Citrus Sinensis ID: 000651

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370--
MDGSSGGSGGHRFRRIPRQSLAHLKLDPLIDENLEQWPHLNELVQCYRADWVKDENKYGHYESVSPPSFQNQIFEGPDTDIETETRLANARRGKGEDATDDDAPSTSGRQYTDATDVSKHFGISSLPAYEPAFDWENERSLTFGQRLSETPMSQYGCGLKISVKVLSLSFQAGLVEPFYGTICLYNRERREKLSEDFYFRVLPAEMQDAKISYEPRGIFYLDAPSASVCLLIQLERPATEESGVTPSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAIVPLFDNSIGAVSGGSASPSSPLAPSVSGSSSHEGVFEPISKITLDGKLGYSGGSSVIVEISNLNKVKECYTEESLQDPKRKVHKPVKGVLRLDIEKHQTAHADLENISESGSVTNDSIDPGDRATDLTFSKCPSNGSDVPQTSNSKWSYGDGKEISGNGSNAPDFSADDFQAFDFRTTTRNEPFLQLFHCLYVYPSSVSLSRKRNLFIRVELRKDDADVRRQPLEAIHPREPGVSLQKWAHTQVAVGARMAYYHDEIKVSLPAVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLPIIKELVPHYLQETGKERLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDDAERNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEQTRLFFHGLPLGEDIPPMQLRDGVFRCVMQLYDCLLTEVHERCKKGLSLAKRLNSSLGFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVCDHDLYVEMPGRDPSDRNYLSSVLIQEVFLTWDHDDLSQRAKAARILVVLLCKHEFDARYQKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLIVVMEIVRNLDDASLVKAWQQSIARTRLFFKLMEECLILFEHRKPADGMLLGASSRSPVGEGPSSPKYSDRLSPSINNYLSEASRQEVRELWEENLSAAVSLQVLEITEKFCMMAASHSIATDYGKLDCITAIIMSFFSRNQPVAFWKAFFPVFNRICDLHGATLMARENDRFLKQVAFHLLRLAVFRNVSIRKRAVIGLQILVRSSFYFMQTARLRVMLTITLSELMSDVQVTQMKSDGTLEESGEARRLRKSLEEMADEARSPSQFRECGLPEDALLAIPEKFTENRWSWSEVKHLSVSLLLALDASLEHSLLGSAMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQVH
ccccccccccccEEEEcccccccccccccccccccccHHHHHHHHHHcHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccHHHccccccccccccccccccHHHHHHccccccccccccccccccEEEEEEEcccccccccccEEEEEEEEEEccccccccccEEEEccccccccccccccccEEEEEcccccccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccEEEccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccccccccccEEEEEEEEccccccccccEEEccccccccccEEEEEEEEEEccccccccccEEEEEEEEcccccccccccccEEEEEcccccccccccccccccccccccEEEEEEEEEccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccHHHHHcHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHcccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHEEEc
cccccccccccEEEEEccccccHccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccEEccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccHHHHcccccccccccccccHHHcccEEEEEEEEEEEEccccccEEEEEEHEEHHccccEcccEEEEcccHHHHHHHcccccccEEEEccccccEEEEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHcHHHHHHccccccccHHHccHHccccccccccccccccHEccccccccHHHHHHHHHHHcccHHHcccccEEccEEEEEcccccccccccccccccccccccccccccccccEEEEEEEEEcccccccccccEEEEEEEEEccccccHHHcccEEEEEEEcccccccccccccEEEccccccHHHHHHHHHHHHccccccHHHHEEEEcccccccccEEEEEEEEEEccccccccccccccHEHHHHHHccccccccEccEEccccccccccccccccEEEccccEEEEEEEEEEEEEccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcHHHccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHccHHHHHHHHHHHHHHHHHHHHHcccHccccccccHHHHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHcHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEHHHHHcccEEEEEcccccccccHHHHHHHHHHHHHHHHHHcHHHHHHccccHHHHHEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHc
