAGRDM 393 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777777777776666544444444444434443211 11123344432 2212222334556778889999999999
Q ss_pred HHHHHHHHHHHHHHhhcccccccC--C-CCCC-CC-------------CCCccCCCCcEEEeeeEEEcCCCCeeeeeeeE
Q 000647 404 NRLSGYADRIHELMVISRELSIED--K-SPQR-NG-------------SRNYFSEANYIEFSGVKVVTPTGNVLVENLTL 466 (1374)
Q Consensus 404 ~~~~~~~~Ri~~~~~~~~~~~~~~--~-~~~~-~~-------------~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl 466 (1374)
+++.++++|+.++++.+++.+.+. . .... .. ........+.++++||++.||+++++++|+||
T Consensus 394 ~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~~~il~~isl 473 (659)
T TIGR00954 394 TRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNGDVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCCCeeeecceE
Confidence 999999999999998755432100 0 0000 00 00011123569999999999877789999999
Q ss_pred EEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCCCCcCCHHHHhcCCCCCCcc-cCC
Q 000647 467 KVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEP 545 (1374)
Q Consensus 467 ~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~-~~~ 545 (1374)
++++||+++|+||||||||||+++|+|+|+|++|+|.+++ +++++||||+|+++++|++|||.++...... ...
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~ 548 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRG 548 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccC
Confidence 9999999999999999999999999999999999999875 4579999999999999999999997532111 112
Q ss_pred CCHHHHHHHHHHcCChhHHhcCCC--CccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh
Q 000647 546 LTHGGMVELLKNVDLEYLLDRYPP--EKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA 623 (1374)
Q Consensus 546 ~~~~~~~~~l~~~~L~~~~~~~~~--~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~ 623 (1374)
.+++++.++++.+++++++++ |. ++..+|+.+||||||||++||||++++|+++|||||||+||+++++.+++.+++
T Consensus 549 ~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~ 627 (659)
T TIGR00954 549 LSDKDLEQILDNVQLTHILER-EGGWSAVQDWMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCRE 627 (659)
T ss_pred CCHHHHHHHHHHcCCHHHHhh-cCCcccccccccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHH
Confidence 456788999999999999887 54 344468889999999999999999999999999999999999999999999988
Q ss_pred cCCEEEEEccChhhHhhccEEEEecCCCceE
Q 000647 624 MGTSCITISHRPALVAFHDVVLSLDGEGEWR 654 (1374)
Q Consensus 624 ~~~TiI~vtH~~~~~~~~d~il~l~~~g~~~ 654 (1374)
.|+|+|+||||++.+++||++++++++|+|.
T Consensus 628 ~~~tvI~isH~~~~~~~~d~il~l~~~g~~~ 658 (659)
T TIGR00954 628 FGITLFSVSHRKSLWKYHEYLLYMDGRGGYQ 658 (659)
T ss_pred cCCEEEEEeCchHHHHhCCEEEEEeCCCCcc
Confidence 8999999999999999999999999988885
No 14
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.8e-68 Score=632.82 Aligned_cols=529 Identities=21% Similarity=0.268 Sum_probs=415.3
Q ss_pred hHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCh-hHHHHHHHHHHHHHHHHHHHHH
Q 000647 85 LKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFL-RRV-PLFFQLISENILLCFLLSTMHS 162 (1374)
Q Consensus 85 ~~~l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~-~~~-~~f~~~l~~~~~~~~~~~~~~~ 162 (1374)
...++||+..+-|.|+ .+.+.++++++...+++.+|++.|++.|.+.. .+. ..|.+......++.++.++++.
T Consensus 132 ~~~~~rl~~l~~~~~~-----~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~ 206 (716)
T KOG0058|consen 132 HTLLKRLLGLLKPEWK-----WLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANA 206 (716)
T ss_pred hhHHHHHHHHhchhHH-----HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3477899999988766 36677777888888999999999999999987 333 3333333333333344444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 163 TSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWR 241 (1374)
Q Consensus 163 ~~~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~ 241 (1374)
+..|+-+.... ++..+++...|++...++++|||. +.++..+|++.|...+.+.+...+...+.+.+.++. ...
T Consensus 207 ~r~~~~~~a~~----rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g-~~~ 281 (716)
T KOG0058|consen 207 IRGGLLQYAGE----RVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFG-GLG 281 (716)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHH
Confidence 55555555555 478888889999999999999986 578999999999999999999999888888776544 345
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHH
Q 000647 242 LCSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALT 321 (1374)
Q Consensus 242 l~~~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~ 321 (1374)
+|++.||.++++.++.+++...+...+|+.+.++..+.|+.-|...+..++...+..+|+.|++|+.|.+++++..++..
T Consensus 282 ~M~~~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~ 361 (716)
T KOG0058|consen 282 FMFSLSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVL 361 (716)
T ss_pred HHhhhhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHH
Confidence 56778999999988888888888889999999999999998888877777777788889999999999976666655544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccC-CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 322 RHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKP-DTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISS 400 (1374)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 400 (1374)
+-.++.. ...+.++. ...+++.. ..+...+++|.+.. +..+.| .+.+++.|. ..+..++..+...+
T Consensus 362 ~i~~k~a---~a~~~f~~-~~~~~~~~---~~~siL~~Gg~Lv~~g~mt~g--~L~sFllY~----~~~g~sl~~ls~~y 428 (716)
T KOG0058|consen 362 KLSKKEA---VAYGIFFG-STNLLGNL---AVLSILFYGGHLVLTGSLTSG--ALSSFLLYQ----VQLGSSLSGLSSFY 428 (716)
T ss_pred HHHHHHH---HHhhHhHh-HHHHHHhH---HHHHHHHhccchhhcCccchh--HHHHHHHHH----HHHHHHHHHHHHHH
Confidence 4332211 11111111 11111111 11112234555532 233444 344444333 34456777888889
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC--CeeeeeeeEEEeCCCEEEEEc
Q 000647 401 RRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITG 478 (1374)
Q Consensus 401 ~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~isl~i~~Ge~~~IvG 478 (1374)
..+.+..++.+|++|++++.+..+..+.. .+..-.+.|+|+||+|.||+. .++|+|+||+|+|||.+|+||
T Consensus 429 s~lmkgvGAs~rvFel~dr~P~i~~~G~~-------~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVG 501 (716)
T KOG0058|consen 429 SELMKGVGASERVFELMDRKPRIPLTGTL-------APDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVG 501 (716)
T ss_pred HHHHHhcchHHHHHHHhccCCCCCCCCcc-------ccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEEC
Confidence 99999999999999999988766432110 001135789999999999975 469999999999999999999
Q ss_pred CCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHH
Q 000647 479 PNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMV 552 (1374)
Q Consensus 479 ~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~ 552 (1374)
|||+||||+.++|.++|+|++|+|.+||.+ ..+|++||+|.|+|.||++||+|||.||.. ..+++++.
T Consensus 502 PSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~------~~t~e~i~ 575 (716)
T KOG0058|consen 502 PSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLD------NATDEEIE 575 (716)
T ss_pred CCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCC------CCCHHHHH
Confidence 999999999999999999999999999986 347899999999999999999999999976 36889999
Q ss_pred HHHHHcCChhHHhcCCCCcccc---CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCE
Q 000647 553 ELLKNVDLEYLLDRYPPEKEIN---WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTS 627 (1374)
Q Consensus 553 ~~l~~~~L~~~~~~~~~~~~~~---~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~T 627 (1374)
++.+.++.++|+..+|++++|. .|.+|||||||||||||||++||.||||||+|||||.++|..+.+.+.+ .++|
T Consensus 576 ~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rT 655 (716)
T KOG0058|consen 576 AAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRT 655 (716)
T ss_pred HHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCe
Confidence 9999999999999999988774 5789999999999999999999999999999999999999999999975 5899
Q ss_pred EEEEccChhhHhhccEEEEecC
Q 000647 628 CITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 628 iI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+|+|+||+++++.+|+|+++++
T Consensus 656 VlvIAHRLSTV~~Ad~Ivvi~~ 677 (716)
T KOG0058|consen 656 VLVIAHRLSTVRHADQIVVIDK 677 (716)
T ss_pred EEEEehhhhHhhhccEEEEEcC
Confidence 9999999999999999999986
No 15
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.5e-69 Score=642.52 Aligned_cols=467 Identities=21% Similarity=0.269 Sum_probs=314.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CcceeeecCCCCCCCCccchHHHHHHHHHHHHHHHH
Q 000647 802 GVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRK-NSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVT 880 (1374)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~-~~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~ 880 (1374)
++.+..+++..+-...+.+..++...+.| ..++++.+++ ..|||... ..|+.+|++.|.+.+...++..+.
T Consensus 196 ~l~~~~a~~~~~r~~~~~~a~~rv~~rlR----~~lF~sil~QdiaFFD~nk----tGeL~SRLtsD~~~vs~svs~nls 267 (716)
T KOG0058|consen 196 GLFLIGALANAIRGGLLQYAGERVVARLR----TDLFRSLLRQDIAFFDENK----TGELISRLTSDTQIVSNSVSQNLS 267 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhhhhhhhccCC----ccHHHhhhhhhHHHHHHHHHHHHH
Confidence 33444444444444455555555555555 5555555654 69998643 356899999999877665544333
Q ss_pred ----HhhH---hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHH
Q 000647 881 ----GMVK---PSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAES 953 (1374)
Q Consensus 881 ----~~~~---~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aes 953 (1374)
.++. .+...++.+|+|++++-. .+++.++....|-+ .+.+++.+.|..-+......+..-.+..+
T Consensus 268 ~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i----~~P~v~~~~~~yG~----~~rklS~~~Q~a~A~a~~vaeE~ls~~rT 339 (716)
T KOG0058|consen 268 DGLRNLVQGFGGLGFMFSLSWRLTLVTLI----VVPIVALVAKIYGK----YLRKLSKQTQDALARANQVAEEVLSAMRT 339 (716)
T ss_pred HHHHHHHHHHHhHHHHhhhhHHHHHHHHH----HhcHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 2222 234457789999988621 11111111111211 12233333333322222222333345678
Q ss_pred hhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHhhhhhHHHHHHHHHHHhhhcccchhhhhhhHHHHHH
Q 000647 954 VAFFGGGAREKAMIESRFRELLEHSLLLLKKKW-LFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHAL 1032 (1374)
Q Consensus 954 Ia~~~g~~~e~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~a~ 1032 (1374)
++.|+.+..|.+. |.+.+++.....++.. .+++. .+.+. +..+......++|+........+ +.|++..-+
T Consensus 340 VRsfa~E~~E~~r----y~~~l~~~~~i~~k~a~a~~~f-~~~~~-~~~~~~~~siL~~Gg~Lv~~g~m--t~g~L~sFl 411 (716)
T KOG0058|consen 340 VRSFAAEEQEVKR----YNKKLREVLKLSKKEAVAYGIF-FGSTN-LLGNLAVLSILFYGGHLVLTGSL--TSGALSSFL 411 (716)
T ss_pred HHHhhhhHHHHHH----HHHHHHHHHHHHHHHHHHhhHh-HhHHH-HHHhHHHHHHHHhccchhhcCcc--chhHHHHHH
Confidence 9999876666554 4444444333333322 22221 11111 11222223345566433222211 234432222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCc
Q 000647 1033 RFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ 1112 (1374)
Q Consensus 1033 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~ 1112 (1374)
. +..+...+...+...+....+..+|.+|+||++++.|..++. +. .-|. ..+|.|+|+||+|.||++
T Consensus 412 l----Y~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~-----G~---~~p~-~~~G~IeF~~VsFaYP~R 478 (716)
T KOG0058|consen 412 L----YQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT-----GT---LAPD-HLQGVIEFEDVSFAYPTR 478 (716)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC-----Cc---cccc-cccceEEEEEeeeecCCC
Confidence 1 222333455556666777778889999999999876443321 11 1122 358999999999999996
Q ss_pred c--cccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcch
Q 000647 1113 K--LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTL 1188 (1374)
Q Consensus 1113 ~--~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTl 1188 (1374)
| +||+|+||+|+|||+||+||||||||||+.++|+|||+|++|+|++||+||+++ .++|++|++|.|||+||+|||
T Consensus 479 p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI 558 (716)
T KOG0058|consen 479 PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSI 558 (716)
T ss_pred CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccH
Confidence 4 699999999999999999999999999999999999999999999999999999 488999999999999999999
Q ss_pred HHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccc
Q 000647 1189 RDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMV 1267 (1374)
Q Consensus 1189 R~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~ 1267 (1374)
||||.||.+. ..|+++..+.+.++-++++..+|+||||.+ ++|.+|||||||||||
T Consensus 559 ~eNI~YG~~~----------------------~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAI- 615 (716)
T KOG0058|consen 559 RENIAYGLDN----------------------ATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAI- 615 (716)
T ss_pred HHHHhcCCCC----------------------CCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHH-
Confidence 9999999752 234444444455555667888999999998 5899999999999999
Q ss_pred cchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEec
Q 000647 1268 SHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSS 1345 (1374)
Q Consensus 1268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~Ia 1345 (1374)
||||+|||+||||||||||||+++|..+++.+.. .++|||+||
T Consensus 616 -----------------------------------ARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIA 660 (716)
T KOG0058|consen 616 -----------------------------------ARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIA 660 (716)
T ss_pred -----------------------------------HHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEe
Confidence 9999999999999999999999999988887642 589999999
Q ss_pred CCCCchhhccceEEEEcC
Q 000647 1346 QRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1346 HRl~~i~~~~~~l~l~~g 1363 (1374)
|||+||+-.|.++.+.+|
T Consensus 661 HRLSTV~~Ad~Ivvi~~G 678 (716)
T KOG0058|consen 661 HRLSTVRHADQIVVIDKG 678 (716)
T ss_pred hhhhHhhhccEEEEEcCC
Confidence 999999999999999544
No 16
>KOG0064 consensus Peroxisomal long-chain acyl-CoA transporter, ABC superfamily [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-67 Score=600.56 Aligned_cols=563 Identities=36% Similarity=0.641 Sum_probs=469.3
Q ss_pred HHHHhhHhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 740 LRVADMFKVLVPTVFDKQGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIR 819 (1374)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1374)
.++..+.++++|..+.+..+++....+.+.+++|++..++.++|..++...+++...|...++-.++.++..+|++.+++
T Consensus 99 k~l~~L~Kilip~vfc~e~gll~~hs~~Li~RTfLSl~VA~LdGqlVk~Ivrk~~r~F~~~LlkW~liaiPAtFvNS~Ir 178 (728)
T KOG0064|consen 99 KRLNVLSKILIPTVFCKETGLLTAQSFFLISRTFLSLFVAKLDGQLVKNIVRKRGRQFLWDLLKWFLIAIPASFVNSAIR 178 (728)
T ss_pred HHHHHHHHHhcchHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHhhhccHHHHHHHHH
Confidence 34556788999999988888888888999999999999999999998888888888887666667788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcceeeecCCCCCCCCccchHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHh
Q 000647 820 HLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKAL 899 (1374)
Q Consensus 820 ~~~~~~~~~~~~~l~~~l~~~~lr~~~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~~~~~~~~~~~~~~w~l~~~ 899 (1374)
++...+++.+|.+++.|+++.||.+..||++.|+.+..-|+||++|+|+..++...+.+...+.+|+++++.++..+...
T Consensus 179 yle~klaLafrtrL~~h~y~~Y~snqTyY~Vsn~d~~i~n~D~sLTeDI~~Fs~svahLysnLtKP~lDl~l~s~~L~~s 258 (728)
T KOG0064|consen 179 YLESKLALAFRTRLTRHAYDMYLSNQTFYKVSNLDSVIENADNSLTEDIAKFSDSVAHLYSNLTKPVLDLILISFTLLDS 258 (728)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCceEEEecccchhcCccchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999988887766
Q ss_pred hhhhHH---HHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcHHHHHHHHHHHHHHHH
Q 000647 900 TGQRGV---AILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLE 976 (1374)
Q Consensus 900 ~~~~~v---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~~e~~~~~~~~~~ll~ 976 (1374)
..+.+. .++...+.+....+|.++|+|+++..+..+.++.+|+.|.++-+++|.||||||...|.+.++..|..+.+
T Consensus 259 ~~s~g~~~~~~~~lvv~lTa~iLr~~sP~Fg~Lv~eeA~r~g~lr~~Hs~ii~NsEEIAfy~GhkvE~~ql~~sy~~L~~ 338 (728)
T KOG0064|consen 259 ATSVGAAGITLAGLVVYLTAFILRAVSPKFGKLVAEEAARKGYLRYLHSNIITNSEEIAFYGGHKVELTQVDESYNRLVE 338 (728)
T ss_pred hccccccchhhhhhHHHHHHHHHHHhCCchhhHHHHHHhhccHHHHHHHHHhccHHHHHhhcccHHHHHHHHHHHHHHHH
Confidence 655443 23445556667789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHH-HHH-------Hhhhcccc-----hhhhhhhHHHHHHHHHHHHHHHHH
Q 000647 977 HSLLLLKKKWLFGILDDFVTKQLPHNVTWGLS-LLY-------AMEHKGDR-----ALVSTQGELAHALRFLASVVSQSF 1043 (1374)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-l~~-------~~~~~~~~-----~~~~~~~~~~~a~~~~a~~~~~~~ 1043 (1374)
......+++.|+-++.+|+.+. +|+-+ +++ +....... ...+...++..+-+. .....
T Consensus 339 qm~li~k~r~~YiMleqF~mKY-----vWsg~GlvmvsiPI~~~t~~s~~~~~~~e~~~srt~~f~t~r~L----L~saA 409 (728)
T KOG0064|consen 339 QMNLIFKVRLWYIMLEQFVMKY-----TWSGTGLVMVSIPILTSTLASEGTLQLSEEGNSRTKEFITNRRL----LLSAA 409 (728)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----hhccCceEEEEeeeeecccCCCCcccccccchhHHHHHHHHHHH----HHHHH
Confidence 9888888998988888777653 34321 111 10000000 001111222222221 22345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc--------cCC-----CCCCCCC---CCCCCCEEEeeeEE
Q 000647 1044 LAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEI--------SGS-----SQHKWNS---TDYQDSISFSKLDI 1107 (1374)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~--------~~~-----~~~~w~~---~~~~g~I~f~~V~~ 1107 (1374)
.+.+++++.+++++++.|..+|++++.+..++++...... .+. ....-|. ......|.|+||.+
T Consensus 410 dAieRlMssyKeItqLaGyt~Rv~~mf~v~~dv~~g~~~k~~v~e~~~~~~~~e~r~s~~l~~~~~i~~~~gI~lenIpv 489 (728)
T KOG0064|consen 410 DAIERLMSSYKEITQLAGYTNRVFTMFSVLHDVHKGNYNKTAVPEILSSRTIDESRNSNPLPTTDAIRNFNGIILENIPV 489 (728)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcccccccccCchhhccCccccccCCcCCccchhhcccceEEecCce
Confidence 6788899999999999999999999887766543321110 000 0000000 11234699999999
Q ss_pred eCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecCCCCCCCcc
Q 000647 1108 ITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGT 1187 (1374)
Q Consensus 1108 ~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ~P~Lf~GT 1187 (1374)
.+|+...|...+||.|+||.+++|+||||||||||++.|.|+||...|...+|.. .+|+||||+||+--||
T Consensus 490 ItP~~~vvv~~Ltf~i~~G~hLLItGPNGCGKSSLfRILggLWPvy~g~L~~P~~---------~~mFYIPQRPYms~gt 560 (728)
T KOG0064|consen 490 ITPAGDVLVPKLTFQIEPGMHLLITGPNGCGKSSLFRILGGLWPVYNGLLSIPRP---------NNIFYIPQRPYMSGGT 560 (728)
T ss_pred eccCcceeecceeEEecCCceEEEECCCCccHHHHHHHHhccCcccCCeeecCCC---------cceEeccCCCccCcCc
Confidence 9999999999999999999999999999999999999999999999999999876 4699999999999999
Q ss_pred hHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCChhhhhhhccc
Q 000647 1188 LRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMV 1267 (1374)
Q Consensus 1188 lR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSgGQrQrlai~ 1267 (1374)
+||+|+||.+.++- . . -...|.++..+|..|+|.+++++. +|||...+|.+.||||||||++|
T Consensus 561 lRDQIIYPdS~e~~--~---~----------kg~~d~dL~~iL~~v~L~~i~qr~-~g~da~~dWkd~LsgGekQR~~m- 623 (728)
T KOG0064|consen 561 LRDQIIYPDSSEQM--K---R----------KGYTDQDLEAILDIVHLEHILQRE-GGWDAVRDWKDVLSGGEKQRMGM- 623 (728)
T ss_pred ccceeecCCcHHHH--H---h----------cCCCHHHHHHHHHHhhHHHHHHhc-cChhhhccHHhhccchHHHHHHH-
Confidence 99999999875432 1 1 146788999999999999999885 78999999999999999999999
Q ss_pred cchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCC
Q 000647 1268 SHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQR 1347 (1374)
Q Consensus 1268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~~~~TvI~IaHR 1347 (1374)
||.+.|+||..+|||||||++.|+|..+++.+++.|++.|+|+||
T Consensus 624 -----------------------------------ARm~yHrPkyalLDEcTsAvsidvE~~i~~~ak~~gi~llsithr 668 (728)
T KOG0064|consen 624 -----------------------------------ARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGISLLSITHR 668 (728)
T ss_pred -----------------------------------HHHHhcCcchhhhhhhhcccccchHHHHHHHHHhcCceEEEeecC
Confidence 999999999999999999999999999999999999999999999
Q ss_pred CCchhhccceEEEEcCCCCeEEEeCC
Q 000647 1348 PALIPFHSLELRLIDGEGNWELRTIS 1373 (1374)
Q Consensus 1348 l~~i~~~~~~l~l~~g~g~~~~~~~~ 1373 (1374)
+++++||+..|.+ ||+|+|.++...
T Consensus 669 pslwk~h~~ll~~-dg~g~~q~~~ln 693 (728)
T KOG0064|consen 669 PSLWKYHTHLLEF-DGEGGWQFRALN 693 (728)
T ss_pred ccHHHHHHHHHhc-cCCCCeeeccCC
Confidence 9999999999999 999999998753
No 17
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.1e-63 Score=599.07 Aligned_cols=514 Identities=27% Similarity=0.431 Sum_probs=416.4
Q ss_pred HHHHHHhhhchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeecC
Q 000647 774 ISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNM 853 (1374)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~~f~~~~~~ 853 (1374)
...+++.+++..++.+...|...|+..+.++...++....+.....++..++..+||++|+.+++++||.+..||+....
T Consensus 62 ~~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~ 141 (604)
T COG4178 62 GQVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQA 141 (604)
T ss_pred eeeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhc
Confidence 33445556677778888888889988888887777777777888889999999999999999999999999999998777
Q ss_pred C--CCCCCCccchHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhhh--------------HHHHHHHHHHHHHH
Q 000647 854 S--SKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKALTGQR--------------GVAILYAYMLLGLG 917 (1374)
Q Consensus 854 ~--~~~~d~~~ri~~D~~~l~~~l~~~~~~~~~~~~~~~~~~w~l~~~~~~~--------------~v~i~~~~~~~~~~ 917 (1374)
+ ...+|||||+++|+..++.....+..+++.+++.++.|+-.|+.+++.. .+..++.|...+..
T Consensus 142 ~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~ 221 (604)
T COG4178 142 GGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASL 221 (604)
T ss_pred ccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHH
Confidence 6 4458999999999999999999999999999888888888887665531 23445667777777
Q ss_pred HHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHh
Q 000647 918 FLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTK 997 (1374)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 997 (1374)
....+++++.+++.+++++|++||+.+.++++++|+||+|+|++.|++.+..+|...++++..+..+...+....... .
T Consensus 222 ~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy-~ 300 (604)
T COG4178 222 LTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGY-G 300 (604)
T ss_pred HHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhh-h
Confidence 777889999999999999999999999999999999999999999999999999999998877665544333322111 1
Q ss_pred hhhhHHHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000647 998 QLPHNVTWGLSLLYAMEHKGDRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQ 1077 (1374)
Q Consensus 998 ~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~ 1077 (1374)
++...+.+.++.. ....|.. +.|.+ +..++++.++..+++++...++.++++.+.++|+.++.+..++.+
T Consensus 301 ~~s~v~P~li~ap--~~f~g~i----~~G~l----mqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~ 370 (604)
T COG4178 301 WLSVVLPILIAAP--RYFSGQI----TFGGL----MQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQ 370 (604)
T ss_pred HHHHHHHHHhccH--hhhcCcC----hHHHH----HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1111111111100 0112221 23333 334466677888999999999999999999999999998877544
Q ss_pred CCCCCccCCC-CCCCCCCCCCCCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCe
Q 000647 1078 PGDDEISGSS-QHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGS 1156 (1374)
Q Consensus 1078 ~~~~~~~~~~-~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~ 1156 (1374)
.+........ .-..-... +..|.|+|++...|++...++++||+|+|||++.|.|+||||||||+++|.|+||..+|+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~-~~~i~~~nl~l~~p~~~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~ 449 (604)
T COG4178 371 MDTEKPARTGRRIDFDDNA-DHGITLENLSLRTPDGQTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGR 449 (604)
T ss_pred CcccccCcccccccccccc-cceeEEeeeeEECCCCCeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCc
Confidence 2111111000 00000111 478999999999999889999999999999999999999999999999999999999999
Q ss_pred EecCCCccccccCCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCc
Q 000647 1157 LTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS 1236 (1374)
Q Consensus 1157 I~idg~dI~~~~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~ 1236 (1374)
|.+|.. +.+.|+||+||+..||+||.|+||.+. ....|+++.++|.+|+|+
T Consensus 450 I~~P~~---------~~~lflpQ~PY~p~GtLre~l~YP~~~--------------------~~~~d~~l~~vL~~vgL~ 500 (604)
T COG4178 450 ISMPAD---------SALLFLPQRPYLPQGTLREALCYPNAA--------------------PDFSDAELVAVLHKVGLG 500 (604)
T ss_pred eecCCC---------CceEEecCCCCCCCccHHHHHhCCCCC--------------------CCCChHHHHHHHHHcCcH
Confidence 999954 568999999999999999999999752 136799999999999999
Q ss_pred hhhhhhccCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEee
Q 000647 1237 YLLEREEVGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILD 1316 (1374)
Q Consensus 1237 ~~v~~~~~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLD 1316 (1374)
++++++ |....|...||+|||||||+ ||+++||||+++||
T Consensus 501 ~L~~rl----~~~~~W~~vLS~GEqQRlaf------------------------------------ARilL~kP~~v~LD 540 (604)
T COG4178 501 DLAERL----DEEDRWDRVLSGGEQQRLAF------------------------------------ARLLLHKPKWVFLD 540 (604)
T ss_pred HHHHHH----hccCcHhhhcChhHHHHHHH------------------------------------HHHHHcCCCEEEEe
Confidence 999986 44456999999999999999 99999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcCCCCeEE
Q 000647 1317 ECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDGEGNWEL 1369 (1374)
Q Consensus 1317 EaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g~g~~~~ 1369 (1374)
|||||||+++|..|++++++ .++|+|.|+||.+...||++.|++ +++|+|..
T Consensus 541 EATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l-~~~~~~~~ 594 (604)
T COG4178 541 EATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLEL-LDDAGGQN 594 (604)
T ss_pred cchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheee-cccccccc
Confidence 99999999999999999887 799999999999999999999999 68888753
No 18
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.7e-59 Score=601.67 Aligned_cols=528 Identities=19% Similarity=0.204 Sum_probs=390.8
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 87 SLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLR-RVPLFFQLISENILLCFLLSTMHSTSK 165 (1374)
Q Consensus 87 ~l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~-~~~~f~~~l~~~~~~~~~~~~~~~~~~ 165 (1374)
.++++++.+.|.++ .++..+++.++.+.+.+.+|.+.+.++|.+..+ +...|...++..+++ .++..+..
T Consensus 148 ~~~~l~~~~~~~~~-----~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 218 (711)
T TIGR00958 148 LLFRLLGLSGRDWP-----WLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLL----SIASSVSA 218 (711)
T ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH----HHHHHHHH
Confidence 34566666655443 356667778888899999999999999998744 445555433322222 22233344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 166 YITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCS 244 (1374)
Q Consensus 166 yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 244 (1374)
+++..+......++..+++.+.+++....+++++++ ..++..+|+++|++.+.+.+...+..++..++..+...+. +.
T Consensus 219 ~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~-l~ 297 (711)
T TIGR00958 219 GLRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGF-ML 297 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 455555555555677788888888888888887765 4579999999999999888777666666555544333332 33
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 000647 245 YASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHM 324 (1374)
Q Consensus 245 ~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~ 324 (1374)
+.+|.+++++++..++..++..+++++..+...+.++.++++........+++++|+.|++|+.|.+++++..++..+..
T Consensus 298 ~~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 377 (711)
T TIGR00958 298 WLSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLN 377 (711)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 56787777766666666666677888888888888888888888888888899999999999999988888877766654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 325 RVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLN 404 (1374)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 404 (1374)
.+.............++. .+...+.+.+....+..|. .+.|.. ++. ..+...+..++..+...+..+.
T Consensus 378 ~~~~~~~~~~~~~~~~~~-~~~~~~il~~g~~lv~~g~-----it~G~l--va~----~~~~~~l~~~l~~l~~~~~~~~ 445 (711)
T TIGR00958 378 KRKALAYAGYLWTTSVLG-MLIQVLVLYYGGQLVLTGK-----VSSGNL--VSF----LLYQEQLGEAVRVLSYVYSGMM 445 (711)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCC-----CCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 443222222222221111 1111111111111112232 345532 222 2233455667778888889999
Q ss_pred HHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCC--CCeeeeeeeEEEeCCCEEEEEcCCCC
Q 000647 405 RLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGS 482 (1374)
Q Consensus 405 ~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~~isl~i~~Ge~~~IvG~sGs 482 (1374)
+..++.+|+.++++.+++...... .......+.|+++||+|.||+ ++++|+|+||+|++||+++|+|||||
T Consensus 446 ~~~~a~~ri~~~l~~~~~~~~~~~-------~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGs 518 (711)
T TIGR00958 446 QAVGASEKVFEYLDRKPNIPLTGT-------LAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGS 518 (711)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCC-------CCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCC
Confidence 999999999999876543221100 000112356999999999986 35799999999999999999999999
Q ss_pred chhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHH
Q 000647 483 GKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLK 556 (1374)
Q Consensus 483 GKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~ 556 (1374)
|||||+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|++|+||||.|+.+. .+++++.++++
T Consensus 519 GKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~------~~~e~i~~al~ 592 (711)
T TIGR00958 519 GKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTD------TPDEEIMAAAK 592 (711)
T ss_pred CHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCC------CCHHHHHHHHH
Confidence 99999999999999999999999975 3467899999999999999999999998542 45788999999
Q ss_pred HcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhcCCEEEEEcc
Q 000647 557 NVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISH 633 (1374)
Q Consensus 557 ~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~~~TiI~vtH 633 (1374)
.++++++++++|.+.++ +.|.+||||||||++||||++++|+++|||||||+||+++++.+++.....++|+|+|||
T Consensus 593 ~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~~~~~~~~TvIiItH 672 (711)
T TIGR00958 593 AANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQESRSRASRTVLLIAH 672 (711)
T ss_pred HcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHHhhccCCCeEEEEec
Confidence 99999999999977665 467899999999999999999999999999999999999999999843446899999999
Q ss_pred ChhhHhhccEEEEecC
Q 000647 634 RPALVAFHDVVLSLDG 649 (1374)
Q Consensus 634 ~~~~~~~~d~il~l~~ 649 (1374)
|++.++.+|+|+++++
T Consensus 673 rl~~i~~aD~IivL~~ 688 (711)
T TIGR00958 673 RLSTVERADQILVLKK 688 (711)
T ss_pred cHHHHHhCCEEEEEEC
Confidence 9999999999999986
No 19
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1e-58 Score=589.00 Aligned_cols=565 Identities=37% Similarity=0.633 Sum_probs=423.6
Q ss_pred HHHhhHhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 741 RVADMFKVLVPTVFDKQGAQLLAVAFLVVSRTWISDRIASLNGTTVKYVLEQDKASFVRLIGVSVLQSAASSFIAPSIRH 820 (1374)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1374)
++..+++.+.|.+.+++.+.+...+...+..++++..++.+.+..+..+...+...|...+...++..++.+++.....+
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~ 157 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKY 157 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677778877665555655556666667777666666666666555555556665555555556666777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcceeeecCCCCCCCCccchHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh
Q 000647 821 LTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKALT 900 (1374)
Q Consensus 821 ~~~~~~~~~~~~l~~~l~~~~lr~~~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~~~~~~~~~~~~~~w~l~~~~ 900 (1374)
+..++...||.+++.++.+.|+++..+|+....+....|+++|+++|++.+...+...+..++.++++++++.+.+....
T Consensus 158 ~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~ 237 (659)
T TIGR00954 158 LLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDSRIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTAL 237 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88999999999999999999999888888654443557899999999999999988888888888877777666665533
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcHHHHHHHHHHHHHHHHHHHH
Q 000647 901 GQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIESRFRELLEHSLL 980 (1374)
Q Consensus 901 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~~e~~~~~~~~~~ll~~~~~ 980 (1374)
++....++++++.+.....+...+++.+...+.++.++.++..+.....+.|+|++|+++..|.+.+.+.+.++.+....
T Consensus 238 ~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~ 317 (659)
T TIGR00954 238 GSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNL 317 (659)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444555556666777788899999999999999999999999999999999999999999999999988887766
Q ss_pred HHHHHHHhhhHHHHHHhhhhhHHHH-HHHHHHHhhhcc-cchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 981 LLKKKWLFGILDDFVTKQLPHNVTW-GLSLLYAMEHKG-DRALVSTQGELAHALRFLASVVSQSFLAFGDILELHRKFVE 1058 (1374)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~~~~~~~-~~~~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~~~~~~ 1058 (1374)
..+...++..+..++.......+.+ +.+..+. ...+ ..+ ..+.+.+...+......+.+.+.+++.+.....++.+
T Consensus 318 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~-~~~~~~~g-~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~ 395 (659)
T TIGR00954 318 IIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIF-DKTHPAFL-EMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTR 395 (659)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccccc-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555544444443332211111111 1111111 0110 000 0122332222222223344566788888899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCC----CCccCC--------CCCCCC---CCCCCCCEEEeeeEEeCCCcccccccceEEE
Q 000647 1059 LSGGINRIFELEELLDAAQPGD----DEISGS--------SQHKWN---STDYQDSISFSKLDIITPSQKLLARQLTFEI 1123 (1374)
Q Consensus 1059 ~~~~~~Ri~~l~~~~~~~~~~~----~~~~~~--------~~~~w~---~~~~~g~I~f~~V~~~yp~~~~vL~~ls~~I 1123 (1374)
+.++++||+++.+.+++.+... ...... ++..++ .....+.|+|+||+++||+++++|+|+||+|
T Consensus 396 ~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~~~il~~isl~i 475 (659)
T TIGR00954 396 LAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNGDVLIESLSFEV 475 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCCCeeeecceEEE
Confidence 9999999999998765432110 000000 000010 0112467999999999987778999999999
Q ss_pred eCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecCCCCCCCcchHHHhccCCChhHHHH
Q 000647 1124 VPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAEL 1203 (1374)
Q Consensus 1124 ~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~ 1203 (1374)
++||+++|+||||||||||+++|.|+|+|.+|+|.+|+ |+++++|||+|++|++|+||||.||....+.
T Consensus 476 ~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~---------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~-- 544 (659)
T TIGR00954 476 PSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA---------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDM-- 544 (659)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC---------CCcEEEECCCCCCCCcCHHHHHhcCCChhhh--
Confidence 99999999999999999999999999999999998875 3679999999999999999999988542110
Q ss_pred HHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCChhhhhhhccccchhhHHhhhcccccc
Q 000647 1204 RALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISE 1283 (1374)
Q Consensus 1204 ~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~ 1283 (1374)
......+++++++++.+++.+++++ |.||||..+|+..||||||||++|
T Consensus 545 -------------~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~~~~~LSgGqkQRl~i----------------- 593 (659)
T TIGR00954 545 -------------KRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQDWMDVLSGGEKQRIAM----------------- 593 (659)
T ss_pred -------------hccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccccccCCCHHHHHHHHH-----------------
Confidence 0012346678899999999999887 899999988999999999999999
Q ss_pred hhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchhhccceEEEEcC
Q 000647 1284 LDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1284 ~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
|||++++|+++|||||||+||+++++.+++.+++.|+|+|+|+||++++++||+++.| +|
T Consensus 594 -------------------ARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~~~tvI~isH~~~~~~~~d~il~l-~~ 653 (659)
T TIGR00954 594 -------------------ARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREFGITLFSVSHRKSLWKYHEYLLYM-DG 653 (659)
T ss_pred -------------------HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHcCCEEEEEeCchHHHHhCCEEEEE-eC
Confidence 9999999999999999999999999999998877899999999999999999999999 79
Q ss_pred CCCeEE
Q 000647 1364 EGNWEL 1369 (1374)
Q Consensus 1364 ~g~~~~ 1369 (1374)
+|+|++
T Consensus 654 ~g~~~~ 659 (659)
T TIGR00954 654 RGGYQF 659 (659)
T ss_pred CCCccC
Confidence 999985
No 20
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.4e-58 Score=578.31 Aligned_cols=526 Identities=19% Similarity=0.239 Sum_probs=400.1
Q ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAF-LRRVPLFFQLISENILLCFLLSTMHSTSKY 166 (1374)
Q Consensus 88 l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~-~~~~~~f~~~l~~~~~~~~~~~~~~~~~~y 166 (1374)
+.++++.++++++ .+.-+++.+++-+.+++..|....-++|... +.+.+..+- ..+..++..++..+..+
T Consensus 142 ~~~f~~~~~~~~~-----~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~v----l~ig~~~~~l~~~~l~~ 212 (709)
T COG2274 142 LSWFIPLLFKYRR-----LLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTV----LAIGLLLAALFEALLRL 212 (709)
T ss_pred hHhHHHHHHhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHH----HHHHHHHHHHHHHHHHH
Confidence 4455566655544 2455666677788888888888888888655 333333221 12222233445677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000647 167 ITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSY 245 (1374)
Q Consensus 167 l~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~ 245 (1374)
++..+.....+++...+..+++++..+.|++|+.++ .++...|+. |++.+.+.+..-+...+.-++..++|. .++.+
T Consensus 213 lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l-~vm~~ 290 (709)
T COG2274 213 LRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFL-AVMFL 290 (709)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 888888888888999999999999999999999865 567777765 667655555444433333222233333 23456
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 000647 246 ASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMR 325 (1374)
Q Consensus 246 ~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~ 325 (1374)
++|.+++++++.+++..++..++.|++.+.+.++.+..++-...+.+...++|+||..+.|.+...+|++.|.+..+...
T Consensus 291 ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~ 370 (709)
T COG2274 291 YSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGF 370 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Confidence 78888888777777777777778899999888888877877777888888999999999999999999999998887655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc-cCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 326 VVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNL-KPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLN 404 (1374)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 404 (1374)
+..+...+.+.+..++....... ++ |++..+ ..+..|+|....+. .+...+.+++.+++....+++
T Consensus 371 ~~~~~~~~~~~~~~~l~~l~~v~---iL----~~G~~lVl~~~lTlG~LiAf~------~l~~~f~~pi~~L~~~~~~~q 437 (709)
T COG2274 371 KTEKLALILNTIKSLLQQLSSVL---IL----WFGAILVLEGELTLGQLVAFN------MLAGYFISPITRLSQLWTDFQ 437 (709)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH---HH----HHHHHHHhcCCcchHHHHHHH------HHHHHHHhHHHHHHHHHHHHH
Confidence 54444444444333332221111 11 122211 12334666533222 222344467778888888999
Q ss_pred HHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCc
Q 000647 405 RLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSG 483 (1374)
Q Consensus 405 ~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsG 483 (1374)
+...+.+|+.++++.++|.+.+... ...+...+.|+|+||+|.|+.+ .++|+|+||+|++||+++|+|+||||
T Consensus 438 ~~~~~~~rL~dil~~~~E~~~~~~~------~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsG 511 (709)
T COG2274 438 QAKVALERLGDILDTPPEQEGDKTL------IHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSG 511 (709)
T ss_pred HHHHHHHHHHHHhcCCccccccccc------ccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCC
Confidence 9999999999999988765422110 0112235789999999999765 56999999999999999999999999
Q ss_pred hhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHH
Q 000647 484 KSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKN 557 (1374)
Q Consensus 484 KSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~ 557 (1374)
||||+|+|.|+|+|++|+|.+||.+ ..+|++|+||+|++.+|+||++|||.++.+. .+++++.++++.
T Consensus 512 KSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~------~~~e~i~~A~~~ 585 (709)
T COG2274 512 KSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPE------ATDEEIIEAAQL 585 (709)
T ss_pred HHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCC------CCHHHHHHHHHH
Confidence 9999999999999999999999986 3578999999999999999999999998654 567899999999
Q ss_pred cCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhc--CCEEEEEc
Q 000647 558 VDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITIS 632 (1374)
Q Consensus 558 ~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~--~~TiI~vt 632 (1374)
.++++++.++|.++++ +.|.+||||||||++|||||+++|+|+||||||||||+++|+.+++.+.+. |+|+|+||
T Consensus 586 ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~Ia 665 (709)
T COG2274 586 AGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIA 665 (709)
T ss_pred hCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEE
Confidence 9999999999998876 568899999999999999999999999999999999999999999999874 69999999
Q ss_pred cChhhHhhccEEEEecC
Q 000647 633 HRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 633 H~~~~~~~~d~il~l~~ 649 (1374)
||+++++.||+|++|++
T Consensus 666 HRl~ti~~adrIiVl~~ 682 (709)
T COG2274 666 HRLSTIRSADRIIVLDQ 682 (709)
T ss_pred ccchHhhhccEEEEccC
Confidence 99999999999999986
No 21
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.3e-59 Score=583.83 Aligned_cols=529 Identities=19% Similarity=0.201 Sum_probs=380.8
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH----HHH
Q 000647 87 SLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLST----MHS 162 (1374)
Q Consensus 87 ~l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~----~~~ 162 (1374)
.++++++...|.|. ++++.++..+++-.....++.+.+.++++....+.+...+....|.++.++..+ ++.
T Consensus 651 s~~~i~k~~~pe~~-----~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~ 725 (1228)
T KOG0055|consen 651 SFWRIFKLNKPEWP-----YLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNF 725 (1228)
T ss_pred cHHHHHHhccchhH-----HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888888888544 466677778888888889999999999999877765544332223333333333 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCC--CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 163 TSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR--ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTW 240 (1374)
Q Consensus 163 ~~~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~--~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~ 240 (1374)
+..|+-...+. +||.|+|.+-|+++.++++.|||+. .+....|++.|...+...+.+-+..++..+... +...
T Consensus 726 ~q~~~f~~~ge----~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~-~~~i 800 (1228)
T KOG0055|consen 726 LQHYFFGIAGE----KLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAV-IIGI 800 (1228)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 45555555555 6999999999999999999999852 256678999999888777666655555544322 2233
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHH
Q 000647 241 RLCSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKAL 320 (1374)
Q Consensus 241 ~l~~~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~ 320 (1374)
.++++++|.+++++++.+++..+......+.+.+...+..+...+.........+|+.+|+.|+.|++..+.+.+..+..
T Consensus 801 iiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p 880 (1228)
T KOG0055|consen 801 IIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKP 880 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34446677777777666665544433334444444444444444455555666677888999999998775444443332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccc-CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 321 TRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSIS 399 (1374)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 399 (1374)
. +...++.++.++...+-..++....++.+ |+++.+. .+..++... + ..+..+.....+++.....
T Consensus 881 ~---~~~~~~~~i~gl~f~~sqs~~~~~~A~~f----~~G~~Li~~g~~~~~~~--~----~vf~~l~~ta~~~~~~~s~ 947 (1228)
T KOG0055|consen 881 R---KSSFKRGLISGLGFGFSQSLLFFVYALSF----WYGARLISNGEMTFEDV--F----RVFMALSFTAMALGQASSY 947 (1228)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhHHHHhcCCcCHHHH--H----HHHHHHHHHHHHHHHHHhh
Confidence 2 22334444444433221111111111111 2222221 122233221 1 1112222233456666677
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC--CeeeeeeeEEEeCCCEEEEE
Q 000647 400 SRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLIT 477 (1374)
Q Consensus 400 ~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~isl~i~~Ge~~~Iv 477 (1374)
...+.+...++.++++++++++.++.+++ .......-.+.|+++||+|.||.. .++++|+||+|++|+.+|||
T Consensus 948 ~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~-----~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALV 1022 (1228)
T KOG0055|consen 948 APDISKAKIAAGSIFEILDRKPTIDPDST-----SGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALV 1022 (1228)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCCCCCC-----CCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEE
Confidence 77888999999999999998876543210 111111225779999999999964 57999999999999999999
Q ss_pred cCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHH
Q 000647 478 GPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGM 551 (1374)
Q Consensus 478 G~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~ 551 (1374)
|||||||||.+.+|.++|+|++|.|.+||.+ +.+|++|+.|.|+|.||++||||||+||.. ..+.+++
T Consensus 1023 G~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~------~vs~~eI 1096 (1228)
T KOG0055|consen 1023 GPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSE------EVSEEEI 1096 (1228)
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCC------CCCHHHH
Confidence 9999999999999999999999999999976 357899999999999999999999999922 2678899
Q ss_pred HHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCC
Q 000647 552 VELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGT 626 (1374)
Q Consensus 552 ~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~ 626 (1374)
.++++.++.++++..+|.+++| +.|.+||||||||||||||+++||+||||||+|||||.++|+.+.++|.+ .|+
T Consensus 1097 i~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gR 1176 (1228)
T KOG0055|consen 1097 IEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGR 1176 (1228)
T ss_pred HHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCC
Confidence 9999999999999999998887 45789999999999999999999999999999999999999999999986 599
Q ss_pred EEEEEccChhhHhhccEEEEecC
Q 000647 627 SCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 627 TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
|+|+|+||++++++||.|.++++
T Consensus 1177 T~IvIAHRLSTIqnaD~I~Vi~~ 1199 (1228)
T KOG0055|consen 1177 TTIVIAHRLSTIQNADVIAVLKN 1199 (1228)
T ss_pred cEEEEecchhhhhcCCEEEEEEC
Confidence 99999999999999999999986
No 22
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.4e-58 Score=582.00 Aligned_cols=533 Identities=15% Similarity=0.172 Sum_probs=382.1
Q ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFL--RRVPLFFQLISENILLCFLLSTMHSTSK 165 (1374)
Q Consensus 88 l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~--~~~~~f~~~l~~~~~~~~~~~~~~~~~~ 165 (1374)
+++|++.+.|+++ . ++..+++.++...+.+..|.+.+.++|.+.. .+...++. ++++.++..++..+..
T Consensus 10 ~~~l~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 80 (588)
T PRK11174 10 TRWLKQQSKPAKR----W-LNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLP----PFILLILLFVLRALLA 80 (588)
T ss_pred hHHHHHHhHHHHH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHH----HHHHHHHHHHHHHHHH
Confidence 4556667766544 2 5556666778888888999999999998763 22222222 2222223334455666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 166 YITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCS 244 (1374)
Q Consensus 166 yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 244 (1374)
|+...+..+....+..+++.+.+++....+..++++. .++..+|+++|++.+.+.+...+..++..++..+... .++.
T Consensus 81 ~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~-~~l~ 159 (588)
T PRK11174 81 WLRERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLIL-IAVF 159 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 7777777777777888999999999998888887654 5689999999999988887766666555544333322 2334
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 000647 245 YASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHM 324 (1374)
Q Consensus 245 ~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~ 324 (1374)
+++|.+++++++.+++..++..++++...+...+.++..+++........++.+.||.|++|+.+.+++.+..++..+..
T Consensus 160 ~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~ 239 (588)
T PRK11174 160 PINWAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRT 239 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 56787776666555555555556677776666666666677766677777789999999999999988877777666554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCcc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 325 RVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTS--TLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRR 402 (1374)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 402 (1374)
.+..+.......+..++. .+... .++++...++.|.+..+.. +++....+ ....+...++.++..+......
T Consensus 240 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~g~~t~G~l~~~~~~~~~~----~~~~l~~~~~~pl~~l~~~~~~ 313 (588)
T PRK11174 240 MEVLRMAFLSSAVLEFFA-SISIA-LVAVYFGFSYLGELNFGHYGTGVTLFAGF----FVLILAPEFYQPLRDLGTFYHA 313 (588)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHhcccccccccccchHHHHH----HHHHHhHHHHHHHHHHHHHHHH
Confidence 443333222222211111 11110 1101111111233322210 11100101 1112223455677777788888
Q ss_pred HHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCC
Q 000647 403 LNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGS 482 (1374)
Q Consensus 403 l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGs 482 (1374)
+.+...+.+|+.++++.+++... +.. .. ......+.|+|+||+|.|++++++|+|+||+|++||+++|+|||||
T Consensus 314 ~~~~~~~~~ri~~~l~~~~~~~~-~~~----~~-~~~~~~~~i~~~~vsf~~~~~~~vL~~i~l~i~~G~~vaIvG~SGs 387 (588)
T PRK11174 314 KAQAVGAAESLVTFLETPLAHPQ-QGE----KE-LASNDPVTIEAEDLEILSPDGKTLAGPLNFTLPAGQRIALVGPSGA 387 (588)
T ss_pred HHHHHHHHHHHHHHHcCCCcccC-CCc----cc-cCCCCCceEEEEeeEEeccCCCeeeeeeEEEEcCCCEEEEECCCCC
Confidence 99999999999999876542210 000 00 0001134699999998776678899999999999999999999999
Q ss_pred chhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHH
Q 000647 483 GKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLK 556 (1374)
Q Consensus 483 GKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~ 556 (1374)
|||||+++|+|++ |++|+|.+||.+ .+++++|+||||+|++|++||+|||.++.+ ..+++++.++++
T Consensus 388 GKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~------~~~~eei~~al~ 460 (588)
T PRK11174 388 GKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNP------DASDEQLQQALE 460 (588)
T ss_pred CHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCC------CCCHHHHHHHHH
Confidence 9999999999999 899999999965 346789999999999999999999999853 257889999999
Q ss_pred HcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEE
Q 000647 557 NVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITI 631 (1374)
Q Consensus 557 ~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~v 631 (1374)
.++++++++++|.+.++ +.|.+|||||||||+||||++++|+++|||||||+||+++++.+.+.+++ .++|+|+|
T Consensus 461 ~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiI 540 (588)
T PRK11174 461 NAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMV 540 (588)
T ss_pred HhCHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 99999999999987766 46789999999999999999999999999999999999999999998876 48999999
Q ss_pred ccChhhHhhccEEEEecC
Q 000647 632 SHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 632 tH~~~~~~~~d~il~l~~ 649 (1374)
|||++.++.+|+|+++++
T Consensus 541 tHrl~~i~~aD~Iivl~~ 558 (588)
T PRK11174 541 THQLEDLAQWDQIWVMQD 558 (588)
T ss_pred ecChHHHHhCCEEEEEeC
Confidence 999999999999999986
No 23
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-60 Score=566.42 Aligned_cols=198 Identities=32% Similarity=0.403 Sum_probs=164.8
Q ss_pred cEEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCC----ccEEEeCCCC------c-
Q 000647 444 YIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV----SGHIAKPGVG------S- 509 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~----~G~I~~~g~~------~- 509 (1374)
.++++|+++.|... ..+++|+||+|.+||+++|+|.|||||||+.++|.|+.++. +|+|.++|.+ .
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 68999999877542 36999999999999999999999999999999999999987 8999999964 1
Q ss_pred --c-ccccEEEEecCCCC---CcCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCChhHHhc--CCCCccccCCCCCC
Q 000647 510 --D-LNKEIFYVPQRPYT---AVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDR--YPPEKEINWGDELS 580 (1374)
Q Consensus 510 --~-~~~~i~~v~Q~p~l---~~~Tv~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~L~~~~~~--~~~~~~~~~g~~LS 580 (1374)
. ..++|+|+||+|.- +..||.++|.-....... ......+++.++|+.++|.+-..+ +| ++||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yP--------heLS 156 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYP--------HQLS 156 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccCC--------cccC
Confidence 1 23689999999952 335888888642211110 012234567889999999876554 77 6899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 581 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 581 gGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||||+.||+||+.+|++||+||||++||+.++.+|.+.+++ .|+++|+||||+..+. .||++++|.+
T Consensus 157 GG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~ 230 (539)
T COG1123 157 GGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYK 230 (539)
T ss_pred chHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEEC
Confidence 9999999999999999999999999999999999999988764 5999999999999986 6999999985
No 24
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.7e-57 Score=586.17 Aligned_cols=534 Identities=19% Similarity=0.225 Sum_probs=391.7
Q ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYI 167 (1374)
Q Consensus 88 l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl 167 (1374)
++.+++.+.+.++ .++.++++.++...+++..|.+.+.++|.+........ +...++..++..++..+..|+
T Consensus 142 ~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~ 213 (710)
T TIGR03796 142 LRALWRRLRGSRG-----ALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDW---LRPLLLGMGLTALLQGVLTWL 213 (710)
T ss_pred HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhH---HHHHHHHHHHHHHHHHHHHHH
Confidence 3444555544432 24455666777778888999999999998774433221 111222222333445667788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000647 168 TGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYA 246 (1374)
Q Consensus 168 ~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~ 246 (1374)
+..+..+...++..+++.+++++....++++++++ .++..+|+++| +.+.+.+...+...+..++..+.+.+. +.++
T Consensus 214 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~-l~~~ 291 (710)
T TIGR03796 214 QLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALL-MLLY 291 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 88888888888999999999999999999887654 56888999988 566666665555544444444433333 3356
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 000647 247 SPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV 326 (1374)
Q Consensus 247 ~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~ 326 (1374)
+|.+++++++..++..++..++.++..+...+.++..+++.........+++.||.+++|+.+.+++++.+.+..+...+
T Consensus 292 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 371 (710)
T TIGR03796 292 DPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQE 371 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 77777776666655555566677777777777777777777777777788999999999999999999888877776555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 327 VLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRL 406 (1374)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 406 (1374)
..+...+...+..++.. +...+.+++....+..| ..+.|.. ++. ..++..++.++..+.....++...
T Consensus 372 ~~~~~~~~~~~~~~i~~-~~~~~il~~g~~~v~~g-----~lt~G~l--va~----~~l~~~~~~p~~~l~~~~~~~~~~ 439 (710)
T TIGR03796 372 LGVLTQILGVLPTLLTS-LNSALILVVGGLRVMEG-----QLTIGML--VAF----QSLMSSFLEPVNNLVGFGGTLQEL 439 (710)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-----CCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443333333333221 11111111111111223 2355543 221 223344556777788888899999
Q ss_pred HHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCchh
Q 000647 407 SGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKS 485 (1374)
Q Consensus 407 ~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~isl~i~~Ge~~~IvG~sGsGKS 485 (1374)
..+.+|+.++++.+++....................+.|+++||+|.|++ ++++|+|+||+|++||+++|+||||||||
T Consensus 440 ~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKS 519 (710)
T TIGR03796 440 EGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKS 519 (710)
T ss_pred HHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHH
Confidence 99999999998765443211000000000000112357999999999986 46899999999999999999999999999
Q ss_pred HHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcC
Q 000647 486 SLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVD 559 (1374)
Q Consensus 486 TLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~ 559 (1374)
||+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|++|++|||.++.+ ..+++++.++++.++
T Consensus 520 TLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~------~~~~~~i~~al~~~~ 593 (710)
T TIGR03796 520 TIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDP------TIPDADLVRACKDAA 593 (710)
T ss_pred HHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCC------CCCHHHHHHHHHHhC
Confidence 99999999999999999999976 347889999999999999999999998643 257889999999999
Q ss_pred ChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhcCCEEEEEccChh
Q 000647 560 LEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPA 636 (1374)
Q Consensus 560 L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~~~TiI~vtH~~~ 636 (1374)
++++++++|.+.++ +.|.+|||||||||+|||||+++|+++|||||||+||+++|+++++.+++.++|+|+||||++
T Consensus 594 l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~~~~T~IiitHrl~ 673 (710)
T TIGR03796 594 IHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRRRGCTCIIVAHRLS 673 (710)
T ss_pred CHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHhcCCEEEEEecCHH
Confidence 99999999987665 568899999999999999999999999999999999999999999999888999999999999
Q ss_pred hHhhccEEEEecC
Q 000647 637 LVAFHDVVLSLDG 649 (1374)
Q Consensus 637 ~~~~~d~il~l~~ 649 (1374)
.++.+|+|++|++
T Consensus 674 ~i~~~D~Iivl~~ 686 (710)
T TIGR03796 674 TIRDCDEIIVLER 686 (710)
T ss_pred HHHhCCEEEEEeC
Confidence 9999999999986
No 25
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.5e-57 Score=583.49 Aligned_cols=529 Identities=17% Similarity=0.180 Sum_probs=390.9
Q ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYI 167 (1374)
Q Consensus 88 l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl 167 (1374)
++++++.+.+.++ .++.++++.++.+.+++..|.+.+.++|.+....... .+....+..++..++..+..|+
T Consensus 144 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~ 215 (708)
T TIGR01193 144 LLKFIPLITRQKK-----LIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMG---TLGIISIGLIIAYIIQQILSYI 215 (708)
T ss_pred HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555554333 2455566677788888999999999999876443221 1111222222233445667788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000647 168 TGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYA 246 (1374)
Q Consensus 168 ~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~ 246 (1374)
...+..++..++..+++.+++++....++.+++++ .++..+|++ |++.+.+.+...+...+..++..+++... +.++
T Consensus 216 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-l~~~ 293 (708)
T TIGR01193 216 QIFLLNVLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLF-LVRQ 293 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 88888888888999999999999999999988764 568889998 88887776665554444333333333222 3356
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 000647 247 SPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV 326 (1374)
Q Consensus 247 ~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~ 326 (1374)
+|.+++++++.+++..++..++.++..+...+.++..+++...+....+++++||.+++|+.+.+++++.+.+..+...+
T Consensus 294 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 373 (708)
T TIGR01193 294 NMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFK 373 (708)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 77777776666665555666778888888877778888887777777789999999999999999999888877765554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 327 VLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRL 406 (1374)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 406 (1374)
..+.......+..++. .+..++.+++....++.| ..+.|.. ++. ..+...++.++..+.....+++..
T Consensus 374 ~~~~~~~~~~~~~~~~-~~~~i~il~~g~~lv~~g-----~ls~G~l--va~----~~l~~~~~~pl~~l~~~~~~~~~~ 441 (708)
T TIGR01193 374 YQKADQGQQAIKAVTK-LILNVVILWTGAYLVMRG-----KLTLGQL--ITF----NALLSYFLTPLENIINLQPKLQAA 441 (708)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcC-----CCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333322222222221 111111111111111223 3355543 222 223344556777888888899999
Q ss_pred HHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhH
Q 000647 407 SGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSS 486 (1374)
Q Consensus 407 ~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKST 486 (1374)
..+.+|+.++++.+++...... . .......+.|+++||+|.|++++++|+|+||+|++||+++|+|||||||||
T Consensus 442 ~~~~~ri~~~l~~~~e~~~~~~-~-----~~~~~~~~~I~~~~vsf~y~~~~~iL~~isl~i~~G~~vaIvG~SGsGKST 515 (708)
T TIGR01193 442 RVANNRLNEVYLVDSEFINKKK-R-----TELNNLNGDIVINDVSYSYGYGSNILSDISLTIKMNSKTTIVGMSGSGKST 515 (708)
T ss_pred HHHHHHHHHHHcCCCccccccc-c-----cCCCCCCCcEEEEEEEEEcCCCCcceeceeEEECCCCEEEEECCCCCCHHH
Confidence 9999999999876554321100 0 001112457999999999987778999999999999999999999999999
Q ss_pred HHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCC
Q 000647 487 LFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDL 560 (1374)
Q Consensus 487 Ll~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L 560 (1374)
|+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|++||+|||.++... ..+++++.++++.+++
T Consensus 516 LlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~-----~~~~~~i~~a~~~a~l 590 (708)
T TIGR01193 516 LAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKE-----NVSQDEIWAACEIAEI 590 (708)
T ss_pred HHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCC-----CCCHHHHHHHHHHhCC
Confidence 9999999999999999999975 3578899999999999999999999997321 2578899999999999
Q ss_pred hhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh-cCCEEEEEccChh
Q 000647 561 EYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA-MGTSCITISHRPA 636 (1374)
Q Consensus 561 ~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~-~~~TiI~vtH~~~ 636 (1374)
+++++++|.+.++ +.|.+||||||||++||||++++|+++|||||||+||+++++++++.+++ .++|+|+||||++
T Consensus 591 ~~~i~~lp~gldt~i~e~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~~~~T~IiitHr~~ 670 (708)
T TIGR01193 591 KDDIENMPLGYQTELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNLQDKTIIFVAHRLS 670 (708)
T ss_pred HHHHHhcccccCcEecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCEEEEEecchH
Confidence 9999999987665 56889999999999999999999999999999999999999999998876 4799999999999
Q ss_pred hHhhccEEEEecC
Q 000647 637 LVAFHDVVLSLDG 649 (1374)
Q Consensus 637 ~~~~~d~il~l~~ 649 (1374)
.++.+|+|+++++
T Consensus 671 ~~~~~D~i~~l~~ 683 (708)
T TIGR01193 671 VAKQSDKIIVLDH 683 (708)
T ss_pred HHHcCCEEEEEEC
Confidence 9999999999986
No 26
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=9.5e-57 Score=562.86 Aligned_cols=503 Identities=19% Similarity=0.184 Sum_probs=354.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTR 186 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~~ 186 (1374)
++..+++.++.+.+.+..|.+.+.++|.+...+. .+. . ...++..++..++..+..|+...+..+...++..+++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 91 (529)
T TIGR02868 15 LVVAILLGALALGSAVALLGVSAWLISRAAEMPP-VLY-L-SVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVR 91 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566677778888899999999988764432 111 1 111111112233455667777777777777888899999
Q ss_pred HhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 000647 187 YFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMM 265 (1374)
Q Consensus 187 yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i~ 265 (1374)
.+++....+..++++ ..++..+|+++|++.+.+.+...+..++..++..+.+.. ++.+++|.+++++++.+++...+.
T Consensus 92 ~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~l~l~~l~~~~~~~~~~ 170 (529)
T TIGR02868 92 VYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVA-AIALLSVPAALVLAAGLLLAGFVA 170 (529)
T ss_pred HHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999988887765 457999999999999888877766665555544333322 233567777766555444444444
Q ss_pred HHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 266 RNFSPAF-GKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKY 344 (1374)
Q Consensus 266 ~~~~~~l-~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1374)
.++.++. .+...+.++..+++........++.+.|+.|+.|+.+.+++++..++..+...+..+.......+..++. .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 249 (529)
T TIGR02868 171 PLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAA-G 249 (529)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 3444443 3334445556666777777777789999999999999988777766655544333222221111111111 0
Q ss_pred HHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 000647 345 LGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELS 424 (1374)
Q Consensus 345 ~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~ 424 (1374)
+...+.+++....+..| ..+.|.. ++.+ .+...++.++..+......+.....+.+|+.++++.+++..
T Consensus 250 ~~~~~~~~~g~~~~~~g-----~~t~g~l--~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 318 (529)
T TIGR02868 250 LAVLGALWAGGPAVADG-----TLAPATL--AVLV----LLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRP 318 (529)
T ss_pred HHHHHHHHHHHHHHhCC-----CCChhHH--HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcC
Confidence 11111111111111222 2344432 2211 12233445566666667788888999999999987654322
Q ss_pred ccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEe
Q 000647 425 IEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAK 504 (1374)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~ 504 (1374)
..+.. ......+..+.|+++||+|.|++++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+
T Consensus 319 ~~~~~----~~~~~~~~~~~I~~~~vsf~Y~~~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i 394 (529)
T TIGR02868 319 EGVVP----AAGALGLGKPTLELRDLSFGYPGSPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTL 394 (529)
T ss_pred CCCCC----CCcccCCCCceEEEEEEEEecCCCCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 11100 00001112346999999999987678999999999999999999999999999999999999999999999
Q ss_pred CCCC-----ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCC
Q 000647 505 PGVG-----SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWG 576 (1374)
Q Consensus 505 ~g~~-----~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g 576 (1374)
||.+ .+++++|+||||+|++|++||+|||.++.+ +.+++++.++++.++++++++++|.+.++ ++|
T Consensus 395 ~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~------~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 468 (529)
T TIGR02868 395 DGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRP------DATDEELWAALERVGLADWLRSLPDGLDTVLGEGG 468 (529)
T ss_pred CCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCC------CCCHHHHHHHHHHcCCHHHHHhCcccccchhcccc
Confidence 9975 246679999999999999999999999853 25788999999999999999999987766 568
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccCh
Q 000647 577 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRP 635 (1374)
Q Consensus 577 ~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~ 635 (1374)
.+||||||||++||||++++|+++|||||||+||+++|+.+++.+++ .++|+|+||||+
T Consensus 469 ~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 469 ARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 89999999999999999999999999999999999999999999876 489999999995
No 27
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-59 Score=583.50 Aligned_cols=198 Identities=24% Similarity=0.313 Sum_probs=166.7
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC--CccEEEeCCCCc-------cccc
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL--VSGHIAKPGVGS-------DLNK 513 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~--~~G~I~~~g~~~-------~~~~ 513 (1374)
..|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+|+|+|+++| ++|+|.++|.+. ..++
T Consensus 4 ~~l~~~nl~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 4 YLLEMKNITKTFG-GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred ceEEEeeeEEEeC-CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 3689999999985 56899999999999999999999999999999999999996 899999998541 1246
Q ss_pred cEEEEecCCCCCc-CCHHHHhcCCCCCC--cc-cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHH
Q 000647 514 EIFYVPQRPYTAV-GTLRDQLIYPLTSD--QE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 514 ~i~~v~Q~p~l~~-~Tv~eni~~~~~~~--~~-~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
.++||||+|.++. .|++||+.++.... .. ......+++.++++.+++.+..++.+ .+||||||||++|
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGqkqrv~l 154 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV--------GNLGLGQQQLVEI 154 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch--------hhCCHHHHHHHHH
Confidence 7999999998765 59999998874321 00 00112345778899999987666654 5899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||+.+|+++||||||++||+.....+.+.+++ .|+|+|+|||+++.+. .||+++++++
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999887754 4899999999999875 6999999975
No 28
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.7e-56 Score=576.11 Aligned_cols=510 Identities=20% Similarity=0.197 Sum_probs=381.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFL-RRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHT 185 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~-~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~ 185 (1374)
++.++++.++...+++..|...+.++|.+.. ++...++. .++..++..++..+..|++..+..+....+..+++.
T Consensus 138 ~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 213 (686)
T TIGR03797 138 LLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQ----IALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQA 213 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556667788888999999999999998763 33333222 222222233445566777777777777788899999
Q ss_pred HHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 000647 186 RYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTM 264 (1374)
Q Consensus 186 ~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i 264 (1374)
+++++....++.+++++ .++..+|++ |++.+.+.+...+...+..++..+++.+ ++.+++|.+++++++..++..++
T Consensus 214 ~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~l~li~l~~~~~~~~~ 291 (686)
T TIGR03797 214 AVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLG-LMFYYSWKLALVAVALALVAIAV 291 (686)
T ss_pred HHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999887664 468889997 7887777666554444333333333222 23356777776665555555555
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 265 MRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKY 344 (1374)
Q Consensus 265 ~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1374)
..++.+++.+...+.++.+++..........++++||.++.|+.+..++++.+.+..+...+..+...+...+..++. .
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~ 370 (686)
T TIGR03797 292 TLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLP-V 370 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 566777777777777777777777778888899999999999999999998888877766655444433333333221 1
Q ss_pred HHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 000647 345 LGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELS 424 (1374)
Q Consensus 345 ~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~ 424 (1374)
+... .+++...++ ...+..+.|... +. ..++..++.++..+.....+++....+.+|+.++++.+++..
T Consensus 371 ~~~~--~il~~g~~l---v~~g~ltiG~lv--a~----~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 439 (686)
T TIGR03797 371 LTSA--ALFAAAISL---LGGAGLSLGSFL--AF----NTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVD 439 (686)
T ss_pred HHHH--HHHHHHHHH---HHcCCCCHHHHH--HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 1111 111111111 012233565432 21 123344556777888888899999999999999987654322
Q ss_pred ccCCCCCCCCCCCccCCCCcEEEeeeEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEE
Q 000647 425 IEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIA 503 (1374)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~ 503 (1374)
. +. . ......+.|+++||+|.|++ ++++|+|+||+|++||+++|+||||||||||+|+|+|+|+|++|+|.
T Consensus 440 ~-~~-~------~~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 511 (686)
T TIGR03797 440 E-AK-T------DPGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVF 511 (686)
T ss_pred c-Cc-C------CCCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEE
Confidence 1 00 0 00112356999999999964 56899999999999999999999999999999999999999999999
Q ss_pred eCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---c
Q 000647 504 KPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---N 574 (1374)
Q Consensus 504 ~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~ 574 (1374)
+||.+ .+++++|+||||+|++|+||++|||.++.+ .+++++.++++.++++++++++|.+.++ +
T Consensus 512 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-------~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige 584 (686)
T TIGR03797 512 YDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-------LTLDEAWEAARMAGLAEDIRAMPMGMHTVISE 584 (686)
T ss_pred ECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-------CCHHHHHHHHHHcCcHHHHHhccccccccccC
Confidence 99975 346789999999999999999999999743 4678899999999999999999987766 5
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhcCCEEEEEccChhhHhhccEEEEecC
Q 000647 575 WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 575 ~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
.|.+||||||||++||||++++|+++|||||||+||+++|+++++.+++.++|+|+||||++.++.+|+|++|++
T Consensus 585 ~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr~~~i~~~D~Iivl~~ 659 (686)
T TIGR03797 585 GGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERLKVTRIVIAHRLSTIRNADRIYVLDA 659 (686)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecChHHHHcCCEEEEEEC
Confidence 688999999999999999999999999999999999999999999999888999999999999999999999986
No 29
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.3e-56 Score=575.64 Aligned_cols=527 Identities=19% Similarity=0.212 Sum_probs=388.1
Q ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFL-RRVPLFFQLISENILLCFLLSTMHSTSKY 166 (1374)
Q Consensus 88 l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~-~~~~~f~~~l~~~~~~~~~~~~~~~~~~y 166 (1374)
+.++++.+.+.++ .+...+++.++.+.+++..|...+.++|.+.. ++...++. ..+..++..++..+..|
T Consensus 135 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~ 205 (694)
T TIGR03375 135 KHWFWSTLKESWP-----LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWV----LAIGVALAIVFDFVLKT 205 (694)
T ss_pred chHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHH----HHHHHHHHHHHHHHHHH
Confidence 3444555544433 24455666777778888999999999997663 33332222 22222223344566777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000647 167 ITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYA 246 (1374)
Q Consensus 167 l~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~ 246 (1374)
++..+..+....+..+++.+++++....++++.....++..+|+ +|++.+.+.+...+...+..++..+++... +.++
T Consensus 206 ~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~-l~~~ 283 (694)
T TIGR03375 206 LRSYFLDVAGKKADLILSAKLFERVLGLRMEARPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLV-IAII 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHHH
Confidence 77777777777888999999999999988887444567888998 799988877766554444443333333332 3456
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 000647 247 SPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV 326 (1374)
Q Consensus 247 ~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~ 326 (1374)
+|.+++++++..++..++..++.+++.+...+..+.+++..........++++|+.|+.|+.+.+++++.+.+..+...+
T Consensus 284 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR03375 284 GGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLK 363 (694)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHH
Confidence 77777776666665555666677888888777778888888777778889999999999999999998888877666555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 327 VLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRL 406 (1374)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 406 (1374)
..+.......+..++.. +..+..+++....++.| ..+.|.. ++. ..++..++.++..+.....++...
T Consensus 364 ~~~~~~~~~~~~~~~~~-~~~~~il~~g~~~v~~g-----~ls~G~l--~a~----~~~~~~~~~p~~~l~~~~~~~~~~ 431 (694)
T TIGR03375 364 SRFLSNLATNFAQFIQQ-LVSVAIVVVGVYLISDG-----ELTMGGL--IAC----VMLSGRALAPLGQLAGLLTRYQQA 431 (694)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-----CCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43333332222222211 11111111111111223 3355543 222 223344556777777788889999
Q ss_pred HHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchh
Q 000647 407 SGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKS 485 (1374)
Q Consensus 407 ~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKS 485 (1374)
..+.+|+.++++.+++....... .......+.|+++||+|.||++ +++|+|+||+|++||+++|+||||||||
T Consensus 432 ~~~~~ri~~il~~~~e~~~~~~~------~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKS 505 (694)
T TIGR03375 432 KTALQSLDELMQLPVERPEGTRF------LHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKS 505 (694)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCC------CCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHH
Confidence 99999999998765432211000 0001123579999999999854 6799999999999999999999999999
Q ss_pred HHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcC
Q 000647 486 SLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVD 559 (1374)
Q Consensus 486 TLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~ 559 (1374)
||+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|++|++|||.++.+. .+++++.++++.++
T Consensus 506 TLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~------~~~~~i~~a~~~~~ 579 (694)
T TIGR03375 506 TLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPY------ADDEEILRAAELAG 579 (694)
T ss_pred HHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCC------CCHHHHHHHHHHcC
Confidence 99999999999999999999975 3567899999999999999999999997532 57889999999999
Q ss_pred ChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccC
Q 000647 560 LEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHR 634 (1374)
Q Consensus 560 L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~ 634 (1374)
++++++++|.+.++ ++|.+||||||||++||||++++|+++|||||||+||+++++.+++.+++ .++|+|+||||
T Consensus 580 l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHr 659 (694)
T TIGR03375 580 VTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHR 659 (694)
T ss_pred hHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecC
Confidence 99999999987665 56889999999999999999999999999999999999999999999876 47999999999
Q ss_pred hhhHhhccEEEEecC
Q 000647 635 PALVAFHDVVLSLDG 649 (1374)
Q Consensus 635 ~~~~~~~d~il~l~~ 649 (1374)
++.++.||+|++|++
T Consensus 660 l~~~~~~D~iivl~~ 674 (694)
T TIGR03375 660 TSLLDLVDRIIVMDN 674 (694)
T ss_pred HHHHHhCCEEEEEeC
Confidence 999999999999986
No 30
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.3e-56 Score=563.48 Aligned_cols=530 Identities=17% Similarity=0.206 Sum_probs=383.6
Q ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 86 KSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSK 165 (1374)
Q Consensus 86 ~~l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~ 165 (1374)
+.++++++.+.+.++ . ++..+++.++.....+..+.+.+.++|.+...+...+...+ .+..++..++..+..
T Consensus 11 ~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~ 82 (582)
T PRK11176 11 QTFRRLWPTIAPFKA----G-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWM---PLVVIGLMILRGITS 82 (582)
T ss_pred HHHHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHH---HHHHHHHHHHHHHHH
Confidence 334455555554322 2 33444555666667777888999999987754433332211 111222233344555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 166 YITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCS 244 (1374)
Q Consensus 166 yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 244 (1374)
|+...+..+....+...++.+++++....+..++++ ..++..+|+++|++.+.+.+...+..++..++..+.+... +.
T Consensus 83 ~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~-l~ 161 (582)
T PRK11176 83 FISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIM-MF 161 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 666666666666677788888888888878776654 4568999999999998887777666666655544443322 33
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 000647 245 YASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHM 324 (1374)
Q Consensus 245 ~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~ 324 (1374)
+.+|.+++++++.+++..++..++.+++.+...+.++..+++.........+.++|+.|+.|+.+.+++++..++..+..
T Consensus 162 ~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~ 241 (582)
T PRK11176 162 YYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQG 241 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 45777766666555554555556777777777777777777777777777899999999999999998888888877766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 325 RVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLN 404 (1374)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 404 (1374)
.+..+...+...+..++.. +.....+++.....+.| ..+.|...++ ..++..++.++..+......++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~~g-----~is~g~~~~~------~~~~~~~~~pl~~l~~~~~~~~ 309 (582)
T PRK11176 242 MKMVSASSISDPIIQLIAS-LALAFVLYAASFPSVMD-----TLTAGTITVV------FSSMIALMRPLKSLTNVNAQFQ 309 (582)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-----CCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 5554444333333332211 11111111111111223 2355543221 2233445567777778888899
Q ss_pred HHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCc
Q 000647 405 RLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSG 483 (1374)
Q Consensus 405 ~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsG 483 (1374)
....+.+|+.++++.+++...... ...+..+.++++||+|.||++ +++|+|+||+|++||+++|+||||||
T Consensus 310 ~~~~~~~ri~~~~~~~~~~~~~~~--------~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsG 381 (582)
T PRK11176 310 RGMAACQTLFAILDLEQEKDEGKR--------VIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSG 381 (582)
T ss_pred HHHHHHHHHHHHhcCCCcCCCCCc--------CCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCC
Confidence 999999999998765433211000 001123469999999999864 68999999999999999999999999
Q ss_pred hhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHH
Q 000647 484 KSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKN 557 (1374)
Q Consensus 484 KSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~ 557 (1374)
||||+++|+|+++|++|+|.++|.+ .++++.|+||||+|++|++|++|||.++.+. ..++++++++++.
T Consensus 382 KSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~-----~~~~~~i~~al~~ 456 (582)
T PRK11176 382 KSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTE-----QYSREQIEEAARM 456 (582)
T ss_pred HHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCC-----CCCHHHHHHHHHH
Confidence 9999999999999999999999975 2467889999999999999999999997532 2578899999999
Q ss_pred cCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEc
Q 000647 558 VDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITIS 632 (1374)
Q Consensus 558 ~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vt 632 (1374)
++++++++++|.+.++ +.|.+||||||||++||||++++|+++|||||||+||++++..+++.+++ .++|+|+||
T Consensus 457 ~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~Vt 536 (582)
T PRK11176 457 AYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIA 536 (582)
T ss_pred hCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 9999999999987665 56889999999999999999999999999999999999999999998876 479999999
Q ss_pred cChhhHhhccEEEEecC
Q 000647 633 HRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 633 H~~~~~~~~d~il~l~~ 649 (1374)
||++.++.+|+|+++++
T Consensus 537 Hr~~~~~~~D~Ii~l~~ 553 (582)
T PRK11176 537 HRLSTIEKADEILVVED 553 (582)
T ss_pred cchHHHHhCCEEEEEEC
Confidence 99999999999999986
No 31
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-59 Score=587.43 Aligned_cols=200 Identities=23% Similarity=0.295 Sum_probs=164.3
Q ss_pred CCcEEEeeeEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC----------
Q 000647 442 ANYIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------- 508 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~---~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~---------- 508 (1374)
.+.|+++|+++.|++ +.++++|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|..
T Consensus 10 ~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~ 89 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIE 89 (623)
T ss_pred CceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccc
Confidence 347999999999863 2479999999999999999999999999999999999999999999987631
Q ss_pred ------c---cc-cccEEEEecCC--CCCc-CCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCCh---hHHhcCCCCc
Q 000647 509 ------S---DL-NKEIFYVPQRP--YTAV-GTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE---YLLDRYPPEK 571 (1374)
Q Consensus 509 ------~---~~-~~~i~~v~Q~p--~l~~-~Tv~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~L~---~~~~~~~~~~ 571 (1374)
. .+ +++|+||+|+| .++. .|+.||+.++.... ........+++.++++.++|. +..++.|
T Consensus 90 ~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~--- 166 (623)
T PRK10261 90 LSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQTILSRYP--- 166 (623)
T ss_pred cccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChhhHHhCCC---
Confidence 0 11 24799999998 4544 69999998763211 100111235678899999995 3456665
Q ss_pred cccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEE
Q 000647 572 EINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLS 646 (1374)
Q Consensus 572 ~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~ 646 (1374)
.+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.+++ .|+|+|+||||++.+ ..||+|++
T Consensus 167 -----~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~v 241 (623)
T PRK10261 167 -----HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLV 241 (623)
T ss_pred -----ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEE
Confidence 68999999999999999999999999999999999999998887653 389999999999987 57999999
Q ss_pred ecC
Q 000647 647 LDG 649 (1374)
Q Consensus 647 l~~ 649 (1374)
|++
T Consensus 242 l~~ 244 (623)
T PRK10261 242 MYQ 244 (623)
T ss_pred eeC
Confidence 985
No 32
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-58 Score=577.11 Aligned_cols=197 Identities=24% Similarity=0.248 Sum_probs=166.1
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-c------ccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D------LNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-~------~~~~i~ 516 (1374)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+- . .++.++
T Consensus 5 ~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 83 (510)
T PRK09700 5 YISMAGIGKSFG-PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIG 83 (510)
T ss_pred eEEEeeeEEEcC-CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeE
Confidence 689999999985 46799999999999999999999999999999999999999999999998541 1 235699
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCC----cc---cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHH
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSD----QE---VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~----~~---~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1374)
||||++.++. .|++||+.++.... .. ......+++.++++.+++.+..++.+ .+||||||||++
T Consensus 84 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgG~~qrv~ 155 (510)
T PRK09700 84 IIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV--------ANLSISHKQMLE 155 (510)
T ss_pred EEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch--------hhCCHHHHHHHH
Confidence 9999998766 59999998764211 00 00012345778899999987766655 689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 589 lARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||||+.+|+++||||||++||+.+...+++.+++ .|+|+|+|||+++.+. .||+++++++
T Consensus 156 ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 156 IAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999887754 4899999999999875 7999999975
No 33
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.3e-58 Score=574.49 Aligned_cols=197 Identities=25% Similarity=0.352 Sum_probs=166.3
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------c-ccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~-~~~~i~ 516 (1374)
.|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+. . .++.++
T Consensus 4 ~i~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 82 (501)
T PRK10762 4 LLQLKGIDKAFP-GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIG 82 (501)
T ss_pred eEEEeeeEEEeC-CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEE
Confidence 589999999985 46799999999999999999999999999999999999999999999998541 1 245799
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCCcc---c-CCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSDQE---V-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~~~---~-~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1374)
|+||+|.++. .|++||+.++...... . .....+++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 83 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~ 154 (501)
T PRK10762 83 IIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV--------GELSIGEQQMVEIAK 154 (501)
T ss_pred EEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch--------hhCCHHHHHHHHHHH
Confidence 9999987765 5999999986432100 0 0011245778899999987766655 589999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 592 al~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||+++|+++||||||++||+.+...+++.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 155 VLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred HHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999999877654 5889999999999875 7999999975
No 34
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=9.9e-56 Score=559.44 Aligned_cols=514 Identities=19% Similarity=0.235 Sum_probs=387.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTR 186 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~~ 186 (1374)
++..+++.++...+.+..+.+.+.+++......... .+....++.++..++..+..|+...+..+...++...++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~ 92 (571)
T TIGR02203 16 LVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRS---VLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVR 92 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566677778888888999999888766543222 12222222333344456677777777777777888889999
Q ss_pred HhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 000647 187 YFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMM 265 (1374)
Q Consensus 187 yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i~ 265 (1374)
++++....+.+++++. .++..+|+++|++.+.+.+...+..++..++..+.+.. ++.+.+|.+++++++..++..++.
T Consensus 93 l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~l~~i~l~~~~l~~~~~ 171 (571)
T TIGR02203 93 MFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFI-VLLYYSWQLTLIVVVMLPVLSILM 171 (571)
T ss_pred HHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9998888887777654 56889999999999988887776666655554444332 233567777777666666655566
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 266 RNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYL 345 (1374)
Q Consensus 266 ~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (1374)
.++.++..+...+.++.++++.........+.++|+.+++|+.+.+++++.+++..+...+..+.......+..++.. +
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 250 (571)
T TIGR02203 172 RRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIAS-L 250 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 677788877877888888888888888889999999999999999888888887776655544443333333332211 1
Q ss_pred HHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 000647 346 GATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSI 425 (1374)
Q Consensus 346 ~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~ 425 (1374)
...+.+++....+..|. .+.|....+ ..++..++.++..+......+.....+.+|+.++++.+++.+.
T Consensus 251 ~~~~~~~~g~~~~~~g~-----lt~g~l~a~------~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 319 (571)
T TIGR02203 251 ALAVVLFIALFQAQAGS-----LTAGDFTAF------ITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDT 319 (571)
T ss_pred HHHHHHHHHHHHHHcCC-----CCHhHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 11111111111122232 355543222 2234455677778888888999999999999998865443211
Q ss_pred cCCCCCCCCCCCccCCCCcEEEeeeEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEe
Q 000647 426 EDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAK 504 (1374)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~ 504 (1374)
.. .. .....+.++++||+|+|++ ++++|+|+||++++||+++|+|+||||||||+++|+|+|+|++|+|.+
T Consensus 320 ~~------~~--~~~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i 391 (571)
T TIGR02203 320 GT------RA--IERARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILL 391 (571)
T ss_pred CC------CC--CCCCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEE
Confidence 00 00 0112346999999999975 467999999999999999999999999999999999999999999999
Q ss_pred CCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cC
Q 000647 505 PGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NW 575 (1374)
Q Consensus 505 ~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~ 575 (1374)
+|.+ .+++++++||||+|++|++|++|||.++.+. +.+++++.++++.++++++++++|.+.++ ++
T Consensus 392 ~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~-----~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~ 466 (571)
T TIGR02203 392 DGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTE-----QADRAEIERALAAAYAQDFVDKLPLGLDTPIGEN 466 (571)
T ss_pred CCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCC-----CCCHHHHHHHHHHcChHHHHHhCcCcccceecCC
Confidence 9965 3467889999999999999999999998531 25788999999999999999999877655 57
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 576 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 576 g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
|.+||||||||++||||++++|++++||||||+||+++++.+++.+++ .++|+|+||||++.++.||+|+++++
T Consensus 467 g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~ 542 (571)
T TIGR02203 467 GVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDD 542 (571)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeC
Confidence 889999999999999999999999999999999999999999998876 47999999999999999999999975
No 35
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.9e-55 Score=558.06 Aligned_cols=532 Identities=17% Similarity=0.165 Sum_probs=375.9
Q ss_pred cccchHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cChhHHHHHHHHHHHHHHHHHH
Q 000647 81 KKGGLKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFL-RRVPLFFQLISENILLCFLLST 159 (1374)
Q Consensus 81 ~~~~~~~l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~-~~~~~f~~~l~~~~~~~~~~~~ 159 (1374)
|++-||.++++++...++++ . ++..+++.++.+.+.+..|.+.+.++|.+.. .+.+. ..++.++++.++..+
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~--~~~~~~~~~~~~~~~ 76 (592)
T PRK10790 4 FSQLWPTLKRLLAYGSPWRK----P-LGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPL--GLVAGLAAAYVGLQL 76 (592)
T ss_pred chhhHHHHHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch--hHHHHHHHHHHHHHH
Confidence 44445655666655544332 2 4455666778888888999999999998754 33222 111212222222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 160 MHSTSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLY 238 (1374)
Q Consensus 160 ~~~~~~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~ 238 (1374)
+..+..|+...+..+....+..+++.+++++....+.+++++. .++..+|+++|++.+.+.+...+..++..++..+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~ 156 (592)
T PRK10790 77 LAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAM 156 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777777778888999999998888888777654 568889999999998887777666655554433332
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHH
Q 000647 239 TWRLCSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFK 318 (1374)
Q Consensus 239 ~~~l~~~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~ 318 (1374)
. .++.+++|.+++++++..++..++..+..+...+...+.++..+++........++.+.|+.|+.|+.+.+++.+..+
T Consensus 157 ~-~~~~~~~~~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~ 235 (592)
T PRK10790 157 L-VAMFSLDWRMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASR 235 (592)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHH
Confidence 2 223345666665554444333333333444444444444555556666667777789999999999998887777666
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 319 ALTRHMRVVLHDHW-WFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLS 397 (1374)
Q Consensus 319 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~ 397 (1374)
+..+...+..+... ....+..++...+ .++++++ .|....+..+.|.. ++. ..+...+..++..+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~g~is~g~l--~a~----~~~~~~~~~pl~~l~ 302 (592)
T PRK10790 236 SHYMARMQTLRLDGFLLRPLLSLFSALI--LCGLLML-----FGFSASGTIEVGVL--YAF----ISYLGRLNEPLIELT 302 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH-----HHHHHCCCcCHHHH--HHH----HHHHHHHHHHHHHHH
Confidence 55443332222111 1111111111111 0111111 11111223345432 221 223344556777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEE
Q 000647 398 ISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLIT 477 (1374)
Q Consensus 398 ~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~Iv 477 (1374)
.....+.....+++|+.++++.+++.. ... ......+.++++||+|.||+++++|+|+||++++||+++|+
T Consensus 303 ~~~~~~~~~~~s~~ri~~~l~~~~~~~-~~~--------~~~~~~~~i~~~~v~f~y~~~~~il~~i~l~i~~Ge~iaIv 373 (592)
T PRK10790 303 TQQSMLQQAVVAGERVFELMDGPRQQY-GND--------DRPLQSGRIDIDNVSFAYRDDNLVLQNINLSVPSRGFVALV 373 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccC-CCC--------ccCCCCCeEEEEEEEEEeCCCCceeeceeEEEcCCCEEEEE
Confidence 788899999999999999886543211 000 00112356999999999987678999999999999999999
Q ss_pred cCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHH
Q 000647 478 GPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGM 551 (1374)
Q Consensus 478 G~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~ 551 (1374)
|+||||||||+++|+|+|+|++|+|.+||.+ ..++++|+||||+|++|++|++|||.++.. .+++++
T Consensus 374 G~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~-------~~d~~i 446 (592)
T PRK10790 374 GHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRD-------ISEEQV 446 (592)
T ss_pred CCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCC-------CCHHHH
Confidence 9999999999999999999999999999975 356789999999999999999999999741 467899
Q ss_pred HHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCC
Q 000647 552 VELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGT 626 (1374)
Q Consensus 552 ~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~ 626 (1374)
.++++.++++++++++|.+.++ +.|.+||||||||++|||||+++|+++|||||||+||+++++.+.+.+++ .++
T Consensus 447 ~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~ 526 (592)
T PRK10790 447 WQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHT 526 (592)
T ss_pred HHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999987665 45789999999999999999999999999999999999999999998876 479
Q ss_pred EEEEEccChhhHhhccEEEEecC
Q 000647 627 SCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 627 TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
|+|+||||++.++.+|+|++|++
T Consensus 527 tvIivtHr~~~l~~~D~ii~l~~ 549 (592)
T PRK10790 527 TLVVIAHRLSTIVEADTILVLHR 549 (592)
T ss_pred EEEEEecchHHHHhCCEEEEEEC
Confidence 99999999999999999999986
No 36
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.9e-58 Score=576.82 Aligned_cols=198 Identities=26% Similarity=0.378 Sum_probs=162.7
Q ss_pred cEEEeeeEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc------
Q 000647 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------ 509 (1374)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~------ 509 (1374)
.++++|+++.|++ ++++++|+||+|++||+++|+||||||||||+|+|+|+++| ++|+|.++|.+-
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 6899999999964 25799999999999999999999999999999999999987 799999998641
Q ss_pred c---cc-ccEEEEecCCC--CC-cCCHHHHhcCCCCC-CcccCCCCHHHHHHHHHHcCChh---HHhcCCCCccccCCCC
Q 000647 510 D---LN-KEIFYVPQRPY--TA-VGTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDE 578 (1374)
Q Consensus 510 ~---~~-~~i~~v~Q~p~--l~-~~Tv~eni~~~~~~-~~~~~~~~~~~~~~~l~~~~L~~---~~~~~~~~~~~~~g~~ 578 (1374)
+ .+ ++++|+||+|. ++ ..|+++|+.++... .........+++.++++.++|.+ ..++.+ .+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~--------~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYP--------HQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCC--------cc
Confidence 1 12 47999999985 33 35899998643210 00011112356788999999975 346655 68
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 579 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 579 LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||||||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||+|++|++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~ 232 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQN 232 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999999999999999888764 3899999999999875 7999999985
No 37
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.3e-58 Score=575.19 Aligned_cols=196 Identities=26% Similarity=0.320 Sum_probs=162.1
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCC--cCCccEEEeCC----------------
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPG---------------- 506 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~--~~~~G~I~~~g---------------- 506 (1374)
|+++|+++.|+ ++++++|+||++++||+++|+||||||||||+|+|+|+. +|++|+|.+++
T Consensus 1 l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g 79 (520)
T TIGR03269 1 IEVKNLTKKFD-GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVG 79 (520)
T ss_pred CEEEEEEEEEC-CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccccc
Confidence 46899999985 568999999999999999999999999999999999997 79999999862
Q ss_pred -------CC----------------ccccccEEEEecC-CCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh
Q 000647 507 -------VG----------------SDLNKEIFYVPQR-PYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE 561 (1374)
Q Consensus 507 -------~~----------------~~~~~~i~~v~Q~-p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~ 561 (1374)
.+ ..+++.++|+||+ +.++. .|++||+.++...........++++.++++.++++
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 159 (520)
T TIGR03269 80 EPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQLS 159 (520)
T ss_pred cccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh
Confidence 10 0124579999998 45554 59999998753211111111235678899999999
Q ss_pred hHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhh
Q 000647 562 YLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPAL 637 (1374)
Q Consensus 562 ~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~ 637 (1374)
+..++.+ .+||||||||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|+||||++.
T Consensus 160 ~~~~~~~--------~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~ 231 (520)
T TIGR03269 160 HRITHIA--------RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEV 231 (520)
T ss_pred hhhhcCc--------ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHH
Confidence 8888766 68999999999999999999999999999999999999998776643 48999999999998
Q ss_pred Hh-hccEEEEecC
Q 000647 638 VA-FHDVVLSLDG 649 (1374)
Q Consensus 638 ~~-~~d~il~l~~ 649 (1374)
+. .||+++.|++
T Consensus 232 ~~~~~d~i~~l~~ 244 (520)
T TIGR03269 232 IEDLSDKAIWLEN 244 (520)
T ss_pred HHHhcCEEEEEeC
Confidence 85 7999999975
No 38
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-58 Score=571.15 Aligned_cols=197 Identities=21% Similarity=0.313 Sum_probs=166.3
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-------cccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-------~~~~~i~ 516 (1374)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .++++++
T Consensus 4 ~l~~~~l~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i~ 82 (501)
T PRK11288 4 YLSFDGIGKTFP-GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGVA 82 (501)
T ss_pred eEEEeeeEEEEC-CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCEE
Confidence 689999999985 46799999999999999999999999999999999999999999999988541 1356799
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCC--c-ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSD--Q-EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~--~-~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1374)
|+||+|.++. .|++||+.++.... . .......+++.++++.+++.+..++.+ .+||||||||++||||
T Consensus 83 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGq~qrv~lara 154 (501)
T PRK11288 83 IIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL--------KYLSIGQRQMVEIAKA 154 (501)
T ss_pred EEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch--------hhCCHHHHHHHHHHHH
Confidence 9999998776 49999999864211 0 000112346778899999876555544 5899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 593 l~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 155 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 155 LARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred HHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999887764 5899999999999874 6999999975
No 39
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.1e-55 Score=556.89 Aligned_cols=528 Identities=17% Similarity=0.159 Sum_probs=367.5
Q ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 86 KSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSK 165 (1374)
Q Consensus 86 ~~l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~ 165 (1374)
+.++++++.+.+.+ ..+...+++.++...+++..|.+.+.++|.+.... .+...++.++++ .++..+..
T Consensus 5 ~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~--~~~~~~~~~~~~----~~~~~~~~ 73 (588)
T PRK13657 5 RLYARVLQYLGAEK-----RLGILLAVANVLLAAATFAEPILFGRIIDAISGKG--DIFPLLAAWAGF----GLFNIIAG 73 (588)
T ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cHHHHHHHHHHH----HHHHHHHH
Confidence 34555655543322 23555666778888899999999999999877542 222222222221 12222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 166 YITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCS 244 (1374)
Q Consensus 166 yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 244 (1374)
|+...+..+....+..+++.+++++....+..++++ ..++..+|+++|++.+.+.....+...+..++..++.. .++.
T Consensus 74 ~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 152 (588)
T PRK13657 74 VLVARHADRLAHRRRLAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLL-PLAL 152 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 333333333333344444556677777777766654 45689999999999987776666666555544333222 2233
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 000647 245 YASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHM 324 (1374)
Q Consensus 245 ~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~ 324 (1374)
+.+|.+++++++.+++...+..++.+...+...+.++..+++........++.+.|+.|+.++.+.+++.+..+++.+..
T Consensus 153 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~ 232 (588)
T PRK13657 153 FMNWRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQ 232 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 56776666655555444445555666666666666666677777777777789999999999999988888888777665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 325 RVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLN 404 (1374)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 404 (1374)
.+..+..........+.. .+.....+++....++.|. .+.|....+ ..++..++.++..+......+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~v~~g~-----lt~g~~~a~------~~l~~~~~~~l~~l~~~~~~~~ 300 (588)
T PRK13657 233 MPVLSWWALASVLNRAAS-TITMLAILVLGAALVQKGQ-----LRVGEVVAF------VGFATLLIGRLDQVVAFINQVF 300 (588)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCC-----cCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 544333333222222211 1111111111111122333 355543221 2233345556667777777788
Q ss_pred HHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCch
Q 000647 405 RLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGK 484 (1374)
Q Consensus 405 ~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGK 484 (1374)
......+|+.++++.+++.+.... ........+.|+++||+|.||+++++|+|+||++++||+++|+|+|||||
T Consensus 301 ~~~~~~~~i~~l~~~~~~~~~~~~------~~~~~~~~~~I~~~~vsf~y~~~~~iL~~inl~i~~G~~v~IvG~sGsGK 374 (588)
T PRK13657 301 MAAPKLEEFFEVEDAVPDVRDPPG------AIDLGRVKGAVEFDDVSFSYDNSRQGVEDVSFEAKPGQTVAIVGPTGAGK 374 (588)
T ss_pred HHHHHHHHHHHHhCCCcccCCCCC------CCCcCCCCCeEEEEEEEEEeCCCCceecceeEEECCCCEEEEECCCCCCH
Confidence 888888888888765432210000 00001113469999999999866779999999999999999999999999
Q ss_pred hHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHc
Q 000647 485 SSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNV 558 (1374)
Q Consensus 485 STLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~ 558 (1374)
|||+++|+|+|+|++|+|.+||.+ .+++++|+||||+|++|++|++|||.++.+ ..+++++.++++.+
T Consensus 375 STLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~------~~~d~~i~~al~~~ 448 (588)
T PRK13657 375 STLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRP------DATDEEMRAAAERA 448 (588)
T ss_pred HHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCC------CCCHHHHHHHHHHh
Confidence 999999999999999999999965 346789999999999999999999999743 24678899999999
Q ss_pred CChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEcc
Q 000647 559 DLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISH 633 (1374)
Q Consensus 559 ~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH 633 (1374)
+++++++++|.+.++ ++|.+||||||||++|||||+++|+++|||||||+||+++++.+++.+++ .++|+|+|||
T Consensus 449 ~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitH 528 (588)
T PRK13657 449 QAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAH 528 (588)
T ss_pred CHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEe
Confidence 999999999876655 46789999999999999999999999999999999999999999998875 4799999999
Q ss_pred ChhhHhhccEEEEecC
Q 000647 634 RPALVAFHDVVLSLDG 649 (1374)
Q Consensus 634 ~~~~~~~~d~il~l~~ 649 (1374)
|++.++.+|+|+++++
T Consensus 529 r~~~~~~~D~ii~l~~ 544 (588)
T PRK13657 529 RLSTVRNADRILVFDN 544 (588)
T ss_pred cHHHHHhCCEEEEEEC
Confidence 9999999999999976
No 40
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=2.8e-55 Score=549.58 Aligned_cols=510 Identities=18% Similarity=0.202 Sum_probs=369.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAF-LR-RVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIH 184 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~-~~-~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~ 184 (1374)
++..+++.++...+++..|.+.+.++|.+. .. +...+.. ++++.++..++..+..|+...+..+....+..+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLP----ALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666678888899999999999999874 32 2222222 22223333344556677777777777777888999
Q ss_pred HHHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 000647 185 TRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGT 263 (1374)
Q Consensus 185 ~~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~ 263 (1374)
.+.+++....+..++++ ..++..+|+++|++.+.+.+...+..++..++..+.+.. ++.+.+|.+++++++.+++...
T Consensus 81 ~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILA-AVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHH
Confidence 99999988888877765 456899999999999887776655555544443333222 2234566666555544444444
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 264 MMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLK 343 (1374)
Q Consensus 264 i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1374)
+..++.++..+...+.++.++++........++.+.|+.|+.|+.+.+++++..++..+...+..+.....+....++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA- 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 4455666666666666667777777777777889999999999999988887777666654443333333333222221
Q ss_pred HHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 000647 344 YLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISREL 423 (1374)
Q Consensus 344 ~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~ 423 (1374)
.+...+.+++.....+.| ..+.|.. +.. ..+...++.++..+......+.+...+.+|+.++++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~g-----~~t~g~~--~~~----~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~ 307 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAG-----DLDLATG--LFV----LLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPL 307 (529)
T ss_pred HHHHHHHHHHHHHHHHcC-----CCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 111111111111111222 2355532 221 22333455666777777888999999999999998643221
Q ss_pred cccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEE
Q 000647 424 SIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHI 502 (1374)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I 502 (1374)
. +.. . ......+.|+++||+|.||++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|
T Consensus 308 ~--~~~-----~-~~~~~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I 379 (529)
T TIGR02857 308 A--GKA-----P-VTAAPAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSI 379 (529)
T ss_pred C--CCc-----C-CCCCCCCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE
Confidence 1 000 0 001112469999999999875 479999999999999999999999999999999999999999999
Q ss_pred EeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---
Q 000647 503 AKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI--- 573 (1374)
Q Consensus 503 ~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~--- 573 (1374)
.+||.+ .+++++++||||+|++|++|++|||.++.+. .+++++.++++.++++++++++|.+.++
T Consensus 380 ~~~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~------~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~ 453 (529)
T TIGR02857 380 AVNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPD------ASDAEIRRALERAGLDEFVAALPQGLDTLIG 453 (529)
T ss_pred EECCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCC------CCHHHHHHHHHHcCcHHHHHhCcccccchhc
Confidence 999975 3467899999999999999999999997532 4678899999999999999999977665
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEe
Q 000647 574 NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSL 647 (1374)
Q Consensus 574 ~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l 647 (1374)
++|.+||||||||++||||++++|+++|||||||+||+++++.+++.+++ .++|+|+||||++.++.+|+|++|
T Consensus 454 e~g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 454 EGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 46889999999999999999999999999999999999999999998876 589999999999999999999875
No 41
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.5e-55 Score=550.74 Aligned_cols=528 Identities=19% Similarity=0.212 Sum_probs=376.7
Q ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCh--hHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAF-LRRV--PLFFQLISENILLCFLLSTMHSTS 164 (1374)
Q Consensus 88 l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~-~~~~--~~f~~~l~~~~~~~~~~~~~~~~~ 164 (1374)
++++++.+.|.++ .++..+++.++....++..+.+.+.++|... .... ..+.. ++ ..+.+++..++..+.
T Consensus 4 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 76 (574)
T PRK11160 4 LLPFLKLYKRHWF-----MLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNY-ML-PAAGVRGAAIGRTAG 76 (574)
T ss_pred hHHHHHHHhhhhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHH-Hh-HHHHHHHHHHHHHHH
Confidence 3445555555433 2455566677777888899999999999754 2221 11111 11 111222223345566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLC 243 (1374)
Q Consensus 165 ~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 243 (1374)
.|+...+..+.-..+..+++.+.+++....+..++++ ..++..+|+++|++.+.+.+...+..++..++..+... .++
T Consensus 77 ~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~-~~l 155 (574)
T PRK11160 77 RYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLT-IGL 155 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 7777777777777788899999999999888887765 45689999999999998888777776666555443332 233
Q ss_pred HhhhhhHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHH
Q 000647 244 SYASPKYVFWILAYVLGAGTMM-RNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTR 322 (1374)
Q Consensus 244 ~~~~~~l~~~~l~~~~~~~~i~-~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~ 322 (1374)
.+++|.+++++++.+++...++ .++.+...+...+.++..+++.........+.+.|+.|+.|+.+.+++++..++..+
T Consensus 156 ~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~ 235 (574)
T PRK11160 156 SFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLA 235 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 4678877776654444333332 334455555666667777788777777777999999999999999888887777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 323 HMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRR 402 (1374)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 402 (1374)
...+..+.......+..++. ...+..+++ +++....+..+.|.. ++.+.+. ....+..+..+......
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~----~g~~~~~g~~t~g~l--~a~~~~~---~~~~~~~~~~l~~~~~~ 303 (574)
T PRK11160 236 AQRRQANLTGLSQALMILAN---GLTVVLMLW----LAAGGVGGNAQPGAL--IALFVFA---ALAAFEALMPVAGAFQH 303 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHH----HHHHHhccccchhHH--HHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 55544333322222222111 111111111 111111122344432 2211111 11223344555566778
Q ss_pred HHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCC
Q 000647 403 LNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNG 481 (1374)
Q Consensus 403 l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sG 481 (1374)
+.+...+.+|+.++++.+++....... ......+.|+++||+|.||++ +++|+|+||++++||+++|+||||
T Consensus 304 ~~~~~~s~~ri~~ll~~~~~~~~~~~~-------~~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sG 376 (574)
T PRK11160 304 LGQVIASARRINEITEQKPEVTFPTTS-------TAAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTG 376 (574)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCccc-------CCCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCC
Confidence 888899999999998765432111000 001123569999999999864 679999999999999999999999
Q ss_pred CchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHH
Q 000647 482 SGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELL 555 (1374)
Q Consensus 482 sGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l 555 (1374)
||||||+++|+|+++|++|+|.+||.+ .+++++|+||||+|++|++|++|||.++.+ ..+++++.+++
T Consensus 377 sGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~------~~~~~~i~~al 450 (574)
T PRK11160 377 CGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAP------NASDEALIEVL 450 (574)
T ss_pred CCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCC------ccCHHHHHHHH
Confidence 999999999999999999999999975 246788999999999999999999999753 25778999999
Q ss_pred HHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEE
Q 000647 556 KNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCIT 630 (1374)
Q Consensus 556 ~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~ 630 (1374)
+.+++++++++ |.+.++ +.|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+++ .++|+|+
T Consensus 451 ~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tvii 529 (574)
T PRK11160 451 QQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLM 529 (574)
T ss_pred HHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999 988776 46789999999999999999999999999999999999999999999875 4899999
Q ss_pred EccChhhHhhccEEEEecC
Q 000647 631 ISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 631 vtH~~~~~~~~d~il~l~~ 649 (1374)
||||++.++.+|+|+++++
T Consensus 530 itHr~~~~~~~d~i~~l~~ 548 (574)
T PRK11160 530 ITHRLTGLEQFDRICVMDN 548 (574)
T ss_pred EecChhHHHhCCEEEEEeC
Confidence 9999999999999999986
No 42
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-57 Score=562.95 Aligned_cols=191 Identities=21% Similarity=0.264 Sum_probs=162.1
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCCC
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYT 524 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~l 524 (1374)
|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+|+|+|+.+|++|+|.++|. ..++|+||++.+
T Consensus 2 l~i~~ls~~~~-~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----~~i~~~~q~~~~ 75 (530)
T PRK15064 2 LSTANITMQFG-AKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----ERLGKLRQDQFA 75 (530)
T ss_pred EEEEEEEEEeC-CcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----CEEEEEeccCCc
Confidence 78999999985 568999999999999999999999999999999999999999999999873 469999999877
Q ss_pred Cc-CCHHHHhcCCCCC-------------Cccc-------------------CCCCHHHHHHHHHHcCChhHHh-cCCCC
Q 000647 525 AV-GTLRDQLIYPLTS-------------DQEV-------------------EPLTHGGMVELLKNVDLEYLLD-RYPPE 570 (1374)
Q Consensus 525 ~~-~Tv~eni~~~~~~-------------~~~~-------------------~~~~~~~~~~~l~~~~L~~~~~-~~~~~ 570 (1374)
+. .|++||+.++... .... ....+.++.++++.+++.+... +.+
T Consensus 76 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-- 153 (530)
T PRK15064 76 FEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLM-- 153 (530)
T ss_pred CCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCch--
Confidence 65 5999999875310 0000 0011345678888999876443 333
Q ss_pred ccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhcCCEEEEEccChhhHh-hccEEEEecC
Q 000647 571 KEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 571 ~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
.+||||||||++|||||+.+|+++||||||++||+.+.+.+.+.+++.|.|||+|||+++.+. .||++++|++
T Consensus 154 ------~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~~ 227 (530)
T PRK15064 154 ------SEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLDY 227 (530)
T ss_pred ------hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEeC
Confidence 589999999999999999999999999999999999999999999888999999999999875 6899999985
No 43
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=6.4e-58 Score=568.94 Aligned_cols=196 Identities=23% Similarity=0.328 Sum_probs=162.5
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC--CccEEEeCCCCc-------cccccE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL--VSGHIAKPGVGS-------DLNKEI 515 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~--~~G~I~~~g~~~-------~~~~~i 515 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+. ..++.+
T Consensus 2 l~i~~l~~~~~-~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (500)
T TIGR02633 2 LEMKGIVKTFG-GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGI 80 (500)
T ss_pred EEEEeEEEEeC-CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCE
Confidence 78999999985 46799999999999999999999999999999999999987 799999998541 123579
Q ss_pred EEEecCCCCCc-CCHHHHhcCCCCCCc----ccCCCCHHHHHHHHHHcCChhHH-hcCCCCccccCCCCCChhHHHHHHH
Q 000647 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLL-DRYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 516 ~~v~Q~p~l~~-~Tv~eni~~~~~~~~----~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
+||||+|.++. .|++||+.++..... .......+++.++++.+++.+.. ++.+ .+||||||||++|
T Consensus 81 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LSgG~~qrv~i 152 (500)
T TIGR02633 81 VIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPV--------GDYGGGQQQLVEI 152 (500)
T ss_pred EEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCch--------hhCCHHHHHHHHH
Confidence 99999997765 599999988643110 00011234567889999987543 2323 5899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||+++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 153 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~ 216 (500)
T TIGR02633 153 AKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRD 216 (500)
T ss_pred HHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999887654 5899999999999875 6999999975
No 44
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6.7e-55 Score=550.00 Aligned_cols=509 Identities=23% Similarity=0.297 Sum_probs=372.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTR 186 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~~ 186 (1374)
+...+++.++...+++..+.+.+.+++.+. .+...+.......+++.++..++.....|+...+. ..+...++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~~~~~lr~~ 90 (567)
T COG1132 16 LLLAILLLLLSALLSLLLPLLIGRIIDALL-ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLG----QKIVADLRRD 90 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 445566667778889999999999999888 44444444444333333333334444445555554 5688889999
Q ss_pred HhhccccccccccCCCC-CChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 000647 187 YFENMAYYKISHVDGRI-THPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMM 265 (1374)
Q Consensus 187 yl~~~~~y~~~~~d~~~-~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i~ 265 (1374)
.+++....+..++++.. ++..+|+++|++.+...+......+..+++..+. ...++...+|.+++++++..++..++.
T Consensus 91 ~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~l~~~~~~~~~~~~~ 169 (567)
T COG1132 91 LFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIG-SLVLLFSLSWRLALILLLILPLLALVL 169 (567)
T ss_pred HHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 99999999988887654 7999999999999887777663333333332222 223334567777777666555556666
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 266 RNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYL 345 (1374)
Q Consensus 266 ~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (1374)
.++++...+...+.++..++.........++.+.|+.|+.|+.+.+++.+..++..+...+..+..........++ .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 246 (567)
T COG1132 170 SLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLL---S 246 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 6666655666666666667777667777778899999999999977666665555444332222222222111111 1
Q ss_pred HHHHHHHHhhhh--hhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 000647 346 GATVAVILIIEP--FFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISREL 423 (1374)
Q Consensus 346 ~~~~~~il~~~~--~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~ 423 (1374)
......++.... +..+. .+.|. ++. +..++...+.++..+......+.+...+++|+.++++.+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~-----~~~g~--~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~ 315 (567)
T COG1132 247 SLGTVLVLALGGFLVLSGS-----LTVGA--LAA----FILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEV 315 (567)
T ss_pred HHHHHHHHHHHHHHHHcCC-----CCHhH--HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 111111111111 11222 23443 222 233445566677788888888889999999999999875543
Q ss_pred cccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEE
Q 000647 424 SIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIA 503 (1374)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~ 503 (1374)
...... .....+.|+|+||+|.|++++++++|+||++++||+++|+||||||||||+++|+|+|+|++|+|.
T Consensus 316 ~~~~~~--------~~~~~~~I~f~~vsf~y~~~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~ 387 (567)
T COG1132 316 EDPPDP--------LKDTIGSIEFENVSFSYPGKKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEIL 387 (567)
T ss_pred cCCCCC--------CCCCCCeEEEEEEEEEcCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEE
Confidence 211100 112245699999999998778999999999999999999999999999999999999999999999
Q ss_pred eCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---c
Q 000647 504 KPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---N 574 (1374)
Q Consensus 504 ~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~ 574 (1374)
+||.+ .++|++|+||||+|++|++||+|||.|+.+. .+++++.++++.+++++++.++|.+.++ +
T Consensus 388 idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~------at~eei~~a~k~a~~~d~I~~lp~g~dt~vge 461 (567)
T COG1132 388 IDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPD------ATDEEIEEALKLANAHEFIANLPDGYDTIVGE 461 (567)
T ss_pred ECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCC------CCHHHHHHHHHHhChHHHHHhCcccccceecC
Confidence 99875 3578999999999999999999999998653 5789999999999999999999977665 3
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 575 WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 575 ~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
.|.+||||||||++||||++++|+++|||||||+||+++|+.+.+.+++ .++|+|+|+||++.++.+|+|+++++
T Consensus 462 ~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~ 538 (567)
T COG1132 462 RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDN 538 (567)
T ss_pred CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEEC
Confidence 5789999999999999999999999999999999999999999998864 57899999999999999999999986
No 45
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.5e-56 Score=561.50 Aligned_cols=193 Identities=21% Similarity=0.331 Sum_probs=161.8
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCC
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRP 522 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p 522 (1374)
..|+++|+++.|++++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ ..+++||||+|
T Consensus 5 ~~l~i~~l~~~y~~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-----~~~i~~v~Q~~ 79 (556)
T PRK11819 5 YIYTMNRVSKVVPPKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-----GIKVGYLPQEP 79 (556)
T ss_pred EEEEEeeEEEEeCCCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----CCEEEEEecCC
Confidence 3699999999996357899999999999999999999999999999999999999999999875 24799999999
Q ss_pred CCCc-CCHHHHhcCCCCCC--------------cccC----------------------CCCHHHHHHHHHHcCChhHHh
Q 000647 523 YTAV-GTLRDQLIYPLTSD--------------QEVE----------------------PLTHGGMVELLKNVDLEYLLD 565 (1374)
Q Consensus 523 ~l~~-~Tv~eni~~~~~~~--------------~~~~----------------------~~~~~~~~~~l~~~~L~~~~~ 565 (1374)
.++. .|+.||+.++.... .... ...+.++.++++.+++.. .+
T Consensus 80 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~ 158 (556)
T PRK11819 80 QLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCPP-WD 158 (556)
T ss_pred CCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCCc-cc
Confidence 8876 49999998753100 0000 001234566777777743 33
Q ss_pred cCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhcCCEEEEEccChhhHh-hccEE
Q 000647 566 RYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVV 644 (1374)
Q Consensus 566 ~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~~~TiI~vtH~~~~~~-~~d~i 644 (1374)
+.+ .+||||||||++|||||+.+|+++||||||++||+.+...+.+.+++.+.|+|+|||+++.+. .+|+|
T Consensus 159 ~~~--------~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i 230 (556)
T PRK11819 159 AKV--------TKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWI 230 (556)
T ss_pred Cch--------hhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeE
Confidence 333 589999999999999999999999999999999999999999999887789999999999885 68999
Q ss_pred EEecC
Q 000647 645 LSLDG 649 (1374)
Q Consensus 645 l~l~~ 649 (1374)
++|++
T Consensus 231 ~~l~~ 235 (556)
T PRK11819 231 LELDR 235 (556)
T ss_pred EEEeC
Confidence 99985
No 46
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4.2e-56 Score=556.09 Aligned_cols=258 Identities=22% Similarity=0.313 Sum_probs=222.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCC-ccccccc
Q 000647 1040 SQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQ 1118 (1374)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~ 1118 (1374)
++....+..+.+...++.++..+.+|+.++.+.+++.+.+ ..+... +..+|+|+|+||+|+|+. ++++|+|
T Consensus 420 ~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~-----~~~~~~---~~~~g~I~~~nvsf~y~~~~~~vL~~ 491 (709)
T COG2274 420 GYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGD-----KTLIHL---PKLQGEIEFENVSFRYGPDDPPVLED 491 (709)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc-----cccccc---cccCceEEEEEEEEEeCCCCcchhhc
Confidence 3444566677788888899999999999998765432221 111122 224899999999998866 4789999
Q ss_pred ceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCC
Q 000647 1119 LTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPL 1196 (1374)
Q Consensus 1119 ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~ 1196 (1374)
+||+|+|||+|||||+||||||||+++|.|+|+|.+|+|.+||.|+.++ +.+|++|++|||||+||+|||||||..+.
T Consensus 492 isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~ 571 (709)
T COG2274 492 LSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGN 571 (709)
T ss_pred eeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999998 57899999999999999999999998654
Q ss_pred ChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHh
Q 000647 1197 SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQL 1275 (1374)
Q Consensus 1197 ~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~ 1275 (1374)
+ +..|+++.++++..+.++++.++|.||||.+ +.|.+|||||||||+|
T Consensus 572 p----------------------~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlal--------- 620 (709)
T COG2274 572 P----------------------EATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLAL--------- 620 (709)
T ss_pred C----------------------CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHH---------
Confidence 3 2346677777778888889999999999998 5789999999999999
Q ss_pred hhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhh
Q 000647 1276 CSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPF 1353 (1374)
Q Consensus 1276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~ 1353 (1374)
||||++|||||||||||||||.++|+.+++.+.+ .|+|+|.||||+++++.
T Consensus 621 ---------------------------ARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~ 673 (709)
T COG2274 621 ---------------------------ARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRS 673 (709)
T ss_pred ---------------------------HHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhh
Confidence 9999999999999999999999999998876554 47999999999999999
Q ss_pred ccceEEEEcC
Q 000647 1354 HSLELRLIDG 1363 (1374)
Q Consensus 1354 ~~~~l~l~~g 1363 (1374)
.|+++.+..|
T Consensus 674 adrIiVl~~G 683 (709)
T COG2274 674 ADRIIVLDQG 683 (709)
T ss_pred ccEEEEccCC
Confidence 9999999554
No 47
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.4e-56 Score=571.11 Aligned_cols=463 Identities=21% Similarity=0.234 Sum_probs=310.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHHH----Hhh
Q 000647 809 AASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVT----GMV 883 (1374)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~----~~~ 883 (1374)
++..++.....++..+...+...+++..++++.++.+ .||+..+ ..+..+|+++|++.+...+...+. .++
T Consensus 212 ~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~----~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~ 287 (711)
T TIGR00958 212 IASSVSAGLRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDENK----TGELTSRLSSDTQTMSRSLSLNVNVLLRNLV 287 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCC----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444555555666667777777777764 6776432 245789999999988765443222 222
Q ss_pred H---hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCc
Q 000647 884 K---PSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGG 960 (1374)
Q Consensus 884 ~---~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~ 960 (1374)
. .++.+++++|+++++.. ..+.++.++. +...+...+...+.++..+.+.......-.+.+++..|+.+
T Consensus 288 ~~i~~~~~l~~~s~~l~l~~l----~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e 359 (711)
T TIGR00958 288 MLLGLLGFMLWLSPRLTMVTL----INLPLVFLAE----KVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAE 359 (711)
T ss_pred HHHHHHHHHHHHhHHHHHHHH----HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhccc
Confidence 2 22334556777665531 1111111111 11112222333333333333333333344467889999877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHHHHH
Q 000647 961 AREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASV 1038 (1374)
Q Consensus 961 ~~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~a~~ 1038 (1374)
..|.+.+++..++..+................. +...+...+.++++.. ..+.. +.|.+...+ .+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~il~~g~~lv~~g~i----t~G~lva~~----~~ 426 (711)
T TIGR00958 360 EGEASRFKEALEETLQLNKRKALAYAGYLWTTS-----VLGMLIQVLVLYYGGQLVLTGKV----SSGNLVSFL----LY 426 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCC----CHHHHHHHH----HH
Confidence 766665555544444332211111111111111 1111111112222221 11211 223332222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCC--ccccc
Q 000647 1039 VSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS--QKLLA 1116 (1374)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~--~~~vL 1116 (1374)
..+....+..+.....++.+...+.+|++++.+..++.++ ... ...++ .+|.|+|+||+|.||+ ++++|
T Consensus 427 ~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~-----~~~-~~~~~---~~~~I~~~nVsf~Y~~~~~~~vL 497 (711)
T TIGR00958 427 QEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPL-----TGT-LAPLN---LEGLIEFQDVSFSYPNRPDVPVL 497 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-----CCC-CCCCC---CCCeEEEEEEEEECCCCCCCccc
Confidence 3345556667777788888888999999999765322111 010 01111 2578999999999997 36899
Q ss_pred ccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhcc
Q 000647 1117 RQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIY 1194 (1374)
Q Consensus 1117 ~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~y 1194 (1374)
+|+||+|+|||+++||||||||||||+++|.|+|+|.+|+|.+||+|++++ +.+|++|++|||||++|+|||||||.|
T Consensus 498 ~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~ 577 (711)
T TIGR00958 498 KGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAY 577 (711)
T ss_pred cCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhc
Confidence 999999999999999999999999999999999999999999999999988 467889999999999999999999998
Q ss_pred CCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhH
Q 000647 1195 PLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLI 1273 (1374)
Q Consensus 1195 p~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~ 1273 (1374)
+.+ +..|++++++++.++++++++++|+|+||.+ ++|.+|||||||||||
T Consensus 578 g~~----------------------~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlal------- 628 (711)
T TIGR00958 578 GLT----------------------DTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAI------- 628 (711)
T ss_pred CCC----------------------CCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHH-------
Confidence 853 1346778899999999999999999999997 4789999999999999
Q ss_pred HhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchhh
Q 000647 1274 QLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPF 1353 (1374)
Q Consensus 1274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~~~~TvI~IaHRl~~i~~ 1353 (1374)
|||++|+|+|+||||||||||.++|+.+++.....++|+|+||||+++++.