mdgssggsgghrfrriprqslahlkldplidenleqwPHLNELVQCYRAdwvkdenkyghyesvsppsfqnqifegpdtdieTETRLANarrgkgedatdddapstsgrqytdatdvskhfgisslpayepafdwenersltfgqrlsetpmsqygcglKISVKVLSLSfqaglvepfygticlYNRERREKLSEDFYFRVLPaemqdakisyeprgifyldapsASVCLLIQlerpateesgvtpsvysrkepvhltEREKQKLQVWSRIMPYRESFAWAIVplfdnsigavsggsaspssplapsvsgssshegvfepiskitldgklgysggSSVIVEISNLNkvkecyteeslqdpkrkvhkpvkgvLRLDIEKHQTAHAdlenisesgsvtndsidpgdratdltfskcpsngsdvpqtsnskwsygdgkeisgngsnapdfsaddfqafdfrtttrnepflQLFHCLyvypssvslsrkrNLFIRVELRkddadvrrqpleaihprepgvslqKWAHTQVAVGARMAYYHDEIkvslpavwtpmhhLLFTFFHVDLqtkleapkpvvigyaalplsthaqlrsEISLPIIKELVPHYLQETGKERLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYdrhtlrtsppwgSELLEAINSLKNVDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDDAERNRFLVNYVDyafddfggrqppvypglstVWGSLARskakgyrvgpvyDDVLAMAWFFLELIVKSMALEQTRLffhglplgedippmqlrdgVFRCVMQLYDCLLTEVHERCKKGLSLAKRLNSSLGFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVcdhdlyvempgrdpsdrnyLSSVLIQEVFLTWDHDDLSQRAKAARILVVLLCKHEfdaryqkpedkLYIAQLYFPLigqildempvfynlnaveKREVLIVVMEIVRNLDDASLVKAWQQSIARTRLFFKLMEECLILFehrkpadgmllgassrspvgegpsspkysdrlspsinnYLSEASRQEVRELWEENLSAAVSLQVLEITEKFCMMAAShsiatdygklDCITAIIMSFFSRNQPVAFWKAFFPVFNRICDLHGATLMARENDRFLKQVAFHLLRLAVFRNVSIRKRAVIGLQILVRSSFYFMQTARLRVMLTITLSELMSDVQVTqmksdgtleesGEARRLRKSLEEMAdearspsqfrecglpedallaipekftenrwswseVKHLSVSLLLALDASLEHSLLGSAMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQVH
mdgssggsgghrfrriprqslaHLKLDPLIDENLEQWPHLNELVQCYRADWVKDENKYGHYESVSPPSFQNQIFEGPDTDIETETRLanarrgkgedatdddapstsgrqytdatdvsKHFGISSLPAYEPAFDWENERSLTFGQRLSETPMSQYGCGLKISVKVLSLSFQAGLVEPFYGTICLYNRERREKLSEDFYFRVLPAEMQDAKISYEPRGIFYLDAPSASVCLLIQLERpateesgvtpsvysrkepvhlterekqKLQVWSRIMPYRESFAWAIVPLFDNSIGAVSGGSASPSSPLAPSVSGSSSHEGVFEPISKITLDGKLGYSGGSSVIVEISNLNKVKECyteeslqdpkrkvhkpVKGVLRLDIEKHQTAhadlenisesgsvtndSIDPGDRATDLtfskcpsngsdvpqtsnskWSYGDGKEISGNGSNAPDFSADDFQAFDFRTTTRNEPFLQLFHCLYVYpssvslsrkrnLFIRVelrkddadvrrqpleaihprepgvslqkWAHTQVAVGARMAYYHDEIKVSLPAVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLPIIKELVPHYLQETGKERLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRvqqesvddaerNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEQTRLFFHGLPLGEDIPPMQLRDGVFRCVMQLYDCLLTEVHERCKKGLSLAKRLNSSLGFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVCDHDLYVEMPGRDPSDRNYLSSVLIQEVFLTWDHDDLSQRAKAARILVVLLCKHEFDARYQKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLIVVMEIVRNLDDASLVKAWQQSIARTRLFFKLMEECLILFEHRKPADGMLLGASsrspvgegpsspkysdrlspSINNYLSEASRQEVRELWEENLSAAVSLQVLEITEKFCMMAASHSIATDYGKLDCITAIIMSFFSRNQPVAFWKAFFPVFNRICDLHGATLMARENDRFLKQVAFHLLRLavfrnvsirkraviglqilvrssfyfMQTARLRVMLTITLSELMSDVQVtqmksdgtleesgeARRLRKSLEEMadearspsqfrecgLPEDALLAIPEKFTENRWSWSEVKHLSVSLLLALDASLEHSLLGSAMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQVH
MDgssggsggHRFRRIPRQSLAHLKLDPLIDENLEQWPHLNELVQCYRADWVKDENKYGHYESVSPPSFQNQIFEGPDTDIETETRLANARRGKGEDATDDDAPSTSGRQYTDATDVSKHFGISSLPAYEPAFDWENERSLTFGQRLSETPMSQYGCGLKISVKVLSLSFQAGLVEPFYGTICLYNRERREKLSEDFYFRVLPAEMQDAKISYEPRGIFYLDAPSASVCLLIQLERPATEESGVTPSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAIVPLFDNsigavsggsaspssplapsvsgsssHEGVFEPISKITLDGKLGYSGGSSVIVEISNLNKVKECYTEESLQDPKRKVHKPVKGVLRLDIEKHQTAHADLENISESGSVTNDSIDPGDRATDLTFSKCPSNGSDVPQTSNSKWSYGDGKEISGNGSNapdfsaddfqafdfRTTTRNEPFLQLFHCLYVYPSSVSLSRKRNLFIRVELRKDDADVRRQPLEAIHPREPGVSLQKWAHTQVAVGARMAYYHDEIKVSLPAVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLPIIKELVPHYLQETGKERLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDDAERNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEQTRLFFHGLPLGEDIPPMQLRDGVFRCVMQLYDCLLTEVHERCKKGLSLAKRLNSSLGFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVCDHDLYVEMPGRDPSDRNYLSSVLIQEVFLTWDHDDLSQRAKAARILVVLLCKHEFDARYQKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLIVVMEIVRNLDDASLVKAWQQSIARTRLFFKLMEECLILFEHRKPADGMLLGASSRSPVGEGPSSPKYSDRLSPSINNYLSEASRQEVRELWEENLSAAVSLQVLEITEKFCMMAASHSIATDYGKLDCITAIIMSFFSRNQPVAFWKAFFPVFNRICDLHGATLMARENDRFLKQVAFHLLRLAVFRNVSIRKRAVIGLQILVRSSFYFMQTARLRVMLTITLSELMSDVQVTQMKSDGTLEESGEARRLRKSLEEMADEARSPSQFRECGLPEDALLAIPEKFTENRWSWSEVKhlsvslllaldaslehsllGSAMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWaeaaqcavavagvvmqvH
********************LAHLKLDPLIDENLEQWPHLNELVQCYRADWVKDENKYGHY**********************************************************HFGISSLPAYEPAFDWENERSLTFGQRLSETPMSQYGCGLKISVKVLSLSFQAGLVEPFYGTICLYNRERREKLSEDFYFRVLPAEMQDAKISYEPRGIFYLDAPSASVCLLIQLE****************************KLQVWSRIMPYRESFAWAIVPLFDNSIGA*************************FEPISKITLDGKLGYSGGSSVIVEISNLNKVKECYT*****************VLRL*****************************************************************************FQAFDFRTTTRNEPFLQLFHCLYVYPSSVSLSRKRNLFIRVELRK******************GVSLQKWAHTQVAVGARMAYYHDEIKVSLPAVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLPIIKELVPHYLQETGKERLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDDAERNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEQTRLFFHGLPLGEDIPPMQLRDGVFRCVMQLYDCLLTEVHERCKKGLSLAKRLNSSLGFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVCDHDLYVEMPGRDPSDRNYLSSVLIQEVFLTWDHDDLSQRAKAARILVVLLCKHEFDARYQKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLIVVMEIVRNLDDASLVKAWQQSIARTRLFFKLMEECLILFEHR*********************************************RELWEENLSAAVSLQVLEITEKFCMMAASHSIATDYGKLDCITAIIMSFFSRNQPVAFWKAFFPVFNRICDLHGATLMARENDRFLKQVAFHLLRLAVFRNVSIRKRAVIGLQILVRSSFYFMQTARLRVMLTITLSELMSD****************************************CGLPEDALLAIPEKFTENRWSWSEVKHLSVSLLLALDASLEHSLLGSAMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVM***
*******************************ENLEQWPHLNELVQCYRADWVKDENK**************************************************************************************************GCGLKISVKVLSLSFQAGLVEPFYGTICLYNRERREKLSEDFYFRVLPAEM***********IFYLDAPSASVCLLIQLERPATEESGVTPSV**************QKLQVWSRIMPYRESFAWAIVP*********************************************************************************KPVKGVLRLDIEKHQTAHA***********************************D***TSNSKWSYGDG***************DDFQAFDFRTTTRNEPFLQLFHCLYVYPSSVSLSRKRNLFIRVELRKDDADVRRQPLEAIHPREPGVSLQKWAHTQVAVGARMAYYHDEIKVSLPAVWTPMHHLLFTF*****************GYAALPLSTHAQLRSEISLPIIKELVPHY****************NAFKLRLRLCSSLYPINERIRDFFLEYDRHTL***********EAINSLKNVDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDDAERNRFLVNYVDYAFDDFGG****VYPGLSTVWGSLAR**********VYDDVLAMAWFFLELIVKSMALEQTRL***************LRDGVFRCVMQLYDCLLTEVHERCKKGLSLAKRLNSSLGFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVCDHDLYVEMPGRDPSDRNYLSSVLIQEVFLTWDHDDLSQRAKAARILVVLLCKHEFDARYQKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLIVVMEIVRNLDDASLVKAWQQSIARTRLFFKLMEECLILFEHRK***************************************SRQEVRELWEENLSAAVSLQVLEITEKFCMMAASHSIATDYGKLDCITAIIMSFFSRNQPVAFWKAFFPVFNRICDLHGATLMARENDRFLKQVAFHLLRLAVFRNVSIRKRAVIGLQILVRSSFYFMQTARLRVMLTITLSELMS***************SGEARRLRKSLEEMADEAR**************LL*I*****ENRWSWSEVKHLSVSLLLALDASLEHS*******MDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQVH
**********HRFRRIPRQSLAHLKLDPLIDENLEQWPHLNELVQCYRADWVKDENKYGHYESVSPPSFQNQIFEGPDTDIETETRLA*********************QYTDATDVSKHFGISSLPAYEPAFDWENERSLTFGQRLSETPMSQYGCGLKISVKVLSLSFQAGLVEPFYGTICLYNRERREKLSEDFYFRVLPAEMQDAKISYEPRGIFYLDAPSASVCLLIQLERPATEESGVTPSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAIVPLFDNSIG************************GVFEPISKITLDGKLGYSGGSSVIVEISNLNKVKECYT**********VHKPVKGVLRLDIEKHQTAHADLENISESGSVTNDSIDPGDRATDLTFSKC***********NSKWSYGDGKEISGNGSNAPDFSADDFQAFDFRTTTRNEPFLQLFHCLYVYPSSVSLSRKRNLFIRVELRKDDADVRRQPLEAIHPREPGVSLQKWAHTQVAVGARMAYYHDEIKVSLPAVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLPIIKELVPHYLQETGKERLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDDAERNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEQTRLFFHGLPLGEDIPPMQLRDGVFRCVMQLYDCLLTEVHERCKKGLSLAKRLNSSLGFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVCDHDLYVEMPGRDPSDRNYLSSVLIQEVFLTWDHDDLSQRAKAARILVVLLCKHEFDARYQKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLIVVMEIVRNLDDASLVKAWQQSIARTRLFFKLMEECLILFEHRKPADGMLLGAS***************DRLSPSINNYLSEASRQEVRELWEENLSAAVSLQVLEITEKFCMMAASHSIATDYGKLDCITAIIMSFFSRNQPVAFWKAFFPVFNRICDLHGATLMARENDRFLKQVAFHLLRLAVFRNVSIRKRAVIGLQILVRSSFYFMQTARLRVMLTITLSELMSDVQVTQMKS************LRKSL*************RECGLPEDALLAIPEKFTENRWSWSEVKHLSVSLLLALDASLEHSLLGSAMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQVH
******GSGGHRFRRIPRQSLAHLKLDPLIDENLEQWPHLNELVQCYRADWVKDENKYGHYESVSPPSFQN***********************************************KHFGISSLPAYEPAFDWE*E**LTFGQRLSETPMSQYGCGLKISVKVLSLSFQAGLVEPFYGTICLYNRERREKLSEDFYFRVLPAEMQDAKISYEPRGIFYLDAPSASVCLLIQLERPATEESGVTPSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAIVPLFDNSIGAVSGGSASPSSPL***************PISKITLDGKLGYSGGSSVIVEISNLNKVKECYTEESLQDPKRKVHKPVKGVLRLDIEKHQTAHADLENISESGSVTNDSIDPGDRATDLTFSKCPSNGSDVPQTSNSKWSYGDGKEISGNGSNAPDFSADDFQAFDFRTTTRNEPFLQLFHCLYVYPSSVSLSRKRNLFIRVELRKDDADVRRQPLEAIHPREPGVSLQKWAHTQVAVGARMAYYHDEIKVSLPAVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLPIIKELVPHYLQETGKERLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDDAERNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEQTRLFFHGLPLGEDIPPMQLRDGVFRCVMQLYDCLLTEVHERCKKGLSLAKRLNSSLGFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVCDHDLYVEMPGRDPSDRNYLSSVLIQEVFLTWDHDDLSQRAKAARILVVLLCKHEFDARYQKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLIVVMEIVRNLDDASLVKAWQQSIARTRLFFKLMEECLILFEHRKPA************************RLSPSINNYLSEASRQEVRELWEENLSAAVSLQVLEITEKFCMMAASHSIATDYGKLDCITAIIMSFFSRNQPVAFWKAFFPVFNRICDLHGATLMARENDRFLKQVAFHLLRLAVFRNVSIRKRAVIGLQILVRSSFYFMQTARLRVMLTITLSELMSDVQVTQMKSDGTLEESGEARRLRKSLEEMADEARSPSQFRECGLPEDALLAIPEKFTENRWSWSEVKHLSVSLLLALDASLEHSLLGSAMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQVH
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MDGSSGGSGGHRFRRIPRQSLAHLKLDPLIDENLEQWPHLNELVQCYRADWVKDENKYGHYESVSPPSFQNQIFEGPDTDIETETRLANARRGKGEDATDDDAPSTSGRQYTDATDVSKHFGISSLPAYEPAFDWENERSLTFGQRLSETPMSQYGCGLKISVKVLSLSFQAGLVEPFYGTICLYNRERREKLSEDFYFRVLPAEMQDAKISYEPRGIFYLDAPSASVCLLIQLERPATEESGVTPSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAIVPLFDNSIGAVSGGSASPSSPLAPSVSGSSSHEGVFEPISKITLDGKLGYSGGSSVIVEISNLNKVKECYTEESLQDPKRKVHKPVKGVLRLDIEKHQTAHADLENISESGSVTNDSIDPGDRATDLTFSKCPSNGSDVPQTSNSKWSYGDGKEISGNGSNAPDFSADDFQAFDFRTTTRNEPFLQLFHCLYVYPSSVSLSRKRNLFIRVELRKDDADVRRQPLEAIHPREPGVSLQKWAHTQVAVGARMAYYHDEIKVSLPAVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLPIIKELVPHYLQETGKERLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDDAERNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEQTRLFFHGLPLGEDIPPMQLRDGVFRCVMQLYDCLLTEVHERCKKGLSLAKRLNSSLGFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVCDHDLYVEMPGRDPSDRNYLSSVLIQEVFLTWDHDDLSQRAKAARILVVLLCKHEFDARYQKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLIVVMEIVRNLDDASLVKAWQQSIARTRLFFKLMEECLILFEHRKPADGMLLGASSRSPVGEGPSSPKYSDRLSPSINNYLSEASRQEVRELWEENLSAAVSLQVLEITEKFCMMAASHSIATDYGKLDCITAIIMSFFSRNQPVAFWKAFFPVFNRICDLHGATLMARENDRFLKQVAFHLLRLAVFRNVSIRKRAVIGLQILVRSSFYFMQTARLRVMLTITLSELMSDVQVTQMKSDGTLEESGEARRLRKSLEEMADEARSPSQFRECGLPEDALLAIPEKFTENRWSWSEVKHLSVSLLLALDASLEHSLLGSAMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQVH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1372 2.2.26 [Sep-21-2011]
Q8BZN6 2150 Dedicator of cytokinesis yes no 0.375 0.239 0.258 2e-41
Q96BY6 2186 Dedicator of cytokinesis yes no 0.375 0.235 0.256 2e-40
Q8BIK4 2055 Dedicator of cytokinesis no no 0.359 0.239 0.275 3e-38
Q9BZ29 2069 Dedicator of cytokinesis no no 0.389 0.258 0.266 2e-37
A2AF47 2073 Dedicator of cytokinesis no no 0.510 0.338 0.224 2e-36
Q5JSL3 2073 Dedicator of cytokinesis no no 0.359 0.237 0.249 1e-34
Q96HP0 2047 Dedicator of cytokinesis no no 0.309 0.207 0.284 2e-27
Q8VDR9 2080 Dedicator of cytokinesis no no 0.368 0.243 0.248 6e-26
Q8C147 2100 Dedicator of cytokinesis no no 0.156 0.102 0.280 7e-18
Q8R1A4 2130 Dedicator of cytokinesis no no 0.196 0.126 0.268 2e-16
>sp|Q8BZN6|DOC10_MOUSE Dedicator of cytokinesis protein 10 OS=Mus musculus GN=Dock10 PE=1 SV=3 Back     alignment and function desciption
 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 151/585 (25%), Positives = 259/585 (44%), Gaps = 70/585 (11%)