T Consensus 629 -----------------------------ARALl~~p~ILILDEpTSaLD~~te~~i~~~~~~~~~TvIiItHrl~~i~~ 679 (711)
T TIGR00958 629 -----------------------------ARALVRKPRVLILDEATSALDAECEQLLQESRSRASRTVLLIAHRLSTVER 679 (711)
T ss_pred -----------------------------HHHHhcCCCEEEEEccccccCHHHHHHHHHhhccCCCeEEEEeccHHHHHh
Confidence 999999999999999999999999999988333468999999999999999
Q ss_pred ccceEEEEcC
Q 000647 1354 HSLELRLIDG 1363 (1374)
Q Consensus 1354 ~~~~l~l~~g 1363 (1374)
+|+++.|.+|
T Consensus 680 aD~IivL~~G 689 (711)
T TIGR00958 680 ADQILVLKKG 689 (711)
T ss_pred CCEEEEEECC
Confidence 9999999654
No 48
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.1e-54 Score=547.75 Aligned_cols=515 Identities=20% Similarity=0.243 Sum_probs=374.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAF-LRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHT 185 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~-~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~ 185 (1374)
+...+++.++...+++..|...+.++|.+. +.+...+...+. +.++..++..+..|+...+..+....+..+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 95 (576)
T TIGR02204 20 VLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFA----FLLVVALVLALGTAARFYLVTWLGERVVADIRR 95 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566677888888999999999999844 444333332222 122222233444555566666666667778888
Q ss_pred HHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 000647 186 RYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTM 264 (1374)
Q Consensus 186 ~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i 264 (1374)
..+++....+..++++ ..++..+|+++|++.+.+.+...+..++..++..+.+.. ++.+++|.+++++++..++..++
T Consensus 96 ~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~l~~~~ 174 (576)
T TIGR02204 96 AVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLI-MMFITSPKLTSLVLLAVPLVLLP 174 (576)
T ss_pred HHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHH
Confidence 8888877777776654 456888999999999877776666555444443333222 22345676666665555555555
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 265 MRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKY 344 (1374)
Q Consensus 265 ~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1374)
..++.++..+...+.++.++++...+....++++.|+.++.|+.+..++++.+++..+...+..+...+......++. +
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 253 (576)
T TIGR02204 175 ILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLV-F 253 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 566777887888888888888888889999999999999999999988888888776665544333332222222111 1
Q ss_pred HHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 000647 345 LGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELS 424 (1374)
Q Consensus 345 ~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~ 424 (1374)
+.....+++....++.|. .+.|....+ ..+...++.++..+.....++.....+.+|+.++++.+++..
T Consensus 254 ~~~~~~~~~g~~~v~~g~-----lt~g~~~~~------~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 322 (576)
T TIGR02204 254 GAIVGVLWVGAHDVIAGK-----MSAGTLGQF------VFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIK 322 (576)
T ss_pred HHHHHHHHHHHHHHHcCC-----CCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCC
Confidence 111111111111122333 345532221 123334556777888888999999999999999987544321
Q ss_pred ccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC--CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEE
Q 000647 425 IEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHI 502 (1374)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~--~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I 502 (1374)
..... . ....+..+.|+++||+|.||++ +++|+|+||++++||+++|+||||||||||+++|+|+|+|++|+|
T Consensus 323 ~~~~~-~----~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I 397 (576)
T TIGR02204 323 APAHP-K----TLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRI 397 (576)
T ss_pred CCCCC-c----cCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE
Confidence 11000 0 0001113469999999999853 679999999999999999999999999999999999999999999
Q ss_pred EeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---
Q 000647 503 AKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI--- 573 (1374)
Q Consensus 503 ~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~--- 573 (1374)
.+||.+ .+++++|+|+||+|++|++|++|||.++.+. .+++++.++++.+++.++++++|.+.++
T Consensus 398 ~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~------~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~ 471 (576)
T TIGR02204 398 LLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPD------ATDEEVEAAARAAHAHEFISALPEGYDTYLG 471 (576)
T ss_pred EECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCC------CCHHHHHHHHHHcCcHHHHHhCCCCCCceeC
Confidence 999964 3466789999999999999999999997532 3578899999999999999999876554
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 574 NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 574 ~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
++|.+||||||||++||||++++|+++|||||||+||+++++.+++.+++ .++|+|+||||++.++.+|+++++++
T Consensus 472 ~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~ 549 (576)
T TIGR02204 472 ERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQ 549 (576)
T ss_pred CCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEEC
Confidence 56889999999999999999999999999999999999999999998876 48999999999999999999999986
No 49
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.9e-57 Score=560.03 Aligned_cols=194 Identities=22% Similarity=0.373 Sum_probs=167.5
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------c-ccccE
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEI 515 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~-~~~~i 515 (1374)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. + .+..+
T Consensus 10 ~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 10 PLLCARSISKQYS-GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred ceEEEEeEEEEeC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 3699999999995 46799999999999999999999999999999999999999999999998531 1 12469
Q ss_pred EEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 516 ~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
+|+||++.++. .|++||+.++.... ....+++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKR----QASMQKMKQLLAALGCQLDLDSSA--------GSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccc----hHHHHHHHHHHHHcCCCccccCCh--------hhCCHHHHHHHHHHHHHH
Confidence 99999998776 49999999864321 122456788999999987776655 589999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999888764 4899999999999874 7999999975
No 50
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=5.9e-54 Score=541.25 Aligned_cols=526 Identities=15% Similarity=0.126 Sum_probs=376.8
Q ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 88 LQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYI 167 (1374)
Q Consensus 88 l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl 167 (1374)
++++++.+.|+++ .++..+++.++.+.+.+..|...+.++|.+..++. .... +++.++..++..+..|+
T Consensus 7 ~~~l~~~l~~~k~-----~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~ 75 (585)
T TIGR01192 7 YVRALSYLNVHKN-----RVLLIVIANITLAAITIAEPILFGRIIDAISSKSD--VLPT----LALWAGFGVFNTIAYVL 75 (585)
T ss_pred HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--HHHH----HHHHHHHHHHHHHHHHH
Confidence 4556666655433 25556677788888999999999999998775432 1111 11111223344556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000647 168 TGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYA 246 (1374)
Q Consensus 168 ~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~ 246 (1374)
..++..+....+..+++.+.+++....++++++++ .++..+|+++|++.+.+.+...+...+..++..+++.+ .+.++
T Consensus 76 ~~~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 154 (585)
T TIGR01192 76 VAREADRLAHGRRATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIP-TAFAM 154 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 66666666666777777888999998898887654 57899999999999887777776666555554433322 23356
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 000647 247 SPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRV 326 (1374)
Q Consensus 247 ~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~ 326 (1374)
+|.+++++++.+++...+..++.++..+...+.++..+++........+++++|+.|+.|+.+.+++++..++..+...+
T Consensus 155 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (585)
T TIGR01192 155 DWRLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYP 234 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 88777776665555555556666766666655566666666666667778999999999999998888887776655444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 327 VLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRL 406 (1374)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 406 (1374)
..+.......+..++. .+...+.+++....+..| ..+.|.. ++. ..++..++.++..+......+...
T Consensus 235 ~~~~~~~~~~~~~~~~-~~~~~~v~~~g~~~v~~g-----~it~g~l--~a~----~~~~~~l~~~~~~l~~~~~~~~~~ 302 (585)
T TIGR01192 235 VLDWWALASGLNRMAS-TISMMCILVIGTVLVIKG-----ELSVGEV--IAF----IGFANLLIGRLDQMSGFITQIFEA 302 (585)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcC-----CCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332222222211111 111111111111111223 2345532 221 122334445666677777788888
Q ss_pred HHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhH
Q 000647 407 SGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSS 486 (1374)
Q Consensus 407 ~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKST 486 (1374)
....+|+.++++.+++....... .......+.++++||+|.|++++++++|+||++++||+++|+|||||||||
T Consensus 303 ~~~~~ri~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~v~~~y~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKST 376 (585)
T TIGR01192 303 RAKLEDFFDLEDSVFQREEPADA------PELPNVKGAVEFRHITFEFANSSQGVFDVSFEAKAGQTVAIVGPTGAGKTT 376 (585)
T ss_pred HHHHHHHHHHHcCCccccCCccC------CCCCCCCCeEEEEEEEEECCCCCccccceeEEEcCCCEEEEECCCCCCHHH
Confidence 89999999987654332110000 000111346999999999987677999999999999999999999999999
Q ss_pred HHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCC
Q 000647 487 LFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDL 560 (1374)
Q Consensus 487 Ll~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L 560 (1374)
|+++|+|+++|++|+|.++|.+ .++++.++||||+|++|++|++|||.++.+. .+++++.++++.+++
T Consensus 377 L~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~------~~~~~~~~a~~~~~~ 450 (585)
T TIGR01192 377 LINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREG------ATDEEVYEAAKAAAA 450 (585)
T ss_pred HHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCC------CCHHHHHHHHHHhCc
Confidence 9999999999999999999864 2467889999999999999999999997432 467789999999999
Q ss_pred hhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccCh
Q 000647 561 EYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRP 635 (1374)
Q Consensus 561 ~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~ 635 (1374)
++++.++|.+.++ +.|.+||||||||++|||||+++|+++|||||||+||+++++.+++.+++ .++|+|+||||+
T Consensus 451 ~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~ 530 (585)
T TIGR01192 451 HDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRL 530 (585)
T ss_pred HHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcCh
Confidence 9999988876554 56789999999999999999999999999999999999999999998875 489999999999
Q ss_pred hhHhhccEEEEecC
Q 000647 636 ALVAFHDVVLSLDG 649 (1374)
Q Consensus 636 ~~~~~~d~il~l~~ 649 (1374)
+.++.+|+|+++++
T Consensus 531 ~~~~~~d~i~~l~~ 544 (585)
T TIGR01192 531 STVRNADLVLFLDQ 544 (585)
T ss_pred HHHHcCCEEEEEEC
Confidence 99999999999986
No 51
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-57 Score=560.50 Aligned_cols=194 Identities=24% Similarity=0.301 Sum_probs=161.6
Q ss_pred EeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-------cccccEEEEe
Q 000647 447 FSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIFYVP 519 (1374)
Q Consensus 447 ~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-------~~~~~i~~v~ 519 (1374)
++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++.++|+|
T Consensus 1 ~~nl~~~~~-~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~ 79 (491)
T PRK10982 1 MSNISKSFP-GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMVH 79 (491)
T ss_pred CCceEEEeC-CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEe
Confidence 368888885 46799999999999999999999999999999999999999999999998641 1246799999
Q ss_pred cCCCCCc-CCHHHHhcCCCCCC-cc--cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 520 QRPYTAV-GTLRDQLIYPLTSD-QE--VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 520 Q~p~l~~-~Tv~eni~~~~~~~-~~--~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
|++.++. .|++||+.++.... .. ......+++.++++.+++.+..++.+ .+||||||||++|||||++
T Consensus 80 q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 80 QELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV--------ATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred cccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch--------hhCCHHHHHHHHHHHHHHh
Confidence 9997665 59999998764211 10 00111245678889999876666544 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~ 209 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRD 209 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999887754 5899999999999875 7999999975
No 52
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-54 Score=500.74 Aligned_cols=526 Identities=20% Similarity=0.238 Sum_probs=372.0
Q ss_pred HHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Q 000647 92 AAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCF--LLSTMHSTSKYITG 169 (1374)
Q Consensus 92 l~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~--~~~~~~~~~~yl~~ 169 (1374)
++.+.|+++ ++ +.+.+.+++.++....+..+=.+.|.|+.+-.-......+.. ++-.+. ...+...+.+|...
T Consensus 5 ~p~i~l~~~-~~-~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~---~~p~a~VR~~aI~Rt~~RY~ER 79 (573)
T COG4987 5 LPYLRLYKR-HK-FGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNV---MLPSAGVRGLAILRTAARYVER 79 (573)
T ss_pred hHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 366677666 22 334445555566666677888889999876543332211111 111111 12234577899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccC-CCCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 000647 170 TLSLQFRKIVTKLIHTRYFENMAYYKISHVD-GRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASP 248 (1374)
Q Consensus 170 ~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d-~~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~ 248 (1374)
..+-.+--++..++|-+.|++..--...... -+.++.-.|+++||+.+.+.+...+.+.+.+++.+....+.+. ++++
T Consensus 80 lvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~-f~~~ 158 (573)
T COG4987 80 LVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLS-FFSI 158 (573)
T ss_pred HhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHH-HhhH
Confidence 9999988889999999999887655443332 3567899999999999999999999887777665544444443 4677
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Q 000647 249 KYVFWILAYVLGAGTMMRNFSPAFGK-LMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVV 327 (1374)
Q Consensus 249 ~l~~~~l~~~~~~~~i~~~~~~~l~~-l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~ 327 (1374)
.+.+.+.++..+..+++.++....++ .+.+..+..+.+|...........+..+||.++..++.+++.-....+..++.
T Consensus 159 ~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~ 238 (573)
T COG4987 159 PLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQ 238 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666555555555555555544444 34455566667776554444455556899999998876665555544444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000647 328 LHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLS-ISSRRLNRL 406 (1374)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~~~ 406 (1374)
.+...+.+ ++..++...+... ...|+++....+..+. -...+. .-+++..+.++..+. .....+.+.
T Consensus 239 ~~~~~~~~----a~~~l~~g~~v~~--~l~w~a~~~~~G~~~~-~~aa~~-----ll~~f~~~eaf~~L~~~A~~~lgq~ 306 (573)
T COG4987 239 ARFTGLSD----AILLLIAGLLVIG--LLLWMAAQVGAGALAQ-PGAALA-----LLVIFAALEAFEPLAPGAFQHLGQV 306 (573)
T ss_pred HHHHHHHH----HHHHHHHHHHHHH--HHHHHHhcCcCCCcch-hHHHHH-----HHHHHHHHHHHhhhcchhHHHhhHH
Confidence 33332222 2222222111110 1112333332222111 011111 112234455555555 556788888
Q ss_pred HHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCC-eeeeeeeEEEeCCCEEEEEcCCCCchh
Q 000647 407 SGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGN-VLVENLTLKVEPGSNLLITGPNGSGKS 485 (1374)
Q Consensus 407 ~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~-~~l~~isl~i~~Ge~~~IvG~sGsGKS 485 (1374)
..++.|+.++.+.+++...+++. .......++++||+|.||+.+ ++|+|+||++++||+++|+|+||||||
T Consensus 307 ~~Sa~Rl~~i~~q~~e~~~~~~~--------~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKS 378 (573)
T COG4987 307 IASARRLNDILDQKPEVTFPDEQ--------TATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKS 378 (573)
T ss_pred HHHHHHHhhhccCCcccCCCccc--------cCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHH
Confidence 89999999888766654322110 001112799999999999865 799999999999999999999999999
Q ss_pred HHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcC
Q 000647 486 SLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVD 559 (1374)
Q Consensus 486 TLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~ 559 (1374)
||+++|.|.|+|++|+|..+|.+ +++++.|++++|++++|.+|+|||+....++ .+|+++.++++++|
T Consensus 379 TllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~------AsDEel~~aL~qvg 452 (573)
T COG4987 379 TLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPD------ASDEELWAALQQVG 452 (573)
T ss_pred HHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCC------CCHHHHHHHHHHcC
Confidence 99999999999999999999965 3467799999999999999999999997653 68999999999999
Q ss_pred ChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccC
Q 000647 560 LEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHR 634 (1374)
Q Consensus 560 L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~ 634 (1374)
|+++++..|.+.++ +-|..||||||||+||||+|+++.+++||||||.|||+.+|+++++.+.+ .|+|+|+||||
T Consensus 453 L~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHr 532 (573)
T COG4987 453 LEKLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHR 532 (573)
T ss_pred HHHHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecc
Confidence 99999999876554 56889999999999999999999999999999999999999999998876 59999999999
Q ss_pred hhhHhhccEEEEecC
Q 000647 635 PALVAFHDVVLSLDG 649 (1374)
Q Consensus 635 ~~~~~~~d~il~l~~ 649 (1374)
+..++.+|+|+++++
T Consensus 533 L~~le~~drIivl~~ 547 (573)
T COG4987 533 LRGLERMDRIIVLDN 547 (573)
T ss_pred cccHhhcCEEEEEEC
Confidence 999999999999986
No 53
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=8.6e-56 Score=554.76 Aligned_cols=201 Identities=21% Similarity=0.331 Sum_probs=158.1
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCC
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 523 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~ 523 (1374)
.++++|+++.|++++++++|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.+++ +..|+||||+|.
T Consensus 4 ~i~~~nls~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----~~~i~~v~Q~~~ 78 (552)
T TIGR03719 4 IYTMNRVSKVVPPKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----GIKVGYLPQEPQ 78 (552)
T ss_pred EEEEeeEEEecCCCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----CCEEEEEeccCC
Confidence 689999999996457899999999999999999999999999999999999999999999875 247999999998
Q ss_pred CCc-CCHHHHhcCCCCCC--------------cccCCC------CHHHHHHHHHHcCChh-------HHhcCCCCccccC
Q 000647 524 TAV-GTLRDQLIYPLTSD--------------QEVEPL------THGGMVELLKNVDLEY-------LLDRYPPEKEINW 575 (1374)
Q Consensus 524 l~~-~Tv~eni~~~~~~~--------------~~~~~~------~~~~~~~~l~~~~L~~-------~~~~~~~~~~~~~ 575 (1374)
++. .|++||+.++.... ...... ...++.++++.++..+ .++....+.....
T Consensus 79 ~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 158 (552)
T TIGR03719 79 LDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPPWDAD 158 (552)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCcccCc
Confidence 875 59999998753210 000000 0122344444444322 1111111100112
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhcCCEEEEEccChhhHh-hccEEEEecC
Q 000647 576 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 576 g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
..+||||||||++|||||+.+|+++||||||++||+.+.+.+.+.+++.+.|+|+|||+++.+. .||+++++++
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~ 233 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDR 233 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEEC
Confidence 3689999999999999999999999999999999999999999999887789999999999886 6899999975
No 54
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.9e-54 Score=553.68 Aligned_cols=512 Identities=16% Similarity=0.178 Sum_probs=381.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAF-LRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHT 185 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~-~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~ 185 (1374)
+..++++.++.+.+++..|...+.++|.+. .++...++.. .+..++..++..+..|++..+..+...++..+++.
T Consensus 141 ~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 216 (694)
T TIGR01846 141 FREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVL----ALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGA 216 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666677788888899999999999876 3343333221 22222233445566777877777778889999999
Q ss_pred HHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 000647 186 RYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTM 264 (1374)
Q Consensus 186 ~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i 264 (1374)
+++++....++.+++++ .++..+|+ +|++.+.+.+...+...+..++..+++.. ++.+++|.+++++++.+++..++
T Consensus 217 ~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~l~li~l~~~~~~~~i 294 (694)
T TIGR01846 217 RLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLA-VMFFYSPTLTGVVIGSLVCYALL 294 (694)
T ss_pred HHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888764 56888998 69999887776655554443333333332 33456887777666655555555
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 265 MRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKY 344 (1374)
Q Consensus 265 ~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1374)
..++.+++.+...+.++..+++.........++++||.++.|+.+.+++.+.+.+..+...+..+..........++. .
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~ 373 (694)
T TIGR01846 295 SVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQ-K 373 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 666777777777666677777777777777899999999999999999988888776655554333333332222221 1
Q ss_pred HHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 000647 345 LGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELS 424 (1374)
Q Consensus 345 ~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~ 424 (1374)
+..+..+++....+..| ..++|....+ ..+...++.++..+.....+++....+.+|+.++++.+++..
T Consensus 374 ~~~~~il~~g~~lv~~g-----~it~G~lia~------~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 442 (694)
T TIGR01846 374 LTFAILLWFGAHLVIGG-----ALSPGQLVAF------NMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPR 442 (694)
T ss_pred HHHHHhHHHHHHHHHcC-----CCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 11111111111111223 3356643221 223345566777888888899999999999999987654322
Q ss_pred ccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEE
Q 000647 425 IEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIA 503 (1374)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~ 503 (1374)
... . .......+.|+++||+|.|+++ +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.
T Consensus 443 ~~~-~------~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~ 515 (694)
T TIGR01846 443 SAG-L------AALPELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVL 515 (694)
T ss_pred CCC-C------CCCCCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 100 0 0001123579999999999754 6799999999999999999999999999999999999999999999
Q ss_pred eCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---c
Q 000647 504 KPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---N 574 (1374)
Q Consensus 504 ~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~ 574 (1374)
+||.+ .+++++|+||||+|++|++|++|||.++.+ ..+++++.++++.++++++++++|.+.++ +
T Consensus 516 idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~------~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~ 589 (694)
T TIGR01846 516 VDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNP------GAPFEHVIHAAKLAGAHDFISELPQGYNTEVGE 589 (694)
T ss_pred ECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCC------CCCHHHHHHHHHHcChHHHHHhCcCccCcEecC
Confidence 99975 246789999999999999999999998643 24678999999999999999999987665 4
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 575 WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 575 ~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
.|.+||||||||++||||++++|+++|||||||+||+++++.+++.+++ .++|+|+||||++.++.+|+|+++++
T Consensus 590 ~g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~ 666 (694)
T TIGR01846 590 KGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEK 666 (694)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeC
Confidence 5789999999999999999999999999999999999999999999876 47999999999999999999999986
No 55
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1e-56 Score=556.84 Aligned_cols=189 Identities=22% Similarity=0.252 Sum_probs=162.1
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
.|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+ .+.++.++|
T Consensus 3 ~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~ 81 (490)
T PRK10938 3 SLQISQGTFRLS-DTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSD 81 (490)
T ss_pred eEEEEeEEEEcC-CeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhce
Confidence 489999999996 4569999999999999999999999999999999999999999999988753 122356999
Q ss_pred EecCCCCC---------cCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHH
Q 000647 518 VPQRPYTA---------VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1374)
Q Consensus 518 v~Q~p~l~---------~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1374)
+||+|... ..|+++|+.++. ..++++.++++.+++.+..++.+ .+||||||||++
T Consensus 82 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~ 145 (490)
T PRK10938 82 EWQRNNTDMLSPGEDDTGRTTAEIIQDEV--------KDPARCEQLAQQFGITALLDRRF--------KYLSTGETRKTL 145 (490)
T ss_pred eccCcchhhcccchhhccccHHHhcccch--------hHHHHHHHHHHHcCCHhhhhCCc--------ccCCHHHHHHHH
Confidence 99987531 347888876431 12456788999999998887766 689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 589 lARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||||+++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 146 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~ 210 (490)
T PRK10938 146 LCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLAD 210 (490)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999888764 4889999999998875 6899999975
No 56
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.4e-53 Score=498.86 Aligned_cols=510 Identities=17% Similarity=0.221 Sum_probs=376.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000647 111 VGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTRYFEN 190 (1374)
Q Consensus 111 ~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~~yl~~ 190 (1374)
.++.++...+.+..+.+.....+.++.... +..+ +..++..++..++..+..|..++++-+.-..+...+|...|++
T Consensus 6 ~ll~~l~~i~~i~qa~llA~~l~~l~~~~~--~~~l-~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 6 ALLAVLSGIAIIAQAALLADILTKLIEGQL--FQSL-LPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccc--HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555666677777777776654 2222 2233333334455677888888888888888888999999988
Q ss_pred cccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh
Q 000647 191 MAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMMRNFS 269 (1374)
Q Consensus 191 ~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i~~~~~ 269 (1374)
.......+..+. .+...+.++|-|+.+...+..++...+.+.+.-++.. ...++.+|.-++++++.++++-+.+..++
T Consensus 83 l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~-i~v~~~~w~aalIllit~PlIPlfMilvg 161 (559)
T COG4988 83 LAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLIL-IAIFFFNWAAALILLITAPLIPLFMILVG 161 (559)
T ss_pred HHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 887776666554 4688899999999998888877766555443322211 11224566666666665555444444555
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 270 PAFGKLMSKEQQLEGEYR-QLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGAT 348 (1374)
Q Consensus 270 ~~l~~l~~~~q~~e~~~r-~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (1374)
..-.+...++-+..+++. ..+.+++ +.+++++|+..+.+.+++.+.-.+..+...+..+..+..+.+.+++. +++.+
T Consensus 162 ~~a~~~s~~~~~~~~~ls~~FLD~Lr-GL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa-~lsiA 239 (559)
T COG4988 162 LAAKDASEKQFSALARLSGHFLDRLR-GLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFA-YLSIA 239 (559)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhc-ChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 554444444444444444 3567777 68999999999999988887777777777777777777666666653 44444
Q ss_pred HHHHHhhhhhhc-ccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccC
Q 000647 349 VAVILIIEPFFA-GNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIED 427 (1374)
Q Consensus 349 ~~~il~~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~ 427 (1374)
+..+.+...+.+ |. .++..+. .+.-.--..|.++-++...+|.-....++.+.+..+++.+.+.....
T Consensus 240 lvAv~~g~~ll~~G~-----ltl~~~l------~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~ 308 (559)
T COG4988 240 LVAVYIGFRLLGEGD-----LTLFAGL------FVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSG 308 (559)
T ss_pred HHHHHHHHHHHccCC-----ccHHHHH------HHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCc
Confidence 333333333333 32 2332211 11112235778999999999998888999999999887655432111
Q ss_pred CCCCCCCCCCccCCCCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCC
Q 000647 428 KSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV 507 (1374)
Q Consensus 428 ~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~ 507 (1374)
... .....+...++.+|+++.||+++++++|+||++++|+.++|+|+||||||||+++|+|+.+|++|+|.+||.
T Consensus 309 ~~~-----~~~~~~~~ei~~~~l~~~y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~ 383 (559)
T COG4988 309 EKA-----EVANEPPIEISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGI 383 (559)
T ss_pred ccc-----ccccCCCceeeecceEEecCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCc
Confidence 000 000111234556699999999989999999999999999999999999999999999999999999999997
Q ss_pred C------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCC
Q 000647 508 G------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDE 578 (1374)
Q Consensus 508 ~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~ 578 (1374)
+ ..++++++||||+||+|.||+||||.++... .+++++.++++.+++.++++. |.+.++ +.|..
T Consensus 384 ~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~------~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~ 456 (559)
T COG4988 384 DLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPD------ASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAG 456 (559)
T ss_pred cccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCc------CCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCC
Confidence 5 3578999999999999999999999998653 578899999999999999998 776654 46789
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 579 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 579 LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
|||||+|||++||||+++++++|+||||++||.++|+.|.+.+.+ +++|+|+||||+..+..+|+|++||+
T Consensus 457 LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~ 529 (559)
T COG4988 457 LSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDN 529 (559)
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecC
Confidence 999999999999999999999999999999999999999998875 58999999999999999999999986
No 57
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.1e-54 Score=544.16 Aligned_cols=450 Identities=19% Similarity=0.159 Sum_probs=290.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHHH----HhhH-
Q 000647 811 SSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVT----GMVK- 884 (1374)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~----~~~~- 884 (1374)
..+..+...++..+...++..++..++++++++.+ .||+..+ ..+..+|++.|++.+...+...+. .++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~----~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~ 141 (529)
T TIGR02868 66 RAVFRYLERLVGHDAALRSLGRLRVRVYDRLARLALAGRRRFQ----TGDLLGRLGADVDALQDLYVRVIVPLVVALVVG 141 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccCC----hhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555566666777778888888888764 6765432 245689999999988765543222 2221
Q ss_pred --hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcHH
Q 000647 885 --PSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAR 962 (1374)
Q Consensus 885 --~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~~ 962 (1374)
.++.+++..|.++++.. ..+.+++++...+.+...+ ....+.++..+.+.......-...+++..|+.+..
T Consensus 142 ~~~~~~l~~~~~~l~l~~l----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~ 214 (529)
T TIGR02868 142 SAAVAAIALLSVPAALVLA----AGLLLAGFVAPLVSLRAAR---AAEVALARLRSQLYQQLTDALDGAADLVAYGALDP 214 (529)
T ss_pred HHHHHHHHHHhHHHHHHHH----HHHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHH
Confidence 22334556777766542 1111111111111111111 11111122222222222223335678888886655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHHHHHHH
Q 000647 963 EKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASVVS 1040 (1374)
Q Consensus 963 e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~a~~~~ 1040 (1374)
+.+.+++..++..+... +..++.+....+ . .+...+...+.++++.. ..+.. +.|.+...+ ....
T Consensus 215 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~g~~----t~g~l~~~~----~~~~ 281 (529)
T TIGR02868 215 ALAQVEAADRELLAAER---RAARATGLGAAA-Q-LLAAGLAVLGALWAGGPAVADGTL----APATLAVLV----LLPL 281 (529)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHhCCCC----ChhHHHHHH----HHHH
Confidence 55444443333322221 111111111110 0 11111111122222221 11111 122222211 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCcccccccce
Q 000647 1041 QSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLT 1120 (1374)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~ls 1120 (1374)
.....+..+......+.+...+.+|+.++.+..++.+.. ....+...++ ..+.|+|+||+|.||+++++|+|+|
T Consensus 282 ~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~~~~~~~---~~~~I~~~~vsf~Y~~~~~vL~~is 355 (529)
T TIGR02868 282 AAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEG---VVPAAGALGL---GKPTLELRDLSFGYPGSPPVLDGVS 355 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCC---CCCCCcccCC---CCceEEEEEEEEecCCCCceeecce
Confidence 333445555566667778888999999987653221110 0000001112 2467999999999998778999999
Q ss_pred EEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEEEecCCCCCCCcchHHHhccCCChh
Q 000647 1121 FEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSRE 1199 (1374)
Q Consensus 1121 ~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~ 1199 (1374)
|+|+|||++|||||||||||||+++|.|+|+|++|+|.+||+|++++ +.+|++|+||||||+||+|||||||.|+.+
T Consensus 356 l~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~-- 433 (529)
T TIGR02868 356 LDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRP-- 433 (529)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCC--
Confidence 99999999999999999999999999999999999999999999988 567889999999999999999999998743
Q ss_pred HHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhhhc
Q 000647 1200 EAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLCSI 1278 (1374)
Q Consensus 1200 e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~~~ 1278 (1374)
+.+|++++++++.++++++++++|+||||.+ ++|.+|||||||||||
T Consensus 434 --------------------~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiai------------ 481 (529)
T TIGR02868 434 --------------------DATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLAL------------ 481 (529)
T ss_pred --------------------CCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHH------------
Confidence 2357778999999999999999999999997 5789999999999999
Q ss_pred ccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCC
Q 000647 1279 NKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRP 1348 (1374)
Q Consensus 1279 ~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl 1348 (1374)
|||++++|+|+||||||||||.++|+.+++.++. .++|+|+||||+
T Consensus 482 ------------------------ARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 482 ------------------------ARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred ------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999887654 589999999996
No 58
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.1e-53 Score=577.50 Aligned_cols=531 Identities=17% Similarity=0.176 Sum_probs=353.2
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 87 SLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKY 166 (1374)
Q Consensus 87 ~l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~y 166 (1374)
++.++++.+.|+++. +++.++++++...+...+|.+.+.+++.+.... ........+.++.++.+++..+..|
T Consensus 812 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~l~~~~~~i~~~~~~~ 884 (1466)
T PTZ00265 812 NLRIVYREIFSYKKD-----VTIIALSILVAGGLYPVFALLYAKYVSTLFDFA--NLEANSNKYSLYILVIAIAMFISET 884 (1466)
T ss_pred hHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666665442 444455566777788889999999988776421 1111111122222222222333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCC---CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 167 ITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDG---RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLC 243 (1374)
Q Consensus 167 l~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~---~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 243 (1374)
+...+..+.-+.+..+++.+.|+++...++.|+|+ ..++..+|+++|++.+.+.+...+..++..++..+ +...++
T Consensus 885 l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i-~~~~~~ 963 (1466)
T PTZ00265 885 LKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFL-VSMVMS 963 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 44444444444578889999999999999999974 35688899999999988777665555444443322 222333
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHH-----------------HHHHHHHHHHHHHHHhHHHHHHhCC
Q 000647 244 SYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMS-KEQ-----------------QLEGEYRQLHSRLRTHAESIAFYGG 305 (1374)
Q Consensus 244 ~~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~-~~q-----------------~~e~~~r~~~~~ir~~~E~Ia~~~g 305 (1374)
++.+|.++++++..++ ++...+.+....... +.+ +..++..........++++|+.|+.
T Consensus 964 ~~~~~~l~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~ 1040 (1466)
T PTZ00265 964 FYFCPIVAAVLTGTYF---IFMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGL 1040 (1466)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcc
Confidence 4556655444332221 122222222221111 111 1122333445555668889999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccc-CCccchhHHHHHHHHHHHHH
Q 000647 306 ENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLK-PDTSTLGRAKMLSNLRYHTS 384 (1374)
Q Consensus 306 e~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~-~~~~~~g~~~~~~~~~~~~~ 384 (1374)
|+.+.+++.+..+...+...+.. ...++...+.........++++ ++++.+. .+..+.|.. +..+.
T Consensus 1041 e~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~G~~lv~~g~it~g~l--~~~~~---- 1107 (1466)
T PTZ00265 1041 EDYFCNLIEKAIDYSNKGQKRKT---LVNSMLWGFSQSAQLFINSFAY----WFGSFLIRRGTILVDDF--MKSLF---- 1107 (1466)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHcCCCCHHHH--HHHHH----
Confidence 99998777766655544333222 2222221111100001111111 1222211 223345532 22111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCC--CCeeee
Q 000647 385 VIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT--GNVLVE 462 (1374)
Q Consensus 385 ~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~l~ 462 (1374)
.++.....++.+......+.....+++|+.++++.+++.+..+.... .........+.|+|+||+|.||+ ++++|+
T Consensus 1108 ~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~--~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~ 1185 (1466)
T PTZ00265 1108 TFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGI--RIKNKNDIKGKIEIMDVNFRYISRPNVPIYK 1185 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCccc--ccccCCCCCceEEEEEEEEECCCCCCCcccc
Confidence 11112233456666777888999999999999976543321110000 00000112356999999999985 357999
Q ss_pred eeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC---------------------------------------------
Q 000647 463 NLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL--------------------------------------------- 497 (1374)
Q Consensus 463 ~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~--------------------------------------------- 497 (1374)
|+||+|++|++++||||||||||||+++|+|+|+|
T Consensus 1186 ~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 (1466)
T PTZ00265 1186 DLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGG 1265 (1466)
T ss_pred CeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999998
Q ss_pred ---------CccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChh
Q 000647 498 ---------VSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY 562 (1374)
Q Consensus 498 ---------~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~ 562 (1374)
++|+|.+||.+ .++|++|+||||+|++|++||+|||.|+.+ ..++++++++++.+++++
T Consensus 1266 ~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~------~at~eeI~~A~k~A~l~~ 1339 (1466)
T PTZ00265 1266 SGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKE------DATREDVKRACKFAAIDE 1339 (1466)
T ss_pred cccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCC------CCCHHHHHHHHHHcCCHH
Confidence 69999999976 357899999999999999999999999853 257889999999999999
Q ss_pred HHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccCh
Q 000647 563 LLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRP 635 (1374)
Q Consensus 563 ~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~ 635 (1374)
++.++|.+.++ +.|.+|||||||||||||||+++|+|||||||||+||+++|+.+.+.+.+ .++|+|+||||+
T Consensus 1340 fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRl 1419 (1466)
T PTZ00265 1340 FIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRI 1419 (1466)
T ss_pred HHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechH
Confidence 99999988776 35789999999999999999999999999999999999999999998875 389999999999
Q ss_pred hhHhhccEEEEecC
Q 000647 636 ALVAFHDVVLSLDG 649 (1374)
Q Consensus 636 ~~~~~~d~il~l~~ 649 (1374)
+.++.+|+|++|++
T Consensus 1420 sti~~aD~Ivvl~~ 1433 (1466)
T PTZ00265 1420 ASIKRSDKIVVFNN 1433 (1466)
T ss_pred HHHHhCCEEEEEeC
Confidence 99999999999986
No 59
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-54 Score=551.11 Aligned_cols=469 Identities=17% Similarity=0.203 Sum_probs=304.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHH----HHHHh
Q 000647 808 SAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSG----LVTGM 882 (1374)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~----~~~~~ 882 (1374)
.++..++.+...++..+.+.++..++..++++++++.+ .||+..+ ..+..+|++.|++.+...+.. ++.++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~----~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~ 148 (588)
T PRK11174 73 FVLRALLAWLRERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGKP----AGSWATLVLEQVEDMHDFYARYLPQMALAV 148 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCC----HHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 33444455555566667777777788888888888764 6665322 235689999999887654432 33333
Q ss_pred hH---hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCC
Q 000647 883 VK---PSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGG 959 (1374)
Q Consensus 883 ~~---~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g 959 (1374)
+. .++.+++++|+++++.. ..++..+++...+.+.. .+...+..+..+.........-.+.+++..|+.
T Consensus 149 ~~~~~~~~~l~~~~~~l~l~~l----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~ 220 (588)
T PRK11174 149 LVPLLILIAVFPINWAAGLILL----GTAPLIPLFMALVGMGA----ADANRRNFLALARLSGHFLDRLRGLETLRLFNR 220 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcc
Confidence 22 23344567888776532 11111111111111111 111111111112221111222234678888887
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhhhcccchhhhhhhHH----HHHHHHH
Q 000647 960 GAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGDRALVSTQGEL----AHALRFL 1035 (1374)
Q Consensus 960 ~~~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~----~~a~~~~ 1035 (1374)
+..+.+.+++..++..+......+.......+..++. .+.. ..+.++++....+.. +.|.+ .....++
T Consensus 221 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~g~~----t~G~l~~~~~~~~~~~ 292 (588)
T PRK11174 221 GEAETESIRSASEDFRQRTMEVLRMAFLSSAVLEFFA-SISI---ALVAVYFGFSYLGEL----NFGHYGTGVTLFAGFF 292 (588)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH---HHHHHHHHHHHhccc----ccccccccchHHHHHH
Confidence 6666555544444443332222211111111111111 0110 011111111111110 11211 1011111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCccc
Q 000647 1036 -ASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKL 1114 (1374)
Q Consensus 1036 -a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~ 1114 (1374)
.......+..+..+......+.+...+.+|+.++.+.+++.++ ....+ . +. ...++|+|+||+|+|+++++
T Consensus 293 ~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~-----~~~~~-~-~~-~~~~~i~~~~vsf~~~~~~~ 364 (588)
T PRK11174 293 VLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLETPLAHPQ-----QGEKE-L-AS-NDPVTIEAEDLEILSPDGKT 364 (588)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccC-----CCccc-c-CC-CCCceEEEEeeEEeccCCCe
Confidence 1222334455666666677778888899999998754321100 00000 0 10 11457999999987666678
Q ss_pred ccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHh
Q 000647 1115 LARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQI 1192 (1374)
Q Consensus 1115 vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl 1192 (1374)
||+|+||+|+|||++|||||||||||||+++|.|+| |.+|+|.+||+|++++ +.+|++|+||||||+||+|||||||
T Consensus 365 vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI 443 (588)
T PRK11174 365 LAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNV 443 (588)
T ss_pred eeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHh
Confidence 999999999999999999999999999999999999 8999999999999998 4778899999999999999999999
Q ss_pred ccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchh
Q 000647 1193 IYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLV 1271 (1374)
Q Consensus 1193 ~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~ 1271 (1374)
.|+.+ +.+|++++++++.++++++++++|+||||.+ ++|.+|||||||||||
T Consensus 444 ~~g~~----------------------~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRial----- 496 (588)
T PRK11174 444 LLGNP----------------------DASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLAL----- 496 (588)
T ss_pred hcCCC----------------------CCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHH-----
Confidence 98742 2457788899999999999999999999997 4789999999999999
Q ss_pred hHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCC
Q 000647 1272 LIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPA 1349 (1374)
Q Consensus 1272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~ 1349 (1374)
||||+++|+||||||||||||.++|+.+++.+++ .++|+|+||||++
T Consensus 497 -------------------------------ARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~ 545 (588)
T PRK11174 497 -------------------------------ARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLE 545 (588)
T ss_pred -------------------------------HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChH
Confidence 9999999999999999999999999998876654 5899999999999
Q ss_pred chhhccceEEEEcC
Q 000647 1350 LIPFHSLELRLIDG 1363 (1374)
Q Consensus 1350 ~i~~~~~~l~l~~g 1363 (1374)
+++..|+++.+.+|
T Consensus 546 ~i~~aD~Iivl~~G 559 (588)
T PRK11174 546 DLAQWDQIWVMQDG 559 (588)
T ss_pred HHHhCCEEEEEeCC
Confidence 99999999999665
No 60
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-55 Score=555.80 Aligned_cols=191 Identities=23% Similarity=0.288 Sum_probs=156.0
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCCC
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYT 524 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~l 524 (1374)
|+++||++.|. ++++|+|+||+|++|++++|+||||||||||+|+|+|+.+|++|+|.++|. ..++|++|++..
T Consensus 2 i~i~nls~~~g-~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~-----~~i~~~~q~~~~ 75 (638)
T PRK10636 2 IVFSSLQIRRG-VRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGN-----WQLAWVNQETPA 75 (638)
T ss_pred EEEEEEEEEeC-CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----CEEEEEecCCCC
Confidence 78999999994 578999999999999999999999999999999999999999999999873 258999997644
Q ss_pred CcCCHHHHhcCCCC---------------C------------CcccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCC
Q 000647 525 AVGTLRDQLIYPLT---------------S------------DQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWG 576 (1374)
Q Consensus 525 ~~~Tv~eni~~~~~---------------~------------~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g 576 (1374)
+..|+.+.+.-... . ........+.++.++++.+|+. +..++.+
T Consensus 76 ~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~-------- 147 (638)
T PRK10636 76 LPQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPV-------- 147 (638)
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCch--------
Confidence 44455544321100 0 0000011234677788888886 4555543
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhcCCEEEEEccChhhHh-hccEEEEecC
Q 000647 577 DELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 577 ~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
.+||||||||++|||||+.+|++|||||||++||+++...+.+.+++.+.|+|+||||..++. .||++++|++
T Consensus 148 ~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~ 221 (638)
T PRK10636 148 SDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQ 221 (638)
T ss_pred hhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeC
Confidence 589999999999999999999999999999999999999999999888889999999999875 6899999985
No 61
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.1e-53 Score=533.92 Aligned_cols=507 Identities=16% Similarity=0.168 Sum_probs=360.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 000647 115 VLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTRYFENMAYY 194 (1374)
Q Consensus 115 ~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y 194 (1374)
++...+.+..|.+.+.++|.+....... .. +..++++.++..++..+..|+...+..+...++..+++.+++++....
T Consensus 5 ~~~~~~~~~~p~~~~~iid~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~ 82 (569)
T PRK10789 5 IIIAMLQLIPPKVVGIIVDGVTEQHMTT-GQ-ILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQ 82 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcch-hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4445566677888888888776442211 11 122222222333344556677777777777788889999999999998
Q ss_pred cccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhHHHH
Q 000647 195 KISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMMRNFSPAFG 273 (1374)
Q Consensus 195 ~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i~~~~~~~l~ 273 (1374)
+.+++++ ..++..+|+++|++.+...+...+..++..++..+++.+.++.+++|.+++++++..++..++..++.++..
T Consensus 83 ~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~ 162 (569)
T PRK10789 83 HPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLH 162 (569)
T ss_pred CHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887754 457899999999999876655555555544333333323332356777766665555555555555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 274 KLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVIL 353 (1374)
Q Consensus 274 ~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 353 (1374)
+...+.++..+++.........+++.||.|+.|+.+.+++.+..++..+...+..+............ .......++
T Consensus 163 ~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l 239 (569)
T PRK10789 163 ERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIA---IGMANLLAI 239 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 66666666666676666667778999999999999998887777665554443322222111111111 111111111
Q ss_pred hhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCC
Q 000647 354 IIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRN 433 (1374)
Q Consensus 354 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~ 433 (1374)
+...++ ...+..+.|.. ++.+ .+...++.++..+......+.....+.+|+.++++.+++.....
T Consensus 240 ~~g~~l---v~~g~lt~g~l--~a~~----~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~------ 304 (569)
T PRK10789 240 GGGSWM---VVNGSLTLGQL--TSFV----MYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS------ 304 (569)
T ss_pred HHHHHH---HHcCCcCHHHH--HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC------
Confidence 111111 01122355542 2221 22233445666677777888999999999999987543321100
Q ss_pred CCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC----
Q 000647 434 GSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---- 508 (1374)
Q Consensus 434 ~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~---- 508 (1374)
.......+.|+++|++|.|+++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 305 --~~~~~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~ 382 (569)
T PRK10789 305 --EPVPEGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKL 382 (569)
T ss_pred --CCCCCCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhC
Confidence 0001123469999999999864 679999999999999999999999999999999999999999999999865
Q ss_pred --ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhH
Q 000647 509 --SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGE 583 (1374)
Q Consensus 509 --~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGq 583 (1374)
.+++++++|+||+|++|++|++|||.++.+. .+++++.++++.+++++++.++|.+.++ +.|.+|||||
T Consensus 383 ~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~------~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq 456 (569)
T PRK10789 383 QLDSWRSRLAVVSQTPFLFSDTVANNIALGRPD------ATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQ 456 (569)
T ss_pred CHHHHHhheEEEccCCeeccccHHHHHhcCCCC------CCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHH
Confidence 2457889999999999999999999987432 4678899999999999999999877654 4678999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
|||++||||++++|+++|||||||+||+++++.+.+.+++ .++|+|+||||++.++.+|+|+++++
T Consensus 457 ~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~ 524 (569)
T PRK10789 457 KQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQH 524 (569)
T ss_pred HHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeC
Confidence 9999999999999999999999999999999999998876 58999999999999999999999985
No 62
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-53 Score=492.07 Aligned_cols=530 Identities=19% Similarity=0.208 Sum_probs=341.2
Q ss_pred hHHHHHHHHHHhccccchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cChhHHH----HHHHHHHHHHHHHH
Q 000647 85 LKSLQVLAAILLSEMGKMGA-RDLLALVGIVVLRTALSNRLAKVQGFLFRAAFL-RRVPLFF----QLISENILLCFLLS 158 (1374)
Q Consensus 85 ~~~l~~Ll~i~~p~~~~~~~-~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~-~~~~~f~----~~l~~~~~~~~~~~ 158 (1374)
++-++.+.....|.-. ++. ..++.++++++..-++.+.+|..-+...|.+-+ ...+.-+ ..+..|.+.-+.+.
T Consensus 10 ~~~~~~l~~~~~~k~~-p~~r~~v~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~ 88 (591)
T KOG0057|consen 10 LKILRSLVSYKWPKSR-PVLRFRVFPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSS 88 (591)
T ss_pred hHHHHHHHhhheecCC-ceeeehHHHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHH
Confidence 5556666666666422 222 334556666777788999999999999998852 2233211 22233333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 159 TMHSTSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLL 237 (1374)
Q Consensus 159 ~~~~~~~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~ 237 (1374)
+++-+..++-.+... ...++...+.|.+....+.+++.+ ..++....|..-...+...+...+..++..++.+.+
T Consensus 89 ~F~el~~~vfa~v~q----~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~ 164 (591)
T KOG0057|consen 89 VFNELRNFVFAKVAQ----RVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIAL 164 (591)
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333 344444455555555555555533 355777777766666666666555555544443322
Q ss_pred HHHHHHHhhhhhHHHHHH----HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHH
Q 000647 238 YTWRLCSYASPKYVFWIL----AYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHI 313 (1374)
Q Consensus 238 ~~~~l~~~~~~~l~~~~l----~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l 313 (1374)
.+..+..-.++.+.++++ .|......+++|=.+.-.++ .+.+.+.....-....|-|.||.||-|+.|.+++
T Consensus 165 v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~----N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y 240 (591)
T KOG0057|consen 165 VSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAM----NNADNSASRRAYDSLINYEIVKSFNNEEYEASRY 240 (591)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHH----HhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHH
Confidence 222222223555554433 23222222233322222222 2333333332333344889999999999999766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Q 000647 314 QQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSL 393 (1374)
Q Consensus 314 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l 393 (1374)
.....+..+...+......+.++.|..++... .+...++. ..| +..+..+.|...++.. .+..+..++
T Consensus 241 ~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~-~~~im~l~----~~g-i~~~~mtvgdlv~~n~------l~~qL~~~l 308 (591)
T KOG0057|consen 241 DGSLKTYERAGLKYSSSLAFLNFGQKAIFSVA-LTFIMVLG----SNG-IAAGKMTVGDLVMVNS------LLFQLSLPL 308 (591)
T ss_pred HHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHH-HHHHHHHH----hhh-hhhccccccchhhHHH------HHHHHHhHH
Confidence 66655554433332222333344444332111 11111111 122 2222345555443322 233333455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCE
Q 000647 394 GTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSN 473 (1374)
Q Consensus 394 ~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~ 473 (1374)
..+...+.++.+...-...+....+...++. .. ........+.|+|+||+|+|++++++|+++||+|++||.
T Consensus 309 ~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~--~~------~~~i~~~~~~I~F~dV~f~y~~k~~iL~gvsf~I~kGek 380 (591)
T KOG0057|consen 309 NFLGSVYRELRQALTDMRTLFILLEVDEDIQ--EA------ALPIELFGGSIEFDDVHFSYGPKRKVLKGVSFTIPKGEK 380 (591)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhhhhhhhh--hc------cCCcccCCCcEEEEeeEEEeCCCCceecceeEEecCCCE
Confidence 5666666666554433333322222111111 10 001112345799999999998888899999999999999
Q ss_pred EEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCC
Q 000647 474 LLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLT 547 (1374)
Q Consensus 474 ~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~ 547 (1374)
+||+|+|||||||++|+|.++++ ++|+|.+||++ ..+|+.||||||+..||++||..||.||... .+
T Consensus 381 VaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~s------as 453 (591)
T KOG0057|consen 381 VAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPS------AS 453 (591)
T ss_pred EEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCC------cC
Confidence 99999999999999999999999 99999999986 3578899999999999999999999999764 67
Q ss_pred HHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh-
Q 000647 548 HGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA- 623 (1374)
Q Consensus 548 ~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~- 623 (1374)
++++.++++.+++++.+.++|.++.+ +.|..|||||||||+||||++++|+|+++|||||+||.++|..+.+.+.+
T Consensus 454 ~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~ 533 (591)
T KOG0057|consen 454 DEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV 533 (591)
T ss_pred HHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh
Confidence 89999999999999999999988776 56889999999999999999999999999999999999999999999876
Q ss_pred -cCCEEEEEccChhhHhhccEEEEecCC
Q 000647 624 -MGTSCITISHRPALVAFHDVVLSLDGE 650 (1374)
Q Consensus 624 -~~~TiI~vtH~~~~~~~~d~il~l~~~ 650 (1374)
.++|+|+|.||+++++.+|+|++++++
T Consensus 534 ~~~rTvI~IvH~l~ll~~~DkI~~l~nG 561 (591)
T KOG0057|consen 534 MSGRTVIMIVHRLDLLKDFDKIIVLDNG 561 (591)
T ss_pred cCCCeEEEEEecchhHhcCCEEEEEECC
Confidence 489999999999999999999999873
No 63
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.4e-54 Score=542.54 Aligned_cols=256 Identities=25% Similarity=0.325 Sum_probs=220.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCcccccccce
Q 000647 1041 QSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLT 1120 (1374)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~ls 1120 (1374)
+.+..+..+......+.....+.+|++++.+.++...+. . .. .....|+|+|+||+|+||+++++|+|+|
T Consensus 280 ~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~------~-~~---~~~~~~~I~f~~vsf~y~~~~~vl~~is 349 (567)
T COG1132 280 RLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDP------P-DP---LKDTIGSIEFENVSFSYPGKKPVLKDIS 349 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC------C-CC---CCCCCCeEEEEEEEEEcCCCCccccCce
Confidence 444455566666666777788999999988653221110 0 00 1123688999999999998889999999
Q ss_pred EEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCCh
Q 000647 1121 FEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSR 1198 (1374)
Q Consensus 1121 ~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~ 1198 (1374)
|+|+|||++||||||||||||++++|.|||||.+|+|.+||+||+++ +.+|++|++|||||+||+|||||||.|+.+
T Consensus 350 ~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~- 428 (567)
T COG1132 350 FSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRP- 428 (567)
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCC-
Confidence 99999999999999999999999999999999999999999999999 578999999999999999999999998854
Q ss_pred hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-cccCCChhhhhhhccccchhhHHhhh
Q 000647 1199 EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WEDILSLGEQQRLGMVSHLVLIQLCS 1277 (1374)
Q Consensus 1199 ~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~-~g~~LSgGQrQrlai~~~~~~~~~~~ 1277 (1374)
+.+|++++++++.++++++++++|+||||.++ .|..|||||||||||
T Consensus 429 ---------------------~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlai----------- 476 (567)
T COG1132 429 ---------------------DATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAI----------- 476 (567)
T ss_pred ---------------------CCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHH-----------
Confidence 23567788888888999999999999999985 789999999999999
Q ss_pred cccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhcc
Q 000647 1278 INKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHS 1355 (1374)
Q Consensus 1278 ~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~~ 1355 (1374)
|||++|+|+||||||||||||.++|+.+++.++. .|+|+|+||||+++++..|
T Consensus 477 -------------------------ARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD 531 (567)
T COG1132 477 -------------------------ARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNAD 531 (567)
T ss_pred -------------------------HHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCC
Confidence 9999999999999999999999999999887642 5789999999999999999
Q ss_pred ceEEEEcCC
Q 000647 1356 LELRLIDGE 1364 (1374)
Q Consensus 1356 ~~l~l~~g~ 1364 (1374)
+++.+.+|+
T Consensus 532 ~IiVl~~G~ 540 (567)
T COG1132 532 RIIVLDNGR 540 (567)
T ss_pred EEEEEECCE
Confidence 999996654
No 64
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.1e-54 Score=581.59 Aligned_cols=189 Identities=15% Similarity=0.195 Sum_probs=150.9
Q ss_pred CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCC----cCCccEEEeCCCCc-----cccccEEEEecCCCCCc-C
Q 000647 458 NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW----PLVSGHIAKPGVGS-----DLNKEIFYVPQRPYTAV-G 527 (1374)
Q Consensus 458 ~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~----~~~~G~I~~~g~~~-----~~~~~i~~v~Q~p~l~~-~ 527 (1374)
+++|+|+|+++++||+++|+||||||||||+|+|+|+. +|.+|+|.++|.+. ..++.++||+|++.++. .
T Consensus 74 ~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~l 153 (1394)
T TIGR00956 74 FDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHL 153 (1394)
T ss_pred ceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCC
Confidence 56999999999999999999999999999999999986 57899999999651 24567999999987665 6
Q ss_pred CHHHHhcCCCCCCc---ccCCCCH----HH-HHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 528 TLRDQLIYPLTSDQ---EVEPLTH----GG-MVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 528 Tv~eni~~~~~~~~---~~~~~~~----~~-~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
||+||+.|+..... .....+. ++ .+++++.++|.+..+....+ +....||||||||++|||+|+.+|++
T Consensus 154 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~---~~~~~LSGGerkRvsIA~aL~~~p~v 230 (1394)
T TIGR00956 154 TVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGN---DFVRGVSGGERKRVSIAEASLGGAKI 230 (1394)
T ss_pred CHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCC---CcCCCCCcccchHHHHHHHHHhCCCE
Confidence 99999988532110 0001111 12 24578999998776654311 11257999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChh--hHhhccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPA--LVAFHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~--~~~~~d~il~l~~ 649 (1374)
++|||||+|||+.+...+.+.+++ .|+|+|+++|++. ....+|++++|++
T Consensus 231 lllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~ 286 (1394)
T TIGR00956 231 QCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE 286 (1394)
T ss_pred EEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC
Confidence 999999999999999999888764 3899999999963 4467999999975
No 65
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=8.8e-56 Score=491.62 Aligned_cols=199 Identities=27% Similarity=0.382 Sum_probs=163.0
Q ss_pred CcEEEeeeEEEcC--C-CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCC------
Q 000647 443 NYIEFSGVKVVTP--T-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVG------ 508 (1374)
Q Consensus 443 ~~i~~~~v~~~~~--~-~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~------ 508 (1374)
..++++|+++.+. + ...+++++||+|++||.++|||.||||||--.+.++|++|. .+|+|.++|.+
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 4688999887653 2 35799999999999999999999999999999999999985 47999999975
Q ss_pred cc---cc-ccEEEEecCCCCC---cCCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCChh---HHhcCCCCccccCCC
Q 000647 509 SD---LN-KEIFYVPQRPYTA---VGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGD 577 (1374)
Q Consensus 509 ~~---~~-~~i~~v~Q~p~l~---~~Tv~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~L~~---~~~~~~~~~~~~~g~ 577 (1374)
.+ +| .+|+.++|+|..- .-||..+|.-+..... .......+++.+.|+.+|+.+ .++.+| +
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~rl~~yP--------H 156 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKRLDAYP--------H 156 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhhhhhCC--------c
Confidence 11 22 5799999999642 2488777764332111 112234567889999999965 355566 6
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 578 ELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 578 ~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+||||||||+.||.||+.+|++||.||||.|||.....+|.+.+++ .|..+++||||+..++ ++|+|++|..
T Consensus 157 eLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~ 233 (534)
T COG4172 157 ELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQH 233 (534)
T ss_pred ccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEec
Confidence 8999999999999999999999999999999999999999988864 5999999999999986 7999999975
No 66
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=5.3e-53 Score=566.76 Aligned_cols=199 Identities=20% Similarity=0.237 Sum_probs=171.7
Q ss_pred CcEEEeeeEEEcC-CCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEE
Q 000647 443 NYIEFSGVKVVTP-TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIF 516 (1374)
Q Consensus 443 ~~i~~~~v~~~~~-~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~ 516 (1374)
..|+++|+++.|+ +++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ .+.++.+|
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~~~~~~r~~IG 1006 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIETNLDAVRQSLG 1006 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcchHHHHhhcEE
Confidence 4699999999996 35789999999999999999999999999999999999999999999999864 13467899
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
|+||++.++. .|++||+.++...........++++.++++.++|.+..++.+ .+||||||||++|||||+.
T Consensus 1007 ~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~~~~~--------~~LSGGqKQRLsLArALi~ 1078 (2272)
T TIGR01257 1007 MCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEA--------QDLSGGMQRKLSVAIAFVG 1078 (2272)
T ss_pred EEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHHc
Confidence 9999998876 599999987532211111112356788999999998887765 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+|+++||||||||||+.+++.+.+.+++ .|+|||++||+++.+. .+|+|++|++
T Consensus 1079 ~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~ 1135 (2272)
T TIGR01257 1079 DAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQ 1135 (2272)
T ss_pred CCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999998865 4899999999999885 7999999975
No 67
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=9.8e-54 Score=550.59 Aligned_cols=461 Identities=16% Similarity=0.165 Sum_probs=308.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHH----HHHh
Q 000647 808 SAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGL----VTGM 882 (1374)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~----~~~~ 882 (1374)
.++..++.....++..+++.+...++...++++.++.+ .||+..+. .+..+|++ |++.+...+... +..+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~----g~~~~r~~-~~~~i~~~~~~~~~~~~~~~ 260 (686)
T TIGR03797 186 AVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQYST----GDLASRAM-GISQIRRILSGSTLTTLLSG 260 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCCCCh----hHHHHHHh-HHHHHHHHHHHHHHHHHHHH
Confidence 33344455555566677777777788888888888765 66653222 34577886 666554443322 2111
Q ss_pred h---HhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCC
Q 000647 883 V---KPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGG 959 (1374)
Q Consensus 883 ~---~~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g 959 (1374)
+ ..++.+++++|.++++.. .++.+++++...+.+ ...+...+..+..+.............+++..++.
T Consensus 261 ~~~~~~~~~l~~~~~~l~li~l----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 332 (686)
T TIGR03797 261 IFALLNLGLMFYYSWKLALVAV----ALALVAIAVTLVLGL----LQVRKERRLLELSGKISGLTVQLINGISKLRVAGA 332 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcc
Confidence 1 123334556777766542 111111111111111 11222222222222322222233335678888887
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHHHH
Q 000647 960 GAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLAS 1037 (1374)
Q Consensus 960 ~~~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~a~ 1037 (1374)
+..+...+++.+.+..+......+...+...+..++. .+...+.++++.. ..+.. +.|.+.. +..
T Consensus 333 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~~~il~~g~~lv~~g~l----tiG~lva----~~~ 399 (686)
T TIGR03797 333 ENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLP-----VLTSAALFAAAISLLGGAGL----SLGSFLA----FNT 399 (686)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCCC----CHHHHHH----HHH
Confidence 6666555555555554433322222212111111111 1111222222221 11211 2233222 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCC-ccccc
Q 000647 1038 VVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLA 1116 (1374)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL 1116 (1374)
..++....+..+......+.+...+.+|+.++.+.+++.++ ... +.....|.|+|+||+|+||. ++++|
T Consensus 400 l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~-----~~~-----~~~~~~~~I~~~nvsf~Y~~~~~~vL 469 (686)
T TIGR03797 400 AFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDE-----AKT-----DPGKLSGAIEVDRVTFRYRPDGPLIL 469 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc-----CcC-----CCCCCCceEEEEEEEEEcCCCCccce
Confidence 33344556667777777888888999999998754221110 000 01113578999999999964 67899
Q ss_pred ccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhcc
Q 000647 1117 RQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIY 1194 (1374)
Q Consensus 1117 ~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~y 1194 (1374)
+|+||+|+|||++|||||||||||||+++|.|+|+|.+|+|.+||+|++++ +.+|++|++|||||++|+|||||||.+
T Consensus 470 ~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~ 549 (686)
T TIGR03797 470 DDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAG 549 (686)
T ss_pred eeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhc
Confidence 999999999999999999999999999999999999999999999999988 578999999999999999999999987
Q ss_pred CCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhH
Q 000647 1195 PLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLI 1273 (1374)
Q Consensus 1195 p~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~ 1273 (1374)
+.+ .+|++++++++.++++++++++|+|+||.+ ++|.+|||||||||+|
T Consensus 550 ~~~-----------------------~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRial------- 599 (686)
T TIGR03797 550 GAP-----------------------LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLI------- 599 (686)
T ss_pred CCC-----------------------CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHH-------
Confidence 632 346778899999999999999999999997 5789999999999999
Q ss_pred HhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchhh
Q 000647 1274 QLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPF 1353 (1374)
Q Consensus 1274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~~~~TvI~IaHRl~~i~~ 1353 (1374)
||||+++|+|||||||||+||.++|+.+.+.++..++|+|+||||+++++.
T Consensus 600 -----------------------------ARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr~~~i~~ 650 (686)
T TIGR03797 600 -----------------------------ARALVRKPRILLFDEATSALDNRTQAIVSESLERLKVTRIVIAHRLSTIRN 650 (686)
T ss_pred -----------------------------HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecChHHHHc
Confidence 999999999999999999999999999988777678999999999999999
Q ss_pred ccceEEEEcC
Q 000647 1354 HSLELRLIDG 1363 (1374)
Q Consensus 1354 ~~~~l~l~~g 1363 (1374)
.|+++.|.+|
T Consensus 651 ~D~Iivl~~G 660 (686)
T TIGR03797 651 ADRIYVLDAG 660 (686)
T ss_pred CCEEEEEECC
Confidence 9999999654
No 68
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5e-52 Score=521.00 Aligned_cols=506 Identities=17% Similarity=0.201 Sum_probs=356.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAF-LRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHT 185 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~-~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~ 185 (1374)
++..+++.++...+.+..|...+.++|.+. ..+...++. ++++.++..++..+..|+...+..+.-..+..+++.
T Consensus 8 ~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 83 (544)
T TIGR01842 8 FIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLM----LTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQ 83 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666677777888899999999999766 333333322 222222223334455666666666666667778888
Q ss_pred HHhhccccccccccCCCCCChhHHHHccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 000647 186 RYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSE-LVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTM 264 (1374)
Q Consensus 186 ~yl~~~~~y~~~~~d~~~~npdqRit~Di~~~~~~~~~-l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i 264 (1374)
+.+++....+.. ..++...++++|++.+.+.+.. ....++..++.. ++.. ++.+++|.+++++++..++...+
T Consensus 84 ~~~~~ll~~~~~----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~-~~~~-~l~~~~~~l~li~l~~~~l~~~i 157 (544)
T TIGR01842 84 PIFAASFSATLR----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMP-IYLL-VCFLLHPWIGILALGGAVVLVGL 157 (544)
T ss_pred HHHHHHhcCccc----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHH-HHHHHhhHHHHHHHHHHHHHHHH
Confidence 888887776653 2345578999999998876655 333333333222 2222 23356777665554444333333
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 265 MRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKY 344 (1374)
Q Consensus 265 ~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1374)
..++.+...+...+.++..++.........+++++|+.|+.|+.+.+++++.+++..+...+..+..........++. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 236 (544)
T TIGR01842 158 ALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFR-I 236 (544)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 334445555555556666666666667777789999999999999988888888776655543333222222221111 1
Q ss_pred HHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 000647 345 LGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELS 424 (1374)
Q Consensus 345 ~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~ 424 (1374)
+.....+.+....+..| ..+.|.. ++. ..++..++.++..+......+.....+.+|+.++++.+++..
T Consensus 237 ~~~~~~~~~g~~l~~~g-----~it~g~l--~a~----~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 305 (544)
T TIGR01842 237 VLQSLVLGLGAYLAIDG-----EITPGMM--IAG----SILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRD 305 (544)
T ss_pred HHHHHHHHHHHHHHHcC-----CCCHHHH--HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 11111111111001222 3355543 222 223344556777888888899999999999999987544321
Q ss_pred ccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEE
Q 000647 425 IEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIA 503 (1374)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~ 503 (1374)
. .. ......+.++++||+|.||++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.
T Consensus 306 ~-~~--------~~~~~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 376 (544)
T TIGR01842 306 P-AM--------PLPEPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVR 376 (544)
T ss_pred C-CC--------CCCCCCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 0 00 001113469999999999864 6899999999999999999999999999999999999999999999
Q ss_pred eCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---c
Q 000647 504 KPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---N 574 (1374)
Q Consensus 504 ~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~ 574 (1374)
++|.+ ..+++.++||||+|++|++|++|||.++.+ ..+++++.++++.++++++++++|.+.++ +
T Consensus 377 ~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~------~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~ 450 (544)
T TIGR01842 377 LDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGE------NADPEKIIEAAKLAGVHELILRLPDGYDTVIGP 450 (544)
T ss_pred ECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCC------CCCHHHHHHHHHHhChHHHHHhCccccccccCC
Confidence 99865 235778999999999999999999986532 24678899999999999999999876554 4
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhhccEEEEecC
Q 000647 575 WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 575 ~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
.|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+++ .++|+|+||||++.++.+|+++++++
T Consensus 451 ~g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~ 528 (544)
T TIGR01842 451 GGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQD 528 (544)
T ss_pred CcCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 6889999999999999999999999999999999999999999998865 47999999999999999999999985
No 69
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=4.8e-54 Score=545.94 Aligned_cols=190 Identities=23% Similarity=0.302 Sum_probs=153.3
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCC
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 523 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~ 523 (1374)
.|+++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+|+|+|+.+|++|+|.+++. ..++|++|.+.
T Consensus 3 ~l~i~~ls~~~~-~~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~~-----~~~~~l~q~~~ 76 (635)
T PRK11147 3 LISIHGAWLSFS-DAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQD-----LIVARLQQDPP 76 (635)
T ss_pred EEEEeeEEEEeC-CceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCCC-----CEEEEeccCCC
Confidence 589999999995 468999999999999999999999999999999999999999999999862 24789999764
Q ss_pred C-CcCCHHHHhcCCCC-------------------C-Cc--------------ccCCCCHHHHHHHHHHcCChhHHhcCC
Q 000647 524 T-AVGTLRDQLIYPLT-------------------S-DQ--------------EVEPLTHGGMVELLKNVDLEYLLDRYP 568 (1374)
Q Consensus 524 l-~~~Tv~eni~~~~~-------------------~-~~--------------~~~~~~~~~~~~~l~~~~L~~~~~~~~ 568 (1374)
. ..+++.+++..+.. . .. ......+.++.++++.+++.. ++.+
T Consensus 77 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~~--~~~~ 154 (635)
T PRK11147 77 RNVEGTVYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQLGLDP--DAAL 154 (635)
T ss_pred CCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCCC--CCch
Confidence 3 23566665421100 0 00 000012345667777777752 3322
Q ss_pred CCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhcCCEEEEEccChhhHh-hccEEEEe
Q 000647 569 PEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSL 647 (1374)
Q Consensus 569 ~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~~~TiI~vtH~~~~~~-~~d~il~l 647 (1374)
.+|||||||||+|||||+.+|++|||||||++||+++.+.+.+.+++.+.|+|+||||..++. .||+|++|
T Consensus 155 --------~~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~~tvlivsHd~~~l~~~~d~i~~L 226 (635)
T PRK11147 155 --------SSLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQGSIIFISHDRSFIRNMATRIVDL 226 (635)
T ss_pred --------hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhcCeEEEE
Confidence 589999999999999999999999999999999999999999999887789999999999885 68999999
Q ss_pred cC
Q 000647 648 DG 649 (1374)
Q Consensus 648 ~~ 649 (1374)
++
T Consensus 227 ~~ 228 (635)
T PRK11147 227 DR 228 (635)
T ss_pred EC
Confidence 85
No 70
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.7e-53 Score=549.02 Aligned_cols=469 Identities=20% Similarity=0.200 Sum_probs=309.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHH----HHHHhh
Q 000647 809 AASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSG----LVTGMV 883 (1374)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~----~~~~~~ 883 (1374)
++..++.....++..++..+...++..+++++.++.+ .||+..+ ..+..+|++.| +.+...+.. ++..++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~----~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~ 279 (710)
T TIGR03796 205 LLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQRH----AGDIASRVQLN-DQVAEFLSGQLATTALDAV 279 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCc----ccHHHHHhhhH-HHHHHHHHHHHHHHHHHHH
Confidence 3344455555566667777777777778888777764 5665322 23467888877 444433322 222221
Q ss_pred ---HhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCc
Q 000647 884 ---KPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGG 960 (1374)
Q Consensus 884 ---~~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~ 960 (1374)
..++.+++++|.++++.. ..+++++++...+.+ ...+...+..+..+.+.......-...+++..++.+
T Consensus 280 ~~~~~~~~l~~~~~~l~li~l----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e 351 (710)
T TIGR03796 280 MLVFYALLMLLYDPVLTLIGI----AFAAINVLALQLVSR----RRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLE 351 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCC
Confidence 122334566777666531 111122222111111 112222222222222222222223356788888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHHHHH
Q 000647 961 AREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASV 1038 (1374)
Q Consensus 961 ~~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~a~~ 1038 (1374)
..+.+.+++.+.+..+......+...+......++. .+...+.++++.. ..+.. +.|.+.. +...
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~~~il~~g~~~v~~g~l----t~G~lva----~~~l 418 (710)
T TIGR03796 352 SDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLT-----SLNSALILVVGGLRVMEGQL----TIGMLVA----FQSL 418 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCCC----CHHHHHH----HHHH
Confidence 666666655555555433322221111111111111 1111112222211 11111 2233322 2223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCC-cccccc
Q 000647 1039 VSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLAR 1117 (1374)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~ 1117 (1374)
.+..+..+..+......+.+...+++|+.++.+.+++.+......... +.. +.....|.|+|+||+|.||+ .+++|+
T Consensus 419 ~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~-~~~-~~~~~~~~I~~~~vsf~y~~~~~~vL~ 496 (710)
T TIGR03796 419 MSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAA-GSE-PSPRLSGYVELRNITFGYSPLEPPLIE 496 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccccc-ccc-cCCCCCCeEEEEEEEEecCCCCCCccc
Confidence 344455666777777888888899999999876532211100000000 000 10123578999999999986 578999
Q ss_pred cceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccC
Q 000647 1118 QLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYP 1195 (1374)
Q Consensus 1118 ~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp 1195 (1374)
|+||+|+|||++|||||||||||||+++|.|+|+|.+|+|.+||.|++++ +.+|++|++|||||++|+|||||||.++
T Consensus 497 ~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~ 576 (710)
T TIGR03796 497 NFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLW 576 (710)
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999988 4789999999999999999999999865
Q ss_pred CChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHH
Q 000647 1196 LSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQ 1274 (1374)
Q Consensus 1196 ~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~ 1274 (1374)
.+ +..|++++++++.+++.++++++|+||||.+ ++|.+|||||||||||
T Consensus 577 ~~----------------------~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaL-------- 626 (710)
T TIGR03796 577 DP----------------------TIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEI-------- 626 (710)
T ss_pred CC----------------------CCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHH--------
Confidence 32 2457778999999999999999999999997 5789999999999999
Q ss_pred hhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHhcCceEEEecCCCCchhhc
Q 000647 1275 LCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGITFVTSSQRPALIPFH 1354 (1374)
Q Consensus 1275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~~~~TvI~IaHRl~~i~~~ 1354 (1374)
||||+++|+|+||||||||||.++|+.+.+.++..++|+|+||||+++++..
T Consensus 627 ----------------------------ARall~~p~iliLDEptS~LD~~te~~i~~~l~~~~~T~IiitHrl~~i~~~ 678 (710)
T TIGR03796 627 ----------------------------ARALVRNPSILILDEATSALDPETEKIIDDNLRRRGCTCIIVAHRLSTIRDC 678 (710)
T ss_pred ----------------------------HHHHhhCCCEEEEECccccCCHHHHHHHHHHHHhcCCEEEEEecCHHHHHhC
Confidence 9999999999999999999999999999887777899999999999999999
Q ss_pred cceEEEEcC
Q 000647 1355 SLELRLIDG 1363 (1374)
Q Consensus 1355 ~~~l~l~~g 1363 (1374)
|+++.|.+|
T Consensus 679 D~Iivl~~G 687 (710)
T TIGR03796 679 DEIIVLERG 687 (710)
T ss_pred CEEEEEeCC
Confidence 999999554
No 71
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3.1e-53 Score=547.82 Aligned_cols=463 Identities=17% Similarity=0.186 Sum_probs=310.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHH----HHhh--
Q 000647 811 SSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLV----TGMV-- 883 (1374)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~----~~~~-- 883 (1374)
..++.....++..+++.+...++...+++++++.+ .||+..+ ..+..+|++ |.+.+...+.... ..++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~----~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~ 283 (708)
T TIGR01193 209 QQILSYIQIFLLNVLGQRLSIDIILSYIKHLFELPMSFFSTRR----TGEIVSRFT-DASSIIDALASTILSLFLDMWIL 283 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCc----hhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555666666677777777777777765 6665322 234678887 7766554433221 1111
Q ss_pred -HhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcHH
Q 000647 884 -KPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAR 962 (1374)
Q Consensus 884 -~~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~~ 962 (1374)
..++.+++++|.++.+.. ..+.+++++...+.+ ...+...+..+..+.+.......-.+.+++..++.+..
T Consensus 284 ~~~~~~l~~~~~~l~li~l----~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 355 (708)
T TIGR01193 284 VIVGLFLVRQNMLLFLLSL----LSIPVYAVIIILFKR----TFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAE 355 (708)
T ss_pred HHHHHHHHHHhHHHHHHHH----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHH
Confidence 122334566777766532 111222222222212 22222333333333333222223335788999987776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHHHHHHH
Q 000647 963 EKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASVVS 1040 (1374)
Q Consensus 963 e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~a~~~~ 1040 (1374)
+.+.+++.+.+..+......+.......+..++. .+...+.++++.. ..+.. +.|.+.. +.....
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~il~~g~~lv~~g~l----s~G~lva----~~~l~~ 422 (708)
T TIGR01193 356 RYSKIDSEFGDYLNKSFKYQKADQGQQAIKAVTK-----LILNVVILWTGAYLVMRGKL----TLGQLIT----FNALLS 422 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCCC----CHHHHHH----HHHHHH
Confidence 6666666665555433222111111111111111 1111112222221 11111 2233222 222334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCcccccccce
Q 000647 1041 QSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLT 1120 (1374)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~ls 1120 (1374)
+.+..+..+......+.+...+++|+.++.+.+++.++ .......+ ...|.|+|+||+|.||+++++|+|+|
T Consensus 423 ~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~-----~~~~~~~~---~~~~~I~~~~vsf~y~~~~~iL~~is 494 (708)
T TIGR01193 423 YFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFIN-----KKKRTELN---NLNGDIVINDVSYSYGYGSNILSDIS 494 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc-----cccccCCC---CCCCcEEEEEEEEEcCCCCcceecee
Confidence 45566677777788888888999999998764322111 00001111 23678999999999987788999999
Q ss_pred EEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCCh
Q 000647 1121 FEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSR 1198 (1374)
Q Consensus 1121 ~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~ 1198 (1374)
|+|+|||++|||||||||||||+++|.|+|+|++|+|++||+|++++ +.+|++|+||||||+||+|||||||.++..
T Consensus 495 l~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~- 573 (708)
T TIGR01193 495 LTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAK- 573 (708)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCC-
Confidence 99999999999999999999999999999999999999999999998 478899999999999999999999987631
Q ss_pred hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhhh
Q 000647 1199 EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLCS 1277 (1374)
Q Consensus 1199 ~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~~ 1277 (1374)
.+.+|++++++++.+++.++++++|.||||.+ ++|.+|||||||||+|
T Consensus 574 --------------------~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRial----------- 622 (708)
T TIGR01193 574 --------------------ENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIAL----------- 622 (708)
T ss_pred --------------------CCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHH-----------
Confidence 12356778889999999999999999999997 4789999999999999
Q ss_pred cccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh-cCceEEEecCCCCchhhccc
Q 000647 1278 INKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-MGITFVTSSQRPALIPFHSL 1356 (1374)
Q Consensus 1278 ~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-~~~TvI~IaHRl~~i~~~~~ 1356 (1374)
|||++++|+|||||||||+||.++|+.+++.++. .++|+|+||||+++++..|+
T Consensus 623 -------------------------ARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~~~~T~IiitHr~~~~~~~D~ 677 (708)
T TIGR01193 623 -------------------------ARALLTDSKVLILDESTSNLDTITEKKIVNNLLNLQDKTIIFVAHRLSVAKQSDK 677 (708)
T ss_pred -------------------------HHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCEEEEEecchHHHHcCCE
Confidence 9999999999999999999999999998876654 58999999999999999999
Q ss_pred eEEEEcCC
Q 000647 1357 ELRLIDGE 1364 (1374)
Q Consensus 1357 ~l~l~~g~ 1364 (1374)
++.+.+|.
T Consensus 678 i~~l~~G~ 685 (708)
T TIGR01193 678 IIVLDHGK 685 (708)
T ss_pred EEEEECCE
Confidence 99997653
No 72
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.3e-52 Score=522.86 Aligned_cols=461 Identities=22% Similarity=0.252 Sum_probs=301.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHHH----HhhH---
Q 000647 813 FIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVT----GMVK--- 884 (1374)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~----~~~~--- 884 (1374)
++.+...++..+.+.+...++..++++++++.+ .||+..+. .+..+|++.|++.+...+...+. .++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~----g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~ 150 (574)
T PRK11160 75 AGRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQ----GDLLNRLVADVDTLDHLYLRLISPLVAALVVILV 150 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444445555666666667777777766653 56654322 35679999999988765443222 2222
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcHHHH
Q 000647 885 PSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREK 964 (1374)
Q Consensus 885 ~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~~e~ 964 (1374)
.++.++++.|+++++... .+...+++....+.+.. .....+.++..+.+.......-.+.+++..|+.+..+.
T Consensus 151 ~~~~l~~~~~~l~l~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~ 223 (574)
T PRK11160 151 LTIGLSFFDLTLALTLGG---ILLLLLLLLPLLFYRLG----KKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYR 223 (574)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHH
Confidence 233445678888776421 11111111111111111 11122222222233322223333567788888776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhhh-cccchhhhhhhHHHHHHHHHHHHHHHHH
Q 000647 965 AMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEH-KGDRALVSTQGELAHALRFLASVVSQSF 1043 (1374)
Q Consensus 965 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~a~~~~a~~~~~~~ 1043 (1374)
+.+++..++..+......+...+......++ ..+..++.++++... .+. .+.|.+...+.+... ..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~g~~~~~g~----~t~g~l~a~~~~~~~---~~~ 291 (574)
T PRK11160 224 QQLEQTEQQWLAAQRRQANLTGLSQALMILA-----NGLTVVLMLWLAAGGVGGN----AQPGALIALFVFAAL---AAF 291 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhccc----cchhHHHHHHHHHHH---HHH
Confidence 5555544444433222221111111111111 111122223333221 111 122332222211111 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCc-ccccccceEE
Q 000647 1044 LAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ-KLLARQLTFE 1122 (1374)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~-~~vL~~ls~~ 1122 (1374)
..+..+......+.+...+.+|+.++.+..++.+. .... .. ....+.|+|+||+|.||++ +++|+|+||+
T Consensus 292 ~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~----~~~~--~~---~~~~~~i~~~~v~f~y~~~~~~il~~i~~~ 362 (574)
T PRK11160 292 EALMPVAGAFQHLGQVIASARRINEITEQKPEVTF----PTTS--TA---AADQVSLTLNNVSFTYPDQPQPVLKGLSLQ 362 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC----Cccc--CC---CCCCCeEEEEEEEEECCCCCCcceecceEE
Confidence 23344455566677778899999998764322110 0000 00 1125789999999999874 6899999999
Q ss_pred EeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCChhH
Q 000647 1123 IVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREE 1200 (1374)
Q Consensus 1123 I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e 1200 (1374)
|+|||+++||||||||||||+++|.|+|+|.+|+|.+||+|++++ ..+|++|++|||||++|+|||||||.++.+
T Consensus 363 i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~--- 439 (574)
T PRK11160 363 IKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAP--- 439 (574)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCC---
Confidence 999999999999999999999999999999999999999999988 467889999999999999999999987642
Q ss_pred HHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhhhcc
Q 000647 1201 AELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLCSIN 1279 (1374)
Q Consensus 1201 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~~~~ 1279 (1374)
+..|++++++++.+++++++++ |+||||.+ ++|.+|||||||||||
T Consensus 440 -------------------~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRial------------- 486 (574)
T PRK11160 440 -------------------NASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGI------------- 486 (574)
T ss_pred -------------------ccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHHH-------------
Confidence 2356778899999999999999 99999997 4789999999999999
Q ss_pred cccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccce
Q 000647 1280 KISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLE 1357 (1374)
Q Consensus 1280 ~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~~~~ 1357 (1374)
|||++++|+|+|||||||+||.++|+.+++.+++ .++|+|+||||+++++..|++
T Consensus 487 -----------------------ARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i 543 (574)
T PRK11160 487 -----------------------ARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRI 543 (574)
T ss_pred -----------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEE
Confidence 9999999999999999999999999998886654 489999999999999999999
Q ss_pred EEEEcCC
Q 000647 1358 LRLIDGE 1364 (1374)
Q Consensus 1358 l~l~~g~ 1364 (1374)
+.+.+|+
T Consensus 544 ~~l~~G~ 550 (574)
T PRK11160 544 CVMDNGQ 550 (574)
T ss_pred EEEeCCe
Confidence 9996654
No 73
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.2e-52 Score=527.05 Aligned_cols=462 Identities=17% Similarity=0.233 Sum_probs=303.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHH----HHHHhh-
Q 000647 810 ASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSG----LVTGMV- 883 (1374)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~----~~~~~~- 883 (1374)
+..++.....++..++..+....+...+++++++.+ .+|+..+ ..+..+|++.|++.+...+.. ++..++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~----~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~ 152 (582)
T PRK11176 77 LRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQS----TGTLLSRITYDSEQVASSSSGALITVVREGAS 152 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444445555556666667777777777654 4554322 234678999999877655433 222222
Q ss_pred --HhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcH
Q 000647 884 --KPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGA 961 (1374)
Q Consensus 884 --~~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~ 961 (1374)
..++.++++.|.++++.. ..++.+.++. ....+...+...+.++..+.........-.+.+++..++.+.
T Consensus 153 ~~~~~~~l~~~~~~l~l~~l----~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~ 224 (582)
T PRK11176 153 IIGLFIMMFYYSWQLSLILI----VIAPIVSIAI----RVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQE 224 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCH
Confidence 223344566777665532 1111111111 111112222222222222222222222233567788888766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHHHHHH
Q 000647 962 REKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASVV 1039 (1374)
Q Consensus 962 ~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~a~~~ 1039 (1374)
.+.+.+++..++..+......+...+......++. .+...+.++++.. ..+.. +.|.+.... ...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~g~~~~~~g~i----s~g~~~~~~----~~~ 291 (582)
T PRK11176 225 VETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIA-----SLALAFVLYAASFPSVMDTL----TAGTITVVF----SSM 291 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCCC----CHHHHHHHH----HHH
Confidence 66555555554444433322222222122111111 0111111111111 11111 223322221 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCC-ccccccc
Q 000647 1040 SQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQ 1118 (1374)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~ 1118 (1374)
.+.+..+..+......+.....+.+|+.++.+..++.+ .+ +...+ ...+.|+|+||+|.||+ .+++|+|
T Consensus 292 ~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~------~~--~~~~~--~~~~~i~~~~vsf~y~~~~~~il~~ 361 (582)
T PRK11176 292 IALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKD------EG--KRVIE--RAKGDIEFRNVTFTYPGKEVPALRN 361 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCC------CC--CcCCC--CCCCeEEEEEEEEecCCCCCccccC
Confidence 33445566666667777777888999988865321110 00 01111 12467999999999986 4789999
Q ss_pred ceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCC
Q 000647 1119 LTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPL 1196 (1374)
Q Consensus 1119 ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~ 1196 (1374)
+||+|+|||++||||+||||||||+++|.|+|+|.+|+|.+||+|++++ +.+|++|+||||||++|+|||||||.++.
T Consensus 362 i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~ 441 (582)
T PRK11176 362 INFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYAR 441 (582)
T ss_pred ceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999988 46788899999999999999999998863
Q ss_pred ChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHh
Q 000647 1197 SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQL 1275 (1374)
Q Consensus 1197 ~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~ 1275 (1374)
+. +..|++++++++.+++.++++++|+|+||.+ ++|.+|||||||||+|
T Consensus 442 ~~---------------------~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~L--------- 491 (582)
T PRK11176 442 TE---------------------QYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAI--------- 491 (582)
T ss_pred CC---------------------CCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHH---------
Confidence 21 2457789999999999999999999999997 4789999999999999
Q ss_pred hhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhh
Q 000647 1276 CSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPF 1353 (1374)
Q Consensus 1276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~ 1353 (1374)
||||+|+|+|+||||||||||.++|+.+.+.++. .++|+|+||||+++++.
T Consensus 492 ---------------------------ARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~ 544 (582)
T PRK11176 492 ---------------------------ARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEK 544 (582)
T ss_pred ---------------------------HHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHh
Confidence 9999999999999999999999999988876654 58999999999999999
Q ss_pred ccceEEEEcC
Q 000647 1354 HSLELRLIDG 1363 (1374)
Q Consensus 1354 ~~~~l~l~~g 1363 (1374)
.|+++.+.+|
T Consensus 545 ~D~Ii~l~~g 554 (582)
T PRK11176 545 ADEILVVEDG 554 (582)
T ss_pred CCEEEEEECC
Confidence 9999999654
No 74
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=3.3e-52 Score=527.31 Aligned_cols=466 Identities=16% Similarity=0.225 Sum_probs=314.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHHHHhh-
Q 000647 806 LQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGMV- 883 (1374)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~~~~- 883 (1374)
+..++..++.+...++..+...+...++...+++++++.+ .+++.. ...+..+|++.|++.+...+...+..++
T Consensus 62 ~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~~----~~g~~~~~l~~di~~i~~~~~~~~~~~i~ 137 (571)
T TIGR02203 62 GLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGLPVSFFDRQ----PTGTLLSRITFDSEQVASAATDAFIVLVR 137 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC----CchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555555566666766777777777777777754 555432 2245689999999988765544333222
Q ss_pred ------HhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhc
Q 000647 884 ------KPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFF 957 (1374)
Q Consensus 884 ------~~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~ 957 (1374)
..++.+++++|.++.+.. +.++.+.++. ....+...+...+..+.++...........+.+++..+
T Consensus 138 ~~~~~~~~~~~l~~~~~~l~~i~l----~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~ 209 (571)
T TIGR02203 138 ETLTVIGLFIVLLYYSWQLTLIVV----VMLPVLSILM----RRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLF 209 (571)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH----HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHh
Confidence 223334556776655531 1111111111 11112222333333444444444444444567888888
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHH
Q 000647 958 GGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFL 1035 (1374)
Q Consensus 958 ~g~~~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~ 1035 (1374)
+.+..+...+++.+++..+......+...+...+...+ ..+...+.++++.. ..+. .+.|.+....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~g~----lt~g~l~a~~--- 277 (571)
T TIGR02203 210 GGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLI-----ASLALAVVLFIALFQAQAGS----LTAGDFTAFI--- 277 (571)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHcCC----CCHhHHHHHH---
Confidence 86665555554444444333222222222222111111 11111222222211 1111 1233332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCC-ccc
Q 000647 1036 ASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKL 1114 (1374)
Q Consensus 1036 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~ 1114 (1374)
.++.+.+..+..+......+.+...+.+|+.++.+.+++.+. .. ...+ ...+.|+|+||+|+||+ .++
T Consensus 278 -~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~------~~--~~~~--~~~~~i~~~~v~f~y~~~~~~ 346 (571)
T TIGR02203 278 -TAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDT------GT--RAIE--RARGDVEFRNVTFRYPGRDRP 346 (571)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC------CC--CCCC--CCCCeEEEEEEEEEcCCCCCc
Confidence 233445566667777777888888999999988753221110 00 0111 12568999999999986 578
Q ss_pred ccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHh
Q 000647 1115 LARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQI 1192 (1374)
Q Consensus 1115 vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl 1192 (1374)
+|+|+||+|+|||+++|||+||||||||+++|.|+|+|.+|+|.+||+|++++ +.+|++++||||+|++|+|||||||
T Consensus 347 il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni 426 (571)
T TIGR02203 347 ALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNI 426 (571)
T ss_pred cccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999988 4678899999999999999999999
Q ss_pred ccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchh
Q 000647 1193 IYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLV 1271 (1374)
Q Consensus 1193 ~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~ 1271 (1374)
.++.+. +..|++++++++.++++++++++|+|+||.+ ++|.+|||||||||||
T Consensus 427 ~~~~~~---------------------~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaL----- 480 (571)
T TIGR02203 427 AYGRTE---------------------QADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAI----- 480 (571)
T ss_pred hcCCCC---------------------CCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHH-----
Confidence 876420 2457789999999999999999999999997 5789999999999999
Q ss_pred hHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCC
Q 000647 1272 LIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPA 1349 (1374)
Q Consensus 1272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~ 1349 (1374)
|||++++|+|+|||||||+||.++++.+.+.++. .++|+|+||||++
T Consensus 481 -------------------------------ARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~ 529 (571)
T TIGR02203 481 -------------------------------ARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLS 529 (571)
T ss_pred -------------------------------HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhH
Confidence 9999999999999999999999999998876654 5899999999999
Q ss_pred chhhccceEEEEcC
Q 000647 1350 LIPFHSLELRLIDG 1363 (1374)
Q Consensus 1350 ~i~~~~~~l~l~~g 1363 (1374)
.++.+|+++.+.+|
T Consensus 530 ~~~~~D~ii~l~~g 543 (571)
T TIGR02203 530 TIEKADRIVVMDDG 543 (571)
T ss_pred HHHhCCEEEEEeCC
Confidence 99999999999654
No 75
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=4e-52 Score=536.36 Aligned_cols=462 Identities=18% Similarity=0.199 Sum_probs=306.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeecCCCCCCCCccchHHHHHHHHHHHHHHH----HHh---
Q 000647 810 ASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLV----TGM--- 882 (1374)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~----~~~--- 882 (1374)
+..++.....++..+++.+...++...++++.++.+.-|+ +. ...+..+|+ .|++.+...+...+ ..+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~--~~--~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~ 273 (694)
T TIGR03375 199 FDFVLKTLRSYFLDVAGKKADLILSAKLFERVLGLRMEAR--PA--SVGSFANQL-REFESVRDFFTSATLTALIDLPFA 273 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccC--CC--ChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3444555555666666677777777777777777653232 22 223456888 68887765543322 111
Q ss_pred hHhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcHH
Q 000647 883 VKPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAR 962 (1374)
Q Consensus 883 ~~~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~~ 962 (1374)
+..++.+++++|.++++.. ..+.+++++...+.+ ...+...+..+..+.........-...+++..++.+..
T Consensus 274 ~~~~~~l~~~~~~l~li~l----~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 345 (694)
T TIGR03375 274 LLFLLVIAIIGGPLVWVPL----VAIPLILLPGLLLQR----PLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGR 345 (694)
T ss_pred HHHHHHHHHHHhHHHHHHH----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHH
Confidence 1223344556777766531 111122222111111 12222222222222232222223335678888887666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhhh--cccchhhhhhhHHHHHHHHHHHHHH
Q 000647 963 EKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEH--KGDRALVSTQGELAHALRFLASVVS 1040 (1374)
Q Consensus 963 e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~~~~~~~~~~~~~~a~~~~a~~~~ 1040 (1374)
+.+.+++.+.+..+......+...+...+..++ ..+...+.++++... .+. .+.|.+.. +.....
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~il~~g~~~v~~g~----ls~G~l~a----~~~~~~ 412 (694)
T TIGR03375 346 FQRRWEQTVAALARSGLKSRFLSNLATNFAQFI-----QQLVSVAIVVVGVYLISDGE----LTMGGLIA----CVMLSG 412 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHcCC----CCHHHHHH----HHHHHH
Confidence 655555555544433222211111111111111 111111122222211 111 12233322 222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCC-cccccccc
Q 000647 1041 QSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQL 1119 (1374)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~l 1119 (1374)
+.+..+..+.....++.+...+.+|+.++.+.+++.++ ... .. +.....|.|+|+||+|+||+ .+++|+|+
T Consensus 413 ~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~-----~~~-~~--~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i 484 (694)
T TIGR03375 413 RALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE-----GTR-FL--HRPRLQGEIEFRNVSFAYPGQETPALDNV 484 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC-----CCC-CC--CCCCccceEEEEEEEEEeCCCCccceeee
Confidence 44556666677777888888999999998765322111 000 00 01113578999999999986 57899999
Q ss_pred eEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCC
Q 000647 1120 TFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLS 1197 (1374)
Q Consensus 1120 s~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~ 1197 (1374)
||+|+|||++||||+||||||||+++|.|+|+|.+|+|.+||+|++++ +.+|++|++|||||++|+|||||||.++.+
T Consensus 485 ~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~ 564 (694)
T TIGR03375 485 SLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAP 564 (694)
T ss_pred eEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCC
Confidence 999999999999999999999999999999999999999999999988 578999999999999999999999987632
Q ss_pred hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhh
Q 000647 1198 REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLC 1276 (1374)
Q Consensus 1198 ~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~ 1276 (1374)
+.+|++++++++.+++.++++.+|+||||.+ ++|.+|||||||||||
T Consensus 565 ----------------------~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlal---------- 612 (694)
T TIGR03375 565 ----------------------YADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVAL---------- 612 (694)
T ss_pred ----------------------CCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHH----------
Confidence 2457778899999999999999999999997 5789999999999999
Q ss_pred hcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhc
Q 000647 1277 SINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFH 1354 (1374)
Q Consensus 1277 ~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~ 1354 (1374)
||||+++|+|+|||||||+||.++|+.+++.+++ .++|+|+||||+++++.+
T Consensus 613 --------------------------ARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~ 666 (694)
T TIGR03375 613 --------------------------ARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLV 666 (694)
T ss_pred --------------------------HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhC
Confidence 9999999999999999999999999999886654 489999999999999999
Q ss_pred cceEEEEcC
Q 000647 1355 SLELRLIDG 1363 (1374)
Q Consensus 1355 ~~~l~l~~g 1363 (1374)
|+++.+.+|
T Consensus 667 D~iivl~~G 675 (694)
T TIGR03375 667 DRIIVMDNG 675 (694)
T ss_pred CEEEEEeCC
Confidence 999999655
No 76
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=3.9e-52 Score=521.20 Aligned_cols=464 Identities=17% Similarity=0.186 Sum_probs=303.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHH----H
Q 000647 805 VLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGL----V 879 (1374)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~----~ 879 (1374)
++..++..++.+...++..++..+...++...+++++++.+ .||+..+ ..+..+|+++|++.+...+... +
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~----~g~~~~~l~~di~~i~~~~~~~~~~~~ 126 (529)
T TIGR02857 51 ALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVAALGPGWLQGRP----SGELATLALEGVEALDGYFARYLPQLV 126 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhccCC----hHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 33344444555555666667777777777788888877764 6665322 2456899999998876544332 2
Q ss_pred HHhhH---hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhh
Q 000647 880 TGMVK---PSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAF 956 (1374)
Q Consensus 880 ~~~~~---~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~ 956 (1374)
..++. .++.++++.|.++.+... .++..+++...+.+ .......+.....+.........-.+.+++..
T Consensus 127 ~~~~~~~~~~~~l~~~~~~l~~~~l~----~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~ 198 (529)
T TIGR02857 127 LAVIIPLAILAAVFPADWISGLILLL----TAPLIPIFMILIGW----AAQAAARKQWAALSRLSGHFLDRLRGLPTLKL 198 (529)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH----HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 22222 223345567766554311 11111111111111 11111222222222222222222235688888
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh-hcccchhhhhhhHHHHHHHHH
Q 000647 957 FGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME-HKGDRALVSTQGELAHALRFL 1035 (1374)
Q Consensus 957 ~~g~~~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~a~~~~ 1035 (1374)
|+.+..+...+++..++..+......+...+......++.. + ...++.++.+.. ..+. .+.+.+.. +
T Consensus 199 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~g~----~t~g~~~~----~ 266 (529)
T TIGR02857 199 FGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT-L---SVALVAVYIGFRLLAGD----LDLATGLF----V 266 (529)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHcCC----CCHHHHHH----H
Confidence 88766665555444444333322222211111111111110 1 011111111111 1121 12222221 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCc-cc
Q 000647 1036 ASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ-KL 1114 (1374)
Q Consensus 1036 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~-~~ 1114 (1374)
..+..+.+..+..+......+.....+.+|+.++.+.. ++. ... .+...+. .+.|+|+||+|.||+. ++
T Consensus 267 ~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~---~~~--~~~--~~~~~~~---~~~i~~~~v~f~y~~~~~~ 336 (529)
T TIGR02857 267 LLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAP---RPL--AGK--APVTAAP---APSLEFSGLSVAYPGRRAP 336 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---ccc--CCC--cCCCCCC---CCeEEEEEEEEECCCCCcc
Confidence 22233444556666667777788888999999987521 110 000 0111111 3679999999999874 58
Q ss_pred ccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHh
Q 000647 1115 LARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQI 1192 (1374)
Q Consensus 1115 vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl 1192 (1374)
+|+|+||+|+|||+++||||||||||||+++|.|+|+|.+|+|.+||.|++++ +.+|+++++|||||++|+|||||||
T Consensus 337 il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni 416 (529)
T TIGR02857 337 ALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENI 416 (529)
T ss_pred cccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999988 4678899999999999999999999
Q ss_pred ccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchh
Q 000647 1193 IYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLV 1271 (1374)
Q Consensus 1193 ~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~ 1271 (1374)
.++.+ +..|++++++++.++++++++++|+||||.+ ++|.+||||||||+++
T Consensus 417 ~~~~~----------------------~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~l----- 469 (529)
T TIGR02857 417 RLARP----------------------DASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLAL----- 469 (529)
T ss_pred hccCC----------------------CCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHH-----
Confidence 87642 1346778899999999999999999999997 4789999999999999
Q ss_pred hHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCC
Q 000647 1272 LIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPA 1349 (1374)
Q Consensus 1272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~ 1349 (1374)
|||++++|+|+|||||||+||.++|+.+++.+++ .++|+|+||||++
T Consensus 470 -------------------------------aRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~ 518 (529)
T TIGR02857 470 -------------------------------ARAFLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLA 518 (529)
T ss_pred -------------------------------HHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHH
Confidence 9999999999999999999999999999886654 5899999999999
Q ss_pred chhhccceEEE
Q 000647 1350 LIPFHSLELRL 1360 (1374)
Q Consensus 1350 ~i~~~~~~l~l 1360 (1374)
+++.+|+++.+
T Consensus 519 ~~~~~d~i~~l 529 (529)
T TIGR02857 519 LAERADRIVVL 529 (529)
T ss_pred HHHhCCEEEeC
Confidence 99999988764
No 77
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.5e-53 Score=540.41 Aligned_cols=192 Identities=23% Similarity=0.277 Sum_probs=151.0
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEe
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 1177 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~V 1177 (1374)
..|+++||++.|++.+.+|+|+||+|++|++++|+||||||||||+++|.|+.+|.+|+|.+++. .+|+|+
T Consensus 507 ~~L~~~~ls~~y~~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~~---------~~igyv 577 (718)
T PLN03073 507 PIISFSDASFGYPGGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSAK---------VRMAVF 577 (718)
T ss_pred ceEEEEeeEEEeCCCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECCc---------eeEEEE
Confidence 35999999999976667999999999999999999999999999999999999999999987653 469999
Q ss_pred cCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCch-hhhhhccCCccccccccCC
Q 000647 1178 PQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY-LLEREEVGWDANLNWEDIL 1256 (1374)
Q Consensus 1178 pQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~-~v~~~~~Gldt~~~~g~~L 1256 (1374)
||+|+. .-++.+|..... ... .....++++.++|+.+++.. ...+ ....|
T Consensus 578 ~Q~~~~-~l~~~~~~~~~~---------~~~---------~~~~~~~~i~~~L~~~gl~~~~~~~----------~~~~L 628 (718)
T PLN03073 578 SQHHVD-GLDLSSNPLLYM---------MRC---------FPGVPEQKLRAHLGSFGVTGNLALQ----------PMYTL 628 (718)
T ss_pred eccccc-cCCcchhHHHHH---------HHh---------cCCCCHHHHHHHHHHCCCChHHhcC----------Ccccc
Confidence 999742 224444432110 000 00123456777888887742 2211 24679
Q ss_pred ChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh
Q 000647 1257 SLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD 1336 (1374)
Q Consensus 1257 SgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~ 1336 (1374)
|||||||++| |||++++|++|||||||++||.++.+.+.+.++.
T Consensus 629 SgGqkqRvaL------------------------------------AraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~ 672 (718)
T PLN03073 629 SGGQKSRVAF------------------------------------AKITFKKPHILLLDEPSNHLDLDAVEALIQGLVL 672 (718)
T ss_pred CHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999998888776665
Q ss_pred cCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1337 MGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1337 ~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
.+.|+|+|+|++..+. +.++++.+.+|
T Consensus 673 ~~gtvIivSHd~~~i~~~~drv~~l~~G 700 (718)
T PLN03073 673 FQGGVLMVSHDEHLISGSVDELWVVSEG 700 (718)
T ss_pred cCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 4459999999997765 57888888654
No 78
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-54 Score=486.52 Aligned_cols=259 Identities=23% Similarity=0.278 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCccccc
Q 000647 1037 SVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLA 1116 (1374)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL 1116 (1374)
.++.|.......+-.+++.+.+.---+++++++.+..++..+ .|+..|-...+|.|+|+||+|.|..+++||
T Consensus 483 TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd--------~P~a~pl~~~~G~i~fsnvtF~Y~p~k~vl 554 (790)
T KOG0056|consen 483 TYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVD--------LPGAPPLKVTQGKIEFSNVTFAYDPGKPVL 554 (790)
T ss_pred HHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhc--------CCCCCCccccCCeEEEEEeEEecCCCCcee
Confidence 445566555555556677776666677899998765433211 112223334579999999999999999999
Q ss_pred ccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhcc
Q 000647 1117 RQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIY 1194 (1374)
Q Consensus 1117 ~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~y 1194 (1374)
+|+||++.||++||+|||||+||||++++|+||||..+|+|+|||+||+.+ +.+|++|++||||.+||+.||-+||.|
T Consensus 555 ~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIry 634 (790)
T KOG0056|consen 555 SDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRY 634 (790)
T ss_pred ecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheee
Confidence 999999999999999999999999999999999999999999999999998 689999999999999999999999999
Q ss_pred CCC--hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchh
Q 000647 1195 PLS--REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLV 1271 (1374)
Q Consensus 1195 p~~--~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~ 1271 (1374)
+.+ .+|+..+|+++ +++++.+-..|+||+|.+ ++|-.||||||||+||
T Consensus 635 ak~~AsneevyaAAkA------------------------A~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAi----- 685 (790)
T KOG0056|consen 635 AKPSASNEEVYAAAKA------------------------AQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAI----- 685 (790)
T ss_pred cCCCCChHHHHHHHHH------------------------hhHHHHHhcCchhhhhhhhhcccccCCcchhhHHH-----
Confidence 764 23333444443 333444556799999998 5899999999999999
Q ss_pred hHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCC
Q 000647 1272 LIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPA 1349 (1374)
Q Consensus 1272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~ 1349 (1374)
||+++++|.|++|||||||||..+|+++|..+.. .++|.|+||||++
T Consensus 686 -------------------------------ARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLS 734 (790)
T KOG0056|consen 686 -------------------------------ARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLS 734 (790)
T ss_pred -------------------------------HHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeeh
Confidence 9999999999999999999999999999985543 6999999999999
Q ss_pred chhhccceEEEEcC
Q 000647 1350 LIPFHSLELRLIDG 1363 (1374)
Q Consensus 1350 ~i~~~~~~l~l~~g 1363 (1374)
|+-..|.+|.+.+|
T Consensus 735 TivnAD~ILvi~~G 748 (790)
T KOG0056|consen 735 TIVNADLILVISNG 748 (790)
T ss_pred heecccEEEEEeCC
Confidence 99999999999654
No 79
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.6e-52 Score=480.42 Aligned_cols=208 Identities=26% Similarity=0.343 Sum_probs=192.0
Q ss_pred CCCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccE
Q 000647 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 1174 (1374)
Q Consensus 1097 ~g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i 1174 (1374)
.|.|+|+||+|+|+..++||+|+||+|++||||||||+|||||||++++|+||+| .+|+|.|||+||+++ +.+|+-|
T Consensus 349 ~~~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~I 427 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSI 427 (591)
T ss_pred CCcEEEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhhe
Confidence 6789999999999988899999999999999999999999999999999999999 999999999999998 5789999
Q ss_pred EEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccc
Q 000647 1175 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWE 1253 (1374)
Q Consensus 1175 ~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g 1253 (1374)
++||||..||++||-+||.||... ..|+++.++.+..++++.+.++|+||+|.+ ++|
T Consensus 428 g~VPQd~~LFndTIl~NI~YGn~s----------------------as~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG 485 (591)
T KOG0057|consen 428 GVVPQDSVLFNDTILYNIKYGNPS----------------------ASDEEVVEACKRAGLHDVISRLPDGYQTLVGERG 485 (591)
T ss_pred eEeCCcccccchhHHHHhhcCCCC----------------------cCHHHHHHHHHHcCcHHHHHhccccchhhHhhcc
Confidence 999999999999999999998652 345566667777788888999999999998 589
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||||||||++| |||++++|.|+++|||||+||.++|+.+.++
T Consensus 486 ~~LSGGekQrvsl------------------------------------aRa~lKda~Il~~DEaTS~LD~~TE~~i~~~ 529 (591)
T KOG0057|consen 486 LMLSGGEKQRVSL------------------------------------ARAFLKDAPILLLDEATSALDSETEREILDM 529 (591)
T ss_pred cccccchHHHHHH------------------------------------HHHHhcCCCeEEecCcccccchhhHHHHHHH
Confidence 9999999999999 9999999999999999999999999998887
Q ss_pred HHh--cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1334 AKD--MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1334 ~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
+.+ .|+|+|.|+||+++++..|.++.+..|
T Consensus 530 i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG 561 (591)
T KOG0057|consen 530 IMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNG 561 (591)
T ss_pred HHHhcCCCeEEEEEecchhHhcCCEEEEEECC
Confidence 654 599999999999999999999999443
No 80
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.7e-51 Score=521.86 Aligned_cols=255 Identities=20% Similarity=0.240 Sum_probs=218.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCcccccccc
Q 000647 1040 SQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQL 1119 (1374)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~l 1119 (1374)
......+..+......+.+...+.+|+.++.+..++ + ... ...++ ..++|+|+||+|.||+++++|+|+
T Consensus 292 ~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~--~----~~~--~~~~~---~~~~i~~~~v~f~y~~~~~il~~i 360 (592)
T PRK10790 292 GRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQ--Q----YGN--DDRPL---QSGRIDIDNVSFAYRDDNLVLQNI 360 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--c----CCC--CccCC---CCCeEEEEEEEEEeCCCCceeece
Confidence 344455566666677777888899999998754211 0 000 01111 247899999999998777899999
Q ss_pred eEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCC
Q 000647 1120 TFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLS 1197 (1374)
Q Consensus 1120 s~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~ 1197 (1374)
||+|+|||++||||+||||||||+++|.|+|+|.+|+|.+||.|++++ +.+|++|+||||||++|+|||||||.++.+
T Consensus 361 ~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~ 440 (592)
T PRK10790 361 NLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRD 440 (592)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999988 478899999999999999999999987632
Q ss_pred hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhh
Q 000647 1198 REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLC 1276 (1374)
Q Consensus 1198 ~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~ 1276 (1374)
..|++++++++.++++++++++|+||||.+ +.|.+|||||||||||
T Consensus 441 -----------------------~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRial---------- 487 (592)
T PRK10790 441 -----------------------ISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLAL---------- 487 (592)
T ss_pred -----------------------CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHH----------
Confidence 346778899999999999999999999997 4689999999999999
Q ss_pred hcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhc
Q 000647 1277 SINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFH 1354 (1374)
Q Consensus 1277 ~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~ 1354 (1374)
||||+++|+|+|||||||+||.++|+.+.+.++. .++|+|+||||+++++..
T Consensus 488 --------------------------ARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~ 541 (592)
T PRK10790 488 --------------------------ARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEA 541 (592)
T ss_pred --------------------------HHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhC
Confidence 9999999999999999999999999999886654 489999999999999999
Q ss_pred cceEEEEcCC
Q 000647 1355 SLELRLIDGE 1364 (1374)
Q Consensus 1355 ~~~l~l~~g~ 1364 (1374)
|+++.+.+|+
T Consensus 542 D~ii~l~~G~ 551 (592)
T PRK10790 542 DTILVLHRGQ 551 (592)
T ss_pred CEEEEEECCE
Confidence 9999996654
No 81
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.8e-50 Score=551.29 Aligned_cols=457 Identities=18% Similarity=0.218 Sum_probs=303.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLC 243 (1374)
Q Consensus 165 ~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 243 (1374)
.++...+....-.+..+++|++.+++..+.+++|++++ .++..+|+++|++.+.+.+...+..++..++..+.... ++
T Consensus 970 ~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i-~i 1048 (1622)
T PLN03130 970 TLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFV-LI 1048 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 34444444444446788899999999999999999865 56999999999999888776666555555443332211 12
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH----HHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHH
Q 000647 244 SYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLE----GEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKA 319 (1374)
Q Consensus 244 ~~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e----~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~ 319 (1374)
.+++| +.+++++.+++....+. ..+.+...+..+.+ +..-.......++.++|+.|+.+++..+...+..+.
T Consensus 1049 ~~~~~-~~~~~~~pl~~~~~~~~---~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~ 1124 (1622)
T PLN03130 1049 GIVST-ISLWAIMPLLVLFYGAY---LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDN 1124 (1622)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHH
Confidence 22333 22222211111111111 11112222222222 222233444555788899999987655433333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc-cccCC---ccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 320 LTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAG-NLKPD---TSTLGRAKMLSNLRYHTSVIISLFQSLGT 395 (1374)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g-~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 395 (1374)
..+..........|.+....++ +..+.++......+.+ ..... ..+.|. ++ ++...+...+..
T Consensus 1125 ~~~~~~~~~~~~~wl~~~l~~~----~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~--~l-------s~~~~~~~~l~~ 1191 (1622)
T PLN03130 1125 NIRFTLVNMSSNRWLAIRLETL----GGLMIWLTASFAVMQNGRAENQAAFASTMGL--LL-------SYALNITSLLTA 1191 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHcccccccchhhhHHHHH--HH-------HHHHHHHHHHHH
Confidence 2221111111222333222221 1111111100001111 11000 011221 11 122333344445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEE
Q 000647 396 LSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNL 474 (1374)
Q Consensus 396 ~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~ 474 (1374)
+......++....+++|+.++++.+++.+...+. ......++..+.|+|+||+|.|+++ +++|+|+||+|++||++
T Consensus 1192 l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~---~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekV 1268 (1622)
T PLN03130 1192 VLRLASLAENSLNAVERVGTYIDLPSEAPLVIEN---NRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKV 1268 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccccccC---CCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEE
Confidence 5555566788889999999998765543210000 0011122345689999999999654 57999999999999999
Q ss_pred EEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCH
Q 000647 475 LITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTH 548 (1374)
Q Consensus 475 ~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~ 548 (1374)
+||||||||||||+++|.|+++|++|+|.+||.+ .++|++|++|||+|.+|+|||||||.++. +.+|
T Consensus 1269 aIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-------~~td 1341 (1622)
T PLN03130 1269 GIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-------EHND 1341 (1622)
T ss_pred EEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-------CCCH
Confidence 9999999999999999999999999999999976 35789999999999999999999998753 2478
Q ss_pred HHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--
Q 000647 549 GGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA-- 623 (1374)
Q Consensus 549 ~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~-- 623 (1374)
++++++++.++++++++++|.+.++ +.|.+||||||||++|||||+++|+|+|||||||+||.++++.|.+.+++
T Consensus 1342 eei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~ 1421 (1622)
T PLN03130 1342 ADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF 1421 (1622)
T ss_pred HHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
Confidence 8999999999999999999977665 45779999999999999999999999999999999999999999999986
Q ss_pred cCCEEEEEccChhhHhhccEEEEecC
Q 000647 624 MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 624 ~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
.++|+|+|+||++++..+|+|++|++
T Consensus 1422 ~~~TvI~IAHRL~tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1422 KSCTMLIIAHRLNTIIDCDRILVLDA 1447 (1622)
T ss_pred CCCEEEEEeCChHHHHhCCEEEEEEC
Confidence 48999999999999999999999986
No 82
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.3e-51 Score=520.06 Aligned_cols=457 Identities=18% Similarity=0.220 Sum_probs=296.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHH----HHhhHh---HHH
Q 000647 817 SIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLV----TGMVKP---SVD 888 (1374)
Q Consensus 817 ~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~----~~~~~~---~~~ 888 (1374)
....+..++..+++.++...+++++++.+ .+|+.. ...+..+|++.|++.+...+...+ ..++.. ++.
T Consensus 75 ~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~----~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (588)
T PRK13657 75 LVARHADRLAHRRRLAVLTEYFERIIQLPLAWHSQR----GSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPL 150 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCcC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555666667766777777777754 555432 224568999999988764433322 222222 222
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcHHHHHHHH
Q 000647 889 ILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREKAMIE 968 (1374)
Q Consensus 889 ~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~~e~~~~~ 968 (1374)
+++..|.++++.. ..++++.++...+. +...+...+..+..+.+.........+.+.+..|+.+..+...+.
T Consensus 151 ~~~~~~~l~l~~l----~~~~l~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~ 222 (588)
T PRK13657 151 ALFMNWRLSLVLV----VLGIVYTLITTLVM----RKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALR 222 (588)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHH
Confidence 3455666555431 11111111111111 111111222222222222222222235577888887666665555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 000647 969 SRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASVVSQSFLAF 1046 (1374)
Q Consensus 969 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~a~~~~~~~~~~ 1046 (1374)
+.+.+..+......+...+...+..++. .+...+.++++.. ..+. .+.|.+...+ .++.+.+..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~v~~g~----lt~g~~~a~~----~l~~~~~~~l 289 (588)
T PRK13657 223 DIADNLLAAQMPVLSWWALASVLNRAAS-----TITMLAILVLGAALVQKGQ----LRVGEVVAFV----GFATLLIGRL 289 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCC----cCHHHHHHHH----HHHHHHHHHH
Confidence 5555444432222211111111111111 1111111222211 1121 1233333222 2223344455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCcccccccceEEEeCC
Q 000647 1047 GDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIVPG 1126 (1374)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~ls~~I~~G 1126 (1374)
.++......+.....+++|+.++.+..++.+. ... ...++ ...+.|+|+||+|.||+.+++|+|+||+|+||
T Consensus 290 ~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~----~~~--~~~~~--~~~~~I~~~~vsf~y~~~~~iL~~inl~i~~G 361 (588)
T PRK13657 290 DQVVAFINQVFMAAPKLEEFFEVEDAVPDVRD----PPG--AIDLG--RVKGAVEFDDVSFSYDNSRQGVEDVSFEAKPG 361 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----CCC--CCCcC--CCCCeEEEEEEEEEeCCCCceecceeEEECCC
Confidence 56666666666666777777776543211100 000 00111 12467999999999987678999999999999
Q ss_pred CeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCChhHHHHH
Q 000647 1127 KSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELR 1204 (1374)
Q Consensus 1127 e~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~ 1204 (1374)
|+++|||+||||||||+++|.|+|+|.+|+|.+||.|++++ ..+|+.|+||||||++|+|||||||.++.+
T Consensus 362 ~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~------- 434 (588)
T PRK13657 362 QTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRP------- 434 (588)
T ss_pred CEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCC-------
Confidence 99999999999999999999999999999999999999998 467889999999999999999999987632
Q ss_pred HHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhhhcccccc
Q 000647 1205 ALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLCSINKISE 1283 (1374)
Q Consensus 1205 ~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~ 1283 (1374)
+..|++++++++.+++.++++++|+|+||.+ ++|.+|||||||||||
T Consensus 435 ---------------~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRial----------------- 482 (588)
T PRK13657 435 ---------------DATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAI----------------- 482 (588)
T ss_pred ---------------CCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHH-----------------
Confidence 2357778999999999999999999999987 4788999999999999
Q ss_pred hhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEE
Q 000647 1284 LDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLI 1361 (1374)
Q Consensus 1284 ~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~~~~l~l~ 1361 (1374)
||||+++|+|+|||||||+||.++|+.+++.++. .++|+|+||||+++++.+|+++.+.
T Consensus 483 -------------------ARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~ 543 (588)
T PRK13657 483 -------------------ARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFD 543 (588)
T ss_pred -------------------HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEE
Confidence 9999999999999999999999999999886654 4899999999999999999999996
Q ss_pred cCC
Q 000647 1362 DGE 1364 (1374)
Q Consensus 1362 ~g~ 1364 (1374)
+|+
T Consensus 544 ~G~ 546 (588)
T PRK13657 544 NGR 546 (588)
T ss_pred CCE
Confidence 653
No 83
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.3e-50 Score=551.49 Aligned_cols=447 Identities=17% Similarity=0.176 Sum_probs=311.9
Q ss_pred HHHHHHHHHHHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 000647 177 KIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWIL 255 (1374)
Q Consensus 177 ~~lt~~l~~~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l 255 (1374)
....+++|++.+++....+++|++.. .+...+|+++|++.+.+.+...+..++..++..+.. ..++.+.+|.+++.++
T Consensus 1034 ~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~-li~~~~~~~~~~~~~~ 1112 (1522)
T TIGR00957 1034 IQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGA-LIVILLATPIAAVIIP 1112 (1522)
T ss_pred HHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 35777888888999999999999764 468889999999999888776666555554433322 1222234443332222
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 256 AYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFG 335 (1374)
Q Consensus 256 ~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~ 335 (1374)
...++...+.++..+....+....++..+..-........+.++|+.|+.|+...++..+..+...+..........|++
T Consensus 1113 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 1192 (1522)
T TIGR00957 1113 PLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLA 1192 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22221111222222222222221222223333344555567889999999998776555555444433333233334444
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhh-cccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 336 MIQDFLLKYLGATVAVILIIEPFF-AGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIH 414 (1374)
Q Consensus 336 ~~~~~~~~~~~~~~~~il~~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~ 414 (1374)
....++. ..+.+++....++ .|. .+.|... . +..+...+..++..+......++....+++|+.
T Consensus 1193 ~~~~~~~----~~~~~~~~~~~v~~~~~-----~~~g~l~--~----~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~ 1257 (1522)
T TIGR00957 1193 VRLECVG----NCIVLFAALFAVISRHS-----LSAGLVG--L----SVSYSLQVTFYLNWLVRMSSEMETNIVAVERLK 1257 (1522)
T ss_pred HHHHHHH----HHHHHHHHHHHHHhcCC-----CCHHHHH--H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322221 1111111110111 122 2333221 1 122334455667777788888999999999999
Q ss_pred HHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCC
Q 000647 415 ELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGG 493 (1374)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~G 493 (1374)
++++.+++...... .......++..+.|+|+||++.|+++ +++|+|+||+|++||+++|||+||||||||+++|.|
T Consensus 1258 ~~~~~~~e~~~~~~---~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~r 1334 (1522)
T TIGR00957 1258 EYSETEKEAPWQIQ---ETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFR 1334 (1522)
T ss_pred HHhcCCCCcccccc---CCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 99866544221000 00111123345789999999999764 579999999999999999999999999999999999
Q ss_pred CCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcC
Q 000647 494 LWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRY 567 (1374)
Q Consensus 494 l~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~ 567 (1374)
+++|++|+|.+||.+ .++|++|++|||+|++|+|||||||.... ..++++++++++.++++++++++
T Consensus 1335 l~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-------~~sdeei~~al~~a~l~~~I~~l 1407 (1522)
T TIGR00957 1335 INESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-------QYSDEEVWWALELAHLKTFVSAL 1407 (1522)
T ss_pred CccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-------CCCHHHHHHHHHHcCcHHHHhhC
Confidence 999999999999976 35789999999999999999999997321 25788999999999999999999
Q ss_pred CCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhcc
Q 000647 568 PPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHD 642 (1374)
Q Consensus 568 ~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d 642 (1374)
|.+.++ +.|.+||||||||++|||||+++|+|+|||||||+||.++++.|.+.+++ .++|+|+|+||++.+..+|
T Consensus 1408 p~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~D 1487 (1522)
T TIGR00957 1408 PDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYT 1487 (1522)
T ss_pred ccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCC
Confidence 877655 45789999999999999999999999999999999999999999999986 4899999999999999999
Q ss_pred EEEEecC
Q 000647 643 VVLSLDG 649 (1374)
Q Consensus 643 ~il~l~~ 649 (1374)
+|++|++
T Consensus 1488 rIlVld~ 1494 (1522)
T TIGR00957 1488 RVIVLDK 1494 (1522)
T ss_pred EEEEEEC
Confidence 9999985
No 84
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=4.6e-50 Score=503.33 Aligned_cols=507 Identities=12% Similarity=0.072 Sum_probs=338.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTR 186 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~~ 186 (1374)
++..+++.++.....+..+.+.+.+++.....+ . ..+..++++ .++..+..|+...+..+...++..+++.+
T Consensus 20 ~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~-~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~lR~~ 91 (555)
T TIGR01194 20 TAFSIALGLAGGLAIIALLASINNAIHEENFLG-Q---GSLFSFGGL----CLLALLFRIGADIFPAYAGMHIIANLRIA 91 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-c---hHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455566666677777777777665321000 0 111111122 22233445555556666666788899999
Q ss_pred HhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 000647 187 YFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMM 265 (1374)
Q Consensus 187 yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i~ 265 (1374)
.+++....++.++++ ..++..+|+++|++.+.+.+.. +..++..++..+ ....++.+++|.+++++++.+++..++.
T Consensus 92 l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~-~~~~~l~~~~~~L~li~l~~~~~~~~~~ 169 (555)
T TIGR01194 92 LCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFF-FCIAYLAYLSVPMFAITISAIIIGTAAQ 169 (555)
T ss_pred HHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999888765 4679999999999998877654 334444433322 2223344668877776655555444444
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 266 RNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGEN--KEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLK 343 (1374)
Q Consensus 266 ~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~--~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1374)
.+..+...+...+.++..+++.........+.+.|+.|+.++ .+.+++++..++..+...+ ..............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 246 (555)
T TIGR01194 170 LLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHII---EILIFIAAENFGQL 246 (555)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 445555555555566666666666666667889999999854 3343333333333222211 11111111111110
Q ss_pred HHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 000647 344 YLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISREL 423 (1374)
Q Consensus 344 ~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~ 423 (1374)
.....++.+++ +++.. +..+.|. +++. ..+...++.++..+......++....+.+|+.++++.+++.
T Consensus 247 ~~~~~~~~~~~----~~~~~--~~~t~g~--l~a~----~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~ 314 (555)
T TIGR01194 247 LFFLLIGCALF----AAAMF--ASIDAAA--ISAF----VLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEP 314 (555)
T ss_pred HHHHHHHHHHH----HHHHh--cCCCHHH--HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 01111111111 11111 2234443 2222 22334455677778888889999999999999997642211
Q ss_pred cccCCCCCCCCCC--CccCCCCcEEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC
Q 000647 424 SIEDKSPQRNGSR--NYFSEANYIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL 497 (1374)
Q Consensus 424 ~~~~~~~~~~~~~--~~~~~~~~i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~ 497 (1374)
............. ......+.|+++||+|.|++. +++|+|+||++++||+++|+||||||||||+++|+|+++|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p 394 (555)
T TIGR01194 315 EPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIP 394 (555)
T ss_pred cccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 0000000000000 000123569999999999753 3699999999999999999999999999999999999999
Q ss_pred CccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCc
Q 000647 498 VSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEK 571 (1374)
Q Consensus 498 ~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~ 571 (1374)
++|+|.++|.+ .+++++++||+|+|++|++|+++|+ .+ ..+++++.++++.++++++++++|.+.
T Consensus 395 ~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~-~~--------~~~~~~~~~~~~~~~l~~~~~~lp~g~ 465 (555)
T TIGR01194 395 QEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE-GE--------HASLDNAQQYLQRLEIADKVKIEDGGF 465 (555)
T ss_pred CCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc-cc--------chhHHHHHHHHHHcCCchhhccccccc
Confidence 99999999865 2456889999999999999999995 11 246678899999999999999998776
Q ss_pred cccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHH----hcCCEEEEEccChhhHhhccEEEEe
Q 000647 572 EINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALVAFHDVVLSL 647 (1374)
Q Consensus 572 ~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~----~~~~TiI~vtH~~~~~~~~d~il~l 647 (1374)
++. .+||||||||++||||++++|+++|||||||+||+++++.+++.+. ..++|+|+||||++.++.+|+|+++
T Consensus 466 ~t~--~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l 543 (555)
T TIGR01194 466 STT--TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKL 543 (555)
T ss_pred CCc--ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEE
Confidence 553 6899999999999999999999999999999999999999987542 3589999999999999999999999
Q ss_pred cC
Q 000647 648 DG 649 (1374)
Q Consensus 648 ~~ 649 (1374)
++
T Consensus 544 ~~ 545 (555)
T TIGR01194 544 AA 545 (555)
T ss_pred EC
Confidence 85
No 85
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=3.1e-52 Score=520.13 Aligned_cols=182 Identities=25% Similarity=0.290 Sum_probs=151.7
Q ss_pred eEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEE-----------eCCCC-c----c---
Q 000647 450 VKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIA-----------KPGVG-S----D--- 510 (1374)
Q Consensus 450 v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~-----------~~g~~-~----~--- 510 (1374)
+++.|..+..+|++++ .+++||+++|+||||||||||+|+|+|+++|++|+|. ++|.+ . .
T Consensus 79 ~~~~yg~~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~~~~ 157 (590)
T PRK13409 79 PVHRYGVNGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKKLYN 157 (590)
T ss_pred ceEEecCCceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHHHhc
Confidence 5667754456999999 9999999999999999999999999999999999997 67754 1 1
Q ss_pred ccccEEEEe----cCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHH
Q 000647 511 LNKEIFYVP----QRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQR 586 (1374)
Q Consensus 511 ~~~~i~~v~----Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1374)
.+.++++.+ |.|.++.+|++|++.+. ...+++.++++.++|.+..++.+ .+||||||||
T Consensus 158 ~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~---------~~~~~~~~~l~~l~l~~~~~~~~--------~~LSgGe~qr 220 (590)
T PRK13409 158 GEIKVVHKPQYVDLIPKVFKGKVRELLKKV---------DERGKLDEVVERLGLENILDRDI--------SELSGGELQR 220 (590)
T ss_pred cCcceeecccchhhhhhhhcchHHHHHHhh---------hHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHH
Confidence 112345444 45666778999999642 12346788999999988777765 5899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhc--CCEEEEEccChhhHh-hccEEEEecC
Q 000647 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 587 lalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~--~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++|||||+++|+++||||||++||+.....+.+.+++. |+|+|+||||++.+. .+|+++++.+
T Consensus 221 v~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~ 286 (590)
T PRK13409 221 VAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYG 286 (590)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999999999998887654 899999999999885 6899999864
No 86
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.7e-50 Score=512.01 Aligned_cols=462 Identities=16% Similarity=0.184 Sum_probs=308.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHHHH----hhH---
Q 000647 813 FIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTG----MVK--- 884 (1374)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~~----~~~--- 884 (1374)
+......++..++..++...+...+++++++.+ .+|+..+ ..+..+|++.|++.+.......+.. ++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~----~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~ 148 (576)
T TIGR02204 73 LGTAARFYLVTWLGERVVADIRRAVFAHLISLSPSFFDKNR----SGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIG 148 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHccCC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455566666666777777777777754 5554322 2456789999999886544332222 211
Q ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcHHHH
Q 000647 885 PSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGAREK 964 (1374)
Q Consensus 885 ~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~~e~ 964 (1374)
.++.++++.|.++.+... .+.++++.. ....+...+...+..+..+.+.........+.+++..++.+..+.
T Consensus 149 ~~~~~~~~~~~l~~~~l~----~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~ 220 (576)
T TIGR02204 149 GLIMMFITSPKLTSLVLL----AVPLVLLPI----LLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAER 220 (576)
T ss_pred HHHHHHHHhHHHHHHHHH----HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHH
Confidence 223344556666554321 111111111 111112223334444444444444445555678899988776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHHHHHHHHH
Q 000647 965 AMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASVVSQS 1042 (1374)
Q Consensus 965 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~a~~~~~~ 1042 (1374)
..+++.+++..+......+...++..+..++ ..+...+.++++.. ..+.. +.|.+.. +.....+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~v~~g~l----t~g~~~~----~~~~~~~~ 287 (576)
T TIGR02204 221 SRFGGAVEKAYEAARQRIRTRALLTAIVIVL-----VFGAIVGVLWVGAHDVIAGKM----SAGTLGQ----FVFYAVMV 287 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHcCCC----CHHHHHH----HHHHHHHH
Confidence 6665555555443322222111111111111 01111111222111 11111 1222221 12223344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCc--ccccccce
Q 000647 1043 FLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ--KLLARQLT 1120 (1374)
Q Consensus 1043 ~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~--~~vL~~ls 1120 (1374)
+..+..+......+.+...+.+|+.++.+..++.+. .....+..++ ..+.|+|+||+|.||+. +++|+|+|
T Consensus 288 ~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~----~~~~~~~~~~---~~~~i~~~~v~f~y~~~~~~~iL~~in 360 (576)
T TIGR02204 288 AGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKA----PAHPKTLPVP---LRGEIEFEQVNFAYPARPDQPALDGLN 360 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCC----CCCCccCCcC---CCceEEEEEEEEECCCCCCCcccccee
Confidence 556667777777888888999999998754221111 0000011111 24679999999999863 68999999
Q ss_pred EEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCCh
Q 000647 1121 FEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSR 1198 (1374)
Q Consensus 1121 ~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~ 1198 (1374)
|+|+|||+++|+|+||||||||+++|.|+|+|.+|+|.+||.|++++ ..+|++|+||||||++|+|||||||.++.+
T Consensus 361 l~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~- 439 (576)
T TIGR02204 361 LTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRP- 439 (576)
T ss_pred EEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCC-
Confidence 99999999999999999999999999999999999999999999987 467788999999999999999999988643
Q ss_pred hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhhh
Q 000647 1199 EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLCS 1277 (1374)
Q Consensus 1199 ~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~~ 1277 (1374)
+..|++++++++.+++.++++++|+|+||.+ ++|.+||||||||||+
T Consensus 440 ---------------------~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~l----------- 487 (576)
T TIGR02204 440 ---------------------DATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAI----------- 487 (576)
T ss_pred ---------------------CCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHH-----------
Confidence 1246778999999999999999999999997 4789999999999999
Q ss_pred cccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhcc
Q 000647 1278 INKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHS 1355 (1374)
Q Consensus 1278 ~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~~ 1355 (1374)
|||++++|+|+|||||||+||.++++.+++.++. .++|+|+||||++.++.+|
T Consensus 488 -------------------------aRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d 542 (576)
T TIGR02204 488 -------------------------ARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKAD 542 (576)
T ss_pred -------------------------HHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCC
Confidence 9999999999999999999999999988876654 5899999999999999999
Q ss_pred ceEEEEcCC
Q 000647 1356 LELRLIDGE 1364 (1374)
Q Consensus 1356 ~~l~l~~g~ 1364 (1374)
+++.+.+|+
T Consensus 543 ~vi~l~~g~ 551 (576)
T TIGR02204 543 RIVVMDQGR 551 (576)
T ss_pred EEEEEECCE
Confidence 999997654
No 87
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.8e-49 Score=541.06 Aligned_cols=449 Identities=17% Similarity=0.213 Sum_probs=312.7
Q ss_pred HHHHHHHHHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 000647 179 VTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAY 257 (1374)
Q Consensus 179 lt~~l~~~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~ 257 (1374)
..+++|++.+++..+.++.|+|.. .++..+|+++|++.+.+.+...+..++..++..+... .++.+.+|...+.++.+
T Consensus 1029 ~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~l-i~~~~~~p~~~~~~i~~ 1107 (1560)
T PTZ00243 1029 GSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSI-LVTSASQPFVLVALVPC 1107 (1560)
T ss_pred HHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 456888999999999999999864 5689999999999998887766655555444333222 22233444222211111
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHH----HHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 258 VLGAGTMMRNFSPAFGKLMSKEQQ----LEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWW 333 (1374)
Q Consensus 258 ~~~~~~i~~~~~~~l~~l~~~~q~----~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~ 333 (1374)
+ ++...+...+.+...+.++ ..+..-........+.++|+.|+.|+.+.+++.+..+...+..........|
T Consensus 1108 ~----~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w 1183 (1560)
T PTZ00243 1108 G----YLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRW 1183 (1560)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111222223333222222 2233334555556688999999999999887777777666555444444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 334 FGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRI 413 (1374)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri 413 (1374)
.+....++...+...++++.+. ..+.+. +..+.|... .+..+...+...+..+......++....+++|+
T Consensus 1184 ~~~~~~~l~~~~~~~~~~~~~~-~~~~~~---~~~~~g~l~------~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi 1253 (1560)
T PTZ00243 1184 LGVRVEFLSNIVVTVIALIGVI-GTMLRA---TSQEIGLVS------LSLTMAMQTTATLNWLVRQVATVEADMNSVERL 1253 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhcc---CCCCHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554443321111111111111 011111 112333211 112233445566677777778888889999999
Q ss_pred HHHHhhcccccccC--C-------------C------CCCCCCC---CccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEE
Q 000647 414 HELMVISRELSIED--K-------------S------PQRNGSR---NYFSEANYIEFSGVKVVTPTG-NVLVENLTLKV 468 (1374)
Q Consensus 414 ~~~~~~~~~~~~~~--~-------------~------~~~~~~~---~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i 468 (1374)
.++++..++.+... . . ....... ...+..+.|+|+||+|.|+++ +++|+|+||+|
T Consensus 1254 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I 1333 (1560)
T PTZ00243 1254 LYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSFRI 1333 (1560)
T ss_pred HHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceEEE
Confidence 99986432211000 0 0 0000000 011124579999999999765 45999999999
Q ss_pred eCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcc
Q 000647 469 EPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE 542 (1374)
Q Consensus 469 ~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~ 542 (1374)
++||+++|||+||||||||+++|+|+++|++|+|.+||.+ .++|++|+||||+|++|+|||||||....
T Consensus 1334 ~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~----- 1408 (1560)
T PTZ00243 1334 APREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFL----- 1408 (1560)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCccc-----
Confidence 9999999999999999999999999999999999999976 35789999999999999999999996431
Q ss_pred cCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccC-CCEEEEecCCCCCCHHHHHHHH
Q 000647 543 VEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHK-PKFAILDECTSAVTTDMEERFC 618 (1374)
Q Consensus 543 ~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~-p~illLDEptsaLD~~~~~~i~ 618 (1374)
..++++++++++.+++++++.++|.+.++ +.|.+|||||||||+|||||+++ |+|||||||||+||+++++.+.
T Consensus 1409 --~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq 1486 (1560)
T PTZ00243 1409 --EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQ 1486 (1560)
T ss_pred --CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHH
Confidence 35788999999999999999999887665 45789999999999999999996 8999999999999999999999
Q ss_pred HHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 619 AKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 619 ~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+.+++ .++|+|+|+||++++..+|+|++|++
T Consensus 1487 ~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~ 1519 (1560)
T PTZ00243 1487 ATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDH 1519 (1560)
T ss_pred HHHHHHCCCCEEEEEeccHHHHHhCCEEEEEEC
Confidence 99876 48999999999999999999999986
No 88
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-50 Score=469.46 Aligned_cols=245 Identities=23% Similarity=0.290 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCc-ccccccceEEEeCCCeE
Q 000647 1051 ELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ-KLLARQLTFEIVPGKSL 1129 (1374)
Q Consensus 1051 ~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v 1129 (1374)
.++.+..+.-.++.|+-++.+..++...+ . ...+.. +..++++||+|.||++ ++||+|+||++++||||
T Consensus 298 ~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~-----~---~~~~~~--~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkv 367 (573)
T COG4987 298 GAFQHLGQVIASARRLNDILDQKPEVTFP-----D---EQTATT--GQALELRNVSFTYPGQQTKALKNFNLTLAQGEKV 367 (573)
T ss_pred hhHHHhhHHHHHHHHHhhhccCCcccCCC-----c---cccCCc--cceeeeccceeecCCCccchhhccceeecCCCeE
Confidence 34444555566778877765433222111 0 111111 1279999999999985 59999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc--CCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHh
Q 000647 1130 LVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALK 1207 (1374)
Q Consensus 1130 ~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~--~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~ 1207 (1374)
||+|||||||||++++|.|-|+|++|+|+..|.++..++ .+|..|++++|+|+||+||||+||....
T Consensus 368 AIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~----------- 436 (573)
T COG4987 368 AILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLAN----------- 436 (573)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcC-----------
Confidence 999999999999999999999999999999999999995 4788999999999999999999996432
Q ss_pred hccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhhhcccccchhh
Q 000647 1208 LHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDW 1286 (1374)
Q Consensus 1208 ~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~ 1286 (1374)
++.+||++|++++.|+|.++++..|+||+|.+ +.|..|||||||||||
T Consensus 437 -----------~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAl-------------------- 485 (573)
T COG4987 437 -----------PDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLAL-------------------- 485 (573)
T ss_pred -----------CCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHH--------------------
Confidence 24679999999999999999999999999998 4789999999999999
Q ss_pred hHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1287 LIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1287 ~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
||+||++..+++|||||.+||..||+++.+++.+ .|.|+|.|+||+.-++..|+++.+.+|
T Consensus 486 ----------------AR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~G 548 (573)
T COG4987 486 ----------------ARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNG 548 (573)
T ss_pred ----------------HHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECC
Confidence 9999999999999999999999999998876644 599999999999999999999999766
No 89
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.6e-49 Score=542.58 Aligned_cols=463 Identities=16% Similarity=0.208 Sum_probs=306.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLC 243 (1374)
Q Consensus 165 ~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 243 (1374)
.+++..+......+..+++|++.+++....++.|++++ .++..+|+++|++.+.+.+...+..++..++..+.... ++
T Consensus 967 ~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i-~~ 1045 (1495)
T PLN03232 967 TFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFA-LI 1045 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 33444344444446888889999999999999998764 56999999999999888777766555544433222111 11
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHH
Q 000647 244 SYASPKYVFWILAYVLGAGTMMRNFSPAF-GKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTR 322 (1374)
Q Consensus 244 ~~~~~~l~~~~l~~~~~~~~i~~~~~~~l-~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~ 322 (1374)
.+.++ +.+++++.+++...+...+..+. ..+........+.+-........+.++|+.|+.+++..+...+..+...+
T Consensus 1046 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~ 1124 (1495)
T PLN03232 1046 GTVST-ISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIR 1124 (1495)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 12222 11111111111111111111111 11111112222222233444555788899999988665433333222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-cccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 323 HMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFF-AGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSR 401 (1374)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 401 (1374)
..........|.+..... ++..+.++......+ .+... ....++ ..+. .+..+...+...+..+.....
T Consensus 1125 ~~~~~~~~~~wl~~~~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~~~--~~~g---~~~~~~~~~~~~l~~l~~~~~ 1194 (1495)
T PLN03232 1125 FTLANTSSNRWLTIRLET----LGGVMIWLTATFAVLRNGNAE-NQAGFA--STMG---LLLSYTLNITTLLSGVLRQAS 1194 (1495)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcccccc-ccccch--HHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 111111112222221111 111111111100011 12110 000111 1111 122334445566777777888
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCC
Q 000647 402 RLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPN 480 (1374)
Q Consensus 402 ~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~s 480 (1374)
.++....+.+|+.++++.+++....... ......++..+.|+|+||+|.|+++ +++|+|+||+|++||+++|||||
T Consensus 1195 ~~~~~~~s~eRi~e~~~~~~e~~~~~~~---~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~S 1271 (1495)
T PLN03232 1195 KAENSLNSVERVGNYIDLPSEATAIIEN---NRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRT 1271 (1495)
T ss_pred HHHHHHHHHHHHHHHhcCCccccccccC---CCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCC
Confidence 8888999999999998765543210000 0011112334679999999999644 67999999999999999999999
Q ss_pred CCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHH
Q 000647 481 GSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVEL 554 (1374)
Q Consensus 481 GsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~ 554 (1374)
|||||||+++|.|+++|++|+|.+||.+ .++|++|+||||+|++|+|||||||.++. ..+|++++++
T Consensus 1272 GSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-------~~sdeei~~a 1344 (1495)
T PLN03232 1272 GAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-------EHNDADLWEA 1344 (1495)
T ss_pred CCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-------CCCHHHHHHH
Confidence 9999999999999999999999999976 35789999999999999999999998753 2578899999
Q ss_pred HHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEE
Q 000647 555 LKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCI 629 (1374)
Q Consensus 555 l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI 629 (1374)
++.++++++++++|.+.++ +.|.+||||||||++|||||+++|+|+|||||||+||.++++.|.+.+++ .++|+|
T Consensus 1345 l~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI 1424 (1495)
T PLN03232 1345 LERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTML 1424 (1495)
T ss_pred HHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999877665 45789999999999999999999999999999999999999999999986 489999
Q ss_pred EEccChhhHhhccEEEEecC
Q 000647 630 TISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 630 ~vtH~~~~~~~~d~il~l~~ 649 (1374)
+||||++++..+|+|++|++
T Consensus 1425 ~IAHRl~ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1425 VIAHRLNTIIDCDKILVLSS 1444 (1495)
T ss_pred EEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999986
No 90
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.9e-51 Score=497.64 Aligned_cols=191 Identities=25% Similarity=0.355 Sum_probs=156.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCC
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 523 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~ 523 (1374)
.|+++|+++.| +++++++|+||++.+|++++|||+||||||||||+|+|...|++|+|..++. -+++|++|+|.
T Consensus 3 ~i~~~~ls~~~-g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----~~v~~l~Q~~~ 76 (530)
T COG0488 3 MITLENLSLAY-GDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----LRVGYLSQEPP 76 (530)
T ss_pred eEEEeeeEEee-CCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----ceEEEeCCCCC
Confidence 58999999999 5789999999999999999999999999999999999999999999998752 37999999999
Q ss_pred CCcC-CHHHHhcCCCCCCccc------------C------------------CCCHHHHHHHHHHcCChhHHhcCCCCcc
Q 000647 524 TAVG-TLRDQLIYPLTSDQEV------------E------------------PLTHGGMVELLKNVDLEYLLDRYPPEKE 572 (1374)
Q Consensus 524 l~~~-Tv~eni~~~~~~~~~~------------~------------------~~~~~~~~~~l~~~~L~~~~~~~~~~~~ 572 (1374)
.... |+.+.+.-+....... + ...+.++..+|..+++.+. ++
T Consensus 77 ~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~------ 149 (530)
T COG0488 77 LDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DR------ 149 (530)
T ss_pred cCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cC------
Confidence 8865 9999887654211000 0 0011233344444444333 11
Q ss_pred ccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhcCCEEEEEccChhhHh-hccEEEEecC
Q 000647 573 INWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 573 ~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
--.+||||||.|++|||||+.+||+|+|||||++||.++...+-+.|++...|+|+||||..++. -|++|+.++.
T Consensus 150 --~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~ 225 (530)
T COG0488 150 --PVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDR 225 (530)
T ss_pred --chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecC
Confidence 12589999999999999999999999999999999999999999999875449999999999986 6899999985
No 91
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-52 Score=467.36 Aligned_cols=332 Identities=22% Similarity=0.335 Sum_probs=263.2
Q ss_pred HHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHH
Q 000647 294 RTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRA 373 (1374)
Q Consensus 294 r~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~ 373 (1374)
.-|-|+||-|++|+.|.++..+...++.+..++....-.+++..++.++ -++...+.++++ |+ +.....+.|.-
T Consensus 405 llNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii-~lgll~gsll~a--Y~---Vt~q~ltVGDf 478 (790)
T KOG0056|consen 405 LLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGII-GLGLLAGSLLCA--YR---VTEQTLTVGDF 478 (790)
T ss_pred hhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhHHhhhhheee--ee---eeeccccccce
Confidence 3478999999999999865555444444433333322233444444432 122222222222 11 11122344432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEE
Q 000647 374 KMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVV 453 (1374)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~ 453 (1374)
. .+..+++.++.++..+...++.++.-.--+++++++++++++...... ........+.|+|+||+|.
T Consensus 479 V------lf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~------a~pl~~~~G~i~fsnvtF~ 546 (790)
T KOG0056|consen 479 V------LFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPG------APPLKVTQGKIEFSNVTFA 546 (790)
T ss_pred e------hHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCC------CCCccccCCeEEEEEeEEe
Confidence 2 234577888889988988999999888888999999887665431110 0111123678999999999
Q ss_pred cCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcC
Q 000647 454 TPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVG 527 (1374)
Q Consensus 454 ~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~ 527 (1374)
|..++++|+|+||++.||+.+++|||||+||||++|+|.++++.++|.|.+||+| ..+|++||.||||..+|+.
T Consensus 547 Y~p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNd 626 (790)
T KOG0056|consen 547 YDPGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFND 626 (790)
T ss_pred cCCCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecc
Confidence 9889999999999999999999999999999999999999999999999999987 3578999999999999999
Q ss_pred CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000647 528 TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDE 604 (1374)
Q Consensus 528 Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDE 604 (1374)
|+..||.|+.+. .+++++.++.+.+++++-+-.+|.++++ +.|-.||||||||+||||+++++|.|++|||
T Consensus 627 TI~yNIryak~~------AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDE 700 (790)
T KOG0056|consen 627 TILYNIRYAKPS------ASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDE 700 (790)
T ss_pred eeeeheeecCCC------CChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcc
Confidence 999999998654 5788999999999999999999998776 5677999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 605 CTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 605 ptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+|||||..+|+.|...+.+ .++|.|+|+||++++-++|.|+++++
T Consensus 701 ATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~ 747 (790)
T KOG0056|consen 701 ATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISN 747 (790)
T ss_pred hhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeC
Confidence 9999999999999999876 58999999999999999999999986
No 92
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.1e-50 Score=517.29 Aligned_cols=461 Identities=15% Similarity=0.193 Sum_probs=306.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHHHH----hh-
Q 000647 810 ASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTG----MV- 883 (1374)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~~----~~- 883 (1374)
+..++.....++..+++.+...++...+++++++.+ .||+..+. .+..+|+ +|++.+...+...+.. ++
T Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~----g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~ 265 (694)
T TIGR01846 191 FEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPLGYFESRRV----GDTVARV-RELEQIRNFLTGSALTVVLDLLF 265 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCCCCH----HHHHHHh-hhHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555556666667777777777777777764 67664322 3457888 5888776544322211 11
Q ss_pred --HhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcH
Q 000647 884 --KPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGA 961 (1374)
Q Consensus 884 --~~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~ 961 (1374)
..++.++++.|.++++.. ..++++.++...+.+. ..+...+..+..+.........-...+++..++.+.
T Consensus 266 ~~~~~~~l~~~~~~l~li~l----~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~ 337 (694)
T TIGR01846 266 VVVFLAVMFFYSPTLTGVVI----GSLVCYALLSVFVGPI----LRKRVEDKFERSAAATSFLVESVTGIETIKATATEP 337 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCH
Confidence 122334566777766532 1111122111111111 111111211122222222222233568888888766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHHHHHH
Q 000647 962 REKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASVV 1039 (1374)
Q Consensus 962 ~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~a~~~ 1039 (1374)
.+.+.+++.+.+..+......+...+......++. .+...+.++++.. ..+. .+.|.+.. +....
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~~~il~~g~~lv~~g~----it~G~lia----~~~l~ 404 (694)
T TIGR01846 338 QFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQ-----KLTFAILLWFGAHLVIGGA----LSPGQLVA----FNMLA 404 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHhHHHHHHHHHcCC----CCHHHHHH----HHHHH
Confidence 66665555555544433222211111111111111 1111122222221 1121 12233321 22333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCC-ccccccc
Q 000647 1040 SQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQ 1118 (1374)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~ 1118 (1374)
...+..+..+......+.+...+.+|+.++.+.+++... .. ....+ ...|.|+|+||+|.||+ .+++|+|
T Consensus 405 ~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~-----~~--~~~~~--~~~~~i~~~~vsf~y~~~~~~il~~ 475 (694)
T TIGR01846 405 GRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRS-----AG--LAALP--ELRGAITFENIRFRYAPDSPEVLSN 475 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccC-----CC--CCCCC--CCCCeEEEEEEEEEcCCCCcccccc
Confidence 445566667777778888889999999998754321110 00 00111 13578999999999975 5789999
Q ss_pred ceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCC
Q 000647 1119 LTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPL 1196 (1374)
Q Consensus 1119 ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~ 1196 (1374)
+||+|+|||+++|||+||||||||+++|.|+|+|.+|+|.+||+|++++ +.+|++|++|||||++|+|||||||.++.
T Consensus 476 i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~ 555 (694)
T TIGR01846 476 LNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCN 555 (694)
T ss_pred ceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999988 46788999999999999999999998753
Q ss_pred ChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHh
Q 000647 1197 SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQL 1275 (1374)
Q Consensus 1197 ~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~ 1275 (1374)
+ +..+++++++++.+++.++++++|+||||.+ +.|.+||||||||+|+
T Consensus 556 ~----------------------~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~l--------- 604 (694)
T TIGR01846 556 P----------------------GAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAI--------- 604 (694)
T ss_pred C----------------------CCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHH---------
Confidence 2 2356778899999999999999999999997 4689999999999999
Q ss_pred hhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhh
Q 000647 1276 CSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPF 1353 (1374)
Q Consensus 1276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~ 1353 (1374)
|||++++|+|+|||||||+||.++|+.+.+.+++ .++|+|+||||+++++.
T Consensus 605 ---------------------------ARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~ 657 (694)
T TIGR01846 605 ---------------------------ARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRA 657 (694)
T ss_pred ---------------------------HHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHh
Confidence 9999999999999999999999999988876654 58999999999999999
Q ss_pred ccceEEEEcC
Q 000647 1354 HSLELRLIDG 1363 (1374)
Q Consensus 1354 ~~~~l~l~~g 1363 (1374)
.|+++.+.+|
T Consensus 658 ~d~ii~l~~G 667 (694)
T TIGR01846 658 CDRIIVLEKG 667 (694)
T ss_pred CCEEEEEeCC
Confidence 9999999554
No 93
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.8e-50 Score=543.28 Aligned_cols=190 Identities=18% Similarity=0.227 Sum_probs=150.0
Q ss_pred CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCC---ccEEEeCCCCc---cccccEEEEecCCCCCc-CCH
Q 000647 457 GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV---SGHIAKPGVGS---DLNKEIFYVPQRPYTAV-GTL 529 (1374)
Q Consensus 457 ~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~---~G~I~~~g~~~---~~~~~i~~v~Q~p~l~~-~Tv 529 (1374)
++.+|+|+|+.+++||.++|+||||||||||+|+|+|+.+|+ +|+|.++|.+. ..++.++||+|++.++. .||
T Consensus 177 ~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV 256 (1470)
T PLN03140 177 KLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTV 256 (1470)
T ss_pred cceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcH
Confidence 356999999999999999999999999999999999999998 99999999651 23578999999986654 699
Q ss_pred HHHhcCCCCCCc---------c---cCC----CCHH------------------HHHHHHHHcCChhHHhcCCCCccccC
Q 000647 530 RDQLIYPLTSDQ---------E---VEP----LTHG------------------GMVELLKNVDLEYLLDRYPPEKEINW 575 (1374)
Q Consensus 530 ~eni~~~~~~~~---------~---~~~----~~~~------------------~~~~~l~~~~L~~~~~~~~~~~~~~~ 575 (1374)
+||+.|+..... + .+. ..+. ..+++++.+||++..+....+ ..
T Consensus 257 ~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~---~~ 333 (1470)
T PLN03140 257 KETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGD---EM 333 (1470)
T ss_pred HHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCC---cc
Confidence 999987532110 0 000 0001 134577888887654432111 11
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccCh--hhHhhccEEEEecC
Q 000647 576 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRP--ALVAFHDVVLSLDG 649 (1374)
Q Consensus 576 g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~--~~~~~~d~il~l~~ 649 (1374)
...||||||||++|||+++.+|++++|||||+|||+.+...+.+.+++ .|+|+|+++|++ +....+|+|++|++
T Consensus 334 ~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~ 413 (1470)
T PLN03140 334 IRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE 413 (1470)
T ss_pred ccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC
Confidence 257999999999999999999999999999999999999999988764 488999999986 45578999999975
No 94
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-49 Score=467.64 Aligned_cols=471 Identities=20% Similarity=0.256 Sum_probs=301.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHH----H
Q 000647 801 IGVSVLQSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTD----L 875 (1374)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~----l 875 (1374)
++..++..+.-.++......+..+++...+..|++.++++..+.. .|-+-. ......+.+++-++.+..- +
T Consensus 43 ~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~----~~g~~atl~~egve~l~~Y~~ryL 118 (559)
T COG4988 43 LILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQK----PAGSAATLALEGIEQLEPYYARYL 118 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCC----CcchHHHHHHHHHHHHHHHHHHHH
Confidence 333344444455556666667777777788888888888776643 332211 1122345566666665433 4
Q ss_pred HHHHHHhhHhH---HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHH
Q 000647 876 SGLVTGMVKPS---VDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAE 952 (1374)
Q Consensus 876 ~~~~~~~~~~~---~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~ae 952 (1374)
+.++.+++.|+ +.++|+.|.-+++... ..++++.++++.....+.. ..+--+...++.+ ..+++++ ..+
T Consensus 119 Pq~~~~~ivp~~i~i~v~~~~w~aalIlli-t~PlIPlfMilvg~~a~~~---s~~~~~~~~~ls~---~FLD~Lr-GL~ 190 (559)
T COG4988 119 PQMFLSAIVPLLILIAIFFFNWAAALILLI-TAPLIPLFMILVGLAAKDA---SEKQFSALARLSG---HFLDRLR-GLE 190 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHhHH---HHHHHHHHHHHHH---HHHHHhc-ChH
Confidence 55555555554 4457889987776421 1222333332211111110 0000111122222 2345554 358
Q ss_pred HhhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHH-Hhhhcc--cchhhhhhhHHH
Q 000647 953 SVAFFGGGAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLY-AMEHKG--DRALVSTQGELA 1029 (1374)
Q Consensus 953 sIa~~~g~~~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~-~~~~~~--~~~~~~~~~~~~ 1029 (1374)
++.+|+....+.+.+.+.-.+.-+.....++-.++.....+|++. ...++..+| +..+.+ +.. ++
T Consensus 191 TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~-----lsiAlvAv~~g~~ll~~G~lt-------l~ 258 (559)
T COG4988 191 TLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAY-----LSIALVAVYIGFRLLGEGDLT-------LF 258 (559)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHccCCcc-------HH
Confidence 888888654443333221111111111222333333333333321 112222222 222222 111 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCC-CCCCCCCCCCCCCEEEeeeEEe
Q 000647 1030 HALRFLASVVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGS-SQHKWNSTDYQDSISFSKLDII 1108 (1374)
Q Consensus 1030 ~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~-~~~~w~~~~~~g~I~f~~V~~~ 1108 (1374)
.++. +....-..|...-++-..+..-..-.++.+.++.+.+.+....+ .+. ....|.. +.+|.++|++|.
T Consensus 259 ~~l~-~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~-----~~~~~~~~~~~---~~ei~~~~l~~~ 329 (559)
T COG4988 259 AGLF-VLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPG-----SGEKAEVANEP---PIEISLENLSFR 329 (559)
T ss_pred HHHH-HHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCC-----CccccccccCC---CceeeecceEEe
Confidence 1111 11111223344444444444444446778888888754322111 111 0112211 345666699999
Q ss_pred CCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCc
Q 000647 1109 TPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLG 1186 (1374)
Q Consensus 1109 yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~G 1186 (1374)
||+++++++|+||+++|||+++|||+||||||||+++|.||.+|.+|+|.++|+|++++ ..+|+++++|||+||+|.|
T Consensus 330 y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~g 409 (559)
T COG4988 330 YPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAG 409 (559)
T ss_pred cCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999 4788999999999999999
Q ss_pred chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhc
Q 000647 1187 TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLG 1265 (1374)
Q Consensus 1187 TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrla 1265 (1374)
||||||.++.+ +.+|++++++++.++|.++++. |+|+||.+ +.|..|||||+||++
T Consensus 410 TireNi~l~~~----------------------~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRla 466 (559)
T COG4988 410 TIRENILLARP----------------------DASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLA 466 (559)
T ss_pred cHHHHhhccCC----------------------cCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHH
Confidence 99999986543 2467889999999999999999 99999997 578999999999999
Q ss_pred cccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEE
Q 000647 1266 MVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVT 1343 (1374)
Q Consensus 1266 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~ 1343 (1374)
+ ||||++++.++|||||||+||.++|+.+.+.+.+ .++|||+
T Consensus 467 L------------------------------------ARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~ 510 (559)
T COG4988 467 L------------------------------------ARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLV 510 (559)
T ss_pred H------------------------------------HHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEE
Confidence 9 9999999999999999999999999887765543 5899999
Q ss_pred ecCCCCchhhccceEEEEcC
Q 000647 1344 SSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1344 IaHRl~~i~~~~~~l~l~~g 1363 (1374)
||||+..+.-.|+++++.+|
T Consensus 511 itHrl~~~~~~D~I~vld~G 530 (559)
T COG4988 511 ITHRLEDAADADRIVVLDNG 530 (559)
T ss_pred EEcChHHHhcCCEEEEecCC
Confidence 99999999999999999443
No 95
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1e-49 Score=501.99 Aligned_cols=460 Identities=16% Similarity=0.192 Sum_probs=295.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHH----HHHHHhhHh
Q 000647 811 SSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLS----GLVTGMVKP 885 (1374)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~----~~~~~~~~~ 885 (1374)
..++.+..+++..+.+.+...+++..+++++++.+ .||+..+ ..+..+|++.|++.+..... .++..++..
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~----~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~ 124 (569)
T PRK10789 49 VYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHR----TGDLMARATNDVDRVVFAAGEGVLTLVDSLVMG 124 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCC----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444555556666677777777888777764 5665322 24568999999998763322 222222221
Q ss_pred ---HHHH-HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCCcH
Q 000647 886 ---SVDI-LWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGGGA 961 (1374)
Q Consensus 886 ---~~~~-~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g~~ 961 (1374)
++.+ +++.|.++++.. ..+++++++...+.+. ..+...+.++..+.+.......-.+.+++..|+.+.
T Consensus 125 ~~~~~~~~~~~~~~l~li~l----~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~ 196 (569)
T PRK10789 125 CAVLIVMSTQISWQLTLLAL----LPMPVMAIMIKRYGDQ----LHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLED 196 (569)
T ss_pred HHHHHHHHHHHhHHHHHHHH----HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccH
Confidence 1122 246777665531 1111111111111111 111111111111112111112223457777887655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhhh--cccchhhhhhhHHHHHHHHHHHHH
Q 000647 962 REKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEH--KGDRALVSTQGELAHALRFLASVV 1039 (1374)
Q Consensus 962 ~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~~~~~~~~~~~~~~a~~~~a~~~ 1039 (1374)
.+.+.+++...+..+..... .+..+....+.. ....+...+.++++... .+. .+.|.+.... .+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~l~~g~~lv~~g~----lt~g~l~a~~----~~~ 263 (569)
T PRK10789 197 RQSALFAADAEDTGKKNMRV---ARIDARFDPTIY--IAIGMANLLAIGGGSWMVVNGS----LTLGQLTSFV----MYL 263 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHcCC----cCHHHHHHHH----HHH
Confidence 55544444333333222111 111111111100 00111111122222111 111 1223322221 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCC-ccccccc
Q 000647 1040 SQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQ 1118 (1374)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~ 1118 (1374)
.+....+..+......+.....+.+|+.++.+..++.++ .. ...+ ...+.|+|+||+|.||. .+++|+|
T Consensus 264 ~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~------~~--~~~~--~~~~~I~~~~v~~~y~~~~~~~l~~ 333 (569)
T PRK10789 264 GLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKD------GS--EPVP--EGRGELDVNIRQFTYPQTDHPALEN 333 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccC------CC--CCCC--CCCCcEEEEEEEEECCCCCCccccC
Confidence 233344455566667777888899999998754211110 00 0011 12568999999999986 4689999
Q ss_pred ceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCC
Q 000647 1119 LTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPL 1196 (1374)
Q Consensus 1119 ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~ 1196 (1374)
+||+|+|||+++||||||||||||+++|.|+|+|.+|+|.+||.|++++ ..+|+++++|||+|++|+||+||||.++.
T Consensus 334 i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~ 413 (569)
T PRK10789 334 VNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGR 413 (569)
T ss_pred eeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999887 46788999999999999999999998763
Q ss_pred ChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHh
Q 000647 1197 SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQL 1275 (1374)
Q Consensus 1197 ~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~ 1275 (1374)
+ +..|++++++++.+++++++.++|+|+||.+ ++|.+||||||||+||
T Consensus 414 ~----------------------~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~l--------- 462 (569)
T PRK10789 414 P----------------------DATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISI--------- 462 (569)
T ss_pred C----------------------CCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHH---------
Confidence 2 1346678888999999999999999999997 4788999999999999
Q ss_pred hhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhh
Q 000647 1276 CSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPF 1353 (1374)
Q Consensus 1276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~ 1353 (1374)
|||++++|+|+|||||||+||.++++.+.+.+++ .++|+|+||||+++++.
T Consensus 463 ---------------------------ARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~ 515 (569)
T PRK10789 463 ---------------------------ARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTE 515 (569)
T ss_pred ---------------------------HHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHc
Confidence 9999999999999999999999999988876654 58999999999999999
Q ss_pred ccceEEEEcC
Q 000647 1354 HSLELRLIDG 1363 (1374)
Q Consensus 1354 ~~~~l~l~~g 1363 (1374)
.|+++.+.+|
T Consensus 516 ~d~i~~l~~G 525 (569)
T PRK10789 516 ASEILVMQHG 525 (569)
T ss_pred CCEEEEEeCC
Confidence 9999999654
No 96
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=6.6e-49 Score=495.41 Aligned_cols=457 Identities=16% Similarity=0.193 Sum_probs=298.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cceeeecCCCCCCCCccchHHHHHHHHHHHHHHHHHh----hH---hHH
Q 000647 816 PSIRHLTARLALGWRIRMTQHLLKSYLRKN-SFYKVFNMSSKSIDADQRITHDLEKLTTDLSGLVTGM----VK---PSV 887 (1374)
Q Consensus 816 ~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~-~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~~~~~~----~~---~~~ 887 (1374)
+....+..++..+.+.++...+++++++.+ .||+..+ ..+..+|++.|++.+...+...+..+ +. .++
T Consensus 74 ~~~~~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~~----~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~ 149 (585)
T TIGR01192 74 VLVAREADRLAHGRRATLLTEAFGRIISMPLSWHQQRG----TSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIP 149 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCC----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445556666677777778888888764 6776432 24568899999988765443333222 21 123
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhh-hHHHHHHHHhHHHhhhcCCcHHHHHH
Q 000647 888 DILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTF-RFMHERLRAHAESVAFFGGGAREKAM 966 (1374)
Q Consensus 888 ~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~-r~~~~~l~~~aesIa~~~g~~~e~~~ 966 (1374)
.+++..|.++++.. .+++++.++...+.+ ...+......+..+.+ ....|.+ .+.+++..|+.+..+.+.
T Consensus 150 ~l~~~~~~l~li~l----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~l-~gi~~ik~~~~~~~~~~~ 220 (585)
T TIGR01192 150 TAFAMDWRLSIVLM----VLGILYILIAKLVMQ----RTKNGQAAVEHHYHNVFKHVSDSI-SNVSVVHSYNRIEAETSA 220 (585)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHhcccHHHHHH
Confidence 34456777766542 111122221111111 1111111111111111 1222222 356788888876666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHHHHHHHHHHH
Q 000647 967 IESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLASVVSQSFL 1044 (1374)
Q Consensus 967 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~a~~~~~~~~ 1044 (1374)
+++..++..+......+...+...+..++ ..+...+.++++.. ..+.. +.|.+.... ......+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~g~~~v~~g~i----t~g~l~a~~----~~~~~l~~ 287 (585)
T TIGR01192 221 LKQFTNNLLSAQYPVLDWWALASGLNRMA-----STISMMCILVIGTVLVIKGEL----SVGEVIAFI----GFANLLIG 287 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHcCCC----CHHHHHHHH----HHHHHHHH
Confidence 55555444433222222111111111111 11111111222211 11111 223322211 22233444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCcccccccceEEEe
Q 000647 1045 AFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIV 1124 (1374)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~ls~~I~ 1124 (1374)
.+..+......+.+...+++|+.++.+..++.++ .. .+..++ ...+.|+|+||+|.||+.+++|+|+||+|+
T Consensus 288 ~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~-----~~-~~~~~~--~~~~~i~~~~v~~~y~~~~~~l~~i~~~i~ 359 (585)
T TIGR01192 288 RLDQMSGFITQIFEARAKLEDFFDLEDSVFQREE-----PA-DAPELP--NVKGAVEFRHITFEFANSSQGVFDVSFEAK 359 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC-----Cc-cCCCCC--CCCCeEEEEEEEEECCCCCccccceeEEEc
Confidence 5555556666667777888898887653211100 00 011111 125679999999999876789999999999
Q ss_pred CCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCChhHHH
Q 000647 1125 PGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAE 1202 (1374)
Q Consensus 1125 ~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~ 1202 (1374)
+||+++||||||||||||+++|.|+|+|.+|+|.+||.|++++ +.+|+.+++|||||++|+||+||||.++.+
T Consensus 360 ~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~----- 434 (585)
T TIGR01192 360 AGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGRE----- 434 (585)
T ss_pred CCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCC-----
Confidence 9999999999999999999999999999999999999999887 357888999999999999999999987632
Q ss_pred HHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhhhcccc
Q 000647 1203 LRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLCSINKI 1281 (1374)
Q Consensus 1203 ~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~ 1281 (1374)
+..|++++++++.+++.+++.++|+|+||.+ +++..|||||||||+|
T Consensus 435 -----------------~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~l--------------- 482 (585)
T TIGR01192 435 -----------------GATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAI--------------- 482 (585)
T ss_pred -----------------CCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHH---------------
Confidence 1246667888888999999999999999987 4788999999999999
Q ss_pred cchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEE
Q 000647 1282 SELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELR 1359 (1374)
Q Consensus 1282 ~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~~~~l~ 1359 (1374)
||||+++|+++|||||||+||.++++.+++.+++ .++|+|+||||+++++.+|+++.
T Consensus 483 ---------------------ARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~ 541 (585)
T TIGR01192 483 ---------------------ARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLF 541 (585)
T ss_pred ---------------------HHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEE
Confidence 9999999999999999999999999998876654 58999999999999999999999
Q ss_pred EEcCC
Q 000647 1360 LIDGE 1364 (1374)
Q Consensus 1360 l~~g~ 1364 (1374)
|.+|+
T Consensus 542 l~~G~ 546 (585)
T TIGR01192 542 LDQGR 546 (585)
T ss_pred EECCE
Confidence 96653
No 97
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.3e-48 Score=490.08 Aligned_cols=460 Identities=19% Similarity=0.210 Sum_probs=298.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeecCCCCCCCCccchHHHHHHHHHHHHH-HHHHhh--
Q 000647 807 QSAASSFIAPSIRHLTARLALGWRIRMTQHLLKSYLRKNSFYKVFNMSSKSIDADQRITHDLEKLTTDLSG-LVTGMV-- 883 (1374)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~lr~~~f~~~~~~~~~~~d~~~ri~~D~~~l~~~l~~-~~~~~~-- 883 (1374)
..++..++.....++..+++.++..++..+++++.++.+. . .. .+...+++.|++.+...+.. ....++
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~--~---~~---~~~~~~~~~d~~~i~~~~~~~~~~~~~~~ 126 (544)
T TIGR01842 55 LYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFSATL--R---RG---KIDGLQALRDLDQLRQFLTGPGLFAFFDA 126 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc--c---Cc---cchHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 3334445555555666667777777777777777776542 1 11 12367888999887654433 111111
Q ss_pred ----HhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCccccccHHHHhhhhhhhHHHHHHHHhHHHhhhcCC
Q 000647 884 ----KPSVDILWFTWRMKALTGQRGVAILYAYMLLGLGFLRSVTPEFGDLTSREQQLEGTFRFMHERLRAHAESVAFFGG 959 (1374)
Q Consensus 884 ----~~~~~~~~~~w~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~r~~~~~l~~~aesIa~~~g 959 (1374)
..++.++++.|.++.+.. ..+++++++...+.+. ..+...+..+..+.........-.+.+++..|+.
T Consensus 127 ~~~~~~~~~l~~~~~~l~li~l----~~~~l~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~ 198 (544)
T TIGR01842 127 PWMPIYLLVCFLLHPWIGILAL----GGAVVLVGLALLNNRA----TKKPLKEATEASIRANNLADSALRNAEVIEAMGM 198 (544)
T ss_pred HHHHHHHHHHHHHhhHHHHHHH----HHHHHHHHHHHHhhHH----HHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCc
Confidence 112334556777665531 1111111111111111 1111111122222222222222345678888886
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhhHHHHHHHHHHHhh--hcccchhhhhhhHHHHHHHHHHH
Q 000647 960 GAREKAMIESRFRELLEHSLLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAME--HKGDRALVSTQGELAHALRFLAS 1037 (1374)
Q Consensus 960 ~~~e~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~~a~~~~a~ 1037 (1374)
+..+.+.+++.+++..+......+..-.......++. .+...+.++++.. ..+. .+.|.+...+ .
T Consensus 199 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~l~~~g~----it~g~l~a~~----~ 265 (544)
T TIGR01842 199 MGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFR-----IVLQSLVLGLGAYLAIDGE----ITPGMMIAGS----I 265 (544)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCC----CCHHHHHHHH----H
Confidence 6665555555555444333222111111111110110 0111111222211 1111 1233332222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCC-ccccc
Q 000647 1038 VVSQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLA 1116 (1374)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL 1116 (1374)
+..+.+..+..+......+.+...+.+|+.++.+..++..+ . ...+ ...+.|+|+||+|.||+ .+++|
T Consensus 266 ~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~-----~----~~~~--~~~~~i~~~~v~~~y~~~~~~~l 334 (544)
T TIGR01842 266 LVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP-----A----MPLP--EPEGHLSVENVTIVPPGGKKPTL 334 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC-----C----CCCC--CCCCeEEEEEEEEEcCCCCcccc
Confidence 33345556667777777888888999999998754321110 0 0111 12468999999999986 46899
Q ss_pred ccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhcc
Q 000647 1117 RQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIY 1194 (1374)
Q Consensus 1117 ~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~y 1194 (1374)
+|+||+|+|||+++||||||||||||+++|.|+|+|.+|+|.+||.|++++ +.+|+++++|||||++|+||+||||.+
T Consensus 335 ~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~ 414 (544)
T TIGR01842 335 RGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIAR 414 (544)
T ss_pred ccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhc
Confidence 999999999999999999999999999999999999999999999999887 467889999999999999999999975
Q ss_pred CCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhH
Q 000647 1195 PLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLI 1273 (1374)
Q Consensus 1195 p~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~ 1273 (1374)
+.+ +..+++++++++.++++++++++|+|+||.+ ++|.+||||||||+|+
T Consensus 415 ~~~----------------------~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~l------- 465 (544)
T TIGR01842 415 FGE----------------------NADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIAL------- 465 (544)
T ss_pred cCC----------------------CCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHH-------
Confidence 421 1346678888999999999999999999997 4689999999999999
Q ss_pred HhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh---cCceEEEecCCCCc
Q 000647 1274 QLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD---MGITFVTSSQRPAL 1350 (1374)
Q Consensus 1274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~---~~~TvI~IaHRl~~ 1350 (1374)
|||++++|+++|||||||+||.++++.+.+.+++ .++|+|+||||+++
T Consensus 466 -----------------------------ARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~ 516 (544)
T TIGR01842 466 -----------------------------ARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSL 516 (544)
T ss_pred -----------------------------HHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHH
Confidence 9999999999999999999999999988876653 47999999999999
Q ss_pred hhhccceEEEEcCC
Q 000647 1351 IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1351 i~~~~~~l~l~~g~ 1364 (1374)
++..|+++.|.+|+
T Consensus 517 ~~~~d~i~~l~~G~ 530 (544)
T TIGR01842 517 LGCVDKILVLQDGR 530 (544)
T ss_pred HHhCCEEEEEECCE
Confidence 99999999996543
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-47 Score=481.23 Aligned_cols=497 Identities=15% Similarity=0.158 Sum_probs=322.9
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 107 LLALVGIVVLRTALSNRL-AKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHT 185 (1374)
Q Consensus 107 l~~~~~l~~~~t~ls~~~-~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~ 185 (1374)
++..+++.++...+.+.+ +.+.+.++|.+.. +...+ ..+.+++++..++. |+...+.......+..+++.
T Consensus 15 ~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~-~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~lR~ 85 (547)
T PRK10522 15 FISVMALSLASAALGIGLIAFINQRLIETADT-SLLVL----PEFLGLLLLLMAVT----LGSQLALTTLGHHFVYRLRS 85 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cchHH----HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 444555566666666664 5666777776532 21111 11222222222223 33444444444457778888
Q ss_pred HHhhccccccccccCC-CCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 000647 186 RYFENMAYYKISHVDG-RITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTM 264 (1374)
Q Consensus 186 ~yl~~~~~y~~~~~d~-~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i 264 (1374)
+++++....+..++++ ..++..+|+++|++.+...+.. +..++..++..+.+.+ ++.+++|.+++++++..++..++
T Consensus 86 ~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~-l~~~~~~~~~~i~~~~-~l~~~~~~l~li~l~~~~~~~~i 163 (547)
T PRK10522 86 EFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVR-LPELVQGIILTLGSAA-YLAWLSPKMLLVTAIWMAVTIWG 163 (547)
T ss_pred HHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHH
Confidence 8889888888877765 4679999999999988765443 3334444443333333 23456887777766655555555
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 000647 265 MRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVV-LHDHWWFGMIQDFLLK 343 (1374)
Q Consensus 265 ~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~ 343 (1374)
..++.++..+...+.++..+++........++.++++ ++++..+ +.+.++|++..+..++. .+..........+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (547)
T PRK10522 164 GFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAE-YVFENEYEPDAQEYRHHIIRADTFHLSAVNWSNI 241 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHH-HHHHHHHhHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 5566777766666666666776666666666777775 4444322 12233444433332221 1111111111111000
Q ss_pred HHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 000647 344 YLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISREL 423 (1374)
Q Consensus 344 ~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~ 423 (1374)
.....++.++ ++.+... ..+.+...++. ..+.....++..+......+.....+.+|+.++++.+++.
T Consensus 242 ~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~------~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~ 309 (547)
T PRK10522 242 MMLGAIGLVF----YMANSLG--WADTNVAATYS------LTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKA 309 (547)
T ss_pred HHHHHHHHHH----HHHHHhh--cCChHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 0000111111 1222211 11122111111 1122234567777777888899999999999986533221
Q ss_pred cccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEE
Q 000647 424 SIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIA 503 (1374)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~ 503 (1374)
+... . ...+..+.++++||+|.||+++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.
T Consensus 310 ~~~~------~--~~~~~~~~i~~~~v~f~y~~~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~ 381 (547)
T PRK10522 310 EFPR------P--QAFPDWQTLELRNVTFAYQDNGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEIL 381 (547)
T ss_pred cccc------c--cccCcCceEEEEEEEEEeCCCCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEE
Confidence 1000 0 0011124699999999998767899999999999999999999999999999999999999999999
Q ss_pred eCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCC
Q 000647 504 KPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGD 577 (1374)
Q Consensus 504 ~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~ 577 (1374)
++|.+ .+++++++||||+|++|++|+++| +. ..+++++.++++.+++++..+. +.+. ..|.
T Consensus 382 ~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~-------~~~~~~~~~~~~~~~l~~~~~~-~~~~--~~G~ 448 (547)
T PRK10522 382 LDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GK-------PANPALVEKWLERLKMAHKLEL-EDGR--ISNL 448 (547)
T ss_pred ECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cC-------chHHHHHHHHHHHcCCchhhhc-cccC--CCCC
Confidence 99975 246789999999999999999998 11 2456778889999999876653 2211 1267
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 578 ELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 578 ~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+||||||||++||||++++|+++|||||||+||+++++.+++.+.+ .++|+|+||||++.++.+|+|+++++
T Consensus 449 ~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 524 (547)
T PRK10522 449 KLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRN 524 (547)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEEC
Confidence 8999999999999999999999999999999999999999887642 48999999999999999999999986
No 99
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.1e-47 Score=520.91 Aligned_cols=461 Identities=17% Similarity=0.214 Sum_probs=314.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCC-CCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGR-ITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLC 243 (1374)
Q Consensus 165 ~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~-~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 243 (1374)
.++...+..+.-.+..+++|.+.+++...-+++|++.. .+...+|+++|++.+.+.+...+..++..++..+.+.+. +
T Consensus 942 ~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~-i 1020 (1490)
T TIGR01271 942 GFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFV-V 1020 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 33444444444456888899999999999999988764 568899999999999888877766666555544433322 2
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 000647 244 SYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRH 323 (1374)
Q Consensus 244 ~~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~ 323 (1374)
.+.+|.+++.++..+++...+..+..+....+........+...........+.++|+.|+.|+.+.+++.+..+...+.
T Consensus 1021 ~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~ 1100 (1490)
T TIGR01271 1021 SVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTAN 1100 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 34455433322221111111111122221112111112222233344445557899999999999987777776654443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 324 MRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRL 403 (1374)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 403 (1374)
+........|++....++...+...+.+ +. +.... .+.+.+|.. + .+...+...+..+......+
T Consensus 1101 ~~~~~~~~~wl~~~~~~i~~~~~~~~~~-l~---~~~~~--~~~g~~g~~--l-------~~~~~l~~~l~~l~~~~~~l 1165 (1490)
T TIGR01271 1101 WFLYLSTLRWFQMRIDIIFVFFFIAVTF-IA---IGTNQ--DGEGEVGII--L-------TLAMNILSTLQWAVNSSIDV 1165 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH---HHHhc--CCccHHHHH--H-------HHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444333321111111111 11 11111 111223221 1 12223334455555666778
Q ss_pred HHHHHHHHHHHHHHhhcccccccCCCC-----------CCCCCCCccCCCCcEEEeeeEEEcCC-CCeeeeeeeEEEeCC
Q 000647 404 NRLSGYADRIHELMVISRELSIEDKSP-----------QRNGSRNYFSEANYIEFSGVKVVTPT-GNVLVENLTLKVEPG 471 (1374)
Q Consensus 404 ~~~~~~~~Ri~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~l~~isl~i~~G 471 (1374)
.....+++|+.++.+.+++........ ........++..+.|+|+||++.|++ .+++|+|+||+|++|
T Consensus 1166 e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~G 1245 (1490)
T TIGR01271 1166 DGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGG 1245 (1490)
T ss_pred HHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCC
Confidence 888889999999987654432110000 00000112344568999999999975 478999999999999
Q ss_pred CEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCC
Q 000647 472 SNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEP 545 (1374)
Q Consensus 472 e~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~ 545 (1374)
|+++|+|+||||||||+++|+|+++ .+|+|.+||.+ .++|++|+||||+|++|+||||+||.... .
T Consensus 1246 ekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-------~ 1317 (1490)
T TIGR01271 1246 QRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-------Q 1317 (1490)
T ss_pred CEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-------C
Confidence 9999999999999999999999997 79999999976 35788999999999999999999995421 3
Q ss_pred CCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHH
Q 000647 546 LTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVR 622 (1374)
Q Consensus 546 ~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~ 622 (1374)
.+|++++++|+.++|.+++.++|.+.++ +.|.+||||||||++|||||+++|+|||||||||+||.++++.|++.++
T Consensus 1318 ~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~ 1397 (1490)
T TIGR01271 1318 WSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLK 1397 (1490)
T ss_pred CCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 5789999999999999999999876554 4577899999999999999999999999999999999999999999998
Q ss_pred h--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 623 A--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 623 ~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+ .++|+|+||||++.+..+|+|++|++
T Consensus 1398 ~~~~~~TvI~IaHRl~ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1398 QSFSNCTVILSEHRVEALLECQQFLVIEG 1426 (1490)
T ss_pred HHcCCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 6 48999999999999999999999986
No 100
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-49 Score=445.65 Aligned_cols=247 Identities=22% Similarity=0.318 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCcccccccceEEEeCCCeEEE
Q 000647 1052 LHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLV 1131 (1374)
Q Consensus 1052 ~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~I 1131 (1374)
.++++-+...-+++.+++.+...+... ....++-|| ...|.|.|+||+|.|...+++|+|+||+|++|++++|
T Consensus 222 ~Yrei~q~ltdme~mfdLl~~~~~v~d-----~pda~~L~~--~~~g~v~F~~V~F~y~~~r~iL~~isf~i~~g~tvAi 294 (497)
T COG5265 222 SYREIRQALTDMEKMFDLLDVEAEVSD-----APDAPPLWP--VRLGAVAFINVSFAYDPRRPILNGISFTIPLGKTVAI 294 (497)
T ss_pred HHHHHHHhhhhHHHHHHhhccchhhcc-----CCCCccccc--cccceEEEEEEEeeccccchhhcCccccccCccEEEE
Confidence 344444444556666666554322211 111234454 2368999999999998889999999999999999999
Q ss_pred EcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhc
Q 000647 1132 TGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLH 1209 (1374)
Q Consensus 1132 vG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~ 1209 (1374)
||+||+||||+.++|+||||+.+|+|++||+||+++ +.+|+.|++||||.+||+.|+..||.|+.+
T Consensus 295 Vg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~------------ 362 (497)
T COG5265 295 VGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRP------------ 362 (497)
T ss_pred EeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCc------------
Confidence 999999999999999999999999999999999998 678999999999999999999999999854
Q ss_pred cCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhhhcccccchhhhH
Q 000647 1210 GKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLI 1288 (1374)
Q Consensus 1210 ~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~ 1288 (1374)
...+++++.+.+..+++++++.+|+||||.+ ++|-.||||||||+||
T Consensus 363 ----------~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrvai---------------------- 410 (497)
T COG5265 363 ----------DATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAI---------------------- 410 (497)
T ss_pred ----------cccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHHHH----------------------
Confidence 1345567777788888889999999999998 5888999999999999
Q ss_pred hhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1289 YCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1289 ~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
||++|++|+||+|||||||||..+|+++|+.+++ .|+|.++||||++||-..|.+++|.+|
T Consensus 411 --------------ar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g 473 (497)
T COG5265 411 --------------ARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNG 473 (497)
T ss_pred --------------HHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCC
Confidence 9999999999999999999999999999987764 699999999999999999999999765
No 101
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.2e-46 Score=431.46 Aligned_cols=502 Identities=19% Similarity=0.216 Sum_probs=323.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 109 ALVGIVVLRTALSNRLAKVQGFLFRAA-FLRRVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTRY 187 (1374)
Q Consensus 109 ~~~~l~~~~t~ls~~~~~~~~~~~~al-~~~~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~~y 187 (1374)
.+.+++.+-..+.+..|..-=+.||-. -.++.+....+ .++++...++..+..+++.++-++.-.++...+..+.
T Consensus 27 ~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~L----tvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v 102 (580)
T COG4618 27 GVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVML----TVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPV 102 (580)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 334444445556666677667777754 46677764443 2233333344555666666666666566666665555
Q ss_pred hhccccccccccCCCCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH
Q 000647 188 FENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYT--WRLCSYASPKYVFWILAYVLGAGTMM 265 (1374)
Q Consensus 188 l~~~~~y~~~~~d~~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~--~~l~~~~~~~l~~~~l~~~~~~~~i~ 265 (1374)
|.....-+.. .+..-..-..-.|.+++...+..- -+.+++|.-++- ..+++.+.|.+.++.++.+++... +
T Consensus 103 ~~a~~~~~l~---~~~~g~~~Q~LrDL~qvR~Fltg~---g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~-l 175 (580)
T COG4618 103 FAASFSAPLL---RRGSGDGLQPLRDLDQVRQFLTGT---GLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVV-L 175 (580)
T ss_pred HHHHHhhHHh---hcCCCccccchhhHHHHHHHHcCC---CcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 5443211111 111111233456887765554431 222333322210 011112344443333322221111 1
Q ss_pred HHHhHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 266 RNFSPAFGKL-MSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKY 344 (1374)
Q Consensus 266 ~~~~~~l~~l-~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1374)
.++.-.+.+. ..+..+......+.....+.|+|.|++.+....-.++|.+..........+.-.....++.....+-..
T Consensus 176 a~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~ 255 (580)
T COG4618 176 ALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMA 255 (580)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 1222111111 111222222233445556669999999999999999998887776665544322222222222222111
Q ss_pred HHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 000647 345 LGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVII-SLFQSLGTLSISSRRLNRLSGYADRIHELMVISREL 423 (1374)
Q Consensus 345 ~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~ 423 (1374)
+.+ .++....|.. ..+..|.|. +++ .+++. -...++-..+..++.+.....+.+|+.+++...+..
T Consensus 256 lQs---~iLg~GA~Lv---i~ge~t~G~--mIA-----~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~ 322 (580)
T COG4618 256 LQS---AVLGLGAWLV---IKGEITPGM--MIA-----GSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAA 322 (580)
T ss_pred HHH---HHHhcceeeE---EcCcCCcch--hhH-----HHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 111 1111111110 112234442 221 11111 233455556677888888888999999998765543
Q ss_pred cccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEE
Q 000647 424 SIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHI 502 (1374)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I 502 (1374)
.. .. ..+..++.+.++++++..|+. +++++++||++++||.++|+||||||||||.|+|.|.|+|.+|.|
T Consensus 323 ~~---~m------~LP~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~V 393 (580)
T COG4618 323 AE---RM------PLPAPQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSV 393 (580)
T ss_pred cC---CC------CCCCCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcE
Confidence 21 00 011125689999999988764 689999999999999999999999999999999999999999999
Q ss_pred EeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCcccc--
Q 000647 503 AKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEIN-- 574 (1374)
Q Consensus 503 ~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~-- 574 (1374)
.+||.+ +++.++|||+||+--+|.|||.|||.-... +.+++++.++.+..+.++++-++|.++++.
T Consensus 394 RLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~------~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG 467 (580)
T COG4618 394 RLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGE------EADPEKVIEAARLAGVHELILRLPQGYDTRIG 467 (580)
T ss_pred EecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccc------cCCHHHHHHHHHHcChHHHHHhCcCCccCccC
Confidence 999965 345689999999999999999999975322 356778999999999999999999998885
Q ss_pred -CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHH---HhcCCEEEEEccChhhHhhccEEEEecC
Q 000647 575 -WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKV---RAMGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 575 -~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l---~~~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
-|..|||||||||++|||||.+|.+++||||-|+||.+.|..+.+.+ |+.|.|+|+||||++.+..+|+|++|++
T Consensus 468 ~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~ 546 (580)
T COG4618 468 EGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQD 546 (580)
T ss_pred CCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecC
Confidence 46799999999999999999999999999999999999999998876 4579999999999999999999999986
No 102
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-46 Score=486.70 Aligned_cols=471 Identities=21% Similarity=0.268 Sum_probs=345.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCC-CChhHHHHccHHHHHHHHHHHH
Q 000647 147 ISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGRI-THPEQRLASDVPRFCSELSELV 225 (1374)
Q Consensus 147 l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~~-~npdqRit~Di~~~~~~~~~l~ 225 (1374)
+..+.+++++.+++..+..+.-...+++ -.+++|++.+++..+=+++|||..+ +-..+|.+.|++.+...+...+
T Consensus 861 ~~vY~~l~~~~~~~~~~rs~~~~~~~l~----aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~ 936 (1381)
T KOG0054|consen 861 LGVYALLGVASSLLTLLRSFLFAKGGLK----ASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTL 936 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHH
Confidence 3445555565555555555555556653 6678888888999999999998754 5788899999999988877777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH----HHHHHHHhHHHHH
Q 000647 226 QDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQ----LHSRLRTHAESIA 301 (1374)
Q Consensus 226 ~~~l~~~~~~~~~~~~l~~~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~----~~~~ir~~~E~Ia 301 (1374)
..++..++..+. ...+..+..|..++.++.. .++..++.+.+.+...+..++|+.-|. ....-..+.-+|+
T Consensus 937 ~~~~~~~~~~l~-~~~vi~~~~P~fli~~~pl----~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIR 1011 (1381)
T KOG0054|consen 937 EFFLQSLLNVLG-ILVVISYVTPWFLIAIIPL----GVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIR 1011 (1381)
T ss_pred HHHHHHHHHHHH-HHHHhhHHhHHHHHHHHHH----HHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceee
Confidence 666665554332 2222234444333332222 222233445555555566677776663 2333334567799
Q ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHH
Q 000647 302 FYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRY 381 (1374)
Q Consensus 302 ~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 381 (1374)
+|+.|++..+......+...+.+......+.|+++-.+++...+..+.++++++ ..+.. .+.+..|.
T Consensus 1012 Af~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl---~~~~~-~~~g~vGL--------- 1078 (1381)
T KOG0054|consen 1012 AFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVL---LPSGL-ISPGLVGL--------- 1078 (1381)
T ss_pred eccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccCCC-CCcchHHH---------
Confidence 999999998766666666555555556667777776665543332222222221 11111 11122221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCC-CCee
Q 000647 382 HTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPT-GNVL 460 (1374)
Q Consensus 382 ~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~ 460 (1374)
..++.+++.+.+.+++-....++.-..+++|+.|..+.++|.+... ....+...+|..+.|+|+|++..|.. ..++
T Consensus 1079 slsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~---~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~V 1155 (1381)
T KOG0054|consen 1079 SLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEI---EESRPPPSWPSKGEIEFEDLSLRYRPNLPLV 1155 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCC---cCCCCCCCCCCCCeEEEEEeEEEeCCCCcch
Confidence 1223344555666677777778888889999999988766511111 11113455788899999999998854 4789
Q ss_pred eeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhc
Q 000647 461 VENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLI 534 (1374)
Q Consensus 461 l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~ 534 (1374)
|+|+||+|++||+++|||++|||||||.++|-++.+|.+|+|.+||.| .++|++++.+||+|.+|+||+|.|+-
T Consensus 1156 Lk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLD 1235 (1381)
T KOG0054|consen 1156 LKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLD 1235 (1381)
T ss_pred hcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccC
Confidence 999999999999999999999999999999999999999999999986 47899999999999999999999985
Q ss_pred CCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCH
Q 000647 535 YPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTT 611 (1374)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~ 611 (1374)
-. ++.+|++++++|+.|+|.+.+.+.|.+.+. +.|.++|-||||.++|||||+++++|++|||+|+++|+
T Consensus 1236 Pf-------~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~ 1308 (1381)
T KOG0054|consen 1236 PF-------DEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDP 1308 (1381)
T ss_pred cc-------cccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCCh
Confidence 21 346899999999999999999998865433 67899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 612 DMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 612 ~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
++...|++.+++ .++|||.|+||++++-.+|+|++||+
T Consensus 1309 ~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~ 1348 (1381)
T KOG0054|consen 1309 ETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDA 1348 (1381)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeC
Confidence 999999999997 49999999999999999999999986
No 103
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.4e-46 Score=469.70 Aligned_cols=260 Identities=13% Similarity=0.162 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCc----ccc
Q 000647 1040 SQSFLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQ----KLL 1115 (1374)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~----~~v 1115 (1374)
...+..+..+......+.....+++|+.++.+..+.+++....+.......-+.....+.|+|+||+|.||+. +++
T Consensus 278 ~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~ 357 (555)
T TIGR01194 278 LYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFA 357 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCce
Confidence 3445566667777777888889999999997643221110000000000000001124689999999999863 469
Q ss_pred cccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhc
Q 000647 1116 ARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQII 1193 (1374)
Q Consensus 1116 L~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~ 1193 (1374)
|+|+||+|++||+++||||||||||||+++|.|+|+|++|+|.+||.|++++ +.+|+.+++|||||++|++|+|+|+.
T Consensus 358 l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~ 437 (555)
T TIGR01194 358 LGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDEG 437 (555)
T ss_pred eccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhcccc
Confidence 9999999999999999999999999999999999999999999999999987 46788899999999999999999962
Q ss_pred cCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCChhhhhhhccccchhhH
Q 000647 1194 YPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMVSHLVLI 1273 (1374)
Q Consensus 1194 yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSgGQrQrlai~~~~~~~ 1273 (1374)
|. ..+++++++++.++++++++.+|+||||. .+|||||||||||
T Consensus 438 -~~------------------------~~~~~~~~~~~~~~l~~~~~~lp~g~~t~----~~LSgGq~qRlal------- 481 (555)
T TIGR01194 438 -EH------------------------ASLDNAQQYLQRLEIADKVKIEDGGFSTT----TALSTGQQKRLAL------- 481 (555)
T ss_pred -cc------------------------hhHHHHHHHHHHcCCchhhcccccccCCc----ccCCHHHHHHHHH-------
Confidence 21 13455778899999999999999999985 5699999999999
Q ss_pred HhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH-HHH---hcCceEEEecCCCC
Q 000647 1274 QLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR-LAK---DMGITFVTSSQRPA 1349 (1374)
Q Consensus 1274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~-~~~---~~~~TvI~IaHRl~ 1349 (1374)
|||++++|+|+|||||||+||+++|+.+++ +.+ ..++|+|+||||++
T Consensus 482 -----------------------------aRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~ 532 (555)
T TIGR01194 482 -----------------------------ICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQ 532 (555)
T ss_pred -----------------------------HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH
Confidence 999999999999999999999999998865 322 35899999999999
Q ss_pred chhhccceEEEEcCC
Q 000647 1350 LIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1350 ~i~~~~~~l~l~~g~ 1364 (1374)
+++..|+++.+.+|+
T Consensus 533 ~~~~~d~i~~l~~G~ 547 (555)
T TIGR01194 533 YFELADQIIKLAAGC 547 (555)
T ss_pred HHHhCCEEEEEECCE
Confidence 999999999996553
No 104
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.2e-45 Score=423.51 Aligned_cols=250 Identities=27% Similarity=0.367 Sum_probs=208.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCC-cccccccceE
Q 000647 1043 FLAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPS-QKLLARQLTF 1121 (1374)
Q Consensus 1043 ~~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~ls~ 1121 (1374)
...+-.....-+++..+..+-.|+.++.+..+...+ + .|-+..+|.+..+++++.-|. .+++++|+||
T Consensus 289 LaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~---------~--m~LP~P~g~L~Ve~l~~~PPg~~~pil~~isF 357 (580)
T COG4618 289 LAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE---------R--MPLPAPQGALSVERLTAAPPGQKKPILKGISF 357 (580)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC---------C--CCCCCCCceeeEeeeeecCCCCCCcceeccee
Confidence 334444455556777777888999998876433221 1 122224799999999998887 5799999999
Q ss_pred EEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCC-C-
Q 000647 1122 EIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPL-S- 1197 (1374)
Q Consensus 1122 ~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~-~- 1197 (1374)
++.|||.+||+||||||||||.++|.|.|+|.+|+|.+||-|++++ +.+.++|+|.|||--||+|||+|||+--. .
T Consensus 358 ~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~ 437 (580)
T COG4618 358 ALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEA 437 (580)
T ss_pred EecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccC
Confidence 9999999999999999999999999999999999999999999999 47788999999999999999999997221 1
Q ss_pred hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhh
Q 000647 1198 REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLC 1276 (1374)
Q Consensus 1198 ~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~ 1276 (1374)
.+|.+++|++ ..+.++++-++|+||||.+ +.|..|||||||||++
T Consensus 438 d~~kIieAA~------------------------lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaL---------- 483 (580)
T COG4618 438 DPEKVIEAAR------------------------LAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIAL---------- 483 (580)
T ss_pred CHHHHHHHHH------------------------HcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHH----------
Confidence 1233344444 4455667888999999998 4689999999999999
Q ss_pred hcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH---HhcCceEEEecCCCCchhh
Q 000647 1277 SINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA---KDMGITFVTSSQRPALIPF 1353 (1374)
Q Consensus 1277 ~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~---~~~~~TvI~IaHRl~~i~~ 1353 (1374)
||||+.+|++++||||-|+||.+-|.+|.+.+ |..|+|+|+||||++.+..
T Consensus 484 --------------------------ARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~ 537 (580)
T COG4618 484 --------------------------ARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALAS 537 (580)
T ss_pred --------------------------HHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhh
Confidence 99999999999999999999999999887754 4579999999999999999
Q ss_pred ccceEEEEcC
Q 000647 1354 HSLELRLIDG 1363 (1374)
Q Consensus 1354 ~~~~l~l~~g 1363 (1374)
.|++|.+.||
T Consensus 538 ~Dkilvl~~G 547 (580)
T COG4618 538 VDKILVLQDG 547 (580)
T ss_pred cceeeeecCC
Confidence 9999999776
No 105
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=4e-45 Score=458.63 Aligned_cols=244 Identities=17% Similarity=0.173 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCCCCCCCCCCCCCCCEEEeeeEEeCCCcccccccceEEE
Q 000647 1044 LAFGDILELHRKFVELSGGINRIFELEELLDAAQPGDDEISGSSQHKWNSTDYQDSISFSKLDIITPSQKLLARQLTFEI 1123 (1374)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~Ri~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~g~I~f~~V~~~yp~~~~vL~~ls~~I 1123 (1374)
..+..+......+.....+.+|+.++.+..++. +. ... . +.. ..+.|+|+||+|.||+.+++|+|+||+|
T Consensus 277 ~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~---~~--~~~--~--~~~-~~~~i~~~~v~f~y~~~~~~l~~i~~~i 346 (547)
T PRK10522 277 TPLLSAVGALPTLLSAQVAFNKLNKLALAPYKA---EF--PRP--Q--AFP-DWQTLELRNVTFAYQDNGFSVGPINLTI 346 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---cc--ccc--c--ccC-cCceEEEEEEEEEeCCCCeEEecceEEE
Confidence 455566666677777888999999985321110 00 000 0 011 1357999999999997778999999999
Q ss_pred eCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcchHHHhccCCChhHH
Q 000647 1124 VPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEA 1201 (1374)
Q Consensus 1124 ~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~ 1201 (1374)
+|||+++||||||||||||+++|.|+|+|.+|+|.+||+|+++. +.+|+++++|||||++|+||+++| +..
T Consensus 347 ~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~---- 419 (547)
T PRK10522 347 KRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKP---- 419 (547)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCc----
Confidence 99999999999999999999999999999999999999999987 467889999999999999999998 211
Q ss_pred HHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCChhhhhhhccccchhhHHhhhcccc
Q 000647 1202 ELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKI 1281 (1374)
Q Consensus 1202 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~ 1281 (1374)
..+++++++++.+++.+.++. ++|.. .|.+||||||||++|
T Consensus 420 -------------------~~~~~~~~~~~~~~l~~~~~~-~~~~~----~G~~LSgGq~qRl~l--------------- 460 (547)
T PRK10522 420 -------------------ANPALVEKWLERLKMAHKLEL-EDGRI----SNLKLSKGQKKRLAL--------------- 460 (547)
T ss_pred -------------------hHHHHHHHHHHHcCCchhhhc-cccCC----CCCCCCHHHHHHHHH---------------
Confidence 123456677888888766543 33321 267899999999999
Q ss_pred cchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH----hcCceEEEecCCCCchhhccce
Q 000647 1282 SELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGITFVTSSQRPALIPFHSLE 1357 (1374)
Q Consensus 1282 ~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~----~~~~TvI~IaHRl~~i~~~~~~ 1357 (1374)
|||++++|+++|||||||+||.++|+.+.+.+. ..++|+|+||||+++++..|++
T Consensus 461 ---------------------ARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i 519 (547)
T PRK10522 461 ---------------------LLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRL 519 (547)
T ss_pred ---------------------HHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEE
Confidence 999999999999999999999999988766443 2489999999999999999999
Q ss_pred EEEEcCC
Q 000647 1358 LRLIDGE 1364 (1374)
Q Consensus 1358 l~l~~g~ 1364 (1374)
+.+.+|+
T Consensus 520 ~~l~~G~ 526 (547)
T PRK10522 520 LEMRNGQ 526 (547)
T ss_pred EEEECCE
Confidence 9996553
No 106
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-45 Score=410.26 Aligned_cols=335 Identities=21% Similarity=0.327 Sum_probs=263.3
Q ss_pred hHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHH
Q 000647 296 HAESIAFYGGENKEESHIQQKFKALTRHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKM 375 (1374)
Q Consensus 296 ~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~ 375 (1374)
|-|+||-|+.|+.|..+++...+.+.+...+......++++.+..++ +.....++...+. .+..+..|.|...+
T Consensus 131 nfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln~gQ~~I~---~~~l~~~m~~s~~---~v~~g~~TvgD~V~ 204 (497)
T COG5265 131 NFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLNFGQTAIF---STGLRVMMTMSAL---GVEEGQLTVGDLVN 204 (497)
T ss_pred hhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHH---HHHHHHHHhhcHH---HHhhccCCchhHHh
Confidence 78999999999999977776666555544443333445555555442 2222222222221 11123345665433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCcc-CCCCcEEEeeeEEEc
Q 000647 376 LSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYF-SEANYIEFSGVKVVT 454 (1374)
Q Consensus 376 ~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~v~~~~ 454 (1374)
.. .++++...++..+..+++++.+...-.++++++++.+.+.... +.. +..+ ...+.+.|+||+|.|
T Consensus 205 ~N------all~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~--pda----~~L~~~~~g~v~F~~V~F~y 272 (497)
T COG5265 205 VN------ALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDA--PDA----PPLWPVRLGAVAFINVSFAY 272 (497)
T ss_pred HH------HHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccC--CCC----ccccccccceEEEEEEEeec
Confidence 32 2344555666677778899998888888888887766554321 100 0111 234679999999999
Q ss_pred CCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCC
Q 000647 455 PTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGT 528 (1374)
Q Consensus 455 ~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~T 528 (1374)
...+++|+++||++++|+.++|+||||+||||++++|.++|++++|.|.+||++ ..+|+.||.|||+..||+.|
T Consensus 273 ~~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDt 352 (497)
T COG5265 273 DPRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDT 352 (497)
T ss_pred cccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhh
Confidence 888999999999999999999999999999999999999999999999999986 35788999999999999999
Q ss_pred HHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCCEEEEecC
Q 000647 529 LRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPKFAILDEC 605 (1374)
Q Consensus 529 v~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~illLDEp 605 (1374)
+..||.|+.+. .+++++..+++.+.+++++..+|.+.++ +.|-.||||||||+||||+++++|+|++|||+
T Consensus 353 i~yni~ygr~~------at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrvaiar~ilk~p~il~~dea 426 (497)
T COG5265 353 IAYNIKYGRPD------ATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAIARTILKNPPILILDEA 426 (497)
T ss_pred HHHHHhccCcc------ccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHHHHHHHHhcCCCEEEEehh
Confidence 99999998653 5788999999999999999999988766 45778999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecCCCceEEe
Q 000647 606 TSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDGEGEWRVH 656 (1374)
Q Consensus 606 tsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~~g~~~~~ 656 (1374)
|||||.++|+.|+..+++ .|.|.++|+||++++..+|.|+++++ |..++
T Consensus 427 tsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~--g~i~e 477 (497)
T COG5265 427 TSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDN--GRIVE 477 (497)
T ss_pred hhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeC--CEEEe
Confidence 999999999999999986 59999999999999999999999986 34444
No 107
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-45 Score=432.36 Aligned_cols=198 Identities=28% Similarity=0.378 Sum_probs=164.4
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-------cccccE
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEI 515 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-------~~~~~i 515 (1374)
..++++|+++.|| +.++|+++||++.+||+++++|.||+|||||+|+|+|.++|++|+|.++|... .....|
T Consensus 7 ~ll~~~~i~K~Fg-gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 7 PLLELRGISKSFG-GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred ceeeeecceEEcC-CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 4689999999996 67899999999999999999999999999999999999999999999999641 234679
Q ss_pred EEEecCCCCCc-CCHHHHhcCCCCCCcccCCCC----HHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000647 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLT----HGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1374)
Q Consensus 516 ~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~----~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1374)
..|+|++.+++ .||.|||.++........-.+ ..+..++|+.+++....+.. ..+||+||||-|+||
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~--------v~~LsiaqrQ~VeIA 157 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTL--------VGDLSIAQRQMVEIA 157 (500)
T ss_pred EEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhh--------hhhCCHHHHHHHHHH
Confidence 99999998764 699999988765332111122 23456778888775222221 258999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHH---hcCCEEEEEccChhhH-hhccEEEEecC
Q 000647 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 591 Ral~~~p~illLDEptsaLD~~~~~~i~~~l~---~~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||+..+++++|||||||+|+....+.+++.++ +.|.++|+|||+++.+ +.||+|.+|.+
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRD 220 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRD 220 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeC
Confidence 99999999999999999999998888877654 5799999999999887 57999999975
No 108
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.8e-42 Score=397.80 Aligned_cols=198 Identities=28% Similarity=0.366 Sum_probs=167.0
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-------ccccccE
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNKEI 515 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-------~~~~~~i 515 (1374)
..++++++++.|| +..+.+|+||+|++||+.+|.|.||+|||||+++|.|+|+|++|+|.++|+. ...+..|
T Consensus 3 ~~l~~~~itK~f~-~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~GI 81 (501)
T COG3845 3 PALEMRGITKRFP-GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLGI 81 (501)
T ss_pred ceEEEeccEEEcC-CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcCC
Confidence 3589999999998 7889999999999999999999999999999999999999999999999964 2356789
Q ss_pred EEEecCCCCCc-CCHHHHhcCCCCCCcc---cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000647 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQE---VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1374)
Q Consensus 516 ~~v~Q~p~l~~-~Tv~eni~~~~~~~~~---~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1374)
|+|.|++.+++ -|+.|||..+...... ......+++.++.+..||.=..+.. ...||-|||||+.|-+
T Consensus 82 GMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~--------V~dLsVG~qQRVEIlK 153 (501)
T COG3845 82 GMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAK--------VADLSVGEQQRVEILK 153 (501)
T ss_pred cEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCccce--------eecCCcchhHHHHHHH
Confidence 99999998876 5999999998754211 0112234566677777765443333 2579999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHH---hcCCEEEEEccChhhHh-hccEEEEecC
Q 000647 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 592 al~~~p~illLDEptsaLD~~~~~~i~~~l~---~~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||++|++||||||||-|-|...+++++.++ +.|+|||+|||++..+. .||++-+|..
T Consensus 154 aLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~ 215 (501)
T COG3845 154 ALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRR 215 (501)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeC
Confidence 9999999999999999999999999887665 57999999999998875 6999999975
No 109
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-44 Score=375.04 Aligned_cols=197 Identities=28% Similarity=0.389 Sum_probs=173.1
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-------ccccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-------~~~~~~i~ 516 (1374)
.|+++|++++| ++..+|+++|++|++||.++|+||||||||||+|+|.||.+|++|+|.++|.+ ..+|+++|
T Consensus 2 mi~i~~l~K~f-g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vG 80 (240)
T COG1126 2 MIEIKNLSKSF-GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVG 80 (240)
T ss_pred eEEEEeeeEEe-CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcC
Confidence 58999999998 46789999999999999999999999999999999999999999999999953 24678999
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCC-CcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~-~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
+|+|+..||+ .|+.||+.++... .........++..+.|+++||.+..+.+| .+||||||||+||||||+
T Consensus 81 mVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP--------~qLSGGQqQRVAIARALa 152 (240)
T COG1126 81 MVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP--------AQLSGGQQQRVAIARALA 152 (240)
T ss_pred eecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc--------cccCcHHHHHHHHHHHHc
Confidence 9999999987 5999999986422 11112223455678899999999999999 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHH---hcCCEEEEEccChhhHh-hccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~---~~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
.+|+++++|||||||||+...++.+.++ +.|.|.|+|||.+.+++ .+|+|+.||+
T Consensus 153 M~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~ 211 (240)
T COG1126 153 MDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQ 211 (240)
T ss_pred CCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeC
Confidence 9999999999999999999998877554 57999999999999996 6899999986
No 110
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-43 Score=376.58 Aligned_cols=198 Identities=28% Similarity=0.364 Sum_probs=176.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-ccccccEEEEecCC
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQRP 522 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~~~~~~i~~v~Q~p 522 (1374)
.+++++|++.|++ ..+|+|+||+|++||+++|+||||||||||+|+|+|+.+|++|+|.++|.. .....+++||+|++
T Consensus 3 ~l~i~~v~~~f~~-~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~~ 81 (248)
T COG1116 3 LLEIEGVSKSFGG-VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQED 81 (248)
T ss_pred eEEEEeeEEEeCc-eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEeccC
Confidence 5889999999864 889999999999999999999999999999999999999999999999865 34457899999999
Q ss_pred CCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000647 523 YTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 601 (1374)
Q Consensus 523 ~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ill 601 (1374)
.+++. |++||+.++............+++.++|+.+||.++.+++| .+||||||||+||||||+.+|++|+
T Consensus 82 ~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P--------~qLSGGMrQRVaiARAL~~~P~lLL 153 (248)
T COG1116 82 ALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP--------HQLSGGMRQRVAIARALATRPKLLL 153 (248)
T ss_pred cccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc--------cccChHHHHHHHHHHHHhcCCCEEE
Confidence 98885 99999999976543223334557889999999999999999 6899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHH----hcCCEEEEEccChhhH-hhccEEEEecCC
Q 000647 602 LDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDGE 650 (1374)
Q Consensus 602 LDEptsaLD~~~~~~i~~~l~----~~~~TiI~vtH~~~~~-~~~d~il~l~~~ 650 (1374)
||||++|||..+...+.+.+. +.++|+++||||.+.. ..+|+|++|.++
T Consensus 154 lDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 154 LDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred EcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999999998887654 4689999999999876 468999999864
No 111
>PF06472 ABC_membrane_2: ABC transporter transmembrane region 2; InterPro: IPR010509 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This region covers the N terminus and first two membrane regions of a small family of ABC transporters. Mutations in this domain in P28288 from SWISSPROT are believed responsible for Zellweger Syndrome-2 []; mutations in P33897 from SWISSPROT are responsible for recessive X-linked adrenoleukodystrophy []. A Saccharomyces cerevisiae protein containing this domain is involved in the import of long-chain fatty acids [].; GO: 0006810 transport, 0016020 membrane
Probab=100.00 E-value=7.1e-41 Score=383.83 Aligned_cols=275 Identities=28% Similarity=0.484 Sum_probs=262.8
Q ss_pred hHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 85 LKSLQVLAAILLSEMGKMGARDLLALVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFQLISENILLCFLLSTMHSTS 164 (1374)
Q Consensus 85 ~~~l~~Ll~i~~p~~~~~~~~~l~~~~~l~~~~t~ls~~~~~~~~~~~~al~~~~~~~f~~~l~~~~~~~~~~~~~~~~~ 164 (1374)
++++++|+++.+|+.+++++.+++++++++++++.++++++.|+|+||++++++|.+.|++.++.+++++++.+++++..
T Consensus 7 lr~f~~L~~~~~~~~~~~~~~ll~~ll~l~l~~~~lsv~~~~~~g~~~~aL~~~d~~~f~~~l~~~~~l~~~~~~l~~~~ 86 (281)
T PF06472_consen 7 LRRFWRLARIYWPSERWKAWLLLLVLLLLLLARVYLSVRINFWNGDFYNALQQKDLQAFWRLLLLFLLLAIASALLNSIL 86 (281)
T ss_pred HHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 165 KYITGTLSLQFRKIVTKLIHTRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCS 244 (1374)
Q Consensus 165 ~yl~~~l~~~~R~~lt~~l~~~yl~~~~~y~~~~~d~~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 244 (1374)
+|+++.++++||+|||++++++|+++.+||+++..++++|||||||++|+++||+.+++++.+++.++++.+.|++.++.
T Consensus 87 ~yl~~~L~l~wR~~Lt~~~~~~yl~~~~yY~l~~~~~~idNpDQRIteDi~~f~~~~~~l~~~~~~~~~~l~~f~~~L~~ 166 (281)
T PF06472_consen 87 KYLRQRLALRWREWLTRHLHDRYLSNRTYYRLNNLDGRIDNPDQRITEDIRKFTESSLSLFLGLLKPILDLISFSVILWS 166 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCchhHhhhccccccccHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999989999999999999999999999999999999999999999987
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 000647 245 YASPKYVFWILAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHM 324 (1374)
Q Consensus 245 ~~~~~l~~~~l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~ 324 (1374)
..++..++.+++|+++++.++++++|++.+++.++|++||+||+.|.++|+|+|+||+|+||+.|+++++++|+++.+++
T Consensus 167 ~~g~~~~~~~~~y~~~~t~~~~~ig~~l~~l~~~~q~~Ea~fR~~l~r~r~naE~IA~~~Ge~~E~~~l~~~f~~l~~~~ 246 (281)
T PF06472_consen 167 ISGWLGPWAALIYAILGTLITHWIGPPLGRLNAEQQRLEADFRYALVRLRENAESIAFYRGESRERRRLDRRFDALIDNW 246 (281)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhchHHHHHHHHHHhHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 66666666678888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 000647 325 RVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFF 359 (1374)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 359 (1374)
++.++.+.++++++.++.++++..+++++++||+|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~F 281 (281)
T PF06472_consen 247 RRLIRRRLRLGFFTNFYVKYLSSILPYLVVAPPYF 281 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Confidence 99999999999999998889999999999999875
No 112
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-43 Score=381.93 Aligned_cols=198 Identities=27% Similarity=0.378 Sum_probs=179.2
Q ss_pred cEEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC---------cc
Q 000647 444 YIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SD 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~---------~~ 510 (1374)
+|++++|++.|+.+ ..+++|+||+|++||+.+|+|+||+|||||+|++.+|-.|++|+|.++|.+ ..
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 47899999988752 469999999999999999999999999999999999999999999999964 23
Q ss_pred ccccEEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHH
Q 000647 511 LNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
.|++||++||++.++. .||.+|+.||.......+.....++.++|+.+||.+..+++| .+|||||||||+|
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP--------~qLSGGQKQRVaI 152 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP--------AQLSGGQKQRVAI 152 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc--------hhcCcchhhHHHH
Confidence 5789999999999987 699999999987655433345667889999999999999999 7999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||+.+|++|+.|||||||||++.+.|.+.|++ .|.||++|||.++.++ .||++.+|++
T Consensus 153 ARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~ 217 (339)
T COG1135 153 ARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQ 217 (339)
T ss_pred HHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeC
Confidence 9999999999999999999999999999998864 5999999999999996 7999999986
No 113
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.2e-41 Score=367.42 Aligned_cols=198 Identities=30% Similarity=0.422 Sum_probs=170.1
Q ss_pred EEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------c---c-c
Q 000647 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------S---D-L 511 (1374)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~---~-~ 511 (1374)
++++||++.|..+ ..+|+++||+|++||+++|+|||||||||||++|.|+..|++|.|.++|.+ . . .
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 5789999988654 369999999999999999999999999999999999999999999999954 0 1 3
Q ss_pred cccEEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHh-cCCCCccccCCCCCChhHHHHHHH
Q 000647 512 NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLD-RYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 512 ~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
+++||||+|+..|.+ .|++|||.+|.............++.++++.+||.+... +.| .+||||||||+||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p--------~eLSGGqqQRVAI 153 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP--------SELSGGQQQRVAI 153 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc--------hhcCHHHHHHHHH
Confidence 468999999998765 699999997654322211123456778899999997777 667 6899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecCC
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGE 650 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~~ 650 (1374)
||||+++|++++.||||.+||.++.+.+++.+++ .|+|+|+||||+....+||+++.+.++
T Consensus 154 ARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG 218 (226)
T COG1136 154 ARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDG 218 (226)
T ss_pred HHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999988764 489999999999999999999999763
No 114
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.3e-41 Score=346.31 Aligned_cols=198 Identities=26% Similarity=0.353 Sum_probs=177.3
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC---------cccccc
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SDLNKE 514 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~---------~~~~~~ 514 (1374)
+|+|+||++.|+++.++|+|+||+|++||++.|+||||||||||+|+|.+...|++|+|.++|.+ .-+|++
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 47999999999999889999999999999999999999999999999999999999999999975 136789
Q ss_pred EEEEecCCCCC-cCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 515 IFYVPQRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 515 i~~v~Q~p~l~-~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
||+|+|+.-+. .-|+.||+.||..........-.+++.++|+.+||.+..+.+| .+||||||||++||||+
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP--------~~LSGGEQQRvaIARAi 152 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP--------SQLSGGEQQRVAIARAI 152 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc--------cccCchHHHHHHHHHHH
Confidence 99999998765 4699999999987654443444567889999999999999998 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhhc-cEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFH-DVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~~-d~il~l~~ 649 (1374)
+++|++||.||||.+||++...+|++.+.+ .|+||++.|||.+++... .+++.+++
T Consensus 153 V~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~ 212 (223)
T COG2884 153 VNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALED 212 (223)
T ss_pred ccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeC
Confidence 999999999999999999999999988765 699999999999999754 57777764
No 115
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-41 Score=358.96 Aligned_cols=197 Identities=27% Similarity=0.373 Sum_probs=173.2
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
+|+|+||++.|. ++.+++|+||+|++||+++++|||||||||++|+|.++++|++|+|.++|.+ .++|++|||
T Consensus 1 MI~~~nvsk~y~-~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 1 MIEFENVSKRYG-NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred CceeeeeehhcC-CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 478999999985 7889999999999999999999999999999999999999999999999975 357899999
Q ss_pred EecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh--hHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 518 VPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE--YLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 518 v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~--~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
|-|.--||+ .||.|||.+-..-....++..++++.+.++.++|+ ++.+|+| ++||||||||+.+||||+
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP--------~eLSGGQQQRVGv~RALA 151 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP--------HELSGGQQQRVGVARALA 151 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc--------hhcCcchhhHHHHHHHHh
Confidence 999988876 69999998743222222223456788999999996 4899999 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHH----hcCCEEEEEccChhhH-hhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~----~~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
.+|++++||||++|||+-++..+.+.++ +.|+|+|+||||++.. +.+|+|.+|++
T Consensus 152 adP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 152 ADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred cCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecC
Confidence 9999999999999999999999988664 3599999999999875 78999999985
No 116
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-40 Score=362.86 Aligned_cols=198 Identities=28% Similarity=0.400 Sum_probs=171.8
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-ccc--cccEEEEe
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDL--NKEIFYVP 519 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~~~--~~~i~~v~ 519 (1374)
..|+++|+++.|.++ ++|+|+||+|++|++++|+||||||||||+|+|+|+.+|.+|+|.+.|.+ ... +.+|||||
T Consensus 3 ~~i~v~nl~v~y~~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVP 81 (254)
T COG1121 3 PMIEVENLTVSYGNR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVP 81 (254)
T ss_pred cEEEEeeeEEEECCE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcC
Confidence 368999999999655 79999999999999999999999999999999999999999999998864 122 36899999
Q ss_pred cCC---CCCcCCHHHHhcCCCCCCcc----cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000647 520 QRP---YTAVGTLRDQLIYPLTSDQE----VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1374)
Q Consensus 520 Q~p---~l~~~Tv~eni~~~~~~~~~----~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1374)
|+. +-|+.||+|-+..+...... ....+.+++.++|+.+|+.++.++.. .+|||||+||+.||||
T Consensus 82 Q~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i--------~~LSGGQ~QRV~lARA 153 (254)
T COG1121 82 QKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQI--------GELSGGQKQRVLLARA 153 (254)
T ss_pred cccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcc--------cccCcHHHHHHHHHHH
Confidence 975 55778999999887433211 11234578999999999999999854 5899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 593 l~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|+++|++++|||||+|+|+.++..+++.+++ .|+||++||||++.+. ++|+|+.|++
T Consensus 154 L~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~ 214 (254)
T COG1121 154 LAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNR 214 (254)
T ss_pred hccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcC
Confidence 9999999999999999999999999987753 5999999999999874 7999999986
No 117
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.9e-40 Score=364.80 Aligned_cols=197 Identities=28% Similarity=0.388 Sum_probs=173.2
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||+|+|+|+.+|.+|+|.++|.+ +++.++++|
T Consensus 2 ~L~~~~ls~~y~-~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~ 80 (258)
T COG1120 2 MLEVENLSFGYG-GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAY 80 (258)
T ss_pred eeEEEEEEEEEC-CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEE
Confidence 478999999996 7899999999999999999999999999999999999999999999999975 356789999
Q ss_pred EecCCCCCc-CCHHHHhcCCCCCCcc----cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000647 518 VPQRPYTAV-GTLRDQLIYPLTSDQE----VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1374)
Q Consensus 518 v~Q~p~l~~-~Tv~eni~~~~~~~~~----~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1374)
|||.+..+. -||+|-+.+|...... ..+.+.+.+.++|+.+++.++.+|.- .+||||||||+.||||
T Consensus 81 vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~--------~~LSGGerQrv~iArA 152 (258)
T COG1120 81 VPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV--------DELSGGERQRVLIARA 152 (258)
T ss_pred eccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc--------cccChhHHHHHHHHHH
Confidence 999986654 5999999987543211 12223346788999999999999864 6899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 593 l~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|+++|++++||||||+||.....++++.+++ .|+|+|+|.||+++. .+||+++.|++
T Consensus 153 LaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~ 214 (258)
T COG1120 153 LAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKD 214 (258)
T ss_pred HhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999988764 489999999999986 68999999986
No 118
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=5.2e-39 Score=370.89 Aligned_cols=183 Identities=22% Similarity=0.238 Sum_probs=140.5
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEec
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~Vp 1178 (1374)
-|.|+||+|.|++.+.+++++||-|.++++|++|||||+|||||++++.+...|..|.|..... ..++.--
T Consensus 389 vi~~~nv~F~y~~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H---------~~~~~y~ 459 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH---------NKLPRYN 459 (614)
T ss_pred eEEEeccccCCCCcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc---------ccchhhh
Confidence 4899999999998889999999999999999999999999999999999999999999854332 2233333
Q ss_pred CCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1179 QRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1179 Q~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
|+ .-+.++|-.+..|-.+.+... +-.-+++..+|...||.... ..-.-.+||+
T Consensus 460 Qh-------~~e~ldl~~s~le~~~~~~~~-----------~~~~e~~r~ilgrfgLtgd~---------q~~p~~~LS~ 512 (614)
T KOG0927|consen 460 QH-------LAEQLDLDKSSLEFMMPKFPD-----------EKELEEMRSILGRFGLTGDA---------QVVPMSQLSD 512 (614)
T ss_pred hh-------hHhhcCcchhHHHHHHHhccc-----------cchHHHHHHHHHHhCCCccc---------cccchhhccc
Confidence 33 234454433322222222110 12345677888877764221 1112468999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHhcC
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMG 1338 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~~~ 1338 (1374)
|||-|+++ ||+.+..|.+|||||||++||.++.+++.+.+.+..
T Consensus 513 Gqr~rVlF------------------------------------a~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~~ 556 (614)
T KOG0927|consen 513 GQRRRVLF------------------------------------ARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEFP 556 (614)
T ss_pred ccchhHHH------------------------------------HHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhccC
Confidence 99999999 999999999999999999999999999999888888
Q ss_pred ceEEEecCCCCchhh
Q 000647 1339 ITFVTSSQRPALIPF 1353 (1374)
Q Consensus 1339 ~TvI~IaHRl~~i~~ 1353 (1374)
-+||.|+|..-+|..
T Consensus 557 Ggvv~vSHDfrlI~q 571 (614)
T KOG0927|consen 557 GGVVLVSHDFRLISQ 571 (614)
T ss_pred CceeeeechhhHHHH
Confidence 899999999877754
No 119
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-40 Score=346.04 Aligned_cols=203 Identities=23% Similarity=0.352 Sum_probs=175.6
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC---------cccccc
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SDLNKE 514 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~---------~~~~~~ 514 (1374)
.|+++||+..||+++.+|+||||+|++||+++|+||||||||||+|+|.|+++|++|+|.++|.+ .+++++
T Consensus 3 ~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~~ 82 (258)
T COG3638 3 MIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRRD 82 (258)
T ss_pred eEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHHh
Confidence 68999999999999999999999999999999999999999999999999999999999999954 246789
Q ss_pred EEEEecCCCCCc-CCHHHHhcCCCCCCcc--------cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHH
Q 000647 515 IFYVPQRPYTAV-GTLRDQLIYPLTSDQE--------VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQ 585 (1374)
Q Consensus 515 i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~--------~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQ 585 (1374)
|||++|+|.|.+ .|+.+|++.|.-.... ..+.+.....++|+.+|+.+..-... ++|||||||
T Consensus 83 iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--------~~LSGGQQQ 154 (258)
T COG3638 83 IGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--------STLSGGQQQ 154 (258)
T ss_pred ceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh--------ccCCcchhH
Confidence 999999998865 5999999876543211 11223445678899999988765533 689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecCCCceEE
Q 000647 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGEGEWRV 655 (1374)
Q Consensus 586 RlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~~g~~~~ 655 (1374)
||+|||||+++|++++.|||+++|||.+.+++++.+++ .|+|+|+.-|+.++++ |||||+-|+. |...+
T Consensus 155 RVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~-G~ivf 228 (258)
T COG3638 155 RVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKA-GRIVF 228 (258)
T ss_pred HHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecC-CcEEE
Confidence 99999999999999999999999999999999998864 5899999999999985 8999999985 44444
No 120
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.2e-40 Score=375.97 Aligned_cols=206 Identities=20% Similarity=0.236 Sum_probs=184.7
Q ss_pred CCEEEeeeEEeCCC-cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccE
Q 000647 1098 DSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 1174 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~-~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i 1174 (1374)
|.|+|+||++.||. .+++|+|+||+|++||+++|+||||||||||+++|+|+++ .+|+|.+||.++... ..+|++|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 57999999999974 5679999999999999999999999999999999999998 789999999999876 3567889
Q ss_pred EEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc-ccc
Q 000647 1175 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL-NWE 1253 (1374)
Q Consensus 1175 ~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~-~~g 1253 (1374)
+||||+|.+|++|+++|++ +.. ...+++++++++.++|...+...|+|+|+.+ +.|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~-~~~----------------------~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLD-PYG----------------------KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred EEECCCcccchhhHHHHhh-hcc----------------------CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 9999999999999999996 221 1234567888999999999999999999987 478
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||+|||||+|+ |||++++|+|+||||||++||.++.+.+++.
T Consensus 137 ~~LS~G~~qrl~L------------------------------------aRall~~p~illlDEpts~LD~~~~~~l~~~ 180 (275)
T cd03289 137 CVLSHGHKQLMCL------------------------------------ARSVLSKAKILLLDEPSAHLDPITYQVIRKT 180 (275)
T ss_pred CCCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEECccccCCHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999998887
Q ss_pred HHh--cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1334 AKD--MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1334 ~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
++. .++|+|+|+||++++...|+++.+.+|
T Consensus 181 l~~~~~~~tii~isH~~~~i~~~dri~vl~~G 212 (275)
T cd03289 181 LKQAFADCTVILSEHRIEAMLECQRFLVIEEN 212 (275)
T ss_pred HHHhcCCCEEEEEECCHHHHHhCCEEEEecCC
Confidence 764 489999999999999889999999544
No 121
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-39 Score=369.97 Aligned_cols=197 Identities=26% Similarity=0.383 Sum_probs=175.3
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-c---cccccEEEEe
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-S---DLNKEIFYVP 519 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~---~~~~~i~~v~ 519 (1374)
.|+++||++.|.+.. +++++||+|++||+++|+||||||||||||+|+||.+|++|+|.++|.+ . ...++|++||
T Consensus 3 ~i~l~~v~K~yg~~~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVF 81 (338)
T COG3839 3 ELELKNVRKSFGSFE-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVF 81 (338)
T ss_pred EEEEeeeEEEcCCce-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEe
Confidence 589999999996444 9999999999999999999999999999999999999999999999965 2 2357899999
Q ss_pred cCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|++.|++ .||+|||.||.......+...+.++.++++.++|++++++.| .+||||||||+|||||++++|+
T Consensus 82 Q~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P--------~~LSGGQrQRVAlaRAlVr~P~ 153 (338)
T COG3839 82 QNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP--------LQLSGGQRQRVALARALVRKPK 153 (338)
T ss_pred CCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc--------ccCChhhHHHHHHHHHHhcCCC
Confidence 9998876 699999999988765444556788999999999999999999 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHH----hcCCEEEEEccChhhH-hhccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~----~~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+++||||+|+||.+....+...++ +.|.|+|.||||...+ ..+|+|.+|++
T Consensus 154 v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~ 209 (338)
T COG3839 154 VFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMND 209 (338)
T ss_pred EEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeC
Confidence 999999999999998887766554 3589999999997665 58999999983
No 122
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-39 Score=343.31 Aligned_cols=196 Identities=34% Similarity=0.469 Sum_probs=171.0
Q ss_pred cEEEeeeEEEcCCCC---eeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-------ccccc
Q 000647 444 YIEFSGVKVVTPTGN---VLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNK 513 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~---~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-------~~~~~ 513 (1374)
.++++|+++.|+.++ ++++|+||+|.+||+++|+|+||||||||.|+|+|+.+|++|+|.++|.. ....+
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 589999999997655 69999999999999999999999999999999999999999999999964 13467
Q ss_pred cEEEEecCCCC---CcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChh-HHhcCCCCccccCCCCCChhHHHHHHH
Q 000647 514 EIFYVPQRPYT---AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY-LLDRYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 514 ~i~~v~Q~p~l---~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
.+-+|||+|+- +..||++-|.-|...... .....++.++|+.+||.. +.+++| .+|||||+||+||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~--~~~~~~i~~~L~~VgL~~~~l~R~P--------~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGL--SKSQQRIAELLDQVGLPPSFLDRRP--------HELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCc--cHHHHHHHHHHHHcCCCHHHHhcCc--------hhcChhHHHHHHH
Confidence 89999999983 456999988877654221 123456889999999964 788888 6899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||..+|++||||||||+||......+.+.+.+ .+.|+|+||||++.+. .||+|++|++
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~ 217 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDN 217 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeC
Confidence 9999999999999999999999999999887653 5889999999999986 6999999986
No 123
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-39 Score=354.42 Aligned_cols=198 Identities=30% Similarity=0.442 Sum_probs=178.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-------ccccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-------SDLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-------~~~~~~i~ 516 (1374)
.++++|++|.|+++.++++|+||+|++||.++|+|+||||||||+++++|+++|++|+|.++|.+ ..+++++|
T Consensus 3 ~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG 82 (235)
T COG1122 3 MIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVG 82 (235)
T ss_pred eEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceE
Confidence 58899999999877789999999999999999999999999999999999999999999999864 24678999
Q ss_pred EEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 517 YVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 517 ~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
||+|+| .++..||.|.+.|+..+.....+..++++.++++.+++.++.++.| .+||||||||+|||.+|+
T Consensus 83 ~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p--------~~LSGGqkqRvaIA~vLa 154 (235)
T COG1122 83 LVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP--------FNLSGGQKQRVAIAGVLA 154 (235)
T ss_pred EEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc--------cccCCcceeeHHhhHHHH
Confidence 999999 5778899999999876654333334567889999999999988887 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh---c-CCEEEEEccChhhHh-hccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~---~-~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
.+|+++|||||||+||+...+.+++.+++ . |+|+|++|||++.+. ++|++++|++
T Consensus 155 ~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~ 214 (235)
T COG1122 155 MGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDD 214 (235)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999888764 3 689999999999886 5999999986
No 124
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-39 Score=371.01 Aligned_cols=198 Identities=25% Similarity=0.387 Sum_probs=174.9
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-c---cccccEEEE
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-S---DLNKEIFYV 518 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~---~~~~~i~~v 518 (1374)
..++++||++.|. +..+++|+||+|++||++++.||||||||||||+|+|+..|++|+|.++|.+ . .-++.|++|
T Consensus 4 ~~l~i~~v~k~yg-~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~V 82 (352)
T COG3842 4 PALEIRNVSKSFG-DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMV 82 (352)
T ss_pred ceEEEEeeeeecC-CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhccccee
Confidence 4689999999995 7889999999999999999999999999999999999999999999999975 1 235789999
Q ss_pred ecCCCCCc-CCHHHHhcCCCCCCcccC-CCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000647 519 PQRPYTAV-GTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1374)
Q Consensus 519 ~Q~p~l~~-~Tv~eni~~~~~~~~~~~-~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1374)
+|+.-||+ .||+|||.||+....... ....+++.++|+.++|+++.++.| .+||||||||+||||||..+
T Consensus 83 FQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p--------~qLSGGQqQRVALARAL~~~ 154 (352)
T COG3842 83 FQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP--------HQLSGGQQQRVALARALVPE 154 (352)
T ss_pred ecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh--------hhhChHHHHHHHHHHHhhcC
Confidence 99998886 699999999987332211 223458899999999999999998 68999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHH----hcCCEEEEEccChhh-HhhccEEEEecC
Q 000647 597 PKFAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPAL-VAFHDVVLSLDG 649 (1374)
Q Consensus 597 p~illLDEptsaLD~~~~~~i~~~l~----~~~~TiI~vtH~~~~-~~~~d~il~l~~ 649 (1374)
|++|+||||.||||.+.+.++...++ +.|+|.|+||||.+. +..+|+|.+|++
T Consensus 155 P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~ 212 (352)
T COG3842 155 PKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMND 212 (352)
T ss_pred cchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccC
Confidence 99999999999999998888776654 469999999999876 478999999986
No 125
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9e-39 Score=338.29 Aligned_cols=196 Identities=28% Similarity=0.367 Sum_probs=171.6
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC---------cccc
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------SDLN 512 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~---------~~~~ 512 (1374)
...|++++|++.+ +++.+++|+||+|++||+++|+||||||||||+|+|.|+++|++|+|.++|.+ .+++
T Consensus 6 ~~~I~vr~v~~~f-G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 6 EPLIEVRGVTKSF-GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred cceEEEeeeeeec-CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 3579999999998 57889999999999999999999999999999999999999999999999975 1367
Q ss_pred ccEEEEecCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHH----HHHHHHcCChhH-HhcCCCCccccCCCCCChhHHHH
Q 000647 513 KEIFYVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGM----VELLKNVDLEYL-LDRYPPEKEINWGDELSLGEQQR 586 (1374)
Q Consensus 513 ~~i~~v~Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~----~~~l~~~~L~~~-~~~~~~~~~~~~g~~LSgGqkQR 586 (1374)
+++|+++|.--||.. ||.||+.||...... .++..+ ..-|+.+||... .+.+| .+||||+++|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~---lp~~~i~~lv~~KL~~VGL~~~~~~~~P--------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTK---LPESLIRELVLMKLELVGLRGAAADLYP--------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhcc---CCHHHHHHHHHHHHHhcCCChhhhhhCc--------hhhcchHHHH
Confidence 899999999999975 999999999764322 333333 345889999887 78888 7899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 587 lalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+|||||+..+|+++++|||||||||.+...+-+++++ .|.|+|+||||++.+. .||+++++.+
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~ 221 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLAD 221 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeC
Confidence 9999999999999999999999999998887776653 5999999999998765 6899999975
No 126
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=336.05 Aligned_cols=201 Identities=23% Similarity=0.258 Sum_probs=170.1
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCc-----cEEEeCCCC--------c
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVS-----GHIAKPGVG--------S 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~-----G~I~~~g~~--------~ 509 (1374)
..++++|++++|. .+.+|+|+|++|+++++++++||||||||||+|++.++.+... |+|.++|.+ .
T Consensus 6 ~~~~~~~l~~yYg-~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 6 PAIEVRDLNLYYG-DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred ceeEecceeEEEC-chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 4689999999984 6789999999999999999999999999999999999988765 999999975 2
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHH-hcCCCCccccCCCCCChhHHHHHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLL-DRYPPEKEINWGDELSLGEQQRLG 588 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~~~~~~g~~LSgGqkQRla 588 (1374)
++|+++|.|+|+|.-|+.||.||+.||..........-++.+++.|+.+.|++-+ +++. .-+..|||||||||+
T Consensus 85 ~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~-----~sa~~LSGGQQQRLc 159 (253)
T COG1117 85 ELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLH-----KSALGLSGGQQQRLC 159 (253)
T ss_pred HHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhh-----CCccCCChhHHHHHH
Confidence 4789999999999999999999999987654333233455678889999997654 3331 123579999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 589 lARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||+.-+|++|+||||||||||.+..+|-+.+.+ .+-|||+|||.++... .+|+...+-.
T Consensus 160 IARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~ 223 (253)
T COG1117 160 IARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYL 223 (253)
T ss_pred HHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcc
Confidence 99999999999999999999999999988887765 4789999999998875 5688877753
No 127
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-39 Score=350.16 Aligned_cols=199 Identities=24% Similarity=0.301 Sum_probs=169.9
Q ss_pred EEEeeeEEeCCC----cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-----cCC
Q 000647 1100 ISFSKLDIITPS----QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-----AGS 1170 (1374)
Q Consensus 1100 I~f~~V~~~yp~----~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-----~~~ 1170 (1374)
|+|++|+..|+. ...+|+|+||+|++||..||+|+||+|||||+|++-+|-.|++|+|.+||+||..+ ...