Query: 451  DFQAFDFRTTTRNEPFLQLFHCLYVYP------SSVSLSRKRNLFIRVELRKDDADVRRQ 504
            + + F + +T    P+    + +YVYP      S    ++ RN+ + +E +  D D  + 
Sbjct: 653  EVEEFIYDSTKYCRPYRVYKNQIYVYPKHLKYDSQKCFNKARNITVCIEFKNSDDDGAK- 711

Query: 505  PLEAIHPREPGVSLQKWAHTQVAVGARMAYYHDEIKVSLPAVWTPMHHLLFTFFHVDLQT 564
            P++ I+ +  G      A+T V   ++   + DE+K+ LP      HHLLF+F+H+    
Sbjct: 712  PMKCIYGKPGGPLFTSSAYTAVLHHSQNPDFSDEVKIELPTQLHGKHHLLFSFYHITCDI 771

Query: 565  KLEAPK------PVVIGYAALPLSTHAQLRS-EISLPIIKELVPHYLQ-------ETGKE 610
              +A           +GYA LPL  H Q+ S E ++PI   L P+YL        + G  
Sbjct: 772  NAKANAKKKEALETSVGYAWLPLMKHDQIASQEYNIPIATTLPPNYLSIQDPTSAKHGGS 831

Query: 611  RLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKN 670
             + +++ GK  FK+   + S++   +  +  FF +  +     S    S  + A  +L N
Sbjct: 832  DIKWVDGGKPLFKVSTFVVSTVNTQDPHVNAFFRQCQKREKDMSQSPTSSFVRACKNLLN 891

Query: 671  VDST-ALLQFLHPVLNMLLH-LIGNGGETLQVAAFRAMVNILTRVQQESVDDAERNRFLV 728
            VD   +++ FL  +LN L   L+ N  + +     R + +I+ +  +E +D +     + 
Sbjct: 892  VDKIHSIMSFLPIILNQLFKILVQNEEDEITATVTRVLADIVAKCHEEQLDHS-----VQ 946

Query: 729  NYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSM 788
            +Y+ + F     ++  ++  L+     L +S         +   VL  +WFF  +I+KSM
Sbjct: 947  SYIKFVFKTKSYKERTIHEELAKNLSDLLKSND-----STIVKHVLEHSWFFFAIILKSM 1001

Query: 789  ALEQTRLFFHGLPLGEDIPPMQLRDGVFRCVMQLYDCLLTEVHERCKKGLSLAKRLNSSL 848
            A          LP  +  P    +  +   VM L D ++     +CK+     KR N S+
Sbjct: 1002 AQHLIDTNKIQLPRAQRFPE-SYQSELDNLVMGLCDHVIW----KCKEAPEETKRANHSV 1056

Query: 849  GFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVCDHDLYVEM--PGR 906
              F     + ++   VF++V+ Y+  FS      L   K  FLQ VC H+ ++ +  P R
Sbjct: 1057 ARFLKRCFTFMDRGFVFKMVNNYISMFSSGEFKTLCQYKFDFLQEVCQHEHFIPLCLPIR 1116

Query: 907  -----DP------------SD------------RNYLSSVLIQEVFLTWDHDDLSQRAKA 937
                 DP            SD            +++L  +L++EV      +D   R  A
Sbjct: 1117 SANIPDPLTPSESIRELHASDMPEYSVTNEFCRKHFLIGILLREVGFAL-QEDQDIRHLA 1175