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 899999998876 25799999999999999999999999999999999999999999999999999988 256
Q ss_pred cccEEEecCCCCCCC-cchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCC
Q 000647 1171 GCGIFYVPQRPYTCL-GTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGW 1246 (1374)
Q Consensus 1171 r~~i~~VpQ~P~Lf~-GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gl 1246 (1374)
|++|++|+|++-|++ -|+.+|++||+.- +.+++ .+.+.+.|+-|||.+...+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei-------------------~~RV~elLelVgL~dk~~~----- 137 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEI-------------------KQRVAELLELVGLSDKADR----- 137 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHH-------------------HHHHHHHHHHcCChhhhcc-----
Confidence 888999999999997 7999999999741 11111 2346678888888655433
Q ss_pred ccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHH
Q 000647 1247 DANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDV 1326 (1374)
Q Consensus 1247 dt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~ 1326 (1374)
.+.+||||||||++| ||||..+|||||.||||||||+++
T Consensus 138 -----yP~qLSGGQKQRVaI------------------------------------ARALa~~P~iLL~DEaTSALDP~T 176 (339)
T COG1135 138 -----YPAQLSGGQKQRVAI------------------------------------ARALANNPKILLCDEATSALDPET 176 (339)
T ss_pred -----CchhcCcchhhHHHH------------------------------------HHHHhcCCCEEEecCccccCChHH
Confidence 368899999999999 999999999999999999999998
Q ss_pred HHHHHHHHH----hcCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1327 EEQLYRLAK----DMGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1327 e~~l~~~~~----~~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
-+.+.++++ +.|.|++.|+|-++.+ +++|++..+..|
T Consensus 177 T~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G 218 (339)
T COG1135 177 TQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQG 218 (339)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCC
Confidence 876665544 4699999999999877 568888888544
No 128
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.5e-38 Score=349.37 Aligned_cols=197 Identities=26% Similarity=0.370 Sum_probs=168.8
Q ss_pred EEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------ccccc
Q 000647 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKE 514 (1374)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~~~~ 514 (1374)
++++|+++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 7899999999754 5799999999999999999999999999999999999999999999998641 13567
Q ss_pred EEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 515 IFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 515 i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
++|+||+|.++. .|++||+.++...........++++.++++.+++.+..++.+ .+||||||||++|||||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~laral 153 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP--------MQLSGGEQQRVAIARAI 153 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHHHH
Confidence 999999998876 599999987532111101112456788999999998888766 58999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .+|+++++++
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~ 213 (216)
T TIGR00960 154 VHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSR 213 (216)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999888764 4899999999999886 6899999975
No 129
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4e-38 Score=368.27 Aligned_cols=198 Identities=26% Similarity=0.340 Sum_probs=171.1
Q ss_pred cEEEeeeEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------cc
Q 000647 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DL 511 (1374)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~ 511 (1374)
+|+++||++.|++ ..++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+- ..
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 3789999999963 24799999999999999999999999999999999999999999999998641 13
Q ss_pred cccEEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000647 512 NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1374)
Q Consensus 512 ~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1374)
+++|+|+||++.++. .|++||+.++............+++.++++.++|.+..++.| .+||||||||++||
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~--------~~LSgGqkQRV~IA 152 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP--------SNLSGGQKQRVAIA 152 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHH
Confidence 568999999998885 799999998753211111122356788999999999988877 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 591 Ral~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||+.+|+++|||||||+||+.+...+++.+++ .|+|+|+|||+++.+. .||++++|++
T Consensus 153 RAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~ 216 (343)
T TIGR02314 153 RALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISN 216 (343)
T ss_pred HHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999887764 3899999999999984 6999999985
No 130
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-38 Score=342.53 Aligned_cols=197 Identities=28% Similarity=0.427 Sum_probs=172.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCC---C-cc---ccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV---G-SD---LNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~---~-~~---~~~~i~ 516 (1374)
+|+++|+++.++ ...+++|+|++|+.||.+++.||||||||||||+|+|+..|++|.|.++|. | .. -.++||
T Consensus 2 ~i~i~~~~~~~~-~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VG 80 (345)
T COG1118 2 SIRINNVKKRFG-AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVG 80 (345)
T ss_pred ceeehhhhhhcc-cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhccee
Confidence 467888888774 567889999999999999999999999999999999999999999999997 4 11 237899
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCCccc--CCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEV--EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~~~~--~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
||+|+.-+|. .||.|||.||....... +.....++.+.|+.|+|+.+.+++| .+||||||||+|+||||
T Consensus 81 fvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP--------~QLSGGQrQRVALARAL 152 (345)
T COG1118 81 FVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP--------AQLSGGQRQRVALARAL 152 (345)
T ss_pred EEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc--------hhcChHHHHHHHHHHHh
Confidence 9999998876 79999999998543211 2234567889999999999999999 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
..+|++|+||||++|||.+..+.+.+.|++ .|.|+++||||.+.+ +.+|+|++|++
T Consensus 153 A~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~ 213 (345)
T COG1118 153 AVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQ 213 (345)
T ss_pred hcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecC
Confidence 999999999999999999999888776653 499999999999876 68999999986
No 131
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=9.9e-38 Score=346.34 Aligned_cols=197 Identities=29% Similarity=0.437 Sum_probs=168.0
Q ss_pred EEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-c---------c
Q 000647 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D---------L 511 (1374)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-~---------~ 511 (1374)
|+++||++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 4689999998653 6799999999999999999999999999999999999999999999998641 1 2
Q ss_pred cccEEEEecCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000647 512 NKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1374)
Q Consensus 512 ~~~i~~v~Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1374)
++.++|+||+|.++.. |++||+.++...........++++.++++.+++++..++.+ .+||||||||++||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la 152 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYP--------SELSGGQQQRVAIA 152 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcCh--------hhcCHHHHHHHHHH
Confidence 3579999999988875 99999987543211101112346788999999988877765 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 591 Ral~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
|||+++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+..+|++++|++
T Consensus 153 ~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~ 215 (218)
T cd03255 153 RALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRD 215 (218)
T ss_pred HHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeC
Confidence 999999999999999999999999999887764 37899999999998889999999975
No 132
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-38 Score=327.94 Aligned_cols=197 Identities=23% Similarity=0.310 Sum_probs=161.3
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccc---cccCCcccEE
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHID---EEAGSGCGIF 1175 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~---~~~~~r~~i~ 1175 (1374)
-|+++||+.+| +...||+|+|++|++||.+.|+|||||||||++|+|.+|-+|++|+|.+||.++. ++..+|++++
T Consensus 2 mi~i~~l~K~f-g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vG 80 (240)
T COG1126 2 MIEIKNLSKSF-GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVG 80 (240)
T ss_pred eEEEEeeeEEe-CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcC
Confidence 48999999988 4678999999999999999999999999999999999999999999999998775 3467789999
Q ss_pred EecCCCCCCCc-chHHHhccCC------ChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcc
Q 000647 1176 YVPQRPYTCLG-TLRDQIIYPL------SREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1374)
Q Consensus 1176 ~VpQ~P~Lf~G-TlR~Nl~yp~------~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt 1248 (1374)
+|.|..-||+- |+-||+.++. +.+|++.. -.+.|+.|||.+..+.
T Consensus 81 mVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~---------------------A~~lL~~VGL~~ka~~------- 132 (240)
T COG1126 81 MVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREK---------------------ALELLEKVGLADKADA------- 132 (240)
T ss_pred eecccccccccchHHHHHHhhhHHHcCCCHHHHHHH---------------------HHHHHHHcCchhhhhh-------
Confidence 99999999965 9999998653 22222222 2456888888665443
Q ss_pred ccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHH
Q 000647 1249 NLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEE 1328 (1374)
Q Consensus 1249 ~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~ 1328 (1374)
+..+||||||||+|| ||||.-+|+++|+||||||||++.-.
T Consensus 133 ---yP~qLSGGQqQRVAI------------------------------------ARALaM~P~vmLFDEPTSALDPElv~ 173 (240)
T COG1126 133 ---YPAQLSGGQQQRVAI------------------------------------ARALAMDPKVMLFDEPTSALDPELVG 173 (240)
T ss_pred ---CccccCcHHHHHHHH------------------------------------HHHHcCCCCEEeecCCcccCCHHHHH
Confidence 467899999999999 99999999999999999999999765
Q ss_pred HHHHHH---HhcCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1329 QLYRLA---KDMGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1329 ~l~~~~---~~~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
.+.+.+ ++.|.|.|+|||-....+ ..|+++-+.+|
T Consensus 174 EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G 212 (240)
T COG1126 174 EVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQG 212 (240)
T ss_pred HHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCC
Confidence 444332 347999999999886654 45666666433
No 133
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.9e-38 Score=320.83 Aligned_cols=199 Identities=25% Similarity=0.314 Sum_probs=172.8
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-----cCCcccE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-----AGSGCGI 1174 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-----~~~r~~i 1174 (1374)
|+|+||+..||.++++|+|+||+|++||.+-++|||||||||++++|.+.-.|++|+|.++|.|+..+ -.+|++|
T Consensus 2 I~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~I 81 (223)
T COG2884 2 IRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQI 81 (223)
T ss_pred eeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhee
Confidence 89999999999998899999999999999999999999999999999999999999999999999988 2579999
Q ss_pred EEecCCCCCC-CcchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1175 FYVPQRPYTC-LGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1175 ~~VpQ~P~Lf-~GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
++|.||--|. +-|+.||++||+.. ++.++ ...+.++|+.|||.+....+|
T Consensus 82 GvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i-------------------~~rV~~~L~~VgL~~k~~~lP------- 135 (223)
T COG2884 82 GVVFQDFRLLPDRTVYENVALPLRVIGKPPREI-------------------RRRVSEVLDLVGLKHKARALP------- 135 (223)
T ss_pred eeEeeeccccccchHhhhhhhhhhccCCCHHHH-------------------HHHHHHHHHHhccchhhhcCc-------
Confidence 9999999875 55999999999742 12111 234678899999988777764
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
.+||||||||+|| |||++++|++||-||||.+||+++...+
T Consensus 136 ---~~LSGGEQQRvaI------------------------------------ARAiV~~P~vLlADEPTGNLDp~~s~~i 176 (223)
T COG2884 136 ---SQLSGGEQQRVAI------------------------------------ARAIVNQPAVLLADEPTGNLDPDLSWEI 176 (223)
T ss_pred ---cccCchHHHHHHH------------------------------------HHHHccCCCeEeecCCCCCCChHHHHHH
Confidence 6799999999999 9999999999999999999999998877
Q ss_pred HHHHHh---cCceEEEecCCCCchhh-ccceEEEEcC
Q 000647 1331 YRLAKD---MGITFVTSSQRPALIPF-HSLELRLIDG 1363 (1374)
Q Consensus 1331 ~~~~~~---~~~TvI~IaHRl~~i~~-~~~~l~l~~g 1363 (1374)
.++..+ .|.|||+.||..+++.- ..+++.|.+|
T Consensus 177 m~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~G 213 (223)
T COG2884 177 MRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDG 213 (223)
T ss_pred HHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCC
Confidence 776543 69999999999988754 4566666443
No 134
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-37 Score=344.01 Aligned_cols=200 Identities=27% Similarity=0.353 Sum_probs=169.5
Q ss_pred EEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-ccccccEEEEec
Q 000647 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~~~~~~i~~v~Q 520 (1374)
++++|+++.|+++ +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 4689999999642 679999999999999999999999999999999999999999999999865 234578999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
+|.++. .|++||+.++............+++.++++.+++.+..++.+ ..||||||||++|||||+++|++
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrl~la~al~~~p~l 152 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP--------HQLSGGMRQRVALARALAVDPDV 152 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc--------ccCCHHHHHHHHHHHHHHcCCCE
Confidence 998877 699999987532111111112356788999999998888766 58999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC-CCc
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG-EGE 652 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~-~g~ 652 (1374)
+||||||++||+.+.+.+++.+++ .|+|+|+|||+++.+ ..+|++++|++ +|.
T Consensus 153 llLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 153 LLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 999999999999999999988754 378999999999876 57999999985 454
No 135
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=365.77 Aligned_cols=198 Identities=25% Similarity=0.388 Sum_probs=171.7
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----cccccEEEEe
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 519 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----~~~~~i~~v~ 519 (1374)
.++++|+++.|++++.+|+|+||++++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+. ..+++|+|||
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 489999999996567899999999999999999999999999999999999999999999998641 1246899999
Q ss_pred cCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|++.+|. .|++|||.|+............+++.++++.++|+++.++.| .+||||||||++|||||+.+|+
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGq~QRvalARAL~~~P~ 154 (356)
T PRK11650 83 QNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP--------RELSGGQRQRVAMGRAIVREPA 154 (356)
T ss_pred CCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999886 699999999854221111112356788999999999999987 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++|||||||+||+.+.+.+.+.+++ .|+|+|+|||+++.+ ..+|++++|++
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~ 210 (356)
T PRK11650 155 VFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNG 210 (356)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999998887653 489999999999866 57999999975
No 136
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-37 Score=339.98 Aligned_cols=191 Identities=30% Similarity=0.403 Sum_probs=166.2
Q ss_pred EeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC---ccccccEEEEecCC-
Q 000647 447 FSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---SDLNKEIFYVPQRP- 522 (1374)
Q Consensus 447 ~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~---~~~~~~i~~v~Q~p- 522 (1374)
++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+||+|
T Consensus 2 ~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~ 81 (205)
T cd03226 2 IENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDVD 81 (205)
T ss_pred cccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecChh
Confidence 67899988643679999999999999999999999999999999999999999999999864 22456799999998
Q ss_pred -CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000647 523 -YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 601 (1374)
Q Consensus 523 -~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ill 601 (1374)
+++..|++||+.++.... .....++.++++.+++.++.++.| ..||||||||++|||||+++|+++|
T Consensus 82 ~~~~~~tv~e~l~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~lll 149 (205)
T cd03226 82 YQLFTDSVREELLLGLKEL----DAGNEQAETVLKDLDLYALKERHP--------LSLSGGQKQRLAIAAALLSGKDLLI 149 (205)
T ss_pred hhhhhccHHHHHhhhhhhc----CccHHHHHHHHHHcCCchhcCCCc--------hhCCHHHHHHHHHHHHHHhCCCEEE
Confidence 456789999998864321 112356889999999998887766 5899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 602 LDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 602 LDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 150 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 201 (205)
T cd03226 150 FDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLAN 201 (205)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999888764 4899999999999885 6999999975
No 137
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5e-37 Score=349.81 Aligned_cols=198 Identities=22% Similarity=0.336 Sum_probs=176.3
Q ss_pred cEEEeeeEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEE
Q 000647 444 YIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~-~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~ 516 (1374)
.|+++|+++.|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++ .+|+|.++|.+ .++++.|+
T Consensus 2 ~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~ 80 (275)
T cd03289 2 QMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFG 80 (275)
T ss_pred eEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEE
Confidence 5899999999974 4679999999999999999999999999999999999998 78999999964 24567899
Q ss_pred EEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHH
Q 000647 517 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 517 ~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal 593 (1374)
|+||+|++|++|+++|+.+.. ..+++++.++++.++|.++.+++|.+.++ +.|..||||||||++||||+
T Consensus 81 ~v~q~~~lf~~tv~~nl~~~~-------~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRal 153 (275)
T cd03289 81 VIPQKVFIFSGTFRKNLDPYG-------KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSV 153 (275)
T ss_pred EECCCcccchhhHHHHhhhcc-------CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999996321 13456788999999999999998865433 45789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+++|+++||||||++||+.+.+.+.+.+++ .++|+|+||||++.+..+|+|++|++
T Consensus 154 l~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~ 211 (275)
T cd03289 154 LSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEE 211 (275)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecC
Confidence 999999999999999999999999998875 47999999999999989999999975
No 138
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-38 Score=364.81 Aligned_cols=211 Identities=20% Similarity=0.241 Sum_probs=172.4
Q ss_pred CCCCCCCCCCCEEEeeeEEeCCC-cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCC-----CCCCeEecCCC
Q 000647 1089 HKWNSTDYQDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQ 1162 (1374)
Q Consensus 1089 ~~w~~~~~~g~I~f~~V~~~yp~-~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~-----~~~G~I~idg~ 1162 (1374)
..||. .+.|+|+||++.|++ .+++|+|+||+|++||++||+||||||||||+++|.|+++ |.+|+|.+||+
T Consensus 73 ~~~~~---~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~ 149 (329)
T PRK14257 73 EDFNH---ANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGT 149 (329)
T ss_pred CCCCc---CceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCE
Confidence 35776 688999999998874 5689999999999999999999999999999999999997 46999999999
Q ss_pred ccccc----cCCcccEEEecCCCCCCCcchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCC
Q 000647 1163 HIDEE----AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRL 1235 (1374)
Q Consensus 1163 dI~~~----~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L 1235 (1374)
+|... ..+|.+++||||+|.+|++|+++||.|+... ++.+ ..++...++++.++|
T Consensus 150 ~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~------------------~~~~~~~~~l~~~~L 211 (329)
T PRK14257 150 NTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRK------------------ILEKIVEKSLKSAAL 211 (329)
T ss_pred EccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHH------------------HHHHHHHHHHHHcCC
Confidence 99742 3567789999999999999999999864210 0100 011224556777776
Q ss_pred chhhhhhccCCcccc-ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEE
Q 000647 1236 SYLLEREEVGWDANL-NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGI 1314 (1374)
Q Consensus 1236 ~~~v~~~~~Gldt~~-~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~Pkill 1314 (1374)
++. +++.+ ..+.+||||||||+|| |||++++|+|+|
T Consensus 212 ~~~-------l~~~~~~~~~~LSgGqkqRl~L------------------------------------ARAl~~~p~IlL 248 (329)
T PRK14257 212 WDE-------VKDDLDKAGNALSGGQQQRLCI------------------------------------ARAIALEPEVLL 248 (329)
T ss_pred cch-------hhhhhhCCcccCCHHHHHHHHH------------------------------------HHHHHhCCCEEE
Confidence 432 23333 3578899999999999 999999999999
Q ss_pred eeccCCCCCHHHHHHHHHHHHh--cCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1315 LDECTNATSVDVEEQLYRLAKD--MGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1315 LDEaTSaLD~~~e~~l~~~~~~--~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
||||||+||.++.+.+++.++. .++|+|+|||++.++. +.|+++.+.+|
T Consensus 249 LDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G 300 (329)
T PRK14257 249 MDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQG 300 (329)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999888876653 4799999999998865 59999999655
No 139
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3e-37 Score=311.42 Aligned_cols=194 Identities=25% Similarity=0.346 Sum_probs=169.1
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC----ccccccEEEEec
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~----~~~~~~i~~v~Q 520 (1374)
+.+++|.+.|.. .=-.++++|++||+++|+||||||||||+++|+|+..|.+|+|.++|.+ ....+-++.++|
T Consensus 2 l~L~~V~~~y~~---~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQ 78 (231)
T COG3840 2 LALDDVRFSYGH---LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQ 78 (231)
T ss_pred ccccceEEeeCc---ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhh
Confidence 567888888843 2236789999999999999999999999999999999999999999976 223567999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
+..+|. -||.+||-+|....-.......++++.++.++||..+.+|+| .+||||||||+||||+|+++-+|
T Consensus 79 EnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP--------~~LSGGqRQRvALARclvR~~Pi 150 (231)
T COG3840 79 ENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP--------GELSGGQRQRVALARCLVREQPI 150 (231)
T ss_pred ccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc--------cccCchHHHHHHHHHHHhccCCe
Confidence 999997 599999999876543334455678899999999999999999 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHH----HhcCCEEEEEccChhhHh-hccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKV----RAMGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l----~~~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++||||+|+||+..+.++...+ .+.+.|+++|||.++.+. .+|+++++++
T Consensus 151 lLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~ 205 (231)
T COG3840 151 LLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDN 205 (231)
T ss_pred EEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeC
Confidence 9999999999999998887654 457899999999998875 7899999986
No 140
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=6.8e-37 Score=324.32 Aligned_cols=166 Identities=54% Similarity=0.999 Sum_probs=153.4
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCCC
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYT 524 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~l 524 (1374)
++++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.+++. ++++|++|+|++
T Consensus 1 i~~~~~~~~~~~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----~~i~~~~q~~~~ 75 (166)
T cd03223 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----EDLLFLPQRPYL 75 (166)
T ss_pred CEEEEEEEEcCCCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----ceEEEECCCCcc
Confidence 468999999976678999999999999999999999999999999999999999999999873 579999999998
Q ss_pred CcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000647 525 AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDE 604 (1374)
Q Consensus 525 ~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDE 604 (1374)
+..|++||+.++ . ..+||||||||++||||++++|+++||||
T Consensus 76 ~~~tv~~nl~~~------------------------------~--------~~~LS~G~~~rv~laral~~~p~~lllDE 117 (166)
T cd03223 76 PLGTLREQLIYP------------------------------W--------DDVLSGGEQQRLAFARLLLHKPKFVFLDE 117 (166)
T ss_pred ccccHHHHhhcc------------------------------C--------CCCCCHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 889999999763 1 15799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCEEEEEccChhhHhhccEEEEecCCCce
Q 000647 605 CTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGEW 653 (1374)
Q Consensus 605 ptsaLD~~~~~~i~~~l~~~~~TiI~vtH~~~~~~~~d~il~l~~~g~~ 653 (1374)
||++||+++.+.+.+.+++.+.|+|++||+++....+|++++++++|+|
T Consensus 118 Pt~~LD~~~~~~l~~~l~~~~~tiiivsh~~~~~~~~d~i~~l~~~~~~ 166 (166)
T cd03223 118 ATSALDEESEDRLYQLLKELGITVISVGHRPSLWKFHDRVLDLDGEGGW 166 (166)
T ss_pred CccccCHHHHHHHHHHHHHhCCEEEEEeCChhHHhhCCEEEEEcCCCCC
Confidence 9999999999999999988889999999999988899999999988765
No 141
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-38 Score=328.14 Aligned_cols=192 Identities=24% Similarity=0.288 Sum_probs=162.7
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCC-----CeEecCCCccccc----c
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVS-----GSLTKPSQHIDEE----A 1168 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~-----G~I~idg~dI~~~----~ 1168 (1374)
..++++|++++|- .+.+|+|+|++|++++..|++|||||||||+++.|-|+.|..+ |+|.++|+||.+. .
T Consensus 6 ~~~~~~~l~~yYg-~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 6 PAIEVRDLNLYYG-DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred ceeEecceeEEEC-chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 4689999999994 6789999999999999999999999999999999999999876 9999999999875 3
Q ss_pred CCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcc
Q 000647 1169 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1374)
Q Consensus 1169 ~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt 1248 (1374)
.+|+++++|.|.|--|+.||+||+.||... ++.. + +..|+-+...|+.+.||+.+... |+.
T Consensus 85 ~lRr~vGMVFQkPnPFp~SIydNVayG~r~----------~g~~----~--~~ldeiVe~sLk~AaLWdEVKDr---L~~ 145 (253)
T COG1117 85 ELRRRVGMVFQKPNPFPMSIYDNVAYGLRL----------HGIK----D--KELDEIVESSLKKAALWDEVKDR---LHK 145 (253)
T ss_pred HHHHHheeeccCCCCCCchHHHHHHHhHHh----------hccc----h--HHHHHHHHHHHHHhHhHHHhHHH---hhC
Confidence 689999999999999999999999998531 1110 0 23566678889999999877542 332
Q ss_pred ccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHH
Q 000647 1249 NLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEE 1328 (1374)
Q Consensus 1249 ~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~ 1328 (1374)
.+..||||||||||| ||||--+|+||||||||||||+-+-.
T Consensus 146 ---sa~~LSGGQQQRLcI------------------------------------ARalAv~PeVlLmDEPtSALDPIsT~ 186 (253)
T COG1117 146 ---SALGLSGGQQQRLCI------------------------------------ARALAVKPEVLLMDEPTSALDPISTL 186 (253)
T ss_pred ---CccCCChhHHHHHHH------------------------------------HHHHhcCCcEEEecCcccccCchhHH
Confidence 245699999999999 99999999999999999999998766
Q ss_pred HHHHHHHh--cCceEEEecCCC
Q 000647 1329 QLYRLAKD--MGITFVTSSQRP 1348 (1374)
Q Consensus 1329 ~l~~~~~~--~~~TvI~IaHRl 1348 (1374)
.+.+++.+ .+.|+|+|+|.+
T Consensus 187 kIEeLi~eLk~~yTIviVTHnm 208 (253)
T COG1117 187 KIEELITELKKKYTIVIVTHNM 208 (253)
T ss_pred HHHHHHHHHHhccEEEEEeCCH
Confidence 66555543 589999999987
No 142
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.5e-37 Score=335.65 Aligned_cols=204 Identities=25% Similarity=0.319 Sum_probs=167.4
Q ss_pred EEEeeeEEeCCCc---ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc------CC
Q 000647 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GS 1170 (1374)
Q Consensus 1100 I~f~~V~~~yp~~---~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~------~~ 1170 (1374)
|+++||+..|..+ ..+|+++||+|++||.|+|+||||||||||+++|.++-.|++|+|.++|.|+..++ ..
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 5789999977653 57999999999999999999999999999999999999999999999999998772 34
Q ss_pred cccEEEecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccc
Q 000647 1171 GCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1374)
Q Consensus 1171 r~~i~~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~ 1249 (1374)
|..|+||+|+..|.+. |++|||..|.... +.. .........+.++.+||.+....
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~----------~~~------~~~~~~~~~~l~~~lgl~~~~~~-------- 137 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIA----------GKS------AGRRKRAAEELLEVLGLEDRLLK-------- 137 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHc----------CCC------hhHHHHHHHHHHHhcCChhhhcc--------
Confidence 5679999999998655 9999998664210 000 00012234566777777644331
Q ss_pred cccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHH
Q 000647 1250 LNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQ 1329 (1374)
Q Consensus 1250 ~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~ 1329 (1374)
....+||||||||+|| ||||+.+|+|++.||||+|||.++.+.
T Consensus 138 -~~p~eLSGGqqQRVAI------------------------------------ARAL~~~P~iilADEPTgnLD~~t~~~ 180 (226)
T COG1136 138 -KKPSELSGGQQQRVAI------------------------------------ARALINNPKIILADEPTGNLDSKTAKE 180 (226)
T ss_pred -CCchhcCHHHHHHHHH------------------------------------HHHHhcCCCeEEeeCccccCChHHHHH
Confidence 1246799999999999 999999999999999999999999987
Q ss_pred HHHHHH----hcCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1330 LYRLAK----DMGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1330 l~~~~~----~~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
+.++++ +.|.|+|+|||.+.+-.+.|+++.+.||+
T Consensus 181 V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 181 VLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGK 219 (226)
T ss_pred HHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCe
Confidence 766544 35899999999999999999999998886
No 143
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-37 Score=341.15 Aligned_cols=196 Identities=30% Similarity=0.440 Sum_probs=166.5
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC----ccccccEEEEec
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~----~~~~~~i~~v~Q 520 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||
T Consensus 1 l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q 79 (213)
T cd03259 1 LELKGLSKTYG-SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQ 79 (213)
T ss_pred CeeeeeEEEeC-CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcC
Confidence 46899999986 4679999999999999999999999999999999999999999999999864 123467999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
+|.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+.+|++
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrl~la~al~~~p~~ 151 (213)
T cd03259 80 DYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP--------HELSGGQQQRVALARALAREPSL 151 (213)
T ss_pred chhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 998775 699999987532111001112345778999999998888766 58999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+||||||++||+.+.+.+++.+++ .|+|+|++||+++.+ ..+|+++++++
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~ 206 (213)
T cd03259 152 LLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNE 206 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEEC
Confidence 999999999999999999988764 389999999999886 57999999975
No 144
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.1e-37 Score=340.36 Aligned_cols=197 Identities=30% Similarity=0.438 Sum_probs=168.3
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------cccccE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~~~~i 515 (1374)
++++|+++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 2 l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (214)
T TIGR02673 2 IEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRRI 81 (214)
T ss_pred EEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhhe
Confidence 78999999986456899999999999999999999999999999999999999999999998541 135679
Q ss_pred EEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 516 ~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
+|+||+|.++. .|++||+.++...........++++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~ 153 (214)
T TIGR02673 82 GVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP--------EQLSGGEQQRVAIARAIV 153 (214)
T ss_pred EEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHHHHh
Confidence 99999998876 699999987532111001112356788999999988777766 589999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 154 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~ 212 (214)
T TIGR02673 154 NSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDD 212 (214)
T ss_pred CCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecC
Confidence 99999999999999999999999888764 4899999999999886 6899999975
No 145
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-37 Score=361.43 Aligned_cols=198 Identities=26% Similarity=0.398 Sum_probs=172.4
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC----ccccccEEEE
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYV 518 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~----~~~~~~i~~v 518 (1374)
..|+++|+++.|+ +..+|+|+||++++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+ ...+++|+||
T Consensus 5 ~~l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 83 (351)
T PRK11432 5 NFVVLKNITKRFG-SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMV 83 (351)
T ss_pred cEEEEEeEEEEEC-CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 4799999999995 4679999999999999999999999999999999999999999999999864 1224689999
Q ss_pred ecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000647 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 519 ~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1374)
||++.+|. .|++|||.|+............+++.++++.+++.++.++.| .+||||||||++|||||+.+|
T Consensus 84 fQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~--------~~LSgGq~QRVaLARaL~~~P 155 (351)
T PRK11432 84 FQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV--------DQISGGQQQRVALARALILKP 155 (351)
T ss_pred eCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHHcCC
Confidence 99999886 599999999854221111123457788999999999998887 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+++|||||||+||+...+.+.+.+++ .|+|+|+|||+.+.+ ..+|+|++|++
T Consensus 156 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~ 212 (351)
T PRK11432 156 KVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNK 212 (351)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999998887753 489999999999886 67999999986
No 146
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.5e-37 Score=340.11 Aligned_cols=197 Identities=25% Similarity=0.337 Sum_probs=167.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------cccccE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~~~~i 515 (1374)
++++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.+
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 46899999997556799999999999999999999999999999999999999999999998531 134679
Q ss_pred EEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 516 ~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
+|+||+|.++. .|++||+.++...........++++.++++.+++++..++.+ .+||||||||++||||++
T Consensus 81 ~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~ 152 (214)
T cd03292 81 GVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP--------AELSGGEQQRVAIARAIV 152 (214)
T ss_pred EEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh--------hhcCHHHHHHHHHHHHHH
Confidence 99999998887 599999987532111111112346778999999998877766 589999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++|+++||||||++||+++.+.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 153 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 211 (214)
T cd03292 153 NSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALER 211 (214)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999887764 4899999999999886 5899999975
No 147
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-37 Score=345.16 Aligned_cols=196 Identities=27% Similarity=0.365 Sum_probs=166.3
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------cccccE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~~~~i 515 (1374)
++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i 79 (235)
T cd03261 1 IELRGLTKSFG-GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRM 79 (235)
T ss_pred CeEEEEEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcce
Confidence 46899999985 46799999999999999999999999999999999999999999999998541 235679
Q ss_pred EEEecCCCCCcC-CHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 516 FYVPQRPYTAVG-TLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 516 ~~v~Q~p~l~~~-Tv~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
+|+||+|.++.. |++||+.++..... .......+++.++++.+++.+..++.+ .+||||||||++|||||
T Consensus 80 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~ia~al 151 (235)
T cd03261 80 GMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYP--------AELSGGMKKRVALARAL 151 (235)
T ss_pred EEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHH
Confidence 999999988875 99999987532110 001112345678899999988777765 58999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+++|+++||||||++||+.+.+.+++.+++ .|+|+|+|||+++.+. .+|++++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~ 212 (235)
T cd03261 152 ALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYD 212 (235)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999888764 3899999999999875 6999999975
No 148
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-37 Score=351.63 Aligned_cols=198 Identities=24% Similarity=0.332 Sum_probs=170.7
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
.++++|+++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 58999999999755679999999999999999999999999999999999999999999999854 123567999
Q ss_pred EecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 518 VPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 518 v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
+||+| .++..|++||+.++............+++.++++.++|.+..++.| .+||||||||++|||||+.
T Consensus 84 v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LSgG~~qrv~laraL~~ 155 (274)
T PRK13647 84 VFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP--------YHLSYGQKKRVAIAGVLAM 155 (274)
T ss_pred EecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh--------hhCCHHHHHHHHHHHHHHc
Confidence 99998 5677899999998632111111112346788999999998888877 5899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+ +.||++++|++
T Consensus 156 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~ 213 (274)
T PRK13647 156 DPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKE 213 (274)
T ss_pred CCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999888754 489999999999987 57999999975
No 149
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7e-37 Score=338.28 Aligned_cols=194 Identities=32% Similarity=0.449 Sum_probs=165.3
Q ss_pred EeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-ccccccEEEEecCCCC-
Q 000647 447 FSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQRPYT- 524 (1374)
Q Consensus 447 ~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~~~~~~i~~v~Q~p~l- 524 (1374)
++|+++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+||+|.+
T Consensus 2 ~~~l~~~~~~-~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~~ 80 (213)
T cd03235 2 VEDLTVSYGG-HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSID 80 (213)
T ss_pred cccceeEECC-EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccccc
Confidence 6789998864 679999999999999999999999999999999999999999999999865 2345689999999976
Q ss_pred --CcCCHHHHhcCCCCCCc----ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 525 --AVGTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 525 --~~~Tv~eni~~~~~~~~----~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
+..|++||+.++..... .......+++.++++.+++.++.++.+ .+||||||||++|||||+++|+
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p~ 152 (213)
T cd03235 81 RDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI--------GELSGGQQQRVLLARALVQDPD 152 (213)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc--------ccCCHHHHHHHHHHHHHHcCCC
Confidence 45799999987643210 001112356788999999998887765 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 153 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 207 (213)
T cd03235 153 LLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNR 207 (213)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcC
Confidence 9999999999999999999887764 4789999999999875 6899999975
No 150
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=9.1e-37 Score=339.34 Aligned_cols=197 Identities=25% Similarity=0.361 Sum_probs=166.7
Q ss_pred EEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------c---cc
Q 000647 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D---LN 512 (1374)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~---~~ 512 (1374)
++++||++.|+++ +++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. + ++
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 6899999999642 4799999999999999999999999999999999999999999999998541 1 12
Q ss_pred -ccEEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000647 513 -KEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1374)
Q Consensus 513 -~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1374)
+.++|+||+|.++. .|++||+.++............+++.++++.+++++..++.+ ..||||||||++||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la 153 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRP--------SELSGGERQRVAIA 153 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHH
Confidence 57999999998875 699999987432111000112345778999999988877765 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 591 Ral~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
||++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+..+|++++|++
T Consensus 154 ral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~ 216 (221)
T TIGR02211 154 RALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKD 216 (221)
T ss_pred HHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeC
Confidence 999999999999999999999999999887753 37899999999999888999999975
No 151
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=341.46 Aligned_cols=199 Identities=24% Similarity=0.353 Sum_probs=168.4
Q ss_pred CcEEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-c--------
Q 000647 443 NYIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D-------- 510 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-~-------- 510 (1374)
+.++++||++.|+++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 368999999999753 4799999999999999999999999999999999999999999999998641 1
Q ss_pred c-cccEEEEecCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHH
Q 000647 511 L-NKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1374)
Q Consensus 511 ~-~~~i~~v~Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1374)
. ++.++|+||+|.++.. |++||+.++............+++.++++.+++.+..++.+ .+||||||||++
T Consensus 84 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgG~~qrl~ 155 (233)
T PRK11629 84 LRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRP--------SELSGGERQRVA 155 (233)
T ss_pred HHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHH
Confidence 1 2579999999988764 99999987432111001112346788999999988777765 689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 589 lARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
||||++++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+..+|++++|++
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~ 220 (233)
T PRK11629 156 IARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRD 220 (233)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEEC
Confidence 99999999999999999999999999999887754 48999999999999988899999975
No 152
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.1e-37 Score=338.26 Aligned_cols=195 Identities=29% Similarity=0.416 Sum_probs=164.0
Q ss_pred EeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEe
Q 000647 447 FSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVP 519 (1374)
Q Consensus 447 ~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~ 519 (1374)
++|+++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|+|
T Consensus 2 ~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~ 81 (211)
T cd03225 2 LKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLVF 81 (211)
T ss_pred ceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEEe
Confidence 67899988642 679999999999999999999999999999999999999999999999853 12356799999
Q ss_pred cCCC--CCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000647 520 QRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 520 Q~p~--l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1374)
|+|. ++..|++||+.++...........+.++.++++.+++.+..++.+ ..||||||||++|||||+++|
T Consensus 82 q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~laral~~~p 153 (211)
T cd03225 82 QNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSP--------FTLSGGQKQRVAIAGVLAMDP 153 (211)
T ss_pred cChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHHHHHHHHHHhcCC
Confidence 9983 567899999987532110000112345678899999988877765 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhh-ccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAF-HDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~-~d~il~l~~ 649 (1374)
+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+.. +|+++++++
T Consensus 154 ~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 154 DILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999888754 47899999999998864 999999975
No 153
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=8.7e-37 Score=338.76 Aligned_cols=197 Identities=24% Similarity=0.310 Sum_probs=167.4
Q ss_pred EEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEE
Q 000647 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIF 516 (1374)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~ 516 (1374)
++++|+++.|++. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ .++++.++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 6899999999753 179999999999999999999999999999999999999999999999864 13456899
Q ss_pred EEecCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 517 YVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 517 ~v~Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
|+||+|.++.. |++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++.
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRV--------GGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhh--------hhcCHHHHHHHHHHHHHhc
Confidence 99999988874 99999976432111001112356788999999998877755 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .+|+++.+++
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~ 211 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHR 211 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999888764 4899999999998764 7999999975
No 154
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=353.98 Aligned_cols=200 Identities=22% Similarity=0.273 Sum_probs=168.6
Q ss_pred CCcEEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC--c------
Q 000647 442 ANYIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--S------ 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~--~------ 509 (1374)
...|+++|+++.|+++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ .
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 4579999999999742 469999999999999999999999999999999999999999999999743 1
Q ss_pred --------------cccccEEEEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh-hHHhcCCCCcc
Q 000647 510 --------------DLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKE 572 (1374)
Q Consensus 510 --------------~~~~~i~~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~ 572 (1374)
.++++++||+|+| +++..|++|||.++.............++.++++.++|. ++.++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~---- 174 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSP---- 174 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCc----
Confidence 2356799999998 688889999998864211110111224567789999996 5666655
Q ss_pred ccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEec
Q 000647 573 INWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLD 648 (1374)
Q Consensus 573 ~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~ 648 (1374)
.+||||||||++|||||+++|+++||||||++||+.+++.+++.+++ .|+|+|+|||+++.+ ..||++++|+
T Consensus 175 ----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~ 250 (320)
T PRK13631 175 ----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMD 250 (320)
T ss_pred ----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 68999999999999999999999999999999999999999988753 489999999999976 5799999998
Q ss_pred C
Q 000647 649 G 649 (1374)
Q Consensus 649 ~ 649 (1374)
+
T Consensus 251 ~ 251 (320)
T PRK13631 251 K 251 (320)
T ss_pred C
Confidence 6
No 155
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=342.82 Aligned_cols=199 Identities=25% Similarity=0.325 Sum_probs=168.0
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-ccccccEEEEecCCC
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQRPY 523 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~~~~~~i~~v~Q~p~ 523 (1374)
++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ......++|+||++.
T Consensus 2 l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~ 80 (255)
T PRK11248 2 LQISHLYADYG-GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQNEG 80 (255)
T ss_pred EEEEEEEEEeC-CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCCCc
Confidence 78999999986 4679999999999999999999999999999999999999999999999864 123356999999998
Q ss_pred CCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000647 524 TAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAIL 602 (1374)
Q Consensus 524 l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illL 602 (1374)
++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+++|+++||
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qrl~laral~~~p~lllL 152 (255)
T PRK11248 81 LLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRYI--------WQLSGGQRQRVGIARALAANPQLLLL 152 (255)
T ss_pred cCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 876 699999987532111101112346788999999988777765 68999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC-CCc
Q 000647 603 DECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG-EGE 652 (1374)
Q Consensus 603 DEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~-~g~ 652 (1374)
||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||++++|++ +|.
T Consensus 153 DEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 153 DEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 999999999999999887754 3899999999999874 6999999985 343
No 156
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-36 Score=304.05 Aligned_cols=198 Identities=30% Similarity=0.393 Sum_probs=171.7
Q ss_pred cEEEeeeEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----c----c-
Q 000647 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----S----D- 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~----~- 510 (1374)
.|+++++++.-+. .-.+|++++|.|++||.++||||||||||||+-+++|+-.|++|+|.+.|++ . .
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 5778888875443 2469999999999999999999999999999999999999999999999864 1 1
Q ss_pred ccccEEEEecCCCC-CcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHH
Q 000647 511 LNKEIFYVPQRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l-~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
..+++|||+|...+ ++.|-.||+..|..-..+..........+.|+.+||.+-+..+| .+||||||||+||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP--------~qLSGGEQQRVAi 157 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYP--------AQLSGGEQQRVAL 157 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccccCc--------cccCchHHHHHHH
Confidence 24789999999864 66899999999976554333333455778999999999998888 6999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHH----HhcCCEEEEEccChhhHhhccEEEEecC
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKV----RAMGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l----~~~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
||||...|+++|-||||-+||.++.+++.+.+ ++.|.|.|+||||+.+...|+|++.+..
T Consensus 158 ARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~ 221 (228)
T COG4181 158 ARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRS 221 (228)
T ss_pred HHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeec
Confidence 99999999999999999999999999988865 4569999999999999999999999975
No 157
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.8e-36 Score=337.07 Aligned_cols=197 Identities=25% Similarity=0.337 Sum_probs=166.9
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------cccccE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~~~~i 515 (1374)
++++|+++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 81 (222)
T PRK10908 2 IRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQI 81 (222)
T ss_pred EEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhhe
Confidence 78999999996557899999999999999999999999999999999999999999999998541 135689
Q ss_pred EEEecCCCC-CcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 516 FYVPQRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 516 ~~v~Q~p~l-~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
+|+||+|.+ +..|++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~ 153 (222)
T PRK10908 82 GMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFP--------IQLSGGEQQRVGIARAVV 153 (222)
T ss_pred EEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCc--------hhCCHHHHHHHHHHHHHH
Confidence 999999986 45799999987532111101112235678899999988877765 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++.+. .+|+++++++
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (222)
T PRK10908 154 NKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSD 212 (222)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999998887764 4789999999999886 5899999975
No 158
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-36 Score=340.87 Aligned_cols=197 Identities=27% Similarity=0.390 Sum_probs=167.1
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----cccccEEEEe
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 519 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----~~~~~i~~v~ 519 (1374)
.++++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+|
T Consensus 2 ~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~ 80 (239)
T cd03296 2 SIEVRNVSKRFGD-FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVF 80 (239)
T ss_pred EEEEEeEEEEECC-EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEe
Confidence 3789999999964 6799999999999999999999999999999999999999999999998541 1245799999
Q ss_pred cCCCCCc-CCHHHHhcCCCCCCcc----cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 520 QRPYTAV-GTLRDQLIYPLTSDQE----VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 520 Q~p~l~~-~Tv~eni~~~~~~~~~----~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
|+|.++. .|++||+.++...... ......+++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 81 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~ 152 (239)
T cd03296 81 QHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP--------AQLSGGQRQRVALARALA 152 (239)
T ss_pred cCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh--------hhCCHHHHHHHHHHHHHh
Confidence 9998875 6999999876422110 00112345678899999988877765 589999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++|+++||||||++||+++.+.+.+.+++ .|+|+|++||+++.+ ..+|++++|++
T Consensus 153 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~ 212 (239)
T cd03296 153 VEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNK 212 (239)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999887764 378999999999976 56999999975
No 159
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=349.04 Aligned_cols=198 Identities=28% Similarity=0.362 Sum_probs=169.8
Q ss_pred cEEEeeeEEEcCCC--CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccE
Q 000647 444 YIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEI 515 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~--~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i 515 (1374)
.++++||++.|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 58999999999742 469999999999999999999999999999999999999999999999864 1245689
Q ss_pred EEEecCCC--CCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 516 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 516 ~~v~Q~p~--l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
+|+||+|. ++..|++|||.++...........++++.++++.++|+++.++.| .+||||||||++|||||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGq~qrv~lAral 155 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP--------ARLSGGQKQRVAIAGAV 155 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 99999983 556799999998643211111112346788999999999888876 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..+|+++++++
T Consensus 156 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~ 215 (279)
T PRK13650 156 AMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKN 215 (279)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 999999999999999999999999887753 38999999999999889999999975
No 160
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.5e-36 Score=335.77 Aligned_cols=196 Identities=24% Similarity=0.375 Sum_probs=166.0
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----cccccEEEEec
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----~~~~~i~~v~Q 520 (1374)
++++|+++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 1 i~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q 79 (213)
T cd03301 1 VELENVTKRFGN-VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQ 79 (213)
T ss_pred CEEEeeEEEECC-eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEec
Confidence 468999999864 6799999999999999999999999999999999999999999999998541 12357999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
++.++. .|++||+.++...........++++.++++.+++.+..++.+ .+||||||||++||||++++|++
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qr~~laral~~~p~l 151 (213)
T cd03301 80 NYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP--------KQLSGGQRQRVALGRAIVREPKV 151 (213)
T ss_pred ChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 998875 699999987532111111112345678899999998888766 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 206 (213)
T cd03301 152 FLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMND 206 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEEC
Confidence 999999999999999999888754 3899999999998875 6899999975
No 161
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=350.38 Aligned_cols=197 Identities=25% Similarity=0.357 Sum_probs=166.6
Q ss_pred EEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc--------ccc
Q 000647 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLN 512 (1374)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~--------~~~ 512 (1374)
++++||++.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. .++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 7899999999753 4799999999999999999999999999999999999999999999998541 235
Q ss_pred ccEEEEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh--hHHhcCCCCccccCCCCCChhHHHHHH
Q 000647 513 KEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE--YLLDRYPPEKEINWGDELSLGEQQRLG 588 (1374)
Q Consensus 513 ~~i~~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~--~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1374)
++++||||+| .++..|++||+.++............+++.++++.++|. ++.++.+ ..||||||||++
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~--------~~LSgGq~qrv~ 154 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSP--------FELSGGQKRRVA 154 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCc--------ccCCHHHHHHHH
Confidence 6899999998 567789999998753211111111234577899999997 5566655 689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 589 lARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|||||+.+|+++||||||++||+.+...+.+.+++ .|+|+|+|||+++.+ ..||+++++++
T Consensus 155 iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~ 220 (287)
T PRK13637 155 IAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNK 220 (287)
T ss_pred HHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999887753 389999999999987 57999999975
No 162
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.1e-36 Score=358.89 Aligned_cols=197 Identities=25% Similarity=0.387 Sum_probs=171.8
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC----ccccccEEEEe
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVP 519 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~----~~~~~~i~~v~ 519 (1374)
.++++|+++.|+ +..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ...++.++|||
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~ 82 (353)
T TIGR03265 4 YLSIDNIRKRFG-AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVF 82 (353)
T ss_pred EEEEEEEEEEeC-CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 589999999996 4679999999999999999999999999999999999999999999999864 11346899999
Q ss_pred cCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|++.+|. .|++||+.|+.............++.++++.++|+++.++.| .+||||||||++|||||+.+|+
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~--------~~LSgGq~QRvaLARaL~~~P~ 154 (353)
T TIGR03265 83 QSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP--------GQLSGGQQQRVALARALATSPG 154 (353)
T ss_pred CCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999886 699999999754221111122456889999999999999887 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++|||||||+||..+.+.+.+.+++ .|+|+|+|||+++.+ ..+|++++|++
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~ 210 (353)
T TIGR03265 155 LLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNH 210 (353)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999887754 489999999999976 57999999986
No 163
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2e-36 Score=341.52 Aligned_cols=197 Identities=24% Similarity=0.352 Sum_probs=167.4
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------cccccE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~~~~i 515 (1374)
++++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 2 l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (243)
T TIGR02315 2 LEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRI 81 (243)
T ss_pred eEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhhe
Confidence 68999999986356799999999999999999999999999999999999999999999998541 135679
Q ss_pred EEEecCCCCCc-CCHHHHhcCCCCCCc--------ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHH
Q 000647 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQ--------EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQR 586 (1374)
Q Consensus 516 ~~v~Q~p~l~~-~Tv~eni~~~~~~~~--------~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1374)
+|+||++.++. .|++||+.++..... ......++++.++++.+++.+..++.+ ..||||||||
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qr 153 (243)
T TIGR02315 82 GMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA--------DQLSGGQQQR 153 (243)
T ss_pred EEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHHH
Confidence 99999998776 699999987542110 001122456788899999988777755 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 587 lalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++|||||+++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+ ..+|+++++++
T Consensus 154 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 154 VAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKA 221 (243)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEEC
Confidence 9999999999999999999999999999999887754 378999999999987 57999999975
No 164
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.3e-36 Score=337.91 Aligned_cols=197 Identities=21% Similarity=0.248 Sum_probs=167.1
Q ss_pred EEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEE
Q 000647 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 518 (1374)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v 518 (1374)
|+++||++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..++++++|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 4689999999653 689999999999999999999999999999999999999999999999864 1245679999
Q ss_pred ecCCCCC-cCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000647 519 PQRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 519 ~Q~p~l~-~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1374)
||+|.++ ..|++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++.+|
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p 152 (220)
T cd03263 81 PQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRA--------RTLSGGMKRKLSLAIALIGGP 152 (220)
T ss_pred cCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChh--------hhCCHHHHHHHHHHHHHhcCC
Confidence 9999887 5799999987532111101112345778899999988777655 589999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 153 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 207 (220)
T cd03263 153 SVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSD 207 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999998865 3689999999999885 6999999975
No 165
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=340.08 Aligned_cols=192 Identities=21% Similarity=0.309 Sum_probs=169.1
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-ccccccEEEEecC
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQR 521 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~~~~~~i~~v~Q~ 521 (1374)
..|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|+||+
T Consensus 11 ~~l~i~~l~~~~~-~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q~ 89 (257)
T PRK11247 11 TPLLLNAVSKRYG-ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQD 89 (257)
T ss_pred CcEEEEEEEEEEC-CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEecC
Confidence 4699999999985 4679999999999999999999999999999999999999999999998754 3456789999999
Q ss_pred CCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000647 522 PYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFA 600 (1374)
Q Consensus 522 p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~il 600 (1374)
|.++. .|++||+.++... ..++++.++++.+++.+..++.+ .+||||||||++|||||+++|+++
T Consensus 90 ~~l~~~~tv~enl~~~~~~------~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGqkqrl~laraL~~~p~ll 155 (257)
T PRK11247 90 ARLLPWKKVIDNVGLGLKG------QWRDAALQALAAVGLADRANEWP--------AALSGGQKQRVALARALIHRPGLL 155 (257)
T ss_pred ccCCCCCcHHHHHHhcccc------hHHHHHHHHHHHcCChhHhcCCh--------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 98876 6999999876321 12456788999999988877765 689999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 601 ILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 601 lLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||||||++||+.+...+.+.+++ .++|+|+|||+++.+ ..+|+++++++
T Consensus 156 lLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~ 209 (257)
T PRK11247 156 LLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEE 209 (257)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999887753 479999999999986 57999999985
No 166
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.1e-36 Score=336.71 Aligned_cols=199 Identities=28% Similarity=0.357 Sum_probs=168.9
Q ss_pred CcEEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-c--------
Q 000647 443 NYIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D-------- 510 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-~-------- 510 (1374)
..++++|+++.|+++ .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 468999999999753 3699999999999999999999999999999999999999999999998541 1
Q ss_pred c-cccEEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHH
Q 000647 511 L-NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1374)
Q Consensus 511 ~-~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1374)
. ++.++|+||+|.++. .|+.||+.++............+++.++++.+++.+..++.| ..||||||||++
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Ge~qrl~ 156 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP--------AQLSGGEQQRVA 156 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh--------hhCCHHHHHHHH
Confidence 1 257999999998877 499999987432111111122456788999999998888766 589999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 589 lARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
|||||+++|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+..+|+++++++
T Consensus 157 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~ 221 (228)
T PRK10584 157 LARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVN 221 (228)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999887753 37899999999999888999999975
No 167
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-36 Score=352.58 Aligned_cols=206 Identities=23% Similarity=0.231 Sum_probs=169.1
Q ss_pred CCCCcEEEeeeEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc----
Q 000647 440 SEANYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS---- 509 (1374)
Q Consensus 440 ~~~~~i~~~~v~~~~~~-~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~---- 509 (1374)
+..+.|+++|+++.|++ .+++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+.
T Consensus 76 ~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 76 NHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred CcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 44568999999999964 4579999999999999999999999999999999999996 5799999998751
Q ss_pred ----cccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHH
Q 000647 510 ----DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 510 ----~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqk 584 (1374)
.+++.++||||+|+++++|++|||.|+....... +...++.+.++++.++|.+.++.. ..+.+.+||||||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~----~~~~~~~LSgGqk 231 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDD----LDKAGNALSGGQQ 231 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhh----hhCCcccCCHHHH
Confidence 3467899999999999999999999853211100 001112356778888875433211 1123579999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhh-ccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAF-HDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~-~d~il~l~~ 649 (1374)
||++||||++++|+++||||||+|||+++.+.+.+.+++ .++|+|+|||+++.+.. +|+|++|++
T Consensus 232 qRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~ 299 (329)
T PRK14257 232 QRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQ 299 (329)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999888764 37999999999999875 999999986
No 168
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=350.40 Aligned_cols=197 Identities=19% Similarity=0.266 Sum_probs=167.1
Q ss_pred EEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------------
Q 000647 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------------ 508 (1374)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------------ 508 (1374)
|+++|+++.|+++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 7899999999753 369999999999999999999999999999999999999999999997642
Q ss_pred ------------------ccccccEEEEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh-hHHhcC
Q 000647 509 ------------------SDLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRY 567 (1374)
Q Consensus 509 ------------------~~~~~~i~~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~ 567 (1374)
..+++.|+||||+| .++..|++|||.|+...........++++.++++.++|. ++.++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~ 162 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQRS 162 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCC
Confidence 12356799999987 567789999999864321111112235678899999996 677776
Q ss_pred CCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccE
Q 000647 568 PPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDV 643 (1374)
Q Consensus 568 ~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~ 643 (1374)
| .+||||||||++|||||+.+|+++||||||++||+.....+.+.+++ .|+|+|+|||+++.+ ..+|+
T Consensus 163 ~--------~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adr 234 (305)
T PRK13651 163 P--------FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKR 234 (305)
T ss_pred h--------hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCE
Confidence 6 68999999999999999999999999999999999999998887754 489999999999876 68999
Q ss_pred EEEecC
Q 000647 644 VLSLDG 649 (1374)
Q Consensus 644 il~l~~ 649 (1374)
|++|++
T Consensus 235 v~vl~~ 240 (305)
T PRK13651 235 TIFFKD 240 (305)
T ss_pred EEEEEC
Confidence 999975
No 169
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.5e-36 Score=357.24 Aligned_cols=199 Identities=26% Similarity=0.405 Sum_probs=171.9
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----cccccEEE
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFY 517 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----~~~~~i~~ 517 (1374)
...++++|+++.|+ +.++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++.++|
T Consensus 12 ~~~L~l~~l~~~~~-~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 90 (375)
T PRK09452 12 SPLVELRGISKSFD-GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNT 90 (375)
T ss_pred CceEEEEEEEEEEC-CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 34699999999985 46799999999999999999999999999999999999999999999998641 12467999
Q ss_pred EecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000647 518 VPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1374)
Q Consensus 518 v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1374)
|||++.+|. .||+|||.|+............+++.++++.++|.++.++.| .+||||||||++|||||+.+
T Consensus 91 vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p--------~~LSgGq~QRVaLARaL~~~ 162 (375)
T PRK09452 91 VFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP--------HQLSGGQQQRVAIARAVVNK 162 (375)
T ss_pred EecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHHHHHhcC
Confidence 999998886 599999999864221111112346788999999999999988 68999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 597 PKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 597 p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|+++|||||||+||....+.+.+.+++ .|+|+|+|||+++.+ ..+|+|++|++
T Consensus 163 P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~ 220 (375)
T PRK09452 163 PKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRD 220 (375)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999887753 489999999999875 57999999985
No 170
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=339.80 Aligned_cols=197 Identities=23% Similarity=0.354 Sum_probs=167.0
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------cccccE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNKEI 515 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~~~~i 515 (1374)
++++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.+
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 46899999986446799999999999999999999999999999999999999999999998641 134679
Q ss_pred EEEecCCCCCc-CCHHHHhcCCCCCC--------cccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHH
Q 000647 516 FYVPQRPYTAV-GTLRDQLIYPLTSD--------QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQR 586 (1374)
Q Consensus 516 ~~v~Q~p~l~~-~Tv~eni~~~~~~~--------~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1374)
+|+||++.++. .|++||+.++.... ........+++.++++.+++.+..++.+ .+||||||||
T Consensus 81 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qr 152 (241)
T cd03256 81 GMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA--------DQLSGGQQQR 152 (241)
T ss_pred EEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc--------ccCCHHHHHH
Confidence 99999998776 69999998753211 0001122446778899999988777655 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 587 lalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++||||++++|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 153 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~ 220 (241)
T cd03256 153 VAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKD 220 (241)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999887764 3899999999999987 7999999975
No 171
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=6e-36 Score=336.40 Aligned_cols=199 Identities=26% Similarity=0.422 Sum_probs=170.6
Q ss_pred EEEeeeEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 445 IEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 445 i~~~~v~~~~~~-~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 468999999864 3679999999999999999999999999999999999999999999999864 124567999
Q ss_pred EecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHc
Q 000647 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 518 v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~ 594 (1374)
+||+++++..|++||+.++... ....++.+.++..++.++++.+|.+... ....+||||||||++||||++
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~------~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~ 154 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPG------MSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALI 154 (237)
T ss_pred EcCCchhccchHHHHhhccCCC------CCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 9999999989999999886421 2234556677778888887776543222 235789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..+|+++++++
T Consensus 155 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~ 211 (237)
T cd03252 155 HNPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEK 211 (237)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999998865 47899999999999988999999985
No 172
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=356.40 Aligned_cols=198 Identities=27% Similarity=0.376 Sum_probs=169.1
Q ss_pred cEEEeeeEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------cc
Q 000647 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DL 511 (1374)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~ 511 (1374)
+|+++|+++.|++ ++++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ..
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 3789999999972 36799999999999999999999999999999999999999999999998641 12
Q ss_pred cccEEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000647 512 NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1374)
Q Consensus 512 ~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1374)
+++|+|+||+|.++. .|++||+.++............+++.++++.++|.+..++.| .+||||||||++||
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGq~qRv~lA 152 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYP--------AQLSGGQKQRVAIA 152 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHH
Confidence 568999999998876 699999987632111111112346778999999998888766 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 591 Ral~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||+++|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 153 raL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~ 216 (343)
T PRK11153 153 RALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDA 216 (343)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999988764 3899999999999875 6999999975
No 173
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-36 Score=334.83 Aligned_cols=200 Identities=28% Similarity=0.436 Sum_probs=173.6
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
.++++|+++.|++++++++|+||++++||+++|+||||||||||+++|+|+.+|.+|+|.++|.+ ..+++.++|
T Consensus 2 ~l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 81 (229)
T cd03254 2 EIEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGV 81 (229)
T ss_pred eEEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEE
Confidence 48899999999755679999999999999999999999999999999999999999999999854 124567999
Q ss_pred EecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHc
Q 000647 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 518 v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~ 594 (1374)
+||+|+++.+|++||+.++... ....++.++++.+++.++.+++|.+... ....+||||||||++|||||+
T Consensus 82 ~~q~~~~~~~tv~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~ 155 (229)
T cd03254 82 VLQDTFLFSGTIMENIRLGRPN------ATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAML 155 (229)
T ss_pred ecCCchhhhhHHHHHHhccCCC------CCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHh
Confidence 9999999889999999886432 2345677788889999888887643322 235789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+.+.+++.+++ .++|+|++||+++.+..+|++++|++
T Consensus 156 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~ 212 (229)
T cd03254 156 RDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDD 212 (229)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeC
Confidence 99999999999999999999999888765 47899999999999988999999975
No 174
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.8e-36 Score=357.36 Aligned_cols=198 Identities=22% Similarity=0.311 Sum_probs=171.2
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCc--cEEEeCCCCc----cccccEE
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVS--GHIAKPGVGS----DLNKEIF 516 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~--G~I~~~g~~~----~~~~~i~ 516 (1374)
+.++++||++.|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++ |+|.++|.+. ..++.|+
T Consensus 4 ~~l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig 82 (362)
T TIGR03258 4 GGIRIDHLRVAYG-ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLA 82 (362)
T ss_pred eEEEEEEEEEEEC-CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEE
Confidence 5699999999996 4679999999999999999999999999999999999999999 9999998641 1246799
Q ss_pred EEecCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 517 YVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 517 ~v~Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
||+|++.+|.. |++|||.|+...........+.++.++++.++|+++.++.| .+||||||||++|||||++
T Consensus 83 ~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~--------~~LSgGq~QRvaLARAL~~ 154 (362)
T TIGR03258 83 LLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP--------AQLSGGMQQRIAIARAIAI 154 (362)
T ss_pred EEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh--------hhCCHHHHHHHHHHHHHhc
Confidence 99999988864 99999998754221111122356788999999999999987 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh---c--CCEEEEEccChhhH-hhccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA---M--GTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~---~--~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+|+++|||||||+||+...+.+.+.+++ . |+|+|+|||+++.+ ..+|+|++|++
T Consensus 155 ~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~ 214 (362)
T TIGR03258 155 EPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKD 214 (362)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999887653 2 78999999999886 57999999985
No 175
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=348.84 Aligned_cols=198 Identities=23% Similarity=0.288 Sum_probs=167.4
Q ss_pred cEEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----------
Q 000647 444 YIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------- 509 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------- 509 (1374)
+|+++|+++.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 37899999999743 2599999999999999999999999999999999999999999999998541
Q ss_pred cccccEEEEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhHHHH
Q 000647 510 DLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQR 586 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1374)
.+++.++||+|+| .++..|+.||+.|+...........+.++.++++.++|. ++.++.| ..||||||||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~--------~~LSgGqkqr 152 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSP--------FELSGGQMRR 152 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCc--------ccCCHHHHHH
Confidence 2456899999998 678889999998864321111111234577889999995 4666655 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 587 lalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++|||||+.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+ ..||+|++|++
T Consensus 153 vaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~ 219 (288)
T PRK13643 153 VAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEK 219 (288)
T ss_pred HHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999887753 489999999999987 57999999986
No 176
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7.3e-36 Score=332.08 Aligned_cols=199 Identities=31% Similarity=0.444 Sum_probs=175.2
Q ss_pred cEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEE
Q 000647 444 YIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~ 516 (1374)
.++++|+++.|+++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (221)
T cd03244 2 DIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRIS 81 (221)
T ss_pred cEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEE
Confidence 47899999999753 579999999999999999999999999999999999999999999999854 13467899
Q ss_pred EEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHH
Q 000647 517 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 517 ~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal 593 (1374)
|+||+|.++.+|++||+.+... ...+++.++++.+++.+.++++|.+..+ .+...||||||||++||||+
T Consensus 82 ~~~q~~~l~~~tv~enl~~~~~-------~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral 154 (221)
T cd03244 82 IIPQDPVLFSGTIRSNLDPFGE-------YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARAL 154 (221)
T ss_pred EECCCCccccchHHHHhCcCCC-------CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHH
Confidence 9999999999999999975421 2356778889999999998877655433 35679999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+++|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++.+..+|+++++++
T Consensus 155 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~ 212 (221)
T cd03244 155 LRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDK 212 (221)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEEC
Confidence 999999999999999999999999998875 37899999999999988999999975
No 177
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.9e-35 Score=339.72 Aligned_cols=193 Identities=22% Similarity=0.258 Sum_probs=149.9
Q ss_pred CCEEEeeeEEeC-CCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEE
Q 000647 1098 DSISFSKLDIIT-PSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFY 1176 (1374)
Q Consensus 1098 g~I~f~~V~~~y-p~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~ 1176 (1374)
..+.|.+|+|.| |+.++.+++++++++.-+++.+||++|+||||++.++.+=..|..|.+-+.+. .+|++
T Consensus 361 p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~r---------~ri~~ 431 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHPR---------LRIKY 431 (582)
T ss_pred CeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeeccc---------ceecc
Confidence 358999999955 55558999999999999999999999999999999999988889998865543 57888
Q ss_pred ecCCCCCCCcchHHHhccCCChhHHH-HHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1177 VPQRPYTCLGTLRDQIIYPLSREEAE-LRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~GTlR~Nl~yp~~~~e~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
-.|.-+=+ +.-|.. +-+ ++++ .+...+++++..+..+||..-+... .-..
T Consensus 432 f~Qhhvd~---l~~~v~------~vd~~~~~-----------~pG~~~ee~r~hl~~~Gl~g~la~~---------si~~ 482 (582)
T KOG0062|consen 432 FAQHHVDF---LDKNVN------AVDFMEKS-----------FPGKTEEEIRRHLGSFGLSGELALQ---------SIAS 482 (582)
T ss_pred hhHhhhhH---HHHHhH------HHHHHHHh-----------CCCCCHHHHHHHHHhcCCCchhhhc---------cccc
Confidence 88876532 222211 111 1111 1223677788888776653222111 1256
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||||||=|+++ |-+...+|.+|||||||+.||.|+-.+|-+.++
T Consensus 483 LSGGQKsrvaf------------------------------------A~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~ 526 (582)
T KOG0062|consen 483 LSGGQKSRVAF------------------------------------AACTWNNPHLLVLDEPTNHLDRDSLGALAKALK 526 (582)
T ss_pred cCCcchhHHHH------------------------------------HHHhcCCCcEEEecCCCccccHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999999998888
Q ss_pred hcCceEEEecCCCCchhhccceEEEEcCCC
Q 000647 1336 DMGITFVTSSQRPALIPFHSLELRLIDGEG 1365 (1374)
Q Consensus 1336 ~~~~TvI~IaHRl~~i~~~~~~l~l~~g~g 1365 (1374)
..+--||.|+|..+.++--.+++-. ..+|
T Consensus 527 ~F~GGVv~VSHd~~fi~~~c~E~Wv-ve~g 555 (582)
T KOG0062|consen 527 NFNGGVVLVSHDEEFISSLCKELWV-VEDG 555 (582)
T ss_pred hcCCcEEEEECcHHHHhhcCceeEE-EcCC
Confidence 7788999999999999988888877 3555
No 178
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-36 Score=332.93 Aligned_cols=196 Identities=26% Similarity=0.328 Sum_probs=166.5
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC--ccccccEEEEecCC
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--SDLNKEIFYVPQRP 522 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~--~~~~~~i~~v~Q~p 522 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ...++.++|+||++
T Consensus 1 l~~~~l~~~~~-~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~~ 79 (210)
T cd03269 1 LEVENVTKRFG-RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEER 79 (210)
T ss_pred CEEEEEEEEEC-CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccCC
Confidence 46899999985 4679999999999999999999999999999999999999999999999865 23456899999999
Q ss_pred CCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000647 523 YTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 601 (1374)
Q Consensus 523 ~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ill 601 (1374)
.++. .|++||+.++...........++++.++++.+++.+..++.+ .+||||||||++||||++.+|+++|
T Consensus 80 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~~~p~~ll 151 (210)
T cd03269 80 GLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKRV--------EELSKGNQQKVQFIAAVIHDPELLI 151 (210)
T ss_pred cCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCcH--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8876 499999987432111101112356778899999988777655 5899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 602 LDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 602 LDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 152 lDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 203 (210)
T cd03269 152 LDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNK 203 (210)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeC
Confidence 9999999999999999888764 4789999999999874 6999999975
No 179
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-36 Score=336.14 Aligned_cols=196 Identities=23% Similarity=0.241 Sum_probs=166.4
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEEe
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 519 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v~ 519 (1374)
|+++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..++++++|+|
T Consensus 1 i~~~~~~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (220)
T cd03265 1 IEVENLVKKYG-DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVF 79 (220)
T ss_pred CEEEEEEEEEC-CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEec
Confidence 46899999985 4679999999999999999999999999999999999999999999999854 12356799999
Q ss_pred cCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|++.++. .|++||+.++...........++++.++++.+++.+..++.+ .+||||||||++||||++.+|+
T Consensus 80 q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qr~~la~al~~~p~ 151 (220)
T cd03265 80 QDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV--------KTYSGGMRRRLEIARSLVHRPE 151 (220)
T ss_pred CCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9998776 499999987532111001112346788999999998877766 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 152 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~ 207 (220)
T cd03265 152 VLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDH 207 (220)
T ss_pred EEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999999887754 3889999999999875 6999999975
No 180
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.7e-36 Score=331.23 Aligned_cols=192 Identities=22% Similarity=0.272 Sum_probs=167.5
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----cccccEEEEec
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----~~~~~i~~v~Q 520 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++.++|+||
T Consensus 1 l~~~~l~~~~~-~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (208)
T cd03268 1 LKTNDLTKTYG-KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIE 79 (208)
T ss_pred CEEEEEEEEEC-CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecC
Confidence 46899999985 46899999999999999999999999999999999999999999999998651 23567999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
++.++. .|++||+.++.... ..+++++.++++.+++.+..++.+ ..||||||||++||||++++|++
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p~l 147 (208)
T cd03268 80 APGFYPNLTARENLRLLARLL----GIRKKRIDEVLDVVGLKDSAKKKV--------KGFSLGMKQRLGIALALLGNPDL 147 (208)
T ss_pred CCccCccCcHHHHHHHHHHhc----CCcHHHHHHHHHHcCCHHHHhhhH--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 998774 79999998753211 123567888999999998887765 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|+++.+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~ 201 (208)
T cd03268 148 LILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINK 201 (208)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEEC
Confidence 999999999999999999887764 4899999999999885 6999999975
No 181
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-36 Score=333.30 Aligned_cols=195 Identities=25% Similarity=0.316 Sum_probs=165.9
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-----cccccEEEEe
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-----DLNKEIFYVP 519 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-----~~~~~i~~v~ 519 (1374)
|+++|+++.|+ ++++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|+|
T Consensus 1 i~~~~~~~~~~-~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 78 (211)
T cd03264 1 LQLENLTKRYG-KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLP 78 (211)
T ss_pred CEEEEEEEEEC-CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEec
Confidence 46899999985 457999999999999 9999999999999999999999999999999998641 2357899999
Q ss_pred cCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|+|.++.. |++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++++|+
T Consensus 79 q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p~ 150 (211)
T cd03264 79 QEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKI--------GSLSGGMRRRVGIAQALVGDPS 150 (211)
T ss_pred CCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCch--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 99998875 99999986422111001112346778999999998877655 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++||||||++||+.+.+.+.+.+++ .+.|+|+|||+++.+. .+|+++++++
T Consensus 151 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~ 204 (211)
T cd03264 151 ILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNK 204 (211)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999998875 3689999999999885 6999999985
No 182
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=346.27 Aligned_cols=199 Identities=22% Similarity=0.314 Sum_probs=170.0
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc--------ccccc
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKE 514 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~--------~~~~~ 514 (1374)
..|+++|+++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.
T Consensus 4 ~~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 4 YILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred ceEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 3699999999997567899999999999999999999999999999999999999999999998641 24568
Q ss_pred EEEEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000647 515 IFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1374)
Q Consensus 515 i~~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1374)
++|+||+| .++..|++||+.++............+++.++++.++|.++.++.+ .+||||||||++||||
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LS~G~~qrl~lara 155 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPT--------HCLSFGQKKRVAIAGV 155 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCc--------ccCCHHHHHHHHHHHH
Confidence 99999998 5677899999987532111111112345778899999998877765 6899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 593 l~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|+++|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~ 217 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKE 217 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999998887753 3899999999999986 7999999975
No 183
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-35 Score=325.88 Aligned_cols=191 Identities=28% Similarity=0.448 Sum_probs=166.5
Q ss_pred EEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEec
Q 000647 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q 520 (1374)
++++||++.|++. +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +|+|+||
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------~i~~~~q 73 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------SIAYVSQ 73 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------EEEEEec
Confidence 4689999999754 3799999999999999999999999999999999999999999999987 6999999
Q ss_pred CCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCC
Q 000647 521 RPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 521 ~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p 597 (1374)
+|.+++.|++||+.++... .+++..++++.+++.+.++..|.+.++ .....||+|||||++||||++.+|
T Consensus 74 ~~~l~~~t~~enl~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 74 EPWIQNGTIRENILFGKPF-------DEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred CchhccCcHHHHhccCCCc-------CHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999986431 234566788888998888877654322 345789999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHH-HH---hcCCEEEEEccChhhHhhccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAK-VR---AMGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~-l~---~~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+++||||||++||++..+.+.+. ++ +.|.|+|++||+++.+..+|++++|++
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~ 202 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDN 202 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeC
Confidence 99999999999999999888774 43 247899999999999888999999975
No 184
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-36 Score=357.48 Aligned_cols=197 Identities=21% Similarity=0.339 Sum_probs=169.2
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----cccccEEEEe
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 519 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----~~~~~i~~v~ 519 (1374)
.++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+. ..+++|+|||
T Consensus 3 ~l~i~~l~~~~~-~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~ 81 (369)
T PRK11000 3 SVTLRNVTKAYG-DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVF 81 (369)
T ss_pred EEEEEEEEEEeC-CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEe
Confidence 489999999996 46799999999999999999999999999999999999999999999998641 1246799999
Q ss_pred cCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|++.++. .|++||+.|+............+++.++++.++|.++.++.| .+||||||||++|||||+++|+
T Consensus 82 Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~--------~~LSgGq~QRvaLAraL~~~P~ 153 (369)
T PRK11000 82 QSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP--------KALSGGQRQRVAIGRTLVAEPS 153 (369)
T ss_pred CCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9998886 599999998753211111112356788999999998888877 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+ ..+|++++|++
T Consensus 154 lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~ 209 (369)
T PRK11000 154 VFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDA 209 (369)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999998877653 389999999999876 57999999985
No 185
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5e-36 Score=353.15 Aligned_cols=197 Identities=26% Similarity=0.402 Sum_probs=170.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----cccccEEEEe
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVP 519 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----~~~~~i~~v~ 519 (1374)
.|+++|+++.|+ ++.+++|+||+|++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+. ..+++++|||
T Consensus 2 ~L~i~~l~~~~~-~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~ 80 (353)
T PRK10851 2 SIEIANIKKSFG-RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVF 80 (353)
T ss_pred EEEEEEEEEEeC-CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEe
Confidence 378999999986 46799999999999999999999999999999999999999999999998641 2246799999
Q ss_pred cCCCCCc-CCHHHHhcCCCCCC----cccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 520 QRPYTAV-GTLRDQLIYPLTSD----QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 520 Q~p~l~~-~Tv~eni~~~~~~~----~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
|++.++. .|++||+.|+.... .......++++.++++.++|.++.++.| .+||||||||++|||||+
T Consensus 81 Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LSgGq~QRvalArAL~ 152 (353)
T PRK10851 81 QHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP--------AQLSGGQKQRVALARALA 152 (353)
T ss_pred cCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh--------hhCCHHHHHHHHHHHHHh
Confidence 9998886 59999999975421 0001112456788999999999888877 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+ ..+|+|++|++
T Consensus 153 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~ 212 (353)
T PRK10851 153 VEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQ 212 (353)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999998887754 389999999999986 57999999985
No 186
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.1e-35 Score=330.39 Aligned_cols=200 Identities=31% Similarity=0.509 Sum_probs=173.0
Q ss_pred cEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEE
Q 000647 444 YIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~ 516 (1374)
.++++|+++.|+++ +++++|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|.+ ...++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (220)
T cd03245 2 RIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIG 81 (220)
T ss_pred eEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEE
Confidence 47899999999653 579999999999999999999999999999999999999999999999854 12346799
Q ss_pred EEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHH
Q 000647 517 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 517 ~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal 593 (1374)
|+||+|+++..|+.||+.++... ....++.++++.+++.+..++.|.+.++ ....+||||||||++||||+
T Consensus 82 ~~~q~~~~~~~tv~e~l~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al 155 (220)
T cd03245 82 YVPQDVTLFYGTLRDNITLGAPL------ADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARAL 155 (220)
T ss_pred EeCCCCccccchHHHHhhcCCCC------CCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHH
Confidence 99999998888999999875321 1345677889999999988887643332 23468999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHhc--CCEEEEEccChhhHhhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~~--~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+.+|+++||||||++||+.+.+.+++.+++. ++|+|++||+++.+..+|+++++++
T Consensus 156 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~ 213 (220)
T cd03245 156 LNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDS 213 (220)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999988753 4799999999998889999999975
No 187
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-36 Score=344.54 Aligned_cols=198 Identities=27% Similarity=0.373 Sum_probs=170.7
Q ss_pred cEEEeeeEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEE
Q 000647 444 YIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~-~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~ 516 (1374)
.++++||++.|++ .+++++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ..+++.|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 6899999999974 4679999999999999999999999999999999999999999999999964 12456799
Q ss_pred EEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 517 YVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 517 ~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
|+||+| .++..|+.|||.++............+++.++++.++|+++.++.| ..||||||||++|||||+
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LS~G~~qrv~laral~ 156 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP--------HRLSGGQKQRVAIAGVLA 156 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc--------ccCCHHHHHHHHHHHHHH
Confidence 999998 4566899999988632211111112345788999999999888877 589999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+..+|+++++++
T Consensus 157 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~ 215 (279)
T PRK13635 157 LQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNK 215 (279)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEEC
Confidence 99999999999999999999999988764 27999999999999888999999975
No 188
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-36 Score=347.72 Aligned_cols=197 Identities=23% Similarity=0.284 Sum_probs=166.1
Q ss_pred EEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----------c
Q 000647 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------D 510 (1374)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----------~ 510 (1374)
++++|+++.|++. .++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. .
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 7899999999742 4699999999999999999999999999999999999999999999998631 2
Q ss_pred ccccEEEEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhHHHHH
Q 000647 511 LNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRL 587 (1374)
Q Consensus 511 ~~~~i~~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1374)
.++.++||||+| .++..|++||+.|+............+++.++++.++|. ++.++.| .+||||||||+
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~--------~~LSgGq~qrv 154 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSP--------FELSGGQMRRV 154 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCc--------ccCCHHHHHHH
Confidence 346799999998 577789999998863211100111124567889999996 5566655 68999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 588 alARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+|||||+.+|+++||||||++||+.+...+.+.+++ .|.|||+|||+++.+ ..+|++++|++
T Consensus 155 ~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~ 221 (290)
T PRK13634 155 AIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHK 221 (290)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999887753 389999999999987 57999999975
No 189
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-36 Score=343.83 Aligned_cols=197 Identities=25% Similarity=0.330 Sum_probs=168.7
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-------cccccEEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIFY 517 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-------~~~~~i~~ 517 (1374)
++++|+++.|++++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (274)
T PRK13644 2 IRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVGI 81 (274)
T ss_pred EEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheEE
Confidence 78999999997556799999999999999999999999999999999999999999999998641 23467999
Q ss_pred EecCCC--CCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 518 VPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 518 v~Q~p~--l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
+||+|. ++..|+.||+.++...........++++.++++.+++.+..++.+ ..||||||||++|||||++
T Consensus 82 v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~laral~~ 153 (274)
T PRK13644 82 VFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSP--------KTLSGGQGQCVALAGILTM 153 (274)
T ss_pred EEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCc--------ccCCHHHHHHHHHHHHHHc
Confidence 999985 456799999987532111001112345778899999998888765 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhhccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+|+++||||||++||+.+...+++.+++ .|.|+|++||+++.+..+|+++++++
T Consensus 154 ~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~ 210 (274)
T PRK13644 154 EPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDR 210 (274)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEEC
Confidence 9999999999999999999999887753 48999999999999989999999975
No 190
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-36 Score=355.65 Aligned_cols=199 Identities=23% Similarity=0.386 Sum_probs=171.1
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC----ccccccEEE
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFY 517 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~----~~~~~~i~~ 517 (1374)
...++++|+++.|+ +..+++|+||++++||+++|+||||||||||+|+|+|+.+|++|+|.++|.+ ...++.++|
T Consensus 17 ~~~l~l~~v~~~~~-~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~ 95 (377)
T PRK11607 17 TPLLEIRNLTKSFD-GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINM 95 (377)
T ss_pred CceEEEEeEEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 34699999999985 4679999999999999999999999999999999999999999999999864 123568999
Q ss_pred EecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000647 518 VPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1374)
Q Consensus 518 v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1374)
|||++.+|. .|+.||+.|+............+++.++++.++|.++.++.| .+||||||||++|||||+.+
T Consensus 96 vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~--------~~LSgGq~QRVaLARAL~~~ 167 (377)
T PRK11607 96 MFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP--------HQLSGGQRQRVALARSLAKR 167 (377)
T ss_pred EeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHhcC
Confidence 999999887 499999999754221111122356788999999999998887 68999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHH----hcCCEEEEEccChhhH-hhccEEEEecC
Q 000647 597 PKFAILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 597 p~illLDEptsaLD~~~~~~i~~~l~----~~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|+++|||||||+||....+.+.+.++ +.|.|+|+|||+++.+ ..+|++++|++
T Consensus 168 P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~ 225 (377)
T PRK11607 168 PKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNR 225 (377)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999988876543 4589999999999975 67999999975
No 191
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4.8e-36 Score=331.61 Aligned_cols=196 Identities=27% Similarity=0.358 Sum_probs=166.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc--------cccccEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEIF 516 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~--------~~~~~i~ 516 (1374)
++++|+++.|++ +++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++
T Consensus 1 l~~~~l~~~~~~-~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (213)
T cd03262 1 IEIKNLHKSFGD-FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVG 79 (213)
T ss_pred CEEEEEEEEECC-eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcce
Confidence 468999999864 6799999999999999999999999999999999999999999999998531 2356799
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCC-CcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~-~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
|+||+|.++. .|++||+.++... .........+++.++++.+++.+..++.+ .+||||||||++||||++
T Consensus 80 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~ 151 (213)
T cd03262 80 MVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYP--------AQLSGGQQQRVAIARALA 151 (213)
T ss_pred EEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCc--------cccCHHHHHHHHHHHHHh
Confidence 9999998876 6999999875321 11001112345778899999988888766 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 152 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~ 210 (213)
T cd03262 152 MNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDD 210 (213)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999888764 4789999999999885 6999999975
No 192
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-36 Score=343.38 Aligned_cols=199 Identities=26% Similarity=0.383 Sum_probs=170.0
Q ss_pred CcEEEeeeEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccE
Q 000647 443 NYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEI 515 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~-~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i 515 (1374)
..++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.+
T Consensus 6 ~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 6 VMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred eEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 47999999999974 5679999999999999999999999999999999999999999999999864 1346789
Q ss_pred EEEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 516 FYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 516 ~~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
+|+||+| .++..|++||+.++............+++.++++.+++.++.++.+ .+||||||||++|||||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral 157 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEP--------QNLSGGQKQRVAIASVL 157 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 9999998 4556799999987532111101112235678899999998888876 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh---c-CCEEEEEccChhhHhhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~---~-~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+.+|+++||||||++||+.+.+.+++.+++ . ++|+|++||+++.+..+|++++|++
T Consensus 158 ~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~ 217 (271)
T PRK13632 158 ALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSE 217 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEEC
Confidence 999999999999999999999999988864 2 4899999999998888999999975
No 193
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-36 Score=328.71 Aligned_cols=202 Identities=22% Similarity=0.314 Sum_probs=166.2
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEec
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~Vp 1178 (1374)
.|+++|++++|.+. +||+|+||+|++|+.++|+||||||||||++++.|+..|.+|+|.+.|.++++... +.+|+|||
T Consensus 4 ~i~v~nl~v~y~~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~-~~~IgYVP 81 (254)
T COG1121 4 MIEVENLTVSYGNR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK-RLRIGYVP 81 (254)
T ss_pred EEEEeeeEEEECCE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc-CCeEEEcC
Confidence 58999999999866 69999999999999999999999999999999999999999999999998877632 35699999
Q ss_pred CCCC---CCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1179 QRPY---TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1179 Q~P~---Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
|... -|+-|++|-+..+.... ............+++.++|+.||++++.++. -..
T Consensus 82 Q~~~~d~~fP~tV~d~V~~g~~~~------------~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~----------i~~ 139 (254)
T COG1121 82 QKSSVDRSFPITVKDVVLLGRYGK------------KGWFRRLNKKDKEKVDEALERVGMEDLRDRQ----------IGE 139 (254)
T ss_pred cccccCCCCCcCHHHHHHccCccc------------ccccccccHHHHHHHHHHHHHcCchhhhCCc----------ccc
Confidence 9663 47778888876542110 0000001112246688999999998776553 356
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
|||||+||+.| ||||..+|++|||||||+++|+.++..++++++
T Consensus 140 LSGGQ~QRV~l------------------------------------ARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~ 183 (254)
T COG1121 140 LSGGQKQRVLL------------------------------------ARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLK 183 (254)
T ss_pred cCcHHHHHHHH------------------------------------HHHhccCCCEEEecCCcccCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999999888765
Q ss_pred h---cCceEEEecCCC-CchhhccceEEE
Q 000647 1336 D---MGITFVTSSQRP-ALIPFHSLELRL 1360 (1374)
Q Consensus 1336 ~---~~~TvI~IaHRl-~~i~~~~~~l~l 1360 (1374)
+ .|+||++|+|++ ...++.|+++.|
T Consensus 184 ~l~~eg~tIl~vtHDL~~v~~~~D~vi~L 212 (254)
T COG1121 184 ELRQEGKTVLMVTHDLGLVMAYFDRVICL 212 (254)
T ss_pred HHHHCCCEEEEEeCCcHHhHhhCCEEEEE
Confidence 3 599999999999 556778888888
No 194
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-36 Score=336.47 Aligned_cols=197 Identities=29% Similarity=0.394 Sum_probs=167.5
Q ss_pred EEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------ccc
Q 000647 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLN 512 (1374)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~~ 512 (1374)
|+++|+++.|++. .++++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999643 2899999999999999999999999999999999999999999999998641 125
Q ss_pred ccEEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000647 513 KEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1374)
Q Consensus 513 ~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1374)
+.++|+||+|.++. .|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~ 153 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYP--------AQLSGGQKQRVGIAR 153 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcCh--------hhCCHHHHHHHHHHH
Confidence 67999999999886 699999987532111101112346778999999998887765 689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 592 al~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|++++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~ 216 (233)
T cd03258 154 ALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEK 216 (233)
T ss_pred HHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999887754 3899999999999875 6999999975
No 195
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.5e-36 Score=348.39 Aligned_cols=198 Identities=24% Similarity=0.294 Sum_probs=168.7
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEE
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFY 517 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~ 517 (1374)
..++++|+++.|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++|+|
T Consensus 6 ~~i~i~~l~k~~~-~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~ 84 (306)
T PRK13537 6 APIDFRNVEKRYG-DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGV 84 (306)
T ss_pred ceEEEEeEEEEEC-CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEE
Confidence 4799999999996 4679999999999999999999999999999999999999999999999865 134578999
Q ss_pred EecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000647 518 VPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1374)
Q Consensus 518 v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1374)
+||+|.++. .|++||+.|..............++.++++.+++.+..++.+ ..||||||||++|||||+++
T Consensus 85 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~aL~~~ 156 (306)
T PRK13537 85 VPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKV--------GELSGGMKRRLTLARALVND 156 (306)
T ss_pred EeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCch--------hhCCHHHHHHHHHHHHHhCC
Confidence 999998875 699999986322111100111245678899999988777654 58999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 597 PKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 597 p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|+++||||||+|||+.+.+.+.+.+++ .|+|+|++||+++.+. .||+|++|++
T Consensus 157 P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~ 213 (306)
T PRK13537 157 PDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEE 213 (306)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999888764 4899999999999885 6999999986
No 196
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=346.34 Aligned_cols=197 Identities=20% Similarity=0.305 Sum_probs=166.8
Q ss_pred EEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----------c
Q 000647 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------D 510 (1374)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----------~ 510 (1374)
++++||++.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 7899999999642 4699999999999999999999999999999999999999999999998541 2
Q ss_pred ccccEEEEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhHHHHH
Q 000647 511 LNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRL 587 (1374)
Q Consensus 511 ~~~~i~~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1374)
++++|+||||+| .++..|+.|||.++...........++++.++++.++|. +..++.+ .+||||||||+
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~--------~~LSgGq~qrv 154 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSP--------FQMSGGQMRKI 154 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCc--------ccCCHHHHHHH
Confidence 456899999998 577789999999863221111111234567889999996 5666655 68999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 588 alARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+|||||+.+|+++||||||++||+.+...+.+.+++ .|+|+|+|||+++.+ ..+|++++|++
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~ 221 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKE 221 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999887763 489999999999987 57999999975
No 197
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.3e-36 Score=336.46 Aligned_cols=196 Identities=26% Similarity=0.362 Sum_probs=165.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-----cccccEEEEe
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-----DLNKEIFYVP 519 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-----~~~~~i~~v~ 519 (1374)
++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ...+.++|+|
T Consensus 2 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 2 LEVAGLSFAYG-ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred EEEEeeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 68999999986 46799999999999999999999999999999999999999999999998541 1235799999
Q ss_pred cCCCC-CcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l-~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|++.+ +..|++||+.++............+++.++++.+++.+..++.+ .+||||||||++||||++++|+
T Consensus 81 q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrl~laral~~~p~ 152 (236)
T TIGR03864 81 QQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKV--------RELNGGHRRRVEIARALLHRPA 152 (236)
T ss_pred CCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 99987 45799999987532111001112345678899999987776654 5899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+..+|++++|++
T Consensus 153 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~ 207 (236)
T TIGR03864 153 LLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHR 207 (236)
T ss_pred EEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeC
Confidence 9999999999999999999887753 37999999999999888999999975
No 198
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.3e-36 Score=337.40 Aligned_cols=196 Identities=28% Similarity=0.407 Sum_probs=165.4
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------c-ccccEEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIFY 517 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~-~~~~i~~ 517 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .+..++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (236)
T cd03219 1 LEVRGLTKRFG-GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGR 79 (236)
T ss_pred CeeeeeEEEEC-CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEE
Confidence 46889999986 46799999999999999999999999999999999999999999999998641 1 2356999
Q ss_pred EecCCCCCcC-CHHHHhcCCCCCCccc----------CCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHH
Q 000647 518 VPQRPYTAVG-TLRDQLIYPLTSDQEV----------EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQR 586 (1374)
Q Consensus 518 v~Q~p~l~~~-Tv~eni~~~~~~~~~~----------~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1374)
+||+|.++.+ |++||+.++....... .....+++.++++.+++.+..++.+ .+||||||||
T Consensus 80 v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qr 151 (236)
T cd03219 80 TFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA--------GELSYGQQRR 151 (236)
T ss_pred EecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh--------hhCCHHHHHH
Confidence 9999988875 9999998754221100 0112345678899999987777655 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 587 lalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++||||++.+|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 152 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 152 LEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999888764 5899999999999885 6999999975
No 199
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=8.4e-36 Score=332.24 Aligned_cols=199 Identities=24% Similarity=0.377 Sum_probs=169.3
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------cccccEE
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIF 516 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~~~~~i~ 516 (1374)
..|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. .+++.++
T Consensus 6 ~~i~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 6 PLLQLQNVGYLAG-DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred ceEEEeccEEeeC-CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 4699999999985 46799999999999999999999999999999999999999999999998531 2356899
Q ss_pred EEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 517 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 517 ~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
|+||+|+++..|++||+.++..... ....+.++.++++.+++. ...++.+ .+||||||||++||||+++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRN--QQPDPAIFLDDLERFALPDTILTKNI--------AELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcC--CChHHHHHHHHHHHcCCChHHhcCCc--------ccCCHHHHHHHHHHHHHhc
Confidence 9999999988899999987432111 111234577899999995 4555544 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecCCCc
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDGEGE 652 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~~g~ 652 (1374)
+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..+|++++++++++
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~ 215 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAG 215 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccc
Confidence 9999999999999999999998887754 38899999999999989999999975443
No 200
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=333.32 Aligned_cols=199 Identities=30% Similarity=0.463 Sum_probs=172.2
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYV 518 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v 518 (1374)
++++|+++.|++++.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 80 (236)
T cd03253 1 IEFENVTFAYDPGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVV 80 (236)
T ss_pred CEEEEEEEEeCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEE
Confidence 4689999999766779999999999999999999999999999999999999999999999854 1235679999
Q ss_pred ecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHcc
Q 000647 519 PQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 519 ~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~ 595 (1374)
||+|+++..|++||+.++... ..+.++.+.++.+++.+..+.+|.+..+ .+...||||||||++|||||++
T Consensus 81 ~q~~~~~~~tv~~nl~~~~~~------~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~ 154 (236)
T cd03253 81 PQDTVLFNDTIGYNIRYGRPD------ATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILK 154 (236)
T ss_pred CCCChhhcchHHHHHhhcCCC------CCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 999999999999999886432 2344566778888998888877644322 3467899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+..||+++++++
T Consensus 155 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~ 210 (236)
T cd03253 155 NPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKD 210 (236)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEEC
Confidence 9999999999999999999999888764 27899999999999988999999975
No 201
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.3e-36 Score=328.82 Aligned_cols=194 Identities=23% Similarity=0.328 Sum_probs=164.5
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC----ccccccEEEEec
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~----~~~~~~i~~v~Q 520 (1374)
|+++|+++.|++ +. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||
T Consensus 1 i~~~~l~~~~~~-~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 77 (211)
T cd03298 1 VRLDKIRFSYGE-QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQ 77 (211)
T ss_pred CEEEeEEEEeCC-Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEec
Confidence 468999999863 33 39999999999999999999999999999999999999999999854 112457999999
Q ss_pred CCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
+|.++.+ |++||+.++...........++++.++++.+++.+..++.| .+||||||||++||||++.+|++
T Consensus 78 ~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~ia~al~~~p~l 149 (211)
T cd03298 78 ENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP--------GELSGGERQRVALARVLVRDKPV 149 (211)
T ss_pred ccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc--------ccCCHHHHHHHHHHHHHhcCCCE
Confidence 9998875 99999987643111111123456788999999998888776 58999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+||||||++||+++.+.+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 150 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 204 (211)
T cd03298 150 LLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDN 204 (211)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEEC
Confidence 999999999999999999887763 3899999999999885 6999999985
No 202
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=6.3e-36 Score=333.97 Aligned_cols=198 Identities=24% Similarity=0.293 Sum_probs=166.1
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCC-----cCCccEEEeCCCC-c-------cc
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW-----PLVSGHIAKPGVG-S-------DL 511 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~-----~~~~G~I~~~g~~-~-------~~ 511 (1374)
|+++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.+ . .+
T Consensus 1 i~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (227)
T cd03260 1 IELRDLNVYYG-DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLEL 79 (227)
T ss_pred CEEEEEEEEcC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHH
Confidence 46899999985 467999999999999999999999999999999999999 9999999999864 1 13
Q ss_pred cccEEEEecCCCCCcCCHHHHhcCCCCCCcccC-CCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000647 512 NKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE-PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1374)
Q Consensus 512 ~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~-~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1374)
+++++|+||++.++..|++||+.++........ ...++++.++++.+++.+..++.+. ..+||||||||++||
T Consensus 80 ~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~------~~~LSgG~~qrv~la 153 (227)
T cd03260 80 RRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH------ALGLSGGQQQRLCLA 153 (227)
T ss_pred HhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC------cccCCHHHHHHHHHH
Confidence 467999999998887899999987643211100 0123567788999999877665420 258999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhc--CCEEEEEccChhhHh-hccEEEEecC
Q 000647 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 591 Ral~~~p~illLDEptsaLD~~~~~~i~~~l~~~--~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||++++|+++||||||++||+.+.+.+.+.+++. .+|+|++||+++.+. .+|+++++++
T Consensus 154 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 215 (227)
T cd03260 154 RALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLN 215 (227)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999888652 379999999999865 7999999975
No 203
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.5e-36 Score=353.66 Aligned_cols=186 Identities=28% Similarity=0.330 Sum_probs=161.0
Q ss_pred CCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccc----cccEEEEecCCCCC
Q 000647 456 TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDL----NKEIFYVPQRPYTA 525 (1374)
Q Consensus 456 ~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~----~~~i~~v~Q~p~l~ 525 (1374)
+++.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ .++ +++++||||++.+|
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~ 83 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALF 83 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCC
Confidence 45679999999999999999999999999999999999999999999999964 122 56899999999998
Q ss_pred c-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000647 526 V-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDE 604 (1374)
Q Consensus 526 ~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDE 604 (1374)
+ .|++|||.++............+++.++++.++|+++.++.| .+||||||||++|||||+++|+++||||
T Consensus 84 ~~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p--------~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 84 PHMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP--------DELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 7 599999998643211111123456788999999999999887 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 605 CTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 605 ptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||||||+.+.+.+++.+.+ .|+|+|+|||+++.+ +.+|+|++|++
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~ 205 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKA 205 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 9999999999999887653 389999999999875 67999999975
No 204
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-35 Score=353.48 Aligned_cols=197 Identities=23% Similarity=0.324 Sum_probs=170.8
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
.|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+ .+++++|+|
T Consensus 3 ~L~~~nls~~y~-~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 3 MIDVSDLSVEFG-DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred eEEEeeEEEEEC-CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 589999999996 5789999999999999999999999999999999999999999999999854 234678999
Q ss_pred EecCCCC-CcCCHHHHhcCCCCCCc-cc---CCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000647 518 VPQRPYT-AVGTLRDQLIYPLTSDQ-EV---EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1374)
Q Consensus 518 v~Q~p~l-~~~Tv~eni~~~~~~~~-~~---~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1374)
|||++.+ +..|++||+.++..... .. ...+.+++.++++.+++.++.++.+ .+||||||||++||||
T Consensus 82 v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~--------~~LSgGerQRv~IArA 153 (402)
T PRK09536 82 VPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV--------TSLSGGERQRVLLARA 153 (402)
T ss_pred EccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHH
Confidence 9999987 56799999988642110 00 1123456789999999999888765 6899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 593 l~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|+++|+++||||||++||+.+...+++.+++ .|+|+|++||+++.+ +.||++++|++
T Consensus 154 L~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~ 214 (402)
T PRK09536 154 LAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLAD 214 (402)
T ss_pred HHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999998887764 488999999999998 57999999986
No 205
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=333.37 Aligned_cols=193 Identities=30% Similarity=0.370 Sum_probs=167.6
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~ 81 (241)
T PRK14250 3 EIEFKEVSYSSF-GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGM 81 (241)
T ss_pred eEEEEeEEEEeC-CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEE
Confidence 488999999985 4679999999999999999999999999999999999999999999999854 134568999
Q ss_pred EecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000647 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1374)
Q Consensus 518 v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1374)
+||+|.++..|++||+.++..... ....++.++++.+++. ++.++.+ .+||||||||++||||++++
T Consensus 82 ~~q~~~~~~~tv~e~l~~~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 82 VFQQPHLFEGTVKDNIEYGPMLKG----EKNVDVEYYLSIVGLNKEYATRDV--------KNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EecCchhchhhHHHHHhcchhhcC----cHHHHHHHHHHHcCCCHHHhhCCc--------ccCCHHHHHHHHHHHHHhcC
Confidence 999999988999999987543211 1245677889999996 5666654 68999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 597 PKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 597 p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~ 207 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNK 207 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeC
Confidence 999999999999999999999887754 3899999999999875 6999999985
No 206
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6.9e-36 Score=334.79 Aligned_cols=196 Identities=22% Similarity=0.287 Sum_probs=164.9
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------c-ccccEEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIFY 517 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~-~~~~i~~ 517 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (232)
T cd03218 1 LRAENLSKRYG-KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGY 79 (232)
T ss_pred CeEEEEEEEeC-CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEE
Confidence 46899999986 46799999999999999999999999999999999999999999999998641 1 2356999
Q ss_pred EecCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000647 518 VPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1374)
Q Consensus 518 v~Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1374)
+||++.++.+ |++||+.++.............++.++++.+++.+..++.+ ..||||||||++||||++++
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~~~ 151 (232)
T cd03218 80 LPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKA--------SSLSGGERRRVEIARALATN 151 (232)
T ss_pred ecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHHHHhcC
Confidence 9999988875 99999987532111101112345678899999988777655 68999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 597 PKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 597 p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|+++||||||++||+.+.+.+++.+++ .++|+|++||+++.+ ..+|+++++++
T Consensus 152 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 152 PKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999887754 488999999999765 57999999975
No 207
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-36 Score=341.88 Aligned_cols=198 Identities=25% Similarity=0.332 Sum_probs=168.8
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
.++++|+++.|++++.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 3 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 3 LIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred eEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 48899999999755679999999999999999999999999999999999999999999999864 124467999
Q ss_pred EecCCC--CCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 518 VPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 518 v~Q~p~--l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
+||+|. ++..|+.||+.++...........++++.++++.+++.+..++.+ ..||||||||++|||||++
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Gq~qrl~laraL~~ 154 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP--------HHLSGGEKKRVAIAGVIAM 154 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc--------ccCCHHHHHHHHHHHHHHc
Confidence 999983 667899999987532111111112345778999999998888876 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ +.+|+++++++
T Consensus 155 ~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~ 213 (277)
T PRK13652 155 EPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDK 213 (277)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999887753 389999999999988 58999999975
No 208
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-36 Score=336.50 Aligned_cols=197 Identities=27% Similarity=0.381 Sum_probs=165.6
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYV 518 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v 518 (1374)
++++||++.|++.+++++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 4689999998643679999999999999999999999999999999999999999999999864 1235679999
Q ss_pred ecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChh--HHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY--LLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 519 ~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~--~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
||+|.++. .|++||+.++............+++.++++.+++.+ +.++.+ .+||||||||++||||+++
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~--------~~LS~G~~qrv~laral~~ 152 (242)
T cd03295 81 IQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYP--------HELSGGQQQRVGVARALAA 152 (242)
T ss_pred ccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcCh--------hhCCHHHHHHHHHHHHHhc
Confidence 99998886 699999987532111101112346778899999985 666654 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|++++|++
T Consensus 153 ~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~ 211 (242)
T cd03295 153 DPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKN 211 (242)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999887764 389999999999976 57999999985
No 209
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.3e-35 Score=331.84 Aligned_cols=197 Identities=31% Similarity=0.425 Sum_probs=161.8
Q ss_pred EEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------ccc
Q 000647 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLN 512 (1374)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~~ 512 (1374)
++++||++.|++. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .++
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 6899999999654 2799999999999999999999999999999999999999999999998541 235
Q ss_pred ccEEEEecCC--CCC-cCCHHHHhcCCCCCCcccC-CCCHHH-HHHHHHHcCCh-hHHhcCCCCccccCCCCCChhHHHH
Q 000647 513 KEIFYVPQRP--YTA-VGTLRDQLIYPLTSDQEVE-PLTHGG-MVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQR 586 (1374)
Q Consensus 513 ~~i~~v~Q~p--~l~-~~Tv~eni~~~~~~~~~~~-~~~~~~-~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1374)
+.++|+||+| .++ ..|++||+.++........ .....+ ..++++.+++. +..++.+ .+||||||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~~qr 153 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYP--------HELSGGQRQR 153 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCc--------hhcCHHHHHH
Confidence 6899999999 344 4799999976422110000 001112 24678888984 5666655 5899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---c-CCEEEEEccChhhHh-hccEEEEecC
Q 000647 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 587 lalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~-~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++||||++++|+++||||||++||+.+.+.+++.+++ . |+|+|++||+++.+. .+|++++|++
T Consensus 154 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 221 (228)
T cd03257 154 VAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYA 221 (228)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeC
Confidence 9999999999999999999999999999999888754 2 899999999999886 7999999985
No 210
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.9e-36 Score=343.50 Aligned_cols=198 Identities=28% Similarity=0.374 Sum_probs=169.4
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 518 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v 518 (1374)
.++++|+++.|.+++.+|+|+||+|++|++++++||||||||||+|+|+|+.+|++|+|.++|.+ .+.++++||+
T Consensus 4 ~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~ 83 (293)
T COG1131 4 VIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYV 83 (293)
T ss_pred eeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEEE
Confidence 47889999999646889999999999999999999999999999999999999999999999965 2456789999
Q ss_pred ecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000647 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 519 ~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1374)
||+|.++. .|++||+.|-...........++++.++++.++|.+..++.. ..||+|||||++||+||+++|
T Consensus 84 ~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~lS~G~kqrl~ia~aL~~~P 155 (293)
T COG1131 84 PQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKANKKV--------RTLSGGMKQRLSIALALLHDP 155 (293)
T ss_pred ccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhCcch--------hhcCHHHHHHHHHHHHHhcCC
Confidence 99998765 599999987433221111123567899999999998443322 589999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHh---cC-CEEEEEccChhhHhh-ccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAKVRA---MG-TSCITISHRPALVAF-HDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~l~~---~~-~TiI~vtH~~~~~~~-~d~il~l~~ 649 (1374)
+++||||||+|||+.+...+.+.+++ .| +||+++||.++.+.. ||+|+++++
T Consensus 156 ~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~ 212 (293)
T COG1131 156 ELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILND 212 (293)
T ss_pred CEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeC
Confidence 99999999999999999999988764 35 899999999998865 999999986
No 211
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=9.1e-36 Score=346.28 Aligned_cols=197 Identities=25% Similarity=0.282 Sum_probs=166.6
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 518 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v 518 (1374)
.|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+
T Consensus 4 ~i~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v 82 (303)
T TIGR01288 4 AIDLVGVSKSYG-DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVV 82 (303)
T ss_pred EEEEEeEEEEeC-CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEE
Confidence 589999999985 4679999999999999999999999999999999999999999999999864 1245789999
Q ss_pred ecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000647 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 519 ~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1374)
||++.++. .|++||+.+.............+++.++++.+++.+..++.+ ..||||||||++|||||+++|
T Consensus 83 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p 154 (303)
T TIGR01288 83 PQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRV--------ALLSGGMKRRLTLARALINDP 154 (303)
T ss_pred eccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCch--------hhCCHHHHHHHHHHHHHhcCC
Confidence 99998875 699999975321111000111235667899999988777755 589999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 155 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~ 210 (303)
T TIGR01288 155 QLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLES 210 (303)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999888764 4899999999999885 7999999975
No 212
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=6.3e-36 Score=328.93 Aligned_cols=192 Identities=25% Similarity=0.330 Sum_probs=163.0
Q ss_pred EeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----------cccccEE
Q 000647 447 FSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEIF 516 (1374)
Q Consensus 447 ~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----------~~~~~i~ 516 (1374)
++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+- ..++.++
T Consensus 1 i~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~ 79 (206)
T TIGR03608 1 LKNISKKFG-DKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLG 79 (206)
T ss_pred CcceEEEEC-CEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCee
Confidence 368889886 46799999999999999999999999999999999999999999999998641 1346799
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
|++|+|.++. .|++||+.++............+++.++++.+++++..++.+ .+||||||||++|||||++
T Consensus 80 ~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qr~~laral~~ 151 (206)
T TIGR03608 80 YLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQKI--------YELSGGEQQRVALARAILK 151 (206)
T ss_pred EEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCCh--------hhCCHHHHHHHHHHHHHHc
Confidence 9999998886 699999987432111111112456788999999988777755 5899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhhccEEEEe
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSL 647 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~~d~il~l 647 (1374)
+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++....+|++++|
T Consensus 152 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 152 DPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred CCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999988765 489999999999988889999875
No 213
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=340.75 Aligned_cols=199 Identities=22% Similarity=0.303 Sum_probs=170.4
Q ss_pred CcEEEeeeEEEcCC-----CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-------c
Q 000647 443 NYIEFSGVKVVTPT-----GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------D 510 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~-----~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-------~ 510 (1374)
+.++++|+++.|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 36899999999974 25799999999999999999999999999999999999999999999998541 2
Q ss_pred ccccEEEEecCCC--CCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHH
Q 000647 511 LNKEIFYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~--l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1374)
+++.++|+||+|. ++..|+.+|+.|+...........++++.++++.++|.++.++.+ .+||||||||++
T Consensus 83 ~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LS~G~~qrv~ 154 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP--------HLLSGGQKQRVA 154 (280)
T ss_pred HhhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc--------ccCCHHHHHHHH
Confidence 3568999999984 555689999988632211111112456788999999999888876 689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 589 lARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
|||||+++|+++||||||++||+.+...+.+.+++ .|.|+|++||+++.+..+|+++++++
T Consensus 155 laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~ 219 (280)
T PRK13633 155 IAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDS 219 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEEC
Confidence 99999999999999999999999999999887754 38999999999999888999999975
No 214
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-35 Score=329.64 Aligned_cols=199 Identities=26% Similarity=0.420 Sum_probs=170.6
Q ss_pred EEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
++++|+++.|++. +++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ..+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4689999998653 379999999999999999999999999999999999999999999999854 123567999
Q ss_pred EecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHc
Q 000647 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 518 v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~ 594 (1374)
+||+|+++..|++||+.++... ....++.+.++.+++.++++.+|.+... .....||||||||++|||||+
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~ 154 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPG------ATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALL 154 (234)
T ss_pred eCCCCeeccccHHHHhhccCCC------CCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHh
Confidence 9999999989999999886432 1334566677788888888776533221 245789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++.+..+|+++++++
T Consensus 155 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~ 211 (234)
T cd03251 155 KDPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLED 211 (234)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecC
Confidence 99999999999999999999999998865 48899999999999988999999986
No 215
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-35 Score=330.83 Aligned_cols=208 Identities=26% Similarity=0.313 Sum_probs=181.1
Q ss_pred CCEEEeeeEEeCCC-cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccE
Q 000647 1098 DSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 1174 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~-~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i 1174 (1374)
|.|+++|+++.|+. .+.+++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...++++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56899999999986 46899999999999999999999999999999999999999999999999988764 2456789
Q ss_pred EEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-cc
Q 000647 1175 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WE 1253 (1374)
Q Consensus 1175 ~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~-~g 1253 (1374)
+|+||+|.+|++|++||+.+... ...+++.++++.+++.+.+.++|.|+++..+ +.
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~-----------------------~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 137 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGE-----------------------YSDEELWQALERVGLKEFVESLPGGLDTVVEEGG 137 (221)
T ss_pred EEECCCCccccchHHHHhCcCCC-----------------------CCHHHHHHHHHHhCcHHHHHhcccccccccccCC
Confidence 99999999999999999964211 1133456677888888888888899998864 67
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||+|||||++| ||||+++|+++||||||++||+++.+.+.+.
T Consensus 138 ~~LS~G~~qr~~l------------------------------------aral~~~p~llllDEP~~~LD~~~~~~l~~~ 181 (221)
T cd03244 138 ENLSVGQRQLLCL------------------------------------ARALLRKSKILVLDEATASVDPETDALIQKT 181 (221)
T ss_pred CcCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCccccCCHHHHHHHHHH
Confidence 8999999999999 9999999999999999999999999888877
Q ss_pred HHh--cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1334 AKD--MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1334 ~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
+++ .+.|+|+++|+++.+...++++.+.+|+
T Consensus 182 l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~ 214 (221)
T cd03244 182 IREAFKDCTVLTIAHRLDTIIDSDRILVLDKGR 214 (221)
T ss_pred HHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCe
Confidence 654 4789999999998888889999996553
No 216
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-36 Score=341.64 Aligned_cols=201 Identities=22% Similarity=0.306 Sum_probs=173.3
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEec
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~Vp 1178 (1374)
.|+++||+..|.+.. +++|+||+|+.||.+.++|||||||||++++++||.+|++|+|.|||.|++++.-..+.|++|+
T Consensus 3 ~i~l~~v~K~yg~~~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVF 81 (338)
T COG3839 3 ELELKNVRKSFGSFE-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVF 81 (338)
T ss_pred EEEEeeeEEEcCCce-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEe
Confidence 589999999997655 9999999999999999999999999999999999999999999999999999865556899999
Q ss_pred CCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|++-||+- |++|||.||+... +. .-+.-+.++.++.+.++|.+++++.| .+||
T Consensus 82 Q~yALyPhmtV~~Niaf~Lk~~----------~~------~k~ei~~rV~eva~~L~l~~lL~r~P----------~~LS 135 (338)
T COG3839 82 QNYALYPHMTVYENIAFGLKLR----------GV------PKAEIDKRVKEVAKLLGLEHLLNRKP----------LQLS 135 (338)
T ss_pred CCccccCCCcHHHHhhhhhhhC----------CC------chHHHHHHHHHHHHHcCChhHHhcCc----------ccCC
Confidence 99999876 9999999997521 00 00012456788889999999998875 5689
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH---
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA--- 1334 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~--- 1334 (1374)
||||||+|| ||||+|+|+++|||||.|+||......+...+
T Consensus 136 GGQrQRVAl------------------------------------aRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~l 179 (338)
T COG3839 136 GGQRQRVAL------------------------------------ARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKL 179 (338)
T ss_pred hhhHHHHHH------------------------------------HHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHH
Confidence 999999999 99999999999999999999999876654433
Q ss_pred -HhcCceEEEecCCC-CchhhccceEEEEc
Q 000647 1335 -KDMGITFVTSSQRP-ALIPFHSLELRLID 1362 (1374)
Q Consensus 1335 -~~~~~TvI~IaHRl-~~i~~~~~~l~l~~ 1362 (1374)
++.+.|+|.|||+. +.+-..|++..+.+
T Consensus 180 h~~l~~T~IYVTHDq~EAmtladri~Vm~~ 209 (338)
T COG3839 180 HERLGTTTIYVTHDQVEAMTLADRIVVMND 209 (338)
T ss_pred HHhcCCcEEEEcCCHHHHHhhCCEEEEEeC
Confidence 34699999999997 88889999999953
No 217
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=341.92 Aligned_cols=198 Identities=26% Similarity=0.352 Sum_probs=166.0
Q ss_pred cEEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----------
Q 000647 444 YIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------- 509 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------- 509 (1374)
.++++|+++.|+++ +++++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 37899999999642 4699999999999999999999999999999999999999999999998641
Q ss_pred cccccEEEEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhHHHH
Q 000647 510 DLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQR 586 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1374)
..++.++|+||+| .++..|++||+.++............+++.++++.++|. ++.++.+ .+||||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~--------~~LSgGq~qr 153 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSP--------FELSGGQMRR 153 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCc--------ccCCHHHHHH
Confidence 1345799999998 466789999998753211110111234567889999997 5667655 6899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 587 lalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+ ..||++++|++
T Consensus 154 l~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~ 220 (287)
T PRK13641 154 VAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEH 220 (287)
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999998887764 489999999999987 57999999975
No 218
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.8e-35 Score=329.17 Aligned_cols=194 Identities=22% Similarity=0.342 Sum_probs=162.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------c-ccccEEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIFY 517 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~-~~~~i~~ 517 (1374)
|+++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. + .++.++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (222)
T cd03224 1 LEVENLNAGYG-KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGY 79 (222)
T ss_pred CEEeeEEeecC-CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEE
Confidence 46899999986 46799999999999999999999999999999999999999999999998541 1 2457999
Q ss_pred EecCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHc-CChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 518 VPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNV-DLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 518 v~Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~-~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
+||++.++.. |++||+.++..... .....+++.++++.+ ++.+..++.+ .+||||||||++||||+++
T Consensus 80 ~~q~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~ 149 (222)
T cd03224 80 VPEGRRIFPELTVEENLLLGAYARR--RAKRKARLERVYELFPRLKERRKQLA--------GTLSGGEQQMLAIARALMS 149 (222)
T ss_pred eccccccCCCCcHHHHHHHHhhhcC--chhHHHHHHHHHHHHHhhhhhhhCch--------hhCCHHHHHHHHHHHHHhc
Confidence 9999988875 99999987643211 111234456677777 4666666544 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+|+++||||||++||+.+.+.+++.+++ .++|+|++||+++.+ ..+|+++++++
T Consensus 150 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (222)
T cd03224 150 RPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLER 207 (222)
T ss_pred CCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeC
Confidence 9999999999999999999999988764 478999999999986 56999999975
No 219
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8e-36 Score=321.53 Aligned_cols=201 Identities=21% Similarity=0.248 Sum_probs=167.2
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEec
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~Vp 1178 (1374)
.+++++|+..|++ ..||+|+||+|++||.|+|+||||||||||++++.||..|++|+|.++|..+... ...++||+
T Consensus 3 ~l~i~~v~~~f~~-~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p---~~~~~~vF 78 (248)
T COG1116 3 LLEIEGVSKSFGG-VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP---GPDIGYVF 78 (248)
T ss_pred eEEEEeeEEEeCc-eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC---CCCEEEEe
Confidence 4789999999976 7899999999999999999999999999999999999999999999999977433 34689999
Q ss_pred CCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|++.||+= |+++|+.+|+..... ......+...+.|+.|||..+-++ |..+||
T Consensus 79 Q~~~LlPW~Tv~~NV~l~l~~~~~----------------~~~e~~~~a~~~L~~VgL~~~~~~----------~P~qLS 132 (248)
T COG1116 79 QEDALLPWLTVLDNVALGLELRGK----------------SKAEARERAKELLELVGLAGFEDK----------YPHQLS 132 (248)
T ss_pred ccCcccchhhHHhhheehhhcccc----------------chHhHHHHHHHHHHHcCCcchhhc----------CccccC
Confidence 99999875 999999988652100 000012346678999998655433 467899
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH---
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA--- 1334 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~--- 1334 (1374)
||||||+|| ||||..+|++||||||-+|||+-|.+.|++.+
T Consensus 133 GGMrQRVai------------------------------------ARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~l 176 (248)
T COG1116 133 GGMRQRVAI------------------------------------ARALATRPKLLLLDEPFGALDALTREELQDELLRL 176 (248)
T ss_pred hHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHH
Confidence 999999999 99999999999999999999999988776643
Q ss_pred -HhcCceEEEecCCC-CchhhccceEEEEcCCC
Q 000647 1335 -KDMGITFVTSSQRP-ALIPFHSLELRLIDGEG 1365 (1374)
Q Consensus 1335 -~~~~~TvI~IaHRl-~~i~~~~~~l~l~~g~g 1365 (1374)
++.+.|+|.|||.. +.+-..|+++.|.++-|
T Consensus 177 w~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~ 209 (248)
T COG1116 177 WEETRKTVLLVTHDVDEAVYLADRVVVLSNRPG 209 (248)
T ss_pred HHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCc
Confidence 45689999999998 67788889998855433
No 220
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5.7e-35 Score=324.14 Aligned_cols=197 Identities=18% Similarity=0.305 Sum_probs=167.3
Q ss_pred EEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----------cccccE
Q 000647 446 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEI 515 (1374)
Q Consensus 446 ~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----------~~~~~i 515 (1374)
.+.|+.+.|+++.++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.+
T Consensus 2 ~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 81 (218)
T cd03290 2 QVTNGYFSWGSGLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYSV 81 (218)
T ss_pred eeeeeEEecCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcceE
Confidence 4678899998777899999999999999999999999999999999999999999999998641 124579
Q ss_pred EEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHH
Q 000647 516 FYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARL 592 (1374)
Q Consensus 516 ~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARa 592 (1374)
+|++|+|+++..|++||+.++... .+++..++++.+++.+.++..|.+.++ .....||||||||++||||
T Consensus 82 ~~~~q~~~~~~~t~~~nl~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~lara 154 (218)
T cd03290 82 AYAAQKPWLLNATVEENITFGSPF-------NKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARA 154 (218)
T ss_pred EEEcCCCccccccHHHHHhhcCcC-------CHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHH
Confidence 999999999989999999886421 234556788888988877766544332 2356899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHH--H---HHhcCCEEEEEccChhhHhhccEEEEecC
Q 000647 593 FYHKPKFAILDECTSAVTTDMEERFCA--K---VRAMGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 593 l~~~p~illLDEptsaLD~~~~~~i~~--~---l~~~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
++.+|+++||||||++||+.+.+.+++ . +++.|.|+|++||+.+.+..+|+++++++
T Consensus 155 l~~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~ 216 (218)
T cd03290 155 LYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKD 216 (218)
T ss_pred HhhCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecC
Confidence 999999999999999999999887776 3 33458999999999999999999999975
No 221
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=339.37 Aligned_cols=197 Identities=23% Similarity=0.272 Sum_probs=165.6
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc--------cccccE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEI 515 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~--------~~~~~i 515 (1374)
+++++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+- .+++.+
T Consensus 1 ml~~~~l~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 1 MLATSDLWFRYQ-DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred CeEEEEEEEEcC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 378999999996 46799999999999999999999999999999999999999999999998641 234679
Q ss_pred EEEecCCC--CCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 516 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 516 ~~v~Q~p~--l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
+|+||+|. ++..|+.+|+.++............+++.++++.+++.++.++.+ .+||||||||++|||||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrl~laraL 151 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPI--------QCLSHGQKKRVAIAGAL 151 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCCc--------hhCCHHHHHHHHHHHHH
Confidence 99999986 456789999987532111001112245677899999988777654 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+.+|+++||||||++||+.+...+.+.+++ .|+|+|+|||+++.+ ..+|++++|++
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~ 211 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQ 211 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999888764 488999999999988 47999999975
No 222
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.7e-35 Score=338.51 Aligned_cols=198 Identities=25% Similarity=0.372 Sum_probs=167.1
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------cccc
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLNK 513 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~~~ 513 (1374)
..|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++
T Consensus 6 ~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 6 NLVDMRGVSFTRG-NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred ceEEEeCeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 4699999999985 56799999999999999999999999999999999999999999999998531 1246
Q ss_pred cEEEEecCCCCCcC-CHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000647 514 EIFYVPQRPYTAVG-TLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1374)
Q Consensus 514 ~i~~v~Q~p~l~~~-Tv~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1374)
.++|+||++.++.. |+.||+.++..... .......+++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qrv~lar 156 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMP--------SELSGGMARRAALAR 156 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHH
Confidence 79999999988875 99999987532110 001112345677899999988777765 689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 592 al~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|++++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .+|++++|++
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~ 219 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVAD 219 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEEC
Confidence 99999999999999999999999998887764 3789999999998775 6999999975
No 223
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3e-35 Score=325.15 Aligned_cols=194 Identities=22% Similarity=0.321 Sum_probs=164.9
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC----ccccccEEEEec
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG----SDLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~----~~~~~~i~~v~Q 520 (1374)
++++||++.|+. .++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+||
T Consensus 1 ~~~~~l~~~~~~---~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 77 (213)
T TIGR01277 1 LALDKVRYEYEH---LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQ 77 (213)
T ss_pred CeEEeeeEEeCC---cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEec
Confidence 368999999862 4689999999999999999999999999999999999999999999864 134567999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
+|.++. .|+.||+.++...........+.++.++++.+++.+..++.| .+||||||||++||||++.+|++
T Consensus 78 ~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral~~~p~l 149 (213)
T TIGR01277 78 ENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP--------EQLSGGQRQRVALARCLVRPNPI 149 (213)
T ss_pred cCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc--------ccCCHHHHHHHHHHHHHhcCCCE
Confidence 999887 599999987532110001123456788999999998888876 58999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+||||||++||+.+.+.+.+.+++ .+.|+|+|||+++.+. .+|++++|++
T Consensus 150 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~ 204 (213)
T TIGR01277 150 LLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQ 204 (213)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEEC
Confidence 999999999999999999887754 3789999999999875 6999999975
No 224
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=5.2e-35 Score=326.37 Aligned_cols=202 Identities=26% Similarity=0.432 Sum_probs=164.0
Q ss_pred CCcEEEeeeEEEcCCC--CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccc
Q 000647 442 ANYIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNK 513 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~--~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~ 513 (1374)
.+.++++|+++.|++. .++++++||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ...++
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 4679999999999753 479999999999999999999999999999999999999999999999864 12356
Q ss_pred cEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCcc---ccCCCCCChhHHHHHHHH
Q 000647 514 EIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKE---INWGDELSLGEQQRLGMA 590 (1374)
Q Consensus 514 ~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~---~~~g~~LSgGqkQRlalA 590 (1374)
.++|+||+|.++..|++||+.++.... ...++.+..+..++.++++.++.+.. .....+||||||||++||
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~------~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~la 162 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSC------SFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIA 162 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCC------CHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHH
Confidence 799999999998899999998764321 11122222333344444444321111 112478999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 591 Ral~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
||++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+..+|+++++++
T Consensus 163 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~ 223 (226)
T cd03248 163 RALIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDG 223 (226)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecC
Confidence 999999999999999999999999999998875 36899999999999988999999975
No 225
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.2e-35 Score=333.84 Aligned_cols=197 Identities=23% Similarity=0.259 Sum_probs=166.1
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCC-----ccEEEeCCCCc--------c
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS--------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~-----~G~I~~~g~~~--------~ 510 (1374)
.++++||++.|+ +.++++|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+. .
T Consensus 1 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 1 AIEIENLNLFYG-EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred CEEEEEEEEEEC-CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 378999999986 457999999999999999999999999999999999999998 99999998641 1
Q ss_pred ccccEEEEecCCCCCcCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCCh----hHHhcCCCCccccCCCCCChhHHH
Q 000647 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQQ 585 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~L~----~~~~~~~~~~~~~~g~~LSgGqkQ 585 (1374)
.++.++|+||++.++..|++||+.++...... .....++++.++++.+++. +..++.+ .+|||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgG~~q 151 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSA--------LGLSGGQQQ 151 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCc--------ccCCHHHHH
Confidence 34679999999998889999999875321110 0111234577889999997 5555544 689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 586 RlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|++|||||+++|+++||||||++||+.+...+++.+++ .++|+|+|||+++.+ ..+|++++|++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYD 218 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999988765 358999999999977 57999999986
No 226
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=341.04 Aligned_cols=197 Identities=23% Similarity=0.304 Sum_probs=164.1
Q ss_pred EEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----------c
Q 000647 445 IEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------D 510 (1374)
Q Consensus 445 i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----------~ 510 (1374)
++++||++.|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 7899999999753 4699999999999999999999999999999999999999999999998531 1
Q ss_pred ccccEEEEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhHHHHH
Q 000647 511 LNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQRL 587 (1374)
Q Consensus 511 ~~~~i~~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1374)
+++.|+|+||+| .++..|++||+.++............+.+.++++.+++. +..++.+ .+||||||||+
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LSgG~~qrv 154 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNP--------FELSGGQMRRV 154 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCc--------ccCCHHHHHHH
Confidence 346799999998 577789999998753211100011123456788899996 4555544 68999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 588 alARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|+++++++
T Consensus 155 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 220 (280)
T PRK13649 155 AIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEK 220 (280)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999888764 489999999999987 47999999985
No 227
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=339.09 Aligned_cols=197 Identities=25% Similarity=0.364 Sum_probs=167.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc--------cccccEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEIF 516 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~--------~~~~~i~ 516 (1374)
++++|+++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.|+
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 81 (275)
T PRK13639 2 LETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTVG 81 (275)
T ss_pred EEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhheE
Confidence 78999999997556799999999999999999999999999999999999999999999998541 1356799
Q ss_pred EEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 517 YVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 517 ~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
|+||+| .++..|+.||+.++............+++.++++.++|.++.++.+ .+||||||||++||||++
T Consensus 82 ~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LS~Gq~qrv~laral~ 153 (275)
T PRK13639 82 IVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPP--------HHLSGGQKKRVAIAGILA 153 (275)
T ss_pred EEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCCh--------hhCCHHHHHHHHHHHHHh
Confidence 999998 4677899999987532111001112345778999999988877765 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
.+|+++||||||++||+.+...+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 154 ~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~ 212 (275)
T PRK13639 154 MKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSD 212 (275)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999888764 4899999999999875 7999999975
No 228
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=339.98 Aligned_cols=199 Identities=27% Similarity=0.388 Sum_probs=169.8
Q ss_pred CcEEEeeeEEEcCC-CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCc---cEEEeCCCCc------ccc
Q 000647 443 NYIEFSGVKVVTPT-GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVS---GHIAKPGVGS------DLN 512 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~-~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~---G~I~~~g~~~------~~~ 512 (1374)
..++++|+++.|++ .+++++|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.+. ..+
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 46999999999975 3579999999999999999999999999999999999999987 8999998641 235
Q ss_pred ccEEEEecCCC--CCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000647 513 KEIFYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1374)
Q Consensus 513 ~~i~~v~Q~p~--l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1374)
++++|+||+|. ++..|+.||+.|+...........++++.++++.++|.++.++.| .+||||||||++||
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~--------~~LS~G~~qrv~la 155 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP--------ANLSGGQKQRVAIA 155 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc--------ccCCHHHHHHHHHH
Confidence 68999999984 567899999987632211101111245778899999998888877 68999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 591 Ral~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
|||+++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..||++++|++
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~ 218 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDD 218 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999887754 38999999999999989999999975
No 229
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.9e-35 Score=346.43 Aligned_cols=198 Identities=25% Similarity=0.296 Sum_probs=168.1
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEE
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFY 517 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~ 517 (1374)
..|+++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.|+|
T Consensus 40 ~~i~i~nl~k~y~-~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig~ 118 (340)
T PRK13536 40 VAIDLAGVSKSYG-DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIGV 118 (340)
T ss_pred eeEEEEEEEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEEE
Confidence 4699999999995 5679999999999999999999999999999999999999999999999964 134578999
Q ss_pred EecCCCCC-cCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccC
Q 000647 518 VPQRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHK 596 (1374)
Q Consensus 518 v~Q~p~l~-~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~ 596 (1374)
+||++.++ ..|++||+.+.............+++.++++.++|.+..++.+ .+||||||||++|||||+++
T Consensus 119 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~--------~~LS~G~kqrv~lA~aL~~~ 190 (340)
T PRK13536 119 VPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARV--------SDLSGGMKRRLTLARALIND 190 (340)
T ss_pred EeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCCh--------hhCCHHHHHHHHHHHHHhcC
Confidence 99999886 4699999975321111100112234667889999988777654 58999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 597 PKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 597 p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|+++||||||+|||+.+...+.+.+++ .|+|+|++||+++.+. .||+|+++++
T Consensus 191 P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~ 247 (340)
T PRK13536 191 PQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEA 247 (340)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999988765 4899999999999885 7999999985
No 230
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-35 Score=333.19 Aligned_cols=197 Identities=28% Similarity=0.385 Sum_probs=167.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
.++++|+++.|+ ++++++|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 2 ~l~~~~l~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 2 MLEARNLSVRLG-GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred eEEEEeEEEEeC-CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 478999999996 4679999999999999999999999999999999999999999999999853 123467999
Q ss_pred EecCCCC-CcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc--
Q 000647 518 VPQRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY-- 594 (1374)
Q Consensus 518 v~Q~p~l-~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~-- 594 (1374)
+||++.+ +..|++||+.++...........+.++.++++.+++.+..++.+ .+||||||||++|||||+
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgGe~qrv~la~al~~~ 152 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDY--------PQLSGGEQQRVQLARVLAQL 152 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCc--------ccCCHHHHHHHHHHHHHhcc
Confidence 9999987 56799999987542211111112345778899999988777765 689999999999999999
Q ss_pred ----cCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 595 ----HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 595 ----~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 153 ~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 216 (258)
T PRK13548 153 WEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQ 216 (258)
T ss_pred cccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEEC
Confidence 59999999999999999999998887653 4789999999999875 7999999975
No 231
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=337.43 Aligned_cols=199 Identities=26% Similarity=0.333 Sum_probs=168.6
Q ss_pred CcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccE
Q 000647 443 NYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEI 515 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i 515 (1374)
+.++++|+++.|++. +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.+
T Consensus 6 ~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 6 SIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred ceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 469999999999754 469999999999999999999999999999999999999999999999864 1245679
Q ss_pred EEEecCCC--CCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 516 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 516 ~~v~Q~p~--l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
+|+||+|. ++..|+++|+.++............+++.++++.+++.++.++.+ .+||||||||++||||+
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral 157 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEP--------NALSGGQKQRVAIAGVL 157 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 99999984 455689999988643211111112345678899999988777765 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..+|+++++++
T Consensus 158 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~ 217 (269)
T PRK13648 158 ALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNK 217 (269)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEEC
Confidence 999999999999999999999999887754 37899999999998888999999975
No 232
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=341.45 Aligned_cols=199 Identities=24% Similarity=0.259 Sum_probs=164.5
Q ss_pred CcEEEeeeEEEcCCC----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC----------
Q 000647 443 NYIEFSGVKVVTPTG----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---------- 508 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~---------- 508 (1374)
+.|+++|+++.|++. .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 469999999999653 259999999999999999999999999999999999999999999998853
Q ss_pred -ccccccEEEEecCC--CCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhHH
Q 000647 509 -SDLNKEIFYVPQRP--YTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 509 -~~~~~~i~~v~Q~p--~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGqk 584 (1374)
..+++.++|+||+| .++..|++||+.++............+++.++++.++|. ++.++.+ .+||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~--------~~LS~Gq~ 156 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSP--------FELSGGQK 156 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCCh--------hhCCHHHH
Confidence 12356799999998 356679999998753211100011123456788888984 5666544 68999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||++|||||+++|+++||||||++||+.+.+.+++.+++ .|+|+|+|||+++.+ +.+|+++++++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~ 226 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHE 226 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999887653 389999999999976 57999999985
No 233
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=7.1e-35 Score=331.28 Aligned_cols=201 Identities=24% Similarity=0.346 Sum_probs=175.0
Q ss_pred CCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------cccccc
Q 000647 442 ANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKE 514 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~ 514 (1374)
.+.|+++|+++.|++. +.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..+++.
T Consensus 17 ~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~ 96 (257)
T cd03288 17 GGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSR 96 (257)
T ss_pred CceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhhh
Confidence 5679999999999753 579999999999999999999999999999999999999999999999864 134578
Q ss_pred EEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHH
Q 000647 515 IFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMAR 591 (1374)
Q Consensus 515 i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalAR 591 (1374)
++|+||+|.++.+|+++|+..... ....++.++++.+++.+.++.+|.+.++ .++..||||||||++|||
T Consensus 97 i~~v~q~~~l~~~tv~~nl~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~lar 169 (257)
T cd03288 97 LSIILQDPILFSGSIRFNLDPECK-------CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLAR 169 (257)
T ss_pred EEEECCCCcccccHHHHhcCcCCC-------CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHH
Confidence 999999999999999999864311 1344567788888999888887644332 356799999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 592 al~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
|++++|+++||||||++||+++++.+++.+++ .+.|+|++||+++.+..+|++++|++
T Consensus 170 al~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~ 229 (257)
T cd03288 170 AFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSR 229 (257)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEEC
Confidence 99999999999999999999999999888865 48999999999999988999999985
No 234
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=5e-35 Score=329.15 Aligned_cols=199 Identities=28% Similarity=0.452 Sum_probs=169.5
Q ss_pred EEEeeeEEEcCC--CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEE
Q 000647 445 IEFSGVKVVTPT--GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 516 (1374)
Q Consensus 445 i~~~~v~~~~~~--~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~ 516 (1374)
++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 468999999875 3579999999999999999999999999999999999999999999999854 12346799
Q ss_pred EEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHH
Q 000647 517 YVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 517 ~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal 593 (1374)
|+||+|.++..|++||+.++... ...+++.+.++..++.++.+.+|.+..+ ....+||||||||++||||+
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al 154 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPD------ATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARAL 154 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCC------CCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHH
Confidence 99999998888999999886432 1234456677788888887776543221 23578999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+.+|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+..+|+++++++
T Consensus 155 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~ 212 (238)
T cd03249 155 LRNPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQN 212 (238)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEEC
Confidence 999999999999999999999999988764 47899999999999989999999976
No 235
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=338.54 Aligned_cols=195 Identities=27% Similarity=0.325 Sum_probs=164.5
Q ss_pred EEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------cc----cccE
Q 000647 446 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DL----NKEI 515 (1374)
Q Consensus 446 ~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~~----~~~i 515 (1374)
.++|+++.|. ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+ ++++
T Consensus 26 ~~~~~~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i 104 (269)
T cd03294 26 SKEEILKKTG-QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKI 104 (269)
T ss_pred hhhhhhhhcC-CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcE
Confidence 5678888774 56799999999999999999999999999999999999999999999998541 11 3579
Q ss_pred EEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 516 FYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 516 ~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
+|+||+|.++. .|++||+.++...........++++.++++.++|.+..++.+ .+||||||||++||||++
T Consensus 105 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Gq~qrv~lAral~ 176 (269)
T cd03294 105 SMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP--------DELSGGMQQRVGLARALA 176 (269)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc--------ccCCHHHHHHHHHHHHHh
Confidence 99999998875 699999987532111001112346778999999998888876 589999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+ ..+|++++|++
T Consensus 177 ~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~ 236 (269)
T cd03294 177 VDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKD 236 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999999987754 379999999999886 57999999975
No 236
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.8e-35 Score=336.17 Aligned_cols=209 Identities=23% Similarity=0.259 Sum_probs=181.2
Q ss_pred CCCCEEEeeeEEeCCCc-ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcc
Q 000647 1096 YQDSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGC 1172 (1374)
Q Consensus 1096 ~~g~I~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~ 1172 (1374)
..|.|+++||++.|+.. +.+++|+||+|+|||.+||+|+||||||||+++|.|+++|.+|+|.++|.++.+. ...+.
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46889999999999763 6799999999999999999999999999999999999999999999999988765 24567
Q ss_pred cEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-
Q 000647 1173 GIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN- 1251 (1374)
Q Consensus 1173 ~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~- 1251 (1374)
+++++||+|.+|++|+++|+.+... ..++.++++++.+++.+.++.+|.|+++..+
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~-----------------------~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~ 152 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECK-----------------------CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTE 152 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCC-----------------------CCHHHHHHHHHHhCcHHHHhhcccccCcEecc
Confidence 8999999999999999999863211 1123355667777888888888889998763
Q ss_pred cccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHH
Q 000647 1252 WEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLY 1331 (1374)
Q Consensus 1252 ~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~ 1331 (1374)
++..||+|||||+++ |||++++|+++||||||++||+++++.+.
T Consensus 153 ~~~~LS~G~~qrl~l------------------------------------aral~~~p~llllDEPt~gLD~~~~~~l~ 196 (257)
T cd03288 153 GGENFSVGQRQLFCL------------------------------------ARAFVRKSSILIMDEATASIDMATENILQ 196 (257)
T ss_pred CCCcCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCccCCCHHHHHHHH
Confidence 678999999999999 99999999999999999999999998887
Q ss_pred HHHHh--cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1332 RLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1332 ~~~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
++++. .++|+|+++|+++.+...|+++.|.+|
T Consensus 197 ~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G 230 (257)
T cd03288 197 KVVMTAFADRTVVTIAHRVSTILDADLVLVLSRG 230 (257)
T ss_pred HHHHHhcCCCEEEEEecChHHHHhCCEEEEEECC
Confidence 76654 489999999999999889999999544
No 237
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.3e-35 Score=330.96 Aligned_cols=196 Identities=27% Similarity=0.395 Sum_probs=166.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-c-------cccccEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-S-------DLNKEIF 516 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~-------~~~~~i~ 516 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ . .+++.++
T Consensus 2 l~~~~l~~~~~-~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 80 (240)
T PRK09493 2 IEFKNVSKHFG-PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG 80 (240)
T ss_pred EEEEeEEEEEC-CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceE
Confidence 78999999985 4679999999999999999999999999999999999999999999999854 1 2356799
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCC-CcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~-~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
|+||++.++. .|++||+.++... ........++++.++++.+++++..++.+ ..||||||||++||||++
T Consensus 81 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~la~al~ 152 (240)
T PRK09493 81 MVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYP--------SELSGGQQQRVAIARALA 152 (240)
T ss_pred EEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcCh--------hhcCHHHHHHHHHHHHHh
Confidence 9999998775 6999999875311 01001112345678899999988877765 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++|+++||||||++||+++.+.+.+.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 153 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 211 (240)
T PRK09493 153 VKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDK 211 (240)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999887754 4899999999999985 6999999975
No 238
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=331.57 Aligned_cols=209 Identities=23% Similarity=0.325 Sum_probs=179.5
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEE
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIF 1175 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~ 1175 (1374)
|.|+++|+++.|++.+++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.+. ...|++++
T Consensus 1 ~~l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (229)
T cd03254 1 GEIEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIG 80 (229)
T ss_pred CeEEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEE
Confidence 4689999999998666799999999999999999999999999999999999999999999999988764 24567799
Q ss_pred EecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-ccc
Q 000647 1176 YVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WED 1254 (1374)
Q Consensus 1176 ~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~-~g~ 1254 (1374)
|+||+|.+|.+|++||+.++... ..+.++.+.++.+++.+.++++|.|+++..+ +..
T Consensus 81 ~~~q~~~~~~~tv~~~~~~~~~~----------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 138 (229)
T cd03254 81 VVLQDTFLFSGTIMENIRLGRPN----------------------ATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGG 138 (229)
T ss_pred EecCCchhhhhHHHHHHhccCCC----------------------CCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCC
Confidence 99999999999999999765321 1123345566777888888888888887753 467
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
.||+|||||++| ||||+++|+++||||||++||.++.+.+.+.+
T Consensus 139 ~LS~G~~~rv~l------------------------------------a~al~~~p~llllDEP~~~LD~~~~~~l~~~l 182 (229)
T cd03254 139 NLSQGERQLLAI------------------------------------ARAMLRDPKILILDEATSNIDTETEKLIQEAL 182 (229)
T ss_pred cCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCccccCCHHHHHHHHHHH
Confidence 899999999999 99999999999999999999999998887765
Q ss_pred Hh--cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1335 KD--MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1335 ~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
+. .+.|+|+|+|.++.+...++++.|.+|+
T Consensus 183 ~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~ 214 (229)
T cd03254 183 EKLMKGRTSIIIAHRLSTIKNADKILVLDDGK 214 (229)
T ss_pred HHhcCCCEEEEEecCHHHHhhCCEEEEEeCCe
Confidence 53 4899999999998888889999997665
No 239
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.8e-35 Score=320.92 Aligned_cols=186 Identities=26% Similarity=0.393 Sum_probs=159.7
Q ss_pred CCcEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------cccccc
Q 000647 442 ANYIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKE 514 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~ 514 (1374)
.+.++++|+++.|++. +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ .+.++.
T Consensus 4 ~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 4 HGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 4579999999999753 579999999999999999999999999999999999999999999999864 124568
Q ss_pred EEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 515 IFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 515 i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
++|+||+|+++.+|++||+.+... ...+++.++++ .++. ...||||||||++||||++
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-------~~~~~~~~~l~-------~~~~--------~~~LS~G~~qrv~laral~ 141 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-------YSDEEIYGALR-------VSEG--------GLNLSQGQRQLLCLARALL 141 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-------CCHHHHHHHhh-------ccCC--------CCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999976321 12334444444 1222 3689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+..+|++++|++
T Consensus 142 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~ 198 (207)
T cd03369 142 KRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDA 198 (207)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEEC
Confidence 99999999999999999999999998875 37899999999999888999999985
No 240
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1e-35 Score=327.48 Aligned_cols=207 Identities=25% Similarity=0.286 Sum_probs=168.5
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEE
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~ 1176 (1374)
.++.+|++|.|+ ++++++|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.+|.++ ..+-+.|+|
T Consensus 2 ~L~~~~ls~~y~-~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~ 80 (258)
T COG1120 2 MLEVENLSFGYG-GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAY 80 (258)
T ss_pred eeEEEEEEEEEC-CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEE
Confidence 378999999997 78899999999999999999999999999999999999999999999999999998 345567999
Q ss_pred ecCCCCCC-CcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1177 VPQRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf-~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
|||+|... .-|++|-+.+|....- +-.. ...+.+.+.+.++|+.+++.++.++. -+.
T Consensus 81 vpQ~~~~~~~~tV~d~V~~GR~p~~-----------~~~~-~~~~~D~~~v~~aL~~~~~~~la~r~----------~~~ 138 (258)
T COG1120 81 VPQSPSAPFGLTVYELVLLGRYPHL-----------GLFG-RPSKEDEEIVEEALELLGLEHLADRP----------VDE 138 (258)
T ss_pred eccCCCCCCCcEEeehHhhcCCccc-----------cccc-CCCHhHHHHHHHHHHHhCcHHHhcCc----------ccc
Confidence 99998654 5599998876532100 0000 00011122466789999988876653 257
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||||||||+.| ||||..+|+||+||||||+||...+-.+.++++
T Consensus 139 LSGGerQrv~i------------------------------------ArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~ 182 (258)
T COG1120 139 LSGGERQRVLI------------------------------------ARALAQETPILLLDEPTSHLDIAHQIEVLELLR 182 (258)
T ss_pred cChhHHHHHHH------------------------------------HHHHhcCCCEEEeCCCccccCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999876655543
Q ss_pred ----hcCceEEEecCCC-CchhhccceEEEEcCC
Q 000647 1336 ----DMGITFVTSSQRP-ALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1336 ----~~~~TvI~IaHRl-~~i~~~~~~l~l~~g~ 1364 (1374)
+.|+|+|+|.|.+ -...|.|+.+.+.+|+
T Consensus 183 ~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~ 216 (258)
T COG1120 183 DLNREKGLTVVMVLHDLNLAARYADHLILLKDGK 216 (258)
T ss_pred HHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCe
Confidence 4699999999999 5578999999997664
No 241
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=3.1e-35 Score=326.64 Aligned_cols=197 Identities=25% Similarity=0.428 Sum_probs=168.4
Q ss_pred EEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------ccc
Q 000647 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---------DLN 512 (1374)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---------~~~ 512 (1374)
++++|+++.|+++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 6899999998642 6799999999999999999999999999999999999999999999998641 134
Q ss_pred ccEEEEecCCCCCc-CCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHH
Q 000647 513 KEIFYVPQRPYTAV-GTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMA 590 (1374)
Q Consensus 513 ~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalA 590 (1374)
+.++|+||+|.++. .|+.||+.++...... ......+++.++++.+++.+..++.| ..||||||||++||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qrv~la 153 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP--------HNLSGGQKQRVAIA 153 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh--------hhCCHHHHHHHHHH
Confidence 68999999998887 6999999875321110 00112345788999999998888876 58999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 591 RLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 591 Ral~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
||++.+|+++||||||++||+++.+.+++.+++ .++|+|++||+++....+|++++|++
T Consensus 154 ral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~ 216 (220)
T TIGR02982 154 RALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMED 216 (220)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEEC
Confidence 999999999999999999999999998887753 47999999999998889999999975
No 242
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=333.71 Aligned_cols=198 Identities=27% Similarity=0.353 Sum_probs=168.5
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEE
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 516 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~ 516 (1374)
..++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ .++++.++
T Consensus 10 ~~l~i~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 10 TTFALRNVSFRVP-GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred ceEEEeeEEEEEC-CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 4699999999996 4689999999999999999999999999999999999999999999999854 12456799
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCCc----ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~~----~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1374)
|+||++.++. .|+.||+.++..... ......++++.++++.+++.+..++.+ .+||||||||++|||
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~lar 160 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV--------DSLSGGERQRAWIAM 160 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc--------ccCCHHHHHHHHHHH
Confidence 9999986655 599999987632110 001112456788999999998888766 589999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 592 al~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|++.+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+ ..+|++++|++
T Consensus 161 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~ 223 (265)
T PRK10575 161 LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRG 223 (265)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999998887753 389999999999988 47999999975
No 243
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=337.34 Aligned_cols=198 Identities=23% Similarity=0.303 Sum_probs=168.5
Q ss_pred cEEEeeeEEEcCCC--CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccE
Q 000647 444 YIEFSGVKVVTPTG--NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEI 515 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~--~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i 515 (1374)
.++++|+++.|++. .++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 58999999999742 469999999999999999999999999999999999999999999999854 1245679
Q ss_pred EEEecCCC--CCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 516 FYVPQRPY--TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 516 ~~v~Q~p~--l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
+|+||+|. ++..|+.|||.++............+++.++++.+++.++.++.+ ..||||||||++|||||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~lAraL 155 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREP--------ARLSGGQKQRVAVAGII 155 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 99999983 567899999987532111101111245678899999998887765 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHhhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+.+|+++||||||++||+.+.+.+++.+++ .|.|+|++||+++.+..+|++++|++
T Consensus 156 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~ 215 (277)
T PRK13642 156 ALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKA 215 (277)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 999999999999999999999999887753 38999999999999988999999985
No 244
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.8e-35 Score=332.46 Aligned_cols=207 Identities=20% Similarity=0.263 Sum_probs=173.8
Q ss_pred EEEeeeEEeCCC-cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEE
Q 000647 1100 ISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1374)
Q Consensus 1100 I~f~~V~~~yp~-~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~ 1176 (1374)
|+++||++.|++ .+++++|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++... ...|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 578999999875 46799999999999999999999999999999999999999999999999988654 234667999
Q ss_pred ecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-cccC
Q 000647 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~-~g~~ 1255 (1374)
+||+|.+|+.|++|||.++.... ....+.+.++..++.++++.+|.|+++..+ ...+
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 138 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGM----------------------SMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAG 138 (237)
T ss_pred EcCCchhccchHHHHhhccCCCC----------------------CHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCc
Confidence 99999999999999998653210 111233445556666777777778877653 4678
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||||||||++| |||++++|+++||||||++||.++.+.+.+.++
T Consensus 139 LSgG~~qrv~l------------------------------------aral~~~p~llllDEP~~~LD~~~~~~l~~~l~ 182 (237)
T cd03252 139 LSGGQRQRIAI------------------------------------ARALIHNPRILIFDEATSALDYESEHAIMRNMH 182 (237)
T ss_pred CCHHHHHHHHH------------------------------------HHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999988877665
Q ss_pred h--cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1336 D--MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1336 ~--~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
+ .|+|+|+++|+++.+...++++.|.+|+
T Consensus 183 ~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~ 213 (237)
T cd03252 183 DICAGRTVIIIAHRLSTVKNADRIIVMEKGR 213 (237)
T ss_pred HhcCCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 3 4899999999998888889999996553
No 245
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.7e-35 Score=329.51 Aligned_cols=197 Identities=25% Similarity=0.344 Sum_probs=167.7
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-c------ccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-D------LNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-~------~~~~i~ 516 (1374)
.|+++|+++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.++
T Consensus 2 ~i~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 2 ILYLEGLSVSFDG-FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred eEEEEeeEEEcCC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 5789999999964 6799999999999999999999999999999999999999999999998641 1 234699
Q ss_pred EEecCCCCCcC-CHHHHhcCCCCCCcc--------cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHH
Q 000647 517 YVPQRPYTAVG-TLRDQLIYPLTSDQE--------VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRL 587 (1374)
Q Consensus 517 ~v~Q~p~l~~~-Tv~eni~~~~~~~~~--------~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1374)
|+||++.++.+ |++||+.++...... .....+.++.++++.+++.+..++.+ ..||||||||+
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Ge~qrv 152 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA--------GLLSHGQKQWL 152 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHH
Confidence 99999998875 999999875321100 00112346788899999987776655 68999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 588 alARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+||||++++|+++||||||++||+.+.+.+++.+++ .++|+|++||+++.+. .||+++++++
T Consensus 153 ~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 153 EIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred HHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999998875 3689999999999885 6999999975
No 246
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.4e-35 Score=328.54 Aligned_cols=202 Identities=25% Similarity=0.322 Sum_probs=165.4
Q ss_pred EEEeeeEEeCCCc-ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCccc
Q 000647 1100 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCG 1173 (1374)
Q Consensus 1100 I~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r~~ 1173 (1374)
|+++||++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 7899999999764 57999999999999999999999999999999999999999999999999886542 24568
Q ss_pred EEEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccc
Q 000647 1174 IFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1374)
Q Consensus 1174 i~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~ 1252 (1374)
++||||+|.+|. .|++||+.++... .+. .....++++.++++.+++.+...+.
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~---------- 135 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRI----------IGV------PPRDANERVSAALEKVGLEGKAHAL---------- 135 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHh----------cCC------CHHHHHHHHHHHHHHcCChhhhhCC----------
Confidence 999999999987 5999999765210 000 0001133466788888876554443
Q ss_pred ccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH
Q 000647 1253 EDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR 1332 (1374)
Q Consensus 1253 g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~ 1332 (1374)
...||||||||++| ||||+++|+++||||||++||.++.+.+.+
T Consensus 136 ~~~LSgG~~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l~~ 179 (216)
T TIGR00960 136 PMQLSGGEQQRVAI------------------------------------ARAIVHKPPLLLADEPTGNLDPELSRDIMR 179 (216)
T ss_pred hhhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCCcCCHHHHHHHHH
Confidence 24699999999999 999999999999999999999999988877
Q ss_pred HHHh---cCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1333 LAKD---MGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1333 ~~~~---~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
.+++ .|.|+|+|+|+++.+. +.|+++.+.+|
T Consensus 180 ~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 180 LFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRG 214 (216)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 6543 4899999999998775 68999999655
No 247
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.2e-35 Score=333.20 Aligned_cols=197 Identities=25% Similarity=0.349 Sum_probs=165.8
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc--------------
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------------- 509 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-------------- 509 (1374)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+-
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (250)
T PRK11264 3 AIEVKNLVKKFH-GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIR 81 (250)
T ss_pred cEEEeceEEEEC-CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHH
Confidence 589999999996 45799999999999999999999999999999999999999999999988531
Q ss_pred cccccEEEEecCCCCCc-CCHHHHhcCCCC-CCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHH
Q 000647 510 DLNKEIFYVPQRPYTAV-GTLRDQLIYPLT-SDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRL 587 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~-~Tv~eni~~~~~-~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1374)
.+++.++|+||+|.++. .|++||+.++.. ..........+++.++++.+++.+..++.+ .+||||||||+
T Consensus 82 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~Gq~qrv 153 (250)
T PRK11264 82 QLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYP--------RRLSGGQQQRV 153 (250)
T ss_pred HhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCCh--------hhCChHHHHHH
Confidence 13467999999998875 699999986421 011001112345678899999987766654 68999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 588 alARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+||||++++|+++||||||++||+.+.+.+++.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~ 219 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQ 219 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999999887754 4899999999999885 6999999975
No 248
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=330.19 Aligned_cols=197 Identities=25% Similarity=0.354 Sum_probs=166.5
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------------cc
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------------DL 511 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------------~~ 511 (1374)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+- ..
T Consensus 2 ~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 2 SIQLNGINCFYG-AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEEeeEEEEC-CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 378999999996 46799999999999999999999999999999999999999999999998531 13
Q ss_pred cccEEEEecCCCCCc-CCHHHHhcCCC-CCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHH
Q 000647 512 NKEIFYVPQRPYTAV-GTLRDQLIYPL-TSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 512 ~~~i~~v~Q~p~l~~-~Tv~eni~~~~-~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
++.++|+||+|.++. .|+.||+.+.. ............++.++++.++++++.++.+ ..||||||||++|
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~l 152 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFP--------LHLSGGQQQRVAI 152 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHH
Confidence 467999999998886 49999997421 1000000112345778899999988888766 5899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||++.+|+++||||||++||+++.+.+.+.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~ 216 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMEN 216 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999887764 4899999999999885 6999999975
No 249
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-35 Score=314.97 Aligned_cols=199 Identities=30% Similarity=0.375 Sum_probs=158.8
Q ss_pred CEEEeeeEEeCCCcc---cccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc---CCcc
Q 000647 1099 SISFSKLDIITPSQK---LLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGC 1172 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~---~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~---~~r~ 1172 (1374)
.++.+|+++.|+... ++++|+||+|.+||++||||+||||||||.++|.|+-+|.+|+|.++|.++.... ..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 478999999998765 7999999999999999999999999999999999999999999999998766542 3456
Q ss_pred cEEEecCCCCC---CCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchh-hhhhccCCcc
Q 000647 1173 GIFYVPQRPYT---CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYL-LEREEVGWDA 1248 (1374)
Q Consensus 1173 ~i~~VpQ~P~L---f~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~-v~~~~~Gldt 1248 (1374)
.+-+|+|||+- +.-|+++-|.-|+.. .+. +....+++++|+.|||..- +.+
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~----------~~~--------~~~~~~i~~~L~~VgL~~~~l~R------- 137 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRP----------HGL--------SKSQQRIAELLDQVGLPPSFLDR------- 137 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhcc----------CCc--------cHHHHHHHHHHHHcCCCHHHHhc-------
Confidence 79999999984 223666665444321 110 0112337788999988543 222
Q ss_pred ccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHH
Q 000647 1249 NLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEE 1328 (1374)
Q Consensus 1249 ~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~ 1328 (1374)
+..+|||||+||+|| ||||.-+||+|||||||||||+-++.
T Consensus 138 ---~P~eLSGGQ~QRiaI------------------------------------ARAL~~~PklLIlDEptSaLD~siQa 178 (252)
T COG1124 138 ---RPHELSGGQRQRIAI------------------------------------ARALIPEPKLLILDEPTSALDVSVQA 178 (252)
T ss_pred ---CchhcChhHHHHHHH------------------------------------HHHhccCCCEEEecCchhhhcHHHHH
Confidence 356799999999999 99999999999999999999999998
Q ss_pred HHHHHH----HhcCceEEEecCCCCchhh-ccceEEEE
Q 000647 1329 QLYRLA----KDMGITFVTSSQRPALIPF-HSLELRLI 1361 (1374)
Q Consensus 1329 ~l~~~~----~~~~~TvI~IaHRl~~i~~-~~~~l~l~ 1361 (1374)
++.++. ++.+.|+|.|+|.++++.+ +|++..+.
T Consensus 179 ~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 179 QILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred HHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeee
Confidence 765543 4479999999999988755 67776663
No 250
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.4e-35 Score=343.55 Aligned_cols=199 Identities=29% Similarity=0.383 Sum_probs=166.4
Q ss_pred CcEEEeeeEEEcCC------------CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-
Q 000647 443 NYIEFSGVKVVTPT------------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~------------~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~- 509 (1374)
..++++|+++.|+. ...+++|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|.+.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 46999999998863 24699999999999999999999999999999999999999999999998641
Q ss_pred --------cccccEEEEecCC--CCC-cCCHHHHhcCCCCCC--cccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccC
Q 000647 510 --------DLNKEIFYVPQRP--YTA-VGTLRDQLIYPLTSD--QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINW 575 (1374)
Q Consensus 510 --------~~~~~i~~v~Q~p--~l~-~~Tv~eni~~~~~~~--~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~ 575 (1374)
.++++|+||+|+| .++ ..|+.|||.++.... ........+++.++++.+++. +..++.|
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p------- 159 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYP------- 159 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCc-------
Confidence 1356899999998 354 579999997653211 001111234567889999994 5667776
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 576 GDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 576 g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
.+||||||||++|||||+.+|+++|+||||++||..+...+++.+++ .|.|+|+||||++.+. .+|+|++|.+
T Consensus 160 -~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 160 -HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 68999999999999999999999999999999999999999887753 3899999999999986 6999999975
No 251
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-35 Score=325.40 Aligned_cols=194 Identities=21% Similarity=0.317 Sum_probs=165.1
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----cccccEEEEec
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----~~~~~i~~v~Q 520 (1374)
++++||++.|++ .. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 2 l~~~~l~~~~~~-~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 78 (232)
T PRK10771 2 LKLTDITWLYHH-LP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQ 78 (232)
T ss_pred eEEEEEEEEECC-cc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEec
Confidence 789999999963 32 399999999999999999999999999999999999999999998641 12457999999
Q ss_pred CCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
+|.++.+ |+.||+.++...........++++.++++.+++++..++.| ..||||||||++||||++++|++
T Consensus 79 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~l 150 (232)
T PRK10771 79 ENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP--------GQLSGGQRQRVALARCLVREQPI 150 (232)
T ss_pred ccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc--------ccCCHHHHHHHHHHHHHhcCCCE
Confidence 9988875 99999987632110011123456888999999998888877 58999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 151 llLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 205 (232)
T PRK10771 151 LLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVAD 205 (232)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999887754 3789999999999875 6999999975
No 252
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.2e-35 Score=321.83 Aligned_cols=194 Identities=25% Similarity=0.355 Sum_probs=166.3
Q ss_pred EEEeeeEEeCCCc----ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEE
Q 000647 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIF 1175 (1374)
Q Consensus 1100 I~f~~V~~~yp~~----~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~ 1175 (1374)
|+++||++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++| +|+
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-----------~i~ 69 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-----------SIA 69 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-----------EEE
Confidence 5799999998764 4799999999999999999999999999999999999999999999998 499
Q ss_pred EecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-ccc
Q 000647 1176 YVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WED 1254 (1374)
Q Consensus 1176 ~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~-~g~ 1254 (1374)
||||+|.+|++|++||+.|+...+ ++...++++.+++.+.+...|.|+++..+ ...
T Consensus 70 ~~~q~~~l~~~t~~enl~~~~~~~-----------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 126 (204)
T cd03250 70 YVSQEPWIQNGTIRENILFGKPFD-----------------------EERYEKVIKACALEPDLEILPDGDLTEIGEKGI 126 (204)
T ss_pred EEecCchhccCcHHHHhccCCCcC-----------------------HHHHHHHHHHcCcHHHHHhccCcccceecCCCC
Confidence 999999999999999998764311 22234556667777777777888888753 567
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH-H
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR-L 1333 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~-~ 1333 (1374)
.||+|||||++| |||++.+|+++||||||++||.+..+.+.+ +
T Consensus 127 ~lS~G~~qrv~l------------------------------------aral~~~p~llllDEP~~~LD~~~~~~l~~~l 170 (204)
T cd03250 127 NLSGGQKQRISL------------------------------------ARAVYSDADIYLLDDPLSAVDAHVGRHIFENC 170 (204)
T ss_pred cCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCccccCCHHHHHHHHHHH
Confidence 899999999999 999999999999999999999999876654 3
Q ss_pred HH---hcCceEEEecCCCCchhhccceEEEEcC
Q 000647 1334 AK---DMGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1334 ~~---~~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
++ ..|.|+|+|+|+++.+...++++.+.+|
T Consensus 171 l~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G 203 (204)
T cd03250 171 ILGLLLNNKTRILVTHQLQLLPHADQIVVLDNG 203 (204)
T ss_pred HHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCC
Confidence 33 2479999999999888889999999665
No 253
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-35 Score=332.29 Aligned_cols=198 Identities=22% Similarity=0.262 Sum_probs=164.8
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~-------- 509 (1374)
+.|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+.
T Consensus 5 ~~l~~~~l~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 5 PKMEARGLSFFYG-DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred cEEEEeeeEEEEC-CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 4699999999996 4679999999999999999999999999999999999974 5899999998541
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGqk 584 (1374)
.+++.++|+||++.++..|++||+.++...... ......+++.++++.+++.+. .++.+ .+||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgGq~ 155 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESA--------LGLSGGQQ 155 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCc--------ccCCHHHH
Confidence 235679999999988888999999875321110 011123567788999998543 23322 68999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||++||||++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~ 223 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYM 223 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999988865 378999999999987 57999999975
No 254
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=332.04 Aligned_cols=198 Identities=23% Similarity=0.260 Sum_probs=164.8
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~-------- 509 (1374)
..++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 6 ~~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 6 AIIETENLNLFYT-DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred ceEEEeeeEEEeC-CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 4799999999986 46799999999999999999999999999999999999997 489999998531
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChh----HHhcCCCCccccCCCCCChhHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1374)
..++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+ ..++.+ .+||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~--------~~LSgG~~ 156 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNA--------LSLSGGQQ 156 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCc--------ccCCHHHH
Confidence 2356799999999988899999998763211100 0112345677888888743 333332 68999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||++|||||+++|+++||||||++||+.+...+++.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~ 224 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLN 224 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999988765 368999999999987 56999999975
No 255
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-35 Score=331.73 Aligned_cols=199 Identities=20% Similarity=0.206 Sum_probs=165.7
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc-------
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~------- 509 (1374)
.+.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 11 ~~~l~~~~l~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~ 89 (260)
T PRK10744 11 PSKIQVRNLNFYYG-KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDI 89 (260)
T ss_pred CceEEEEEEEEEeC-CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccch
Confidence 45799999999996 4579999999999999999999999999999999999986 5899999998541
Q ss_pred -cccccEEEEecCCCCCcCCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCChh----HHhcCCCCccccCCCCCChhH
Q 000647 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGE 583 (1374)
Q Consensus 510 -~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~L~~----~~~~~~~~~~~~~g~~LSgGq 583 (1374)
.++++++|+||+|.++..|++||+.++.... .......++++.++++.+++.+ ..++.+ .+|||||
T Consensus 90 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~Gq 161 (260)
T PRK10744 90 ALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSG--------YSLSGGQ 161 (260)
T ss_pred HHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCC--------CCCCHHH
Confidence 2356899999999988899999998753211 0001112346778899998843 333333 6899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|||++||||++++|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++.+ ..+|+++++++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 230 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYL 230 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999988865 368999999999987 47999999985
No 256
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-35 Score=305.36 Aligned_cols=198 Identities=26% Similarity=0.311 Sum_probs=170.5
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 518 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v 518 (1374)
++++.+++++|++-..+++|+||+++.||+++|.||||+||||++|+|++++.|++|+|.++|.+ ...+++||.+
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl 80 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVL 80 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhccee
Confidence 36889999999875569999999999999999999999999999999999999999999999976 3467899999
Q ss_pred ecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000647 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 519 ~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1374)
+-+.-++. .|++|||.|...-.+......+.++.++.+.++|.+.+++.. ..+|-|+|||++|||||+|+|
T Consensus 81 ~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv--------~~~S~G~kqkV~iARAlvh~P 152 (245)
T COG4555 81 FGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRV--------GEFSTGMKQKVAIARALVHDP 152 (245)
T ss_pred cCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHH--------hhhchhhHHHHHHHHHHhcCC
Confidence 96665654 699999988533222222234567888999999999998854 579999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHH---hcCCEEEEEccChhhHh-hccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~l~---~~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++++|||||||||..+.+.+.+.++ +.|+++|+.||.++.++ .||+++++..
T Consensus 153 ~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~ 208 (245)
T COG4555 153 SILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHK 208 (245)
T ss_pred CeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEec
Confidence 9999999999999999988877654 46999999999999987 8999999975
No 257
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=6.2e-35 Score=332.00 Aligned_cols=198 Identities=21% Similarity=0.266 Sum_probs=167.1
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-------------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------------- 509 (1374)
+.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 4 ~~l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 82 (257)
T PRK10619 4 NKLNVIDLHKRYG-EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVA 82 (257)
T ss_pred ccEEEeeeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccc
Confidence 5699999999996 46799999999999999999999999999999999999999999999998531
Q ss_pred ------cccccEEEEecCCCCCc-CCHHHHhcCCCC-CCcccCCCCHHHHHHHHHHcCChhHH-hcCCCCccccCCCCCC
Q 000647 510 ------DLNKEIFYVPQRPYTAV-GTLRDQLIYPLT-SDQEVEPLTHGGMVELLKNVDLEYLL-DRYPPEKEINWGDELS 580 (1374)
Q Consensus 510 ------~~~~~i~~v~Q~p~l~~-~Tv~eni~~~~~-~~~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~~~~~~g~~LS 580 (1374)
.+++.++|+||+|.++. .|++||+.++.. ..........+++.++++.+++.+.. ++.+ .+||
T Consensus 83 ~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--------~~LS 154 (257)
T PRK10619 83 DKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYP--------VHLS 154 (257)
T ss_pred cchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCc--------ccCC
Confidence 22467999999999886 599999986421 10000111234677889999998764 5544 6899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 581 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 581 gGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||||++|||||+++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .||+++++++
T Consensus 155 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~ 227 (257)
T PRK10619 155 GGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQ 227 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999999999999887654 4899999999999887 5999999975
No 258
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=4e-35 Score=340.37 Aligned_cols=197 Identities=22% Similarity=0.322 Sum_probs=168.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 518 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v 518 (1374)
.++++|+++.|+ ++.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+
T Consensus 2 ~l~~~~l~~~~~-~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~ 80 (301)
T TIGR03522 2 SIRVSSLTKLYG-TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYL 80 (301)
T ss_pred EEEEEEEEEEEC-CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEe
Confidence 378999999995 4679999999999999999999999999999999999999999999999864 1245689999
Q ss_pred ecCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000647 519 PQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 519 ~Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1374)
||+|.++.. |+.||+.+.............+++.++++.++|.+..++.+ ..||||||||++||||++++|
T Consensus 81 ~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrv~la~al~~~p 152 (301)
T TIGR03522 81 PEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKI--------GQLSKGYRQRVGLAQALIHDP 152 (301)
T ss_pred cCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCch--------hhCCHHHHHHHHHHHHHhcCC
Confidence 999998865 99999976422111000112346788999999998877765 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .||+++++++
T Consensus 153 ~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~ 207 (301)
T TIGR03522 153 KVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINK 207 (301)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999988765 3799999999999775 6999999975
No 259
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=347.35 Aligned_cols=196 Identities=25% Similarity=0.309 Sum_probs=161.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-c-----c----cccc
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-S-----D----LNKE 514 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~-----~----~~~~ 514 (1374)
++++++...| +...+++|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+ . + .+++
T Consensus 29 ~~~~~~~~~~-~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~ 107 (400)
T PRK10070 29 LSKEQILEKT-GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKK 107 (400)
T ss_pred ccHHHHHhhc-CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCC
Confidence 3334443333 23358999999999999999999999999999999999999999999999864 1 1 1357
Q ss_pred EEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 515 IFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 515 i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
++||||++.++. .|++||+.++............+++.++++.++|.++.++.| .+||||||||++|||||
T Consensus 108 igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~--------~~LSgGq~QRv~LArAL 179 (400)
T PRK10070 108 IAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP--------DELSGGMRQRVGLARAL 179 (400)
T ss_pred EEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc--------ccCCHHHHHHHHHHHHH
Confidence 999999998886 599999998642211111112356778999999999888877 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+++|+++||||||++||+.+.+.+++.+++ .|+|+|+|||+++.+ +.+|++++|++
T Consensus 180 ~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~ 240 (400)
T PRK10070 180 AINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQN 240 (400)
T ss_pred hcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999887753 489999999999887 57999999985
No 260
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-35 Score=329.93 Aligned_cols=197 Identities=21% Similarity=0.328 Sum_probs=168.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ .++++.++|
T Consensus 2 ~l~~~~l~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 2 TLRTENLTVGYG-TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEEeEEEEEC-CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 478999999986 4679999999999999999999999999999999999999999999999864 123467999
Q ss_pred EecCCCCCcC-CHHHHhcCCCCCC----cccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000647 518 VPQRPYTAVG-TLRDQLIYPLTSD----QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1374)
Q Consensus 518 v~Q~p~l~~~-Tv~eni~~~~~~~----~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1374)
+||++.++.+ |+.||+.++.... .......++++.++++.+++.+..++.+ ..||||||||++||||
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~lara 152 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL--------TDLSGGQRQRAFLAMV 152 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc--------ccCCHHHHHHHHHHHH
Confidence 9999988765 9999998753210 0001112346778899999988877765 6899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 593 l~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 153 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~ 213 (255)
T PRK11231 153 LAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLAN 213 (255)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999888754 4899999999999874 7999999975
No 261
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=5.6e-35 Score=331.46 Aligned_cols=196 Identities=27% Similarity=0.351 Sum_probs=166.4
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---------------
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------------- 509 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~--------------- 509 (1374)
|+++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 1 i~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ 79 (252)
T TIGR03005 1 VRFSDVTKRFG-ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADE 79 (252)
T ss_pred CEEEEEEEEeC-CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccch
Confidence 47899999996 46799999999999999999999999999999999999999999999988531
Q ss_pred ----cccccEEEEecCCCCCc-CCHHHHhcCCCCC-CcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhH
Q 000647 510 ----DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTS-DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGE 583 (1374)
Q Consensus 510 ----~~~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~-~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGq 583 (1374)
.+++.++|+||++.++. .|+.||+.++... ........++++.++++.+++.+..++.+ .+|||||
T Consensus 80 ~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~ 151 (252)
T TIGR03005 80 KHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMP--------AQLSGGQ 151 (252)
T ss_pred hHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcCh--------hhcCHHH
Confidence 23567999999998875 7999999874211 00001112346778999999998888766 6899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|||++||||++++|+++||||||++||+.+...+.+.+++ .|+|+|+|||+++.+ ..+|++++|++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 222 (252)
T TIGR03005 152 QQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDK 222 (252)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999999999887754 389999999999988 57999999975
No 262
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-35 Score=330.43 Aligned_cols=207 Identities=27% Similarity=0.353 Sum_probs=177.8
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEe
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYV 1177 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~V 1177 (1374)
|+++|+++.|++...+++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.+. ...|..++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 80 (236)
T cd03253 1 IEFENVTFAYDPGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVV 80 (236)
T ss_pred CEEEEEEEEeCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEE
Confidence 47899999998667799999999999999999999999999999999999999999999999988765 2345679999
Q ss_pred cCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-cccCC
Q 000647 1178 PQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WEDIL 1256 (1374)
Q Consensus 1178 pQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~-~g~~L 1256 (1374)
||+|.+|++|+++|+.++... ..+.++.+.++.+++.+.++.+|.|+++..+ +...|
T Consensus 81 ~q~~~~~~~tv~~nl~~~~~~----------------------~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~L 138 (236)
T cd03253 81 PQDTVLFNDTIGYNIRYGRPD----------------------ATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKL 138 (236)
T ss_pred CCCChhhcchHHHHHhhcCCC----------------------CCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcC
Confidence 999999999999999875321 1123345566777787787888889888764 56889
Q ss_pred ChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh
Q 000647 1257 SLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD 1336 (1374)
Q Consensus 1257 SgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~ 1336 (1374)
|+|||||++| ||||+++|+++||||||++||+++.+.+.+.+++
T Consensus 139 S~G~~~rl~l------------------------------------a~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~ 182 (236)
T cd03253 139 SGGEKQRVAI------------------------------------ARAILKNPPILLLDEATSALDTHTEREIQAALRD 182 (236)
T ss_pred CHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999888776643
Q ss_pred --cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1337 --MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
.|.|+|+++|+++.+..+|+.+.+.+|.
T Consensus 183 ~~~~~tiii~sh~~~~~~~~d~~~~l~~g~ 212 (236)
T cd03253 183 VSKGRTTIVIAHRLSTIVNADKIIVLKDGR 212 (236)
T ss_pred hcCCCEEEEEcCCHHHHHhCCEEEEEECCE
Confidence 3889999999998888899999996553
No 263
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=5.5e-35 Score=333.73 Aligned_cols=198 Identities=29% Similarity=0.369 Sum_probs=164.5
Q ss_pred cEEEeeeEEEcCC--------CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------
Q 000647 444 YIEFSGVKVVTPT--------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------ 509 (1374)
Q Consensus 444 ~i~~~~v~~~~~~--------~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------ 509 (1374)
.|+++||++.|++ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 4789999999863 36799999999999999999999999999999999999999999999998541
Q ss_pred ---cccccEEEEecCCC--CC-cCCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCCh
Q 000647 510 ---DLNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSL 581 (1374)
Q Consensus 510 ---~~~~~i~~v~Q~p~--l~-~~Tv~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSg 581 (1374)
.+++.|+|+||+|. ++ ..|++||+.++.... .......++++.++++.+++. +..++.+ ..|||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--------~~LSg 153 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLP--------RQLSG 153 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCCh--------hhCCH
Confidence 13467999999983 43 469999997643211 001112345678899999996 5566544 68999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 582 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 582 GqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||||++||||++++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .+|+++++++
T Consensus 154 Ge~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~ 226 (265)
T TIGR02769 154 GQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDK 226 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeC
Confidence 999999999999999999999999999999999998887754 3899999999999886 7999999975
No 264
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4e-35 Score=325.93 Aligned_cols=208 Identities=26% Similarity=0.361 Sum_probs=178.7
Q ss_pred CCEEEeeeEEeCCCc-ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc--CCcccE
Q 000647 1098 DSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGI 1174 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~--~~r~~i 1174 (1374)
|+|+++|+++.|++. +++++|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.++|.++...+ ..++.+
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 468999999999763 67999999999999999999999999999999999999999999999999886542 345679
Q ss_pred EEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-cc
Q 000647 1175 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WE 1253 (1374)
Q Consensus 1175 ~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~-~g 1253 (1374)
+++||+|.+|..|++||+.++... ...+.+.++++.+++.+.++..|.|+++... ..
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~----------------------~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 138 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPL----------------------ADDERILRAAELAGVTDFVNKHPNGLDLQIGERG 138 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCC----------------------CCHHHHHHHHHHcCcHHHHHhccccccceecCCC
Confidence 999999999999999999765321 0122345677788888888888889998863 46
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||||||||++| |||++++|+++||||||++||.++.+.+.+.
T Consensus 139 ~~LSgG~~qrl~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~ 182 (220)
T cd03245 139 RGLSGGQRQAVAL------------------------------------ARALLNDPPILLLDEPTSAMDMNSEERLKER 182 (220)
T ss_pred ccCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCccccCCHHHHHHHHHH
Confidence 7899999999999 9999999999999999999999999988887
Q ss_pred HHh--cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1334 AKD--MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1334 ~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
+++ .++|+|+++|+++...+.|+++.+.+|
T Consensus 183 l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g 214 (220)
T cd03245 183 LRQLLGDKTLIIITHRPSLLDLVDRIIVMDSG 214 (220)
T ss_pred HHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCC
Confidence 654 248999999999888888999999654
No 265
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-35 Score=329.29 Aligned_cols=201 Identities=21% Similarity=0.227 Sum_probs=165.4
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc---CCccEEEeCCCC------cccccc
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP---LVSGHIAKPGVG------SDLNKE 514 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~---~~~G~I~~~g~~------~~~~~~ 514 (1374)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.+ ...++.
T Consensus 2 ~~~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 80 (246)
T PRK14269 2 IAKTTNLNLFYG-KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKN 80 (246)
T ss_pred ceeeeeeEEEEC-CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhh
Confidence 478999999996 4679999999999999999999999999999999999974 699999999864 123567
Q ss_pred EEEEecCCCCCcCCHHHHhcCCCCCCccc--CCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000647 515 IFYVPQRPYTAVGTLRDQLIYPLTSDQEV--EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1374)
Q Consensus 515 i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~--~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1374)
++|+||+|.++..|++||+.++....... ....++++.++++.+++.+.+.... .....+||||||||++||||
T Consensus 81 i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----~~~~~~LS~G~~qrv~lara 156 (246)
T PRK14269 81 VGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKL----KQNALALSGGQQQRLCIARA 156 (246)
T ss_pred EEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHh----cCCcccCCHHHHHHHHHHHH
Confidence 99999999999899999998753211110 1122345778899999964332110 01136899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 593 l~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++++|+++||||||++||+.+...+.+.+++ .++|+|+|||+++.+ ..+|+++++++
T Consensus 157 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~ 216 (246)
T PRK14269 157 LAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHL 216 (246)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEEC
Confidence 9999999999999999999999999988865 489999999999977 47999999985
No 266
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1e-34 Score=317.89 Aligned_cols=188 Identities=27% Similarity=0.404 Sum_probs=162.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEEe
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 519 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v~ 519 (1374)
++++|+++.|+ ++++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++++++|+|
T Consensus 1 l~i~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (201)
T cd03231 1 LEADELTCERD-GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLG 79 (201)
T ss_pred CEEEEEEEEeC-CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEec
Confidence 46899999985 4679999999999999999999999999999999999999999999999854 22456899999
Q ss_pred cCCCCC-cCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~-~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|++.++ ..|++||+.+.... ..++++.++++.+++.++.++.+ .+||||||||++||||++++|+
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral~~~p~ 145 (201)
T cd03231 80 HAPGIKTTLSVLENLRFWHAD------HSDEQVEEALARVGLNGFEDRPV--------AQLSAGQQRRVALARLLLSGRP 145 (201)
T ss_pred cccccCCCcCHHHHHHhhccc------ccHHHHHHHHHHcCChhhhcCch--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 999876 47999999875321 24567888999999988776654 5899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhh-HhhccEEEEe
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPAL-VAFHDVVLSL 647 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~-~~~~d~il~l 647 (1374)
++||||||++||+.+.+.+.+.+++ .|.|+|++||+... ...+++++++
T Consensus 146 llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 146 LWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 9999999999999999999988764 48999999998664 5678888877
No 267
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-35 Score=299.85 Aligned_cols=205 Identities=21% Similarity=0.247 Sum_probs=172.1
Q ss_pred cEEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-ccccccEEEEecC
Q 000647 444 YIEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQR 521 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~~~~~~i~~v~Q~ 521 (1374)
.+..++++..|++. ..+++|+|++|.+||.+.++||||||||||+++++|+.+|..|+|.++|.. ..-...=|.|+|+
T Consensus 3 ~l~~~~~sl~y~g~~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgaergvVFQ~ 82 (259)
T COG4525 3 MLNVSHLSLSYEGKPRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAERGVVFQN 82 (259)
T ss_pred eeehhheEEecCCcchhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCccceeEecc
Confidence 35677888888642 459999999999999999999999999999999999999999999999853 1112356999999
Q ss_pred CCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000647 522 PYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFA 600 (1374)
Q Consensus 522 p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~il 600 (1374)
+-+++ .|+.||+.|+.......+....+...+.+..+||+++-++++ .+||||||||+.|||||..+|+++
T Consensus 83 ~~LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~~~~i--------~qLSGGmrQRvGiARALa~eP~~L 154 (259)
T COG4525 83 EALLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLEGAEHKYI--------WQLSGGMRQRVGIARALAVEPQLL 154 (259)
T ss_pred CccchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCcccccccce--------EeecchHHHHHHHHHHhhcCcceE
Confidence 98776 599999999986544333334456778899999999887776 479999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHH----hcCCEEEEEccChhhHh-hccEEEEecCCCceEEe
Q 000647 601 ILDECTSAVTTDMEERFCAKVR----AMGTSCITISHRPALVA-FHDVVLSLDGEGEWRVH 656 (1374)
Q Consensus 601 lLDEptsaLD~~~~~~i~~~l~----~~~~TiI~vtH~~~~~~-~~d~il~l~~~g~~~~~ 656 (1374)
+||||++|||.-+.+++.+.+- +.|+.+++|||+.+..- .++++++|+...+..++
T Consensus 155 lLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~ 215 (259)
T COG4525 155 LLDEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVE 215 (259)
T ss_pred eecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhheeEEecCCCceeeE
Confidence 9999999999999999988764 46999999999998765 58999999875454443
No 268
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.7e-35 Score=294.52 Aligned_cols=185 Identities=27% Similarity=0.408 Sum_probs=161.0
Q ss_pred CCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCH
Q 000647 456 TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTL 529 (1374)
Q Consensus 456 ~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv 529 (1374)
++.++|+++||++.+||+++|+||||||||||+|.++-+.+|++|++++.|.+ ..+|.+++||.|.|.+|.+||
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tV 93 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTV 93 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccch
Confidence 45789999999999999999999999999999999999999999999999975 347889999999999999999
Q ss_pred HHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCC
Q 000647 530 RDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAV 609 (1374)
Q Consensus 530 ~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaL 609 (1374)
.||+.||..... ...+.....+.|+.+++.+.+-..+ ..+||||||||+||+|-|.--|+||+||||||||
T Consensus 94 eDNlifP~~~r~--rr~dr~aa~~llar~~l~~~~L~k~-------it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsAL 164 (223)
T COG4619 94 EDNLIFPWQIRN--RRPDRAAALDLLARFALPDSILTKN-------ITELSGGEKQRIALIRNLQFMPKILLLDEITSAL 164 (223)
T ss_pred hhccccchHHhc--cCCChHHHHHHHHHcCCchhhhcch-------hhhccchHHHHHHHHHHhhcCCceEEecCchhhc
Confidence 999999965432 2345667788899999977543322 2579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHH----HhcCCEEEEEccChhh-HhhccEEEEecC
Q 000647 610 TTDMEERFCAKV----RAMGTSCITISHRPAL-VAFHDVVLSLDG 649 (1374)
Q Consensus 610 D~~~~~~i~~~l----~~~~~TiI~vtH~~~~-~~~~d~il~l~~ 649 (1374)
|+.+.+.+-+.+ ++.+..++.|||+.+. +..+|+++.+..
T Consensus 165 D~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~ 209 (223)
T COG4619 165 DESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQP 209 (223)
T ss_pred ChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEecc
Confidence 999888776654 4678999999999987 788999998864
No 269
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-35 Score=331.35 Aligned_cols=199 Identities=23% Similarity=0.258 Sum_probs=164.4
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc-------
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~------- 509 (1374)
.+.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 10 ~~~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 10 QPQIKVENLNLWYG-EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred ceeEEEeeeEEEeC-CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 34799999999985 46799999999999999999999999999999999999985 799999988541
Q ss_pred -cccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChh----HHhcCCCCccccCCCCCChhHH
Q 000647 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 510 -~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1374)
.+++.++|+||++.++..|++||+.++...........++++.++++.+++.+ ..++. ...||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LSgG~~ 160 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSP--------ALSLSGGQQ 160 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCC--------hhhCCHHHH
Confidence 23567999999999888999999987532111000111235677889888843 23332 268999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||++|||||+++|+++||||||++||+.+...+++.+++ .++|+|++||+++.+ ..||++++|++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~ 228 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLM 228 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999988765 378999999999987 56999999975
No 270
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=330.27 Aligned_cols=198 Identities=19% Similarity=0.238 Sum_probs=164.9
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCC--------
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVG-------- 508 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~-------- 508 (1374)
...++++||++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+
T Consensus 11 ~~~l~i~nl~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~ 89 (269)
T PRK14259 11 NIIISLQNVTISYG-TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDP 89 (269)
T ss_pred CceEEEEeEEEEEC-CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCH
Confidence 45799999999986 4679999999999999999999999999999999999987 689999999853
Q ss_pred ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChh----HHhcCCCCccccCCCCCChhHH
Q 000647 509 SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 509 ~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1374)
.++++.++|+||+|.++..|++||+.++...... ....++++.++++.+++.. ..++. ..+||||||
T Consensus 90 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LS~G~~ 160 (269)
T PRK14259 90 VEVRRRIGMVFQQPNPFPKSIYENIAFGARINGY-TGDMDELVERSLRKAAVWDECKDKLNES--------GYSLSGGQQ 160 (269)
T ss_pred HHHhhceEEEccCCccchhhHHHHHhhhhhhcCC-cHHHHHHHHHHHHHhCCcchhhhhhCCC--------cccCCHHHH
Confidence 1235679999999998888999999886432111 1112345667788887743 23332 268999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||++|||||+++|+++||||||++||+.+.+.+++.+++ .+.|+|++||+++.+ ..+|++++|++
T Consensus 161 qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 228 (269)
T PRK14259 161 QRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNA 228 (269)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEec
Confidence 999999999999999999999999999999999988865 368999999999877 57999999985
No 271
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=329.69 Aligned_cols=197 Identities=22% Similarity=0.321 Sum_probs=166.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------c-ccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~-~~~~i~ 516 (1374)
.++++|+++.|+ ++++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .+..++
T Consensus 5 ~l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (255)
T PRK11300 5 LLSVSGLMMRFG-GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVV 83 (255)
T ss_pred eEEEeeEEEEEC-CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeE
Confidence 689999999986 46899999999999999999999999999999999999999999999998641 1 234599
Q ss_pred EEecCCCCCcC-CHHHHhcCCCCCC-------c--------ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCC
Q 000647 517 YVPQRPYTAVG-TLRDQLIYPLTSD-------Q--------EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELS 580 (1374)
Q Consensus 517 ~v~Q~p~l~~~-Tv~eni~~~~~~~-------~--------~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LS 580 (1374)
|+||+|.++.. |++||+.++.... . ........++.++++.+++.+..++.+ .+||
T Consensus 84 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS 155 (255)
T PRK11300 84 RTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQA--------GNLA 155 (255)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCCh--------hhCC
Confidence 99999998875 9999999753210 0 000011235677889999988777765 6899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---c-CCEEEEEccChhhHh-hccEEEEecC
Q 000647 581 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 581 gGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~-~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||||++||||++++|+++||||||++||+.+.+.+.+.+++ . |+|+|++||+++.+. .+|+++++++
T Consensus 156 ~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 156 YGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999887753 3 899999999999884 6999999975
No 272
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=326.78 Aligned_cols=197 Identities=23% Similarity=0.302 Sum_probs=165.4
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------c-ccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------D-LNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~-~~~~i~ 516 (1374)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. . .++.++
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 81 (241)
T PRK10895 3 TLTAKNLAKAYK-GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIG 81 (241)
T ss_pred eEEEeCcEEEeC-CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeE
Confidence 488999999986 46899999999999999999999999999999999999999999999998541 1 346799
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
|+||++.++. .|++||+.++..... ......+.++.++++.+++.+..++.+ ..||||||||++||||++
T Consensus 82 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~ 153 (241)
T PRK10895 82 YLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMG--------QSLSGGERRRVEIARALA 153 (241)
T ss_pred EeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcch--------hhCCHHHHHHHHHHHHHh
Confidence 9999998877 599999987532111 001112345778899999987766644 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHH---hcCCEEEEEccChhhH-hhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~---~~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+.+.+.+.++ +.|+|+|++||+++.+ ..+|+++++++
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 154 ANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 9999999999999999999998877665 3589999999999765 57999999975
No 273
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.1e-34 Score=318.33 Aligned_cols=191 Identities=27% Similarity=0.362 Sum_probs=164.0
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEEe
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 519 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v~ 519 (1374)
++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|++
T Consensus 2 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~ 80 (204)
T PRK13538 2 LEARNLACERD-ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLG 80 (204)
T ss_pred eEEEEEEEEEC-CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeC
Confidence 78999999985 4679999999999999999999999999999999999999999999999854 12456799999
Q ss_pred cCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|++.++. .|++||+.++..... ...++++.++++.+++.++.++.+ ..||||||||++||||++++|+
T Consensus 81 ~~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrl~la~al~~~p~ 149 (204)
T PRK13538 81 HQPGIKTELTALENLRFYQRLHG---PGDDEALWEALAQVGLAGFEDVPV--------RQLSAGQQRRVALARLWLTRAP 149 (204)
T ss_pred CccccCcCCcHHHHHHHHHHhcC---ccHHHHHHHHHHHcCCHHHhhCCh--------hhcCHHHHHHHHHHHHHhcCCC
Confidence 9987765 699999987542211 123467788999999988777654 6899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEe
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSL 647 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l 647 (1374)
++||||||++||+.+.+.+++.+++ .+.|+|++||+++++. +.++++++
T Consensus 150 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 150 LWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 9999999999999999999887764 4889999999999985 44677766
No 274
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.7e-35 Score=343.30 Aligned_cols=203 Identities=21% Similarity=0.255 Sum_probs=167.8
Q ss_pred EEEeeeEEeCCC---cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCc
Q 000647 1100 ISFSKLDIITPS---QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 1171 (1374)
Q Consensus 1100 I~f~~V~~~yp~---~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r 1171 (1374)
|+|+||++.|++ .+++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.+|..++ ..|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999998864 257999999999999999999999999999999999999999999999999998752 246
Q ss_pred ccEEEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1172 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1172 ~~i~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
++|++|||++.+|+ .|++||+.||.... +.. .....+.+.++++.++|.+..++.
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~----------~~~------~~~~~~~v~e~l~~vgL~~~~~~~-------- 137 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELD----------NTP------KDEIKRKVTELLALVGLGDKHDSY-------- 137 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHc----------CCC------HHHHHHHHHHHHHHcCCchhhhCC--------
Confidence 78999999999995 79999998764210 000 000123456788888886654433
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
..+||||||||++| ||||..+|++||||||||+||+++.+.+
T Consensus 138 --~~~LSgGqkQRV~I------------------------------------ARAL~~~P~iLLlDEPts~LD~~t~~~i 179 (343)
T TIGR02314 138 --PSNLSGGQKQRVAI------------------------------------ARALASNPKVLLCDEATSALDPATTQSI 179 (343)
T ss_pred --hhhCCHHHHHHHHH------------------------------------HHHHHhCCCEEEEeCCcccCCHHHHHHH
Confidence 46799999999999 9999999999999999999999999877
Q ss_pred HHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1331 YRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1331 ~~~~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.+++++ .|+|+|.|+|+++.+ +++|+++.|.+|+
T Consensus 180 ~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~ 218 (343)
T TIGR02314 180 LELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGE 218 (343)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 665543 489999999999877 6789999996654
No 275
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=330.78 Aligned_cols=199 Identities=19% Similarity=0.196 Sum_probs=166.1
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc-------
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~------- 509 (1374)
.+.|+++||++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 17 ~~~l~~~nl~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 17 EIKMRARDVSVFYG-EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred CceEEEEeEEEEEC-CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 35799999999996 46799999999999999999999999999999999999975 899999998541
Q ss_pred -cccccEEEEecCCCCCcCCHHHHhcCCCCCCcc--cCCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChh
Q 000647 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLG 582 (1374)
Q Consensus 510 -~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~--~~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgG 582 (1374)
.+++.++|+||+|.++..|+.||+.++...... ......+++.++++.+++.+. .++.+ .+||||
T Consensus 96 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgG 167 (267)
T PRK14235 96 VELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPG--------TGLSGG 167 (267)
T ss_pred HHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCc--------ccCCHH
Confidence 235679999999998888999999875321110 011123456788999999653 23322 689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 583 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 583 qkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+ ..+|+++++++
T Consensus 168 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~ 237 (267)
T PRK14235 168 QQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHL 237 (267)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999999999988865 368999999999988 56899999985
No 276
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9.9e-35 Score=324.99 Aligned_cols=193 Identities=25% Similarity=0.356 Sum_probs=161.5
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-------cccccEEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIFY 517 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-------~~~~~i~~ 517 (1374)
|+++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++.++|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (230)
T TIGR03410 1 LEVSNLNVYYG-QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAY 79 (230)
T ss_pred CEEEeEEEEeC-CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEE
Confidence 46899999986 46799999999999999999999999999999999999999999999998541 12457999
Q ss_pred EecCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcC-ChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 518 VPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVD-LEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 518 v~Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~-L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
+||++.++.. |++||+.++...... ...+...++++.++ +.+..++.+ .+||||||||++||||+++
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 80 VPQGREIFPRLTVEENLLTGLAALPR---RSRKIPDEIYELFPVLKEMLGRRG--------GDLSGGQQQQLAIARALVT 148 (230)
T ss_pred eccCCcccCCCcHHHHHHHHHHhcCc---chHHHHHHHHHHHHhHHHHhhCCh--------hhCCHHHHHHHHHHHHHhc
Confidence 9999998875 999999875322111 11233466677766 455555544 6899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~ 207 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMER 207 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999887764 3789999999999887 6999999975
No 277
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=6.8e-35 Score=309.06 Aligned_cols=166 Identities=53% Similarity=0.985 Sum_probs=152.0
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++||++.|++.+++++|+||+|+|||.++|+||||||||||+++|.|+++|.+|+|.++|. ++++|+||
T Consensus 1 i~~~~~~~~~~~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~---------~~i~~~~q 71 (166)
T cd03223 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG---------EDLLFLPQ 71 (166)
T ss_pred CEEEEEEEEcCCCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC---------ceEEEECC
Confidence 578999999986677999999999999999999999999999999999999999999999874 57999999
Q ss_pred CCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCChh
Q 000647 1180 RPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLG 1259 (1374)
Q Consensus 1180 ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSgG 1259 (1374)
+|.++++|++||+.++ +...||+|
T Consensus 72 ~~~~~~~tv~~nl~~~--------------------------------------------------------~~~~LS~G 95 (166)
T cd03223 72 RPYLPLGTLREQLIYP--------------------------------------------------------WDDVLSGG 95 (166)
T ss_pred CCccccccHHHHhhcc--------------------------------------------------------CCCCCCHH
Confidence 9999999999998632 12458999
Q ss_pred hhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHhcCc
Q 000647 1260 EQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKDMGI 1339 (1374)
Q Consensus 1260 QrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~~~~ 1339 (1374)
||||+++ |||++++|+++||||||++||.++.+.+.+.+++.++
T Consensus 96 ~~~rv~l------------------------------------aral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~ 139 (166)
T cd03223 96 EQQRLAF------------------------------------ARLLLHKPKFVFLDEATSALDEESEDRLYQLLKELGI 139 (166)
T ss_pred HHHHHHH------------------------------------HHHHHcCCCEEEEECCccccCHHHHHHHHHHHHHhCC
Confidence 9999999 9999999999999999999999999999887776789
Q ss_pred eEEEecCCCCchhhccceEEEEcCCCCe
Q 000647 1340 TFVTSSQRPALIPFHSLELRLIDGEGNW 1367 (1374)
Q Consensus 1340 TvI~IaHRl~~i~~~~~~l~l~~g~g~~ 1367 (1374)
|+|+|+|+++...+.|+++.+ +.+|.|
T Consensus 140 tiiivsh~~~~~~~~d~i~~l-~~~~~~ 166 (166)
T cd03223 140 TVISVGHRPSLWKFHDRVLDL-DGEGGW 166 (166)
T ss_pred EEEEEeCChhHHhhCCEEEEE-cCCCCC
Confidence 999999999988999999999 788887
No 278
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=329.67 Aligned_cols=198 Identities=21% Similarity=0.252 Sum_probs=168.2
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEE
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIF 516 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~ 516 (1374)
..|+++|+++.|+ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++
T Consensus 6 ~~l~i~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (265)
T PRK10253 6 ARLRGEQLTLGYG-KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIG 84 (265)
T ss_pred cEEEEEEEEEEEC-CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheE
Confidence 4799999999996 4679999999999999999999999999999999999999999999999864 12346799
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCCc----ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~~----~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1374)
|+||++.++. .|++||+.++..... ......++++.++++.+++.++.++.+ .+||||||||++|||
T Consensus 85 ~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~Gq~qrv~lar 156 (265)
T PRK10253 85 LLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV--------DTLSGGQRQRAWIAM 156 (265)
T ss_pred EeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc--------ccCChHHHHHHHHHH
Confidence 9999998765 699999987531110 000112346778999999998877765 689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 592 al~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|++++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|+++++++
T Consensus 157 al~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~ 219 (265)
T PRK10253 157 VLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALRE 219 (265)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999887754 378999999999876 57999999975
No 279
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.7e-34 Score=328.13 Aligned_cols=196 Identities=30% Similarity=0.401 Sum_probs=166.3
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYV 518 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v 518 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|+
T Consensus 2 l~~~~l~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (256)
T TIGR03873 2 LRLSRVSWSAG-GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALV 80 (256)
T ss_pred ceEEeEEEEEC-CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEe
Confidence 68899999985 4689999999999999999999999999999999999999999999999854 1234579999
Q ss_pred ecCCCC-CcCCHHHHhcCCCCCC-cc---cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 519 PQRPYT-AVGTLRDQLIYPLTSD-QE---VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 519 ~Q~p~l-~~~Tv~eni~~~~~~~-~~---~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
||+|.+ +..|++||+.++.... .. .....++++.++++.+++.+..++.+ ..||||||||++||||+
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al 152 (256)
T TIGR03873 81 EQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM--------STLSGGERQRVHVARAL 152 (256)
T ss_pred cccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHHHHHHHHHH
Confidence 999864 4579999998753211 00 01112346788999999988777765 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+.+|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+ ..+|++++|++
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (256)
T TIGR03873 153 AQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDG 212 (256)
T ss_pred hcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999887764 478999999999998 57999999975
No 280
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=7.3e-35 Score=325.17 Aligned_cols=210 Identities=24% Similarity=0.355 Sum_probs=170.9
Q ss_pred CCCCEEEeeeEEeCCCc--ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCc
Q 000647 1096 YQDSISFSKLDIITPSQ--KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSG 1171 (1374)
Q Consensus 1096 ~~g~I~f~~V~~~yp~~--~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r 1171 (1374)
..|.|+++|+++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...+
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 36889999999999763 5799999999999999999999999999999999999999999999999988765 2345
Q ss_pred ccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc
Q 000647 1172 CGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN 1251 (1374)
Q Consensus 1172 ~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~ 1251 (1374)
.+++|+||+|.+|++|++||+.++..... ..+++...+..++...++.++.|+++..+
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~l~~gl~~~~~ 145 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCS----------------------FECVKEAAQKAHAHSFISELASGYDTEVG 145 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCC----------------------HHHHHHHHHHcCcHHHHHhccccccchhh
Confidence 67999999999999999999987643110 00111112223334445555556665542
Q ss_pred -cccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1252 -WEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1252 -~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
...+||||||||++| |||++++|+++||||||++||.++.+.+
T Consensus 146 ~~~~~LSgG~~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l 189 (226)
T cd03248 146 EKGSQLSGGQKQRVAI------------------------------------ARALIRNPQVLILDEATSALDAESEQQV 189 (226)
T ss_pred cCCCcCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHH
Confidence 457899999999999 9999999999999999999999999988
Q ss_pred HHHHHh--cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1331 YRLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1331 ~~~~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
.+.+++ .+.|+|+|+|+++.+...|+++.|.+|
T Consensus 190 ~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g 224 (226)
T cd03248 190 QQALYDWPERRTVLVIAHRLSTVERADQILVLDGG 224 (226)
T ss_pred HHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCC
Confidence 876654 368999999999988888999998554
No 281
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.4e-34 Score=325.01 Aligned_cols=196 Identities=28% Similarity=0.404 Sum_probs=166.6
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----cccccEEEEec
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----~~~~~i~~v~Q 520 (1374)
++++|+++.|+ ++++++|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+||
T Consensus 1 i~i~~l~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q 79 (237)
T TIGR00968 1 IEIANISKRFG-SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQ 79 (237)
T ss_pred CEEEEEEEEEC-CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEec
Confidence 46899999986 46799999999999999999999999999999999999999999999998641 23467999999
Q ss_pred CCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
+|.++.+ |++||+.+.............+++.++++.+++.++.++.+ ..||+|||||++||||++++|++
T Consensus 80 ~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qrl~laral~~~p~l 151 (237)
T TIGR00968 80 HYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYP--------NQLSGGQRQRVALARALAVEPQV 151 (237)
T ss_pred ChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 9998875 99999987532211111112345678899999988777765 58999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh---c-CCEEEEEccChhhH-hhccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~---~-~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+||||||++||+++++.+.+.+++ . ++|+|++||+++.+ +.+|+++++++
T Consensus 152 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~ 206 (237)
T TIGR00968 152 LLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSN 206 (237)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEEC
Confidence 999999999999999999988764 3 79999999999986 56999999985
No 282
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=327.94 Aligned_cols=197 Identities=24% Similarity=0.294 Sum_probs=163.6
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCC------cccc
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVG------SDLN 512 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~------~~~~ 512 (1374)
.++++|+++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+ ..++
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 81 (250)
T PRK14247 3 KIEIRDLKVSFGQ-VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELR 81 (250)
T ss_pred eEEEEeeEEEECC-eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHh
Confidence 4899999999864 6799999999999999999999999999999999999974 69999999864 1345
Q ss_pred ccEEEEecCCCCC-cCCHHHHhcCCCCCCcc--cCCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhHHH
Q 000647 513 KEIFYVPQRPYTA-VGTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 585 (1374)
Q Consensus 513 ~~i~~v~Q~p~l~-~~Tv~eni~~~~~~~~~--~~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGqkQ 585 (1374)
+.++|+||+|.++ ..|++||+.++...... ......+++.++++.+++.+. .++.+ .+|||||||
T Consensus 82 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgG~~q 153 (250)
T PRK14247 82 RRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPA--------GKLSGGQQQ 153 (250)
T ss_pred ccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCc--------ccCCHHHHH
Confidence 6899999999754 57999999875321110 001123467788999998643 33333 689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 586 RlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|++||||++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYK 220 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999999999999999988865 378999999999987 47999999975
No 283
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.4e-35 Score=325.18 Aligned_cols=202 Identities=25% Similarity=0.312 Sum_probs=165.3
Q ss_pred EEEeeeEEeCCCc---ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc------CC
Q 000647 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GS 1170 (1374)
Q Consensus 1100 I~f~~V~~~yp~~---~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~------~~ 1170 (1374)
|+++||++.|++. +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 4789999998753 67999999999999999999999999999999999999999999999999887642 13
Q ss_pred cccEEEecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccc
Q 000647 1171 GCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1374)
Q Consensus 1171 r~~i~~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~ 1249 (1374)
+++++||||+|.+|.+ |++||+.++.... +. .....++.+.++++.++|.+..++.
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~------- 137 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLA----------GV------PKKERRERAEELLERVGLGDRLNHY------- 137 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhc----------CC------CHHHHHHHHHHHHHHcCCchhhhcC-------
Confidence 4679999999999987 9999997643100 00 0000123466778887775544332
Q ss_pred cccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHH
Q 000647 1250 LNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQ 1329 (1374)
Q Consensus 1250 ~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~ 1329 (1374)
...||||||||++| ||||+++|+++||||||++||+++.+.
T Consensus 138 ---~~~LS~G~~qrv~l------------------------------------a~al~~~p~lllLDEP~~~LD~~~~~~ 178 (218)
T cd03255 138 ---PSELSGGQQQRVAI------------------------------------ARALANDPKIILADEPTGNLDSETGKE 178 (218)
T ss_pred ---hhhcCHHHHHHHHH------------------------------------HHHHccCCCEEEEcCCcccCCHHHHHH
Confidence 35799999999999 999999999999999999999999988
Q ss_pred HHHHHHh----cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1330 LYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1330 l~~~~~~----~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
+.+++++ .|+|+|+|+|+++.+.+.|+++.+.+|
T Consensus 179 l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G 216 (218)
T cd03255 179 VMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDG 216 (218)
T ss_pred HHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCC
Confidence 7775543 489999999999888899999999655
No 284
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.4e-35 Score=322.81 Aligned_cols=196 Identities=22% Similarity=0.310 Sum_probs=162.4
Q ss_pred EEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecCC
Q 000647 1101 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQR 1180 (1374)
Q Consensus 1101 ~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ~ 1180 (1374)
+++||++.|++.+.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.. ...+++++|+||+
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~i~~~~q~ 79 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA-KERRKSIGYVMQD 79 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh-HHhhcceEEEecC
Confidence 367999988754679999999999999999999999999999999999999999999999998754 2345579999999
Q ss_pred C--CCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1181 P--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1181 P--~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
| .+|..|++||+.++.... ....+++.++++.+++.+..++. ...|||
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~~--------------------~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 129 (205)
T cd03226 80 VDYQLFTDSVREELLLGLKEL--------------------DAGNEQAETVLKDLDLYALKERH----------PLSLSG 129 (205)
T ss_pred hhhhhhhccHHHHHhhhhhhc--------------------CccHHHHHHHHHHcCCchhcCCC----------chhCCH
Confidence 8 467889999998653210 01123467788888886554433 246999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| ||||+++|+++||||||++||.++.+.+.+.+++
T Consensus 130 G~~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~ 173 (205)
T cd03226 130 GQKQRLAI------------------------------------AAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELA 173 (205)
T ss_pred HHHHHHHH------------------------------------HHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999887776543
Q ss_pred -cCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1337 -MGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1337 -~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
.|+|+|+++|+++.+. +.|+++.|.+|
T Consensus 174 ~~~~tii~~sH~~~~~~~~~d~i~~l~~G 202 (205)
T cd03226 174 AQGKAVIVITHDYEFLAKVCDRVLLLANG 202 (205)
T ss_pred HCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 4899999999997764 78999999655
No 285
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=324.37 Aligned_cols=195 Identities=18% Similarity=0.223 Sum_probs=163.2
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-------cccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-------~~~~~i~ 516 (1374)
.++++|+++.|+ ++++++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++
T Consensus 5 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 5 MLSFDKVSAHYG-KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred EEEEEeEEEeeC-CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 689999999986 46799999999999999999999999999999999999999999999998641 1346799
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHc-CChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNV-DLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~-~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
|+||++.++. .|++||+.++..... ....++++.++++.+ ++.+..++.+ ..||||||||++||||++
T Consensus 84 ~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~ 153 (237)
T PRK11614 84 IVPEGRRVFSRMTVEENLAMGGFFAE--RDQFQERIKWVYELFPRLHERRIQRA--------GTMSGGEQQMLAIGRALM 153 (237)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccC--hhHHHHHHHHHHHHHHHHHHHHhCch--------hhCCHHHHHHHHHHHHHH
Confidence 9999998887 499999987532111 011233456667776 4666555544 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ +.+|+++++++
T Consensus 154 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (237)
T PRK11614 154 SQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLEN 212 (237)
T ss_pred hCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeC
Confidence 99999999999999999999999887753 489999999999865 67999999985
No 286
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=338.00 Aligned_cols=199 Identities=25% Similarity=0.336 Sum_probs=166.0
Q ss_pred CcEEEeeeEEEcCC---------CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----
Q 000647 443 NYIEFSGVKVVTPT---------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~---------~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---- 509 (1374)
..|+++|+++.|+. ...+++|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|.+.
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 46899999998863 24799999999999999999999999999999999999999999999998641
Q ss_pred -----cccccEEEEecCCC--CCc-CCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCC
Q 000647 510 -----DLNKEIFYVPQRPY--TAV-GTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDEL 579 (1374)
Q Consensus 510 -----~~~~~i~~v~Q~p~--l~~-~Tv~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~L 579 (1374)
.++++|+||||+|. +.. .|+.+|+.++.... ........+++.++++.++|. +..++.| .+|
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p--------~~L 155 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYP--------HMF 155 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCC--------ccC
Confidence 24568999999994 433 59999886542111 001112235678899999996 4667766 689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 580 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 580 SgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||||||++|||||+.+|++||+||||++||..+...+++.+++ .|.|+|+||||++.+. .+|++++|.+
T Consensus 156 SgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~ 230 (327)
T PRK11308 156 SGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYL 230 (327)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999887754 4899999999999986 6999999975
No 287
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.8e-34 Score=315.70 Aligned_cols=187 Identities=23% Similarity=0.327 Sum_probs=161.9
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEEe
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 519 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v~ 519 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+|
T Consensus 2 l~~~~l~~~~~-~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i~~~~ 80 (200)
T PRK13540 2 LDVIELDFDYH-DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQLCFVG 80 (200)
T ss_pred EEEEEEEEEeC-CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhheEEec
Confidence 78999999986 4679999999999999999999999999999999999999999999999864 12456899999
Q ss_pred cCCCCC-cCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~-~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|++.++ ..|++||+.++.... ..+.++.++++.+++.+..++.+ .+||||||||++||||++++|+
T Consensus 81 q~~~~~~~~tv~~~~~~~~~~~-----~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 81 HRSGINPYLTLRENCLYDIHFS-----PGAVGITELCRLFSLEHLIDYPC--------GLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred cccccCcCCCHHHHHHHHHhcC-----cchHHHHHHHHHcCCchhhhCCh--------hhcCHHHHHHHHHHHHHhcCCC
Confidence 999886 579999998763211 12346788999999987666543 5799999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhhccEEE
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVL 645 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~~d~il 645 (1374)
++||||||++||+.+.+.+.+.+++ .|.|+|++||+...+..+|...
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~ 197 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEE 197 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhh
Confidence 9999999999999999999988764 4899999999999998888654
No 288
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=6.5e-35 Score=338.96 Aligned_cols=185 Identities=25% Similarity=0.278 Sum_probs=157.7
Q ss_pred CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEEecCCCCCcC-CHH
Q 000647 457 GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVPQRPYTAVG-TLR 530 (1374)
Q Consensus 457 ~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v~Q~p~l~~~-Tv~ 530 (1374)
++++|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+ ..++++++|+||++.++.. |++
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHH
Confidence 4679999999999999999999999999999999999999999999999864 1245679999999988765 999
Q ss_pred HHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCC
Q 000647 531 DQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVT 610 (1374)
Q Consensus 531 eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD 610 (1374)
||+.+............++++.++++.++|.+..++.+ .+||||||||++|||||+++|+++||||||++||
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD 156 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPV--------GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLD 156 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCch--------hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCC
Confidence 99987422111101112346788999999988777755 6899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 611 TDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 611 ~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+.+.+.+.+.+++ .|+|+|++||+++.+. .||++++|++
T Consensus 157 ~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~ 199 (302)
T TIGR01188 157 PRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDH 199 (302)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEEC
Confidence 9999999887764 4899999999999885 6999999975
No 289
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.8e-34 Score=308.22 Aligned_cols=160 Identities=34% Similarity=0.590 Sum_probs=145.9
Q ss_pred EEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
++++|+++.|+++ +++++++||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ ..+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 4689999999753 569999999999999999999999999999999999999999999999854 124578999
Q ss_pred EecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000647 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 518 v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1374)
++|+|.++..|++||+ ||||||||++||||++++|
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------------LS~G~~qrv~la~al~~~p 115 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------------LSGGQRQRLGLARALYGNP 115 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------------cCHHHHHHHHHHHHHhcCC
Confidence 9999988888999886 8999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhhccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+..+|+++++++
T Consensus 116 ~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~ 170 (173)
T cd03246 116 RILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLED 170 (173)
T ss_pred CEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999887754 47899999999999989999999975
No 290
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.9e-34 Score=309.65 Aligned_cols=163 Identities=29% Similarity=0.438 Sum_probs=148.1
Q ss_pred EEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEE
Q 000647 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYV 518 (1374)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v 518 (1374)
++++|+++.|++. +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 4689999998754 479999999999999999999999999999999999999999999999864 1245679999
Q ss_pred ecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 519 PQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 519 ~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
||+|.++..|++||+ + ..||||||||++||||++++|+
T Consensus 81 ~q~~~~~~~tv~~~i----------------------------------~--------~~LS~G~~qrv~laral~~~p~ 118 (178)
T cd03247 81 NQRPYLFDTTLRNNL----------------------------------G--------RRFSGGERQRLALARILLQDAP 118 (178)
T ss_pred ccCCeeecccHHHhh----------------------------------c--------ccCCHHHHHHHHHHHHHhcCCC
Confidence 999998888999987 2 4799999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
++||||||++||+.+.+.+++.+++ .+.|+|++||+++.+..+|+++++++
T Consensus 119 ~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~ 171 (178)
T cd03247 119 IVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLEN 171 (178)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 9999999999999999999988865 47899999999999999999999975
No 291
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.3e-34 Score=320.50 Aligned_cols=192 Identities=28% Similarity=0.298 Sum_probs=165.7
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc--cccccEEEEecCC
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--DLNKEIFYVPQRP 522 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~--~~~~~i~~v~Q~p 522 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .-.+.++|+||++
T Consensus 1 l~l~~v~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~~ 79 (223)
T TIGR03740 1 LETKNLSKRFG-KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIESP 79 (223)
T ss_pred CEEEeEEEEEC-CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCCC
Confidence 46899999886 46799999999999999999999999999999999999999999999998641 1125799999999
Q ss_pred CCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000647 523 YTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 601 (1374)
Q Consensus 523 ~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ill 601 (1374)
.++. .|++||+.++.... ...+.++.++++.+++++..++.+ .+||||||||++||||++.+|++++
T Consensus 80 ~~~~~~t~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~~rv~laral~~~p~lll 147 (223)
T TIGR03740 80 PLYENLTARENLKVHTTLL----GLPDSRIDEVLNIVDLTNTGKKKA--------KQFSLGMKQRLGIAIALLNHPKLLI 147 (223)
T ss_pred CccccCCHHHHHHHHHHHc----CCCHHHHHHHHHHcCCcHHHhhhH--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8776 69999997643211 123457788999999998877755 5899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 602 LDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 602 LDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|||||++||+.+.+.+.+.+++ .|.|+|++||+++.+ ..+|+++++++
T Consensus 148 lDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 199 (223)
T TIGR03740 148 LDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISE 199 (223)
T ss_pred ECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeC
Confidence 9999999999999999888764 478999999999987 57999999975
No 292
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.5e-34 Score=341.23 Aligned_cols=186 Identities=27% Similarity=0.330 Sum_probs=158.8
Q ss_pred CCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCC----C------cc---c-cccEEEEecC
Q 000647 456 TGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV----G------SD---L-NKEIFYVPQR 521 (1374)
Q Consensus 456 ~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~----~------~~---~-~~~i~~v~Q~ 521 (1374)
+...+++|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|. + .. . +++|+||||+
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~ 114 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQK 114 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECC
Confidence 3457899999999999999999999999999999999999999999999984 2 01 1 2579999999
Q ss_pred CCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000647 522 PYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFA 600 (1374)
Q Consensus 522 p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~il 600 (1374)
+.+++ .|++||+.|+............+++.++++.++|.++.++.| .+||||||||++|||||+++|+++
T Consensus 115 ~~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~--------~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 115 FALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP--------GELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CcCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99887 699999998743211111112346788999999998888876 589999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 601 ILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 601 lLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|||||||+||+.+...+++.+.+ .++|+|+|||+++.+ +.+|+|++|++
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~ 240 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEG 240 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999887753 389999999999986 67999999986
No 293
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.4e-34 Score=320.95 Aligned_cols=204 Identities=18% Similarity=0.278 Sum_probs=171.0
Q ss_pred EEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc------CCcccE
Q 000647 1101 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GSGCGI 1174 (1374)
Q Consensus 1101 ~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~------~~r~~i 1174 (1374)
...|+.|.||..+++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+ ..|..+
T Consensus 2 ~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 81 (218)
T cd03290 2 QVTNGYFSWGSGLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYSV 81 (218)
T ss_pred eeeeeEEecCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcceE
Confidence 46788999987788999999999999999999999999999999999999999999999998876532 235679
Q ss_pred EEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-cc
Q 000647 1175 FYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WE 1253 (1374)
Q Consensus 1175 ~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~-~g 1253 (1374)
+|+||+|.+|+.|++||+.++.... +++.+++++.+++.+.++..|.|+++..+ ..
T Consensus 82 ~~~~q~~~~~~~t~~~nl~~~~~~~-----------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 138 (218)
T cd03290 82 AYAAQKPWLLNATVEENITFGSPFN-----------------------KQRYKAVTDACSLQPDIDLLPFGDQTEIGERG 138 (218)
T ss_pred EEEcCCCccccccHHHHHhhcCcCC-----------------------HHHHHHHHHHhCcHHHHHhCcCccccCcccCC
Confidence 9999999999999999998753211 12234556667777777777888887653 46
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH-
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR- 1332 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~- 1332 (1374)
..||+|||||++| |||++++|+++||||||++||.++.+.+.+
T Consensus 139 ~~LS~G~~qrv~l------------------------------------aral~~~p~illlDEPt~~LD~~~~~~l~~~ 182 (218)
T cd03290 139 INLSGGQRQRICV------------------------------------ARALYQNTNIVFLDDPFSALDIHLSDHLMQE 182 (218)
T ss_pred CcCCHHHHHHHHH------------------------------------HHHHhhCCCEEEEeCCccccCHHHHHHHHHH
Confidence 7899999999999 999999999999999999999998876554
Q ss_pred -H---HHhcCceEEEecCCCCchhhccceEEEEcC
Q 000647 1333 -L---AKDMGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1333 -~---~~~~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
+ .++.|.|+|.++|+++.+...++.+.+.+|
T Consensus 183 ~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G 217 (218)
T cd03290 183 GILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDG 217 (218)
T ss_pred HHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCC
Confidence 2 234589999999999888999988888544
No 294
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.7e-34 Score=322.05 Aligned_cols=198 Identities=25% Similarity=0.372 Sum_probs=164.7
Q ss_pred cEEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc---CCccEEEeCCCC---cccccc
Q 000647 444 YIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP---LVSGHIAKPGVG---SDLNKE 514 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~---~~~G~I~~~g~~---~~~~~~ 514 (1374)
.+.++||++.||+. +++++|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.+ ...++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKC 82 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhccc
Confidence 36799999999864 689999999999999999999999999999999999999 999999999864 234678
Q ss_pred EEEEecCCCCCcC-CHHHHhcCCCCCC--c-ccCCCCHHHHHH-HHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHH
Q 000647 515 IFYVPQRPYTAVG-TLRDQLIYPLTSD--Q-EVEPLTHGGMVE-LLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 515 i~~v~Q~p~l~~~-Tv~eni~~~~~~~--~-~~~~~~~~~~~~-~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
++|+||++.++.+ |++||+.++.... . ........++.+ .++.+++.+..++.+ ..||||||||++|
T Consensus 83 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~l 154 (226)
T cd03234 83 VAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV--------KGISGGERRRVSI 154 (226)
T ss_pred EEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc--------cCcCHHHHHHHHH
Confidence 9999999998876 9999998753211 0 001111123444 788888877666544 6899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccCh--hhHhhccEEEEecC
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRP--ALVAFHDVVLSLDG 649 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~--~~~~~~d~il~l~~ 649 (1374)
|||++++|+++||||||++||+.+...+.+.+++ .+.|+|++||++ +....+|+++++++
T Consensus 155 aral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~ 219 (226)
T cd03234 155 AVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS 219 (226)
T ss_pred HHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999888764 478999999997 45678999999985
No 295
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.5e-34 Score=317.92 Aligned_cols=195 Identities=23% Similarity=0.302 Sum_probs=165.9
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC---ccccccEEEEe
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG---SDLNKEIFYVP 519 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~---~~~~~~i~~v~ 519 (1374)
..++++|+++.|+ ++++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|++
T Consensus 10 ~~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~~~ 88 (214)
T PRK13543 10 PLLAAHALAFSRN-EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAYLG 88 (214)
T ss_pred ceEEEeeEEEecC-CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEEee
Confidence 4699999999985 4579999999999999999999999999999999999999999999999864 12345699999
Q ss_pred cCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|+|.++.. |++||+.++..... ...++.+.++++.+++.+..++.+ ..||||||||++|||+++++|+
T Consensus 89 q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~ 157 (214)
T PRK13543 89 HLPGLKADLSTLENLHFLCGLHG---RRAKQMPGSALAIVGLAGYEDTLV--------RQLSAGQKKRLALARLWLSPAP 157 (214)
T ss_pred cCcccccCCcHHHHHHHHHHhcC---CcHHHHHHHHHHHcCChhhccCCh--------hhCCHHHHHHHHHHHHHhcCCC
Confidence 99988875 99999976432111 112345678899999987766654 5899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
++||||||++||+++.+.+.+.+++ .|.|+|++||+++.+ ..+|+++.++.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 158 LWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999887754 489999999999987 57899998863
No 296
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-34 Score=323.80 Aligned_cols=196 Identities=23% Similarity=0.356 Sum_probs=166.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----cccccEEEEec
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----~~~~~i~~v~Q 520 (1374)
|+++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+++|.+|+|.++|.+. ..++.++|+||
T Consensus 1 l~~~~l~~~~~~-~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (232)
T cd03300 1 IELENVSKFYGG-FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQ 79 (232)
T ss_pred CEEEeEEEEeCC-eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEec
Confidence 468999999864 6799999999999999999999999999999999999999999999998641 13468999999
Q ss_pred CCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
+|.++.+ |++||+.++...........++++.++++.++++++.++.+ ..||||||||++||||++++|++
T Consensus 80 ~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~lS~G~~qrl~laral~~~p~l 151 (232)
T cd03300 80 NYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP--------SQLSGGQQQRVAIARALVNEPKV 151 (232)
T ss_pred ccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh--------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 9998865 99999986432111001112446778899999998888776 58999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+||||||++||+.+.+.+++.+++ .|+|+|++||+++.+ ..+|+++++++
T Consensus 152 lllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~ 206 (232)
T cd03300 152 LLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNK 206 (232)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 999999999999999999887754 389999999999987 46999999975
No 297
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8.4e-35 Score=321.94 Aligned_cols=202 Identities=23% Similarity=0.262 Sum_probs=163.9
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCcccE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r~~i 1174 (1374)
|+++||++.|++.+.+++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+ ..|+++
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 478999999976567999999999999999999999999999999999999999999999999886542 245679
Q ss_pred EEecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1175 FYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1175 ~~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
++|||+|.+|.+ |++||+.++.... +. ..+..++.+.++++.+++.....+. .
T Consensus 81 ~~v~q~~~~~~~~t~~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 134 (214)
T cd03292 81 GVVFQDFRLLPDRNVYENVAFALEVT----------GV------PPREIRKRVPAALELVGLSHKHRAL----------P 134 (214)
T ss_pred EEEecCchhccCCcHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHHcCCHHHhhCC----------h
Confidence 999999999985 9999997652100 00 0000123456778877775544332 2
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||+|||||++| |||++++|+++||||||++||.++.+.+.+.
T Consensus 135 ~~LS~G~~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~~~~~ 178 (214)
T cd03292 135 AELSGGEQQRVAI------------------------------------ARAIVNSPTILIADEPTGNLDPDTTWEIMNL 178 (214)
T ss_pred hhcCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHH
Confidence 4699999999999 9999999999999999999999999887776
Q ss_pred HHh---cCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1334 AKD---MGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1334 ~~~---~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
+++ .|+|+|+|+|++..+. +.|+++.|.+|
T Consensus 179 l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G 212 (214)
T cd03292 179 LKKINKAGTTVVVATHAKELVDTTRHRVIALERG 212 (214)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 543 4899999999997775 57888998654
No 298
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=7e-35 Score=316.43 Aligned_cols=175 Identities=26% Similarity=0.318 Sum_probs=146.6
Q ss_pred CCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc--------cccccEEEEecCC--CC
Q 000647 455 PTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--------DLNKEIFYVPQRP--YT 524 (1374)
Q Consensus 455 ~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~--------~~~~~i~~v~Q~p--~l 524 (1374)
++++.+++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|+||+| .+
T Consensus 2 ~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 2 PGGPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred CCccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 3456799999999999999999999999999999999999999999999998541 2346799999998 46
Q ss_pred CcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000647 525 AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDE 604 (1374)
Q Consensus 525 ~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDE 604 (1374)
+..|++||+.++............+++.++++.+++.+..++.+ .+||||||||++|||||+++|+++||||
T Consensus 82 ~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNLGLSEAEVERRVREALTAVGASGLRERPT--------HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCchhhhhCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 67899999987532111000112345778899999998887766 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhh
Q 000647 605 CTSAVTTDMEERFCAKVRA---MGTSCITISHRPAL 637 (1374)
Q Consensus 605 ptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~ 637 (1374)
||++||+.+.+.+.+.+++ .|+|+|++||+++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 9999999999999888764 48999999999864
No 299
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=320.79 Aligned_cols=201 Identities=25% Similarity=0.314 Sum_probs=163.4
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++......+++++||||
T Consensus 1 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q 79 (213)
T cd03259 1 LELKGLSKTYGS-VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQ 79 (213)
T ss_pred CeeeeeEEEeCC-eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcC
Confidence 478999999865 6799999999999999999999999999999999999999999999999988765444568999999
Q ss_pred CCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
+|.+|. .|++||+.++.... +. .....++.+.++++.+++.+...+. ...|||
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LSg 133 (213)
T cd03259 80 DYALFPHLTVAENIAFGLKLR----------GV------PKAEIRARVRELLELVGLEGLLNRY----------PHELSG 133 (213)
T ss_pred chhhccCCcHHHHHHhHHHHc----------CC------CHHHHHHHHHHHHHHcCChhhhhcC----------hhhCCH
Confidence 999886 59999997542100 00 0000123456677877776544332 356999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| ||||+++|+++||||||++||.++.+.+.+.+++
T Consensus 134 G~~qrl~l------------------------------------a~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~ 177 (213)
T cd03259 134 GQQQRVAL------------------------------------ARALAREPSLLLLDEPLSALDAKLREELREELKELQ 177 (213)
T ss_pred HHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999887776543
Q ss_pred --cCceEEEecCCCCc-hhhccceEEEEcC
Q 000647 1337 --MGITFVTSSQRPAL-IPFHSLELRLIDG 1363 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~-i~~~~~~l~l~~g 1363 (1374)
.|+|+|+|+|+++. .++.|+++.|.+|
T Consensus 178 ~~~~~tii~~sH~~~~~~~~~d~v~~l~~G 207 (213)
T cd03259 178 RELGITTIYVTHDQEEALALADRIAVMNEG 207 (213)
T ss_pred HHcCCEEEEEecCHHHHHHhcCEEEEEECC
Confidence 48999999999975 4678999999655
No 300
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=325.94 Aligned_cols=197 Identities=25% Similarity=0.291 Sum_probs=163.8
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc--------c
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS--------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~--------~ 510 (1374)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~ 82 (251)
T PRK14251 4 IISAKDVHLSYG-NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVE 82 (251)
T ss_pred eEEEEeeEEEEC-CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHH
Confidence 589999999986 4679999999999999999999999999999999999997 4799999998641 2
Q ss_pred ccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCh----hHHhcCCCCccccCCCCCChhHHH
Q 000647 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQQ 585 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~----~~~~~~~~~~~~~~g~~LSgGqkQ 585 (1374)
+++.++|++|+|.++..|++||+.++....... ....+.++.++++.+++. +..++. ..+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~Gq~q 154 (251)
T PRK14251 83 LRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRN--------AQAFSGGQQQ 154 (251)
T ss_pred hhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccC--------hhhCCHHHHH
Confidence 356799999999998899999998753211110 011234567788888884 223332 2689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 586 RlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|++||||++++|+++||||||++||+.+.+.+.+.+++ .+.|+|+|||+++.+. .+|++++|++
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~ 221 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMN 221 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEEC
Confidence 99999999999999999999999999999999988865 3789999999999865 6999999975
No 301
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.4e-34 Score=328.70 Aligned_cols=199 Identities=25% Similarity=0.352 Sum_probs=163.4
Q ss_pred CcEEEeeeEEEcCC--------CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-----
Q 000647 443 NYIEFSGVKVVTPT--------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~--------~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----- 509 (1374)
..|+++||++.|++ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~ 82 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDY 82 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCch
Confidence 36899999998852 24799999999999999999999999999999999999999999999998541
Q ss_pred -cccccEEEEecCCC--CCc-CCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhH
Q 000647 510 -DLNKEIFYVPQRPY--TAV-GTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGE 583 (1374)
Q Consensus 510 -~~~~~i~~v~Q~p~--l~~-~Tv~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGq 583 (1374)
..++.++|+||+|. ++. .|+.+|+.++..... .......+++.++++.+++. +..++.+ .+|||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G~ 154 (267)
T PRK15112 83 SYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYP--------HMLAPGQ 154 (267)
T ss_pred hhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCc--------hhcCHHH
Confidence 12357999999984 333 489999876422110 00111234677899999994 5555544 5899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||++||||++++|+++||||||++||+.+.+.+.+.+++ .|.|+|++||+++.+. .+|+++++++
T Consensus 155 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~ 225 (267)
T PRK15112 155 KQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQ 225 (267)
T ss_pred HHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999999999887764 3889999999999987 5999999975
No 302
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=327.02 Aligned_cols=197 Identities=26% Similarity=0.335 Sum_probs=163.5
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC--ccc-cccEEEEec
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--SDL-NKEIFYVPQ 520 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~--~~~-~~~i~~v~Q 520 (1374)
.++++|+++.|++++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ... ++.++|+||
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v~q 85 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYVPQ 85 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEecc
Confidence 58999999999766789999999999999999999999999999999999999999999999864 112 246999999
Q ss_pred CCCC---CcCCHHHHhcCCCCCC----cccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 521 RPYT---AVGTLRDQLIYPLTSD----QEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 521 ~p~l---~~~Tv~eni~~~~~~~----~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
+|.+ +..++++|+.++.... ........+++.++++.+++.+..++.+ .+||||||||++|||||
T Consensus 86 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgG~~qrv~laraL 157 (272)
T PRK15056 86 SEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI--------GELSGGQKKRVFLARAI 157 (272)
T ss_pred ccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc--------ccCCHHHHHHHHHHHHH
Confidence 9865 3457899987642110 0000112345678899999988777655 58999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEec
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLD 648 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~ 648 (1374)
+++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|+++.++
T Consensus 158 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~~ 216 (272)
T PRK15056 158 AQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMVK 216 (272)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEC
Confidence 999999999999999999999999888754 489999999999876 5789997773
No 303
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.2e-34 Score=320.73 Aligned_cols=202 Identities=24% Similarity=0.323 Sum_probs=164.7
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCcccE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r~~i 1174 (1374)
|+++|+++.|+.++.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..++++
T Consensus 2 l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (214)
T TIGR02673 2 IEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRRI 81 (214)
T ss_pred EEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhhe
Confidence 789999999965568999999999999999999999999999999999999999999999999887642 245689
Q ss_pred EEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1175 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1175 ~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
+|+||+|.+|. .|+++|+.++... .+. .....++.++++++.+++.+...+. .
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 135 (214)
T TIGR02673 82 GVVFQDFRLLPDRTVYENVALPLEV----------RGK------KEREIQRRVGAALRQVGLEHKADAF----------P 135 (214)
T ss_pred EEEecChhhccCCcHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHHcCChhhhhCC----------h
Confidence 99999999986 6999999754210 000 0001133466788888875544332 2
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||||||||++| ||||+++|+++||||||++||.++.+.+.+.
T Consensus 136 ~~LS~G~~qrl~l------------------------------------a~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 179 (214)
T TIGR02673 136 EQLSGGEQQRVAI------------------------------------ARAIVNSPPLLLADEPTGNLDPDLSERILDL 179 (214)
T ss_pred hhCCHHHHHHHHH------------------------------------HHHHhCCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 4699999999999 9999999999999999999999999888776
Q ss_pred HHh---cCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1334 AKD---MGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1334 ~~~---~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
+++ .|+|+|+|+|++..+. +.|+++.+.+|
T Consensus 180 l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 180 LKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCC
Confidence 653 4899999999997665 67899988654
No 304
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=6.7e-34 Score=321.38 Aligned_cols=185 Identities=31% Similarity=0.422 Sum_probs=162.4
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCC
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY 523 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~ 523 (1374)
.++++|+++.|+ ++++++++||+|++||+++|+||||||||||+++|+|+++|++|+|.+++ +..++|+||+|.
T Consensus 4 ~l~~~~l~~~~~-~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----~~~i~~v~q~~~ 77 (251)
T PRK09544 4 LVSLENVSVSFG-QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----KLRIGYVPQKLY 77 (251)
T ss_pred EEEEeceEEEEC-CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----ccCEEEeccccc
Confidence 689999999986 46799999999999999999999999999999999999999999999986 247999999997
Q ss_pred CCc---CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000647 524 TAV---GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFA 600 (1374)
Q Consensus 524 l~~---~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~il 600 (1374)
++. .|+++++.+.. ...++++.++++.+++.+..++.+ ..||||||||++||||++++|+++
T Consensus 78 ~~~~l~~~~~~~~~~~~-------~~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qrv~laral~~~p~ll 142 (251)
T PRK09544 78 LDTTLPLTVNRFLRLRP-------GTKKEDILPALKRVQAGHLIDAPM--------QKLSGGETQRVLLARALLNRPQLL 142 (251)
T ss_pred cccccChhHHHHHhccc-------cccHHHHHHHHHHcCChHHHhCCh--------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 754 38888875421 123456788999999998888765 689999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHh---c-CCEEEEEccChhhH-hhccEEEEecC
Q 000647 601 ILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 601 lLDEptsaLD~~~~~~i~~~l~~---~-~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||||||++||+.+...+++.+++ . |+|+|++||+++.+ ..+|+++++++
T Consensus 143 lLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~ 196 (251)
T PRK09544 143 VLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH 196 (251)
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC
Confidence 99999999999999999887753 2 89999999999987 57999999964
No 305
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=327.45 Aligned_cols=199 Identities=22% Similarity=0.243 Sum_probs=165.9
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc-------
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~------- 509 (1374)
...++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 18 ~~~l~~~nl~~~~~-~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 18 EIALSTKDLHVYYG-KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred CeEEEEeeEEEEEC-CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 45799999999985 5789999999999999999999999999999999999996 5899999998541
Q ss_pred -cccccEEEEecCCCCCcCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhH
Q 000647 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGE 583 (1374)
Q Consensus 510 -~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGq 583 (1374)
..++.++|+||+|.++..|++||+.++...... .....++++.++++.+++.+. .++. ..+|||||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--------~~~LS~G~ 168 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKS--------ALTLSGGQ 168 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCC--------cccCCHHH
Confidence 235679999999998889999999876322111 011123456778899988543 3332 26899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|||++||||++++|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++.+ ..||++++|++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~ 237 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYL 237 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999999999888765 368999999999887 57999999975
No 306
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=327.54 Aligned_cols=198 Identities=23% Similarity=0.265 Sum_probs=163.9
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~-------- 509 (1374)
..++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+.
T Consensus 20 ~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 20 HILEVKDLSIYYG-EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred ceEEEEEEEEEeC-CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 4699999999996 4679999999999999999999999999999999999864 7899999998541
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCh----hHHhcCCCCccccCCCCCChhHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~----~~~~~~~~~~~~~~g~~LSgGqk 584 (1374)
.+++.++|+||+|.++.+|++||+.++....... ....++.+.++++.+++. +..++.+ .+||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LSgGq~ 170 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSA--------LSLSGGQQ 170 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCc--------ccCCHHHH
Confidence 2356799999999998899999998753211110 011234566788888874 3334433 68999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||++|||||+++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+ ..+|++++|++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~ 238 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLN 238 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999988865 368999999999876 57999999975
No 307
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=336.92 Aligned_cols=202 Identities=19% Similarity=0.212 Sum_probs=164.7
Q ss_pred CCEEEeeeEEeCCCc----ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc------
Q 000647 1098 DSISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------ 1167 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~----~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~------ 1167 (1374)
..|+++||++.|+.. +++|+|+||+|++||.+||+|+||||||||+++|.|+++|.+|+|.++|.++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 358999999999752 4799999999999999999999999999999999999999999999999887542
Q ss_pred ------------cCCcccEEEecCCC--CCCCcchHHHhccCCC---hhHHHHHHHhhccCCCcccccCCCChHHHHHHH
Q 000647 1168 ------------AGSGCGIFYVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTIL 1230 (1374)
Q Consensus 1168 ------------~~~r~~i~~VpQ~P--~Lf~GTlR~Nl~yp~~---~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L 1230 (1374)
..+|++|+||||+| .+|++|++|||.++.. .++++ ......+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~-------------------~~~~~~~~l 160 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSE-------------------AKKLAKFYL 160 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHH-------------------HHHHHHHHH
Confidence 23467899999999 7899999999987531 11110 012244566
Q ss_pred HhCCCc-hhhhhhccCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCccccccccccc
Q 000647 1231 EGVRLS-YLLEREEVGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHK 1309 (1374)
Q Consensus 1231 ~~v~L~-~~v~~~~~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~ 1309 (1374)
+.++|. .+..+ ...+||||||||++| ||||+++
T Consensus 161 ~~~gL~~~~~~~----------~~~~LSgGqkqRvai------------------------------------AraL~~~ 194 (320)
T PRK13631 161 NKMGLDDSYLER----------SPFGLSGGQKRRVAI------------------------------------AGILAIQ 194 (320)
T ss_pred HHcCCChhHhcC----------CcccCCHHHHHHHHH------------------------------------HHHHHcC
Confidence 777664 22222 346799999999999 9999999
Q ss_pred CcEEEeeccCCCCCHHHHHHHHHHHH---hcCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1310 PKFGILDECTNATSVDVEEQLYRLAK---DMGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1310 PkillLDEaTSaLD~~~e~~l~~~~~---~~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
|++||||||||+||..+++.+.++++ ..|+|+|+|+|+++.+ .+.|+++.|.+|+
T Consensus 195 p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 195 PEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred CCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999988877654 2589999999999865 7899999996654
No 308
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.2e-34 Score=325.04 Aligned_cols=197 Identities=24% Similarity=0.305 Sum_probs=160.7
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCC--cCCccEEEeCCCCc------c-ccccE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPGVGS------D-LNKEI 515 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~--~~~~G~I~~~g~~~------~-~~~~i 515 (1374)
|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+. +|++|+|.++|.+. . .+..+
T Consensus 1 l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 79 (243)
T TIGR01978 1 LKIKDLHVSVE-DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGL 79 (243)
T ss_pred CeEeeEEEEEC-CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccce
Confidence 46899999996 467999999999999999999999999999999999994 79999999998641 1 23459
Q ss_pred EEEecCCCCCcC-CHHHHhcCCCCCCcc-------cCCCCHHHHHHHHHHcCChh-HHhcCCCCccccCCCCCChhHHHH
Q 000647 516 FYVPQRPYTAVG-TLRDQLIYPLTSDQE-------VEPLTHGGMVELLKNVDLEY-LLDRYPPEKEINWGDELSLGEQQR 586 (1374)
Q Consensus 516 ~~v~Q~p~l~~~-Tv~eni~~~~~~~~~-------~~~~~~~~~~~~l~~~~L~~-~~~~~~~~~~~~~g~~LSgGqkQR 586 (1374)
+|+||+|.++.+ |++||+.+....... ......+++.++++.+++.+ ..++.+ ...||||||||
T Consensus 80 ~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-------~~~LS~G~~qr 152 (243)
T TIGR01978 80 FLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSV-------NEGFSGGEKKR 152 (243)
T ss_pred EeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhccccc-------ccCcCHHHHHH
Confidence 999999988765 899999764221000 00011345778899999963 445433 12599999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhh--ccEEEEecC
Q 000647 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAF--HDVVLSLDG 649 (1374)
Q Consensus 587 lalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~--~d~il~l~~ 649 (1374)
++|||||+++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+.. +|++++|++
T Consensus 153 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~ 220 (243)
T TIGR01978 153 NEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLD 220 (243)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeC
Confidence 9999999999999999999999999999999988764 47899999999999874 799999975
No 309
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.1e-34 Score=314.52 Aligned_cols=191 Identities=28% Similarity=0.361 Sum_probs=164.1
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---cccccEEEEec
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS---DLNKEIFYVPQ 520 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~---~~~~~i~~v~Q 520 (1374)
.++++|+++.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|++|
T Consensus 2 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (207)
T PRK13539 2 MLEGEDLACVRGG-RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDPDVAEACHYLGH 80 (207)
T ss_pred EEEEEeEEEEECC-eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcchhhHhhcEEecC
Confidence 4789999999864 6799999999999999999999999999999999999999999999998641 14567999999
Q ss_pred CCCCC-cCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTA-VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~-~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
++.++ ..|++||+.+..... ...+.++.++++.+++.++.++.+ .+||||||||++||||++++|++
T Consensus 81 ~~~~~~~~tv~~~l~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~la~al~~~p~l 148 (207)
T PRK13539 81 RNAMKPALTVAENLEFWAAFL----GGEELDIAAALEAVGLAPLAHLPF--------GYLSAGQKRRVALARLLVSNRPI 148 (207)
T ss_pred CCcCCCCCcHHHHHHHHHHhc----CCcHHHHHHHHHHcCCHHHHcCCh--------hhcCHHHHHHHHHHHHHhcCCCE
Confidence 88765 579999997643211 123456888999999988766544 58999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhhccEEEEec
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVLSLD 648 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~~d~il~l~ 648 (1374)
+||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+.. |+++.++
T Consensus 149 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~ 199 (207)
T PRK13539 149 WILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLG 199 (207)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeec
Confidence 999999999999999999888764 48999999999999887 9988875
No 310
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=325.74 Aligned_cols=197 Identities=26% Similarity=0.305 Sum_probs=162.8
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc--------c
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~--------~ 510 (1374)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 4 AIETVNLRVYYG-SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred eEEEEeEEEEeC-CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 589999999986 46799999999999999999999999999999999999987 499999998541 2
Q ss_pred ccccEEEEecCCCCCcC-CHHHHhcCCCCCCcc--cCCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhH
Q 000647 511 LNKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGE 583 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~~-Tv~eni~~~~~~~~~--~~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGq 583 (1374)
++++++|+||+|.++.. |+.||+.++...... .....++++.++++.+++... .++. ..+|||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~G~ 154 (253)
T PRK14267 83 VRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDY--------PSNLSGGQ 154 (253)
T ss_pred HhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccC--------hhhCCHHH
Confidence 35679999999988865 999999875321110 001123456788888887532 2332 26899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||++||||++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 223 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYL 223 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEEC
Confidence 9999999999999999999999999999999999988765 3689999999999865 6999999975
No 311
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-34 Score=324.03 Aligned_cols=197 Identities=22% Similarity=0.274 Sum_probs=163.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCC---CcC--CccEEEeCCCCc--------c
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGL---WPL--VSGHIAKPGVGS--------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl---~~~--~~G~I~~~g~~~--------~ 510 (1374)
.++++|+++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+ .+| ++|+|.++|.+. .
T Consensus 3 ~l~~~~~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14245 3 KIDARDVNFWYGD-FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDE 81 (250)
T ss_pred EEEEEEEEEEECC-EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHH
Confidence 6899999999864 6799999999999999999999999999999999997 455 589999998641 2
Q ss_pred ccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhHHH
Q 000647 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 585 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGqkQ 585 (1374)
.++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+. .++. ..+|||||||
T Consensus 82 ~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~G~~q 153 (250)
T PRK14245 82 LRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKES--------AFALSGGQQQ 153 (250)
T ss_pred HhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCC--------cccCCHHHHH
Confidence 346799999999988889999998753211100 01123456788898988643 3332 2689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 586 RlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|++||||++.+|+++||||||++||+.+.+.+.+.+++ .++|+|+|||+++.+ ..+|+++++++
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~ 220 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYM 220 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999999988865 478999999999987 57999999975
No 312
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=323.83 Aligned_cols=198 Identities=21% Similarity=0.204 Sum_probs=164.2
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~-------- 509 (1374)
..++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+.
T Consensus 3 ~~l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 3 IKMESKNLNLWYG-EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred cEEEEEEeEEEEC-CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 3689999999986 46799999999999999999999999999999999999875 799999998541
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCChh----HHhcCCCCccccCCCCCChhHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~L~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1374)
..++.++|+||++.++..|++||+.++...... ......+++.++++.+++.+ ..++.+ ..||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~G~~ 153 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSA--------LKLSGGQQ 153 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCc--------ccCCHHHH
Confidence 235679999999998889999999875321111 00112345667889988753 233333 68999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||++||||++++|+++||||||++||+.+...+.+.+++ .+.|+|+|||+++.+. .+|+++++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~ 221 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLM 221 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEEC
Confidence 999999999999999999999999999999999988865 3689999999999875 6999999976
No 313
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.1e-34 Score=324.80 Aligned_cols=197 Identities=19% Similarity=0.250 Sum_probs=166.8
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCC---ccEEEeCCCCc-----------
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV---SGHIAKPGVGS----------- 509 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~---~G~I~~~g~~~----------- 509 (1374)
.|+++||++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+.
T Consensus 4 ~l~~~nl~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (262)
T PRK09984 4 IIRVEKLAKTFN-QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIR 82 (262)
T ss_pred EEEEeeEEEEeC-CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHH
Confidence 689999999985 568999999999999999999999999999999999999986 49999998541
Q ss_pred cccccEEEEecCCCCCc-CCHHHHhcCCCCCCc--------ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCC
Q 000647 510 DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQ--------EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELS 580 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~--------~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LS 580 (1374)
.+++.++|+||++.++. .|++||+.++..... ........++.++++.+++.+..++.+ .+||
T Consensus 83 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS 154 (262)
T PRK09984 83 KSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV--------STLS 154 (262)
T ss_pred HHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc--------cccC
Confidence 12457999999998876 599999987632110 001112346788999999988877765 5899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 581 LGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 581 gGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
||||||++||||++.+|+++||||||++||..+.+.+.+.+++ .|+|+|++||+++.+ ..+|+++++++
T Consensus 155 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~ 228 (262)
T PRK09984 155 GGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQ 228 (262)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999888764 379999999999975 67999999975
No 314
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=323.63 Aligned_cols=197 Identities=23% Similarity=0.271 Sum_probs=162.8
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc--C---CccEEEeCCCCc--------c
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP--L---VSGHIAKPGVGS--------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~--~---~~G~I~~~g~~~--------~ 510 (1374)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+ | ++|+|.++|.+. .
T Consensus 5 ~l~~~~l~~~~~-~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 83 (252)
T PRK14239 5 ILQVSDLSVYYN-KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVD 83 (252)
T ss_pred eEEEEeeEEEEC-CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHh
Confidence 689999999986 4679999999999999999999999999999999999953 6 599999998531 2
Q ss_pred ccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChh----HHhcCCCCccccCCCCCChhHHH
Q 000647 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQQ 585 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~----~~~~~~~~~~~~~g~~LSgGqkQ 585 (1374)
+++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+ ..++.+ .+|||||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~G~~q 155 (252)
T PRK14239 84 LRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSA--------LGLSGGQQQ 155 (252)
T ss_pred hhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCc--------ccCCHHHHH
Confidence 356799999999998899999998753211110 1112345667888888753 233333 689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 586 RlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|++||||++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+ ..+|+++++++
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 222 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLD 222 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999988865 368999999999876 57999999986
No 315
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-34 Score=323.39 Aligned_cols=207 Identities=22% Similarity=0.310 Sum_probs=174.2
Q ss_pred EEEeeeEEeCCCc-ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEE
Q 000647 1100 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1374)
Q Consensus 1100 I~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~ 1176 (1374)
|+++|+++.|++. +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...++++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999998764 4799999999999999999999999999999999999999999999999887654 234667999
Q ss_pred ecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-cccC
Q 000647 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~-~g~~ 1255 (1374)
+||+|.+|.+|++||+.++... ....++.+.++.+++.+.++.+|.|+++..+ +...
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 138 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPG----------------------ATREEVEEAARAANAHEFIMELPEGYDTVIGERGVK 138 (234)
T ss_pred eCCCCeeccccHHHHhhccCCC----------------------CCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCc
Confidence 9999999999999999865321 0112233445556677777777778877653 5678
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||+|||||++| ||||+++|+++||||||++||.++.+.+.+.++
T Consensus 139 LS~G~~qrv~l------------------------------------a~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~ 182 (234)
T cd03251 139 LSGGQRQRIAI------------------------------------ARALLKDPPILILDEATSALDTESERLVQAALE 182 (234)
T ss_pred CCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999998887765
Q ss_pred h--cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1336 D--MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1336 ~--~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
+ .+.|+|.++|++..+...|+++.|.+|+
T Consensus 183 ~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~ 213 (234)
T cd03251 183 RLMKNRTTFVIAHRLSTIENADRIVVLEDGK 213 (234)
T ss_pred HhcCCCEEEEEecCHHHHhhCCEEEEecCCe
Confidence 4 4899999999998888899999996554
No 316
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.1e-33 Score=319.89 Aligned_cols=191 Identities=25% Similarity=0.392 Sum_probs=164.2
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecC
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQR 521 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~ 521 (1374)
.+.|+++|+++. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|+||+
T Consensus 37 ~~~l~i~nls~~---~~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------~i~yv~q~ 106 (282)
T cd03291 37 DNNLFFSNLCLV---GAPVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------RISFSSQF 106 (282)
T ss_pred CCeEEEEEEEEe---cccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------EEEEEeCc
Confidence 457999999985 35799999999999999999999999999999999999999999999986 59999999
Q ss_pred CCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccc---cCCCCCChhHHHHHHHHHHHccCCC
Q 000647 522 PYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEI---NWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 522 p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~---~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
++++..|++||+.++... ...++.++++.+++.+.++.+|....+ ..+..||||||||++||||++.+|+
T Consensus 107 ~~l~~~tv~enl~~~~~~-------~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 107 SWIMPGTIKENIIFGVSY-------DEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred ccccccCHHHHhhccccc-------CHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999875321 123456677888888888776643221 2246899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHH-H--hcCCEEEEEccChhhHhhccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKV-R--AMGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l-~--~~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
++||||||++||+.+...+++.+ + ..+.|+|++||+++.+..+|++++|++
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~ 233 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHE 233 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEEC
Confidence 99999999999999999887643 2 247899999999999999999999976
No 317
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-34 Score=322.25 Aligned_cols=198 Identities=23% Similarity=0.249 Sum_probs=163.7
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCC-----ccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~-----~G~I~~~g~~~-------- 509 (1374)
+.++++|+++.|+ ++++++|+||+|++|++++|+||||||||||+++|+|+++|. +|+|.++|.+.
T Consensus 3 ~~l~~~~l~~~~~-~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 3 PKIKIRGVNFFYH-KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred ceEEEEEEEEEEC-CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 3589999999986 467999999999999999999999999999999999999997 69999988541
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGqk 584 (1374)
.+++.++|+||+|.++..|++||+.++....... ....++.+.++++.+++.+. .++. ..+||||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LS~Gq~ 153 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKS--------GLALSGGQQ 153 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCC--------cccCCHHHH
Confidence 2356799999999988889999998764211110 11123446667788887543 3332 368999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||++|||||+.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .+|++++|++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~ 221 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLT 221 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeC
Confidence 999999999999999999999999999999999888765 4789999999999876 5799999975
No 318
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.5e-35 Score=308.62 Aligned_cols=198 Identities=24% Similarity=0.282 Sum_probs=168.0
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEe
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYV 1177 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~V 1177 (1374)
|+|+||++.|. .+.+++|+||+|++||.+.++|||||||||+++++-||.+|++|+|.+||.||+++ ..+|++|+||
T Consensus 2 I~~~nvsk~y~-~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYv 80 (309)
T COG1125 2 IEFENVSKRYG-NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYV 80 (309)
T ss_pred ceeeeeehhcC-CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhh
Confidence 79999999885 67899999999999999999999999999999999999999999999999999998 4788999999
Q ss_pred cCCCCCCCc-chHHHhcc-CCC--hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCch--hhhhhccCCccccc
Q 000647 1178 PQRPYTCLG-TLRDQIIY-PLS--REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY--LLEREEVGWDANLN 1251 (1374)
Q Consensus 1178 pQ~P~Lf~G-TlR~Nl~y-p~~--~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~--~v~~~~~Gldt~~~ 1251 (1374)
=|.--||+- |+.+||.. |.- -+.+.+ ++...+.|+.++|.. +..|-
T Consensus 81 iQqigLFPh~Tv~eNIa~VP~L~~w~k~~i-------------------~~r~~ELl~lvgL~p~~~~~Ry--------- 132 (309)
T COG1125 81 IQQIGLFPHLTVAENIATVPKLLGWDKERI-------------------KKRADELLDLVGLDPSEYADRY--------- 132 (309)
T ss_pred hhhcccCCCccHHHHHHhhhhhcCCCHHHH-------------------HHHHHHHHHHhCCCHHHHhhcC---------
Confidence 999998864 99999974 210 011111 234567788888753 34443
Q ss_pred cccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHH
Q 000647 1252 WEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLY 1331 (1374)
Q Consensus 1252 ~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~ 1331 (1374)
..+||||||||+++ ||||..+|+|+|+|||-+|||+-+.+.+|
T Consensus 133 -P~eLSGGQQQRVGv------------------------------------~RALAadP~ilLMDEPFgALDpI~R~~lQ 175 (309)
T COG1125 133 -PHELSGGQQQRVGV------------------------------------ARALAADPPILLMDEPFGALDPITRKQLQ 175 (309)
T ss_pred -chhcCcchhhHHHH------------------------------------HHHHhcCCCeEeecCCccccChhhHHHHH
Confidence 46799999999999 99999999999999999999999998887
Q ss_pred HHHH----hcCceEEEecCCC-CchhhccceEEEEcC
Q 000647 1332 RLAK----DMGITFVTSSQRP-ALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1332 ~~~~----~~~~TvI~IaHRl-~~i~~~~~~l~l~~g 1363 (1374)
+.++ +.|.|+|.|+|+. +.++..|++..+.+|
T Consensus 176 ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G 212 (309)
T COG1125 176 EEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAG 212 (309)
T ss_pred HHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCC
Confidence 6443 4699999999998 789999999999443
No 319
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=5.2e-34 Score=317.90 Aligned_cols=196 Identities=24% Similarity=0.294 Sum_probs=160.1
Q ss_pred EEEeeeEEEcCC------CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCC----C-c----
Q 000647 445 IEFSGVKVVTPT------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGV----G-S---- 509 (1374)
Q Consensus 445 i~~~~v~~~~~~------~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~----~-~---- 509 (1374)
++++|+++.|++ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. + .
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999853 247999999999999999999999999999999999999999999999732 2 0
Q ss_pred ----cc-cccEEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHH-hcCCCCccccCCCCCChh
Q 000647 510 ----DL-NKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLL-DRYPPEKEINWGDELSLG 582 (1374)
Q Consensus 510 ----~~-~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~~~~~~g~~LSgG 582 (1374)
+. ++.++|+||+|.++. .|++||+.++............+++.++++.+++.+.. ++.+ .+||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G 153 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPP--------ATFSGG 153 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCc--------ccCCHH
Confidence 01 346999999998765 59999997643211111111234667889999997643 4433 689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEec
Q 000647 583 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLD 648 (1374)
Q Consensus 583 qkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~ 648 (1374)
||||++|||||+.+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|+++.+.
T Consensus 154 ~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 154 EQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEecC
Confidence 99999999999999999999999999999999999888764 4899999999999885 799998763
No 320
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-34 Score=326.59 Aligned_cols=198 Identities=23% Similarity=0.306 Sum_probs=164.1
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc-------
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~------- 509 (1374)
.+.|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 37 ~~~l~i~~l~~~~~-~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 37 ETVIEARDLNVFYG-DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred CceEEEEEEEEEEC-CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 45699999999986 4679999999999999999999999999999999999997 6899999998531
Q ss_pred -cccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChh----HHhcCCCCccccCCCCCChhHH
Q 000647 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 510 -~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1374)
.+++.++|+||++.++..|++||+.++...... ....++++.++++.+++.. ..++.+ .+||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~i~~~~~~~~--------~~LSgGe~ 186 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGY-DGDIDERVEESLRRAALWDEVKDQLDSSG--------LDLSGGQQ 186 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCC-cHHHHHHHHHHHHHcCCCchhHHHHhCCc--------ccCCHHHH
Confidence 235689999999998888999999875321111 1112456788899998853 334433 68999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhc--CCEEEEEccChhhHh-hccEEE-EecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVL-SLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~--~~TiI~vtH~~~~~~-~~d~il-~l~~ 649 (1374)
||++|||||+++|+++||||||++||+.+.+.+.+.+++. +.|+|++||+++.+. .+|+++ ++++
T Consensus 187 qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~ 255 (285)
T PRK14254 187 QRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTG 255 (285)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeC
Confidence 9999999999999999999999999999999999888753 579999999999875 699975 4554
No 321
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-34 Score=323.27 Aligned_cols=202 Identities=22% Similarity=0.234 Sum_probs=163.8
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc--C---CccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP--L---VSGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~--~---~~G~I~~~g~~~-------- 509 (1374)
+.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.+.
T Consensus 3 ~~l~~~nl~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 81 (252)
T PRK14256 3 NKVKLEQLNVHFG-KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPV 81 (252)
T ss_pred cEEEEEEEEEEeC-CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChH
Confidence 4689999999996 4679999999999999999999999999999999999986 3 689999998541
Q ss_pred cccccEEEEecCCCCCc-CCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHH
Q 000647 510 DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRL 587 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1374)
.+++.++|+||++.++. .|++||+.++....... ....++++.++++.+++.+...... + ....+||||||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~---~~~~~LS~G~~qrl 157 (252)
T PRK14256 82 SIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRL-K---SNAMELSGGQQQRL 157 (252)
T ss_pred HhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHh-h---CCcCcCCHHHHHHH
Confidence 23567999999999887 69999998753211100 1112345678888999864321110 0 01368999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 588 alARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+||||++.+|+++||||||++||+.+.+.+++.+++ .++|+|++||+++.+ ..||+++++++
T Consensus 158 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 222 (252)
T PRK14256 158 CIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYM 222 (252)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEEC
Confidence 999999999999999999999999999999888765 368999999999987 57999999975
No 322
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-34 Score=325.06 Aligned_cols=198 Identities=22% Similarity=0.236 Sum_probs=163.6
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc--C---CccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP--L---VSGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~--~---~~G~I~~~g~~~-------- 509 (1374)
..++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+ | ++|+|.++|.+.
T Consensus 11 ~~l~i~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 11 EVYQINGMNLWYG-QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred ceEEEeeEEEEEC-CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 4799999999986 4679999999999999999999999999999999999987 3 599999998641
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGqk 584 (1374)
.+++.++|+||+|.++..|++||+.++....... .....+++.++++.+++.+. .++. ..+||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--------~~~LS~Gq~ 161 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--------ALSLSGGQQ 161 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCC--------cccCCHHHH
Confidence 2356799999999988889999998753211100 01112346677888888543 2332 368999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||++|||+++++|+++||||||++||+.+...+.+.+++ .++|+|+|||+++.+. .+|++++|++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 229 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYM 229 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999988765 3789999999999874 7999999975
No 323
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-34 Score=324.22 Aligned_cols=203 Identities=20% Similarity=0.243 Sum_probs=162.8
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCcccE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r~~i 1174 (1374)
|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..|.++
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i 79 (235)
T cd03261 1 IELRGLTKSFGG-RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRM 79 (235)
T ss_pred CeEEEEEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcce
Confidence 478999999864 56999999999999999999999999999999999999999999999999886542 346689
Q ss_pred EEecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1175 FYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1175 ~~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
+||||+|.+|.+ |++||+.++..... +. ..+...+.+.++++.+++.+...+. .
T Consensus 80 ~~v~q~~~~~~~~tv~~~l~~~~~~~~---------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 134 (235)
T cd03261 80 GMLFQSGALFDSLTVFENVAFPLREHT---------RL------SEEEIREIVLEKLEAVGLRGAEDLY----------P 134 (235)
T ss_pred EEEccCcccCCCCcHHHHHHHHHhhcc---------CC------CHHHHHHHHHHHHHHcCCchhhcCC----------h
Confidence 999999999986 99999976421000 00 0000123355677777775443332 3
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||||||||++| ||||+++|+++||||||++||.++.+.+.+.
T Consensus 135 ~~LSgG~~qrv~i------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~ 178 (235)
T cd03261 135 AELSGGMKKRVAL------------------------------------ARALALDPELLLYDEPTAGLDPIASGVIDDL 178 (235)
T ss_pred hhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEecCCcccCCHHHHHHHHHH
Confidence 5699999999999 9999999999999999999999999887776
Q ss_pred HHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1334 AKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1334 ~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+++ .|+|+|+|+|+++.+ .+.|+++.|.+|+
T Consensus 179 l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~ 214 (235)
T cd03261 179 IRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGK 214 (235)
T ss_pred HHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCe
Confidence 543 489999999999765 5689999996543
No 324
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=324.24 Aligned_cols=196 Identities=23% Similarity=0.286 Sum_probs=162.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc--------c
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~--------~ 510 (1374)
.++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 4 ~l~i~~v~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~ 82 (258)
T PRK14241 4 RIDVKDLNIYYG-SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVA 82 (258)
T ss_pred cEEEeeEEEEEC-CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHH
Confidence 589999999986 46799999999999999999999999999999999999974 799999998541 2
Q ss_pred ccccEEEEecCCCCCc-CCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCChh----HHhcCCCCccccCCCCCChhHH
Q 000647 511 LNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~L~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1374)
+++.++|++|++.++. .|++||+.++...... .....++++.++++.+++.+ ..++.+ .+||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------~~LS~G~~ 154 (258)
T PRK14241 83 VRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPG--------GGLSGGQQ 154 (258)
T ss_pred HhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCc--------ccCCHHHH
Confidence 3467999999998876 5999999875321110 01112345677888898853 333333 68999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEec
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLD 648 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~ 648 (1374)
||++||||++++|+++||||||++||+.+...+.+.+++ .++|+|+|||+++.+ +.+|++++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~ 221 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFN 221 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 999999999999999999999999999999999888764 368999999999987 5799999997
No 325
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=340.15 Aligned_cols=204 Identities=18% Similarity=0.262 Sum_probs=169.2
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEec
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~Vp 1178 (1374)
.|+++||++.|+++..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.++|.++.+....+++|+|||
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 38999999999656789999999999999999999999999999999999999999999999999887643446799999
Q ss_pred CCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|+|.+|+ .|++|||.|+..... . ......+.+.++++.++|.++.++.| .+||
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~~----------~------~~~~~~~~~~~~l~~~gL~~~~~~~~----------~~LS 136 (356)
T PRK11650 83 QNYALYPHMSVRENMAYGLKIRG----------M------PKAEIEERVAEAARILELEPLLDRKP----------RELS 136 (356)
T ss_pred CCccccCCCCHHHHHHhHHhhcC----------C------CHHHHHHHHHHHHHHcCChhHhhCCh----------hhCC
Confidence 9999996 599999998753100 0 00001234667888888877666543 5799
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH--
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK-- 1335 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~-- 1335 (1374)
||||||+|| ||||+++|++||||||||+||..+.+.+.+.++
T Consensus 137 gGq~QRval------------------------------------ARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l 180 (356)
T PRK11650 137 GGQRQRVAM------------------------------------GRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRL 180 (356)
T ss_pred HHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH
Confidence 999999999 999999999999999999999999987766443
Q ss_pred --hcCceEEEecCCCC-chhhccceEEEEcCC
Q 000647 1336 --DMGITFVTSSQRPA-LIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1336 --~~~~TvI~IaHRl~-~i~~~~~~l~l~~g~ 1364 (1374)
+.|+|+|.|+|++. ...+.|+++.+.+|+
T Consensus 181 ~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~ 212 (356)
T PRK11650 181 HRRLKTTSLYVTHDQVEAMTLADRVVVMNGGV 212 (356)
T ss_pred HHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 34899999999985 567889998886543
No 326
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=322.62 Aligned_cols=197 Identities=21% Similarity=0.245 Sum_probs=162.8
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc--------c
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~--------~ 510 (1374)
.++++||++.|++ +++++|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+. .
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14240 3 KISVKDLDLFYGD-FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQ 81 (250)
T ss_pred eEEEEEEEEEECC-ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHH
Confidence 5899999999864 6799999999999999999999999999999999999763 699999998541 2
Q ss_pred ccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhHHH
Q 000647 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 585 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGqkQ 585 (1374)
+++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+. .++. ..+|||||||
T Consensus 82 ~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LS~G~~q 153 (250)
T PRK14240 82 LRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKS--------ALGLSGGQQQ 153 (250)
T ss_pred HhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcC--------CCCCCHHHHH
Confidence 356799999999988899999998753211100 01123456778888887532 3332 2689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 586 RlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|++||||++++|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..+|+++++++
T Consensus 154 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~ 220 (250)
T PRK14240 154 RLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLN 220 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999999888765 378999999999976 46999999985
No 327
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=322.28 Aligned_cols=203 Identities=22% Similarity=0.286 Sum_probs=164.3
Q ss_pred CEEEeeeEEeCCCc---ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccC-----C
Q 000647 1099 SISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG-----S 1170 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~---~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~-----~ 1170 (1374)
.|+++||++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++..... .
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 48999999999753 579999999999999999999999999999999999999999999999998876521 2
Q ss_pred -cccEEEecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcc
Q 000647 1171 -GCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1374)
Q Consensus 1171 -r~~i~~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt 1248 (1374)
+++++||||+|.+|++ |+++|+.++... .+. ..+..++.+.++++.++|.+...+.
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~gl~~~~~~~------ 142 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLI----------GKK------KPAEINSRALEMLAAVGLEHRANHR------ 142 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHh----------cCC------CHHHHHHHHHHHHHHcCCchhhhCC------
Confidence 3579999999999876 999999764210 000 0000123456778887775543332
Q ss_pred ccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHH
Q 000647 1249 NLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEE 1328 (1374)
Q Consensus 1249 ~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~ 1328 (1374)
...||||||||++| |||++++|+++||||||++||.++.+
T Consensus 143 ----~~~LSgG~~qrl~l------------------------------------a~al~~~p~lllLDEPt~~LD~~~~~ 182 (233)
T PRK11629 143 ----PSELSGGERQRVAI------------------------------------ARALVNNPRLVLADEPTGNLDARNAD 182 (233)
T ss_pred ----hhhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCCCCCHHHHH
Confidence 35699999999999 99999999999999999999999998
Q ss_pred HHHHHHHh----cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1329 QLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1329 ~l~~~~~~----~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
.+.+.+++ .|+|+|.|+|+++.+...++++.|.+|
T Consensus 183 ~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G 221 (233)
T PRK11629 183 SIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDG 221 (233)
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECC
Confidence 87765543 489999999999888877888888554
No 328
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-34 Score=320.43 Aligned_cols=195 Identities=27% Similarity=0.394 Sum_probs=165.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----cccccEEEEec
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----DLNKEIFYVPQ 520 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----~~~~~i~~v~Q 520 (1374)
|+++|+++.|++ ++++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+. ..++.++|+||
T Consensus 1 l~~~~l~~~~~~--~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q 78 (235)
T cd03299 1 LKVENLSKDWKE--FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQ 78 (235)
T ss_pred CeeEeEEEEeCC--ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEee
Confidence 468899998863 389999999999999999999999999999999999999999999998641 12468999999
Q ss_pred CCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 521 RPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 521 ~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
++.++. .|+.||+.++...........++++.++++.++|.++.++.+ .+||||||||++||||++++|++
T Consensus 79 ~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrl~laral~~~p~l 150 (235)
T cd03299 79 NYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP--------ETLSGGEQQRVAIARALVVNPKI 150 (235)
T ss_pred cCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc--------ccCCHHHHHHHHHHHHHHcCCCE
Confidence 998875 699999987532211001112345678899999998888876 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++|||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 151 lllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~ 205 (235)
T cd03299 151 LLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLN 205 (235)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999887764 3899999999999875 6999999975
No 329
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-34 Score=334.26 Aligned_cols=198 Identities=22% Similarity=0.282 Sum_probs=161.3
Q ss_pred cEEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc----CCccEEEeCCCCc------c
Q 000647 444 YIEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP----LVSGHIAKPGVGS------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~----~~~G~I~~~g~~~------~ 510 (1374)
.++++|+++.|++. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+- +
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 48999999998653 469999999999999999999999999999999999998 4899999999641 1
Q ss_pred ----ccccEEEEecCCC--CC-cCCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCChh---HHhcCCCCccccCCCCC
Q 000647 511 ----LNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDEL 579 (1374)
Q Consensus 511 ----~~~~i~~v~Q~p~--l~-~~Tv~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~L~~---~~~~~~~~~~~~~g~~L 579 (1374)
.++.|+||||+|. +. ..|+.+++..+.... ........+++.++++.++|.+ ..++.| .+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p--------~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYP--------HQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCc--------hhC
Confidence 1246999999995 33 357777765432111 0011123456788999999964 455655 689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 580 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 580 SgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|||||||++|||||+.+|+++|+||||++||+.+...+++.+++ .|.|+|+||||++.+ ..+|+|++|.+
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~ 229 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYA 229 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999887754 489999999999988 57999999975
No 330
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.3e-34 Score=324.75 Aligned_cols=211 Identities=23% Similarity=0.273 Sum_probs=165.4
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCcccE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r~~i 1174 (1374)
|+++||++.|+.++++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..|.++
T Consensus 2 l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 81 (243)
T TIGR02315 2 LEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRI 81 (243)
T ss_pred eEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhhe
Confidence 689999999974467999999999999999999999999999999999999999999999999886542 246679
Q ss_pred EEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1175 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1175 ~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
+||||+|.+|. .|+++|+.++.......... ..+. .....++++.++++.+++.....+ ..
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~ 143 (243)
T TIGR02315 82 GMIFQHYNLIERLTVLENVLHGRLGYKPTWRS--LLGR------FSEEDKERALSALERVGLADKAYQ----------RA 143 (243)
T ss_pred EEEcCCCcccccccHHHHHhhcccccccchhh--hhcc------ccHHHHHHHHHHHHHcCcHhhhcC----------Cc
Confidence 99999999886 59999997653210000000 0000 001113446677887777544332 23
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||||||||++| ||||+++|++|||||||++||.++.+.+.+.
T Consensus 144 ~~LSgG~~qrv~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~ 187 (243)
T TIGR02315 144 DQLSGGQQQRVAI------------------------------------ARALAQQPDLILADEPIASLDPKTSKQVMDY 187 (243)
T ss_pred ccCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 5799999999999 9999999999999999999999999877765
Q ss_pred HHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1334 AKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1334 ~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+++ .|+|+|+|+|+++.+ ++.|+++.|.+|+
T Consensus 188 l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~ 223 (243)
T TIGR02315 188 LKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGE 223 (243)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCE
Confidence 542 389999999999876 6789999996553
No 331
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-34 Score=313.53 Aligned_cols=182 Identities=28% Similarity=0.361 Sum_probs=161.7
Q ss_pred eeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------c---c-ccccEEEEecCCCCCc-CC
Q 000647 460 LVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------S---D-LNKEIFYVPQRPYTAV-GT 528 (1374)
Q Consensus 460 ~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~---~-~~~~i~~v~Q~p~l~~-~T 528 (1374)
-++|+||+|+.||+..|.|-||||||||+|++.||++|++|+|.++|.+ . + .+++++.|+|+.-|++ .|
T Consensus 43 Gv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrt 122 (386)
T COG4175 43 GVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRT 122 (386)
T ss_pred eeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchh
Confidence 5789999999999999999999999999999999999999999999975 1 1 2478999999987655 69
Q ss_pred HHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCC
Q 000647 529 LRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSA 608 (1374)
Q Consensus 529 v~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsa 608 (1374)
|.||..||.......+....++..+.|+.+||+.+.+++| ++||||+|||+.|||||..+|+|++||||+||
T Consensus 123 Vl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp--------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSA 194 (386)
T COG4175 123 VLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP--------NELSGGMQQRVGLARALANDPDILLMDEAFSA 194 (386)
T ss_pred HhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc--------ccccchHHHHHHHHHHHccCCCEEEecCchhh
Confidence 9999999987655544455677889999999999999999 68999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHH----hcCCEEEEEccChhhH-hhccEEEEecC
Q 000647 609 VTTDMEERFCAKVR----AMGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 609 LD~~~~~~i~~~l~----~~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|||--..++++.+. +.++|||+||||++.. +..|||..|++
T Consensus 195 LDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkd 240 (386)
T COG4175 195 LDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKD 240 (386)
T ss_pred cChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecC
Confidence 99998888877653 3589999999999875 67899999986
No 332
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-34 Score=304.83 Aligned_cols=212 Identities=22% Similarity=0.265 Sum_probs=168.1
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-----cCCccc
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-----AGSGCG 1173 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-----~~~r~~ 1173 (1374)
.|+++||+..||+++.+|+|+||+|++||.|+|+||||||||||++.|.|+++|++|+|.++|.++... ..+|.+
T Consensus 3 ~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~~ 82 (258)
T COG3638 3 MIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRRD 82 (258)
T ss_pred eEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHHh
Confidence 489999999999999999999999999999999999999999999999999999999999999999887 345778
Q ss_pred EEEecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccc
Q 000647 1174 IFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1374)
Q Consensus 1174 i~~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~ 1252 (1374)
|++|.|.|-|-+- |+-+|+..|.-.....+..+ .+. ..+.......++|+.||+.+..- -+
T Consensus 83 iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~sl--fgl------fsk~dk~~Al~aLervgi~~~A~----------qr 144 (258)
T COG3638 83 IGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSL--FGL------FSKEDKAQALDALERVGILDKAY----------QR 144 (258)
T ss_pred ceeEeccCCcccccHHHHHHHhhhcccchHHHHH--hCC------CCHHHHHHHHHHHHHcCcHHHHH----------HH
Confidence 9999999999654 89999875431100001000 000 00011122446788888754421 12
Q ss_pred ccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH
Q 000647 1253 EDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR 1332 (1374)
Q Consensus 1253 g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~ 1332 (1374)
-+.||||||||++| ||||..+|||+|-|||||+||+.+.+.+.+
T Consensus 145 a~~LSGGQQQRVaI------------------------------------ARaL~Q~pkiILADEPvasLDp~~a~~Vm~ 188 (258)
T COG3638 145 ASTLSGGQQQRVAI------------------------------------ARALVQQPKIILADEPVASLDPESAKKVMD 188 (258)
T ss_pred hccCCcchhHHHHH------------------------------------HHHHhcCCCEEecCCcccccChhhHHHHHH
Confidence 46899999999999 999999999999999999999999877666
Q ss_pred HHH----hcCceEEEecCCCCc-hhhccceEEEEcCC
Q 000647 1333 LAK----DMGITFVTSSQRPAL-IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1333 ~~~----~~~~TvI~IaHRl~~-i~~~~~~l~l~~g~ 1364 (1374)
.++ +.|.|+|+.-|...+ .+|.++++-|.+|+
T Consensus 189 ~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ 225 (258)
T COG3638 189 ILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGR 225 (258)
T ss_pred HHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCc
Confidence 544 469999999999965 47889998886664
No 333
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-34 Score=332.25 Aligned_cols=200 Identities=24% Similarity=0.335 Sum_probs=173.8
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEe
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 1177 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~V 1177 (1374)
..|+|+||+..|- ...+++|+||+|++||.+.+.|||||||||++++|.||..|++|+|.++|.||.++--.++.|++|
T Consensus 4 ~~l~i~~v~k~yg-~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~V 82 (352)
T COG3842 4 PALEIRNVSKSFG-DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMV 82 (352)
T ss_pred ceEEEEeeeeecC-CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhccccee
Confidence 4699999999996 788999999999999999999999999999999999999999999999999999996566689999
Q ss_pred cCCCCCCC-cchHHHhccCCCh----hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccc
Q 000647 1178 PQRPYTCL-GTLRDQIIYPLSR----EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1374)
Q Consensus 1178 pQ~P~Lf~-GTlR~Nl~yp~~~----~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~ 1252 (1374)
+|+.-||+ -|++|||.||+.. .+++ -++.+.++|+.|+|.++-.+.
T Consensus 83 FQ~YALFPHltV~~NVafGLk~~~~~~~~~-------------------i~~rv~e~L~lV~L~~~~~R~---------- 133 (352)
T COG3842 83 FQSYALFPHMTVEENVAFGLKVRKKLKKAE-------------------IKARVEEALELVGLEGFADRK---------- 133 (352)
T ss_pred ecCcccCCCCcHHHHhhhhhhhcCCCCHHH-------------------HHHHHHHHHHHcCchhhhhhC----------
Confidence 99999986 5999999999861 1111 123577889999998766654
Q ss_pred ccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH
Q 000647 1253 EDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR 1332 (1374)
Q Consensus 1253 g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~ 1332 (1374)
..+||||||||+|+ ||||..+|++||||||-||||....+.|+.
T Consensus 134 p~qLSGGQqQRVAL------------------------------------ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~ 177 (352)
T COG3842 134 PHQLSGGQQQRVAL------------------------------------ARALVPEPKVLLLDEPLSALDAKLREQMRK 177 (352)
T ss_pred hhhhChHHHHHHHH------------------------------------HHHhhcCcchhhhcCcccchhHHHHHHHHH
Confidence 46799999999999 999999999999999999999998776654
Q ss_pred H----HHhcCceEEEecCCC-CchhhccceEEEEcC
Q 000647 1333 L----AKDMGITFVTSSQRP-ALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1333 ~----~~~~~~TvI~IaHRl-~~i~~~~~~l~l~~g 1363 (1374)
- .++.|+|+|.|||+- +.+...|++..+.+|
T Consensus 178 Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G 213 (352)
T COG3842 178 ELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDG 213 (352)
T ss_pred HHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCC
Confidence 3 345699999999996 778889999998655
No 334
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=323.05 Aligned_cols=196 Identities=21% Similarity=0.228 Sum_probs=162.4
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc--------cc
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS--------DL 511 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~--------~~ 511 (1374)
-+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+. .+
T Consensus 6 ~~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 84 (251)
T PRK14244 6 ASVKNLNLWYG-SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLL 84 (251)
T ss_pred EEeeeEEEEEC-CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHH
Confidence 46899999985 5689999999999999999999999999999999999986 4799999998541 24
Q ss_pred cccEEEEecCCCCCcCCHHHHhcCCCCCCcc--cCCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhHHH
Q 000647 512 NKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 585 (1374)
Q Consensus 512 ~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~--~~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGqkQ 585 (1374)
++.++|+||+|.++.+|++||+.++...... .....++++.++++.+++.+. .++. ...|||||||
T Consensus 85 ~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~Gq~q 156 (251)
T PRK14244 85 RAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDS--------AFELSGGQQQ 156 (251)
T ss_pred hhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcC--------hhhCCHHHHH
Confidence 5689999999998888999999875211110 001123456788999998653 2332 2689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 586 RlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|++||||++++|+++||||||++||+.+.+.+.+.+++ .++|+|+|||+++.+. .+|++++|++
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~ 223 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQS 223 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEEC
Confidence 99999999999999999999999999999999888764 4799999999999875 6999999986
No 335
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-34 Score=324.33 Aligned_cols=196 Identities=24% Similarity=0.324 Sum_probs=164.9
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCC--------ccEEEeCCCCc------c
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV--------SGHIAKPGVGS------D 510 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~--------~G~I~~~g~~~------~ 510 (1374)
|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+. .
T Consensus 2 l~~~nl~~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (272)
T PRK13547 2 LTADHLHVARR-HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPR 80 (272)
T ss_pred eEEEEEEEEEC-CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHH
Confidence 78999999885 568999999999999999999999999999999999999998 99999998541 2
Q ss_pred ccccEEEEecCCC-CCcCCHHHHhcCCCCCCc----ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHH
Q 000647 511 LNKEIFYVPQRPY-TAVGTLRDQLIYPLTSDQ----EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQ 585 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~-l~~~Tv~eni~~~~~~~~----~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQ 585 (1374)
+++.++|+||++. ++..|++||+.++..... .......+.+.++++.+++.+..++.+ .+|||||||
T Consensus 81 ~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~q 152 (272)
T PRK13547 81 LARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV--------TTLSGGELA 152 (272)
T ss_pred HHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc--------ccCCHHHHH
Confidence 3456899999986 467899999987532110 001112345778899999988777654 689999999
Q ss_pred HHHHHHHHc---------cCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 586 RLGMARLFY---------HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 586 RlalARal~---------~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|++|||||+ .+|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+. .+|++++|++
T Consensus 153 rv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~ 230 (272)
T PRK13547 153 RVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLAD 230 (272)
T ss_pred HHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999 59999999999999999999999887764 3799999999999885 7999999975
No 336
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.7e-34 Score=318.78 Aligned_cols=203 Identities=23% Similarity=0.290 Sum_probs=164.3
Q ss_pred EEEeeeEEeCCCc---ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEE
Q 000647 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIF 1175 (1374)
Q Consensus 1100 I~f~~V~~~yp~~---~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~ 1175 (1374)
|+++||++.|++. +++++|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++... ...|++++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 6899999999763 2799999999999999999999999999999999999999999999999988653 24467899
Q ss_pred EecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccccc
Q 000647 1176 YVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1374)
Q Consensus 1176 ~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~ 1254 (1374)
++||+|.+|.+ |++||+.++... .+. .....++.+.++++.+++.+..+.. ..
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~ 135 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGL----------YGL------KGDELTARLEELADRLGMEELLDRR----------VG 135 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHHcCCHHHHhhh----------hh
Confidence 99999999985 999999753210 000 0000123456778888876554432 35
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
.||||||||++| |||++++|+++||||||++||..+.+.+.+.+
T Consensus 136 ~LS~G~~qrv~l------------------------------------aral~~~p~illlDEPt~~LD~~~~~~l~~~l 179 (218)
T cd03266 136 GFSTGMRQKVAI------------------------------------ARALVHDPPVLLLDEPTTGLDVMATRALREFI 179 (218)
T ss_pred hcCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHH
Confidence 699999999999 99999999999999999999999998777765
Q ss_pred Hh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1335 KD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1335 ~~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
++ .|+|+|+|+|++..+ ++.++++.+.+|+
T Consensus 180 ~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 213 (218)
T cd03266 180 RQLRALGKCILFSTHIMQEVERLCDRVVVLHRGR 213 (218)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 43 489999999999754 5788999996553
No 337
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-34 Score=316.38 Aligned_cols=201 Identities=27% Similarity=0.359 Sum_probs=171.8
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccc---ccCCcccEE
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE---EAGSGCGIF 1175 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~---~~~~r~~i~ 1175 (1374)
.|+++|++|+||+++++|+++||+|++||.++|+|+||||||||+++|.|+.+|.+|.|.++|.+++. ...+|++++
T Consensus 3 ~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG 82 (235)
T COG1122 3 MIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVG 82 (235)
T ss_pred eEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceE
Confidence 48999999999888899999999999999999999999999999999999999999999999999874 356788999
Q ss_pred EecCCC--CCCCcchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1176 YVPQRP--YTCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1176 ~VpQ~P--~Lf~GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
+|.|+| .+|..|+.|.++|+... .+++ -++.+.++|+.+++.++.++.
T Consensus 83 ~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e-------------------~~~rv~~~l~~vgl~~~~~r~-------- 135 (235)
T COG1122 83 LVFQNPDDQLFGPTVEDEVAFGLENLGLPREE-------------------IEERVAEALELVGLEELLDRP-------- 135 (235)
T ss_pred EEEECcccccccCcHHHHHhhchhhcCCCHHH-------------------HHHHHHHHHHHcCchhhccCC--------
Confidence 999999 78999999999987531 1111 134577889999998775554
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
...||||||||+|| |.+|..+|+|+|||||||+||....+.+
T Consensus 136 --p~~LSGGqkqRvaI------------------------------------A~vLa~~P~iliLDEPta~LD~~~~~~l 177 (235)
T COG1122 136 --PFNLSGGQKQRVAI------------------------------------AGVLAMGPEILLLDEPTAGLDPKGRREL 177 (235)
T ss_pred --ccccCCcceeeHHh------------------------------------hHHHHcCCCEEEEcCCCCCCCHHHHHHH
Confidence 35699999999999 9999999999999999999999998877
Q ss_pred HHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1331 YRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1331 ~~~~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.+++++ .|.|+|+|+|++..+ .+.++++.+.+|+
T Consensus 178 ~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~ 216 (235)
T COG1122 178 LELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGK 216 (235)
T ss_pred HHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCE
Confidence 665543 378999999999655 5588999986654
No 338
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=5e-34 Score=311.75 Aligned_cols=187 Identities=26% Similarity=0.359 Sum_probs=157.5
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEEe
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 519 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v~ 519 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+|
T Consensus 1 l~~~~l~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (198)
T TIGR01189 1 LAARNLACSRG-ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQRDEPHRNILYLG 79 (198)
T ss_pred CEEEEEEEEEC-CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccchHHhhhheEEec
Confidence 46899999885 4679999999999999999999999999999999999999999999999864 12346799999
Q ss_pred cCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|++.++. .|++||+.+...... ..+.++.++++.+++++..++.+ .+||||||||++||||++++|+
T Consensus 80 q~~~~~~~~tv~~~l~~~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p~ 147 (198)
T TIGR01189 80 HLPGLKPELSALENLHFWAAIHG----GAQRTIEDALAAVGLTGFEDLPA--------AQLSAGQQRRLALARLWLSRAP 147 (198)
T ss_pred cCcccccCCcHHHHHHHHHHHcC----CcHHHHHHHHHHcCCHHHhcCCh--------hhcCHHHHHHHHHHHHHhcCCC
Confidence 9998876 699999976432111 12346788999999998877655 5899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhhccEEE
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAFHDVVL 645 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~~d~il 645 (1374)
++||||||++||+.+.+.+.+.+++ .|.|+|++||+...+. +++++
T Consensus 148 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~-~~~~~ 196 (198)
T TIGR01189 148 LWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGLV-EAREL 196 (198)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccccc-ceEEe
Confidence 9999999999999999999888764 4889999999985433 34444
No 339
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=325.86 Aligned_cols=199 Identities=21% Similarity=0.215 Sum_probs=162.3
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc-------
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~------- 509 (1374)
...++++|+++.|+ ++++++|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 22 ~~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 22 KVVFDTQNLNLWYG-EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred ceEEEEeeeEEEEC-CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 34799999999986 4579999999999999999999999999999999999987 6999999998531
Q ss_pred -cccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCh----hHHhcCCCCccccCCCCCChhH
Q 000647 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGE 583 (1374)
Q Consensus 510 -~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~----~~~~~~~~~~~~~~g~~LSgGq 583 (1374)
.+++.++|+||+|.++..|++||+.++....... ....+..+.++++.+++. +..++. ...|||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--------~~~LSgGe 172 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--------AYGLSGGQ 172 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcC--------cccCCHHH
Confidence 2356799999999998889999998753211100 001123345667666543 333333 36899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||++|||||+++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|++
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~ 241 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLN 241 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999988765 3789999999999875 6999999975
No 340
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2e-34 Score=317.41 Aligned_cols=197 Identities=24% Similarity=0.248 Sum_probs=164.1
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++||++.|++ +++++|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.++|.++......++++++|||
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (208)
T cd03268 1 LKTNDLTKTYGK-KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIE 79 (208)
T ss_pred CEEEEEEEEECC-eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecC
Confidence 578999998864 6799999999999999999999999999999999999999999999999988654334567999999
Q ss_pred CCCCC-CcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf-~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
+|.+| ..|++||+.++.... ...++++.++++.+++.+..++. ...|||
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~~--------------------~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 129 (208)
T cd03268 80 APGFYPNLTARENLRLLARLL--------------------GIRKKRIDEVLDVVGLKDSAKKK----------VKGFSL 129 (208)
T ss_pred CCccCccCcHHHHHHHHHHhc--------------------CCcHHHHHHHHHHcCCHHHHhhh----------HhhCCH
Confidence 99887 579999997542100 01234566778888876554432 356999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| |||++++|+++||||||++||.++.+.+.+++++
T Consensus 130 G~~qrv~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~ 173 (208)
T cd03268 130 GMKQRLGI------------------------------------ALALLGNPDLLILDEPTNGLDPDGIKELRELILSLR 173 (208)
T ss_pred HHHHHHHH------------------------------------HHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999887776543
Q ss_pred -cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1337 -MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1337 -~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
.|.|+|+++|++..+ .+.++++.|.+|
T Consensus 174 ~~~~tii~~tH~~~~~~~~~d~v~~l~~g 202 (208)
T cd03268 174 DQGITVLISSHLLSEIQKVADRIGIINKG 202 (208)
T ss_pred HCCCEEEEEcCCHHHHHHhcCEEEEEECC
Confidence 589999999999866 578999999654
No 341
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=329.33 Aligned_cols=204 Identities=20% Similarity=0.291 Sum_probs=167.9
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEE
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~ 1176 (1374)
-|+++||++.||..+++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++.+. ..++.+++|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 489999999998666799999999999999999999999999999999999999999999999988764 234567999
Q ss_pred ecCCC--CCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccccc
Q 000647 1177 VPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1374)
Q Consensus 1177 VpQ~P--~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~ 1254 (1374)
|||+| .+|..|+++|+.++.... +. .....++.+.++++.++|.....+.| .
T Consensus 84 v~q~~~~~~~~~tv~e~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~L~~~~~~~~----------~ 137 (274)
T PRK13647 84 VFQDPDDQVFSSTVWDDVAFGPVNM----------GL------DKDEVERRVEEALKAVRMWDFRDKPP----------Y 137 (274)
T ss_pred EecChhhhhccCcHHHHHHhhHHHc----------CC------CHHHHHHHHHHHHHHCCCHHHhcCCh----------h
Confidence 99999 678899999998652100 00 00001234567788888865554432 4
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
.||||||||++| ||||+++|+++||||||++||+.+.+.+.+++
T Consensus 138 ~LSgG~~qrv~l------------------------------------araL~~~p~llllDEPt~~LD~~~~~~l~~~l 181 (274)
T PRK13647 138 HLSYGQKKRVAI------------------------------------AGVLAMDPDVIVLDEPMAYLDPRGQETLMEIL 181 (274)
T ss_pred hCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEECCCcCCCHHHHHHHHHHH
Confidence 699999999999 99999999999999999999999998777655
Q ss_pred Hh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1335 KD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1335 ~~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
++ .|+|+|.|+|+++.+ ++.|+++.|.+|+
T Consensus 182 ~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~ 215 (274)
T PRK13647 182 DRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGR 215 (274)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 42 489999999999876 7899999996654
No 342
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.7e-34 Score=323.16 Aligned_cols=207 Identities=25% Similarity=0.352 Sum_probs=173.9
Q ss_pred EEEeeeEEeCCC--cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc--CCcccEE
Q 000647 1100 ISFSKLDIITPS--QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 1175 (1374)
Q Consensus 1100 I~f~~V~~~yp~--~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~--~~r~~i~ 1175 (1374)
|+++|+++.|++ ..++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..+++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 478999999875 357999999999999999999999999999999999999999999999999886542 3356799
Q ss_pred EecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-ccc
Q 000647 1176 YVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WED 1254 (1374)
Q Consensus 1176 ~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~-~g~ 1254 (1374)
|+||+|.+|+.|++||+.++.... ..+++.+.++..++.++++.+|.|+++..+ +..
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 138 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDA----------------------TDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGS 138 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCC----------------------CHHHHHHHHHHcChHHHHHhhccccceeeccCCc
Confidence 999999999999999998753210 112233445556677777777888887653 467
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
+||||||||++| |||++++|+++||||||++||.+..+.+.+.+
T Consensus 139 ~LS~G~~qrv~l------------------------------------a~al~~~p~llllDEP~~gLD~~~~~~l~~~l 182 (238)
T cd03249 139 QLSGGQKQRIAI------------------------------------ARALLRNPKILLLDEATSALDAESEKLVQEAL 182 (238)
T ss_pred cCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCccccCCHHHHHHHHHHH
Confidence 899999999999 99999999999999999999999998887766
Q ss_pred Hh--cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1335 KD--MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1335 ~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
++ .|+|+|+++|+++.+.+.|+++.|.+|.
T Consensus 183 ~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~ 214 (238)
T cd03249 183 DRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQ 214 (238)
T ss_pred HHhcCCCEEEEEeCCHHHHhhCCEEEEEECCE
Confidence 53 5899999999998888899999996553
No 343
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-34 Score=335.57 Aligned_cols=187 Identities=24% Similarity=0.325 Sum_probs=162.7
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-c---------ccccc
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-S---------DLNKE 514 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~---------~~~~~ 514 (1374)
|++ |+++.|.+ + .+ |+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ . ..+++
T Consensus 2 l~~-~l~k~~~~-~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~ 77 (352)
T PRK11144 2 LEL-NFKQQLGD-L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRR 77 (352)
T ss_pred eEE-EEEEEeCC-E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCC
Confidence 567 89998853 3 33 8999999999999999999999999999999999999999998853 1 13568
Q ss_pred EEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 515 IFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 515 i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
++|+||++.++. .|++||+.|+... ...+++.++++.+++.++.++.| .+||||||||++|||||
T Consensus 78 i~~v~q~~~l~~~~tv~enl~~~~~~------~~~~~~~~~l~~~gl~~~~~~~~--------~~LSgGq~qRvalaraL 143 (352)
T PRK11144 78 IGYVFQDARLFPHYKVRGNLRYGMAK------SMVAQFDKIVALLGIEPLLDRYP--------GSLSGGEKQRVAIGRAL 143 (352)
T ss_pred EEEEcCCcccCCCCcHHHHHHhhhhh------hhHHHHHHHHHHcCCchhhhCCc--------ccCCHHHHHHHHHHHHH
Confidence 999999998886 6999999987431 23457889999999998888877 68999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+++|+++||||||++||+.+.+.+.+.+++ .|+|+|+|||+++.+ ..+|++++|++
T Consensus 144 ~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~ 204 (352)
T PRK11144 144 LTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQ 204 (352)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999998887754 389999999999876 57999999985
No 344
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.7e-34 Score=318.40 Aligned_cols=202 Identities=21% Similarity=0.254 Sum_probs=162.5
Q ss_pred EEEeeeEEeCCCc---ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccC-----Cc
Q 000647 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG-----SG 1171 (1374)
Q Consensus 1100 I~f~~V~~~yp~~---~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~-----~r 1171 (1374)
|+++||++.|++. +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.+... .|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 6899999999752 579999999999999999999999999999999999999999999999998876521 22
Q ss_pred -ccEEEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccc
Q 000647 1172 -CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1374)
Q Consensus 1172 -~~i~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~ 1249 (1374)
++++||||+|.+|+ .|++||+.++.... .. ......+.+.++++.+++.+...+.
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~------- 138 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIG----------KK------SVKEAKERAYEMLEKVGLEHRINHR------- 138 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCChhhhhCC-------
Confidence 57999999999985 59999997532100 00 0000122355677777775443332
Q ss_pred cccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHH
Q 000647 1250 LNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQ 1329 (1374)
Q Consensus 1250 ~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~ 1329 (1374)
...||||||||++| |||++++|+++||||||++||.++.+.
T Consensus 139 ---~~~LS~G~~qrv~l------------------------------------aral~~~p~illlDEPt~~LD~~~~~~ 179 (221)
T TIGR02211 139 ---PSELSGGERQRVAI------------------------------------ARALVNQPSLVLADEPTGNLDNNNAKI 179 (221)
T ss_pred ---hhhCCHHHHHHHHH------------------------------------HHHHhCCCCEEEEeCCCCcCCHHHHHH
Confidence 35699999999999 999999999999999999999999988
Q ss_pred HHHHHHh----cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1330 LYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1330 l~~~~~~----~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
+.+.+++ .++|+|+|+|+++.+...|+++.+.+|
T Consensus 180 l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G 217 (221)
T TIGR02211 180 IFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDG 217 (221)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCC
Confidence 7775542 489999999999888888888888554
No 345
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-33 Score=302.15 Aligned_cols=160 Identities=31% Similarity=0.469 Sum_probs=144.1
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEEe
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP 519 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v~ 519 (1374)
++++|+++.|++ +++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...++.++|+|
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (173)
T cd03230 1 IEVRNLSKRYGK-KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYLP 79 (173)
T ss_pred CEEEEEEEEECC-eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEEe
Confidence 468999998864 579999999999999999999999999999999999999999999999864 13456899999
Q ss_pred cCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCC
Q 000647 520 QRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPK 598 (1374)
Q Consensus 520 Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ 598 (1374)
|+|.++.+ |++||+. ||||||||++||||++.+|+
T Consensus 80 q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~ 115 (173)
T cd03230 80 EEPSLYENLTVRENLK--------------------------------------------LSGGMKQRLALAQALLHDPE 115 (173)
T ss_pred cCCccccCCcHHHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCC
Confidence 99988775 8888863 89999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 599 FAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 599 illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++||||||++||+.+.+.+.+.+++ .|.|+|++||+.+.+. .+|+++++++
T Consensus 116 illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~ 170 (173)
T cd03230 116 LLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNN 170 (173)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeC
Confidence 9999999999999999999888764 3789999999999886 7999999975
No 346
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=9.8e-34 Score=322.35 Aligned_cols=198 Identities=21% Similarity=0.293 Sum_probs=162.1
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----c-c------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----S-D------ 510 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~-~------ 510 (1374)
..++++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ . .
T Consensus 5 ~~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 5 PLLSVRGLTKLYGP-RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred ceEEEeeeEEEcCC-ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 36899999999964 679999999999999999999999999999999999999999999999864 1 1
Q ss_pred ---ccccEEEEecCCC--CC-cCCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCChh-HHhcCCCCccccCCCCCChh
Q 000647 511 ---LNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEY-LLDRYPPEKEINWGDELSLG 582 (1374)
Q Consensus 511 ---~~~~i~~v~Q~p~--l~-~~Tv~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~~~~~~g~~LSgG 582 (1374)
.++.++|+||+|. ++ ..|+.+|+.++..... ........++.++++.+++.+ ..++.+ .+||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--------~~LS~G 155 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLP--------TTFSGG 155 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCC--------ccCCHH
Confidence 1346999999984 33 3588888865321100 000112345678888999863 555544 689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 583 EQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 583 qkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||++|||||+++|+++||||||++||+.+.+.+.+.+++ .|.|+|+|||+++.+. .+|+++++++
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~ 227 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQ 227 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999999999999999999887753 3889999999999986 7999999975
No 347
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-34 Score=321.70 Aligned_cols=205 Identities=21% Similarity=0.288 Sum_probs=163.9
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++......+++++||||
T Consensus 3 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 81 (239)
T cd03296 3 IEVRNVSKRFGD-FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQ 81 (239)
T ss_pred EEEEeEEEEECC-EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEec
Confidence 789999999975 5799999999999999999999999999999999999999999999999988765444567999999
Q ss_pred CCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
+|.+|. .|++||+.++..... ..... .....++.+.++++.++|.+...+. ...||+
T Consensus 82 ~~~~~~~~tv~e~l~~~~~~~~----------~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 139 (239)
T cd03296 82 HYALFRHMTVFDNVAFGLRVKP----------RSERP--PEAEIRAKVHELLKLVQLDWLADRY----------PAQLSG 139 (239)
T ss_pred CCcccCCCCHHHHHhhhhhhcc----------ccccC--CHHHHHHHHHHHHHHcCChhhhhcC----------hhhCCH
Confidence 999986 599999986532100 00000 0000123356677777775444332 356999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| ||||+++|+++||||||++||.++.+.+.+++++
T Consensus 140 G~~qrl~l------------------------------------a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~ 183 (239)
T cd03296 140 GQRQRVAL------------------------------------ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLH 183 (239)
T ss_pred HHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999887776543
Q ss_pred --cCceEEEecCCCCc-hhhccceEEEEcC
Q 000647 1337 --MGITFVTSSQRPAL-IPFHSLELRLIDG 1363 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~-i~~~~~~l~l~~g 1363 (1374)
.|+|+|+|+|+++. ..+.++++.|.+|
T Consensus 184 ~~~~~tvii~sH~~~~~~~~~d~i~~l~~G 213 (239)
T cd03296 184 DELHVTTVFVTHDQEEALEVADRVVVMNKG 213 (239)
T ss_pred HHcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 38999999999975 4668888888554
No 348
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-34 Score=314.68 Aligned_cols=187 Identities=25% Similarity=0.362 Sum_probs=158.9
Q ss_pred eeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----------cccccEEEE
Q 000647 449 GVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEIFYV 518 (1374)
Q Consensus 449 ~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----------~~~~~i~~v 518 (1374)
||++.|++ +.+ |+||+|++ |+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+
T Consensus 5 ~l~~~~~~-~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~ 80 (214)
T cd03297 5 DIEKRLPD-FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKIGLV 80 (214)
T ss_pred eeeEecCC-eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcEEEE
Confidence 89999965 444 99999999 99999999999999999999999999999999988531 134679999
Q ss_pred ecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000647 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 519 ~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1374)
||++.++. .|++||+.++.... .....++++.++++.+++.+..++.+ .+||||||||++||||++++|
T Consensus 81 ~q~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~p 150 (214)
T cd03297 81 FQQYALFPHLNVRENLAFGLKRK--RNREDRISVDELLDLLGLDHLLNRYP--------AQLSGGEKQRVALARALAAQP 150 (214)
T ss_pred ecCCccCCCCCHHHHHHHHHhhC--CHHHHHHHHHHHHHHcCCHhHhhcCc--------ccCCHHHHHHHHHHHHHhcCC
Confidence 99998885 59999998753211 01112356788999999988777755 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|+++++++
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (214)
T cd03297 151 ELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMED 207 (214)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEEC
Confidence 99999999999999999999887754 3899999999999874 7999999975
No 349
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.5e-34 Score=314.38 Aligned_cols=194 Identities=20% Similarity=0.275 Sum_probs=162.4
Q ss_pred CCCCCCCCCEEEeeeEEeCCCc-ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--
Q 000647 1091 WNSTDYQDSISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-- 1167 (1374)
Q Consensus 1091 w~~~~~~g~I~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-- 1167 (1374)
||. ++.|+++|+++.|+.. +++++|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++.+.
T Consensus 1 ~~~---~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~ 77 (207)
T cd03369 1 WPE---HGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPL 77 (207)
T ss_pred CCC---CCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCH
Confidence 666 5789999999999863 5799999999999999999999999999999999999999999999999988655
Q ss_pred cCCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCc
Q 000647 1168 AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 1247 (1374)
Q Consensus 1168 ~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gld 1247 (1374)
...|++|+||||+|.+|++|+++|+.+.... .++++.+.++ ++
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~~~l~~~~~~-----------------------~~~~~~~~l~--------------~~ 120 (207)
T cd03369 78 EDLRSSLTIIPQDPTLFSGTIRSNLDPFDEY-----------------------SDEEIYGALR--------------VS 120 (207)
T ss_pred HHHHhhEEEEecCCcccCccHHHHhcccCCC-----------------------CHHHHHHHhh--------------cc
Confidence 2346689999999999999999999642111 1122223322 11
Q ss_pred cccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHH
Q 000647 1248 ANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVE 1327 (1374)
Q Consensus 1248 t~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e 1327 (1374)
.+...||+|||||++| |||++++|+++||||||++||+++.
T Consensus 121 ---~~~~~LS~G~~qrv~l------------------------------------aral~~~p~llllDEP~~~LD~~~~ 161 (207)
T cd03369 121 ---EGGLNLSQGQRQLLCL------------------------------------ARALLKRPRVLVLDEATASIDYATD 161 (207)
T ss_pred ---CCCCcCCHHHHHHHHH------------------------------------HHHHhhCCCEEEEeCCcccCCHHHH
Confidence 1346799999999999 9999999999999999999999999
Q ss_pred HHHHHHHHh--cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1328 EQLYRLAKD--MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1328 ~~l~~~~~~--~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
+.+.+++++ .++|+|.|+|+++.+...|+++.|.+|
T Consensus 162 ~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g 199 (207)
T cd03369 162 ALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAG 199 (207)
T ss_pred HHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECC
Confidence 888876654 389999999999888778999999654
No 350
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.1e-34 Score=318.83 Aligned_cols=203 Identities=18% Similarity=0.241 Sum_probs=163.2
Q ss_pred EEEeeeEEeCCCc-ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEEEe
Q 000647 1100 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYV 1177 (1374)
Q Consensus 1100 I~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~~V 1177 (1374)
|+++||++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++... ...++++++|
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 5789999999763 6799999999999999999999999999999999999999999999999988654 3345679999
Q ss_pred cCCCCCC-CcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCC
Q 000647 1178 PQRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1374)
Q Consensus 1178 pQ~P~Lf-~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~L 1256 (1374)
||+|.+| ..|+++|+.++... .+. ......+.++++++.++|.+..+.. ...|
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~L 134 (220)
T cd03263 81 PQFDALFDELTVREHLRFYARL----------KGL------PKSEIKEEVELLLRVLGLTDKANKR----------ARTL 134 (220)
T ss_pred cCcCCccccCCHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHHcCCHHHHhCh----------hhhC
Confidence 9999998 57999999754210 000 0000123356677777775443221 3569
Q ss_pred ChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh
Q 000647 1257 SLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD 1336 (1374)
Q Consensus 1257 SgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~ 1336 (1374)
|+|||||++| |||++++|+++||||||++||..+.+.+.+.+++
T Consensus 135 S~G~~qrv~l------------------------------------a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~ 178 (220)
T cd03263 135 SGGMKRKLSL------------------------------------AIALIGGPSVLLLDEPTSGLDPASRRAIWDLILE 178 (220)
T ss_pred CHHHHHHHHH------------------------------------HHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999888776653
Q ss_pred --cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1337 --MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.++|+|.++|+++.+ ++.|+++.+.+|+
T Consensus 179 ~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 179 VRKGRSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred HhcCCEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 368999999999876 5689999986553
No 351
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=329.54 Aligned_cols=200 Identities=23% Similarity=0.257 Sum_probs=164.4
Q ss_pred EEEeeeEEeCCCc----ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc----CCc
Q 000647 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA----GSG 1171 (1374)
Q Consensus 1100 I~f~~V~~~yp~~----~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~----~~r 1171 (1374)
|+++||++.|+.. +++|+|+||+|++||.+||+||||||||||+++|.|+.+|.+|+|.+||.++.+.. ..+
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 7899999999752 47999999999999999999999999999999999999999999999999987631 346
Q ss_pred ccEEEecCCC--CCCCcchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCc--hhhhhhcc
Q 000647 1172 CGIFYVPQRP--YTCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS--YLLEREEV 1244 (1374)
Q Consensus 1172 ~~i~~VpQ~P--~Lf~GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~--~~v~~~~~ 1244 (1374)
.+|+||||+| .+|..|++|||.++... +.++ ..+.+.++++.++|. ++..+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~-------------------~~~~~~~~l~~~gL~~~~~~~~--- 140 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEE-------------------IENRVKRAMNIVGLDYEDYKDK--- 140 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHH-------------------HHHHHHHHHHHcCCCchhhccC---
Confidence 7899999999 57889999999764210 0000 122356678877774 22221
Q ss_pred CCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCH
Q 000647 1245 GWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSV 1324 (1374)
Q Consensus 1245 Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~ 1324 (1374)
....||||||||++| ||||+.+|++|||||||++||+
T Consensus 141 -------~~~~LSgGq~qrv~i------------------------------------AraL~~~P~llllDEPt~gLD~ 177 (287)
T PRK13637 141 -------SPFELSGGQKRRVAI------------------------------------AGVVAMEPKILILDEPTAGLDP 177 (287)
T ss_pred -------CcccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEECCccCCCH
Confidence 246799999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1325 DVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1325 ~~e~~l~~~~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.+.+.+.+++++ .|.|+|.|+|++..+ .+.|+++.+.+|+
T Consensus 178 ~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~ 222 (287)
T PRK13637 178 KGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGK 222 (287)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 999887776542 489999999999766 6899999997654
No 352
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-34 Score=326.33 Aligned_cols=199 Identities=21% Similarity=0.208 Sum_probs=163.6
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc-------
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~------- 509 (1374)
...++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+.
T Consensus 37 ~~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 37 KPHVVAKNFSIYYG-EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred ceEEEEeeeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 34699999999986 4579999999999999999999999999999999999864 4999999998531
Q ss_pred -cccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCh----hHHhcCCCCccccCCCCCChhH
Q 000647 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLE----YLLDRYPPEKEINWGDELSLGE 583 (1374)
Q Consensus 510 -~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~----~~~~~~~~~~~~~~g~~LSgGq 583 (1374)
.+++.++|+||+|.++..|++||+.++....... ....++++.++++.+++. +..++.+ ..|||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~--------~~LSgGq 187 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNA--------LGLSGGQ 187 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCCh--------hhCCHHH
Confidence 2456899999999988889999998863211100 011134566778888874 3333332 6899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||++|||||+++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~ 256 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYE 256 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999998875 3689999999999875 6999999985
No 353
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=4.6e-34 Score=315.84 Aligned_cols=201 Identities=20% Similarity=0.286 Sum_probs=162.0
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++||+++|+. +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++......+.+++++||
T Consensus 1 i~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q 79 (213)
T cd03301 1 VELENVTKRFGN-VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQ 79 (213)
T ss_pred CEEEeeEEEECC-eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEec
Confidence 578999999865 5799999999999999999999999999999999999999999999999988765434567999999
Q ss_pred CCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
+|.+|. .|++||+.++.... +. ..+..++++.++++.+++.+..++. ...||+
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 133 (213)
T cd03301 80 NYALYPHMTVYDNIAFGLKLR----------KV------PKDEIDERVREVAELLQIEHLLDRK----------PKQLSG 133 (213)
T ss_pred ChhhccCCCHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCCHHHHhCC----------hhhCCH
Confidence 999985 59999997652100 00 0000123355677777775544332 356999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| |||++++|+++||||||++||.++.+.+.+.+++
T Consensus 134 G~~qr~~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~ 177 (213)
T cd03301 134 GQRQRVAL------------------------------------GRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQ 177 (213)
T ss_pred HHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999887775543
Q ss_pred --cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1337 --MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
.|+|+|+|+|++..+ .+.++++.|.+|
T Consensus 178 ~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g 207 (213)
T cd03301 178 QRLGTTTIYVTHDQVEAMTMADRIAVMNDG 207 (213)
T ss_pred HHcCCEEEEEeCCHHHHHHhcCeEEEEECC
Confidence 489999999999765 467888888554
No 354
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=328.30 Aligned_cols=201 Identities=25% Similarity=0.322 Sum_probs=166.8
Q ss_pred CEEEeeeEEeCCC--cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccE
Q 000647 1099 SISFSKLDIITPS--QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 1174 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~--~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i 1174 (1374)
.|+++||++.|+. .+.+|+|+||+|++||.+||+||||||||||+++|.|+++|.+|+|.+||.++... ...|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 4899999999974 35699999999999999999999999999999999999999999999999998754 2356689
Q ss_pred EEecCCCC--CCCcchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccc
Q 000647 1175 FYVPQRPY--TCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1374)
Q Consensus 1175 ~~VpQ~P~--Lf~GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~ 1249 (1374)
++|||+|. ++..|++|||.++... +.+ ..++.+.++++.++|.++.++.
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~-------------------~~~~~~~~~l~~~gL~~~~~~~------- 137 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHE-------------------EMKERVNEALELVGMQDFKERE------- 137 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHH-------------------HHHHHHHHHHHHCCCHhHhhCC-------
Confidence 99999993 5677999999875310 010 0123456788888886655443
Q ss_pred cccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHH
Q 000647 1250 LNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQ 1329 (1374)
Q Consensus 1250 ~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~ 1329 (1374)
...||||||||++| ||||+++|++|||||||++||+.+.+.
T Consensus 138 ---~~~LSgGq~qrv~l------------------------------------Aral~~~p~lLlLDEPt~~LD~~~~~~ 178 (279)
T PRK13650 138 ---PARLSGGQKQRVAI------------------------------------AGAVAMRPKIIILDEATSMLDPEGRLE 178 (279)
T ss_pred ---cccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEECCcccCCHHHHHH
Confidence 35799999999999 999999999999999999999999987
Q ss_pred HHHHHHh----cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1330 LYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1330 l~~~~~~----~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
+.+.+++ .|+|+|+|+|++..+.+.|+++.+.+|+
T Consensus 179 l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~ 217 (279)
T PRK13650 179 LIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQ 217 (279)
T ss_pred HHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 7765432 4899999999998888899999996554
No 355
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=320.28 Aligned_cols=197 Identities=21% Similarity=0.255 Sum_probs=162.9
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc-------cc
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------DL 511 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~-------~~ 511 (1374)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .+
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 81 (249)
T PRK14253 3 KFNIENLDLFYG-ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADL 81 (249)
T ss_pred eEEEeccEEEEC-CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHH
Confidence 588999999986 46799999999999999999999999999999999999986 599999998531 24
Q ss_pred cccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhHHHH
Q 000647 512 NKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQR 586 (1374)
Q Consensus 512 ~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGqkQR 586 (1374)
++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+. .++. ..+||||||||
T Consensus 82 ~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~LS~G~~qr 153 (249)
T PRK14253 82 RIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSH--------AFGLSGGQQQR 153 (249)
T ss_pred HhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcC--------cccCCHHHHHH
Confidence 56799999999988899999998753211100 01112455677888887542 2332 26899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 587 lalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++||||++.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~ 219 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLM 219 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999888765 3689999999999876 6999999985
No 356
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-34 Score=322.49 Aligned_cols=211 Identities=26% Similarity=0.295 Sum_probs=165.5
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCcccE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r~~i 1174 (1374)
|+++||++.|++.+.+++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..++++
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 478999999975467999999999999999999999999999999999999999999999999887542 345679
Q ss_pred EEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1175 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1175 ~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
+||||+|.+|. .|+++|+.++......... ...+. .....++.+.++++.+++.+...+ ..
T Consensus 81 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~ 142 (241)
T cd03256 81 GMIFQQFNLIERLSVLENVLSGRLGRRSTWR--SLFGL------FPKEEKQRALAALERVGLLDKAYQ----------RA 142 (241)
T ss_pred EEEcccCcccccCcHHHHHHhhhcccchhhh--hhccc------CcHHHHHHHHHHHHHcCChhhhCC----------Cc
Confidence 99999999887 6999999765321000000 00000 001113446677887777544322 24
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||||||||++| |||++++|++||||||||+||..+.+.+.+.
T Consensus 143 ~~LS~G~~qrv~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~ 186 (241)
T cd03256 143 DQLSGGQQQRVAI------------------------------------ARALMQQPKLILADEPVASLDPASSRQVMDL 186 (241)
T ss_pred ccCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCccccCCHHHHHHHHHH
Confidence 6799999999999 9999999999999999999999999877765
Q ss_pred HHh----cCceEEEecCCCCchh-hccceEEEEcCC
Q 000647 1334 AKD----MGITFVTSSQRPALIP-FHSLELRLIDGE 1364 (1374)
Q Consensus 1334 ~~~----~~~TvI~IaHRl~~i~-~~~~~l~l~~g~ 1364 (1374)
+++ .|+|+|+|+|+++.+. +.|+++.+.+|+
T Consensus 187 l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~ 222 (241)
T cd03256 187 LKRINREEGITVIVSLHQVDLAREYADRIVGLKDGR 222 (241)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 543 4899999999998776 889999996554
No 357
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=336.32 Aligned_cols=202 Identities=21% Similarity=0.283 Sum_probs=170.1
Q ss_pred CCCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEE
Q 000647 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFY 1176 (1374)
Q Consensus 1097 ~g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~ 1176 (1374)
...|+++||++.|.+ ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+....+++|++
T Consensus 4 ~~~l~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 82 (351)
T PRK11432 4 KNFVVLKNITKRFGS-NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICM 82 (351)
T ss_pred CcEEEEEeEEEEECC-eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 346999999999964 6699999999999999999999999999999999999999999999999999876544567999
Q ss_pred ecCCCCCCCc-chHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccc
Q 000647 1177 VPQRPYTCLG-TLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1374)
Q Consensus 1177 VpQ~P~Lf~G-TlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~ 1252 (1374)
|||+|.||+. |++|||.|+... ..++ .++.+.++++.++|.++.++.
T Consensus 83 vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~-------------------~~~~v~~~l~~~gl~~~~~r~---------- 133 (351)
T PRK11432 83 VFQSYALFPHMSLGENVGYGLKMLGVPKEE-------------------RKQRVKEALELVDLAGFEDRY---------- 133 (351)
T ss_pred EeCCcccCCCCCHHHHHHHHHhHcCCCHHH-------------------HHHHHHHHHHHcCCchhhcCC----------
Confidence 9999999975 999999987531 0110 123466788888887665443
Q ss_pred ccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH
Q 000647 1253 EDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR 1332 (1374)
Q Consensus 1253 g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~ 1332 (1374)
...||||||||+|| ||||+++|++||||||||+||..+.+.+.+
T Consensus 134 ~~~LSgGq~QRVaL------------------------------------ARaL~~~P~lLLLDEP~s~LD~~~r~~l~~ 177 (351)
T PRK11432 134 VDQISGGQQQRVAL------------------------------------ARALILKPKVLLFDEPLSNLDANLRRSMRE 177 (351)
T ss_pred hhhCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEcCCcccCCHHHHHHHHH
Confidence 35799999999999 999999999999999999999999987766
Q ss_pred HHH----hcCceEEEecCCCCc-hhhccceEEEEcCC
Q 000647 1333 LAK----DMGITFVTSSQRPAL-IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1333 ~~~----~~~~TvI~IaHRl~~-i~~~~~~l~l~~g~ 1364 (1374)
.++ +.|+|+|.|+|+++. ..+.|+++.+.+|+
T Consensus 178 ~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~ 214 (351)
T PRK11432 178 KIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGK 214 (351)
T ss_pred HHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 543 348999999999965 57889999996553
No 358
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=320.74 Aligned_cols=198 Identities=22% Similarity=0.245 Sum_probs=161.9
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc--C---CccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP--L---VSGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~--~---~~G~I~~~g~~~-------- 509 (1374)
..++++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+ | ++|+|.++|.+.
T Consensus 4 ~~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 4 KIITSSDVHLFYG-KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred ceEEEEeEEEEEC-CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 3689999999996 4679999999999999999999999999999999999975 4 599999998531
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChh----HHhcCCCCccccCCCCCChhHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~----~~~~~~~~~~~~~g~~LSgGqk 584 (1374)
.+++.++|+||+|.++..|+++|+.++....... ....++++.+.++.+++.. ..++. ..+||||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--------~~~LS~Gq~ 154 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHES--------ALSLSGGQQ 154 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcC--------cccCCHHHH
Confidence 2356799999999988899999998753211100 0111234566778777642 23332 268999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||++||||++++|+++||||||++||+.+.+.+.+.+++ .+.|+|+|||+++.+. .+|+++++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~ 222 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLT 222 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999988865 2689999999999875 7999999975
No 359
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.1e-33 Score=334.90 Aligned_cols=188 Identities=22% Similarity=0.294 Sum_probs=160.7
Q ss_pred eeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc----------cccccEEEE
Q 000647 449 GVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS----------DLNKEIFYV 518 (1374)
Q Consensus 449 ~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~----------~~~~~i~~v 518 (1374)
|+++.|++ .. + |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. ..++.++|+
T Consensus 4 ~l~~~~~~-~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v 80 (354)
T TIGR02142 4 RFSKRLGD-FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYV 80 (354)
T ss_pred EEEEEECC-EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEE
Confidence 78888853 34 4 99999999999999999999999999999999999999999998541 235679999
Q ss_pred ecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000647 519 PQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 519 ~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1374)
||++.++. .|++||+.|+..... ....++++.++++.++|.++.++.+ .+||||||||++|||||+++|
T Consensus 81 ~q~~~l~~~~tv~enl~~~~~~~~--~~~~~~~~~~~l~~~gL~~~~~~~~--------~~LSgGqkqRvalAraL~~~p 150 (354)
T TIGR02142 81 FQEARLFPHLSVRGNLRYGMKRAR--PSERRISFERVIELLGIGHLLGRLP--------GRLSGGEKQRVAIGRALLSSP 150 (354)
T ss_pred ecCCccCCCCcHHHHHHHHhhccC--hhHHHHHHHHHHHHcCChhHhcCCh--------hhCCHHHHHHHHHHHHHHcCC
Confidence 99999886 499999998643211 1112345788999999998888876 689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+++||||||++||+.+.+.+++.+++ .|+|+|+|||+++.+. .+|++++|++
T Consensus 151 ~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~ 207 (354)
T TIGR02142 151 RLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLED 207 (354)
T ss_pred CEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 99999999999999999999887764 3899999999999875 6999999986
No 360
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-34 Score=316.41 Aligned_cols=202 Identities=22% Similarity=0.226 Sum_probs=163.6
Q ss_pred EEEeeeEEeCCCc---ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEE
Q 000647 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFY 1176 (1374)
Q Consensus 1100 I~f~~V~~~yp~~---~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~ 1176 (1374)
|+++|+++.|++. +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.. .+.+++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~---~~~~i~~ 77 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG---PGPDRGY 77 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc---ccCcEEE
Confidence 4789999999752 679999999999999999999999999999999999999999999999988763 3567999
Q ss_pred ecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1177 VPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
|||+|.+|. .|++||+.++.... +. .....++++.++++.+++.+...+. ...
T Consensus 78 v~q~~~~~~~~tv~e~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 131 (220)
T cd03293 78 VFQQDALLPWLTVLDNVALGLELQ----------GV------PKAEARERAEELLELVGLSGFENAY----------PHQ 131 (220)
T ss_pred EecccccccCCCHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHHcCChhhhhCC----------ccc
Confidence 999999987 69999997642100 00 0001123466778888876554433 246
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||||||||++| ||||+++|+++||||||++||+++.+.+.+.++
T Consensus 132 LSgG~~qrl~l------------------------------------a~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~ 175 (220)
T cd03293 132 LSGGMRQRVAL------------------------------------ARALAVDPDVLLLDEPFSALDALTREQLQEELL 175 (220)
T ss_pred CCHHHHHHHHH------------------------------------HHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999988877654
Q ss_pred h----cCceEEEecCCCCc-hhhccceEEEEcCCCC
Q 000647 1336 D----MGITFVTSSQRPAL-IPFHSLELRLIDGEGN 1366 (1374)
Q Consensus 1336 ~----~~~TvI~IaHRl~~-i~~~~~~l~l~~g~g~ 1366 (1374)
+ .|+|+|+|+|+++. .++.|+++.|.+++|.
T Consensus 176 ~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 176 DIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred HHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 2 48999999999975 5678999999533553
No 361
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=319.70 Aligned_cols=197 Identities=24% Similarity=0.270 Sum_probs=163.4
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc--------c
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS--------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~--------~ 510 (1374)
.|+++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. .
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~ 81 (250)
T PRK14262 3 IIEIENFSAYYG-EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTE 81 (250)
T ss_pred eEEEEeeEEEeC-CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHH
Confidence 589999999986 46799999999999999999999999999999999999984 899999998541 2
Q ss_pred ccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhHHH
Q 000647 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGEQQ 585 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGqkQ 585 (1374)
+++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+. .++. ..+|||||||
T Consensus 82 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~Gq~q 153 (250)
T PRK14262 82 YRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKP--------GTRLSGGQQQ 153 (250)
T ss_pred hhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCC--------hhhcCHHHHH
Confidence 356799999999988899999998753211100 11123456778888888643 3332 2689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 586 RlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|++||||++.+|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+ ..+|+++++++
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYR 220 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999888765 378999999999975 57999999985
No 362
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=320.40 Aligned_cols=200 Identities=21% Similarity=0.227 Sum_probs=162.9
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~-------- 509 (1374)
..|+++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 9 ~~l~i~~v~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 9 TVLRTENLNVYYG-SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred eEEEEeeeEEEEC-CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 4699999999985 4579999999999999999999999999999999999986 4799999998531
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
.++++++|+||+|.++..|+.||+.++...... ....++++.++++.+++.+.++... .....+||||||||++|
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGY-KGDMDELVERSLRQAALWDEVKDKL----KQSGLSLSGGQQQRLCI 162 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCc-chHHHHHHHHHHHHhCchhhHHHHh----cCCcccCCHHHHHHHHH
Confidence 235679999999998888999999886432111 1112345667788888754332110 01136899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEec
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLD 648 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~ 648 (1374)
||||+++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+ ..||++++|+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~ 224 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFN 224 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999988864 368999999999876 5789999997
No 363
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.8e-34 Score=316.48 Aligned_cols=200 Identities=28% Similarity=0.417 Sum_probs=159.4
Q ss_pred EEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecCC
Q 000647 1101 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQR 1180 (1374)
Q Consensus 1101 ~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ~ 1180 (1374)
+++||++.|++ +.+++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.. .|.+++||||+
T Consensus 1 ~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~---~~~~i~~v~q~ 76 (213)
T cd03235 1 EVEDLTVSYGG-HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEK---ERKRIGYVPQR 76 (213)
T ss_pred CcccceeEECC-EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHH---HHhheEEeccc
Confidence 36799998875 569999999999999999999999999999999999999999999999987752 35679999999
Q ss_pred CCC---CCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1181 PYT---CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1181 P~L---f~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|.+ |..|++||+.++...... ..+. .....++.+.++++.+++.+..++. ...||
T Consensus 77 ~~~~~~~~~tv~e~l~~~~~~~~~------~~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS 134 (213)
T cd03235 77 RSIDRDFPISVRDVVLMGLYGHKG------LFRR------LSKADKAKVDEALERVGLSELADRQ----------IGELS 134 (213)
T ss_pred cccccCCCCcHHHHHHhccccccc------cccC------CCHHHHHHHHHHHHHcCCHHHHhCC----------cccCC
Confidence 987 568999999765321000 0000 0001133466788888876544332 35799
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh-
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD- 1336 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~- 1336 (1374)
||||||++| ||||+++|+++||||||++||+++.+.+.+.+++
T Consensus 135 gG~~qrv~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~ 178 (213)
T cd03235 135 GGQQQRVLL------------------------------------ARALVQDPDLLLLDEPFAGVDPKTQEDIYELLREL 178 (213)
T ss_pred HHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999877765543
Q ss_pred --cCceEEEecCCCCch-hhccceEEEEc
Q 000647 1337 --MGITFVTSSQRPALI-PFHSLELRLID 1362 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~i-~~~~~~l~l~~ 1362 (1374)
.|+|+|.|+|+++.+ ++.|+++.+.+
T Consensus 179 ~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 207 (213)
T cd03235 179 RREGMTILVVTHDLGLVLEYFDRVLLLNR 207 (213)
T ss_pred HhcCCEEEEEeCCHHHHHHhcCEEEEEcC
Confidence 589999999999776 56899998843
No 364
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=321.28 Aligned_cols=202 Identities=21% Similarity=0.218 Sum_probs=163.2
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~-------- 509 (1374)
..++++|+++.|+ ++++++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 6 ~~l~~~~l~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (259)
T PRK14260 6 PAIKVKDLSFYYN-TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININ 84 (259)
T ss_pred ceEEEEEEEEEEC-CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchH
Confidence 3689999999985 46799999999999999999999999999999999999985 489999998541
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1374)
.+++.++|+||+|.++..|++||+.++...... .....++.+.++++.+++.+.+.... ......||||||||++
T Consensus 85 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LS~G~~qrv~ 160 (259)
T PRK14260 85 RLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKL----NKSALGLSGGQQQRLC 160 (259)
T ss_pred hhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHh----cCCcccCCHHHHHHHH
Confidence 234679999999998889999999875321110 00112345667888888853222110 0113689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 589 lARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||||+++|+++||||||++||+.+...+.+.+++ .++|+|++||+++.+. .+|++++|+.
T Consensus 161 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~ 224 (259)
T PRK14260 161 IARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFST 224 (259)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEec
Confidence 99999999999999999999999999999988865 3689999999999875 6999999973
No 365
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=322.56 Aligned_cols=199 Identities=21% Similarity=0.259 Sum_probs=165.0
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc-------
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~------- 509 (1374)
.+.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 23 ~~~l~~~nl~~~~~-~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~ 101 (272)
T PRK14236 23 QTALEVRNLNLFYG-DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDV 101 (272)
T ss_pred CcEEEEEEEEEEEC-CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCH
Confidence 45799999999985 46799999999999999999999999999999999999984 899999998541
Q ss_pred -cccccEEEEecCCCCCcCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCChhH----HhcCCCCccccCCCCCChhH
Q 000647 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYL----LDRYPPEKEINWGDELSLGE 583 (1374)
Q Consensus 510 -~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~L~~~----~~~~~~~~~~~~g~~LSgGq 583 (1374)
.+++.++|+||++.++..|++||+.++...... .....++++.++++.+++.+. .++. ..+|||||
T Consensus 102 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~~LS~Gq 173 (272)
T PRK14236 102 AELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHEN--------AFGLSGGQ 173 (272)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCC--------cccCCHHH
Confidence 235789999999998888999999875321110 001123456778888888643 2332 36899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|||++||||++++|+++||||||++||+.+...+.+.+++ .+.|+|++||+++.+ ..+|+++++++
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~ 242 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYM 242 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEEC
Confidence 9999999999999999999999999999999999888764 378999999999987 47999999985
No 366
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.4e-33 Score=335.65 Aligned_cols=200 Identities=32% Similarity=0.442 Sum_probs=172.1
Q ss_pred CCcEEEeeeEEEcCC------C----CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC---
Q 000647 442 ANYIEFSGVKVVTPT------G----NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG--- 508 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~------~----~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~--- 508 (1374)
.+.++++|+++.|.. + ..+++|+||++++||+++|||+||||||||.|+|+|+.+|++|+|.++|.+
T Consensus 278 ~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~ 357 (539)
T COG1123 278 EPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDL 357 (539)
T ss_pred CceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCccccc
Confidence 456889999998863 1 368999999999999999999999999999999999999999999999864
Q ss_pred -----ccccccEEEEecCCCC---CcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChh-HHhcCCCCccccCCCC
Q 000647 509 -----SDLNKEIFYVPQRPYT---AVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY-LLDRYPPEKEINWGDE 578 (1374)
Q Consensus 509 -----~~~~~~i~~v~Q~p~l---~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~-~~~~~~~~~~~~~g~~ 578 (1374)
...++++-+|+|+|+- +..||+++|..|....... .....+++.++++.++|.. +.+++| ++
T Consensus 358 ~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP--------~e 429 (539)
T COG1123 358 TGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYP--------HE 429 (539)
T ss_pred ccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCc--------hh
Confidence 1345789999999984 3479999998876532211 1223346888999999987 789998 68
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 579 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 579 LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||||||+||||||..+|+++|+|||||+||+.+...+.+.+++ .|.|+|+||||+..++ .||+|.+|.+
T Consensus 430 lSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~ 505 (539)
T COG1123 430 LSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYD 505 (539)
T ss_pred cCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEEC
Confidence 999999999999999999999999999999999999999888754 5999999999999997 6999999986
No 367
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=321.05 Aligned_cols=198 Identities=24% Similarity=0.258 Sum_probs=163.3
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEE
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~ 1176 (1374)
.|+++||++.|++ +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...|+.++|
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~ 81 (241)
T PRK14250 3 EIEFKEVSYSSFG-KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGM 81 (241)
T ss_pred eEEEEeEEEEeCC-eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEE
Confidence 4889999999865 5699999999999999999999999999999999999999999999999988764 244668999
Q ss_pred ecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCc-hhhhhhccCCccccccccC
Q 000647 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~-~~v~~~~~Gldt~~~~g~~ 1255 (1374)
+||+|.+|+.|+++|+.++..... ..++++.++++.+++. ++..+ ....
T Consensus 82 ~~q~~~~~~~tv~e~l~~~~~~~~--------------------~~~~~~~~~l~~~~l~~~~~~~----------~~~~ 131 (241)
T PRK14250 82 VFQQPHLFEGTVKDNIEYGPMLKG--------------------EKNVDVEYYLSIVGLNKEYATR----------DVKN 131 (241)
T ss_pred EecCchhchhhHHHHHhcchhhcC--------------------cHHHHHHHHHHHcCCCHHHhhC----------Cccc
Confidence 999999999999999976421100 0123455677777763 22221 2457
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||||||||++| |||++++|+++||||||++||.++.+.+.+.++
T Consensus 132 LS~G~~qrl~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~ 175 (241)
T PRK14250 132 LSGGEAQRVSI------------------------------------ARTLANNPEVLLLDEPTSALDPTSTEIIEELIV 175 (241)
T ss_pred CCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999987776554
Q ss_pred h----cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1336 D----MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1336 ~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
+ .|+|+|+|+|+++.+ .+.|+++.+.+|
T Consensus 176 ~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 176 KLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred HHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 3 489999999999765 478999999654
No 368
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=320.72 Aligned_cols=202 Identities=22% Similarity=0.263 Sum_probs=163.4
Q ss_pred CCCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc------
Q 000647 441 EANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------ 509 (1374)
Q Consensus 441 ~~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~------ 509 (1374)
....|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 17 ~~~~l~~~nl~~~~~-~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 17 DHSVFEVEGVKVFYG-GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred CCceEEEeeEEEEeC-CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 345899999999986 46799999999999999999999999999999999999863 699999998541
Q ss_pred --cccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHH
Q 000647 510 --DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRL 587 (1374)
Q Consensus 510 --~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRl 587 (1374)
.+++.++|+||++.++..|+.||+.++...... ....++.+.++++.+++.+.+.... ......||||||||+
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LSgGq~qrv 170 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGY-KGNLDELVEDSLRRAAIWEEVKDKL----KEKGTALSGGQQQRL 170 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCc-hHHHHHHHHHHHHHcccchhhHHHh----cCCcccCCHHHHHHH
Confidence 235689999999998888999999875321110 0112344567788888753322100 011368999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEec
Q 000647 588 GMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLD 648 (1374)
Q Consensus 588 alARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~ 648 (1374)
+|||||+++|+++||||||++||+.+.+.+.+.+++ .+.|+|++||+++.+ ..+|++++|+
T Consensus 171 ~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~ 234 (274)
T PRK14265 171 CIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFN 234 (274)
T ss_pred HHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 999999999999999999999999999999998875 368999999999887 4799999997
No 369
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-33 Score=300.85 Aligned_cols=160 Identities=38% Similarity=0.642 Sum_probs=144.7
Q ss_pred EEEeeeEEEcCCC-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 445 IEFSGVKVVTPTG-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 445 i~~~~v~~~~~~~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
++++|+++.|++. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..+++.++|
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 4689999998654 379999999999999999999999999999999999999999999999854 123567999
Q ss_pred EecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCC
Q 000647 518 VPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKP 597 (1374)
Q Consensus 518 v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p 597 (1374)
+||+|.++..|+.||+ ||||||||++||||++++|
T Consensus 81 ~~~~~~~~~~t~~e~l---------------------------------------------LS~G~~~rl~la~al~~~p 115 (171)
T cd03228 81 VPQDPFLFSGTIRENI---------------------------------------------LSGGQRQRIAIARALLRDP 115 (171)
T ss_pred EcCCchhccchHHHHh---------------------------------------------hCHHHHHHHHHHHHHhcCC
Confidence 9999988888888876 8999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHhhccEEEEecC
Q 000647 598 KFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 598 ~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+++||||||++||+.+...+.+.+++ .++|+|++||+++.+..+|+++++++
T Consensus 116 ~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~ 169 (171)
T cd03228 116 PILILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDD 169 (171)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcC
Confidence 99999999999999999999888865 36899999999999988999999975
No 370
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.5e-34 Score=315.41 Aligned_cols=201 Identities=25% Similarity=0.340 Sum_probs=160.2
Q ss_pred EEeeeEEeCCCc-ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEe
Q 000647 1101 SFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYV 1177 (1374)
Q Consensus 1101 ~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~V 1177 (1374)
+++||++.|++. +.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...+++|+|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 368999988752 5799999999999999999999999999999999999999999999999988654 2345679999
Q ss_pred cCCC--CCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1178 PQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1178 pQ~P--~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
||+| .++..|+++|+.++.... +. .....++.+.++++.+++.+.+++. ...
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 134 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENL----------GL------PEEEIEERVEEALELVGLEGLRDRS----------PFT 134 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHHcCcHhhhcCC----------ccc
Confidence 9999 467889999997542100 00 0000122355677777775444332 357
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||||||||++| ||||+++|+++||||||++||.++.+.+.+.++
T Consensus 135 LSgG~~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~~~~~l~ 178 (211)
T cd03225 135 LSGGQKQRVAI------------------------------------AGVLAMDPDILLLDEPTAGLDPAGRRELLELLK 178 (211)
T ss_pred CCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999988776554
Q ss_pred h---cCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1336 D---MGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1336 ~---~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
+ .|+|+|+|+|++..+. +.|+++.+.+|
T Consensus 179 ~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G 210 (211)
T cd03225 179 KLKAEGKTIIIVTHDLDLLLELADRVIVLEDG 210 (211)
T ss_pred HHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 3 4899999999997765 58999998655
No 371
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.96 Aligned_cols=198 Identities=28% Similarity=0.427 Sum_probs=164.1
Q ss_pred cEEEeeeEEEcCC--------CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------
Q 000647 444 YIEFSGVKVVTPT--------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------ 509 (1374)
Q Consensus 444 ~i~~~~v~~~~~~--------~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------ 509 (1374)
.|+++||++.|++ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 5889999999974 46899999999999999999999999999999999999999999999998641
Q ss_pred ---cccccEEEEecCCC--CC-cCCHHHHhcCCCCCC-cccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCCh
Q 000647 510 ---DLNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSD-QEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSL 581 (1374)
Q Consensus 510 ---~~~~~i~~v~Q~p~--l~-~~Tv~eni~~~~~~~-~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSg 581 (1374)
.+++.++|+||++. ++ ..|+.+|+.++.... .........++.++++.+++. +..++.+ ..|||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--------~~LS~ 154 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRP--------PQLSG 154 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCC--------ccCCh
Confidence 13568999999983 33 469999986542110 000111234578889999996 4566544 68999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 582 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 582 GqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||||++|||||+++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 155 Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~ 227 (268)
T PRK10419 155 GQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDN 227 (268)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999998887753 3889999999999986 6999999975
No 372
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=7.3e-34 Score=316.21 Aligned_cols=199 Identities=25% Similarity=0.304 Sum_probs=162.0
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCcccE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCGI 1174 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r~~i 1174 (1374)
|+++||++.|+..+.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..|+++
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 81 (222)
T PRK10908 2 IRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQI 81 (222)
T ss_pred EEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhhe
Confidence 789999999965578999999999999999999999999999999999999999999999999887652 246689
Q ss_pred EEecCCCCC-CCcchHHHhccCCC---hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1175 FYVPQRPYT-CLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1175 ~~VpQ~P~L-f~GTlR~Nl~yp~~---~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
+|+||+|.+ +..|++||+.++.. .++++ ..+.+.++++.+++.....+.
T Consensus 82 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~-------------------~~~~~~~~l~~~~l~~~~~~~-------- 134 (222)
T PRK10908 82 GMIFQDHHLLMDRTVYDNVAIPLIIAGASGDD-------------------IRRRVSAALDKVGLLDKAKNF-------- 134 (222)
T ss_pred EEEecCccccccccHHHHHHhHHHhcCCCHHH-------------------HHHHHHHHHHHcCChhhhhCC--------
Confidence 999999997 46799999986521 00000 112345667777775443332
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
...||+|||||++| |||++++|+++||||||++||.++.+.+
T Consensus 135 --~~~LS~G~~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l 176 (222)
T PRK10908 135 --PIQLSGGEQQRVGI------------------------------------ARAVVNKPAVLLADEPTGNLDDALSEGI 176 (222)
T ss_pred --chhCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCCCcCCHHHHHHH
Confidence 35799999999999 9999999999999999999999998877
Q ss_pred HHHHHh---cCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1331 YRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1331 ~~~~~~---~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
.+++++ .+.|+|+|+|+++.+. +.|+++.+.+|
T Consensus 177 ~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (222)
T PRK10908 177 LRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDG 213 (222)
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 665542 4899999999998765 57888888544
No 373
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=292.62 Aligned_cols=197 Identities=27% Similarity=0.360 Sum_probs=166.7
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFY 517 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~ 517 (1374)
+|+.+|+++.- .++.+++++||++++||.++|+||||+|||||+|+|+|...|++|++.++|.+ .++.++-+.
T Consensus 1 mi~a~nls~~~-~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 1 MIRAENLSYSL-AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred CeeeeeeEEEe-ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 37889999876 47889999999999999999999999999999999999999999999999976 234577899
Q ss_pred EecCCCC-CcCCHHHHhcCCCCCCcccCCC-CHHH-HHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 518 VPQRPYT-AVGTLRDQLIYPLTSDQEVEPL-THGG-MVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 518 v~Q~p~l-~~~Tv~eni~~~~~~~~~~~~~-~~~~-~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
+||+..+ |.-|++|.+.+|......-... .+++ ..+++..+++..+..+.- ..||||||||+.+||+|.
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y--------~~LSGGEqQRVqlARvLa 151 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRDY--------RTLSGGEQQRVQLARVLA 151 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccch--------hhcCchHHHHHHHHHHHH
Confidence 9999765 6789999999876433211111 2222 578899999999998854 589999999999999997
Q ss_pred c------CCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 595 H------KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 595 ~------~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+ ++++|+||||||+||......+++..++ .|..|+.|-||+++.. |||+|++|.+
T Consensus 152 Ql~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~ 216 (259)
T COG4559 152 QLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQ 216 (259)
T ss_pred HccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeC
Confidence 5 4569999999999999999998887764 5899999999999974 8999999975
No 374
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-33 Score=302.16 Aligned_cols=162 Identities=29% Similarity=0.379 Sum_probs=145.1
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-c-------cccccEE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-S-------DLNKEIF 516 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~-------~~~~~i~ 516 (1374)
++++|+++.|+ ++++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ . ..++.++
T Consensus 1 i~~~~l~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (178)
T cd03229 1 LELKNVSKRYG-QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRIG 79 (178)
T ss_pred CEEEEEEEEEC-CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcEE
Confidence 46899999985 4679999999999999999999999999999999999999999999999853 1 2346899
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
|+||+|.++. .|++||+.+. ||||||||++||||+++
T Consensus 80 ~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~ 117 (178)
T cd03229 80 MVFQDFALFPHLTVLENIALG------------------------------------------LSGGQQQRVALARALAM 117 (178)
T ss_pred EEecCCccCCCCCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHC
Confidence 9999998775 5999988642 89999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh---c-CCEEEEEccChhhHh-hccEEEEecC
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~---~-~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
+|+++||||||++||+.+...+.+.+++ . ++|+|++||+++.+. .+|+++++++
T Consensus 118 ~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 176 (178)
T cd03229 118 DPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRD 176 (178)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeC
Confidence 9999999999999999999999887754 3 789999999999987 7999999975
No 375
>PRK12369 putative transporter; Reviewed
Probab=100.00 E-value=2.4e-31 Score=307.19 Aligned_cols=283 Identities=15% Similarity=0.181 Sum_probs=247.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 109 ALVGIVVLRTALSNRLAKVQGFLFRAAFLR-------RVPLFFQLISENILLCFLLSTMHSTSKYITGTLSLQFRKIVTK 181 (1374)
Q Consensus 109 ~~~~l~~~~t~ls~~~~~~~~~~~~al~~~-------~~~~f~~~l~~~~~~~~~~~~~~~~~~yl~~~l~~~~R~~lt~ 181 (1374)
+++++.++.+.+++.++.|+++|||+|+++ |.+.|++.+..+.+++++..++.++..|++++++++||+|||+
T Consensus 21 ~~i~l~l~~v~~~v~~n~w~~~fy~aL~~~~~~~~~~~~~~f~~~l~~f~~~~~~~v~~~v~~~~~~~~l~i~WR~wLT~ 100 (326)
T PRK12369 21 FILLSLWYQVSLNVAINEWYGDFYDLLQKAKIEPNNHTAGDFWASILSFLAIAMPYVLIATVVDYFASHYAFRWREAMTF 100 (326)
T ss_pred HHHHHHHHHHHHhhhhhHHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367788999999999999999999999996 7999999999998888888888999999999999999999999
Q ss_pred HHHHHHhhccccccccccCCCCCChhHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hhhhHH
Q 000647 182 LIHTRYFENMAYYKISHVDGRITHPEQRLASDVPRFCSELSELVQDDLTAVTDGLLYTWRLCSY----------ASPKYV 251 (1374)
Q Consensus 182 ~l~~~yl~~~~~y~~~~~d~~~~npdqRit~Di~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~~----------~~~~l~ 251 (1374)
++.++|+. .++.+|||||||+||++.|++...++..+++.++++.+.|+..|+.. ..|+++
T Consensus 101 ~~l~~wl~---------~~~~iDNPDQRI~EDi~~f~~~tl~l~~~~i~s~~~l~sF~~iLW~lS~~l~~~~~g~ipg~l 171 (326)
T PRK12369 101 SYLKFWRN---------KRDNIEGSSQRIQEDTYRFAKIMESLGLSFLRAIMTLIAFIPILWGLSDGVSLPFLKDIPGSL 171 (326)
T ss_pred HHHHHHhc---------CCCCCCCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeeecCCCcchH
Confidence 99999996 23568999999999999999999999999999999999987666531 356777
Q ss_pred HHH-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 252 FWI-LAYVLGAGTMMRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESIAFYGGENKEESHIQQKFKALTRHMRVVLHD 330 (1374)
Q Consensus 252 ~~~-l~~~~~~~~i~~~~~~~l~~l~~~~q~~e~~~r~~~~~ir~~~E~Ia~~~ge~~e~~~l~~~f~~~~~~~~~~~~~ 330 (1374)
+|+ ++|.++++.+++++|+|+.+++.++|+.|||||+.+.|+|+|+|+ | .|.+.++++|.++.+++++.++.
T Consensus 172 v~~aiiyai~gt~it~~iGr~L~~ln~~qq~~EAdFR~~Lvrvre~ae~---~----~E~~~l~~~f~~v~~n~~~~~~~ 244 (326)
T PRK12369 172 VWIALLISLGGLVISWFVGIKLPGLEYNNQKVEAAFRKELVYAEDDKKN---Y----AKPETLIELFTGLRFNYFRLFLH 244 (326)
T ss_pred HHHHHHHHHHHHHHHHHHcCcCchhhHHHHHHHHHHHHHHHhhccchhh---h----hhHHHHHHHHHHHHHHHHHHHHH
Confidence 776 567777888889999999999999999999999999999999998 3 78889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000647 331 HWWFGMIQDFLLKYLGATVAVILIIEPFFAGNLKPDTSTLGRAKMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYA 410 (1374)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~il~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~ 410 (1374)
..++++++..+. +++..+++++++|.|++|.+ ++|..+.. ...+..+..+++.++.++.++.++.+..
T Consensus 245 ~~~l~~~~~~y~-~~~~i~p~li~aP~y~sg~i-----~lG~l~Q~------~~AF~~v~~als~~v~~y~~la~~~A~~ 312 (326)
T PRK12369 245 YGYFNIWLISFS-QMMVIVPYLIMAPGLFAGVI-----TLGVLMQI------SNAFSQVRSSFSVFIRNWTTITELRSIY 312 (326)
T ss_pred HHhHHHHHHHHH-HHHHHHHHHHHHHHHHhCCc-----chhHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888664 57778888899999998877 56654332 3456677788999999999999999999
Q ss_pred HHHHHHHhh
Q 000647 411 DRIHELMVI 419 (1374)
Q Consensus 411 ~Ri~~~~~~ 419 (1374)
+|+.++.+.
T Consensus 313 ~RL~~f~~~ 321 (326)
T PRK12369 313 KRLKEFEKN 321 (326)
T ss_pred HHHHHHHHH
Confidence 999988654
No 376
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-34 Score=314.16 Aligned_cols=200 Identities=22% Similarity=0.273 Sum_probs=162.6
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEEEec
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 1178 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~~Vp 1178 (1374)
|+++||++.|++ .++++|+||+|++| .++|+||||||||||+++|.|+++|.+|+|.++|.++... ..++++++++|
T Consensus 1 i~~~~~~~~~~~-~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 78 (211)
T cd03264 1 LQLENLTKRYGK-KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLP 78 (211)
T ss_pred CEEEEEEEEECC-EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEec
Confidence 578999998865 46999999999999 9999999999999999999999999999999999988754 23467899999
Q ss_pred CCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|+|.+|.+ |++||+.++.... +. ......+.+.++++.+++.+..+.. ...||
T Consensus 79 q~~~~~~~~tv~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS 132 (211)
T cd03264 79 QEFGVYPNFTVREFLDYIAWLK----------GI------PSKEVKARVDEVLELVNLGDRAKKK----------IGSLS 132 (211)
T ss_pred CCCcccccCCHHHHHHHHHHHh----------CC------CHHHHHHHHHHHHHHCCCHHHHhCc----------hhhCC
Confidence 99999986 9999997532100 00 0000123456778888876543322 35699
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh-
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD- 1336 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~- 1336 (1374)
+|||||++| ||||+++|+++||||||++||.++.+.+.+.+++
T Consensus 133 ~G~~qrv~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~ 176 (211)
T cd03264 133 GGMRRRVGI------------------------------------AQALVGDPSILIVDEPTAGLDPEERIRFRNLLSEL 176 (211)
T ss_pred HHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999888776654
Q ss_pred -cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1337 -MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1337 -~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
.+.|+|+|+|+++.+ .+.|+++.+.+|
T Consensus 177 ~~~~tii~vsH~~~~~~~~~d~i~~l~~g 205 (211)
T cd03264 177 GEDRIVILSTHIVEDVESLCNQVAVLNKG 205 (211)
T ss_pred hCCCEEEEEcCCHHHHHHhCCEEEEEECC
Confidence 368999999999877 578999999654
No 377
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=331.49 Aligned_cols=198 Identities=19% Similarity=0.278 Sum_probs=162.3
Q ss_pred cEEEeeeEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc----CCccEEEeCCCCc------c
Q 000647 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP----LVSGHIAKPGVGS------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~----~~~G~I~~~g~~~------~ 510 (1374)
.|+++|+++.|+. ...+++|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|.+. +
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 5899999999863 3469999999999999999999999999999999999987 5899999998641 1
Q ss_pred c----cccEEEEecCCCC---CcCCHHHHhcCCCCC---Ccc---cCCCCHHHHHHHHHHcCChh---HHhcCCCCcccc
Q 000647 511 L----NKEIFYVPQRPYT---AVGTLRDQLIYPLTS---DQE---VEPLTHGGMVELLKNVDLEY---LLDRYPPEKEIN 574 (1374)
Q Consensus 511 ~----~~~i~~v~Q~p~l---~~~Tv~eni~~~~~~---~~~---~~~~~~~~~~~~l~~~~L~~---~~~~~~~~~~~~ 574 (1374)
+ ++.|+||||+|.. +..|+.+|+..+... ... ......+++.++++.++|.+ ..++.|
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p------ 156 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFP------ 156 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCc------
Confidence 1 2479999999963 236899998653110 000 00112356788999999974 345666
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 575 WGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 575 ~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
.+||||||||++|||||+.+|+++||||||++||+.+...+.+.+++ .|.|+|+||||++.+. .+|++++|++
T Consensus 157 --~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 157 --YELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred --hhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 68999999999999999999999999999999999999999888764 4899999999999985 6999999975
No 378
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=319.06 Aligned_cols=202 Identities=21% Similarity=0.215 Sum_probs=163.1
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCC-c-------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVG-S------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~-~------- 509 (1374)
..|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+ .
T Consensus 5 ~~i~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 5 IILSTKNLNLWYG-EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred ceEEEeeeEEEEC-CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 3689999999985 56799999999999999999999999999999999999763 48999999854 1
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1374)
..++.++|+||+|.++..|++||+.++....... ....++++.++++.+++.+.+.... ......||||||||++
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LS~G~~qrv~ 159 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRL----HDSALSLSGGQQQRLC 159 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHh----hcChhhCCHHHHHHHH
Confidence 2346799999999988889999998763221110 1112345677888888754221100 0113689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 589 lARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||++.+|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 160 laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~ 223 (253)
T PRK14261 160 IARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYL 223 (253)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999999999888764 3689999999999885 7999999976
No 379
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.2e-34 Score=321.28 Aligned_cols=211 Identities=23% Similarity=0.293 Sum_probs=161.8
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc---CCcccEEE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 1176 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~---~~r~~i~~ 1176 (1374)
|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..+.+++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (236)
T cd03219 1 LEVRGLTKRFGG-LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGR 79 (236)
T ss_pred CeeeeeEEEECC-EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEE
Confidence 478999999875 56999999999999999999999999999999999999999999999999887652 23457999
Q ss_pred ecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
|||+|.+|.+ |++||+.++....... ...+. . .........+.+.++++.+++.....+ ....
T Consensus 80 v~q~~~l~~~~tv~~~l~~~~~~~~~~-~~~~~--~---~~~~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~ 143 (236)
T cd03219 80 TFQIPRLFPELTVLENVMVAAQARTGS-GLLLA--R---ARREEREARERAEELLERVGLADLADR----------PAGE 143 (236)
T ss_pred EecccccccCCCHHHHHHHHHhhcccc-ccccc--c---ccccHHHHHHHHHHHHHHcCccchhhC----------Chhh
Confidence 9999999987 9999997653110000 00000 0 000000012235566777666433222 2357
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||||||||++| ||||+++|+++||||||++||.++.+.+.+.++
T Consensus 144 LSgG~~qrv~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~ 187 (236)
T cd03219 144 LSYGQQRRLEI------------------------------------ARALATDPKLLLLDEPAAGLNPEETEELAELIR 187 (236)
T ss_pred CCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999988777654
Q ss_pred h---cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1336 D---MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1336 ~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
+ .|+|+|+|+|+++.+ .+.|+++.+.+|
T Consensus 188 ~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G 219 (236)
T cd03219 188 ELRERGITVLLVEHDMDVVMSLADRVTVLDQG 219 (236)
T ss_pred HHHHCCCEEEEEecCHHHHHHhCCEEEEEeCC
Confidence 3 589999999999876 568888888554
No 380
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9.2e-34 Score=313.41 Aligned_cols=202 Identities=22% Similarity=0.256 Sum_probs=162.3
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccc--c--cCCcccEE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--E--AGSGCGIF 1175 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~--~--~~~r~~i~ 1175 (1374)
|+++||++.|++ +++++++||+|+|||.++|+||||||||||+++|.|+++|.+|+|.++|.++.. . ...+++++
T Consensus 1 l~~~~l~~~~~~-~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (213)
T cd03262 1 IEIKNLHKSFGD-FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVG 79 (213)
T ss_pred CEEEEEEEEECC-eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcce
Confidence 478999999976 579999999999999999999999999999999999999999999999998843 1 23466899
Q ss_pred EecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccccc
Q 000647 1176 YVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1374)
Q Consensus 1176 ~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~ 1254 (1374)
|+||+|.+|. .|++||+.++..... +. .....++.+.++++.+++...+.+. ..
T Consensus 80 ~~~q~~~~~~~~t~~e~l~~~~~~~~---------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~ 134 (213)
T cd03262 80 MVFQQFNLFPHLTVLENITLAPIKVK---------GM------SKAEAEERALELLEKVGLADKADAY----------PA 134 (213)
T ss_pred EEecccccCCCCcHHHHHHhHHHHhc---------CC------CHHHHHHHHHHHHHHcCCHhHhhhC----------cc
Confidence 9999999986 699999976421000 00 0000122355677777775544332 35
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
.||+|||||++| |||++++|+++||||||++||+++.+.+.+.+
T Consensus 135 ~LS~G~~qrv~l------------------------------------a~al~~~p~llllDEP~~~LD~~~~~~l~~~l 178 (213)
T cd03262 135 QLSGGQQQRVAI------------------------------------ARALAMNPKVMLFDEPTSALDPELVGEVLDVM 178 (213)
T ss_pred ccCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH
Confidence 799999999999 99999999999999999999999998877765
Q ss_pred Hh---cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1335 KD---MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1335 ~~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
++ .|+|+|.++|+++.+ ++.++++.+.+|
T Consensus 179 ~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g 211 (213)
T cd03262 179 KDLAEEGMTMVVVTHEMGFAREVADRVIFMDDG 211 (213)
T ss_pred HHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 43 489999999999877 578999999655
No 381
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4.4e-34 Score=319.14 Aligned_cols=205 Identities=23% Similarity=0.273 Sum_probs=163.9
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCC-----CCCCCeEecCCCcccccc----CC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLW-----PVVSGSLTKPSQHIDEEA----GS 1170 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~-----~~~~G~I~idg~dI~~~~----~~ 1170 (1374)
|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|++ +|.+|+|.++|.++...+ ..
T Consensus 1 i~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (227)
T cd03260 1 IELRDLNVYYGD-KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLEL 79 (227)
T ss_pred CEEEEEEEEcCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHH
Confidence 578999999965 46999999999999999999999999999999999999 999999999999886542 34
Q ss_pred cccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1171 GCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1171 r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
+++++|+||+|.+|..|++||+.++.... +. . .....++.+.++++.+++.+...+.++
T Consensus 80 ~~~i~~~~q~~~~~~~tv~e~l~~~~~~~----------~~----~-~~~~~~~~~~~~l~~~~l~~~~~~~~~------ 138 (227)
T cd03260 80 RRRVGMVFQKPNPFPGSIYDNVAYGLRLH----------GI----K-LKEELDERVEEALRKAALWDEVKDRLH------ 138 (227)
T ss_pred HhhEEEEecCchhccccHHHHHHhHHHhc----------CC----C-cHHHHHHHHHHHHHHcCCChHHhccCC------
Confidence 56899999999999889999997653100 00 0 000012345677888777654333210
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
...||||||||++| ||||+++|+++||||||++||.++.+.+
T Consensus 139 --~~~LSgG~~qrv~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l 180 (227)
T cd03260 139 --ALGLSGGQQQRLCL------------------------------------ARALANEPEVLLLDEPTSALDPISTAKI 180 (227)
T ss_pred --cccCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCccCCHHHHHHH
Confidence 35799999999999 9999999999999999999999999888
Q ss_pred HHHHHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1331 YRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1331 ~~~~~~--~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.+.+++ ..+|+|+|+|+++.+ .+.|+++.+.+|+
T Consensus 181 ~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 217 (227)
T cd03260 181 EELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGR 217 (227)
T ss_pred HHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCE
Confidence 776543 138999999999765 5789999996654
No 382
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=321.79 Aligned_cols=198 Identities=21% Similarity=0.258 Sum_probs=163.6
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCC-------cc
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVG-------SD 510 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~-------~~ 510 (1374)
..++++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+ ..
T Consensus 20 ~~l~i~nl~~~~~-~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 20 PAMAAVNLTLGFA-GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred cEEEEeeEEEEEC-CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 4789999999996 57899999999999999999999999999999999999986 69999999853 12
Q ss_pred ccccEEEEecCCCCCcCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCChhHH----hcCCCCccccCCCCCChhHHH
Q 000647 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLL----DRYPPEKEINWGDELSLGEQQ 585 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~L~~~~----~~~~~~~~~~~g~~LSgGqkQ 585 (1374)
+++.++|+||+|.++..|+++|+.++...... ......+.+.++++.+++.+.. ++. ..+|||||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--------~~~LSgGq~q 170 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDS--------PFRLSGGQQQ 170 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCC--------cccCCHHHHH
Confidence 45689999999998889999999875321110 0001112345678888886432 222 3689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhc--CCEEEEEccChhhHh-hccEEEEecC
Q 000647 586 RLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 586 RlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~--~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|++|||||+++|+++||||||++||+.+.+.+++.+++. ++|+|+|||+++.+. .+|++++|++
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~ 237 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFD 237 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999887652 689999999999865 7999999986
No 383
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.3e-33 Score=315.65 Aligned_cols=181 Identities=22% Similarity=0.292 Sum_probs=151.4
Q ss_pred eeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-ccccccEEEEecCCCCCc-CCHHHHhcCCCC
Q 000647 461 VENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SDLNKEIFYVPQRPYTAV-GTLRDQLIYPLT 538 (1374)
Q Consensus 461 l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~~~~~~i~~v~Q~p~l~~-~Tv~eni~~~~~ 538 (1374)
++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ .......+|+||+|.++. .|++||+.++..
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~l~~~~tv~e~l~~~~~ 80 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPDRMVVFQNYSLLPWLTVRENIALAVD 80 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhheEEecCcccCCCCCHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999864 122234689999998876 699999987521
Q ss_pred C--CcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHH
Q 000647 539 S--DQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEER 616 (1374)
Q Consensus 539 ~--~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~ 616 (1374)
. .........+++.++++.+++.+..++.+ ..||||||||++|||||+++|+++||||||++||+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~ 152 (230)
T TIGR01184 81 RVLPDLSKSERRAIVEEHIALVGLTEAADKRP--------GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGN 152 (230)
T ss_pred hcccCCCHHHHHHHHHHHHHHcCCHHHHcCCh--------hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHH
Confidence 1 00000112335678899999988777765 6899999999999999999999999999999999999999
Q ss_pred HHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 617 FCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 617 i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+.+.+++ .|+|+|+|||+++.+ ..+|+++++++
T Consensus 153 l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~ 190 (230)
T TIGR01184 153 LQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTN 190 (230)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeC
Confidence 9887754 388999999999986 47999999985
No 384
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.2e-33 Score=317.22 Aligned_cols=185 Identities=25% Similarity=0.311 Sum_probs=152.8
Q ss_pred CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----ccccccEEEEe-cCCCCC-cCCH
Q 000647 457 GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----SDLNKEIFYVP-QRPYTA-VGTL 529 (1374)
Q Consensus 457 ~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~~~~~~i~~v~-Q~p~l~-~~Tv 529 (1374)
.+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ...+++++|+| |++.++ ..|+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCCCCcH
Confidence 4679999999999999999999999999999999999999999999998853 12456899998 556665 4699
Q ss_pred HHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCC
Q 000647 530 RDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAV 609 (1374)
Q Consensus 530 ~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaL 609 (1374)
+||+.+.............+++.++++.+++.+..++.+ ..||||||||++||||++++|+++||||||++|
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~--------~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 184 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELLDTPV--------RQLSLGQRMRAEIAAALLHEPEILFLDEPTIGL 184 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 999976422111001112234667888899987776654 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 610 TTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 610 D~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|+.+.+.+.+.+++ .++|+|++||+++.+ ..+|+++++++
T Consensus 185 D~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~ 229 (236)
T cd03267 185 DVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDK 229 (236)
T ss_pred CHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 99999999988764 278999999999987 46999999975
No 385
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.4e-33 Score=305.56 Aligned_cols=186 Identities=20% Similarity=0.252 Sum_probs=157.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-cc-cccEEEEecCC
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-DL-NKEIFYVPQRP 522 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-~~-~~~i~~v~Q~p 522 (1374)
++++|+++.|++ +.+++ +||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .. ++.++|++|++
T Consensus 2 l~~~~l~~~~~~-~~l~~-vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ 79 (195)
T PRK13541 2 LSLHQLQFNIEQ-KNLFD-LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQPSSGNIYYKNCNINNIAKPYCTYIGHNL 79 (195)
T ss_pred eEEEEeeEEECC-cEEEE-EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCcccChhhhhhEEeccCCc
Confidence 789999999853 55555 9999999999999999999999999999999999999999998651 11 34699999987
Q ss_pred CC-CcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000647 523 YT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAI 601 (1374)
Q Consensus 523 ~l-~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~ill 601 (1374)
.+ +..|++||+.++.... ..++++.++++.+++.+..++.+ .+||||||||++||||++++|+++|
T Consensus 80 ~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~~rl~la~al~~~p~~ll 146 (195)
T PRK13541 80 GLKLEMTVFENLKFWSEIY-----NSAETLYAAIHYFKLHDLLDEKC--------YSLSSGMQKIVAIARLIACQSDLWL 146 (195)
T ss_pred CCCccCCHHHHHHHHHHhc-----ccHHHHHHHHHHcCCHhhhccCh--------hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 55 5679999998753221 12456778899999988777654 6899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHH---hcCCEEEEEccChhhHhhccEEE
Q 000647 602 LDECTSAVTTDMEERFCAKVR---AMGTSCITISHRPALVAFHDVVL 645 (1374)
Q Consensus 602 LDEptsaLD~~~~~~i~~~l~---~~~~TiI~vtH~~~~~~~~d~il 645 (1374)
|||||++||+.+.+.+.+.++ +.+.|+|++||+++.++.+|-+.
T Consensus 147 lDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~ 193 (195)
T PRK13541 147 LDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLESSIKSAQILQ 193 (195)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCccccchhheec
Confidence 999999999999999988775 35899999999999998887653
No 386
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=317.83 Aligned_cols=199 Identities=21% Similarity=0.248 Sum_probs=164.7
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc-------
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS------- 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~------- 509 (1374)
.+.|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+.
T Consensus 14 ~~~l~~~~l~~~~~-~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~ 92 (265)
T PRK14252 14 QQKSEVNKLNFYYG-GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEV 92 (265)
T ss_pred CceEEEEEEEEEEC-CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccccc
Confidence 46799999999986 45799999999999999999999999999999999999875 799999987531
Q ss_pred ---cccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChh----HHhcCCCCccccCCCCCCh
Q 000647 510 ---DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSL 581 (1374)
Q Consensus 510 ---~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~----~~~~~~~~~~~~~g~~LSg 581 (1374)
.+++.++|+||+|.++.+|++||+.++....... ....++++.++++.+++.+ ..++. ...|||
T Consensus 93 ~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--------~~~LS~ 164 (265)
T PRK14252 93 DPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDL--------AFNLSG 164 (265)
T ss_pred CHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCC--------cccCCH
Confidence 2356799999999998889999998753211100 0112356677888888743 23332 268999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 582 GEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 582 GqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||||++||||++.+|+++||||||++||+.+.+.+.+.+++ .+.|+|+|||+++.+. .+|+++++++
T Consensus 165 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~ 235 (265)
T PRK14252 165 GQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYM 235 (265)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999888764 3689999999999884 7999999975
No 387
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=319.40 Aligned_cols=202 Identities=20% Similarity=0.239 Sum_probs=163.9
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCC-----ccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~-----~G~I~~~g~~~-------- 509 (1374)
+.|+++|+++.|+ +..+++|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.+.
T Consensus 6 ~~l~~~nl~~~~~-~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~ 84 (261)
T PRK14258 6 PAIKVNNLSFYYD-TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLN 84 (261)
T ss_pred ceEEEeeEEEEeC-CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchH
Confidence 4699999999985 457999999999999999999999999999999999999985 89999988541
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCcc-cCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQE-VEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~-~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1374)
.+++.++|+||++.++..|++||+.++...... .....++++.++++.+++.+.++... + ....+||||||||++
T Consensus 85 ~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~---~~~~~LSgGq~qrv~ 160 (261)
T PRK14258 85 RLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKI-H---KSALDLSGGQQQRLC 160 (261)
T ss_pred HhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHh-c---CCcccCCHHHHHHHH
Confidence 235679999999988889999999864211100 00011345677888998864332110 0 012689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 589 lARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||+++++|+++||||||++||+.+.+.+++.+++ .+.|+|+|||+++.+. .+|++++|++
T Consensus 161 laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~ 226 (261)
T PRK14258 161 IARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKG 226 (261)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEcc
Confidence 99999999999999999999999999999887764 4899999999999875 7999999986
No 388
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=3.1e-33 Score=317.49 Aligned_cols=197 Identities=22% Similarity=0.321 Sum_probs=160.9
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-----c-c-------
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-----S-D------- 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-----~-~------- 510 (1374)
.++++|+++.|+ +..+++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+ . .
T Consensus 3 ~l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (253)
T TIGR02323 3 LLQVSGLSKSYG-GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAERR 81 (253)
T ss_pred eEEEeeeEEEeC-CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHHH
Confidence 589999999996 4578999999999999999999999999999999999999999999998753 1 0
Q ss_pred --ccccEEEEecCCCC---CcCCHHHHhcCCCC-CCcccCCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhH
Q 000647 511 --LNKEIFYVPQRPYT---AVGTLRDQLIYPLT-SDQEVEPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGE 583 (1374)
Q Consensus 511 --~~~~i~~v~Q~p~l---~~~Tv~eni~~~~~-~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGq 583 (1374)
.++.++|++|+|.. +..|+.+|+.+... .........++++.++++.+++. +..++.+ ..|||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~--------~~LSgG~ 153 (253)
T TIGR02323 82 RLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLP--------RAFSGGM 153 (253)
T ss_pred HhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCc--------hhcCHHH
Confidence 12469999999853 23588888854210 00000011235677889999996 4566544 6899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||++||||++++|+++||||||++||+.+.+.+++.+++ .|.|+|+|||+++.+. .+|+++++++
T Consensus 154 ~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~ 224 (253)
T TIGR02323 154 QQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQ 224 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 9999999999999999999999999999999999887753 3899999999999886 6999999975
No 389
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-33 Score=311.74 Aligned_cols=199 Identities=21% Similarity=0.237 Sum_probs=162.3
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++|+++.|++. . .|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++......+++++|+||
T Consensus 1 i~~~~l~~~~~~~-~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 77 (211)
T cd03298 1 VRLDKIRFSYGEQ-P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQ 77 (211)
T ss_pred CEEEeEEEEeCCE-e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEec
Confidence 5789999988753 2 399999999999999999999999999999999999999999999988765444567999999
Q ss_pred CCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
+|.+|.+ |++||+.++...... .....++++.++++.+++.+...+. ...||+
T Consensus 78 ~~~~~~~~tv~enl~~~~~~~~~----------------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 131 (211)
T cd03298 78 ENNLFAHLTVEQNVGLGLSPGLK----------------LTAEDRQAIEVALARVGLAGLEKRL----------PGELSG 131 (211)
T ss_pred ccccCCCCcHHHHHhcccccccC----------------ccHHHHHHHHHHHHHcCCHHHHhCC----------cccCCH
Confidence 9999986 999999865421000 0001134567788888876554433 356999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| |||++++|+++||||||++||.++.+.+.+.+++
T Consensus 132 G~~qrv~i------------------------------------a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~ 175 (211)
T cd03298 132 GERQRVAL------------------------------------ARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLH 175 (211)
T ss_pred HHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999887775542
Q ss_pred --cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1337 --MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
.++|+|.|+|+++.+ .+.|+++.+.+|
T Consensus 176 ~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 205 (211)
T cd03298 176 AETKMTVLMVTHQPEDAKRLAQRVVFLDNG 205 (211)
T ss_pred HhcCCEEEEEecCHHHHHhhhCEEEEEECC
Confidence 489999999999766 568999999654
No 390
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.6e-33 Score=329.53 Aligned_cols=199 Identities=27% Similarity=0.358 Sum_probs=161.6
Q ss_pred CcEEEeeeEEEcCC--C-CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCC---ccEEEeCCCCc------c
Q 000647 443 NYIEFSGVKVVTPT--G-NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV---SGHIAKPGVGS------D 510 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~--~-~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~---~G~I~~~g~~~------~ 510 (1374)
..++++|+++.|+. + ..+++|+||+|++||+++|+|+||||||||+++|+|+++|. +|+|.++|.+- +
T Consensus 11 ~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~ 90 (330)
T PRK09473 11 ALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKE 90 (330)
T ss_pred ceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHH
Confidence 46999999998863 2 46999999999999999999999999999999999999996 99999998641 1
Q ss_pred ---cc-ccEEEEecCCC--CC-cCCHHHHhcCCCCCCc-ccCCCCHHHHHHHHHHcCChh---HHhcCCCCccccCCCCC
Q 000647 511 ---LN-KEIFYVPQRPY--TA-VGTLRDQLIYPLTSDQ-EVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDEL 579 (1374)
Q Consensus 511 ---~~-~~i~~v~Q~p~--l~-~~Tv~eni~~~~~~~~-~~~~~~~~~~~~~l~~~~L~~---~~~~~~~~~~~~~g~~L 579 (1374)
++ ++|+||||+|. +. ..|+.+|+..+..... .......+++.++++.++|.+ ..+++| .+|
T Consensus 91 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p--------~~L 162 (330)
T PRK09473 91 LNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYP--------HEF 162 (330)
T ss_pred HHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCc--------ccC
Confidence 12 47999999983 43 3588888865422110 001112345678899999864 234455 689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 580 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 580 SgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||||||++|||||+.+|+++|+||||++||..+...+++.+++ .|.|+|+||||++.+. .+|++++|.+
T Consensus 163 SgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~ 237 (330)
T PRK09473 163 SGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYA 237 (330)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999887653 3899999999999985 7999999975
No 391
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.8e-33 Score=316.71 Aligned_cols=194 Identities=24% Similarity=0.317 Sum_probs=160.9
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC----CccEEEeCCCCc---c-ccccE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL----VSGHIAKPGVGS---D-LNKEI 515 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~----~~G~I~~~g~~~---~-~~~~i 515 (1374)
.++++|+++.| ++++++|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|.+. + .++.+
T Consensus 4 ~l~~~~l~~~~--~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i 81 (254)
T PRK10418 4 QIELRNIALQA--AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKI 81 (254)
T ss_pred EEEEeCeEEEe--ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceE
Confidence 58999999998 46799999999999999999999999999999999999999 999999998641 1 23579
Q ss_pred EEEecCCC-CC--cCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChh---HHhcCCCCccccCCCCCChhHHHHHHH
Q 000647 516 FYVPQRPY-TA--VGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 516 ~~v~Q~p~-l~--~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~---~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
+|+||+|. .+ ..|+.+|+.+...... ....++++.++++.+++.+ ..++.+ .+||||||||++|
T Consensus 82 ~~v~q~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~LS~Gq~qrv~l 151 (254)
T PRK10418 82 ATIMQNPRSAFNPLHTMHTHARETCLALG--KPADDATLTAALEAVGLENAARVLKLYP--------FEMSGGMLQRMMI 151 (254)
T ss_pred EEEecCCccccCccccHHHHHHHHHHHcC--CChHHHHHHHHHHHcCCCChhhhhhcCC--------cccCHHHHHHHHH
Confidence 99999984 23 2588888755311100 0123456888999999976 345443 6899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||++++|+++||||||++||+.+.+.+++.+++ .|.|+|++||+++.+. .+|+++++++
T Consensus 152 aral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~ 216 (254)
T PRK10418 152 ALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSH 216 (254)
T ss_pred HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999887754 3789999999999874 7999999975
No 392
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-33 Score=311.42 Aligned_cols=199 Identities=22% Similarity=0.294 Sum_probs=160.7
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++|+++.|++ +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.. ..+.+++|+||
T Consensus 1 l~~~~l~~~~~~-~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFGR-VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI--AARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEECC-EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH--HHHccEEEecc
Confidence 478999998864 579999999999999999999999999999999999999999999999998764 34567999999
Q ss_pred CCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
+|.+|.+ |++||+.++... .+. .....++++.++++.+++....... ...|||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 131 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQL----------KGL------KKEEARRRIDEWLERLELSEYANKR----------VEELSK 131 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHH----------cCC------ChHHHHHHHHHHHHHcCChHHHhCc----------HhhCCH
Confidence 9999875 999999753110 000 0000123456677777765443221 356999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| |||++++|+++||||||++||.++.+.+.+.+++
T Consensus 132 G~~qrl~l------------------------------------a~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~ 175 (210)
T cd03269 132 GNQQKVQF------------------------------------IAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELA 175 (210)
T ss_pred HHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999887776543
Q ss_pred -cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1337 -MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1337 -~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
.++|+|+|+|++..+ ++.|+++.+.+|
T Consensus 176 ~~~~tii~~sH~~~~~~~~~d~i~~l~~g 204 (210)
T cd03269 176 RAGKTVILSTHQMELVEELCDRVLLLNKG 204 (210)
T ss_pred HCCCEEEEECCCHHHHHHhhhEEEEEeCC
Confidence 489999999999765 578999999654
No 393
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.1e-33 Score=333.48 Aligned_cols=203 Identities=20% Similarity=0.245 Sum_probs=168.8
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEec
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~Vp 1178 (1374)
.|+++||++.|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++.+....+++++|||
T Consensus 4 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~ 82 (353)
T TIGR03265 4 YLSIDNIRKRFGA-FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVF 82 (353)
T ss_pred EEEEEEEEEEeCC-eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 4899999999975 569999999999999999999999999999999999999999999999999876643456799999
Q ss_pred CCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|+|.+|+ .|++|||.|+..... . .....++.+.++++.++|.++.++. ...||
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~~----------~------~~~~~~~~~~~~l~~l~L~~~~~~~----------~~~LS 136 (353)
T TIGR03265 83 QSYALFPNLTVADNIAYGLKNRG----------M------GRAEVAERVAELLDLVGLPGSERKY----------PGQLS 136 (353)
T ss_pred CCcccCCCCcHHHHHHHHHHhcC----------C------CHHHHHHHHHHHHHHcCCCchhhCC----------hhhCC
Confidence 9999996 599999998743100 0 0000133467788888887666554 35799
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH--
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK-- 1335 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~-- 1335 (1374)
||||||+|| ||||+++|+++|||||||+||..+.+.+.+.++
T Consensus 137 gGq~QRvaL------------------------------------ARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l 180 (353)
T TIGR03265 137 GGQQQRVAL------------------------------------ARALATSPGLLLLDEPLSALDARVREHLRTEIRQL 180 (353)
T ss_pred HHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHH
Confidence 999999999 999999999999999999999999887766543
Q ss_pred --hcCceEEEecCCCCc-hhhccceEEEEcCC
Q 000647 1336 --DMGITFVTSSQRPAL-IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1336 --~~~~TvI~IaHRl~~-i~~~~~~l~l~~g~ 1364 (1374)
+.|+|+|.|+|+++. ....|+++.|.+|+
T Consensus 181 ~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~ 212 (353)
T TIGR03265 181 QRRLGVTTIMVTHDQEEALSMADRIVVMNHGV 212 (353)
T ss_pred HHhcCCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 358999999999964 67899999996653
No 394
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=325.68 Aligned_cols=201 Identities=19% Similarity=0.303 Sum_probs=165.2
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccc--c--cCCcccE
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--E--AGSGCGI 1174 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~--~--~~~r~~i 1174 (1374)
-|+++||++.|++++.+++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.. . ...|+++
T Consensus 5 ~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~i 84 (283)
T PRK13636 5 ILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRESV 84 (283)
T ss_pred eEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhhE
Confidence 48999999999766779999999999999999999999999999999999999999999999998842 1 2356789
Q ss_pred EEecCCC--CCCCcchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccc
Q 000647 1175 FYVPQRP--YTCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1374)
Q Consensus 1175 ~~VpQ~P--~Lf~GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~ 1249 (1374)
+||||+| .+|+.|++||+.++... +.. ...+.+.++++.++|..+.++
T Consensus 85 g~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~-------------------~~~~~~~~~l~~~gL~~~~~~-------- 137 (283)
T PRK13636 85 GMVFQDPDNQLFSASVYQDVSFGAVNLKLPED-------------------EVRKRVDNALKRTGIEHLKDK-------- 137 (283)
T ss_pred EEEecCcchhhccccHHHHHHhHHHHcCCCHH-------------------HHHHHHHHHHHHCCChhhhhC--------
Confidence 9999999 67889999999764210 000 011235567788877544332
Q ss_pred cccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHH
Q 000647 1250 LNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQ 1329 (1374)
Q Consensus 1250 ~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~ 1329 (1374)
....||+|||||++| ||||+++|++|||||||++||++..+.
T Consensus 138 --~~~~LS~G~~qrl~l------------------------------------araL~~~p~lLilDEPt~gLD~~~~~~ 179 (283)
T PRK13636 138 --PTHCLSFGQKKRVAI------------------------------------AGVLVMEPKVLVLDEPTAGLDPMGVSE 179 (283)
T ss_pred --CcccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 246799999999999 999999999999999999999999987
Q ss_pred HHHHHH----hcCceEEEecCCCCchh-hccceEEEEcCC
Q 000647 1330 LYRLAK----DMGITFVTSSQRPALIP-FHSLELRLIDGE 1364 (1374)
Q Consensus 1330 l~~~~~----~~~~TvI~IaHRl~~i~-~~~~~l~l~~g~ 1364 (1374)
+.++++ ..|+|+|.++|+++.+. +.|+++.|.+|+
T Consensus 180 l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~ 219 (283)
T PRK13636 180 IMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGR 219 (283)
T ss_pred HHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 766543 24899999999998775 899999996654
No 395
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-33 Score=316.39 Aligned_cols=200 Identities=21% Similarity=0.188 Sum_probs=165.3
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC-----CccEEEeCCCCc--------
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL-----VSGHIAKPGVGS-------- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~-----~~G~I~~~g~~~-------- 509 (1374)
..+.++++++.|. +.++++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.+.
T Consensus 7 ~~~~~~~~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 7 IVMDCKLDKIFYG-NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred ceEEEEeEEEEeC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 3588899999884 56799999999999999999999999999999999999986 799999998641
Q ss_pred cccccEEEEecCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHH
Q 000647 510 DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
.+++.++|+||+|+++..|+.||+.++...... .....+++.++++.+++.+.+..... ....+||||||||++|
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~i~~~~~----~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRY-KGDLGDRVKHALQGAALWDEVKDKLK----VSGLSLSGGQQQRLCI 160 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCc-hHHHHHHHHHHHHHcCCchhhhhhhh----CCcccCCHHHHHHHHH
Confidence 235679999999999889999999876432110 11123567888999998654332110 1236899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEec
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLD 648 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~ 648 (1374)
|||++++|+++||||||++||+.+...+.+.+++ .+.|+|++||+++.+ ..+|++++++
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~ 222 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFS 222 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999998875 378999999999976 5799999996
No 396
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=317.33 Aligned_cols=199 Identities=29% Similarity=0.357 Sum_probs=163.6
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCC------CC------c
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPG------VG------S 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g------~~------~ 509 (1374)
.+.+.++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .+ .
T Consensus 8 ~~~i~~~~~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 8 EDVFNISRLYLYIN-DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred hhheeeeeEEEecC-CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 45799999999985 56799999999999999999999999999999999999999998777665 22 1
Q ss_pred cccccEEEEecCCCCCcC-CHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChh----HHhcCCCCccccCCCCCChhH
Q 000647 510 DLNKEIFYVPQRPYTAVG-TLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEY----LLDRYPPEKEINWGDELSLGE 583 (1374)
Q Consensus 510 ~~~~~i~~v~Q~p~l~~~-Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~----~~~~~~~~~~~~~g~~LSgGq 583 (1374)
.+++.++|+||+|.++.+ |++||+.++....... +.....++.++++.+++++ ..++.+ ..|||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~LS~G~ 158 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPA--------SQLSGGQ 158 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCc--------ccCCHHH
Confidence 235689999999988875 9999998763211100 0011234677888888864 333333 5799999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|||++||||++.+|+++||||||++||..+++.+.+.+.+ .+.|+|++||+++.+ ..+|+++++++
T Consensus 159 ~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~ 227 (257)
T PRK14246 159 QQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYN 227 (257)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999888765 368999999999988 57999999975
No 397
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.6e-33 Score=316.47 Aligned_cols=202 Identities=18% Similarity=0.276 Sum_probs=161.9
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-CCcccEEEec
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-GSGCGIFYVP 1178 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-~~r~~i~~Vp 1178 (1374)
|+++||++.|++ +.+|+|+||+|+|||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..+++++|+|
T Consensus 2 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 2 LEVAGLSFAYGA-RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred EEEEeeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 689999999875 57999999999999999999999999999999999999999999999999887552 2335799999
Q ss_pred CCCCC-CCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~L-f~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|+|.+ +..|+++|+.++..... . ......+++.++++.+++.+.... ....||
T Consensus 81 q~~~~~~~~t~~~~l~~~~~~~~----------~------~~~~~~~~~~~~l~~~gl~~~~~~----------~~~~LS 134 (236)
T TIGR03864 81 QQPTLDLDLSVRQNLRYHAALHG----------L------SRAEARERIAALLARLGLAERADD----------KVRELN 134 (236)
T ss_pred CCCCCcccCcHHHHHHHHHHhcC----------C------CHHHHHHHHHHHHHHcCChhhhcC----------ChhhCC
Confidence 99988 56799999975421000 0 000012235566777776443222 235799
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh-
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD- 1336 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~- 1336 (1374)
||||||++| |||++++|+++||||||++||.++.+.+.+.+++
T Consensus 135 ~G~~qrl~l------------------------------------aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~ 178 (236)
T TIGR03864 135 GGHRRRVEI------------------------------------ARALLHRPALLLLDEPTVGLDPASRAAIVAHVRAL 178 (236)
T ss_pred HHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999887765542
Q ss_pred ---cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1337 ---MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1337 ---~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
.|+|+|+|+|+++.+...|+++.|.+|+
T Consensus 179 ~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~ 209 (236)
T TIGR03864 179 CRDQGLSVLWATHLVDEIEADDRLVVLHRGR 209 (236)
T ss_pred HHhCCCEEEEEecChhhHhhCCEEEEEeCCe
Confidence 4899999999998888889999996543
No 398
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-33 Score=294.60 Aligned_cols=196 Identities=22% Similarity=0.320 Sum_probs=161.2
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-c------cccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-S------DLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~------~~~~~i~ 516 (1374)
.++++|++..|. ...+|+++||++++||+++|+||||+|||||+|+|+|+.++.+|+|.++|.+ . -.+..|+
T Consensus 3 mL~v~~l~~~YG-~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~ 81 (237)
T COG0410 3 MLEVENLSAGYG-KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIA 81 (237)
T ss_pred ceeEEeEeeccc-ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeE
Confidence 689999999884 5789999999999999999999999999999999999999999999999976 1 2356799
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcC-ChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVD-LEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~-L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
||||.-.+|. .||+||+..+...... +......++++.+.+- |.+..++ .+.+|||||||-+||||||+
T Consensus 82 ~VPegR~iF~~LTVeENL~~g~~~~~~-~~~~~~~~e~v~~lFP~Lker~~~--------~aG~LSGGEQQMLAiaRALm 152 (237)
T COG0410 82 YVPEGRRIFPRLTVEENLLLGAYARRD-KEAQERDLEEVYELFPRLKERRNQ--------RAGTLSGGEQQMLAIARALM 152 (237)
T ss_pred eCcccccchhhCcHHHHHhhhhhcccc-cccccccHHHHHHHChhHHHHhcC--------cccCCChHHHHHHHHHHHHh
Confidence 9999988876 6999999987543221 1111122455555543 3333333 25789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
.+|++|+|||||.||-|...++|++.+++ .|.||++|.++.... +.+|+.++|++
T Consensus 153 ~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~ 212 (237)
T COG0410 153 SRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLEN 212 (237)
T ss_pred cCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeC
Confidence 99999999999999999999999887754 377999999998876 58999999986
No 399
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-34 Score=326.52 Aligned_cols=201 Identities=19% Similarity=0.247 Sum_probs=164.0
Q ss_pred EEEeeeEEeCCCc----ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc------cC
Q 000647 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------AG 1169 (1374)
Q Consensus 1100 I~f~~V~~~yp~~----~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~------~~ 1169 (1374)
|+++||++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.++... ..
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 7899999999742 4799999999999999999999999999999999999999999999999988643 23
Q ss_pred CcccEEEecCCC--CCCCcchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCc-hhhhhhc
Q 000647 1170 SGCGIFYVPQRP--YTCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREE 1243 (1374)
Q Consensus 1170 ~r~~i~~VpQ~P--~Lf~GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~-~~v~~~~ 1243 (1374)
.|++|+||||+| .+|..|++|||.++... +.. ..++.+.++++.++|. +..+.
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~-------------------~~~~~~~~~l~~~gL~~~~~~~-- 141 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLD-------------------EVKNYAHRLLMDLGFSRDVMSQ-- 141 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHH-------------------HHHHHHHHHHHHcCCChhhhhC--
Confidence 567899999998 68889999999865210 000 0122345667766663 22221
Q ss_pred cCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCC
Q 000647 1244 VGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATS 1323 (1374)
Q Consensus 1244 ~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD 1323 (1374)
....||||||||++| ||||+.+|+++||||||++||
T Consensus 142 --------~~~~LSgGq~qrv~l------------------------------------araL~~~p~illlDEPt~~LD 177 (286)
T PRK13646 142 --------SPFQMSGGQMRKIAI------------------------------------VSILAMNPDIIVLDEPTAGLD 177 (286)
T ss_pred --------CcccCCHHHHHHHHH------------------------------------HHHHHhCCCEEEEECCcccCC
Confidence 246799999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCCC
Q 000647 1324 VDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGEG 1365 (1374)
Q Consensus 1324 ~~~e~~l~~~~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~g 1365 (1374)
+++.+.+.+++++ .|+|+|+|+|+++.+ ++.|+++.|.+|+-
T Consensus 178 ~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i 224 (286)
T PRK13646 178 PQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSI 224 (286)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEE
Confidence 9999888776543 489999999999876 67899999976653
No 400
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=322.52 Aligned_cols=201 Identities=22% Similarity=0.325 Sum_probs=166.5
Q ss_pred CEEEeeeEEeCCC-cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEE
Q 000647 1099 SISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIF 1175 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~-~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~ 1175 (1374)
.|+++|+++.|++ .+++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ..+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 5899999999974 57899999999999999999999999999999999999999999999999998754 24567899
Q ss_pred EecCCC--CCCCcchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1176 YVPQRP--YTCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1176 ~VpQ~P--~Lf~GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
|+||+| .++..|++|||.++... +.++ ..+.+.++++.++|.+.+.+.
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~-------------------~~~~~~~~l~~~~l~~~~~~~-------- 139 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKK-------------------MKDIIDDLAKKVGMEDYLDKE-------- 139 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHH-------------------HHHHHHHHHHHcCCHHHhhCC--------
Confidence 999999 46678999999764210 0000 112355677777776554443
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
...||+|||||++| ||||+++|+++||||||++||..+.+.+
T Consensus 140 --~~~LS~G~~qrl~l------------------------------------aral~~~p~lllLDEP~~gLD~~~~~~l 181 (271)
T PRK13632 140 --PQNLSGGQKQRVAI------------------------------------ASVLALNPEIIIFDESTSMLDPKGKREI 181 (271)
T ss_pred --cccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCCHHHHHHH
Confidence 35799999999999 9999999999999999999999999887
Q ss_pred HHHHHh---c-CceEEEecCCCCchhhccceEEEEcCC
Q 000647 1331 YRLAKD---M-GITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1331 ~~~~~~---~-~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
.+++++ . +.|+|+++|+++.+...++++.|.+|+
T Consensus 182 ~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~ 219 (271)
T PRK13632 182 KKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGK 219 (271)
T ss_pred HHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCE
Confidence 776543 2 589999999998888899999996654
No 401
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4e-31 Score=333.59 Aligned_cols=189 Identities=21% Similarity=0.323 Sum_probs=148.4
Q ss_pred CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC---CccEEEeCCCC-cc--ccccEEEEecCCCCC-cCCHH
Q 000647 458 NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL---VSGHIAKPGVG-SD--LNKEIFYVPQRPYTA-VGTLR 530 (1374)
Q Consensus 458 ~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~---~~G~I~~~g~~-~~--~~~~i~~v~Q~p~l~-~~Tv~ 530 (1374)
..+++|++.-++||+.+.+.||.|||||||+++|+|-.+- ..|+|..||.+ ++ -++.++|++|+...+ ..|||
T Consensus 128 ~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVr 207 (1391)
T KOG0065|consen 128 IQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVR 207 (1391)
T ss_pred ceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEe
Confidence 4699999999999999999999999999999999998753 35799999976 11 257899999987654 57999
Q ss_pred HHhcCCCCCCcc---cCCCCHHH-----HHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000647 531 DQLIYPLTSDQE---VEPLTHGG-----MVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAIL 602 (1374)
Q Consensus 531 eni~~~~~~~~~---~~~~~~~~-----~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illL 602 (1374)
|-+-|....... ..+.++.+ .+.+++.+||++-.+....+ +.....|||||.||++|-+++.+|+++++
T Consensus 208 eTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGn---d~~RGvSGGerKRvsi~E~~v~~~~~~~~ 284 (1391)
T KOG0065|consen 208 ETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGN---DMVRGVSGGERKRVSIGEMLVGPASILFW 284 (1391)
T ss_pred ehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecc---cccccccCcccceeeeeeeeecCcceeee
Confidence 999875332211 11122222 33678889998766654311 12356999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChh--hHhhccEEEEecC
Q 000647 603 DECTSAVTTDMEERFCAKVRA----MGTSCITISHRPA--LVAFHDVVLSLDG 649 (1374)
Q Consensus 603 DEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~--~~~~~d~il~l~~ 649 (1374)
||+|.|||..+.-++.+.+++ .+.|.++.-|+++ .....|+|++|.+
T Consensus 285 De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e 337 (1391)
T KOG0065|consen 285 DEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE 337 (1391)
T ss_pred ecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec
Confidence 999999999999999988875 3778888888754 4567899999975
No 402
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.8e-33 Score=331.60 Aligned_cols=207 Identities=22% Similarity=0.308 Sum_probs=168.0
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEec
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~Vp 1178 (1374)
.|+++||++.|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.++.+....+++|+|||
T Consensus 2 ~L~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~ 80 (353)
T PRK10851 2 SIEIANIKKSFGR-TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVF 80 (353)
T ss_pred EEEEEEEEEEeCC-eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEe
Confidence 3789999999975 569999999999999999999999999999999999999999999999999877644456799999
Q ss_pred CCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|+|.+|+. |++||+.|+...... ... ......++.+.++++.++|.++.++. ...||
T Consensus 81 Q~~~l~p~~tv~eni~~~~~~~~~-------~~~-----~~~~~~~~~~~~~l~~~~L~~~~~~~----------~~~LS 138 (353)
T PRK10851 81 QHYALFRHMTVFDNIAFGLTVLPR-------RER-----PNAAAIKAKVTQLLEMVQLAHLADRY----------PAQLS 138 (353)
T ss_pred cCcccCCCCcHHHHHHhhhhhccc-------ccC-----CCHHHHHHHHHHHHHHcCCchhhhCC----------hhhCC
Confidence 99999975 999999987531000 000 00001133466788888886554443 35799
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH--
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK-- 1335 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~-- 1335 (1374)
||||||++| ||||+++|+++|||||||+||..+.+.+.+.++
T Consensus 139 gGq~QRval------------------------------------ArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l 182 (353)
T PRK10851 139 GGQKQRVAL------------------------------------ARALAVEPQILLLDEPFGALDAQVRKELRRWLRQL 182 (353)
T ss_pred HHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH
Confidence 999999999 999999999999999999999999887766543
Q ss_pred --hcCceEEEecCCCCc-hhhccceEEEEcCC
Q 000647 1336 --DMGITFVTSSQRPAL-IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1336 --~~~~TvI~IaHRl~~-i~~~~~~l~l~~g~ 1364 (1374)
+.|+|+|.|+|+++. ..+.|+++.|.+|+
T Consensus 183 ~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~ 214 (353)
T PRK10851 183 HEELKFTSVFVTHDQEEAMEVADRVVVMSQGN 214 (353)
T ss_pred HHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 248999999999964 67799999996553
No 403
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=316.94 Aligned_cols=201 Identities=22% Similarity=0.232 Sum_probs=159.4
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCC-----ccEEEeCCCCc--------c
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLV-----SGHIAKPGVGS--------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~-----~G~I~~~g~~~--------~ 510 (1374)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|. +|+|.++|.+. .
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 82 (252)
T PRK14272 4 LLSAQDVNIYYG-DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVA 82 (252)
T ss_pred EEEEeeeEEEEC-CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHH
Confidence 588999999986 468999999999999999999999999999999999999874 89999998541 2
Q ss_pred ccccEEEEecCCCCCc-CCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHH
Q 000647 511 LNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLG 588 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRla 588 (1374)
+++.++|+||+|.++. .|+.||+.++....... .....+.+.+.++.+++.+.+.... .....+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~----~~~~~~LS~G~~qrv~ 158 (252)
T PRK14272 83 MRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRL----KTPATGLSGGQQQRLC 158 (252)
T ss_pred hhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhh----cCCcccCCHHHHHHHH
Confidence 3567999999998887 59999998643211100 0001233445566666543221100 0113689999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 589 MARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 589 lARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|++++|++
T Consensus 159 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 222 (252)
T PRK14272 159 IARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLV 222 (252)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999988765 3699999999999886 6899999976
No 404
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-33 Score=316.22 Aligned_cols=203 Identities=22% Similarity=0.293 Sum_probs=164.1
Q ss_pred EEEeeeEEeCCCc---ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCc
Q 000647 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 1171 (1374)
Q Consensus 1100 I~f~~V~~~yp~~---~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r 1171 (1374)
|+++||++.|++. +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999754 37999999999999999999999999999999999999999999999999887542 235
Q ss_pred ccEEEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1172 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1172 ~~i~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
++++|+||+|.+|. .|++||+.++.... +. .....++.+.++++.+++.+..++.
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~-------- 137 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIA----------GV------PKAEIEERVLELLELVGLEDKADAY-------- 137 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHHCCChhhhhcC--------
Confidence 67999999999997 59999997542100 00 0000123456778877775544332
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
...||+|||||++| |||++++|+++||||||++||.++.+.+
T Consensus 138 --~~~LS~G~~qrv~l------------------------------------a~al~~~p~lllLDEP~~~LD~~~~~~l 179 (233)
T cd03258 138 --PAQLSGGQKQRVGI------------------------------------ARALANNPKVLLCDEATSALDPETTQSI 179 (233)
T ss_pred --hhhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEecCCCCcCCHHHHHHH
Confidence 35699999999999 9999999999999999999999999887
Q ss_pred HHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1331 YRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1331 ~~~~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.+.+++ .|+|+|+|+|+++.+ .+.|+++.|.+|+
T Consensus 180 ~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~ 218 (233)
T cd03258 180 LALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGE 218 (233)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 776543 389999999999876 5689999996553
No 405
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=332.52 Aligned_cols=202 Identities=24% Similarity=0.291 Sum_probs=164.5
Q ss_pred EEEeeeEEeCC--C-cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCc
Q 000647 1100 ISFSKLDIITP--S-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 1171 (1374)
Q Consensus 1100 I~f~~V~~~yp--~-~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r 1171 (1374)
|+++||++.|+ + .+++|+|+||+|++||.+||+||||||||||+++|.|+++|.+|+|.++|.++.... ..|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997 2 467999999999999999999999999999999999999999999999999987652 236
Q ss_pred ccEEEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1172 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1172 ~~i~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
++|+||||+|.+|. .|++||+.++.... +. .....++.+.+.++.++|.+...+.
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~----------~~------~~~~~~~~~~~~l~~~gL~~~~~~~-------- 137 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELA----------GT------PKAEIKARVTELLELVGLSDKADRY-------- 137 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHHcCCchhhhCC--------
Confidence 78999999999986 69999998653100 00 0000123456678888775544332
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
...||||||||++| ||||+++|++||||||||+||..+.+.+
T Consensus 138 --~~~LSgGq~qRv~l------------------------------------AraL~~~p~iLlLDEPts~LD~~~~~~l 179 (343)
T PRK11153 138 --PAQLSGGQKQRVAI------------------------------------ARALASNPKVLLCDEATSALDPATTRSI 179 (343)
T ss_pred --hhhCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCCHHHHHHH
Confidence 35799999999999 9999999999999999999999999887
Q ss_pred HHHHHh----cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1331 YRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1331 ~~~~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
.+++++ .|+|+|+|+|+++.+ ++.|+++.|.+|
T Consensus 180 ~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G 217 (343)
T PRK11153 180 LELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAG 217 (343)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 776543 489999999999765 568999999654
No 406
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=318.91 Aligned_cols=194 Identities=21% Similarity=0.247 Sum_probs=162.0
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEe
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 1177 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~V 1177 (1374)
-.|+++||++.|++ +.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.. .+++++|+
T Consensus 11 ~~l~i~~l~~~~~~-~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~---~~~~i~~v 86 (257)
T PRK11247 11 TPLLLNAVSKRYGE-RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAE---AREDTRLM 86 (257)
T ss_pred CcEEEEEEEEEECC-cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHH---hhCceEEE
Confidence 35999999999864 579999999999999999999999999999999999999999999999976643 35679999
Q ss_pred cCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCC
Q 000647 1178 PQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1374)
Q Consensus 1178 pQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~L 1256 (1374)
||+|.+|+ .|++||+.++.... .++++.++++.+++.+...+. ...|
T Consensus 87 ~q~~~l~~~~tv~enl~~~~~~~----------------------~~~~~~~~l~~~gl~~~~~~~----------~~~L 134 (257)
T PRK11247 87 FQDARLLPWKKVIDNVGLGLKGQ----------------------WRDAALQALAAVGLADRANEW----------PAAL 134 (257)
T ss_pred ecCccCCCCCcHHHHHHhcccch----------------------HHHHHHHHHHHcCChhHhcCC----------hhhC
Confidence 99999987 69999998653210 123456677877775543322 3579
Q ss_pred ChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH-
Q 000647 1257 SLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK- 1335 (1374)
Q Consensus 1257 SgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~- 1335 (1374)
|||||||++| ||||+++|+++||||||++||.++.+.+.++++
T Consensus 135 SgGqkqrl~l------------------------------------araL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~ 178 (257)
T PRK11247 135 SGGQKQRVAL------------------------------------ARALIHRPGLLLLDEPLGALDALTRIEMQDLIES 178 (257)
T ss_pred CHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999 999999999999999999999999987766553
Q ss_pred ---hcCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1336 ---DMGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1336 ---~~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
+.++|+|+|+|+++.+ .+.|+++.+.+|
T Consensus 179 ~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G 210 (257)
T PRK11247 179 LWQQHGFTVLLVTHDVSEAVAMADRVLLIEEG 210 (257)
T ss_pred HHHHcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 2489999999999765 678899988654
No 407
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-33 Score=303.11 Aligned_cols=172 Identities=25% Similarity=0.409 Sum_probs=149.1
Q ss_pred cEEEeeeEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCC--cCCccEEEeCCCC--ccccccEE
Q 000647 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPGVG--SDLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~--~~~~G~I~~~g~~--~~~~~~i~ 516 (1374)
.++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++|.+ ...++.++
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~~~~~~~i~ 82 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLDKNFQRSTG 82 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehHHHhhhceE
Confidence 5889999999975 267999999999999999999999999999999999986 4899999999865 33456899
Q ss_pred EEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc
Q 000647 517 YVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH 595 (1374)
Q Consensus 517 ~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~ 595 (1374)
|++|+|.++. .|++||+.++. .++ +||||||||++||||++.
T Consensus 83 ~~~q~~~~~~~~tv~~~l~~~~----------------~~~---------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 83 YVEQQDVHSPNLTVREALRFSA----------------LLR---------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred EecccCccccCCcHHHHHHHHH----------------HHh---------------------cCCHHHhHHHHHHHHHhc
Confidence 9999998776 59999997631 000 599999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhh--HhhccEEEEecCCCc
Q 000647 596 KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPAL--VAFHDVVLSLDGEGE 652 (1374)
Q Consensus 596 ~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~--~~~~d~il~l~~~g~ 652 (1374)
+|+++||||||++||+++.+.+.+.+++ .|+|+|++||+++. ...+|++++|+++|.
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~ 187 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGK 187 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCe
Confidence 9999999999999999999999887764 48999999999973 578999999975343
No 408
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9.3e-34 Score=317.59 Aligned_cols=202 Identities=22% Similarity=0.325 Sum_probs=162.0
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc---CCcccEEE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 1176 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~---~~r~~i~~ 1176 (1374)
|+++||++.|++ +.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..+.+++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (232)
T cd03218 1 LRAENLSKRYGK-RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGY 79 (232)
T ss_pred CeEEEEEEEeCC-EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEE
Confidence 578999999975 56999999999999999999999999999999999999999999999999886652 23457999
Q ss_pred ecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
+||+|.+|++ |++||+.++.... +. ......+.+.++++.+++.+...+ ....
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~ 133 (232)
T cd03218 80 LPQEASIFRKLTVEENILAVLEIR----------GL------SKKEREEKLEELLEEFHITHLRKS----------KASS 133 (232)
T ss_pred ecCCccccccCcHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCChhhhhC----------Chhh
Confidence 9999999987 9999997542100 00 000012234566777766443322 2357
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||+|||||++| |||++++|+++||||||++||.++.+.+.++++
T Consensus 134 LS~G~~qrl~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~~~~~l~ 177 (232)
T cd03218 134 LSGGERRRVEI------------------------------------ARALATNPKFLLLDEPFAGVDPIAVQDIQKIIK 177 (232)
T ss_pred CCHHHHHHHHH------------------------------------HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999988777554
Q ss_pred h---cCceEEEecCCCC-chhhccceEEEEcCC
Q 000647 1336 D---MGITFVTSSQRPA-LIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1336 ~---~~~TvI~IaHRl~-~i~~~~~~l~l~~g~ 1364 (1374)
+ .+.|+|+++|+++ ..++.++++.|.+|+
T Consensus 178 ~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~ 210 (232)
T cd03218 178 ILKDRGIGVLITDHNVRETLSITDRAYIIYEGK 210 (232)
T ss_pred HHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 3 4899999999994 667789999996654
No 409
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1e-33 Score=315.02 Aligned_cols=200 Identities=22% Similarity=0.339 Sum_probs=158.6
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc---CCcccEEE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 1176 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~---~~r~~i~~ 1176 (1374)
|+++||++.|++ +++++|+||+|+|||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..+++++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (222)
T cd03224 1 LEVENLNAGYGK-SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGY 79 (222)
T ss_pred CEEeeEEeecCC-eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEE
Confidence 578999999875 46999999999999999999999999999999999999999999999999887652 23567999
Q ss_pred ecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhC-CCchhhhhhccCCcccccccc
Q 000647 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGV-RLSYLLEREEVGWDANLNWED 1254 (1374)
Q Consensus 1177 VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v-~L~~~v~~~~~Gldt~~~~g~ 1254 (1374)
+||+|.+|.+ |+++|+.++...... ....+.+.++++.+ ++.+ .++. ...
T Consensus 80 ~~q~~~~~~~~t~~~~l~~~~~~~~~------------------~~~~~~~~~~l~~~~~l~~-------~~~~---~~~ 131 (222)
T cd03224 80 VPEGRRIFPELTVEENLLLGAYARRR------------------AKRKARLERVYELFPRLKE-------RRKQ---LAG 131 (222)
T ss_pred eccccccCCCCcHHHHHHHHhhhcCc------------------hhHHHHHHHHHHHHHhhhh-------hhhC---chh
Confidence 9999999987 999999765321000 00112233444443 2221 1222 235
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
.||+|||||++| |||++++|+++||||||++||.++.+.+.+.+
T Consensus 132 ~LS~G~~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l~~~l 175 (222)
T cd03224 132 TLSGGEQQMLAI------------------------------------ARALMSRPKLLLLDEPSEGLAPKIVEEIFEAI 175 (222)
T ss_pred hCCHHHHHHHHH------------------------------------HHHHhcCCCEEEECCCcccCCHHHHHHHHHHH
Confidence 799999999999 99999999999999999999999998877765
Q ss_pred Hh---cCceEEEecCCCCc-hhhccceEEEEcCC
Q 000647 1335 KD---MGITFVTSSQRPAL-IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1335 ~~---~~~TvI~IaHRl~~-i~~~~~~l~l~~g~ 1364 (1374)
++ .++|+|+++|+++. ..+.++++.+.+|+
T Consensus 176 ~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (222)
T cd03224 176 RELRDEGVTILLVEQNARFALEIADRAYVLERGR 209 (222)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCe
Confidence 43 58999999999976 46789999996543
No 410
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=317.30 Aligned_cols=209 Identities=20% Similarity=0.224 Sum_probs=166.7
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCC---CCCCeEecCCCccccc--cCCccc
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP---VVSGSLTKPSQHIDEE--AGSGCG 1173 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~---~~~G~I~idg~dI~~~--~~~r~~ 1173 (1374)
.|+++||++.|++ +++|+|+||+|+|||.++|+||||||||||+++|.|+++ |.+|+|.++|.++.+. ...|.+
T Consensus 2 ~~~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 80 (246)
T PRK14269 2 IAKTTNLNLFYGK-KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKN 80 (246)
T ss_pred ceeeeeeEEEECC-EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhh
Confidence 4789999999975 579999999999999999999999999999999999985 6899999999998765 344668
Q ss_pred EEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1174 IFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1174 i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
|+|+||+|.+|+.|++||+.++.... +. .......++++.++++.+++...+... ++ ...
T Consensus 81 i~~~~q~~~l~~~tv~eni~~~~~~~----------~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~---~~---~~~ 140 (246)
T PRK14269 81 VGMVFQQPNVFVKSIYENISYAPKLH----------GM----IKNKDEEEALVVDCLQKVGLFEEVKDK---LK---QNA 140 (246)
T ss_pred EEEEecCCccccccHHHHhhhHHhhc----------Cc----ccChHHHHHHHHHHHHHcCCChhhhHH---hc---CCc
Confidence 99999999999999999997642100 00 000001233466778888875433221 11 134
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||+|||||++| |||++++|+++||||||++||.++...+.+.
T Consensus 141 ~~LS~G~~qrv~l------------------------------------aral~~~p~lllLDEP~~~LD~~~~~~l~~~ 184 (246)
T PRK14269 141 LALSGGQQQRLCI------------------------------------ARALAIKPKLLLLDEPTSALDPISSGVIEEL 184 (246)
T ss_pred ccCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHH
Confidence 6799999999999 9999999999999999999999999888776
Q ss_pred HHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1334 AKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1334 ~~~--~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+++ .++|+|+|+|+++.+ ++.|+++.|.+|+
T Consensus 185 l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 218 (246)
T PRK14269 185 LKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE 218 (246)
T ss_pred HHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCE
Confidence 653 489999999999755 6789999996654
No 411
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-33 Score=316.47 Aligned_cols=202 Identities=23% Similarity=0.249 Sum_probs=163.2
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++||++.|++ +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... +..++|+||
T Consensus 2 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~---~~~~~~v~q 77 (255)
T PRK11248 2 LQISHLYADYGG-KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP---GAERGVVFQ 77 (255)
T ss_pred EEEEEEEEEeCC-eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC---CCcEEEEeC
Confidence 789999999865 6799999999999999999999999999999999999999999999999987642 235899999
Q ss_pred CCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
+|.+|. .|+++|+.++... .+. .....++.+.++++.+++.+...+. ...|||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~gl~~~~~~~----------~~~LSg 131 (255)
T PRK11248 78 NEGLLPWRNVQDNVAFGLQL----------AGV------EKMQRLEIAHQMLKKVGLEGAEKRY----------IWQLSG 131 (255)
T ss_pred CCccCCCCcHHHHHHhHHHH----------cCC------CHHHHHHHHHHHHHHcCChhHhhCC----------hhhCCH
Confidence 999887 5999999764210 000 0000123466778888775543332 357999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| ||||+++|++|||||||++||.++.+.+.+++++
T Consensus 132 Gq~qrl~l------------------------------------aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~ 175 (255)
T PRK11248 132 GQRQRVGI------------------------------------ARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLW 175 (255)
T ss_pred HHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999887775543
Q ss_pred --cCceEEEecCCCCch-hhccceEEEEcCCCCe
Q 000647 1337 --MGITFVTSSQRPALI-PFHSLELRLIDGEGNW 1367 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~i-~~~~~~l~l~~g~g~~ 1367 (1374)
.|+|+|+|+|++..+ .+.|+++.|.+++|..
T Consensus 176 ~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i 209 (255)
T PRK11248 176 QETGKQVLLITHDIEEAVFMATELVLLSPGPGRV 209 (255)
T ss_pred HhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEE
Confidence 489999999999765 6688999996556654
No 412
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-33 Score=310.29 Aligned_cols=204 Identities=31% Similarity=0.404 Sum_probs=166.3
Q ss_pred EEEeeeEEEcCCC---CeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-C----CccEEEeCCCC------c-
Q 000647 445 IEFSGVKVVTPTG---NVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-L----VSGHIAKPGVG------S- 509 (1374)
Q Consensus 445 i~~~~v~~~~~~~---~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-~----~~G~I~~~g~~------~- 509 (1374)
++++|++..|+.. ..+++|+||++++||+++|||.|||||||+.++|+|+.| | .+|+|.++|.+ +
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 6789999887653 469999999999999999999999999999999999998 3 57999999975 1
Q ss_pred --cc-cccEEEEecCCCC---CcCCHHHHhcCCCCCCcc--cCCCCHHHHHHHHHHcCChh---HHhcCCCCccccCCCC
Q 000647 510 --DL-NKEIFYVPQRPYT---AVGTLRDQLIYPLTSDQE--VEPLTHGGMVELLKNVDLEY---LLDRYPPEKEINWGDE 578 (1374)
Q Consensus 510 --~~-~~~i~~v~Q~p~l---~~~Tv~eni~~~~~~~~~--~~~~~~~~~~~~l~~~~L~~---~~~~~~~~~~~~~g~~ 578 (1374)
++ .++|+++||+|.. +..||.+++.-....... ......+++.++|+.+++.+ ..+.+| .+
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YP--------he 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYP--------HE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCC--------cc
Confidence 22 3689999999852 335888887643321111 01122456788999999975 567778 68
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecCCCce
Q 000647 579 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGEGEW 653 (1374)
Q Consensus 579 LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~~g~~ 653 (1374)
||||||||+.||.|++.+|+++|.||||+|||..+..+|++.+++ .|.|+|+||||+..+. .||+|++|.. |+
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYa--G~ 231 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYA--GR 231 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEEC--cE
Confidence 999999999999999999999999999999999999999887753 5999999999999875 7999999975 45
Q ss_pred EEecc
Q 000647 654 RVHDK 658 (1374)
Q Consensus 654 ~~~~~ 658 (1374)
.++..
T Consensus 232 iVE~g 236 (316)
T COG0444 232 IVEEG 236 (316)
T ss_pred EEEeC
Confidence 66543
No 413
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=324.31 Aligned_cols=200 Identities=21% Similarity=0.223 Sum_probs=163.4
Q ss_pred EEEeeeEEeCCCc----ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc------cC
Q 000647 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------AG 1169 (1374)
Q Consensus 1100 I~f~~V~~~yp~~----~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~------~~ 1169 (1374)
|+|+||++.|+.. +++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|++||.++... ..
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 7899999999743 3699999999999999999999999999999999999999999999999998531 23
Q ss_pred CcccEEEecCCC--CCCCcchHHHhccCCC---hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCc-hhhhhhc
Q 000647 1170 SGCGIFYVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREE 1243 (1374)
Q Consensus 1170 ~r~~i~~VpQ~P--~Lf~GTlR~Nl~yp~~---~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~-~~v~~~~ 1243 (1374)
.|.+++||+|+| .+|.+|+.||+.++.. .+.++ .++.+.++++.++|. .+..+
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~-------------------~~~~~~~~l~~~~L~~~~~~~-- 140 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEK-------------------AEKIAAEKLEMVGLADEFWEK-- 140 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHH-------------------HHHHHHHHHHHcCCChhhccC--
Confidence 466899999999 7899999999976521 00000 123356677777774 23222
Q ss_pred cCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCC
Q 000647 1244 VGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATS 1323 (1374)
Q Consensus 1244 ~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD 1323 (1374)
....||||||||++| ||||+++|++|||||||++||
T Consensus 141 --------~~~~LSgGqkqrvai------------------------------------A~aL~~~p~illLDEPt~gLD 176 (288)
T PRK13643 141 --------SPFELSGGQMRRVAI------------------------------------AGILAMEPEVLVLDEPTAGLD 176 (288)
T ss_pred --------CcccCCHHHHHHHHH------------------------------------HHHHHhCCCEEEEECCccCCC
Confidence 135799999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHH---hcCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1324 VDVEEQLYRLAK---DMGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1324 ~~~e~~l~~~~~---~~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+++.+.+.+.++ ..|+|+|+|+|+++.+ .+.|+++.|.+|.
T Consensus 177 ~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~ 221 (288)
T PRK13643 177 PKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGH 221 (288)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 999987776553 2589999999999866 6899999996654
No 414
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-33 Score=316.61 Aligned_cols=203 Identities=25% Similarity=0.271 Sum_probs=162.4
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEe
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYV 1177 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~V 1177 (1374)
++++||++.|++.+.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...+.+++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 47899999887535699999999999999999999999999999999999999999999999988765 2345689999
Q ss_pred cCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCch--hhhhhccCCcccccccc
Q 000647 1178 PQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY--LLEREEVGWDANLNWED 1254 (1374)
Q Consensus 1178 pQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~--~v~~~~~Gldt~~~~g~ 1254 (1374)
||+|.+|. .|++||+.++... .+. .....++.+.++++.+++.. ...+ ...
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~----------~~~------~~~~~~~~~~~~l~~l~l~~~~~~~~----------~~~ 134 (242)
T cd03295 81 IQQIGLFPHMTVEENIALVPKL----------LKW------PKEKIRERADELLALVGLDPAEFADR----------YPH 134 (242)
T ss_pred ccCccccCCCcHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHHcCCCcHHHHhc----------Chh
Confidence 99999986 6999999754210 000 00001234567777777753 2221 246
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
+||+|||||++| |||++++|+++||||||++||.++.+.+.+.+
T Consensus 135 ~LS~G~~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l~~~L 178 (242)
T cd03295 135 ELSGGQQQRVGV------------------------------------ARALAADPPLLLMDEPFGALDPITRDQLQEEF 178 (242)
T ss_pred hCCHHHHHHHHH------------------------------------HHHHhcCCCEEEecCCcccCCHHHHHHHHHHH
Confidence 799999999999 99999999999999999999999988776655
Q ss_pred Hh----cCceEEEecCCCCc-hhhccceEEEEcCC
Q 000647 1335 KD----MGITFVTSSQRPAL-IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1335 ~~----~~~TvI~IaHRl~~-i~~~~~~l~l~~g~ 1364 (1374)
++ .|+|+|+|+|++.. ..+.|+++.|.+|+
T Consensus 179 ~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~ 213 (242)
T cd03295 179 KRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGE 213 (242)
T ss_pred HHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 43 38999999999975 56788999986654
No 415
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-33 Score=311.46 Aligned_cols=202 Identities=20% Similarity=0.198 Sum_probs=162.0
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEEEec
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 1178 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~~Vp 1178 (1374)
|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...+.+++|+|
T Consensus 1 i~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (220)
T cd03265 1 IEVENLVKKYGD-FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVF 79 (220)
T ss_pred CEEEEEEEEECC-EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEec
Confidence 578999998865 5799999999999999999999999999999999999999999999999877543 23456799999
Q ss_pred CCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|+|.++.+ |+++|+.++... .+. .....++.+.++++.+++.+...+. ...||
T Consensus 80 q~~~~~~~~tv~~~l~~~~~~----------~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS 133 (220)
T cd03265 80 QDLSVDDELTGWENLYIHARL----------YGV------PGAERRERIDELLDFVGLLEAADRL----------VKTYS 133 (220)
T ss_pred CCccccccCcHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHHcCCHHHhhCC----------hhhCC
Confidence 99998875 999999754210 000 0000123456778888876543332 35699
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh-
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD- 1336 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~- 1336 (1374)
||||||++| |||++++|+++||||||++||+++.+.+.+.+++
T Consensus 134 ~G~~qr~~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~ 177 (220)
T cd03265 134 GGMRRRLEI------------------------------------ARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKL 177 (220)
T ss_pred HHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999877765543
Q ss_pred ---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1337 ---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1337 ---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.|+|+|+|+|+++.+ .+.++++.+.+|+
T Consensus 178 ~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 178 KEEFGMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred HHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 389999999999765 5688999996543
No 416
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-33 Score=313.78 Aligned_cols=201 Identities=23% Similarity=0.266 Sum_probs=162.9
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc--------c
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS--------D 510 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~--------~ 510 (1374)
.++++||++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.+. .
T Consensus 3 ~l~~~~v~~~~~-~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 81 (250)
T PRK14266 3 RIEVENLNTYFD-DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVE 81 (250)
T ss_pred EEEEEeEEEEeC-CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHH
Confidence 478999999986 4679999999999999999999999999999999999864 4899999998541 2
Q ss_pred ccccEEEEecCCCCCcCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHH
Q 000647 511 LNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGM 589 (1374)
Q Consensus 511 ~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlal 589 (1374)
+++.++|+||+|.++..|++||+.++....... .....+++.++++.+++.+.+.... + .....||||||||++|
T Consensus 82 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~---~~~~~LS~Gq~qrv~l 157 (250)
T PRK14266 82 LRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKL-D---KSALGLSGGQQQRLCI 157 (250)
T ss_pred HhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHH-h---CCcccCCHHHHHHHHH
Confidence 356799999999999899999998753211100 0112345677889998865432210 0 1136899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh--cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 590 ARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA--MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 590 ARal~~~p~illLDEptsaLD~~~~~~i~~~l~~--~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||++++|+++||||||++||+.+...+.+.+++ .+.|+|++||+++.+. .+|+++++++
T Consensus 158 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~ 220 (250)
T PRK14266 158 ARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLN 220 (250)
T ss_pred HHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEEC
Confidence 9999999999999999999999999999888764 4789999999998775 6889988875
No 417
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=4.4e-33 Score=303.03 Aligned_cols=169 Identities=31% Similarity=0.452 Sum_probs=148.5
Q ss_pred cEEEeeeEEEcCC-----CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCC--cCCccEEEeCCCCc---cccc
Q 000647 444 YIEFSGVKVVTPT-----GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPGVGS---DLNK 513 (1374)
Q Consensus 444 ~i~~~~v~~~~~~-----~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~--~~~~G~I~~~g~~~---~~~~ 513 (1374)
.++++|+++.|++ ++++++|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|.+. ..++
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 82 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDKRSFRK 82 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCchHhhhh
Confidence 4899999999975 367999999999999999999999999999999999999 99999999998651 3567
Q ss_pred cEEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000647 514 EIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1374)
Q Consensus 514 ~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1374)
.++|+||++.++. .|++||+.++.. + ..||||||||++||||
T Consensus 83 ~i~~~~q~~~~~~~~t~~~~i~~~~~----------------~---------------------~~LS~G~~qrv~lara 125 (194)
T cd03213 83 IIGYVPQDDILHPTLTVRETLMFAAK----------------L---------------------RGLSGGERKRVSIALE 125 (194)
T ss_pred eEEEccCcccCCCCCcHHHHHHHHHH----------------h---------------------ccCCHHHHHHHHHHHH
Confidence 8999999998876 599999865310 0 0599999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChh-hH-hhccEEEEecC
Q 000647 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPA-LV-AFHDVVLSLDG 649 (1374)
Q Consensus 593 l~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~-~~-~~~d~il~l~~ 649 (1374)
++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++ .+ ..+|+++++++
T Consensus 126 l~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~ 187 (194)
T cd03213 126 LVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ 187 (194)
T ss_pred HHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC
Confidence 9999999999999999999999999887764 4899999999986 34 57999999976
No 418
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.1e-34 Score=292.64 Aligned_cols=197 Identities=22% Similarity=0.275 Sum_probs=167.8
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc-------cccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS-------DLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~-------~~~~~i~ 516 (1374)
.+..+|+.+.| +++++++++||+|++||++++.||||+||||.|.++.|+.+|++|+|.+++.+- .-+..||
T Consensus 4 ~L~a~~l~K~y-~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGig 82 (243)
T COG1137 4 TLVAENLAKSY-KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIG 82 (243)
T ss_pred EEEehhhhHhh-CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCcc
Confidence 47888999988 467899999999999999999999999999999999999999999999999761 1245699
Q ss_pred EEecCCCCCcC-CHHHHhcCCCCCCcccC--CCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHH
Q 000647 517 YVPQRPYTAVG-TLRDQLIYPLTSDQEVE--PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLF 593 (1374)
Q Consensus 517 ~v~Q~p~l~~~-Tv~eni~~~~~~~~~~~--~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal 593 (1374)
|+||+|.+|.+ ||+|||..-........ .....++++.|+.+++.+..++.. .+||||||+|+.|||||
T Consensus 83 YLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a--------~sLSGGERRR~EIARaL 154 (243)
T COG1137 83 YLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKA--------YSLSGGERRRVEIARAL 154 (243)
T ss_pred cccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcc--------cccccchHHHHHHHHHH
Confidence 99999999986 99999986443322111 123445778999999999888753 78999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHH---HHhcCCEEEEEccCh-hhHhhccEEEEecC
Q 000647 594 YHKPKFAILDECTSAVTTDMEERFCAK---VRAMGTSCITISHRP-ALVAFHDVVLSLDG 649 (1374)
Q Consensus 594 ~~~p~illLDEptsaLD~~~~~~i~~~---l~~~~~TiI~vtH~~-~~~~~~d~il~l~~ 649 (1374)
..+|++++||||++|+||.+...|.+. |++.|.-|++.-|+. +++..|||.+++..
T Consensus 155 a~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~ 214 (243)
T COG1137 155 AANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISD 214 (243)
T ss_pred hcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEec
Confidence 999999999999999999988777664 556799999999986 56789999999975
No 419
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.4e-33 Score=312.17 Aligned_cols=203 Identities=22% Similarity=0.252 Sum_probs=164.9
Q ss_pred CEEEeeeEEeCCCc---ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccC-----C
Q 000647 1099 SISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAG-----S 1170 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~---~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~-----~ 1170 (1374)
.|+++||++.|++. .++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+. .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 58999999998753 369999999999999999999999999999999999999999999999998876521 2
Q ss_pred -cccEEEecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcc
Q 000647 1171 -GCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1374)
Q Consensus 1171 -r~~i~~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt 1248 (1374)
+.+++++||+|.+|.+ |++||+.++..... . ......+++.++++.+++.+..++.
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~----------~------~~~~~~~~~~~~l~~~~l~~~~~~~------ 143 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRG----------E------SSRQSRNGAKALLEQLGLGKRLDHL------ 143 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcC----------C------CHHHHHHHHHHHHHHcCCHhHhhCC------
Confidence 3579999999999875 99999975421000 0 0000123466778888876554443
Q ss_pred ccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHH
Q 000647 1249 NLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEE 1328 (1374)
Q Consensus 1249 ~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~ 1328 (1374)
...||+|||||++| ||||+++|+++||||||++||.++.+
T Consensus 144 ----~~~LS~Ge~qrl~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~ 183 (228)
T PRK10584 144 ----PAQLSGGEQQRVAL------------------------------------ARAFNGRPDVLFADEPTGNLDRQTGD 183 (228)
T ss_pred ----hhhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCCCCCHHHHH
Confidence 34699999999999 99999999999999999999999988
Q ss_pred HHHHHHH----hcCceEEEecCCCCchhhccceEEEEcC
Q 000647 1329 QLYRLAK----DMGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1329 ~l~~~~~----~~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
.+.+.++ +.|.|+|+|+|+++.+...|+++.+.+|
T Consensus 184 ~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g 222 (228)
T PRK10584 184 KIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNG 222 (228)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECC
Confidence 7776553 2489999999999888888999999654
No 420
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.7e-33 Score=332.18 Aligned_cols=203 Identities=18% Similarity=0.264 Sum_probs=168.6
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCC--CeEecCCCccccccCCcccEE
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVS--GSLTKPSQHIDEEAGSGCGIF 1175 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~--G~I~idg~dI~~~~~~r~~i~ 1175 (1374)
|.|+++||++.|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++ |+|.++|.++.+....+++|+
T Consensus 4 ~~l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig 82 (362)
T TIGR03258 4 GGIRIDHLRVAYGA-NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLA 82 (362)
T ss_pred eEEEEEEEEEEECC-eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEE
Confidence 67999999999965 569999999999999999999999999999999999999999 999999999876643456799
Q ss_pred EecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccccc
Q 000647 1176 YVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1374)
Q Consensus 1176 ~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~ 1254 (1374)
+|+|+|.+|+. |+++||.|+..... . .....+..+.++++.++|.++.++.| .
T Consensus 83 ~vfQ~~~l~p~~tv~enl~~~l~~~~----------~------~~~~~~~~v~~~l~~~gL~~~~~~~~----------~ 136 (362)
T TIGR03258 83 LLFQNYALFPHLKVEDNVAFGLRAQK----------M------PKADIAERVADALKLVGLGDAAAHLP----------A 136 (362)
T ss_pred EEECCcccCCCCcHHHHHHHHHHHcC----------C------CHHHHHHHHHHHHHhcCCCchhhCCh----------h
Confidence 99999999976 99999998753100 0 00001234667888888877665543 5
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
+||||||||+|| ||||+++|++||||||||+||....+.+.+.+
T Consensus 137 ~LSgGq~QRvaL------------------------------------ARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l 180 (362)
T TIGR03258 137 QLSGGMQQRIAI------------------------------------ARAIAIEPDVLLLDEPLSALDANIRANMREEI 180 (362)
T ss_pred hCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCccccCCHHHHHHHHHHH
Confidence 699999999999 99999999999999999999999987776644
Q ss_pred H----hc-CceEEEecCCCCc-hhhccceEEEEcC
Q 000647 1335 K----DM-GITFVTSSQRPAL-IPFHSLELRLIDG 1363 (1374)
Q Consensus 1335 ~----~~-~~TvI~IaHRl~~-i~~~~~~l~l~~g 1363 (1374)
+ +. |+|+|.|+|+++. ....|+++.|.+|
T Consensus 181 ~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 181 AALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred HHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 3 23 7999999999965 6779999999654
No 421
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=5.3e-33 Score=299.39 Aligned_cols=161 Identities=27% Similarity=0.377 Sum_probs=142.8
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-c------cccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-S------DLNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~------~~~~~i~ 516 (1374)
.++++|+++.| +++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ . ..++.++
T Consensus 4 ~l~~~~l~~~~-----~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (182)
T cd03215 4 VLEVRGLSVKG-----AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGIA 78 (182)
T ss_pred EEEEeccEEEe-----eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCeE
Confidence 58999999987 8999999999999999999999999999999999999999999999854 1 1356799
Q ss_pred EEecCC---C-CCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHH
Q 000647 517 YVPQRP---Y-TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARL 592 (1374)
Q Consensus 517 ~v~Q~p---~-l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARa 592 (1374)
|+||+| . .+..|++||+.++.. ||||||||++||||
T Consensus 79 ~~~q~~~~~~~~~~~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~a 118 (182)
T cd03215 79 YVPEDRKREGLVLDLSVAENIALSSL----------------------------------------LSGGNQQKVVLARW 118 (182)
T ss_pred EecCCcccCcccCCCcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHH
Confidence 999985 3 445799999876310 99999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 593 FYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 593 l~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
++++|+++||||||++||+++.+.+.+.+++ .+.|+|++||+++.+. .+|+++++++
T Consensus 119 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~ 179 (182)
T cd03215 119 LARDPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYE 179 (182)
T ss_pred HccCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecC
Confidence 9999999999999999999999999888764 4799999999998775 5999999975
No 422
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=332.78 Aligned_cols=203 Identities=20% Similarity=0.330 Sum_probs=166.0
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEec
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVP 1178 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~Vp 1178 (1374)
.|+++|+++.|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++......+++|+|||
T Consensus 3 ~l~i~~l~~~~~~-~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~ 81 (369)
T PRK11000 3 SVTLRNVTKAYGD-VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVF 81 (369)
T ss_pred EEEEEEEEEEeCC-eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEe
Confidence 3899999999965 569999999999999999999999999999999999999999999999998876643456799999
Q ss_pred CCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|+|.+|+. |++|||.|+.... +. .....++.+.++++.++|.++.++. ...||
T Consensus 82 Q~~~l~~~~tv~eni~~~~~~~----------~~------~~~~~~~~~~~~l~~lgL~~~~~~~----------~~~LS 135 (369)
T PRK11000 82 QSYALYPHLSVAENMSFGLKLA----------GA------KKEEINQRVNQVAEVLQLAHLLDRK----------PKALS 135 (369)
T ss_pred CCcccCCCCCHHHHHHhHHhhc----------CC------CHHHHHHHHHHHHHHcCChhhhcCC----------hhhCC
Confidence 99999975 9999998764210 00 0000123466778888886554443 35699
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH--
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK-- 1335 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~-- 1335 (1374)
||||||++| ||||+++|++||||||||+||..+.+.+.+.++
T Consensus 136 gGq~QRvaL------------------------------------AraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l 179 (369)
T PRK11000 136 GGQRQRVAI------------------------------------GRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRL 179 (369)
T ss_pred HHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH
Confidence 999999999 999999999999999999999999887766543
Q ss_pred --hcCceEEEecCCCCc-hhhccceEEEEcCC
Q 000647 1336 --DMGITFVTSSQRPAL-IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1336 --~~~~TvI~IaHRl~~-i~~~~~~l~l~~g~ 1364 (1374)
+.|.|+|.|+|+++. ....|+++.|.+|+
T Consensus 180 ~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~ 211 (369)
T PRK11000 180 HKRLGRTMIYVTHDQVEAMTLADKIVVLDAGR 211 (369)
T ss_pred HHHhCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 248999999999964 56789999996553
No 423
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=321.40 Aligned_cols=200 Identities=23% Similarity=0.311 Sum_probs=167.1
Q ss_pred CEEEeeeEEeCCC-cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEE
Q 000647 1099 SISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIF 1175 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~-~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~ 1175 (1374)
.|+++||++.|++ .+++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.++... ...+++|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 4899999999975 46799999999999999999999999999999999999999999999999998765 23456799
Q ss_pred EecCCC--CCCCcchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1176 YVPQRP--YTCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1176 ~VpQ~P--~Lf~GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
|+||+| .++..|++|||.++... ++. ..++.+.++++.++|.+.+.+.
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~-------------------~~~~~~~~~l~~~gL~~~~~~~-------- 137 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPRE-------------------EMVERVDQALRQVGMEDFLNRE-------- 137 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHH-------------------HHHHHHHHHHHHcCChhhhhCC--------
Confidence 999999 56778999999865311 000 0123456778888886665543
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
...||||||||++| ||||+++|+++||||||++||+++.+.+
T Consensus 138 --~~~LS~G~~qrv~l------------------------------------aral~~~p~lllLDEPt~gLD~~~~~~l 179 (279)
T PRK13635 138 --PHRLSGGQKQRVAI------------------------------------AGVLALQPDIIILDEATSMLDPRGRREV 179 (279)
T ss_pred --cccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCCHHHHHHH
Confidence 34699999999999 9999999999999999999999999888
Q ss_pred HHHHHh----cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1331 YRLAKD----MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1331 ~~~~~~----~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
.+++++ .|+|+|+|+|++..+...++++.|.+|
T Consensus 180 ~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G 216 (279)
T PRK13635 180 LETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKG 216 (279)
T ss_pred HHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECC
Confidence 776543 389999999999888888999999654
No 424
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.5e-33 Score=331.73 Aligned_cols=201 Identities=25% Similarity=0.327 Sum_probs=169.2
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEe
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 1177 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~V 1177 (1374)
..|+++|+++.|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.++.+....+++|++|
T Consensus 13 ~~L~l~~l~~~~~~-~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 91 (375)
T PRK09452 13 PLVELRGISKSFDG-KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNTV 91 (375)
T ss_pred ceEEEEEEEEEECC-eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 35899999999964 56999999999999999999999999999999999999999999999999987764345679999
Q ss_pred cCCCCCCCc-chHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1178 PQRPYTCLG-TLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1178 pQ~P~Lf~G-TlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
+|+|.||+. |++|||.|+... ...+ .++.+.++++.++|.++.++.|
T Consensus 92 fQ~~~lfp~ltv~eNi~~~l~~~~~~~~~-------------------~~~~~~~~l~~~~l~~~~~~~p---------- 142 (375)
T PRK09452 92 FQSYALFPHMTVFENVAFGLRMQKTPAAE-------------------ITPRVMEALRMVQLEEFAQRKP---------- 142 (375)
T ss_pred ecCcccCCCCCHHHHHHHHHhhcCCCHHH-------------------HHHHHHHHHHHcCCchhhhCCh----------
Confidence 999999976 999999987531 0100 1234567788888877666543
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
.+||||||||+|| ||||+++|++||||||||+||....+.+++.
T Consensus 143 ~~LSgGq~QRVaL------------------------------------ARaL~~~P~llLLDEP~s~LD~~~r~~l~~~ 186 (375)
T PRK09452 143 HQLSGGQQQRVAI------------------------------------ARAVVNKPKVLLLDESLSALDYKLRKQMQNE 186 (375)
T ss_pred hhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH
Confidence 5699999999999 9999999999999999999999998877665
Q ss_pred HH----hcCceEEEecCCCCc-hhhccceEEEEcCC
Q 000647 1334 AK----DMGITFVTSSQRPAL-IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1334 ~~----~~~~TvI~IaHRl~~-i~~~~~~l~l~~g~ 1364 (1374)
++ +.|+|+|.|+|++.. ..+.|+++.+.+|+
T Consensus 187 L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~ 222 (375)
T PRK09452 187 LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGR 222 (375)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 43 358999999999964 67899999997654
No 425
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=4.2e-33 Score=311.50 Aligned_cols=203 Identities=29% Similarity=0.366 Sum_probs=158.6
Q ss_pred EEEeeeEEeCCCc---ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCc
Q 000647 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 1171 (1374)
Q Consensus 1100 I~f~~V~~~yp~~---~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r 1171 (1374)
|+++||++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 7899999999764 37999999999999999999999999999999999999999999999999887642 346
Q ss_pred ccEEEecCCC--CCC-CcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHH-HHHHHHhCCCc-hhhhhhccCC
Q 000647 1172 CGIFYVPQRP--YTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSY-LKTILEGVRLS-YLLEREEVGW 1246 (1374)
Q Consensus 1172 ~~i~~VpQ~P--~Lf-~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~-l~~~L~~v~L~-~~v~~~~~Gl 1246 (1374)
++++|+||+| +++ ..|+++|+.++... ... . ........ ..++++.+++. ....+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~----------~~~-~----~~~~~~~~~~~~~l~~~~l~~~~~~~----- 141 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRI----------HGK-L----SKKEARKEAVLLLLVGVGLPEEVLNR----- 141 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHh----------ccC-C----cHHHHHHHHHHHHHHHCCCChhHhhC-----
Confidence 6899999999 444 57999999653210 000 0 00000011 12456666653 22222
Q ss_pred ccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHH
Q 000647 1247 DANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDV 1326 (1374)
Q Consensus 1247 dt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~ 1326 (1374)
....||||||||++| ||||+++|+++||||||++||.++
T Consensus 142 -----~~~~LS~G~~qrv~l------------------------------------aral~~~p~lllLDEPt~~LD~~~ 180 (228)
T cd03257 142 -----YPHELSGGQRQRVAI------------------------------------ARALALNPKLLIADEPTSALDVSV 180 (228)
T ss_pred -----CchhcCHHHHHHHHH------------------------------------HHHHhcCCCEEEecCCCCCCCHHH
Confidence 235699999999999 999999999999999999999999
Q ss_pred HHHHHHHHHh----cCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1327 EEQLYRLAKD----MGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1327 e~~l~~~~~~----~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
.+.+.+.+++ .|+|+|+++|+++.+. +.|+++.|.+|
T Consensus 181 ~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G 222 (228)
T cd03257 181 QAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAG 222 (228)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCC
Confidence 9887776543 3899999999998776 78999999654
No 426
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-33 Score=324.44 Aligned_cols=200 Identities=22% Similarity=0.243 Sum_probs=163.0
Q ss_pred EEEeeeEEeCCCc----ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc------cC
Q 000647 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------AG 1169 (1374)
Q Consensus 1100 I~f~~V~~~yp~~----~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~------~~ 1169 (1374)
|+++||++.|+.. +++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.++... ..
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 7899999998752 5799999999999999999999999999999999999999999999999988531 23
Q ss_pred CcccEEEecCCC--CCCCcchHHHhccCCC---hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCc-hhhhhhc
Q 000647 1170 SGCGIFYVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLEREE 1243 (1374)
Q Consensus 1170 ~r~~i~~VpQ~P--~Lf~GTlR~Nl~yp~~---~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~-~~v~~~~ 1243 (1374)
.|++|+||||+| .+|+.|+++||.++.. .+..+ ..+.+.++++.++|. .+.++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~-------------------~~~~~~~~l~~~gL~~~~~~~-- 141 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEED-------------------AKQKAREMIELVGLPEELLAR-- 141 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHH-------------------HHHHHHHHHHHCCCChhhhhC--
Confidence 456799999998 6888899999976521 01100 012355677777774 22222
Q ss_pred cCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCC
Q 000647 1244 VGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATS 1323 (1374)
Q Consensus 1244 ~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD 1323 (1374)
....||||||||++| ||||+.+|++|||||||++||
T Consensus 142 --------~~~~LSgGq~qrv~l------------------------------------AraL~~~P~llllDEPt~~LD 177 (290)
T PRK13634 142 --------SPFELSGGQMRRVAI------------------------------------AGVLAMEPEVLVLDEPTAGLD 177 (290)
T ss_pred --------CcccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEECCcccCC
Confidence 245799999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1324 VDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1324 ~~~e~~l~~~~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+.+...+.+++++ .|.|+|+|+|+++.+ ++.|+++.|.+|+
T Consensus 178 ~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~ 223 (290)
T PRK13634 178 PKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGT 223 (290)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 9999877765542 489999999999765 6789999997664
No 427
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-33 Score=320.42 Aligned_cols=203 Identities=19% Similarity=0.185 Sum_probs=165.7
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc---cCCcccEEE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE---AGSGCGIFY 1176 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~---~~~r~~i~~ 1176 (1374)
|+++||++.|+..+.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...++++++
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (274)
T PRK13644 2 IRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVGI 81 (274)
T ss_pred EEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheEE
Confidence 78999999997666799999999999999999999999999999999999999999999999988754 234567999
Q ss_pred ecCCCC--CCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccccc
Q 000647 1177 VPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1374)
Q Consensus 1177 VpQ~P~--Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~ 1254 (1374)
|||+|. ++..|+++||.++.... +. .....++.+.++++.++|.+...+. ..
T Consensus 82 v~q~~~~~~~~~tv~enl~~~~~~~----------~~------~~~~~~~~~~~~l~~~gl~~~~~~~----------~~ 135 (274)
T PRK13644 82 VFQNPETQFVGRTVEEDLAFGPENL----------CL------PPIEIRKRVDRALAEIGLEKYRHRS----------PK 135 (274)
T ss_pred EEEChhhhcccchHHHHHHhhHHHc----------CC------CHHHHHHHHHHHHHHCCCHHHhcCC----------cc
Confidence 999995 56789999997642100 00 0000123356677777776554332 35
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
.||+|||||++| ||||+++|+++||||||++||+.+.+.+.+.+
T Consensus 136 ~LS~G~~qrv~l------------------------------------aral~~~p~lllLDEPt~gLD~~~~~~l~~~l 179 (274)
T PRK13644 136 TLSGGQGQCVAL------------------------------------AGILTMEPECLIFDEVTSMLDPDSGIAVLERI 179 (274)
T ss_pred cCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 699999999999 99999999999999999999999988777655
Q ss_pred H---hcCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1335 K---DMGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1335 ~---~~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
+ ..|+|+|+++|+++.+...|+++.+.+|+
T Consensus 180 ~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~ 212 (274)
T PRK13644 180 KKLHEKGKTIVYITHNLEELHDADRIIVMDRGK 212 (274)
T ss_pred HHHHhCCCEEEEEecCHHHHhhCCEEEEEECCE
Confidence 3 35899999999998889999999996554
No 428
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=3.6e-33 Score=305.56 Aligned_cols=192 Identities=26% Similarity=0.345 Sum_probs=159.1
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEEEec
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 1178 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~~Vp 1178 (1374)
|+++||++.|++ +.+|+|+||+|++||.+||+|+||||||||+++|.|+++|.+|+|.++|.++... ...+.+++++|
T Consensus 1 l~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (201)
T cd03231 1 LEADELTCERDG-RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLG 79 (201)
T ss_pred CEEEEEEEEeCC-ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEec
Confidence 478999998865 5799999999999999999999999999999999999999999999999887654 34566899999
Q ss_pred CCCCCC-CcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf-~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|+|.++ ..|++||+.++... ..++.+.++++.+++...... ....||
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~----------------------~~~~~~~~~l~~~~l~~~~~~----------~~~~LS 127 (201)
T cd03231 80 HAPGIKTTLSVLENLRFWHAD----------------------HSDEQVEEALARVGLNGFEDR----------PVAQLS 127 (201)
T ss_pred cccccCCCcCHHHHHHhhccc----------------------ccHHHHHHHHHHcCChhhhcC----------chhhCC
Confidence 999986 57999999764210 023446677788877543222 135699
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh-
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD- 1336 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~- 1336 (1374)
||||||++| |||++++|+++||||||++||....+.+.+.+++
T Consensus 128 ~G~~qrl~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~ 171 (201)
T cd03231 128 AGQQRRVAL------------------------------------ARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGH 171 (201)
T ss_pred HHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999888776643
Q ss_pred --cCceEEEecCCC-CchhhccceEEE
Q 000647 1337 --MGITFVTSSQRP-ALIPFHSLELRL 1360 (1374)
Q Consensus 1337 --~~~TvI~IaHRl-~~i~~~~~~l~l 1360 (1374)
.|+|+|+|+|+. ...++.++.+++
T Consensus 172 ~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 172 CARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred HhCCCEEEEEecCchhhhhccceeEec
Confidence 489999999986 566777777766
No 429
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3e-33 Score=317.34 Aligned_cols=203 Identities=21% Similarity=0.259 Sum_probs=164.0
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----------
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA----------- 1168 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~----------- 1168 (1374)
|+++||++.|++ +++++|+||+|+|||.++|+||||||||||+++|.|+++|.+|+|.++|.++....
T Consensus 1 i~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ 79 (252)
T TIGR03005 1 VRFSDVTKRFGI-LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADE 79 (252)
T ss_pred CEEEEEEEEeCC-eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccch
Confidence 579999999975 57999999999999999999999999999999999999999999999999886431
Q ss_pred ----CCcccEEEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhc
Q 000647 1169 ----GSGCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREE 1243 (1374)
Q Consensus 1169 ----~~r~~i~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~ 1243 (1374)
..|+++++|||+|.+|. +|+++|+.++.... .+. .....++.+.++++.+++.+...+.
T Consensus 80 ~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~---------~~~------~~~~~~~~~~~~l~~~gl~~~~~~~- 143 (252)
T TIGR03005 80 KHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV---------LGM------ARAEAEKRAMELLDMVGLADKADHM- 143 (252)
T ss_pred hHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh---------cCC------CHHHHHHHHHHHHHHcCChhHhhcC-
Confidence 24668999999999885 79999997531100 000 0001133466778888776554432
Q ss_pred cCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCC
Q 000647 1244 VGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATS 1323 (1374)
Q Consensus 1244 ~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD 1323 (1374)
...||||||||++| ||||+++|+++||||||++||
T Consensus 144 ---------~~~LS~G~~qrv~l------------------------------------aral~~~p~llllDEP~~~LD 178 (252)
T TIGR03005 144 ---------PAQLSGGQQQRVAI------------------------------------ARALAMRPKVMLFDEVTSALD 178 (252)
T ss_pred ---------hhhcCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCC
Confidence 35799999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1324 VDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1324 ~~~e~~l~~~~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.++.+.+.+++++ .|.|+|+|+|++..+ ++.|+++.|.+|+
T Consensus 179 ~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 224 (252)
T TIGR03005 179 PELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGR 224 (252)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 9999877665542 489999999999876 6789999996654
No 430
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.3e-33 Score=296.14 Aligned_cols=205 Identities=20% Similarity=0.248 Sum_probs=168.2
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCcc
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGC 1172 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r~ 1172 (1374)
-.|++++|++.+ +++.|++|+||+|++||.++|+||||||||||++++.|++.|++|+|.++|.||.++. ..|+
T Consensus 7 ~~I~vr~v~~~f-G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 7 PLIEVRGVTKSF-GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred ceEEEeeeeeec-CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 469999999988 6678999999999999999999999999999999999999999999999999999882 4578
Q ss_pred cEEEecCCCCCCCc-chHHHhccCCCh----hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCc
Q 000647 1173 GIFYVPQRPYTCLG-TLRDQIIYPLSR----EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 1247 (1374)
Q Consensus 1173 ~i~~VpQ~P~Lf~G-TlR~Nl~yp~~~----~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gld 1247 (1374)
+++++.|.--||+. |++||+.||+.. ++.++++ -...=|+.|||..-...
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~-------------------lv~~KL~~VGL~~~~~~------ 140 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRE-------------------LVLMKLELVGLRGAAAD------ 140 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhhccCCHHHHHH-------------------HHHHHHHhcCCChhhhh------
Confidence 89999999999977 999999999742 1111111 11223566766543111
Q ss_pred cccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHH
Q 000647 1248 ANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVE 1327 (1374)
Q Consensus 1248 t~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e 1327 (1374)
-..+.||||.+.|.|+ |||+.-+|.|+++|||||+||+-+.
T Consensus 141 ---~~PsELSGGM~KRvaL------------------------------------ARAialdPell~~DEPtsGLDPI~a 181 (263)
T COG1127 141 ---LYPSELSGGMRKRVAL------------------------------------ARAIALDPELLFLDEPTSGLDPISA 181 (263)
T ss_pred ---hCchhhcchHHHHHHH------------------------------------HHHHhcCCCEEEecCCCCCCCcchH
Confidence 1357899999999999 9999999999999999999999987
Q ss_pred HHHHHHHH----hcCceEEEecCCC-CchhhccceEEEEcCCCCe
Q 000647 1328 EQLYRLAK----DMGITFVTSSQRP-ALIPFHSLELRLIDGEGNW 1367 (1374)
Q Consensus 1328 ~~l~~~~~----~~~~TvI~IaHRl-~~i~~~~~~l~l~~g~g~~ 1367 (1374)
..+.++++ ..|.|+|+|+|++ ++....|+...|.||+=-|
T Consensus 182 ~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~ 226 (263)
T COG1127 182 GVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIA 226 (263)
T ss_pred HHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEE
Confidence 66655554 3599999999999 5667779999997776444
No 431
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-33 Score=330.75 Aligned_cols=203 Identities=19% Similarity=0.261 Sum_probs=168.2
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEe
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYV 1177 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~V 1177 (1374)
..|+++||++.|++ ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.++.+....+++++||
T Consensus 18 ~~l~l~~v~~~~~~-~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v 96 (377)
T PRK11607 18 PLLEIRNLTKSFDG-QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMM 96 (377)
T ss_pred ceEEEEeEEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 45999999998864 57999999999999999999999999999999999999999999999999887764445679999
Q ss_pred cCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCC
Q 000647 1178 PQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1374)
Q Consensus 1178 pQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~L 1256 (1374)
+|+|.||+. |++|||.|+..... . ......+++.++++.++|.++.++. ...|
T Consensus 97 fQ~~~lfp~ltv~eNi~~~l~~~~----------~------~~~~~~~~v~~~l~~l~L~~~~~~~----------~~~L 150 (377)
T PRK11607 97 FQSYALFPHMTVEQNIAFGLKQDK----------L------PKAEIASRVNEMLGLVHMQEFAKRK----------PHQL 150 (377)
T ss_pred eCCCccCCCCCHHHHHHHHHHHcC----------C------CHHHHHHHHHHHHHHcCCchhhcCC----------hhhC
Confidence 999999976 99999998753100 0 0000123466788888887665544 3569
Q ss_pred ChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH----
Q 000647 1257 SLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR---- 1332 (1374)
Q Consensus 1257 SgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~---- 1332 (1374)
|||||||+|| ||||+++|++||||||||+||....+.+.+
T Consensus 151 SgGq~QRVaL------------------------------------ARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~ 194 (377)
T PRK11607 151 SGGQRQRVAL------------------------------------ARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVD 194 (377)
T ss_pred CHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 9999999999 999999999999999999999999877654
Q ss_pred HHHhcCceEEEecCCCCc-hhhccceEEEEcC
Q 000647 1333 LAKDMGITFVTSSQRPAL-IPFHSLELRLIDG 1363 (1374)
Q Consensus 1333 ~~~~~~~TvI~IaHRl~~-i~~~~~~l~l~~g 1363 (1374)
+.++.|+|+|.|+|+++. ....|+++.|.+|
T Consensus 195 l~~~~g~tii~vTHd~~ea~~laDri~vl~~G 226 (377)
T PRK11607 195 ILERVGVTCVMVTHDQEEAMTMAGRIAIMNRG 226 (377)
T ss_pred HHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCC
Confidence 334468999999999965 6789999999655
No 432
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.3e-33 Score=332.37 Aligned_cols=207 Identities=19% Similarity=0.254 Sum_probs=168.9
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEE
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~ 1176 (1374)
.|+++||++.|++ +.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.+. ..++++|++
T Consensus 3 ~L~~~nls~~y~~-~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 3 MIDVSDLSVEFGD-TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred eEEEeeEEEEECC-EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 3899999999975 6799999999999999999999999999999999999999999999999998875 245668999
Q ss_pred ecCCCCC-CCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1177 VPQRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1177 VpQ~P~L-f~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
|||+|.+ |..|++||+.++....-. . ........++.+.++++.+++.++.++. ..+
T Consensus 82 v~q~~~l~~~~tv~e~v~~~~~~~~~-----~-------~~~~~~~~~~~v~~~le~vgl~~~~~~~----------~~~ 139 (402)
T PRK09536 82 VPQDTSLSFEFDVRQVVEMGRTPHRS-----R-------FDTWTETDRAAVERAMERTGVAQFADRP----------VTS 139 (402)
T ss_pred EccCCCCCCCCCHHHHHHhccchhcc-----c-------ccCCCHHHHHHHHHHHHHcCCchhhcCC----------hhh
Confidence 9999998 678999999875321000 0 0000011234577888988887665442 357
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||||||||++| ||||+++|++|||||||++||......+.++++
T Consensus 140 LSgGerQRv~I------------------------------------ArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~ 183 (402)
T PRK09536 140 LSGGERQRVLL------------------------------------ARALAQATPVLLLDEPTASLDINHQVRTLELVR 183 (402)
T ss_pred CCHHHHHHHHH------------------------------------HHHHHcCCCEEEEECCcccCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999887766554
Q ss_pred h---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1336 D---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1336 ~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+ .|.|+|+++|+++.+ ++.|+.+.|.+|+
T Consensus 184 ~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~ 216 (402)
T PRK09536 184 RLVDDGKTAVAAIHDLDLAARYCDELVLLADGR 216 (402)
T ss_pred HHHhcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 3 589999999999887 7789999986554
No 433
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-33 Score=319.97 Aligned_cols=200 Identities=24% Similarity=0.294 Sum_probs=166.0
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEe
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYV 1177 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~V 1177 (1374)
++++||++.|++.+.+|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++... ...+.++++|
T Consensus 4 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v 83 (277)
T PRK13652 4 IETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGLV 83 (277)
T ss_pred EEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEEE
Confidence 78999999998666799999999999999999999999999999999999999999999999988654 2345679999
Q ss_pred cCCC--CCCCcchHHHhccCCC---hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccc
Q 000647 1178 PQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1374)
Q Consensus 1178 pQ~P--~Lf~GTlR~Nl~yp~~---~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~ 1252 (1374)
||+| .+|..|+++|+.++.. .+.+ ..++.+.++++.++|.+...+.
T Consensus 84 ~q~~~~~~~~~tv~~~l~~~~~~~~~~~~-------------------~~~~~~~~~l~~~~l~~~~~~~---------- 134 (277)
T PRK13652 84 FQNPDDQIFSPTVEQDIAFGPINLGLDEE-------------------TVAHRVSSALHMLGLEELRDRV---------- 134 (277)
T ss_pred ecCcccccccccHHHHHHhHHHHcCCCHH-------------------HHHHHHHHHHHHCCChhHhcCC----------
Confidence 9998 4778899999976421 0000 0123456778888886555443
Q ss_pred ccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH
Q 000647 1253 EDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR 1332 (1374)
Q Consensus 1253 g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~ 1332 (1374)
...||+|||||++| ||||+++|++|||||||++||+.+.+.+.+
T Consensus 135 ~~~LS~Gq~qrl~l------------------------------------araL~~~p~llilDEPt~gLD~~~~~~l~~ 178 (277)
T PRK13652 135 PHHLSGGEKKRVAI------------------------------------AGVIAMEPQVLVLDEPTAGLDPQGVKELID 178 (277)
T ss_pred cccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCCHHHHHHHHH
Confidence 35699999999999 999999999999999999999999987766
Q ss_pred HHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1333 LAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1333 ~~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
++++ .|+|+|.++|+++.+ ++.|+++.|.+|+
T Consensus 179 ~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~ 215 (277)
T PRK13652 179 FLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGR 215 (277)
T ss_pred HHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCe
Confidence 5542 389999999999877 6889999996654
No 434
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.8e-33 Score=302.05 Aligned_cols=168 Identities=27% Similarity=0.357 Sum_probs=149.9
Q ss_pred EEEeeeEEeCCCc-ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEEEe
Q 000647 1100 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYV 1177 (1374)
Q Consensus 1100 I~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~~V 1177 (1374)
|+++|+++.|++. +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ..+|++++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 5789999999764 5799999999999999999999999999999999999999999999999887654 2346679999
Q ss_pred cCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1178 PQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1178 pQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
||+|.+|++|++||+ + ..||
T Consensus 81 ~q~~~~~~~tv~~~i--~----------------------------------------------------------~~LS 100 (178)
T cd03247 81 NQRPYLFDTTLRNNL--G----------------------------------------------------------RRFS 100 (178)
T ss_pred ccCCeeecccHHHhh--c----------------------------------------------------------ccCC
Confidence 999999999998886 1 2379
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh-
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD- 1336 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~- 1336 (1374)
+|||||++| |||++++|+++||||||++||.++.+.+.+.+++
T Consensus 101 ~G~~qrv~l------------------------------------aral~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~ 144 (178)
T cd03247 101 GGERQRLAL------------------------------------ARILLQDAPIVLLDEPTVGLDPITERQLLSLIFEV 144 (178)
T ss_pred HHHHHHHHH------------------------------------HHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999888776653
Q ss_pred -cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1337 -MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1337 -~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
.++|+|.++|+++.++..++.+.+.+|
T Consensus 145 ~~~~tii~~sh~~~~~~~~d~~~~l~~g 172 (178)
T cd03247 145 LKDKTLIWITHHLTGIEHMDKILFLENG 172 (178)
T ss_pred cCCCEEEEEecCHHHHHhCCEEEEEECC
Confidence 489999999999999999999999654
No 435
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=319.07 Aligned_cols=199 Identities=21% Similarity=0.283 Sum_probs=163.0
Q ss_pred CCcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc-----CCccEEEeCCCCc-------
Q 000647 442 ANYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP-----LVSGHIAKPGVGS------- 509 (1374)
Q Consensus 442 ~~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~-----~~~G~I~~~g~~~------- 509 (1374)
...|+++|+++.|++ +++|+++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 43 ~~~l~i~nl~~~~~~-~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~ 121 (305)
T PRK14264 43 DAKLSVEDLDVYYGD-DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNL 121 (305)
T ss_pred CceEEEEEEEEEeCC-eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccH
Confidence 346999999999864 679999999999999999999999999999999999986 6899999998531
Q ss_pred -cccccEEEEecCCCCCcCCHHHHhcCCCCCCc------------cc-CCCCHHHHHHHHHHcCChh----HHhcCCCCc
Q 000647 510 -DLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQ------------EV-EPLTHGGMVELLKNVDLEY----LLDRYPPEK 571 (1374)
Q Consensus 510 -~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~------------~~-~~~~~~~~~~~l~~~~L~~----~~~~~~~~~ 571 (1374)
.+++.++|+||++.++..|++||+.++..... .. ....++++.++++.+++.+ ..++.+
T Consensus 122 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--- 198 (305)
T PRK14264 122 VELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRLDDNA--- 198 (305)
T ss_pred HHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHhcCcc---
Confidence 23467999999999888999999997532100 00 0112345778888888853 233322
Q ss_pred cccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHhc--CCEEEEEccChhhHh-hccEEE-Ee
Q 000647 572 EINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAM--GTSCITISHRPALVA-FHDVVL-SL 647 (1374)
Q Consensus 572 ~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~~--~~TiI~vtH~~~~~~-~~d~il-~l 647 (1374)
.+||||||||++|||||+++|+++||||||++||+.+...+.+.+++. +.|+|++||+++.+. .+|+++ ++
T Consensus 199 -----~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 199 -----LGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred -----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 689999999999999999999999999999999999999999988753 689999999999875 699975 56
Q ss_pred cC
Q 000647 648 DG 649 (1374)
Q Consensus 648 ~~ 649 (1374)
++
T Consensus 274 ~~ 275 (305)
T PRK14264 274 TG 275 (305)
T ss_pred cC
Confidence 64
No 436
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.2e-33 Score=282.30 Aligned_cols=203 Identities=18% Similarity=0.232 Sum_probs=170.2
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|.+++|.|.|...+. .++++|++||.|||+||||||||||++++.||..|.+|+|.|+|+|.....-+++-++++.|
T Consensus 2 l~L~~V~~~y~~~~~---~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQ 78 (231)
T COG3840 2 LALDDVRFSYGHLPM---RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQ 78 (231)
T ss_pred ccccceEEeeCcceE---EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhh
Confidence 457889998876553 57889999999999999999999999999999999999999999998877666678999999
Q ss_pred CCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
|--||.- |+++||..|.+.. +| ......+.+..++..|||..+.+++| .+|||
T Consensus 79 EnNLFaHLtV~qNigLGl~P~------Lk----------L~a~~r~~v~~aa~~vGl~~~~~RLP----------~~LSG 132 (231)
T COG3840 79 ENNLFAHLTVAQNIGLGLSPG------LK----------LNAEQREKVEAAAAQVGLAGFLKRLP----------GELSG 132 (231)
T ss_pred ccccchhhhhhhhhcccCCcc------cc----------cCHHHHHHHHHHHHHhChhhHhhhCc----------cccCc
Confidence 9999965 9999998876531 00 00112344778899999998888886 46899
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH----HH
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR----LA 1334 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~----~~ 1334 (1374)
|||||+|+ ||+|+|.-.||+||||-||||+.....|.. ++
T Consensus 133 GqRQRvAL------------------------------------ARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~ 176 (231)
T COG3840 133 GQRQRVAL------------------------------------ARCLVREQPILLLDEPFSALDPALRAEMLALVSQLC 176 (231)
T ss_pred hHHHHHHH------------------------------------HHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHH
Confidence 99999999 999999999999999999999998766544 44
Q ss_pred HhcCceEEEecCCC-CchhhccceEEEEcCCCCe
Q 000647 1335 KDMGITFVTSSQRP-ALIPFHSLELRLIDGEGNW 1367 (1374)
Q Consensus 1335 ~~~~~TvI~IaHRl-~~i~~~~~~l~l~~g~g~~ 1367 (1374)
.+.+.|+++|+|.+ +..+..++.+.+.+|.=.|
T Consensus 177 ~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~ 210 (231)
T COG3840 177 DERKMTLLMVTHHPEDAARIADRVVFLDNGRIAA 210 (231)
T ss_pred HhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEe
Confidence 56899999999999 6678889999997776555
No 437
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.8e-32 Score=311.10 Aligned_cols=199 Identities=27% Similarity=0.371 Sum_probs=161.5
Q ss_pred CcEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCC--CcCCccEEEeCCCCc------cccc-
Q 000647 443 NYIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGL--WPLVSGHIAKPGVGS------DLNK- 513 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl--~~~~~G~I~~~g~~~------~~~~- 513 (1374)
..++++|+++.|+ ++.+|+|+||++++||+++|+||||||||||+++|+|+ ++|++|+|.++|.+. ..++
T Consensus 6 ~~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 6 PILEIKNLHASVN-ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred ceEEEEeEEEEeC-CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 3699999999986 45799999999999999999999999999999999998 689999999998541 1122
Q ss_pred cEEEEecCCCCCcC-CHHHHhcCCCCCCc---ccCCC----CHHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhHH
Q 000647 514 EIFYVPQRPYTAVG-TLRDQLIYPLTSDQ---EVEPL----THGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQ 584 (1374)
Q Consensus 514 ~i~~v~Q~p~l~~~-Tv~eni~~~~~~~~---~~~~~----~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGqk 584 (1374)
.++|+||+|.++.+ |+.+|+.+...... ..... ..+++.++++.+++. ...++.+ ...||||||
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-------~~~LSgG~~ 157 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNV-------NEGFSGGEK 157 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhcccc-------ccCCCHHHH
Confidence 48899999988765 88999875421100 00001 123567789999987 3555544 125999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhh--ccEEEEecC
Q 000647 585 QRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAF--HDVVLSLDG 649 (1374)
Q Consensus 585 QRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~--~d~il~l~~ 649 (1374)
||++||||++++|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+.. +|+++++++
T Consensus 158 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~ 227 (252)
T CHL00131 158 KRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQN 227 (252)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeC
Confidence 999999999999999999999999999999999988764 48999999999998864 799999975
No 438
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.4e-33 Score=314.12 Aligned_cols=210 Identities=20% Similarity=0.262 Sum_probs=165.3
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc---CCcccEEE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 1176 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~---~~r~~i~~ 1176 (1374)
|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..+.+++|
T Consensus 3 i~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (242)
T TIGR03411 3 LYLEGLSVSFDG-FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGR 81 (242)
T ss_pred EEEEeeEEEcCC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeE
Confidence 789999999975 57999999999999999999999999999999999999999999999999886552 23457999
Q ss_pred ecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
+||+|.+|.+ |++||+.++...... .. ....+. .....++.+.++++.+++.+.... ....
T Consensus 82 ~~q~~~~~~~~tv~~nl~~~~~~~~~-~~-~~~~~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~ 143 (242)
T TIGR03411 82 KFQKPTVFENLTVFENLELALPRDKS-VF-ASLFFR------LSAEEKDRIEEVLETIGLADEADR----------LAGL 143 (242)
T ss_pred eccccccCCCCCHHHHHHHhhhcccc-cc-cccccc------cHHHHHHHHHHHHHHcCCchhhcC----------Chhh
Confidence 9999999987 999999865321000 00 000000 000113346677777776543322 1357
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||||||||++| |||++++|+++||||||++||.++.+.+.++++
T Consensus 144 LS~Ge~qrv~l------------------------------------aral~~~p~~lllDEPt~~LD~~~~~~l~~~l~ 187 (242)
T TIGR03411 144 LSHGQKQWLEI------------------------------------GMLLMQDPKLLLLDEPVAGMTDEETEKTAELLK 187 (242)
T ss_pred CCHHHHHHHHH------------------------------------HHHHhcCCCEEEecCCccCCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999988877665
Q ss_pred h--cCceEEEecCCCCchh-hccceEEEEcCC
Q 000647 1336 D--MGITFVTSSQRPALIP-FHSLELRLIDGE 1364 (1374)
Q Consensus 1336 ~--~~~TvI~IaHRl~~i~-~~~~~l~l~~g~ 1364 (1374)
+ .++|+|.|+|+++.+. +.|+++.|.+|+
T Consensus 188 ~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 219 (242)
T TIGR03411 188 SLAGKHSVVVVEHDMEFVRSIADKVTVLHQGS 219 (242)
T ss_pred HHhcCCEEEEEECCHHHHHHhCCEEEEEECCe
Confidence 4 3789999999998775 689999996654
No 439
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.7e-33 Score=311.11 Aligned_cols=203 Identities=26% Similarity=0.344 Sum_probs=165.8
Q ss_pred EEEeeeEEeCCCc---ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCc
Q 000647 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSG 1171 (1374)
Q Consensus 1100 I~f~~V~~~yp~~---~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r 1171 (1374)
|+|+||++.|+.. +.+++|+||++++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++.... ..+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 7899999988652 67999999999999999999999999999999999999999999999999887542 235
Q ss_pred ccEEEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1172 CGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1172 ~~i~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
++++++||+|.+|. .|+.+|+.++....+. . ......+.+.++++.+++.+..+..
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~-~--------------~~~~~~~~~~~~l~~~~l~~~~~~~-------- 138 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPN-L--------------SYQEARERARAMLEAVGLGDHLDYY-------- 138 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccC-C--------------CHHHHHHHHHHHHHHcCChhhhhcC--------
Confidence 68999999999987 6999999754210000 0 0000122356677888876555443
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
...||+|||||++| |||++++|+++||||||++||+++.+.+
T Consensus 139 --~~~lS~G~~qrv~l------------------------------------aral~~~p~illlDEP~~~LD~~~~~~l 180 (220)
T TIGR02982 139 --PHNLSGGQKQRVAI------------------------------------ARALVHRPKLVLADEPTAALDSKSGRDV 180 (220)
T ss_pred --hhhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCCcCCHHHHHHH
Confidence 35699999999999 9999999999999999999999998877
Q ss_pred HHHHHh----cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1331 YRLAKD----MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1331 ~~~~~~----~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
.+.+++ .++|+|+|+|+++.+.+.|+++.|.+|
T Consensus 181 ~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g 217 (220)
T TIGR02982 181 VELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDG 217 (220)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECC
Confidence 765542 489999999999989999999999655
No 440
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=100.00 E-value=1.1e-32 Score=310.06 Aligned_cols=182 Identities=26% Similarity=0.320 Sum_probs=153.2
Q ss_pred EcCCCCeeeeeeeEEEe-----CCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCCC-Cc
Q 000647 453 VTPTGNVLVENLTLKVE-----PGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYT-AV 526 (1374)
Q Consensus 453 ~~~~~~~~l~~isl~i~-----~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~l-~~ 526 (1374)
.||+....++|++|+++ +||+++|+||||||||||+++|+|+++|++|+|.++|. +|+|+||++.. +.
T Consensus 2 ~y~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~NGsGKSTLlk~L~G~~~p~~G~i~~~g~------~i~~~~q~~~~~~~ 75 (246)
T cd03237 2 TYPTMKKTLGEFTLEVEGGSISESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDIEIELD------TVSYKPQYIKADYE 75 (246)
T ss_pred CCcccccccCcEEEEEecCCcCCCCEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCc------eEEEecccccCCCC
Confidence 46665667788888886 79999999999999999999999999999999999873 69999999874 56
Q ss_pred CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCC
Q 000647 527 GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECT 606 (1374)
Q Consensus 527 ~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEpt 606 (1374)
.|++||+.+...... .......++++.+++.+..++.+ .+||||||||++|||||+.+|+++||||||
T Consensus 76 ~tv~e~l~~~~~~~~----~~~~~~~~~l~~l~l~~~~~~~~--------~~LSgGe~qrv~iaraL~~~p~llllDEPt 143 (246)
T cd03237 76 GTVRDLLSSITKDFY----THPYFKTEIAKPLQIEQILDREV--------PELSGGELQRVAIAACLSKDADIYLLDEPS 143 (246)
T ss_pred CCHHHHHHHHhhhcc----ccHHHHHHHHHHcCCHHHhhCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 899999975422110 11234567899999988777755 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecCCCc
Q 000647 607 SAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDGEGE 652 (1374)
Q Consensus 607 saLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~~g~ 652 (1374)
++||+.+...+.+.+++ .++|+|+|||+++.+. .+|++++++++.+
T Consensus 144 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsHd~~~~~~~~d~i~~l~~~~~ 194 (246)
T cd03237 144 AYLDVEQRLMASKVIRRFAENNEKTAFVVEHDIIMIDYLADRLIVFEGEPS 194 (246)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEcCCCe
Confidence 99999999998887764 3899999999999886 6999999987543
No 441
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=4.5e-33 Score=314.93 Aligned_cols=207 Identities=23% Similarity=0.256 Sum_probs=163.8
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCC-----CCeEecCCCccccc----cCC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVV-----SGSLTKPSQHIDEE----AGS 1170 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~-----~G~I~idg~dI~~~----~~~ 1170 (1374)
|+++||++.|++ ..+++|+||+|++||.++|+|+||||||||+++|.|+++|. +|+|.++|.++... ...
T Consensus 2 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~ 80 (247)
T TIGR00972 2 IEIENLNLFYGE-KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVEL 80 (247)
T ss_pred EEEEEEEEEECC-eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHH
Confidence 789999999875 46999999999999999999999999999999999999998 99999999988652 234
Q ss_pred cccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1171 GCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1171 r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
+++++||||+|.+|+.|++||+.++.... +.. .....++.+.++++.+++...+... ++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~e~l~~~~~~~----------~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~---~~~-- 140 (247)
T TIGR00972 81 RRRVGMVFQKPNPFPMSIYDNIAYGPRLH----------GIK-----DKKELDEIVEESLKKAALWDEVKDR---LHD-- 140 (247)
T ss_pred HhheEEEecCcccCCCCHHHHHHhHHHhc----------CCC-----CHHHHHHHHHHHHHHcCCCcchhhH---hhC--
Confidence 66899999999999999999997542100 000 0001123456678888875322110 111
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
....||||||||++| ||||+++|+++||||||++||.++.+.+
T Consensus 141 -~~~~LSgG~~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l 183 (247)
T TIGR00972 141 -SALGLSGGQQQRLCI------------------------------------ARALAVEPEVLLLDEPTSALDPIATGKI 183 (247)
T ss_pred -CcccCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHH
Confidence 245799999999999 9999999999999999999999999888
Q ss_pred HHHHHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1331 YRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1331 ~~~~~~--~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.+++++ .++|+|+|+|+++.+ .+.|+++.|.+|+
T Consensus 184 ~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 220 (247)
T TIGR00972 184 EELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGE 220 (247)
T ss_pred HHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCE
Confidence 776653 358999999999755 6789999996654
No 442
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-33 Score=322.98 Aligned_cols=200 Identities=19% Similarity=0.207 Sum_probs=162.5
Q ss_pred EEEeeeEEeCCCc----ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccc---------
Q 000647 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--------- 1166 (1374)
Q Consensus 1100 I~f~~V~~~yp~~----~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~--------- 1166 (1374)
|+++||++.|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 7899999999753 369999999999999999999999999999999999999999999999876531
Q ss_pred -----------------ccCCcccEEEecCCC--CCCCcchHHHhccCCC---hhHHHHHHHhhccCCCcccccCCCChH
Q 000647 1167 -----------------EAGSGCGIFYVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDS 1224 (1374)
Q Consensus 1167 -----------------~~~~r~~i~~VpQ~P--~Lf~GTlR~Nl~yp~~---~~e~~~~~~~~~~~~~~~~~~~~~~d~ 1224 (1374)
....|.+|+||||+| .+|..|++|||.++.. .+.++ .++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~-------------------~~~ 143 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEE-------------------AKK 143 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHH-------------------HHH
Confidence 123456799999987 6888899999986531 11110 123
Q ss_pred HHHHHHHhCCCc-hhhhhhccCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCccccc
Q 000647 1225 YLKTILEGVRLS-YLLEREEVGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKA 1303 (1374)
Q Consensus 1225 ~l~~~L~~v~L~-~~v~~~~~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 1303 (1374)
.+.++++.++|. ++.++. ...||||||||++| |
T Consensus 144 ~~~~~l~~~gL~~~~~~~~----------~~~LSgGqkqrval------------------------------------A 177 (305)
T PRK13651 144 RAAKYIELVGLDESYLQRS----------PFELSGGQKRRVAL------------------------------------A 177 (305)
T ss_pred HHHHHHHHcCCChhhhhCC----------hhhCCHHHHHHHHH------------------------------------H
Confidence 456778888874 333322 35799999999999 9
Q ss_pred ccccccCcEEEeeccCCCCCHHHHHHHHHHHH---hcCceEEEecCCCCc-hhhccceEEEEcCC
Q 000647 1304 RLFFHKPKFGILDECTNATSVDVEEQLYRLAK---DMGITFVTSSQRPAL-IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1304 Rallr~PkillLDEaTSaLD~~~e~~l~~~~~---~~~~TvI~IaHRl~~-i~~~~~~l~l~~g~ 1364 (1374)
|||+.+|++|||||||++||.+..+.+.++++ +.|+|+|+|+|+++. ..+.|+++.+.+|+
T Consensus 178 ~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G~ 242 (305)
T PRK13651 178 GILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDGK 242 (305)
T ss_pred HHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999887776554 358999999999964 57899999997653
No 443
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.2e-33 Score=308.04 Aligned_cols=198 Identities=20% Similarity=0.223 Sum_probs=161.9
Q ss_pred EEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecCC
Q 000647 1101 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQR 1180 (1374)
Q Consensus 1101 ~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ~ 1180 (1374)
+++||++.|+. +++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.++.+....++.++||||+
T Consensus 2 ~~~~l~~~~~~---~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 78 (213)
T TIGR01277 2 ALDKVRYEYEH---LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQE 78 (213)
T ss_pred eEEeeeEEeCC---cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEecc
Confidence 68999998863 568999999999999999999999999999999999999999999999887654456789999999
Q ss_pred CCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCChh
Q 000647 1181 PYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLG 1259 (1374)
Q Consensus 1181 P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSgG 1259 (1374)
|.+|.+ |++||+.++..... . .....++++.++++.+++.+...+. ...||+|
T Consensus 79 ~~~~~~~t~~en~~~~~~~~~---------~-------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~G 132 (213)
T TIGR01277 79 NNLFAHLTVRQNIGLGLHPGL---------K-------LNAEQQEKVVDAAQQVGIADYLDRL----------PEQLSGG 132 (213)
T ss_pred CccCCCCcHHHHHHhHhhccC---------C-------ccHHHHHHHHHHHHHcCcHHHhhCC----------cccCCHH
Confidence 999975 99999976531000 0 0001133466788888886555443 2469999
Q ss_pred hhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh---
Q 000647 1260 EQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD--- 1336 (1374)
Q Consensus 1260 QrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~--- 1336 (1374)
||||++| |||++++|+++||||||++||.++.+.+.+++++
T Consensus 133 ~~qrl~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~ 176 (213)
T TIGR01277 133 QRQRVAL------------------------------------ARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCS 176 (213)
T ss_pred HHHHHHH------------------------------------HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999999999999999999877775543
Q ss_pred -cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1337 -MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1337 -~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
.++|+|+|+|++..+ .+.|+++.+.+|
T Consensus 177 ~~~~tii~vsh~~~~~~~~~d~v~~l~~g 205 (213)
T TIGR01277 177 ERQRTLLMVTHHLSDARAIASQIAVVSQG 205 (213)
T ss_pred hcCCEEEEEeCCHHHHHhhcCeEEEEECC
Confidence 389999999999765 568899999654
No 444
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-32 Score=301.46 Aligned_cols=175 Identities=22% Similarity=0.309 Sum_probs=146.6
Q ss_pred cEEEeeeEEEcCC---CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCc---CCccEEEeCCCC-----cccc
Q 000647 444 YIEFSGVKVVTPT---GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWP---LVSGHIAKPGVG-----SDLN 512 (1374)
Q Consensus 444 ~i~~~~v~~~~~~---~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~---~~~G~I~~~g~~-----~~~~ 512 (1374)
.+.++||+|.||. ++++++|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.+ ...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~ 82 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYP 82 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhc
Confidence 4789999999985 4679999999999999999999999999999999999999 899999999864 1345
Q ss_pred ccEEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHH
Q 000647 513 KEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMAR 591 (1374)
Q Consensus 513 ~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalAR 591 (1374)
+.++|+||++.++. .|++||+.++... . .++. ...||||||||++|||
T Consensus 83 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~----------------~-------~~~~--------~~~LS~Ge~qrl~lar 131 (202)
T cd03233 83 GEIIYVSEEDVHFPTLTVRETLDFALRC----------------K-------GNEF--------VRGISGGERKRVSIAE 131 (202)
T ss_pred ceEEEEecccccCCCCcHHHHHhhhhhh----------------c-------cccc--------hhhCCHHHHHHHHHHH
Confidence 67999999998776 5999999764210 0 1222 2579999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---c-CCEEEEEc-cChhh-HhhccEEEEecC
Q 000647 592 LFYHKPKFAILDECTSAVTTDMEERFCAKVRA---M-GTSCITIS-HRPAL-VAFHDVVLSLDG 649 (1374)
Q Consensus 592 al~~~p~illLDEptsaLD~~~~~~i~~~l~~---~-~~TiI~vt-H~~~~-~~~~d~il~l~~ 649 (1374)
|++++|+++||||||++||+++++.+++.+++ . +.|+|+++ |+.+. ...+|++++|++
T Consensus 132 al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 132 ALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred HHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 99999999999999999999999999888764 2 56666655 55554 468999999986
No 445
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=7.6e-33 Score=308.06 Aligned_cols=190 Identities=22% Similarity=0.277 Sum_probs=153.4
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCccccccEEEEecCCC-
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPY- 523 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~~~~~~i~~v~Q~p~- 523 (1374)
+.++|+++.|. ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +....+.+.
T Consensus 23 l~~~~~~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~------~~~~~~~~~~ 95 (224)
T cd03220 23 LGILGRKGEVG-EFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRV------SSLLGLGGGF 95 (224)
T ss_pred hhhhhhhhhcC-CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE------chhhcccccC
Confidence 66788888774 5789999999999999999999999999999999999999999999999853 111222222
Q ss_pred CCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000647 524 TAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILD 603 (1374)
Q Consensus 524 l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLD 603 (1374)
.+..|++||+.++............+++.++++.+++.+..++.+ ..||||||||++||||++++|+++|||
T Consensus 96 ~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LSgG~~qrv~laral~~~p~llllD 167 (224)
T cd03220 96 NPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFIDLPV--------KTYSSGMKARLAFAIATALEPDILLID 167 (224)
T ss_pred CCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh--------hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 345799999986532111001112235677888899988777654 589999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 604 ECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 604 EptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 168 EP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 217 (224)
T cd03220 168 EVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEK 217 (224)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999998887754 4789999999999875 7999999975
No 446
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5.5e-33 Score=316.05 Aligned_cols=208 Identities=19% Similarity=0.206 Sum_probs=165.9
Q ss_pred CCCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc---------
Q 000647 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--------- 1167 (1374)
Q Consensus 1097 ~g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--------- 1167 (1374)
.+.|+++||++.|++ +.+|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++...
T Consensus 3 ~~~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (257)
T PRK10619 3 ENKLNVIDLHKRYGE-HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKV 81 (257)
T ss_pred CccEEEeeeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccc
Confidence 467999999999975 5799999999999999999999999999999999999999999999999887531
Q ss_pred ------cCCcccEEEecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhh
Q 000647 1168 ------AGSGCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLE 1240 (1374)
Q Consensus 1168 ------~~~r~~i~~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~ 1240 (1374)
...+.+++||||+|.+|++ |++||+.++... ..+. .....++.+.++++.+++.....
T Consensus 82 ~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~---------~~~~------~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 82 ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQ---------VLGL------SKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHH---------hCCC------CHHHHHHHHHHHHHHcCCChhhh
Confidence 1335679999999999975 999999753200 0000 00001234566777777754421
Q ss_pred hhccCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCC
Q 000647 1241 REEVGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTN 1320 (1374)
Q Consensus 1241 ~~~~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTS 1320 (1374)
. .....||+|||||++| ||||+++|+++||||||+
T Consensus 147 ~---------~~~~~LS~G~~qrv~l------------------------------------aral~~~p~llllDEPt~ 181 (257)
T PRK10619 147 G---------KYPVHLSGGQQQRVSI------------------------------------ARALAMEPEVLLFDEPTS 181 (257)
T ss_pred h---------CCcccCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcc
Confidence 1 1246799999999999 999999999999999999
Q ss_pred CCCHHHHHHHHHHHHh---cCceEEEecCCCCchh-hccceEEEEcCCC
Q 000647 1321 ATSVDVEEQLYRLAKD---MGITFVTSSQRPALIP-FHSLELRLIDGEG 1365 (1374)
Q Consensus 1321 aLD~~~e~~l~~~~~~---~~~TvI~IaHRl~~i~-~~~~~l~l~~g~g 1365 (1374)
+||.++.+.+.+++++ .|+|+|+|+|+++.+. +.|+++.|.+|+-
T Consensus 182 ~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 182 ALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 9999999887776543 4899999999998776 5899999976653
No 447
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-33 Score=297.89 Aligned_cols=197 Identities=28% Similarity=0.400 Sum_probs=168.0
Q ss_pred cEEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC-cc------ccccEE
Q 000647 444 YIEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG-SD------LNKEIF 516 (1374)
Q Consensus 444 ~i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~-~~------~~~~i~ 516 (1374)
.++++++++.+ ++-.+++|+||++++||+++|+|||||||||++|+|.|+|+|++|+|.++|.+ .. .+..|+
T Consensus 4 lL~v~~l~k~F-GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 4 LLEVRGLSKRF-GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeeccceeec-CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 47889999988 57889999999999999999999999999999999999999999999999975 11 245688
Q ss_pred EEecCCCCCcC-CHHHHhcCCCCCCc------------ccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhH
Q 000647 517 YVPQRPYTAVG-TLRDQLIYPLTSDQ------------EVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGE 583 (1374)
Q Consensus 517 ~v~Q~p~l~~~-Tv~eni~~~~~~~~------------~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGq 583 (1374)
--+|.+-+|.+ ||.||+..+..... ..+....++..++|+.++|.+..++.. .+||+||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A--------~~LsyG~ 154 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPA--------GNLSYGQ 154 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchh--------hcCChhH
Confidence 88999998875 99999987632110 011223456778899999999888754 6899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 584 QQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 584 kQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
|+|+.|||||+.+|++|+||||.+||.+....++.+.+++ .|.|+++|.||+..+ ..||+|++|+.
T Consensus 155 qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~ 225 (250)
T COG0411 155 QRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNY 225 (250)
T ss_pred hHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccC
Confidence 9999999999999999999999999999998888887654 469999999999987 58999999985
No 448
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.7e-33 Score=314.80 Aligned_cols=204 Identities=21% Similarity=0.244 Sum_probs=162.3
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc----------c
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----------A 1168 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~----------~ 1168 (1374)
.|+++||++.|++ +.+++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... .
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (250)
T PRK11264 3 AIEVKNLVKKFHG-QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIR 81 (250)
T ss_pred cEEEeceEEEECC-eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHH
Confidence 3889999999975 4699999999999999999999999999999999999999999999999987642 1
Q ss_pred CCcccEEEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCc
Q 000647 1169 GSGCGIFYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 1247 (1374)
Q Consensus 1169 ~~r~~i~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gld 1247 (1374)
..|.+++||||+|.+|. .|++||+.++.... + .. ......+.+.++++.+++....+.
T Consensus 82 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~-------~--~~------~~~~~~~~~~~~l~~~gl~~~~~~------ 140 (250)
T PRK11264 82 QLRQHVGFVFQNFNLFPHRTVLENIIEGPVIV-------K--GE------PKEEATARARELLAKVGLAGKETS------ 140 (250)
T ss_pred HhhhhEEEEecCcccCCCCCHHHHHHHHHHHh-------c--CC------CHHHHHHHHHHHHHHcCCcchhhC------
Confidence 34567999999999886 69999997531000 0 00 000012235566777776433222
Q ss_pred cccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHH
Q 000647 1248 ANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVE 1327 (1374)
Q Consensus 1248 t~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e 1327 (1374)
....||||||||++| ||||+++|+++||||||++||+++.
T Consensus 141 ----~~~~LS~Gq~qrv~l------------------------------------a~al~~~p~lllLDEPt~~LD~~~~ 180 (250)
T PRK11264 141 ----YPRRLSGGQQQRVAI------------------------------------ARALAMRPEVILFDEPTSALDPELV 180 (250)
T ss_pred ----ChhhCChHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCccCCHHHH
Confidence 246799999999999 9999999999999999999999999
Q ss_pred HHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1328 EQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1328 ~~l~~~~~~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+.+.+.+++ .|.|+|+|+|++..+ ++.|+++.+.+|+
T Consensus 181 ~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 221 (250)
T PRK11264 181 GEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGR 221 (250)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 888775543 489999999999776 5689999996654
No 449
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=3.9e-33 Score=297.93 Aligned_cols=165 Identities=31% Similarity=0.481 Sum_probs=147.8
Q ss_pred EEEeeeEEeCCCc-ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEE
Q 000647 1100 ISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1374)
Q Consensus 1100 I~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~ 1176 (1374)
|+++|+++.|++. +++++++||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.+. ...+++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 5789999999863 5799999999999999999999999999999999999999999999999988765 245678999
Q ss_pred ecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCC
Q 000647 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1374)
Q Consensus 1177 VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~L 1256 (1374)
+||+|.+|++|++||+ |
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------------------------------L 97 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------------------------------L 97 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------------------------------c
Confidence 9999999888888764 5
Q ss_pred ChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh
Q 000647 1257 SLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD 1336 (1374)
Q Consensus 1257 SgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~ 1336 (1374)
|+|||||++| |||++++|+++||||||++||.++.+.+.+.+++
T Consensus 98 S~G~~qrv~l------------------------------------a~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~ 141 (173)
T cd03246 98 SGGQRQRLGL------------------------------------ARALYGNPRILVLDEPNSHLDVEGERALNQAIAA 141 (173)
T ss_pred CHHHHHHHHH------------------------------------HHHHhcCCCEEEEECCccccCHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999887765543
Q ss_pred ---cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1337 ---MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1337 ---~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
.|+|+|+++|++..+...|+++.+.+|
T Consensus 142 ~~~~~~tii~~sh~~~~~~~~d~v~~l~~G 171 (173)
T cd03246 142 LKAAGATRIVIAHRPETLASADRILVLEDG 171 (173)
T ss_pred HHhCCCEEEEEeCCHHHHHhCCEEEEEECC
Confidence 489999999999888888888888654
No 450
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-33 Score=315.58 Aligned_cols=210 Identities=20% Similarity=0.199 Sum_probs=165.7
Q ss_pred CCCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCC-----CCCCeEecCCCccccc----
Q 000647 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEE---- 1167 (1374)
Q Consensus 1097 ~g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~-----~~~G~I~idg~dI~~~---- 1167 (1374)
.+.|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++ |.+|+|.++|.++...
T Consensus 11 ~~~l~~~~l~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~ 89 (260)
T PRK10744 11 PSKIQVRNLNFYYGK-FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDI 89 (260)
T ss_pred CceEEEEEEEEEeCC-eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccch
Confidence 577999999999975 469999999999999999999999999999999999986 4799999999988532
Q ss_pred cCCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCc
Q 000647 1168 AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 1247 (1374)
Q Consensus 1168 ~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gld 1247 (1374)
..+|.+++|+||+|.+|+.|+++|+.++..... .. .....++.+.++++.+++...+... ++
T Consensus 90 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~---------~~------~~~~~~~~~~~~l~~~~l~~~~~~~---~~ 151 (260)
T PRK10744 90 ALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFE---------KL------SRAEMDERVEWALTKAALWNEVKDK---LH 151 (260)
T ss_pred HHHhcceEEEecCCccCcCcHHHHHhhhHhhcC---------CC------CHHHHHHHHHHHHHHcCCChhhHHH---Hh
Confidence 234678999999999999999999976421000 00 0000123456777777764322111 11
Q ss_pred cccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHH
Q 000647 1248 ANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVE 1327 (1374)
Q Consensus 1248 t~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e 1327 (1374)
.....||||||||++| ||||+++|+++||||||++||.++.
T Consensus 152 ---~~~~~LS~Gq~qrv~l------------------------------------aral~~~p~lllLDEPt~~LD~~~~ 192 (260)
T PRK10744 152 ---QSGYSLSGGQQQRLCI------------------------------------ARGIAIRPEVLLLDEPCSALDPIST 192 (260)
T ss_pred ---cCCCCCCHHHHHHHHH------------------------------------HHHHHCCCCEEEEcCCCccCCHHHH
Confidence 1246799999999999 9999999999999999999999999
Q ss_pred HHHHHHHHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1328 EQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1328 ~~l~~~~~~--~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+.+.+.+++ .+.|+|.|+|++..+ .+.|+++.+.+|+
T Consensus 193 ~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 232 (260)
T PRK10744 193 GRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGE 232 (260)
T ss_pred HHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 887776653 478999999999766 6789999996553
No 451
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-33 Score=320.85 Aligned_cols=200 Identities=22% Similarity=0.247 Sum_probs=161.5
Q ss_pred EEEeeeEEeCCCc----ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc------cC
Q 000647 1100 ISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------AG 1169 (1374)
Q Consensus 1100 I~f~~V~~~yp~~----~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~------~~ 1169 (1374)
|+++||++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ..
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 7899999999752 4799999999999999999999999999999999999999999999999988653 23
Q ss_pred CcccEEEecCCC--CCCCcchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCch-hhhhhc
Q 000647 1170 SGCGIFYVPQRP--YTCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY-LLEREE 1243 (1374)
Q Consensus 1170 ~r~~i~~VpQ~P--~Lf~GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~-~v~~~~ 1243 (1374)
+|++|+|+||+| .+|.+|+++|+.++... +.++ ..+.+.++++.++|.. ...+
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~-------------------~~~~~~~~l~~~~l~~~~~~~-- 141 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEE-------------------AEALAREKLALVGISESLFEK-- 141 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHH-------------------HHHHHHHHHHHcCCChhhhhC--
Confidence 456799999998 68889999999754210 0000 0122445666666642 2211
Q ss_pred cCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCC
Q 000647 1244 VGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATS 1323 (1374)
Q Consensus 1244 ~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD 1323 (1374)
....||||||||++| ||||+++|+++||||||++||
T Consensus 142 --------~~~~LSgG~~qrv~l------------------------------------a~al~~~p~lllLDEPt~~LD 177 (280)
T PRK13649 142 --------NPFELSGGQMRRVAI------------------------------------AGILAMEPKILVLDEPTAGLD 177 (280)
T ss_pred --------CcccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCC
Confidence 245799999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1324 VDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1324 ~~~e~~l~~~~~~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.++.+.+.+.+++ .|+|+|+|+|+++.+ .+.|+++.|.+|+
T Consensus 178 ~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~ 222 (280)
T PRK13649 178 PKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGK 222 (280)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCE
Confidence 9999887776543 489999999999866 6789999996553
No 452
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-33 Score=313.36 Aligned_cols=203 Identities=25% Similarity=0.305 Sum_probs=162.0
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccc--------ccCCc
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE--------EAGSG 1171 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~--------~~~~r 1171 (1374)
|+++||++.|++ +.+++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.. ....|
T Consensus 3 l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (242)
T PRK11124 3 IQLNGINCFYGA-HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELR 81 (242)
T ss_pred EEEEeeEEEECC-eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHH
Confidence 789999999865 579999999999999999999999999999999999999999999999998731 12345
Q ss_pred ccEEEecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1172 CGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1172 ~~i~~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
++++|+||+|.+|.+ |++||+.+.... ..+. ......+++.++++.+++...+.+.
T Consensus 82 ~~i~~~~q~~~~~~~~tv~e~i~~~~~~---------~~~~------~~~~~~~~~~~~l~~~gl~~~~~~~-------- 138 (242)
T PRK11124 82 RNVGMVFQQYNLWPHLTVQQNLIEAPCR---------VLGL------SKDQALARAEKLLERLRLKPYADRF-------- 138 (242)
T ss_pred hheEEEecCccccCCCcHHHHHHHHHHH---------HcCC------CHHHHHHHHHHHHHHcCChhhhhCC--------
Confidence 689999999999976 999999642100 0000 0000122355677777775444332
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
...||||||||++| |||++++|+++||||||++||.++.+.+
T Consensus 139 --~~~LS~G~~qrv~l------------------------------------aral~~~p~llilDEPt~~LD~~~~~~l 180 (242)
T PRK11124 139 --PLHLSGGQQQRVAI------------------------------------ARALMMEPQVLLFDEPTAALDPEITAQI 180 (242)
T ss_pred --hhhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCCCcCCHHHHHHH
Confidence 35799999999999 9999999999999999999999999887
Q ss_pred HHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1331 YRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1331 ~~~~~~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.+.+++ .|.|+|+|+|++..+ .+.|+++.+.+|+
T Consensus 181 ~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~ 218 (242)
T PRK11124 181 VSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGH 218 (242)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 776543 489999999999876 5688999996654
No 453
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.6e-33 Score=310.24 Aligned_cols=199 Identities=22% Similarity=0.291 Sum_probs=163.2
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc--CCcccEE
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GSGCGIF 1175 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~--~~r~~i~ 1175 (1374)
..|+++||++.|++ +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+ .++++++
T Consensus 6 ~~i~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 6 PLLQLQNVGYLAGD-AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred ceEEEeccEEeeCC-ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 35899999998864 56999999999999999999999999999999999999999999999999887652 3466899
Q ss_pred EecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCch-hhhhhccCCcccccccc
Q 000647 1176 YVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY-LLEREEVGWDANLNWED 1254 (1374)
Q Consensus 1176 ~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~-~v~~~~~Gldt~~~~g~ 1254 (1374)
|+||+|.+|+.|++||+.++... ... ...++.+.++++.+++.+ +..+ ...
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~----------~~~--------~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 136 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQI----------RNQ--------QPDPAIFLDDLERFALPDTILTK----------NIA 136 (225)
T ss_pred EEecccccccccHHHHHHhHHhh----------cCC--------ChHHHHHHHHHHHcCCChHHhcC----------Ccc
Confidence 99999999999999999764210 000 001233556777777742 2211 245
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
.||+|||||++| ||||+++|+++||||||++||..+.+.+.+.+
T Consensus 137 ~LS~G~~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l~~~l 180 (225)
T PRK10247 137 ELSGGEKQRISL------------------------------------IRNLQFMPKVLLLDEITSALDESNKHNVNEII 180 (225)
T ss_pred cCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 799999999999 99999999999999999999999988776654
Q ss_pred Hh----cCceEEEecCCCCchhhccceEEEE
Q 000647 1335 KD----MGITFVTSSQRPALIPFHSLELRLI 1361 (1374)
Q Consensus 1335 ~~----~~~TvI~IaHRl~~i~~~~~~l~l~ 1361 (1374)
++ .|.|+|+|+|+++.++..|+++.|.
T Consensus 181 ~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~ 211 (225)
T PRK10247 181 HRYVREQNIAVLWVTHDKDEINHADKVITLQ 211 (225)
T ss_pred HHHHHhcCCEEEEEECChHHHHhCCEEEEEe
Confidence 42 4899999999998888899999983
No 454
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=5.6e-33 Score=298.67 Aligned_cols=162 Identities=34% Similarity=0.491 Sum_probs=140.2
Q ss_pred EEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------cccccEEEEe
Q 000647 446 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIFYVP 519 (1374)
Q Consensus 446 ~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~~~~~i~~v~ 519 (1374)
+++|+++.|++ +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+. .+++.++|+|
T Consensus 1 ~~~~l~~~~~~-~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~~ 79 (180)
T cd03214 1 EVENLSVGYGG-RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYVP 79 (180)
T ss_pred CeeEEEEEECC-eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHHH
Confidence 46899999864 6799999999999999999999999999999999999999999999988531 1223455555
Q ss_pred cCCCCCcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCE
Q 000647 520 QRPYTAVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKF 599 (1374)
Q Consensus 520 Q~p~l~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~i 599 (1374)
| +++.+++.++.++.+ .+||||||||++||||++.+|++
T Consensus 80 q---------------------------------~l~~~gl~~~~~~~~--------~~LS~G~~qrl~laral~~~p~l 118 (180)
T cd03214 80 Q---------------------------------ALELLGLAHLADRPF--------NELSGGERQRVLLARALAQEPPI 118 (180)
T ss_pred H---------------------------------HHHHcCCHhHhcCCc--------ccCCHHHHHHHHHHHHHhcCCCE
Confidence 5 678888887776654 68999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHh---c-CCEEEEEccChhhH-hhccEEEEecC
Q 000647 600 AILDECTSAVTTDMEERFCAKVRA---M-GTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 600 llLDEptsaLD~~~~~~i~~~l~~---~-~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+||||||++||+++.+.+++.+++ . ++|+|++||+++.+ ..+|+++++++
T Consensus 119 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~ 173 (180)
T cd03214 119 LLLDEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKD 173 (180)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999887754 3 78999999999987 67999999975
No 455
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=6.4e-33 Score=311.54 Aligned_cols=202 Identities=24% Similarity=0.285 Sum_probs=165.3
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++|+++.|++ +.+|+|+||+|.+||.++|+||||||||||+++|.|+++|.+|+|.+||.++......+.+++|+||
T Consensus 1 i~i~~l~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q 79 (237)
T TIGR00968 1 IEIANISKRFGS-FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQ 79 (237)
T ss_pred CEEEEEEEEECC-eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEec
Confidence 578999999975 4699999999999999999999999999999999999999999999999988765445668999999
Q ss_pred CCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
+|.+|++ |++||+.+..... .. .....++++.++++.+++....++. ...||+
T Consensus 80 ~~~~~~~~t~~enl~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~lS~ 133 (237)
T TIGR00968 80 HYALFKHLTVRDNIAFGLEIR----------KH------PKAKIKARVEELLELVQLEGLGDRY----------PNQLSG 133 (237)
T ss_pred ChhhccCCcHHHHHHhHHHhc----------CC------CHHHHHHHHHHHHHHcCCHhHhhCC----------hhhCCH
Confidence 9999976 9999997542100 00 0001123456777877775544332 256999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| |||++++|+++||||||++||.++.+.+.+++++
T Consensus 134 G~~qrl~l------------------------------------aral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~ 177 (237)
T TIGR00968 134 GQRQRVAL------------------------------------ARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLH 177 (237)
T ss_pred HHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999888776543
Q ss_pred -c-CceEEEecCCCCc-hhhccceEEEEcCC
Q 000647 1337 -M-GITFVTSSQRPAL-IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1337 -~-~~TvI~IaHRl~~-i~~~~~~l~l~~g~ 1364 (1374)
. ++|+|+++|+++. .+..|+++.|.+|+
T Consensus 178 ~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~ 208 (237)
T TIGR00968 178 DEVHVTTVFVTHDQEEAMEVADRIVVMSNGK 208 (237)
T ss_pred HhcCCEEEEEeCCHHHHHhhcCEEEEEECCE
Confidence 3 8999999999986 56789999996554
No 456
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-33 Score=319.37 Aligned_cols=204 Identities=19% Similarity=0.221 Sum_probs=167.4
Q ss_pred CEEEeeeEEeCCC-----cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc---cCC
Q 000647 1099 SISFSKLDIITPS-----QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE---AGS 1170 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~-----~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~---~~~ 1170 (1374)
-|+++||++.|++ .+++|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++.+. ...
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 4899999999975 35799999999999999999999999999999999999999999999999988753 234
Q ss_pred cccEEEecCCCC--CCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcc
Q 000647 1171 GCGIFYVPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1374)
Q Consensus 1171 r~~i~~VpQ~P~--Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt 1248 (1374)
|++++||||+|. +|.-|+++|+.++.... +. .....++.+.++++.++|.++..+.
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~gL~~~~~~~------ 141 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENL----------GI------PPEEIRERVDESLKKVGMYEYRRHA------ 141 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhc----------CC------CHHHHHHHHHHHHHHCCCHhHhhCC------
Confidence 678999999994 67668999997652100 00 0001133467788888887665543
Q ss_pred ccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHH
Q 000647 1249 NLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEE 1328 (1374)
Q Consensus 1249 ~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~ 1328 (1374)
...||+|||||++| ||||+++|+++||||||++||+.+.+
T Consensus 142 ----~~~LS~G~~qrv~l------------------------------------aral~~~p~llllDEPt~gLD~~~~~ 181 (280)
T PRK13633 142 ----PHLLSGGQKQRVAI------------------------------------AGILAMRPECIIFDEPTAMLDPSGRR 181 (280)
T ss_pred ----cccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCCHHHHH
Confidence 35699999999999 99999999999999999999999998
Q ss_pred HHHHHHHh----cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1329 QLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1329 ~l~~~~~~----~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
.+.+.+++ .|+|+|+|+|+++.+...++++.|.+|+
T Consensus 182 ~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~ 221 (280)
T PRK13633 182 EVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGK 221 (280)
T ss_pred HHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCE
Confidence 88776543 4899999999998888899999996553
No 457
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-33 Score=321.10 Aligned_cols=205 Identities=18% Similarity=0.162 Sum_probs=161.8
Q ss_pred CCCEEEeeeEEeCCCc----ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccc------
Q 000647 1097 QDSISFSKLDIITPSQ----KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDE------ 1166 (1374)
Q Consensus 1097 ~g~I~f~~V~~~yp~~----~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~------ 1166 (1374)
.|.|+++||+++|++. .++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++..
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 5789999999999764 369999999999999999999999999999999999999999999999988742
Q ss_pred -ccCCcccEEEecCCC--CCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCc-hhhhhh
Q 000647 1167 -EAGSGCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLERE 1242 (1374)
Q Consensus 1167 -~~~~r~~i~~VpQ~P--~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~-~~v~~~ 1242 (1374)
...+|++|+||||+| .+|.+|+++|+.++.... +. ......+.+.++++.++|. .+..+
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~----------~~------~~~~~~~~~~~ll~~~~L~~~~~~~- 146 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL----------GE------NKQEAYKKVPELLKLVQLPEDYVKR- 146 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHHcCCChhHhcC-
Confidence 123466899999999 477889999997642100 00 0000012244566666652 22211
Q ss_pred ccCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCC
Q 000647 1243 EVGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNAT 1322 (1374)
Q Consensus 1243 ~~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaL 1322 (1374)
....||||||||++| ||||+++|++|||||||++|
T Consensus 147 ---------~~~~LS~Gq~qrv~l------------------------------------aral~~~p~lLlLDEPt~~L 181 (289)
T PRK13645 147 ---------SPFELSGGQKRRVAL------------------------------------AGIIAMDGNTLVLDEPTGGL 181 (289)
T ss_pred ---------ChhhCCHHHHHHHHH------------------------------------HHHHHhCCCEEEEeCCcccC
Confidence 246799999999999 99999999999999999999
Q ss_pred CHHHHHHHHHHHHh----cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1323 SVDVEEQLYRLAKD----MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1323 D~~~e~~l~~~~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
|.++.+.+.+++++ .|+|+|+|+|+++.+ ++.|+++.+.+|
T Consensus 182 D~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G 227 (289)
T PRK13645 182 DPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEG 227 (289)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 99999887765442 489999999999764 678999999655
No 458
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-33 Score=315.29 Aligned_cols=209 Identities=21% Similarity=0.234 Sum_probs=165.4
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCC-----CCCeEecCCCccccc----c
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEE----A 1168 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~-----~~G~I~idg~dI~~~----~ 1168 (1374)
..|+++||++.|++ +.+++|+||+|++||.++|+|+||||||||+++|.|+++| .+|+|.++|.++... .
T Consensus 6 ~~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 6 AIIETENLNLFYTD-FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred ceEEEeeeEEEeCC-ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 46999999999865 5699999999999999999999999999999999999997 489999999987532 2
Q ss_pred CCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcc
Q 000647 1169 GSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1374)
Q Consensus 1169 ~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt 1248 (1374)
..|++++||||+|.+|..|++|||.++.... +.. .....++.+.++++.+++...+. +.+++
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~----------~~~-----~~~~~~~~~~~~l~~~~l~~~l~---~~~~~ 146 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIH----------GTK-----DKKKLDEIVEQSLKKSALWNEVK---DKLNT 146 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhc----------CCC-----CHHHHHHHHHHHHHHhCCchhhH---HHHhC
Confidence 3466899999999999999999997652100 000 00001234566777777643221 23343
Q ss_pred ccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHH
Q 000647 1249 NLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEE 1328 (1374)
Q Consensus 1249 ~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~ 1328 (1374)
. ...||||||||++| ||||+++|+++||||||++||..+.+
T Consensus 147 ~---~~~LSgG~~qrv~l------------------------------------aral~~~p~lllLDEPt~~LD~~~~~ 187 (254)
T PRK14273 147 N---ALSLSGGQQQRLCI------------------------------------ARTLAIEPNVILMDEPTSALDPISTG 187 (254)
T ss_pred C---cccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCCcccCHHHHH
Confidence 3 46799999999999 99999999999999999999999998
Q ss_pred HHHHHHHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1329 QLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1329 ~l~~~~~~--~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.+.+++++ .++|+|+|+|+++.+ .+.|+++.|.+|+
T Consensus 188 ~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~ 226 (254)
T PRK14273 188 KIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGC 226 (254)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 87776553 478999999999875 6689999996554
No 459
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=4.3e-33 Score=306.40 Aligned_cols=195 Identities=21% Similarity=0.218 Sum_probs=156.8
Q ss_pred EeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc------CCcccEE
Q 000647 1102 FSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA------GSGCGIF 1175 (1374)
Q Consensus 1102 f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~------~~r~~i~ 1175 (1374)
++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.+++.+. ..+++++
T Consensus 1 i~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~ 79 (206)
T TIGR03608 1 LKNISKKFGD-KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLG 79 (206)
T ss_pred CcceEEEECC-EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCee
Confidence 3689998875 57999999999999999999999999999999999999999999999999876431 2456799
Q ss_pred EecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccccc
Q 000647 1176 YVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1374)
Q Consensus 1176 ~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~ 1254 (1374)
++||+|.+|. .|++||+.++.... +. .....++++.++++.+++.+..++. ..
T Consensus 80 ~~~q~~~~~~~~t~~e~~~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~ 133 (206)
T TIGR03608 80 YLFQNFALIENETVEENLDLGLKYK----------KL------SKKEKREKKKEALEKVGLNLKLKQK----------IY 133 (206)
T ss_pred EEecchhhccCCcHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCchhhhcCC----------hh
Confidence 9999999987 69999997532100 00 0001123456778877775443322 35
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
.||+|||||++| ||||+++|+++||||||++||.++.+.+.+++
T Consensus 134 ~lS~G~~qr~~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l~~~l 177 (206)
T TIGR03608 134 ELSGGEQQRVAL------------------------------------ARAILKDPPLILADEPTGSLDPKNRDEVLDLL 177 (206)
T ss_pred hCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHH
Confidence 699999999999 99999999999999999999999998887766
Q ss_pred Hh---cCceEEEecCCCCchhhccceEE
Q 000647 1335 KD---MGITFVTSSQRPALIPFHSLELR 1359 (1374)
Q Consensus 1335 ~~---~~~TvI~IaHRl~~i~~~~~~l~ 1359 (1374)
++ .|.|+|+|+|++..+...++++.
T Consensus 178 ~~~~~~~~tii~~sh~~~~~~~~d~i~~ 205 (206)
T TIGR03608 178 LELNDEGKTIIIVTHDPEVAKQADRVIE 205 (206)
T ss_pred HHHHhcCCEEEEEeCCHHHHhhcCEEEe
Confidence 53 48999999999988877777654
No 460
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8.5e-33 Score=321.40 Aligned_cols=199 Identities=23% Similarity=0.292 Sum_probs=161.3
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEEEe
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYV 1177 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~~V 1177 (1374)
.|+++||++.|++ ..+|+|+||+|++||.+||+||||||||||+++|.|+++|.+|+|.++|.++... ...|.+++||
T Consensus 4 ~i~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v 82 (303)
T TIGR01288 4 AIDLVGVSKSYGD-KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVV 82 (303)
T ss_pred EEEEEeEEEEeCC-eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEE
Confidence 5899999999865 5699999999999999999999999999999999999999999999999987644 2346789999
Q ss_pred cCCCCCCC-cchHHHhccCCC---hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1178 PQRPYTCL-GTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1178 pQ~P~Lf~-GTlR~Nl~yp~~---~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
||+|.++. .|++||+.+... .++.+ ..+.+.++++.++|.+..++ . .
T Consensus 83 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~-------------------~~~~~~~ll~~~~l~~~~~~-------~---~ 133 (303)
T TIGR01288 83 PQFDNLDPEFTVRENLLVFGRYFGMSTRE-------------------IEAVIPSLLEFARLESKADV-------R---V 133 (303)
T ss_pred eccccCCcCCcHHHHHHHHHHHcCCCHHH-------------------HHHHHHHHHHHCCChhHhcC-------c---h
Confidence 99999885 699999964210 00000 01234456777776543322 2 3
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||||||||++| ||||+++|+++||||||++||+.+.+.+.++
T Consensus 134 ~~LSgG~~qrv~l------------------------------------a~al~~~p~lllLDEPt~gLD~~~~~~l~~~ 177 (303)
T TIGR01288 134 ALLSGGMKRRLTL------------------------------------ARALINDPQLLILDEPTTGLDPHARHLIWER 177 (303)
T ss_pred hhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHH
Confidence 5699999999999 9999999999999999999999999887776
Q ss_pred HHh---cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1334 AKD---MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1334 ~~~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
+++ .|+|+|.++|+++.+ ++.|+++.|.+|
T Consensus 178 l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G 211 (303)
T TIGR01288 178 LRSLLARGKTILLTTHFMEEAERLCDRLCVLESG 211 (303)
T ss_pred HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 543 489999999999766 578999988654
No 461
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-29 Score=281.10 Aligned_cols=237 Identities=20% Similarity=0.218 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCCCCCCccCCCCcEEEeeeEEEcCCCCeeeeeeeEEEeC
Q 000647 391 QSLGTLSISSRRLNRLSGYADRIHELMVISRELSIEDKSPQRNGSRNYFSEANYIEFSGVKVVTPTGNVLVENLTLKVEP 470 (1374)
Q Consensus 391 ~~l~~~~~~~~~l~~~~~~~~Ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~l~~isl~i~~ 470 (1374)
.++..++.....+.....++++|.++-..+.... -... ...++-..++++||.|.|++...-+..+|++|++
T Consensus 277 ~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~--~~~~------q~~p~~~~lelrnvrfay~~~~FhvgPiNl~ikr 348 (546)
T COG4615 277 TPLLSAVGILPTLLTAQVAFNKIAKLELAPYKAD--FPRP------QAFPDWKTLELRNVRFAYQDNAFHVGPINLTIKR 348 (546)
T ss_pred hHHHHHHhhhhHHHHHHHHHHHHHHhhcCCcccc--CCCC------CcCCcccceeeeeeeeccCcccceecceeeEEec
Confidence 3444444455566777888899987644222111 0111 1122234699999999998776778999999999
Q ss_pred CCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCC------ccccccEEEEecCCCCCcCCHHHHhcCCCCCCcccC
Q 000647 471 GSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVG------SDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEVE 544 (1374)
Q Consensus 471 Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~------~~~~~~i~~v~Q~p~l~~~Tv~eni~~~~~~~~~~~ 544 (1374)
||++.|+|.|||||||++++|.|++.|++|+|.+||.+ +++|+-++-|+-|-|+|..+ .-+. .
T Consensus 349 GelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~l-----l~~e------~ 417 (546)
T COG4615 349 GELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQL-----LGPE------G 417 (546)
T ss_pred CcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhh-----hCCc------c
Confidence 99999999999999999999999999999999999964 34666677777777776532 2221 1
Q ss_pred CCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHH----
Q 000647 545 PLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAK---- 620 (1374)
Q Consensus 545 ~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~---- 620 (1374)
..+.+.+...|+++.+.+...-.. +.- -.-.||-|||+|+|+--|++-+.||+++||=-+--||.-++..|+.
T Consensus 418 ~as~q~i~~~LqrLel~~ktsl~d-~~f--s~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~ 494 (546)
T COG4615 418 KASPQLIEKWLQRLELAHKTSLND-GRF--SNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPL 494 (546)
T ss_pred CCChHHHHHHHHHHHHhhhhcccC-Ccc--cccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHH
Confidence 145667778888877766543221 100 0146999999999999999999999999999999999999998875
Q ss_pred HHhcCCEEEEEccChhhHhhccEEEEecC
Q 000647 621 VRAMGTSCITISHRPALVAFHDVVLSLDG 649 (1374)
Q Consensus 621 l~~~~~TiI~vtH~~~~~~~~d~il~l~~ 649 (1374)
+++.|+||+.||||-.....+||++.+.+
T Consensus 495 LK~qGKTI~aIsHDd~YF~~ADrll~~~~ 523 (546)
T COG4615 495 LKEQGKTIFAISHDDHYFIHADRLLEMRN 523 (546)
T ss_pred HHHhCCeEEEEecCchhhhhHHHHHHHhc
Confidence 46789999999999999999999999975
No 462
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-33 Score=311.13 Aligned_cols=202 Identities=21% Similarity=0.274 Sum_probs=164.9
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++|+++.|++ +.+++|+||+|+|||.++|+||||||||||+++|.|+++|.+|+|+++|+++......+..++++||
T Consensus 1 l~~~~l~~~~~~-~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (232)
T cd03300 1 IELENVSKFYGG-FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQ 79 (232)
T ss_pred CEEEeEEEEeCC-eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEec
Confidence 478999999975 5799999999999999999999999999999999999999999999999988766434567999999
Q ss_pred CCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
+|.+|.+ |+++|+.++.... +. .....++++.++++.+++.+++.+. ...||+
T Consensus 80 ~~~~~~~~t~~~nl~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~lS~ 133 (232)
T cd03300 80 NYALFPHLTVFENIAFGLRLK----------KL------PKAEIKERVAEALDLVQLEGYANRK----------PSQLSG 133 (232)
T ss_pred ccccCCCCcHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCCchhhcCC----------hhhCCH
Confidence 9999976 9999997542100 00 0001123456677777776555443 256999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| |||++++|+++||||||++||+++.+.+++++++
T Consensus 134 G~~qrl~l------------------------------------aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~ 177 (232)
T cd03300 134 GQQQRVAI------------------------------------ARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQ 177 (232)
T ss_pred HHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999888776543
Q ss_pred --cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1337 --MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.|+|+|+++|++..+ ...|+++.|.+|.
T Consensus 178 ~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~ 208 (232)
T cd03300 178 KELGITFVFVTHDQEEALTMSDRIAVMNKGK 208 (232)
T ss_pred HHcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 389999999999865 5689999996553
No 463
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.3e-33 Score=312.66 Aligned_cols=199 Identities=25% Similarity=0.349 Sum_probs=157.2
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc---CCcccEEE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 1176 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~---~~r~~i~~ 1176 (1374)
|+++||++.|++ +++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..+++++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (230)
T TIGR03410 1 LEVSNLNVYYGQ-SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAY 79 (230)
T ss_pred CEEEeEEEEeCC-eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEE
Confidence 578999999975 57999999999999999999999999999999999999999999999999887652 23457999
Q ss_pred ecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCC-CchhhhhhccCCcccccccc
Q 000647 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVR-LSYLLEREEVGWDANLNWED 1254 (1374)
Q Consensus 1177 VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~-L~~~v~~~~~Gldt~~~~g~ 1254 (1374)
+||+|.+|.+ |+++|+.++..... . ...+...++++.++ +.+.. + ....
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~~----------~---------~~~~~~~~~l~~~~~l~~~~-------~---~~~~ 130 (230)
T TIGR03410 80 VPQGREIFPRLTVEENLLTGLAALP----------R---------RSRKIPDEIYELFPVLKEML-------G---RRGG 130 (230)
T ss_pred eccCCcccCCCcHHHHHHHHHHhcC----------c---------chHHHHHHHHHHHHhHHHHh-------h---CChh
Confidence 9999999987 99999976431100 0 00111233343332 11111 1 1245
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
.||||||||++| |||++++|+++||||||++||..+.+.+.+++
T Consensus 131 ~LS~G~~qrv~l------------------------------------a~al~~~p~illlDEPt~~LD~~~~~~l~~~l 174 (230)
T TIGR03410 131 DLSGGQQQQLAI------------------------------------ARALVTRPKLLLLDEPTEGIQPSIIKDIGRVI 174 (230)
T ss_pred hCCHHHHHHHHH------------------------------------HHHHhcCCCEEEecCCcccCCHHHHHHHHHHH
Confidence 799999999999 99999999999999999999999998877765
Q ss_pred Hh----cCceEEEecCCCCchh-hccceEEEEcCC
Q 000647 1335 KD----MGITFVTSSQRPALIP-FHSLELRLIDGE 1364 (1374)
Q Consensus 1335 ~~----~~~TvI~IaHRl~~i~-~~~~~l~l~~g~ 1364 (1374)
++ .++|+|.|+|+++.+. +.++++.+.+|+
T Consensus 175 ~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~ 209 (230)
T TIGR03410 175 RRLRAEGGMAILLVEQYLDFARELADRYYVMERGR 209 (230)
T ss_pred HHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 43 3899999999998776 689999996543
No 464
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.1e-33 Score=304.08 Aligned_cols=195 Identities=24% Similarity=0.298 Sum_probs=160.3
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEEEec
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 1178 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~~Vp 1178 (1374)
|+++|+++.|+. +.+++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...+++++++|
T Consensus 2 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~ 80 (204)
T PRK13538 2 LEARNLACERDE-RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLG 80 (204)
T ss_pred eEEEEEEEEECC-EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeC
Confidence 689999998865 5699999999999999999999999999999999999999999999999988755 34466799999
Q ss_pred CCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|+|.+++ .|++||+.++.... + ...++++.++++.+++.+..++. ...||
T Consensus 81 ~~~~~~~~~tv~e~l~~~~~~~----------~---------~~~~~~~~~~l~~~gl~~~~~~~----------~~~LS 131 (204)
T PRK13538 81 HQPGIKTELTALENLRFYQRLH----------G---------PGDDEALWEALAQVGLAGFEDVP----------VRQLS 131 (204)
T ss_pred CccccCcCCcHHHHHHHHHHhc----------C---------ccHHHHHHHHHHHcCCHHHhhCC----------hhhcC
Confidence 9998876 59999997542100 0 01234567788888886543321 35699
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh-
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD- 1336 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~- 1336 (1374)
+|||||++| |||++++|+++||||||++||.++.+.+.+++++
T Consensus 132 ~G~~qrl~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~ 175 (204)
T PRK13538 132 AGQQRRVAL------------------------------------ARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQH 175 (204)
T ss_pred HHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999888776543
Q ss_pred --cCceEEEecCCCCch-hhccceEEE
Q 000647 1337 --MGITFVTSSQRPALI-PFHSLELRL 1360 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~i-~~~~~~l~l 1360 (1374)
.+.|+|+|+|+++.+ .+..+++++
T Consensus 176 ~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 176 AEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred HHCCCEEEEEecChhhhccCCceEEec
Confidence 489999999999887 555555555
No 465
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.9e-33 Score=311.64 Aligned_cols=203 Identities=23% Similarity=0.308 Sum_probs=162.9
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc----cCCcccEE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----AGSGCGIF 1175 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~----~~~r~~i~ 1175 (1374)
|+++|+++.|++ +.+++|+||+|+|||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...+++++
T Consensus 2 l~~~~l~~~~~~-~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 80 (240)
T PRK09493 2 IEFKNVSKHFGP-TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG 80 (240)
T ss_pred EEEEeEEEEECC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceE
Confidence 689999998864 5799999999999999999999999999999999999999999999999988653 23466799
Q ss_pred EecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccccc
Q 000647 1176 YVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWED 1254 (1374)
Q Consensus 1176 ~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~ 1254 (1374)
|+||+|.+|. .|+++|+.++.... .+. .....++.+.++++.+++.+...+. ..
T Consensus 81 ~~~q~~~~~~~~tv~~~l~~~~~~~---------~~~------~~~~~~~~~~~~l~~~gl~~~~~~~----------~~ 135 (240)
T PRK09493 81 MVFQQFYLFPHLTALENVMFGPLRV---------RGA------SKEEAEKQARELLAKVGLAERAHHY----------PS 135 (240)
T ss_pred EEecccccCCCCcHHHHHHhHHHHh---------cCC------CHHHHHHHHHHHHHHcCChHHHhcC----------hh
Confidence 9999999886 59999997642100 000 0000123355677777765443332 35
Q ss_pred CCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH
Q 000647 1255 ILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA 1334 (1374)
Q Consensus 1255 ~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~ 1334 (1374)
.||+|||||++| |||++++|++++|||||++||.++.+.+.+++
T Consensus 136 ~LS~G~~qrv~l------------------------------------a~al~~~p~llllDEP~~~LD~~~~~~l~~~l 179 (240)
T PRK09493 136 ELSGGQQQRVAI------------------------------------ARALAVKPKLMLFDEPTSALDPELRHEVLKVM 179 (240)
T ss_pred hcCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHH
Confidence 799999999999 99999999999999999999999998887765
Q ss_pred Hh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1335 KD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1335 ~~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
++ .+.|+|+|+|++..+ .+.|+++.+.+|+
T Consensus 180 ~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 213 (240)
T PRK09493 180 QDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGR 213 (240)
T ss_pred HHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 43 489999999999877 4688888986553
No 466
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-33 Score=315.82 Aligned_cols=207 Identities=23% Similarity=0.284 Sum_probs=165.3
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEE
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFY 1176 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~ 1176 (1374)
.|+++||++.|++ +.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ..+++.++|
T Consensus 11 ~l~i~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 89 (265)
T PRK10575 11 TFALRNVSFRVPG-RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAY 89 (265)
T ss_pred eEEEeeEEEEECC-EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheEE
Confidence 5899999999975 5799999999999999999999999999999999999999999999999988654 244567999
Q ss_pred ecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
+||+|.++.+ |+++|+.++...... ..+. .....++.+.++++.+++.+.+.+. ...
T Consensus 90 v~q~~~~~~~~tv~e~l~~~~~~~~~------~~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~ 147 (265)
T PRK10575 90 LPQQLPAAEGMTVRELVAIGRYPWHG------ALGR------FGAADREKVEEAISLVGLKPLAHRL----------VDS 147 (265)
T ss_pred eccCCCCCCCccHHHHHHhCcccccc------cccC------CCHHHHHHHHHHHHHcCCHHHhcCC----------ccc
Confidence 9999887665 999999865320000 0000 0001134467788888875544332 246
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||||||||++| |||++.+|+++||||||++||.++.+.+.+.++
T Consensus 148 LSgG~~qrv~l------------------------------------aral~~~p~lllLDEPt~~LD~~~~~~~~~~l~ 191 (265)
T PRK10575 148 LSGGERQRAWI------------------------------------AMLVAQDSRCLLLDEPTSALDIAHQVDVLALVH 191 (265)
T ss_pred CCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999887766553
Q ss_pred h----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1336 D----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1336 ~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+ .|+|+|+|+|+++.+ ++.|+++.|.+|+
T Consensus 192 ~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 192 RLSQERGLTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 2 389999999999877 5788999996543
No 467
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-33 Score=318.67 Aligned_cols=201 Identities=22% Similarity=0.273 Sum_probs=165.7
Q ss_pred CEEEeeeEEeCCC--cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccE
Q 000647 1099 SISFSKLDIITPS--QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGI 1174 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~--~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i 1174 (1374)
-|+++||++.|+. .+++|+|+||+|++||.++|+|+||||||||+++|.|+++|.+|+|.++|.++... ...+.++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 4899999999975 35699999999999999999999999999999999999999999999999988754 2346689
Q ss_pred EEecCCC--CCCCcchHHHhccCCCh---hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccc
Q 000647 1175 FYVPQRP--YTCLGTLRDQIIYPLSR---EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1374)
Q Consensus 1175 ~~VpQ~P--~Lf~GTlR~Nl~yp~~~---~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~ 1249 (1374)
+||||+| .++..|+.+||.++... ..++ ..+.+.++++.++|.++..+.
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~-------------------~~~~~~~~l~~~~l~~~~~~~------- 137 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREE-------------------MIKRVDEALLAVNMLDFKTRE------- 137 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHH-------------------HHHHHHHHHHHCCCHhHhhCC-------
Confidence 9999999 36788999999765210 0000 012355677878876554332
Q ss_pred cccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHH
Q 000647 1250 LNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQ 1329 (1374)
Q Consensus 1250 ~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~ 1329 (1374)
...||||||||++| ||||+++|+++||||||++||+.+.+.
T Consensus 138 ---~~~LS~G~~qrv~l------------------------------------AraL~~~p~llllDEPt~~LD~~~~~~ 178 (277)
T PRK13642 138 ---PARLSGGQKQRVAV------------------------------------AGIIALRPEIIILDESTSMLDPTGRQE 178 (277)
T ss_pred ---cccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCCHHHHHH
Confidence 35699999999999 999999999999999999999999988
Q ss_pred HHHHHH----hcCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1330 LYRLAK----DMGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1330 l~~~~~----~~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
+.++++ +.|+|+|.|+|++..+...|+++.|.+|.
T Consensus 179 l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~ 217 (277)
T PRK13642 179 IMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGE 217 (277)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCE
Confidence 777653 23899999999998888899999996553
No 468
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-33 Score=314.69 Aligned_cols=208 Identities=18% Similarity=0.207 Sum_probs=163.6
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCC-----CCCCeEecCCCccccc----cC
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP-----VVSGSLTKPSQHIDEE----AG 1169 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~-----~~~G~I~idg~dI~~~----~~ 1169 (1374)
.|+++||+++|++ +.+|+|+||+|++||.++|+||||||||||+++|.|+++ |.+|+|.++|.++... ..
T Consensus 6 ~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 84 (253)
T PRK14242 6 KMEARGLSFFYGD-FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVE 84 (253)
T ss_pred EEEEeeeEEEECC-eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHH
Confidence 4899999999964 569999999999999999999999999999999999974 5899999999988642 23
Q ss_pred CcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccc
Q 000647 1170 SGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDAN 1249 (1374)
Q Consensus 1170 ~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~ 1249 (1374)
.|++++||||+|.+|.+|++||+.++.... +.. .....++++.++++.+++.+.+... ++
T Consensus 85 ~~~~i~~v~q~~~~~~~tv~enl~~~~~~~----------~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~---~~-- 144 (253)
T PRK14242 85 LRRRVGMVFQKPNPFPKSIFENVAYGLRVN----------GVK-----DKAYLAERVERSLRHAALWDEVKDR---LH-- 144 (253)
T ss_pred HhhcEEEEecCCCCCcCcHHHHHHHHHHHc----------CCC-----CHHHHHHHHHHHHHHcCCchhhhHH---hh--
Confidence 466899999999999999999997642100 000 0001123456677777775432211 11
Q ss_pred cccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHH
Q 000647 1250 LNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQ 1329 (1374)
Q Consensus 1250 ~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~ 1329 (1374)
.....||||||||++| ||||+++|+++||||||++||.++.+.
T Consensus 145 -~~~~~LSgGq~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~ 187 (253)
T PRK14242 145 -ESALGLSGGQQQRLCI------------------------------------ARALAVEPEVLLMDEPASALDPIATQK 187 (253)
T ss_pred -CCcccCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 1245799999999999 999999999999999999999999988
Q ss_pred HHHHHHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1330 LYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1330 l~~~~~~--~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+.+++++ .++|+|+|+|+++.+ ++.|+++.|.+|+
T Consensus 188 l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~ 225 (253)
T PRK14242 188 IEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGK 225 (253)
T ss_pred HHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCE
Confidence 8776653 478999999999776 6789999996543
No 469
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=348.23 Aligned_cols=199 Identities=28% Similarity=0.349 Sum_probs=166.4
Q ss_pred CcEEEeeeEEEcCC----------CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc---
Q 000647 443 NYIEFSGVKVVTPT----------GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS--- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~----------~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~--- 509 (1374)
..++++|+++.|+. ...+++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+.
T Consensus 312 ~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~ 391 (623)
T PRK10261 312 PILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTL 391 (623)
T ss_pred ceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcC
Confidence 47999999999862 24699999999999999999999999999999999999999999999998531
Q ss_pred ------cccccEEEEecCCC--CC-cCCHHHHhcCCCCCCccc-CCCCHHHHHHHHHHcCCh-hHHhcCCCCccccCCCC
Q 000647 510 ------DLNKEIFYVPQRPY--TA-VGTLRDQLIYPLTSDQEV-EPLTHGGMVELLKNVDLE-YLLDRYPPEKEINWGDE 578 (1374)
Q Consensus 510 ------~~~~~i~~v~Q~p~--l~-~~Tv~eni~~~~~~~~~~-~~~~~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~ 578 (1374)
.++++|+||||+|+ ++ ..|+.+|+.++....... .....+++.++++.++|. +..++.| .+
T Consensus 392 ~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~--------~~ 463 (623)
T PRK10261 392 SPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYP--------HE 463 (623)
T ss_pred CHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCc--------cc
Confidence 13567999999984 44 469999998653211100 011235677899999995 5677776 68
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 579 LSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 579 LSgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
||||||||++|||||+.+|+++||||||++||+.+...+++.+++ .|.|+|+||||++.+. .||+|++|++
T Consensus 464 LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~ 539 (623)
T PRK10261 464 FSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYL 539 (623)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999988743 4899999999999875 6999999975
No 470
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-33 Score=317.62 Aligned_cols=201 Identities=22% Similarity=0.201 Sum_probs=159.9
Q ss_pred EEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc--C----CcccE
Q 000647 1101 SFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--G----SGCGI 1174 (1374)
Q Consensus 1101 ~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~--~----~r~~i 1174 (1374)
.++||+..|. .+.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+ . .+.++
T Consensus 26 ~~~~~~~~~~-~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i 104 (269)
T cd03294 26 SKEEILKKTG-QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKI 104 (269)
T ss_pred hhhhhhhhcC-CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcE
Confidence 4567777664 356899999999999999999999999999999999999999999999999887652 1 23579
Q ss_pred EEecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1175 FYVPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1175 ~~VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
+||||+|.+|. .|++||+.++.... +. .....++++.++++.++|.+.+.+. .
T Consensus 105 ~~v~q~~~~~~~~tv~e~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~ 158 (269)
T cd03294 105 SMVFQSFALLPHRTVLENVAFGLEVQ----------GV------PRAEREERAAEALELVGLEGWEHKY----------P 158 (269)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHhc----------CC------CHHHHHHHHHHHHHHcCCHhHhhCC----------c
Confidence 99999999985 69999997642100 00 0000123456778888886555443 2
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||+|||||++| ||||+++|++|||||||++||..+.+.+.+.
T Consensus 159 ~~LS~Gq~qrv~l------------------------------------Aral~~~p~illLDEPt~~LD~~~~~~l~~~ 202 (269)
T cd03294 159 DELSGGMQQRVGL------------------------------------ARALAVDPDILLMDEAFSALDPLIRREMQDE 202 (269)
T ss_pred ccCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCCccCCHHHHHHHHHH
Confidence 4699999999999 9999999999999999999999999888776
Q ss_pred HHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1334 AKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1334 ~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+++ .|+|+|+++|+++.+ ++.|+++.|.+|+
T Consensus 203 l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~ 238 (269)
T cd03294 203 LLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGR 238 (269)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 542 389999999999765 6789999996543
No 471
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.1e-32 Score=320.03 Aligned_cols=203 Identities=22% Similarity=0.285 Sum_probs=163.9
Q ss_pred CCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEEE
Q 000647 1098 DSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFY 1176 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~~ 1176 (1374)
..|+++||++.|++ +.+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.|+... ...|.+|+|
T Consensus 6 ~~i~i~~l~k~~~~-~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~ 84 (306)
T PRK13537 6 APIDFRNVEKRYGD-KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGV 84 (306)
T ss_pred ceEEEEeEEEEECC-eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEE
Confidence 46999999999964 6799999999999999999999999999999999999999999999999998765 345678999
Q ss_pred ecCCCCCCC-cchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1177 VPQRPYTCL-GTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~-GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
|||+|.+|. .|++||+.|... .++.. .......+.++++.++|.+.. ++.+ ..
T Consensus 85 v~q~~~~~~~~tv~e~l~~~~~----------~~~~~------~~~~~~~~~~~l~~~~l~~~~-------~~~~---~~ 138 (306)
T PRK13537 85 VPQFDNLDPDFTVRENLLVFGR----------YFGLS------AAAARALVPPLLEFAKLENKA-------DAKV---GE 138 (306)
T ss_pred EeccCcCCCCCcHHHHHHHHHH----------HcCCC------HHHHHHHHHHHHHHcCCchHh-------cCch---hh
Confidence 999999986 699999974211 00000 000112345677777764332 3222 46
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||+|||||++| ||||+++|++|+|||||++||+...+.+.++++
T Consensus 139 LS~G~~qrl~l------------------------------------a~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~ 182 (306)
T PRK13537 139 LSGGMKRRLTL------------------------------------ARALVNDPDVLVLDEPTTGLDPQARHLMWERLR 182 (306)
T ss_pred CCHHHHHHHHH------------------------------------HHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999988877665
Q ss_pred h---cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1336 D---MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1336 ~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
+ .|+|+|.++|.++.+ ..+|+++.|.+|
T Consensus 183 ~l~~~g~till~sH~l~e~~~~~d~i~il~~G 214 (306)
T PRK13537 183 SLLARGKTILLTTHFMEEAERLCDRLCVIEEG 214 (306)
T ss_pred HHHhCCCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 3 489999999999766 678999888654
No 472
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.7e-33 Score=280.36 Aligned_cols=191 Identities=20% Similarity=0.306 Sum_probs=158.6
Q ss_pred CcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEecCCCCCCCcch
Q 000647 1111 SQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYVPQRPYTCLGTL 1188 (1374)
Q Consensus 1111 ~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~VpQ~P~Lf~GTl 1188 (1374)
++.++|+++||++.+||+++|+|||||||||+++.+.-|.+|++|.++..|.|++.. ..+|++++|+-|.|-||.+||
T Consensus 14 ~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tV 93 (223)
T COG4619 14 GDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTV 93 (223)
T ss_pred CCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccch
Confidence 467899999999999999999999999999999999999999999999999999988 588999999999999999999
Q ss_pred HHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCChhhhhhhcccc
Q 000647 1189 RDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRLGMVS 1268 (1374)
Q Consensus 1189 R~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSgGQrQrlai~~ 1268 (1374)
.||+.+|-... .-........+.|+.+++.+-+ ++.+ -..||||||||+|+
T Consensus 94 eDNlifP~~~r------------------~rr~dr~aa~~llar~~l~~~~------L~k~---it~lSGGE~QriAl-- 144 (223)
T COG4619 94 EDNLIFPWQIR------------------NRRPDRAAALDLLARFALPDSI------LTKN---ITELSGGEKQRIAL-- 144 (223)
T ss_pred hhccccchHHh------------------ccCCChHHHHHHHHHcCCchhh------hcch---hhhccchHHHHHHH--
Confidence 99999985311 0012223344556666654322 1222 35699999999999
Q ss_pred chhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHH----HhcCceEEEe
Q 000647 1269 HLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLA----KDMGITFVTS 1344 (1374)
Q Consensus 1269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~----~~~~~TvI~I 1344 (1374)
+|-|---||||+|||+|||||+.+.+.+.+++ ++.++.++=|
T Consensus 145 ----------------------------------iR~Lq~~P~ILLLDE~TsALD~~nkr~ie~mi~~~v~~q~vAv~Wi 190 (223)
T COG4619 145 ----------------------------------IRNLQFMPKILLLDEITSALDESNKRNIEEMIHRYVREQNVAVLWI 190 (223)
T ss_pred ----------------------------------HHHhhcCCceEEecCchhhcChhhHHHHHHHHHHHhhhhceEEEEE
Confidence 99999999999999999999999877665544 4579999999
Q ss_pred cCCCCc-hhhccceEEEEcCC
Q 000647 1345 SQRPAL-IPFHSLELRLIDGE 1364 (1374)
Q Consensus 1345 aHRl~~-i~~~~~~l~l~~g~ 1364 (1374)
+|..+- ++..++.+.+.+|.
T Consensus 191 THd~dqa~rha~k~itl~~G~ 211 (223)
T COG4619 191 THDKDQAIRHADKVITLQPGH 211 (223)
T ss_pred ecChHHHhhhhheEEEeccCc
Confidence 999955 88889999997754
No 473
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.2e-32 Score=308.09 Aligned_cols=182 Identities=31% Similarity=0.390 Sum_probs=149.3
Q ss_pred eeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcC----CccEEEeCCCCc---cc-cccEEEEecCCC--CCc-CC
Q 000647 460 LVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPL----VSGHIAKPGVGS---DL-NKEIFYVPQRPY--TAV-GT 528 (1374)
Q Consensus 460 ~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~----~~G~I~~~g~~~---~~-~~~i~~v~Q~p~--l~~-~T 528 (1374)
+++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.+. +. ++.++|+||+|. ++. .|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 47899999999999999999999999999999999999 899999998651 12 357999999984 333 59
Q ss_pred HHHHhcCCCCCCcccCCCCHHHHHHHHHHcCCh---hHHhcCCCCccccCCCCCChhHHHHHHHHHHHccCCCEEEEecC
Q 000647 529 LRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLE---YLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAILDEC 605 (1374)
Q Consensus 529 v~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~---~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~~p~illLDEp 605 (1374)
+.+|+.++............+++.++++.+++. +..++.+ ..||||||||++||||++++|+++|||||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--------~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYP--------FQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCCh--------hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 999886542111000111234678899999997 4455544 68999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 606 TSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 606 tsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|++||+.+.+.+.+.+++ .|+|+|++||+++.+. .+|++++|++
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 201 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDD 201 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999998887754 3789999999999885 7999999975
No 474
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-32 Score=307.61 Aligned_cols=199 Identities=21% Similarity=0.258 Sum_probs=162.7
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++||++.|+. .+ .|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++......+.+++|+||
T Consensus 2 l~~~~l~~~~~~-~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 78 (232)
T PRK10771 2 LKLTDITWLYHH-LP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQ 78 (232)
T ss_pred eEEEEEEEEECC-cc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEec
Confidence 789999999874 22 399999999999999999999999999999999999999999999988765434567999999
Q ss_pred CCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
+|.+|.+ |++||+.++....- ......++++.++++.+++...+.+. ...|||
T Consensus 79 ~~~~~~~~tv~e~l~~~~~~~~----------------~~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 132 (232)
T PRK10771 79 ENNLFSHLTVAQNIGLGLNPGL----------------KLNAAQREKLHAIARQMGIEDLLARL----------PGQLSG 132 (232)
T ss_pred ccccccCCcHHHHHhccccccc----------------CCCHHHHHHHHHHHHHcCcHHHHhCC----------cccCCH
Confidence 9999986 99999987632100 00001234567788888886655443 246999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| |||++++|+++||||||++||.++.+.+.+++++
T Consensus 133 G~~qrv~l------------------------------------aral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~ 176 (232)
T PRK10771 133 GQRQRVAL------------------------------------ARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVC 176 (232)
T ss_pred HHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999877665542
Q ss_pred --cCceEEEecCCCCch-hhccceEEEEcC
Q 000647 1337 --MGITFVTSSQRPALI-PFHSLELRLIDG 1363 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~i-~~~~~~l~l~~g 1363 (1374)
.|+|+|+++|++..+ .+.++++.+.+|
T Consensus 177 ~~~~~tiii~sH~~~~~~~~~d~i~~l~~g 206 (232)
T PRK10771 177 QERQLTLLMVSHSLEDAARIAPRSLVVADG 206 (232)
T ss_pred HhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 489999999999875 568899999654
No 475
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-33 Score=315.98 Aligned_cols=211 Identities=19% Similarity=0.199 Sum_probs=165.8
Q ss_pred CCCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCC-----CCCeEecCCCccccc----
Q 000647 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEE---- 1167 (1374)
Q Consensus 1097 ~g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~-----~~G~I~idg~dI~~~---- 1167 (1374)
.+.|+++||++.|++ +++|+|+||+|+|||.++|+||||||||||+++|.|+++| .+|+|+++|.++...
T Consensus 17 ~~~l~~~nl~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 17 EIKMRARDVSVFYGE-KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred CceEEEEeEEEEECC-EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 568999999999975 5799999999999999999999999999999999999975 899999999988642
Q ss_pred cCCcccEEEecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCc
Q 000647 1168 AGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWD 1247 (1374)
Q Consensus 1168 ~~~r~~i~~VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gld 1247 (1374)
...|.+++||||+|.+|.+|++||+.++.... +.. ......++++.++++.+++...+... ++
T Consensus 96 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~----------~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~---~~ 158 (267)
T PRK14235 96 VELRARVGMVFQKPNPFPKSIYENVAYGPRIH----------GLA----RSKAELDEIVETSLRKAGLWEEVKDR---LH 158 (267)
T ss_pred HHHhhceEEEecCCCCCCCcHHHHHHHHHHhc----------ccc----cchHHHHHHHHHHHHHcCCchhhhHH---hh
Confidence 23466899999999999999999997642100 000 00000123456778877775432211 11
Q ss_pred cccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHH
Q 000647 1248 ANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVE 1327 (1374)
Q Consensus 1248 t~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e 1327 (1374)
. ....||||||||++| ||||+++|+++||||||++||..+.
T Consensus 159 ~---~~~~LSgGq~qrv~l------------------------------------aral~~~p~lllLDEPt~~LD~~~~ 199 (267)
T PRK14235 159 E---PGTGLSGGQQQRLCI------------------------------------ARAIAVSPEVILMDEPCSALDPIAT 199 (267)
T ss_pred C---CcccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCCcCCCHHHH
Confidence 1 245799999999999 9999999999999999999999999
Q ss_pred HHHHHHHHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1328 EQLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1328 ~~l~~~~~~--~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+.+.+++++ .+.|+|+|+|+++.+ .+.++++.|.+|+
T Consensus 200 ~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~ 239 (267)
T PRK14235 200 AKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGN 239 (267)
T ss_pred HHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCE
Confidence 888776653 368999999999877 6678888886543
No 476
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-33 Score=313.96 Aligned_cols=217 Identities=21% Similarity=0.244 Sum_probs=164.6
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc---CCcccEE
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIF 1175 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~---~~r~~i~ 1175 (1374)
.|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..+.+++
T Consensus 5 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (255)
T PRK11300 5 LLSVSGLMMRFGG-LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVV 83 (255)
T ss_pred eEEEeeEEEEECC-EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeE
Confidence 5899999999864 57999999999999999999999999999999999999999999999999887652 2345699
Q ss_pred EecCCCCCCCc-chHHHhccCCCh-hHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1176 YVPQRPYTCLG-TLRDQIIYPLSR-EEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1176 ~VpQ~P~Lf~G-TlR~Nl~yp~~~-~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
|+||+|.+|.+ |+++|+.++... ...... ........ .........+.+.++++.+++.+.... ..
T Consensus 84 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~l~~~gl~~~~~~----------~~ 151 (255)
T PRK11300 84 RTFQHVRLFREMTVIENLLVAQHQQLKTGLF-SGLLKTPA-FRRAESEALDRAATWLERVGLLEHANR----------QA 151 (255)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccccchhh-hhhccccc-cccchhHHHHHHHHHHHhCChhhhhhC----------Ch
Confidence 99999999986 999999875310 000000 00000000 000000011335566777766543322 24
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||+|||||++| |||++++|+++||||||++||.++.+.+.++
T Consensus 152 ~~LS~G~~qrv~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~ 195 (255)
T PRK11300 152 GNLAYGQQRRLEI------------------------------------ARCMVTQPEILMLDEPAAGLNPKETKELDEL 195 (255)
T ss_pred hhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCccCCCHHHHHHHHHH
Confidence 5799999999999 9999999999999999999999999887775
Q ss_pred HHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1334 AKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1334 ~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+++ .|+|+|+|+|+++.+ ++.++++.|.+|+
T Consensus 196 L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 231 (255)
T PRK11300 196 IAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGT 231 (255)
T ss_pred HHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 532 389999999999776 6689999997654
No 477
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.1e-32 Score=315.42 Aligned_cols=204 Identities=19% Similarity=0.236 Sum_probs=162.4
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc-----CCccc
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA-----GSGCG 1173 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~-----~~r~~ 1173 (1374)
.|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+ ..+++
T Consensus 7 ~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~ 85 (269)
T PRK11831 7 LVDMRGVSFTRGN-RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKR 85 (269)
T ss_pred eEEEeCeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhhc
Confidence 4899999998864 57999999999999999999999999999999999999999999999999886542 23567
Q ss_pred EEEecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccccc
Q 000647 1174 IFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNW 1252 (1374)
Q Consensus 1174 i~~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~ 1252 (1374)
++||||+|.+|.+ |++||+.++..... .. .....++.+.+.++.+++.+...+.
T Consensus 86 i~~v~q~~~~~~~~tv~enl~~~~~~~~---------~~------~~~~~~~~~~~~l~~~gl~~~~~~~---------- 140 (269)
T PRK11831 86 MSMLFQSGALFTDMNVFDNVAYPLREHT---------QL------PAPLLHSTVMMKLEAVGLRGAAKLM---------- 140 (269)
T ss_pred EEEEecccccCCCCCHHHHHHHHHHHcc---------CC------CHHHHHHHHHHHHHHcCChhhhhCC----------
Confidence 9999999999987 99999975421000 00 0000122355667777775433322
Q ss_pred ccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH
Q 000647 1253 EDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR 1332 (1374)
Q Consensus 1253 g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~ 1332 (1374)
...||||||||++| ||||+++|+++||||||++||.++.+.+.+
T Consensus 141 ~~~LSgGq~qrv~l------------------------------------aral~~~p~lllLDEPt~~LD~~~~~~l~~ 184 (269)
T PRK11831 141 PSELSGGMARRAAL------------------------------------ARAIALEPDLIMFDEPFVGQDPITMGVLVK 184 (269)
T ss_pred hhhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCCccCCHHHHHHHHH
Confidence 35799999999999 999999999999999999999999987776
Q ss_pred HHHh----cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1333 LAKD----MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1333 ~~~~----~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
++++ .|+|+|+|+|++..+ ++.++++.|.+|+
T Consensus 185 ~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~ 221 (269)
T PRK11831 185 LISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKK 221 (269)
T ss_pred HHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCE
Confidence 5543 389999999998655 5688888886553
No 478
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=4.2e-32 Score=307.37 Aligned_cols=197 Identities=27% Similarity=0.357 Sum_probs=152.8
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCC--cCCccEEEeCCCCc------c-ccccE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLW--PLVSGHIAKPGVGS------D-LNKEI 515 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~--~~~~G~I~~~g~~~------~-~~~~i 515 (1374)
++++|+++.|+ ++++++|+||+|++|++++|+||||||||||+++|+|+. +|++|+|.++|.+. . .+..+
T Consensus 2 i~~~nl~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (248)
T PRK09580 2 LSIKDLHVSVE-DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGI 80 (248)
T ss_pred eEEEEEEEEeC-CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcce
Confidence 78999999996 467999999999999999999999999999999999994 69999999998641 1 12469
Q ss_pred EEEecCCCCCcC-CHHHHhcCCCCC---CcccCCCC----HHHHHHHHHHcCCh-hHHhcCCCCccccCCCCCChhHHHH
Q 000647 516 FYVPQRPYTAVG-TLRDQLIYPLTS---DQEVEPLT----HGGMVELLKNVDLE-YLLDRYPPEKEINWGDELSLGEQQR 586 (1374)
Q Consensus 516 ~~v~Q~p~l~~~-Tv~eni~~~~~~---~~~~~~~~----~~~~~~~l~~~~L~-~~~~~~~~~~~~~~g~~LSgGqkQR 586 (1374)
+|++|+|.++.. |..+++.+.... ........ .+.+.+.++.+++. ++.++.+ ...||||||||
T Consensus 81 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-------~~~LS~G~~qr 153 (248)
T PRK09580 81 FMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV-------NVGFSGGEKKR 153 (248)
T ss_pred EEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC-------CCCCCHHHHHH
Confidence 999999976553 444443221100 00000011 23455677777774 3333322 13799999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHhh--ccEEEEecC
Q 000647 587 LGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVAF--HDVVLSLDG 649 (1374)
Q Consensus 587 lalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~~--~d~il~l~~ 649 (1374)
++||||++++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+.. +|+++++++
T Consensus 154 v~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~ 221 (248)
T PRK09580 154 NDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQ 221 (248)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEEC
Confidence 9999999999999999999999999999999886653 47899999999999875 799999975
No 479
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-32 Score=313.25 Aligned_cols=206 Identities=24% Similarity=0.299 Sum_probs=164.8
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEe
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYV 1177 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~V 1177 (1374)
|+++||++.|++ +.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...++.++|+
T Consensus 3 l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (255)
T PRK11231 3 LRTENLTVGYGT-KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALL 81 (255)
T ss_pred EEEEeEEEEECC-EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEe
Confidence 789999999875 5799999999999999999999999999999999999999999999999988754 2345679999
Q ss_pred cCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCC
Q 000647 1178 PQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1374)
Q Consensus 1178 pQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~L 1256 (1374)
||+|.++.+ |++||+.++...... ..+. .....++.+.++++.+++.+..+.. ...|
T Consensus 82 ~q~~~~~~~~tv~~~i~~~~~~~~~------~~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~L 139 (255)
T PRK11231 82 PQHHLTPEGITVRELVAYGRSPWLS------LWGR------LSAEDNARVNQAMEQTRINHLADRR----------LTDL 139 (255)
T ss_pred cccCCCCCCccHHHHHHhccchhhh------hccC------CCHHHHHHHHHHHHHcCCHHHHcCC----------cccC
Confidence 999999877 999999865321000 0000 0001123456677777775443322 3579
Q ss_pred ChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh
Q 000647 1257 SLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD 1336 (1374)
Q Consensus 1257 SgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~ 1336 (1374)
|||||||++| |||++++|+++||||||++||.++.+.+.+.+++
T Consensus 140 S~G~~qrv~l------------------------------------aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~ 183 (255)
T PRK11231 140 SGGQRQRAFL------------------------------------AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRE 183 (255)
T ss_pred CHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999887776543
Q ss_pred ---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1337 ---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1337 ---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.|+|+|+++|+++.+ ++.|+++.+.+|.
T Consensus 184 l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 215 (255)
T PRK11231 184 LNTQGKTVVTVLHDLNQASRYCDHLVVLANGH 215 (255)
T ss_pred HHHCCCEEEEEECCHHHHHHhcCEEEEEECCe
Confidence 489999999999865 5789999996554
No 480
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-33 Score=310.86 Aligned_cols=200 Identities=20% Similarity=0.249 Sum_probs=159.6
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc---CCcccEE
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIF 1175 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~---~~r~~i~ 1175 (1374)
.|+++||++.|++ +++|+|+||+|+|||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... ..+++++
T Consensus 5 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 5 MLSFDKVSAHYGK-IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred EEEEEeEEEeeCC-ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 4899999998864 57999999999999999999999999999999999999999999999999887652 2456799
Q ss_pred EecCCCCCCCc-chHHHhccCCC-hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhC-CCchhhhhhccCCcccccc
Q 000647 1176 YVPQRPYTCLG-TLRDQIIYPLS-REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGV-RLSYLLEREEVGWDANLNW 1252 (1374)
Q Consensus 1176 ~VpQ~P~Lf~G-TlR~Nl~yp~~-~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v-~L~~~v~~~~~Gldt~~~~ 1252 (1374)
|+||+|.+|.+ |+++|+.++.. ..... .++.+.++++.+ ++.+.. + ..
T Consensus 84 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~-------------------~~~~~~~~l~~~~~l~~~~-------~---~~ 134 (237)
T PRK11614 84 IVPEGRRVFSRMTVEENLAMGGFFAERDQ-------------------FQERIKWVYELFPRLHERR-------I---QR 134 (237)
T ss_pred EeccCcccCCCCcHHHHHHHhhhccChhH-------------------HHHHHHHHHHHHHHHHHHH-------h---Cc
Confidence 99999999985 99999986431 00000 011233344433 122111 1 12
Q ss_pred ccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHH
Q 000647 1253 EDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYR 1332 (1374)
Q Consensus 1253 g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~ 1332 (1374)
...||+|||||++| |||++++|+|+||||||++||.++.+.+.+
T Consensus 135 ~~~LS~G~~qrl~l------------------------------------a~al~~~p~illlDEPt~~LD~~~~~~l~~ 178 (237)
T PRK11614 135 AGTMSGGEQQMLAI------------------------------------GRALMSQPRLLLLDEPSLGLAPIIIQQIFD 178 (237)
T ss_pred hhhCCHHHHHHHHH------------------------------------HHHHHhCCCEEEEcCccccCCHHHHHHHHH
Confidence 46799999999999 999999999999999999999999988777
Q ss_pred HHH---hcCceEEEecCCCC-chhhccceEEEEcCC
Q 000647 1333 LAK---DMGITFVTSSQRPA-LIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1333 ~~~---~~~~TvI~IaHRl~-~i~~~~~~l~l~~g~ 1364 (1374)
.++ ..|+|+|.++|+++ ..++.|+++.|.+|+
T Consensus 179 ~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (237)
T PRK11614 179 TIEQLREQGMTIFLVEQNANQALKLADRGYVLENGH 214 (237)
T ss_pred HHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCE
Confidence 654 25899999999996 567889999996543
No 481
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=311.87 Aligned_cols=209 Identities=23% Similarity=0.231 Sum_probs=164.6
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCC-----CCCeEecCCCccccc--cCCc
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDEE--AGSG 1171 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~-----~~G~I~idg~dI~~~--~~~r 1171 (1374)
.|+++||++.|++ +++++|+||+|++||.++|+||||||||||+++|.|+++| .+|+|.++|.++... ...|
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 81 (250)
T PRK14247 3 KIEIRDLKVSFGQ-VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELR 81 (250)
T ss_pred eEEEEeeEEEECC-eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHh
Confidence 4899999998875 5699999999999999999999999999999999999974 699999999988764 2456
Q ss_pred ccEEEecCCCCCC-CcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcccc
Q 000647 1172 CGIFYVPQRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1172 ~~i~~VpQ~P~Lf-~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
++|+||||+|.+| ..|++||+.++..... ... .....++.+.++++.++|.+.++. .++..
T Consensus 82 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~----------~~~----~~~~~~~~~~~~l~~~~l~~~~~~---~~~~~- 143 (250)
T PRK14247 82 RRVQMVFQIPNPIPNLSIFENVALGLKLNR----------LVK----SKKELQERVRWALEKAQLWDEVKD---RLDAP- 143 (250)
T ss_pred ccEEEEeccCccCCCCcHHHHHHHHHHhcc----------ccC----CHHHHHHHHHHHHHHcCCCcchhh---hhcCC-
Confidence 7899999999755 6799999976431000 000 000012346677888887543221 12222
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
...||||||||+++ ||||+++|+++||||||++||.++.+.+
T Consensus 144 --~~~LSgG~~qrv~l------------------------------------aral~~~p~lllLDEP~~~LD~~~~~~l 185 (250)
T PRK14247 144 --AGKLSGGQQQRLCI------------------------------------ARALAFQPEVLLADEPTANLDPENTAKI 185 (250)
T ss_pred --cccCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCCccCCHHHHHHH
Confidence 35799999999999 9999999999999999999999999888
Q ss_pred HHHHHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1331 YRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1331 ~~~~~~--~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.+.+++ .++|+|+|+|+++.+ .+.++++.|.+|+
T Consensus 186 ~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 222 (250)
T PRK14247 186 ESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQ 222 (250)
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCe
Confidence 776653 479999999999876 5789999996554
No 482
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=5.2e-33 Score=326.86 Aligned_cols=190 Identities=22% Similarity=0.185 Sum_probs=156.4
Q ss_pred cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc--CC----cccEEEecCCCCCCC
Q 000647 1112 QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--GS----GCGIFYVPQRPYTCL 1185 (1374)
Q Consensus 1112 ~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~--~~----r~~i~~VpQ~P~Lf~ 1185 (1374)
++.+++|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+ .+ |++++||||+|.+|+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 456899999999999999999999999999999999999999999999999998762 23 668999999999997
Q ss_pred c-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCChhhhhhh
Q 000647 1186 G-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSLGEQQRL 1264 (1374)
Q Consensus 1186 G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSgGQrQrl 1264 (1374)
. |+++||.++... .+. .....++.+.++++.++|..+..+. ..+||||||||+
T Consensus 85 ~~TV~eNi~~~~~~----------~~~------~~~~~~~~~~~~l~~vgL~~~~~~~----------p~~LSGGq~QRV 138 (363)
T TIGR01186 85 HMTILQNTSLGPEL----------LGW------PEQERKEKALELLKLVGLEEYEHRY----------PDELSGGMQQRV 138 (363)
T ss_pred CCCHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHhcCCchhhhCC----------hhhCCHHHHHHH
Confidence 5 999999865310 000 0000123456778888886655443 357999999999
Q ss_pred ccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH----hcCce
Q 000647 1265 GMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK----DMGIT 1340 (1374)
Q Consensus 1265 ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~----~~~~T 1340 (1374)
|| ||||+++|+|+|||||||+||+.+.+.+++.+. +.++|
T Consensus 139 ~l------------------------------------ARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~T 182 (363)
T TIGR01186 139 GL------------------------------------ARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKT 182 (363)
T ss_pred HH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE
Confidence 99 999999999999999999999999988877553 24899
Q ss_pred EEEecCCCC-chhhccceEEEEcC
Q 000647 1341 FVTSSQRPA-LIPFHSLELRLIDG 1363 (1374)
Q Consensus 1341 vI~IaHRl~-~i~~~~~~l~l~~g 1363 (1374)
+|.|+|+++ ..++.|+++.+.+|
T Consensus 183 ii~vTHd~~ea~~~~drI~vl~~G 206 (363)
T TIGR01186 183 IVFITHDLDEAIRIGDRIVIMKAG 206 (363)
T ss_pred EEEEeCCHHHHHHhCCEEEEEeCC
Confidence 999999996 46889999999654
No 483
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-32 Score=294.28 Aligned_cols=166 Identities=26% Similarity=0.386 Sum_probs=146.1
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEEEec
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 1178 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~~Vp 1178 (1374)
++++||++.|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...+++++|+|
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (173)
T cd03230 1 IEVRNLSKRYGK-KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYLP 79 (173)
T ss_pred CEEEEEEEEECC-eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEEe
Confidence 478999998875 4699999999999999999999999999999999999999999999999988654 34466899999
Q ss_pred CCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|+|.+|.+ |++||+. ||
T Consensus 80 q~~~~~~~~tv~~~~~--------------------------------------------------------------LS 97 (173)
T cd03230 80 EEPSLYENLTVRENLK--------------------------------------------------------------LS 97 (173)
T ss_pred cCCccccCCcHHHHhh--------------------------------------------------------------cC
Confidence 99998876 7777751 69
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh-
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD- 1336 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~- 1336 (1374)
+|||||++| ||||+++|+++||||||++||.++.+.+.+.+++
T Consensus 98 ~G~~qrv~l------------------------------------aral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~ 141 (173)
T cd03230 98 GGMKQRLAL------------------------------------AQALLHDPELLILDEPTSGLDPESRREFWELLREL 141 (173)
T ss_pred HHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999887776543
Q ss_pred --cCceEEEecCCCCchh-hccceEEEEcCC
Q 000647 1337 --MGITFVTSSQRPALIP-FHSLELRLIDGE 1364 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~i~-~~~~~l~l~~g~ 1364 (1374)
.|.|+|+++|+++.+. +.|+.+.+.+|+
T Consensus 142 ~~~g~tiii~th~~~~~~~~~d~i~~l~~g~ 172 (173)
T cd03230 142 KKEGKTILLSSHILEEAERLCDRVAILNNGR 172 (173)
T ss_pred HHCCCEEEEECCCHHHHHHhCCEEEEEeCCC
Confidence 4799999999997766 789999996653
No 484
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-32 Score=317.24 Aligned_cols=201 Identities=24% Similarity=0.273 Sum_probs=162.4
Q ss_pred CEEEeeeEEeCCC----cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc------c
Q 000647 1099 SISFSKLDIITPS----QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE------A 1168 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~----~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~------~ 1168 (1374)
.|+++||++.|++ .+++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.++... .
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 3789999999864 25799999999999999999999999999999999999999999999999988542 1
Q ss_pred CCcccEEEecCCC--CCCCcchHHHhccCCC---hhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCc-hhhhhh
Q 000647 1169 GSGCGIFYVPQRP--YTCLGTLRDQIIYPLS---REEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLERE 1242 (1374)
Q Consensus 1169 ~~r~~i~~VpQ~P--~Lf~GTlR~Nl~yp~~---~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~-~~v~~~ 1242 (1374)
..+.+++++||+| .+|..|++|||.++.. ...+ ..++.+.++++.++|. .+.++
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~-------------------~~~~~~~~~l~~~gL~~~~~~~- 141 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSED-------------------EAKEKALKWLKKVGLSEDLISK- 141 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHH-------------------HHHHHHHHHHHHcCCChhHhhC-
Confidence 2356799999999 5788899999975421 0000 0122355677777774 33222
Q ss_pred ccCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCC
Q 000647 1243 EVGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNAT 1322 (1374)
Q Consensus 1243 ~~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaL 1322 (1374)
....||||||||++| ||||+++|++|||||||++|
T Consensus 142 ---------~~~~LSgGq~qrl~l------------------------------------aral~~~p~lLlLDEPt~gL 176 (287)
T PRK13641 142 ---------SPFELSGGQMRRVAI------------------------------------AGVMAYEPEILCLDEPAAGL 176 (287)
T ss_pred ---------CcccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEECCCCCC
Confidence 135799999999999 99999999999999999999
Q ss_pred CHHHHHHHHHHHHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1323 SVDVEEQLYRLAKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1323 D~~~e~~l~~~~~~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
|..+.+.+.+.+++ .|.|+|.++|++..+ .+.|+++.|.+|+
T Consensus 177 D~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~ 222 (287)
T PRK13641 177 DPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGK 222 (287)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 99998877776543 489999999999765 6889999996654
No 485
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-33 Score=311.54 Aligned_cols=203 Identities=19% Similarity=0.309 Sum_probs=161.6
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc---CCcccEEE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA---GSGCGIFY 1176 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~---~~r~~i~~ 1176 (1374)
|+++||++.|++ +.+|+|+||+|+|||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+ ..|.+++|
T Consensus 4 l~~~~l~~~~~~-~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 82 (241)
T PRK10895 4 LTAKNLAKAYKG-RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGY 82 (241)
T ss_pred EEEeCcEEEeCC-EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEE
Confidence 789999999875 57999999999999999999999999999999999999999999999999886652 24567999
Q ss_pred ecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccC
Q 000647 1177 VPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~ 1255 (1374)
+||+|.+|.+ |++||+.++...... . .....+..+.++++.+++.....+ ....
T Consensus 83 ~~q~~~~~~~~tv~enl~~~~~~~~~---------~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~ 137 (241)
T PRK10895 83 LPQEASIFRRLSVYDNLMAVLQIRDD---------L------SAEQREDRANELMEEFHIEHLRDS----------MGQS 137 (241)
T ss_pred eccCCcccccCcHHHHHhhhhhcccc---------c------CHHHHHHHHHHHHHHcCCHHHhhc----------chhh
Confidence 9999999875 999999764210000 0 000012335566777666433221 2357
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHH
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAK 1335 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~ 1335 (1374)
||+|||||++| |||++++|+++||||||++||.++.+.+.+.++
T Consensus 138 LS~G~~qrv~l------------------------------------aral~~~p~llllDEPt~~LD~~~~~~l~~~l~ 181 (241)
T PRK10895 138 LSGGERRRVEI------------------------------------ARALAANPKFILLDEPFAGVDPISVIDIKRIIE 181 (241)
T ss_pred CCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999877765543
Q ss_pred ---hcCceEEEecCCCC-chhhccceEEEEcCC
Q 000647 1336 ---DMGITFVTSSQRPA-LIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1336 ---~~~~TvI~IaHRl~-~i~~~~~~l~l~~g~ 1364 (1374)
..|.|+|+++|++. ..++.|+++.|.+|+
T Consensus 182 ~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~ 214 (241)
T PRK10895 182 HLRDSGLGVLITDHNVRETLAVCERAYIVSQGH 214 (241)
T ss_pred HHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCe
Confidence 35899999999995 557789999996543
No 486
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.6e-32 Score=310.25 Aligned_cols=195 Identities=21% Similarity=0.300 Sum_probs=163.3
Q ss_pred CCCEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEE
Q 000647 1097 QDSISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFY 1176 (1374)
Q Consensus 1097 ~g~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~ 1176 (1374)
.+.|+++||+++ .+++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++| +|+|
T Consensus 37 ~~~l~i~nls~~---~~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-----------~i~y 102 (282)
T cd03291 37 DNNLFFSNLCLV---GAPVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-----------RISF 102 (282)
T ss_pred CCeEEEEEEEEe---cccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-----------EEEE
Confidence 467999999995 35799999999999999999999999999999999999999999999887 3899
Q ss_pred ecCCCCCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccc-cccC
Q 000647 1177 VPQRPYTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLN-WEDI 1255 (1374)
Q Consensus 1177 VpQ~P~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~-~g~~ 1255 (1374)
+||+|++|++|++||+.++....+ ..+.+.++.+++.+.+...|.++++.++ .+..
T Consensus 103 v~q~~~l~~~tv~enl~~~~~~~~-----------------------~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~ 159 (282)
T cd03291 103 SSQFSWIMPGTIKENIIFGVSYDE-----------------------YRYKSVVKACQLEEDITKFPEKDNTVLGEGGIT 159 (282)
T ss_pred EeCcccccccCHHHHhhcccccCH-----------------------HHHHHHHHHhCCHHHHHhccccccceecCCCCc
Confidence 999999999999999976432111 1123445556666666677777776653 3578
Q ss_pred CChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH-H
Q 000647 1256 LSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL-A 1334 (1374)
Q Consensus 1256 LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~-~ 1334 (1374)
||+|||||++| ||||+++|+++||||||++||.++.+.+.+. +
T Consensus 160 LSgGq~qrv~l------------------------------------AraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll 203 (282)
T cd03291 160 LSGGQRARISL------------------------------------ARAVYKDADLYLLDSPFGYLDVFTEKEIFESCV 203 (282)
T ss_pred CCHHHHHHHHH------------------------------------HHHHhcCCCEEEEECCCccCCHHHHHHHHHHHH
Confidence 99999999999 9999999999999999999999998877653 2
Q ss_pred H--hcCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1335 K--DMGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1335 ~--~~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
+ ..+.|+|+|+|++..+...|+.+.|.+|+
T Consensus 204 ~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~ 235 (282)
T cd03291 204 CKLMANKTRILVTSKMEHLKKADKILILHEGS 235 (282)
T ss_pred HHhhCCCEEEEEeCChHHHHhCCEEEEEECCE
Confidence 2 24789999999998899999999996654
No 487
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-32 Score=315.61 Aligned_cols=203 Identities=23% Similarity=0.335 Sum_probs=163.7
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc----cCCcccEE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----AGSGCGIF 1175 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~----~~~r~~i~ 1175 (1374)
|+++||+++|+..+++++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...+.+|+
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 81 (275)
T PRK13639 2 LETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTVG 81 (275)
T ss_pred EEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhheE
Confidence 68999999998656799999999999999999999999999999999999999999999999988522 13456799
Q ss_pred EecCCC--CCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1176 YVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1176 ~VpQ~P--~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
|+||+| .+|..|++||+.++... .+. ......+.+.++++.++|.++..+. .
T Consensus 82 ~v~q~~~~~~~~~tv~e~i~~~~~~----------~~~------~~~~~~~~~~~~l~~~~L~~~~~~~----------~ 135 (275)
T PRK13639 82 IVFQNPDDQLFAPTVEEDVAFGPLN----------LGL------SKEEVEKRVKEALKAVGMEGFENKP----------P 135 (275)
T ss_pred EEeeChhhhhccccHHHHHHHHHHH----------cCC------CHHHHHHHHHHHHHHCCCchhhcCC----------h
Confidence 999998 57889999999754210 000 0000123356677877775433221 3
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||||||||++| |||++++|+++||||||++||..+...+.+.
T Consensus 136 ~~LS~Gq~qrv~l------------------------------------aral~~~p~llllDEPt~gLD~~~~~~l~~~ 179 (275)
T PRK13639 136 HHLSGGQKKRVAI------------------------------------AGILAMKPEIIVLDEPTSGLDPMGASQIMKL 179 (275)
T ss_pred hhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHH
Confidence 5799999999999 9999999999999999999999999887765
Q ss_pred HHh---cCceEEEecCCCCchh-hccceEEEEcCC
Q 000647 1334 AKD---MGITFVTSSQRPALIP-FHSLELRLIDGE 1364 (1374)
Q Consensus 1334 ~~~---~~~TvI~IaHRl~~i~-~~~~~l~l~~g~ 1364 (1374)
+++ .|+|+|.|+|++..+. +.|+++.+.+|+
T Consensus 180 l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~ 214 (275)
T PRK13639 180 LYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGK 214 (275)
T ss_pred HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 543 4899999999998764 789999997654
No 488
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=8.2e-33 Score=308.58 Aligned_cols=203 Identities=19% Similarity=0.261 Sum_probs=160.0
Q ss_pred EEEeeeEEeCCCc---ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCC---CCCCeEecCCCccccccCCccc
Q 000647 1100 ISFSKLDIITPSQ---KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWP---VVSGSLTKPSQHIDEEAGSGCG 1173 (1374)
Q Consensus 1100 I~f~~V~~~yp~~---~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~---~~~G~I~idg~dI~~~~~~r~~ 1173 (1374)
+.|+||++.||.. +++++|+||+|++||.++|+||||||||||+++|.|+++ |.+|+|.++|.++... ..|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~-~~~~~ 82 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPD-QFQKC 82 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChH-Hhccc
Confidence 4699999999875 789999999999999999999999999999999999999 9999999999887642 34678
Q ss_pred EEEecCCCCCCCc-chHHHhccCCChh-HHHHHHHhhccCCCcccccCCCChHHHHH-HHHhCCCchhhhhhccCCcccc
Q 000647 1174 IFYVPQRPYTCLG-TLRDQIIYPLSRE-EAELRALKLHGKGEKLVDTTNILDSYLKT-ILEGVRLSYLLEREEVGWDANL 1250 (1374)
Q Consensus 1174 i~~VpQ~P~Lf~G-TlR~Nl~yp~~~~-e~~~~~~~~~~~~~~~~~~~~~~d~~l~~-~L~~v~L~~~v~~~~~Gldt~~ 1250 (1374)
++++||+|.+|.+ |++||+.++.... .... .....+....+ .++.+++.+..++
T Consensus 83 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~~~l~~~~~~--------- 139 (226)
T cd03234 83 VAYVRQDDILLPGLTVRETLTYTAILRLPRKS--------------SDAIRKKRVEDVLLRDLALTRIGGN--------- 139 (226)
T ss_pred EEEeCCCCccCcCCcHHHHHHHHHHhhccccc--------------chHHHHHHHHHHHHHhhcchhhhcc---------
Confidence 9999999999988 9999997642100 0000 00000111223 5555554332211
Q ss_pred ccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHH
Q 000647 1251 NWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQL 1330 (1374)
Q Consensus 1251 ~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l 1330 (1374)
....||+|||||++| |||++++|+++||||||++||..+...+
T Consensus 140 -~~~~LS~G~~qrl~l------------------------------------aral~~~p~illlDEP~~gLD~~~~~~~ 182 (226)
T cd03234 140 -LVKGISGGERRRVSI------------------------------------AVQLLWDPKVLILDEPTSGLDSFTALNL 182 (226)
T ss_pred -cccCcCHHHHHHHHH------------------------------------HHHHHhCCCEEEEeCCCcCCCHHHHHHH
Confidence 235799999999999 9999999999999999999999999887
Q ss_pred HHHHHh---cCceEEEecCCC--CchhhccceEEEEcC
Q 000647 1331 YRLAKD---MGITFVTSSQRP--ALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1331 ~~~~~~---~~~TvI~IaHRl--~~i~~~~~~l~l~~g 1363 (1374)
.+++++ .+.|+|+++|++ ...++.|+++.+.+|
T Consensus 183 ~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G 220 (226)
T cd03234 183 VSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSG 220 (226)
T ss_pred HHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCC
Confidence 776543 489999999997 467889999999654
No 489
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-32 Score=316.98 Aligned_cols=206 Identities=22% Similarity=0.309 Sum_probs=168.1
Q ss_pred CCCEEEeeeEEeCCC-cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCC---CeEecCCCcccccc--CC
Q 000647 1097 QDSISFSKLDIITPS-QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVS---GSLTKPSQHIDEEA--GS 1170 (1374)
Q Consensus 1097 ~g~I~f~~V~~~yp~-~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~---G~I~idg~dI~~~~--~~ 1170 (1374)
++.|+++|+++.|++ .+++++|+||+|++||.++|+||||||||||+++|.|+++|.+ |+|.++|.++...+ ..
T Consensus 3 ~~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 3 DNIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred CceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 356999999999975 4579999999999999999999999999999999999999987 89999999887542 34
Q ss_pred cccEEEecCCC--CCCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcc
Q 000647 1171 GCGIFYVPQRP--YTCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1374)
Q Consensus 1171 r~~i~~VpQ~P--~Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt 1248 (1374)
+.+++||||+| .++..|++|||.|+.... +. .....++.+.++++.++|.+...+.
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~----------~~------~~~~~~~~~~~~l~~~~L~~~~~~~------ 140 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENR----------AV------PRPEMIKIVRDVLADVGMLDYIDSE------ 140 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhC----------CC------CHHHHHHHHHHHHHHCCChhHhcCC------
Confidence 56899999999 467889999997652100 00 0000123456778888886655443
Q ss_pred ccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHH
Q 000647 1249 NLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEE 1328 (1374)
Q Consensus 1249 ~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~ 1328 (1374)
...||+|||||++| ||||+++|+++||||||++||..+.+
T Consensus 141 ----~~~LS~G~~qrv~l------------------------------------aral~~~P~llllDEPt~gLD~~~~~ 180 (282)
T PRK13640 141 ----PANLSGGQKQRVAI------------------------------------AGILAVEPKIIILDESTSMLDPAGKE 180 (282)
T ss_pred ----cccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEECCcccCCHHHHH
Confidence 35799999999999 99999999999999999999999998
Q ss_pred HHHHHHHh----cCceEEEecCCCCchhhccceEEEEcCC
Q 000647 1329 QLYRLAKD----MGITFVTSSQRPALIPFHSLELRLIDGE 1364 (1374)
Q Consensus 1329 ~l~~~~~~----~~~TvI~IaHRl~~i~~~~~~l~l~~g~ 1364 (1374)
.+.+.+++ .|+|+|+++|+++.+.+.|+++.+.+|.
T Consensus 181 ~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~ 220 (282)
T PRK13640 181 QILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGK 220 (282)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 77765542 3899999999998889999999997664
No 490
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-32 Score=314.43 Aligned_cols=202 Identities=20% Similarity=0.227 Sum_probs=161.2
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc----cCCcccEE
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE----AGSGCGIF 1175 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~----~~~r~~i~ 1175 (1374)
|+++||++.|++ +.+|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...|++|+
T Consensus 2 l~~~~l~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~ 80 (271)
T PRK13638 2 LATSDLWFRYQD-EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVA 80 (271)
T ss_pred eEEEEEEEEcCC-cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheE
Confidence 689999999974 5699999999999999999999999999999999999999999999999988421 23456799
Q ss_pred EecCCCC--CCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1176 YVPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1176 ~VpQ~P~--Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
||||+|. ++..|+.+|+.++.... +. ......+.+.++++.+++.++..+ ..
T Consensus 81 ~v~q~~~~~~~~~~~~~~l~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~ 134 (271)
T PRK13638 81 TVFQDPEQQIFYTDIDSDIAFSLRNL----------GV------PEAEITRRVDEALTLVDAQHFRHQ----------PI 134 (271)
T ss_pred EEeeChhhccccccHHHHHHHHHHHc----------CC------CHHHHHHHHHHHHHHcCCHhHhcC----------Cc
Confidence 9999996 57788999997542100 00 000011234567777777544322 13
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||||||||++| ||||+++|+++||||||++||.++.+.+.++
T Consensus 135 ~~LSgG~~qrl~l------------------------------------araL~~~p~lllLDEPt~~LD~~~~~~l~~~ 178 (271)
T PRK13638 135 QCLSHGQKKRVAI------------------------------------AGALVLQARYLLLDEPTAGLDPAGRTQMIAI 178 (271)
T ss_pred hhCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 5799999999999 9999999999999999999999999887776
Q ss_pred HHh---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1334 AKD---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1334 ~~~---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
+++ .|+|+|+|+|++..+ .+.|+++.|.+|+
T Consensus 179 l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~ 213 (271)
T PRK13638 179 IRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQ 213 (271)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 543 489999999999876 6789999996553
No 491
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.3e-32 Score=321.68 Aligned_cols=206 Identities=23% Similarity=0.296 Sum_probs=162.5
Q ss_pred CCEEEeeeEEeCCC------------cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccc
Q 000647 1098 DSISFSKLDIITPS------------QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHID 1165 (1374)
Q Consensus 1098 g~I~f~~V~~~yp~------------~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~ 1165 (1374)
.-|+++|++++|+. ...+++|+||+|++||.+||+|+||||||||+++|.|+.+|.+|+|.++|.++.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 35899999998863 246999999999999999999999999999999999999999999999999987
Q ss_pred ccc-----CCcccEEEecCCC--CCC-CcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCch
Q 000647 1166 EEA-----GSGCGIFYVPQRP--YTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSY 1237 (1374)
Q Consensus 1166 ~~~-----~~r~~i~~VpQ~P--~Lf-~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~ 1237 (1374)
+.+ ..|.+|+||||+| .|+ ..|+++||.++...... +. ..+..++.+.++++.++|.+
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~--------~~------~~~~~~~~~~~~l~~vgl~~ 152 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP--------KL------SRQEVKDRVKAMMLKVGLLP 152 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc--------CC------CHHHHHHHHHHHHHHcCCCh
Confidence 652 2456899999999 466 57999999754210000 00 00001233556788887732
Q ss_pred -hhhhhccCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEee
Q 000647 1238 -LLEREEVGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILD 1316 (1374)
Q Consensus 1238 -~v~~~~~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLD 1316 (1374)
...+ ...+||||||||++| ||||+++|++||||
T Consensus 153 ~~~~~----------~p~~LSgG~~QRv~i------------------------------------ArAL~~~P~llilD 186 (331)
T PRK15079 153 NLINR----------YPHEFSGGQCQRIGI------------------------------------ARALILEPKLIICD 186 (331)
T ss_pred HHhcC----------CcccCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEe
Confidence 2222 246799999999999 99999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHh----cCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1317 ECTNATSVDVEEQLYRLAKD----MGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1317 EaTSaLD~~~e~~l~~~~~~----~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
||||+||+.+...+.+++++ .|.|+|.|+|+++.+. +.|+++.|.+|
T Consensus 187 EPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G 238 (331)
T PRK15079 187 EPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLG 238 (331)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 99999999999877665532 4899999999998875 68999998654
No 492
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3e-32 Score=308.07 Aligned_cols=189 Identities=24% Similarity=0.311 Sum_probs=156.4
Q ss_pred EEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeCCCCc------cccccEEEEe
Q 000647 446 EFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKPGVGS------DLNKEIFYVP 519 (1374)
Q Consensus 446 ~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~g~~~------~~~~~i~~v~ 519 (1374)
+++||++. .+|+|+||++++||+++|+||||||||||+++|+|+.++ +|+|.++|.+. .+++.++|+|
T Consensus 2 ~~~~l~~~-----~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~~v~ 75 (248)
T PRK03695 2 QLNDVAVS-----TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRAYLS 75 (248)
T ss_pred cccccchh-----ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheEEec
Confidence 45677764 279999999999999999999999999999999999965 99999998641 2345699999
Q ss_pred cCCCC-CcCCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHcc---
Q 000647 520 QRPYT-AVGTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYH--- 595 (1374)
Q Consensus 520 Q~p~l-~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~~--- 595 (1374)
|+|.+ +..|+++|+.++..... ......+++.++++.+++.+..++.+ ..||||||||++||||+++
T Consensus 76 q~~~~~~~~tv~~nl~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~--------~~LS~G~~qrv~la~al~~~~~ 146 (248)
T PRK03695 76 QQQTPPFAMPVFQYLTLHQPDKT-RTEAVASALNEVAEALGLDDKLGRSV--------NQLSGGEWQRVRLAAVVLQVWP 146 (248)
T ss_pred ccCccCCCccHHHHHHhcCccCC-CcHHHHHHHHHHHHHcCCHhHhcCCc--------ccCCHHHHHHHHHHHHHhcccc
Confidence 99864 45799999988642211 01112346788999999988777655 6899999999999999997
Q ss_pred ----CCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhH-hhccEEEEecC
Q 000647 596 ----KPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALV-AFHDVVLSLDG 649 (1374)
Q Consensus 596 ----~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~-~~~d~il~l~~ 649 (1374)
+|+++||||||++||+.+.+.+.+.+++ .|+|+|++||+++.+ ..+|++++|++
T Consensus 147 ~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~ 208 (248)
T PRK03695 147 DINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQ 208 (248)
T ss_pred ccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 6799999999999999999999888764 479999999999965 67999999975
No 493
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-32 Score=300.31 Aligned_cols=190 Identities=21% Similarity=0.278 Sum_probs=156.1
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc-cCCcccEEEec
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE-AGSGCGIFYVP 1178 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~-~~~r~~i~~Vp 1178 (1374)
|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.++... ...+++++++|
T Consensus 2 l~~~~l~~~~~~-~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i~~~~ 80 (200)
T PRK13540 2 LDVIELDFDYHD-QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQLCFVG 80 (200)
T ss_pred EEEEEEEEEeCC-eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhheEEec
Confidence 689999998875 5699999999999999999999999999999999999999999999999988653 34467899999
Q ss_pred CCCCCC-CcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCC
Q 000647 1179 QRPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILS 1257 (1374)
Q Consensus 1179 Q~P~Lf-~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LS 1257 (1374)
|+|.++ ..|+++|+.++.... ..+..+.++++.+++.+..++ . ...||
T Consensus 81 q~~~~~~~~tv~~~~~~~~~~~---------------------~~~~~~~~~l~~~~l~~~~~~-------~---~~~LS 129 (200)
T PRK13540 81 HRSGINPYLTLRENCLYDIHFS---------------------PGAVGITELCRLFSLEHLIDY-------P---CGLLS 129 (200)
T ss_pred cccccCcCCCHHHHHHHHHhcC---------------------cchHHHHHHHHHcCCchhhhC-------C---hhhcC
Confidence 999986 579999997642100 011245667777776443322 1 24699
Q ss_pred hhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh-
Q 000647 1258 LGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD- 1336 (1374)
Q Consensus 1258 gGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~- 1336 (1374)
+|||||++| |||++++|+++||||||++||..+.+.+.+.+++
T Consensus 130 ~G~~~rv~l------------------------------------aral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~ 173 (200)
T PRK13540 130 SGQKRQVAL------------------------------------LRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEH 173 (200)
T ss_pred HHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999888776553
Q ss_pred --cCceEEEecCCCCchhhccce
Q 000647 1337 --MGITFVTSSQRPALIPFHSLE 1357 (1374)
Q Consensus 1337 --~~~TvI~IaHRl~~i~~~~~~ 1357 (1374)
.|+|+|+++|+...++-.|.+
T Consensus 174 ~~~~~tiii~sh~~~~~~~~d~~ 196 (200)
T PRK13540 174 RAKGGAVLLTSHQDLPLNKADYE 196 (200)
T ss_pred HHcCCEEEEEeCCchhccccchh
Confidence 589999999999877665544
No 494
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=8.8e-33 Score=315.57 Aligned_cols=203 Identities=20% Similarity=0.251 Sum_probs=160.6
Q ss_pred EEEeeeEEeCCC--------cccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCcccccc---
Q 000647 1100 ISFSKLDIITPS--------QKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEA--- 1168 (1374)
Q Consensus 1100 I~f~~V~~~yp~--------~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~--- 1168 (1374)
|+++||++.|+. .+.+++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++...+
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 789999998863 467999999999999999999999999999999999999999999999999887652
Q ss_pred --CCcccEEEecCCCC--CC-CcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCc-hhhhhh
Q 000647 1169 --GSGCGIFYVPQRPY--TC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLS-YLLERE 1242 (1374)
Q Consensus 1169 --~~r~~i~~VpQ~P~--Lf-~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~-~~v~~~ 1242 (1374)
..|..|+||||+|. ++ ..|++|||.++.... ... .....++.+.++++.+++. ...+.
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~---------~~~------~~~~~~~~~~~~l~~~gl~~~~~~~- 146 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL---------TSL------DESEQKARIAELLDMVGLRSEDADK- 146 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh---------cCC------CHHHHHHHHHHHHHHcCCChhhhhC-
Confidence 24567999999983 44 469999996542100 000 0001133456777777764 22221
Q ss_pred ccCCccccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCC
Q 000647 1243 EVGWDANLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNAT 1322 (1374)
Q Consensus 1243 ~~Gldt~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaL 1322 (1374)
....||||||||++| |||++++|++|||||||++|
T Consensus 147 ---------~~~~LSgGe~qrv~l------------------------------------aral~~~p~illLDEPt~~L 181 (265)
T TIGR02769 147 ---------LPRQLSGGQLQRINI------------------------------------ARALAVKPKLIVLDEAVSNL 181 (265)
T ss_pred ---------ChhhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccC
Confidence 245799999999999 99999999999999999999
Q ss_pred CHHHHHHHHHHHHh----cCceEEEecCCCCchh-hccceEEEEcC
Q 000647 1323 SVDVEEQLYRLAKD----MGITFVTSSQRPALIP-FHSLELRLIDG 1363 (1374)
Q Consensus 1323 D~~~e~~l~~~~~~----~~~TvI~IaHRl~~i~-~~~~~l~l~~g 1363 (1374)
|.++.+.+.+.+++ .|.|+|+|+|++..+. +.|+++.|.+|
T Consensus 182 D~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G 227 (265)
T TIGR02769 182 DMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKG 227 (265)
T ss_pred CHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCC
Confidence 99998877665542 3899999999998775 78999999654
No 495
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=99.98 E-value=4.1e-32 Score=296.97 Aligned_cols=165 Identities=28% Similarity=0.396 Sum_probs=141.7
Q ss_pred EEEeeeEEEcCCCCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCC--CcCCccEEEeCCCC-c-----c-ccccE
Q 000647 445 IEFSGVKVVTPTGNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGL--WPLVSGHIAKPGVG-S-----D-LNKEI 515 (1374)
Q Consensus 445 i~~~~v~~~~~~~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl--~~~~~G~I~~~g~~-~-----~-~~~~i 515 (1374)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+ .+|++|+|.++|.+ . . .+..+
T Consensus 1 l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (200)
T cd03217 1 LEIKDLHVSVG-GKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLGI 79 (200)
T ss_pred CeEEEEEEEeC-CEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCcE
Confidence 46899999986 46799999999999999999999999999999999999 58999999999864 1 1 13459
Q ss_pred EEEecCCCCCcC-CHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChhHHhcCCCCccccCCCCCChhHHHHHHHHHHHc
Q 000647 516 FYVPQRPYTAVG-TLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFY 594 (1374)
Q Consensus 516 ~~v~Q~p~l~~~-Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~~~~~g~~LSgGqkQRlalARal~ 594 (1374)
+|+||+|.++.+ ++++++ +..+ ..||||||||++||||++
T Consensus 80 ~~v~q~~~~~~~~~~~~~l-------------------------------~~~~--------~~LS~G~~qrv~laral~ 120 (200)
T cd03217 80 FLAFQYPPEIPGVKNADFL-------------------------------RYVN--------EGFSGGEKKRNEILQLLL 120 (200)
T ss_pred EEeecChhhccCccHHHHH-------------------------------hhcc--------ccCCHHHHHHHHHHHHHh
Confidence 999999987664 444433 1111 469999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHh---cCCEEEEEccChhhHh--hccEEEEecC
Q 000647 595 HKPKFAILDECTSAVTTDMEERFCAKVRA---MGTSCITISHRPALVA--FHDVVLSLDG 649 (1374)
Q Consensus 595 ~~p~illLDEptsaLD~~~~~~i~~~l~~---~~~TiI~vtH~~~~~~--~~d~il~l~~ 649 (1374)
++|+++||||||++||+.+.+.+.+.+++ .++|+|++||+++.+. .+|+++++++
T Consensus 121 ~~p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~ 180 (200)
T cd03217 121 LEPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYD 180 (200)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEEC
Confidence 99999999999999999999999888764 4789999999999987 6999999975
No 496
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.98 E-value=1.9e-32 Score=301.27 Aligned_cols=192 Identities=26% Similarity=0.364 Sum_probs=159.1
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccccCCcccEEEecC
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEEAGSGCGIFYVPQ 1179 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~~~~r~~i~~VpQ 1179 (1374)
|+++||++.|+. +.+++|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++.... .+.+++++||
T Consensus 3 l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~~~~~ 80 (207)
T PRK13539 3 LEGEDLACVRGG-RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDPD-VAEACHYLGH 80 (207)
T ss_pred EEEEeEEEEECC-eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcchh-hHhhcEEecC
Confidence 789999999875 56999999999999999999999999999999999999999999999998765322 5678999999
Q ss_pred CCCCC-CcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCCCh
Q 000647 1180 RPYTC-LGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDILSL 1258 (1374)
Q Consensus 1180 ~P~Lf-~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~LSg 1258 (1374)
++.++ ..|+++|+.+.... . ...++++.++++.+++.+..... ...||+
T Consensus 81 ~~~~~~~~tv~~~l~~~~~~----------~----------~~~~~~~~~~l~~~~l~~~~~~~----------~~~LS~ 130 (207)
T PRK13539 81 RNAMKPALTVAENLEFWAAF----------L----------GGEELDIAAALEAVGLAPLAHLP----------FGYLSA 130 (207)
T ss_pred CCcCCCCCcHHHHHHHHHHh----------c----------CCcHHHHHHHHHHcCCHHHHcCC----------hhhcCH
Confidence 98875 67999999653210 0 01133467788888886543221 346999
Q ss_pred hhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh--
Q 000647 1259 GEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD-- 1336 (1374)
Q Consensus 1259 GQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~-- 1336 (1374)
|||||++| |||++++|+++||||||++||..+.+.+.+.+++
T Consensus 131 G~~qrl~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~ 174 (207)
T PRK13539 131 GQKRRVAL------------------------------------ARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHL 174 (207)
T ss_pred HHHHHHHH------------------------------------HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999887776543
Q ss_pred -cCceEEEecCCCCchhhccceEEE
Q 000647 1337 -MGITFVTSSQRPALIPFHSLELRL 1360 (1374)
Q Consensus 1337 -~~~TvI~IaHRl~~i~~~~~~l~l 1360 (1374)
.|+|+|+|+|++..++. ++++.+
T Consensus 175 ~~~~tiii~sH~~~~~~~-~~~~~~ 198 (207)
T PRK13539 175 AQGGIVIAATHIPLGLPG-ARELDL 198 (207)
T ss_pred HCCCEEEEEeCCchhhcc-CcEEee
Confidence 48999999999998887 787777
No 497
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.7e-32 Score=311.38 Aligned_cols=209 Identities=22% Similarity=0.223 Sum_probs=162.7
Q ss_pred CEEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCC-----CCCeEecCCCcccc--c--cC
Q 000647 1099 SISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPV-----VSGSLTKPSQHIDE--E--AG 1169 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~-----~~G~I~idg~dI~~--~--~~ 1169 (1374)
.|+++||++.|++ +++|+|+||+|++||.++|+||||||||||+++|.|+++| .+|+|.++|.++.. . ..
T Consensus 4 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 4 AIETVNLRVYYGS-NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred eEEEEeEEEEeCC-eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 4899999999975 5699999999999999999999999999999999999987 49999999998862 2 23
Q ss_pred CcccEEEecCCCCCCCc-chHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCcc
Q 000647 1170 SGCGIFYVPQRPYTCLG-TLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDA 1248 (1374)
Q Consensus 1170 ~r~~i~~VpQ~P~Lf~G-TlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt 1248 (1374)
+|.+++++||+|.+|++ |+++|+.++..... .. ......++.+.++++.+++...+.. .++.
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~----------~~----~~~~~~~~~~~~~l~~~~l~~~~~~---~~~~ 145 (253)
T PRK14267 83 VRREVGMVFQYPNPFPHLTIYDNVAIGVKLNG----------LV----KSKKELDERVEWALKKAALWDEVKD---RLND 145 (253)
T ss_pred HhhceeEEecCCccCCCCcHHHHHHHHHHhcC----------cc----CCHHHHHHHHHHHHHHcCCccchhh---hhcc
Confidence 46689999999999976 99999975421000 00 0000012335567777776432211 1111
Q ss_pred ccccccCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHH
Q 000647 1249 NLNWEDILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEE 1328 (1374)
Q Consensus 1249 ~~~~g~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~ 1328 (1374)
....||||||||++| ||||+++|+++||||||++||.++.+
T Consensus 146 ---~~~~LS~G~~qrv~l------------------------------------aral~~~p~llllDEP~~~LD~~~~~ 186 (253)
T PRK14267 146 ---YPSNLSGGQRQRLVI------------------------------------ARALAMKPKILLMDEPTANIDPVGTA 186 (253)
T ss_pred ---ChhhCCHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCCCccCCHHHHH
Confidence 246799999999999 99999999999999999999999998
Q ss_pred HHHHHHHh--cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1329 QLYRLAKD--MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1329 ~l~~~~~~--~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.+.+++++ .++|+|+|+|++..+ .+.|+++.|.+|+
T Consensus 187 ~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 225 (253)
T PRK14267 187 KIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGK 225 (253)
T ss_pred HHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCE
Confidence 88776553 368999999999765 5689999996654
No 498
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=99.98 E-value=2e-32 Score=311.17 Aligned_cols=206 Identities=25% Similarity=0.321 Sum_probs=164.9
Q ss_pred EEEeeeEEeCCCcccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEEEe
Q 000647 1100 ISFSKLDIITPSQKLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIFYV 1177 (1374)
Q Consensus 1100 I~f~~V~~~yp~~~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~~V 1177 (1374)
|+++|+++.|++ +.+|+|+||+|+|||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...+++++|+
T Consensus 2 l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (256)
T TIGR03873 2 LRLSRVSWSAGG-RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALV 80 (256)
T ss_pred ceEEeEEEEECC-EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEe
Confidence 689999999865 5799999999999999999999999999999999999999999999999988765 2345579999
Q ss_pred cCCCCC-CCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccccCC
Q 000647 1178 PQRPYT-CLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWEDIL 1256 (1374)
Q Consensus 1178 pQ~P~L-f~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g~~L 1256 (1374)
||+|.+ +..|+++|+.++...... .... .....++.+.++++.+++.+..++. ...|
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~~~~~------~~~~------~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~L 138 (256)
T TIGR03873 81 EQDSDTAVPLTVRDVVALGRIPHRS------LWAG------DSPHDAAVVDRALARTELSHLADRD----------MSTL 138 (256)
T ss_pred cccCccCCCCCHHHHHHhcchhhhh------hccC------CCHHHHHHHHHHHHHcCcHhhhcCC----------cccC
Confidence 999964 567999999865311000 0000 0001123467788888775543332 3579
Q ss_pred ChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHHHHh
Q 000647 1257 SLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRLAKD 1336 (1374)
Q Consensus 1257 SgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~~~~ 1336 (1374)
|+|||||++| |||++++|+++||||||++||.++.+.+.+++++
T Consensus 139 S~G~~qrl~l------------------------------------a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~ 182 (256)
T TIGR03873 139 SGGERQRVHV------------------------------------ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRE 182 (256)
T ss_pred CHHHHHHHHH------------------------------------HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999877765543
Q ss_pred ---cCceEEEecCCCCch-hhccceEEEEcCC
Q 000647 1337 ---MGITFVTSSQRPALI-PFHSLELRLIDGE 1364 (1374)
Q Consensus 1337 ---~~~TvI~IaHRl~~i-~~~~~~l~l~~g~ 1364 (1374)
.|.|+|+++|+++.+ ...|+++.|.+|+
T Consensus 183 ~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (256)
T TIGR03873 183 LAATGVTVVAALHDLNLAASYCDHVVVLDGGR 214 (256)
T ss_pred HHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 489999999999887 6799999996654
No 499
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=99.98 E-value=3.6e-32 Score=339.79 Aligned_cols=198 Identities=26% Similarity=0.342 Sum_probs=164.0
Q ss_pred CcEEEeeeEEEcCC----CCeeeeeeeEEEeCCCEEEEEcCCCCchhHHHHHHCCCCcCCccEEEeC-CCC----c----
Q 000647 443 NYIEFSGVKVVTPT----GNVLVENLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLVSGHIAKP-GVG----S---- 509 (1374)
Q Consensus 443 ~~i~~~~v~~~~~~----~~~~l~~isl~i~~Ge~~~IvG~sGsGKSTLl~~l~Gl~~~~~G~I~~~-g~~----~---- 509 (1374)
..++++|+++.|++ ++++++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++ |.+ .
T Consensus 278 ~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~ 357 (520)
T TIGR03269 278 PIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGP 357 (520)
T ss_pred ceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccch
Confidence 47999999999853 2579999999999999999999999999999999999999999999995 421 0
Q ss_pred ----cccccEEEEecCCCCCc-CCHHHHhcCCCCCCcccCCCCHHHHHHHHHHcCChh-----HHhcCCCCccccCCCCC
Q 000647 510 ----DLNKEIFYVPQRPYTAV-GTLRDQLIYPLTSDQEVEPLTHGGMVELLKNVDLEY-----LLDRYPPEKEINWGDEL 579 (1374)
Q Consensus 510 ----~~~~~i~~v~Q~p~l~~-~Tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----~~~~~~~~~~~~~g~~L 579 (1374)
..+++++|+||++.++. .|++||+.++.... ......++++.++++.+++.+ +.++.+ .+|
T Consensus 358 ~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~--------~~L 428 (520)
T TIGR03269 358 DGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE-LPDELARMKAVITLKMVGFDEEKAEEILDKYP--------DEL 428 (520)
T ss_pred hhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC-CCHHHHHHHHHHHHHhCCCCCccchhhhhCCh--------hhC
Confidence 12457999999987766 59999998642110 001112345778899999964 456655 689
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHh----cCCEEEEEccChhhHh-hccEEEEecC
Q 000647 580 SLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRA----MGTSCITISHRPALVA-FHDVVLSLDG 649 (1374)
Q Consensus 580 SgGqkQRlalARal~~~p~illLDEptsaLD~~~~~~i~~~l~~----~~~TiI~vtH~~~~~~-~~d~il~l~~ 649 (1374)
|||||||++|||||+.+|+++||||||++||+.+.+.+++.+++ .|.|+|+|||+++.+. .+|++++|++
T Consensus 429 SgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~ 503 (520)
T TIGR03269 429 SEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRD 503 (520)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999988753 4899999999999875 6999999975
No 500
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=2.4e-32 Score=312.64 Aligned_cols=203 Identities=22% Similarity=0.272 Sum_probs=163.7
Q ss_pred CEEEeeeEEeCCCc-ccccccceEEEeCCCeEEEEcCCCCcHHHHHHHHhcCCCCCCCeEecCCCccccc--cCCcccEE
Q 000647 1099 SISFSKLDIITPSQ-KLLARQLTFEIVPGKSLLVTGPNGSGKSSVFRVLRGLWPVVSGSLTKPSQHIDEE--AGSGCGIF 1175 (1374)
Q Consensus 1099 ~I~f~~V~~~yp~~-~~vL~~ls~~I~~Ge~v~IvG~SGsGKSTl~~~L~rl~~~~~G~I~idg~dI~~~--~~~r~~i~ 1175 (1374)
.|+++||++.|++. +++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.++|.++... ...|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 58999999999764 5799999999999999999999999999999999999999999999999988654 23456799
Q ss_pred EecCCCC--CCCcchHHHhccCCChhHHHHHHHhhccCCCcccccCCCChHHHHHHHHhCCCchhhhhhccCCccccccc
Q 000647 1176 YVPQRPY--TCLGTLRDQIIYPLSREEAELRALKLHGKGEKLVDTTNILDSYLKTILEGVRLSYLLEREEVGWDANLNWE 1253 (1374)
Q Consensus 1176 ~VpQ~P~--Lf~GTlR~Nl~yp~~~~e~~~~~~~~~~~~~~~~~~~~~~d~~l~~~L~~v~L~~~v~~~~~Gldt~~~~g 1253 (1374)
||||+|. ++..|+++|+.++.... +. ..+..++.+.++++.+++.+..+. ..
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~----------~~------~~~~~~~~~~~~l~~~~l~~~~~~----------~~ 140 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENH----------AV------PYDEMHRRVSEALKQVDMLERADY----------EP 140 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhc----------CC------CHHHHHHHHHHHHHHcCCchhhhC----------Cc
Confidence 9999994 45568999997653100 00 000012345667777777544332 23
Q ss_pred cCCChhhhhhhccccchhhHHhhhcccccchhhhHhhccccCCCCcccccccccccCcEEEeeccCCCCCHHHHHHHHHH
Q 000647 1254 DILSLGEQQRLGMVSHLVLIQLCSINKISELDWLIYCCLTLFFPPFSYKARLFFHKPKFGILDECTNATSVDVEEQLYRL 1333 (1374)
Q Consensus 1254 ~~LSgGQrQrlai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ARallr~PkillLDEaTSaLD~~~e~~l~~~ 1333 (1374)
..||+|||||++| |||++++|+++||||||++||..+.+.+.+.
T Consensus 141 ~~LS~G~~qrl~l------------------------------------aral~~~p~lllLDEPt~~LD~~~~~~l~~~ 184 (269)
T PRK13648 141 NALSGGQKQRVAI------------------------------------AGVLALNPSVIILDEATSMLDPDARQNLLDL 184 (269)
T ss_pred ccCCHHHHHHHHH------------------------------------HHHHHcCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 5799999999999 9999999999999999999999999887776
Q ss_pred HHh----cCceEEEecCCCCchhhccceEEEEcC
Q 000647 1334 AKD----MGITFVTSSQRPALIPFHSLELRLIDG 1363 (1374)
Q Consensus 1334 ~~~----~~~TvI~IaHRl~~i~~~~~~l~l~~g 1363 (1374)
+++ .|+|+|+|+|++..+...|+++.|.+|
T Consensus 185 L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G 218 (269)
T PRK13648 185 VRKVKSEHNITIISITHDLSEAMEADHVIVMNKG 218 (269)
T ss_pred HHHHHHhcCCEEEEEecCchHHhcCCEEEEEECC
Confidence 543 389999999999888788899998554
Done!