Query: 938  ARILVVLLCKHEFDARYQKPEDKLYIAQLYFPLIGQILDEMPVFY 982
              +L  L+ KH FD RY++P  +  IA LY PL G +LD MP  Y
Sbjct: 1176 LAVLKNLMAKHSFDDRYREPRKQAQIASLYMPLYGMLLDNMPRIY 1220
Potential guanine nucleotide exchange factor (GEF). GEF proteins activate some small GTPases by exchanging bound GDP for free GTP.
Mus musculus (taxid: 10090)
>sp|Q96BY6|DOC10_HUMAN Dedicator of cytokinesis protein 10 OS=Homo sapiens GN=DOCK10 PE=1 SV=3 Back     alignment and function description
>sp|Q8BIK4|DOCK9_MOUSE Dedicator of cytokinesis protein 9 OS=Mus musculus GN=Dock9 PE=1 SV=2 Back     alignment and function description
>sp|Q9BZ29|DOCK9_HUMAN Dedicator of cytokinesis protein 9 OS=Homo sapiens GN=DOCK9 PE=1 SV=2 Back     alignment and function description
>sp|A2AF47|DOC11_MOUSE Dedicator of cytokinesis protein 11 OS=Mus musculus GN=Dock11 PE=1 SV=1 Back     alignment and function description
>sp|Q5JSL3|DOC11_HUMAN Dedicator of cytokinesis protein 11 OS=Homo sapiens GN=DOCK11 PE=1 SV=2 Back     alignment and function description
>sp|Q96HP0|DOCK6_HUMAN Dedicator of cytokinesis protein 6 OS=Homo sapiens GN=DOCK6 PE=1 SV=3 Back     alignment and function description
>sp|Q8VDR9|DOCK6_MOUSE Dedicator of cytokinesis protein 6 OS=Mus musculus GN=Dock6 PE=1 SV=4 Back     alignment and function description
>sp|Q8C147|DOCK8_MOUSE Dedicator of cytokinesis protein 8 OS=Mus musculus GN=Dock8 PE=1 SV=4 Back     alignment and function description
>sp|Q8R1A4|DOCK7_MOUSE Dedicator of cytokinesis protein 7 OS=Mus musculus GN=Dock7 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1372
224113875 1848 predicted protein [Populus trichocarpa] 0.991 0.735 0.831 0.0
225444565 1847 PREDICTED: dedicator of cytokinesis prot 0.992 0.737 0.842 0.0
255551315 1844 spike-1, putative [Ricinus communis] gi| 0.998 0.742 0.823 0.0
387940580 1837 spike 1 [Gossypium arboreum] 0.992 0.741 0.816 0.0
356525602 1838 PREDICTED: dedicator of cytokinesis prot 0.974 0.727 0.796 0.0
356554751 1835 PREDICTED: dedicator of cytokinesis prot 0.972 0.726 0.794 0.0
449444146 1838 PREDICTED: dedicator of cytokinesis prot 0.970 0.724 0.798 0.0
297800514 1830 hypothetical protein ARALYDRAFT_493252 [ 0.986 0.739 0.760 0.0
240255926 1830 guanyl-nucleotide exchange factor / GTPa 0.986 0.739 0.758 0.0
449493068 1833 PREDICTED: LOW QUALITY PROTEIN: dedicato 0.969 0.725 0.797 0.0
>gi|224113875|ref|XP_002316600.1| predicted protein [Populus trichocarpa] gi|222859665|gb|EEE97212.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 2479 bits (6424), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1186/1427 (83%), Positives = 1280/1427 (89%), Gaps = 67/1427 (4%)

Query: 11   HRFRRIPR--QSLAHLKLDPLIDENLEQWPHLNELVQCYRADWVKDENKYGHYESVSPPS 68
             RFR+IPR  QSL+HLKLDPL+DENLEQWPHLNELVQCYR DWVKDENKYGHYES+SP S
Sbjct: 13   QRFRKIPRHSQSLSHLKLDPLVDENLEQWPHLNELVQCYRTDWVKDENKYGHYESISPVS 72

Query: 69   FQNQIFEGPDTDIETETRLANARRGKGEDATDDDAPSTSGRQYTDAT---DVSKHFGISS 125
            FQNQIFEGPDTD+ETE  LAN+RR K E+ TDDD PSTSGRQ+ +A      + HFG S 
Sbjct: 73   FQNQIFEGPDTDLETEMHLANSRRNKAEETTDDDIPSTSGRQFVEAAFPDSSNSHFGESP 132

Query: 126  LPAYEPAFDWENERSLTFGQRLSETPMSQYGCGLKISVKVLSLSFQAGLVEPFYGTICLY 185
            LPAYEPAFDW+NERS+ FGQR+ ETP+ QY  GLKISVKVLSLSFQAGL EPFYGTIC+Y
Sbjct: 133  LPAYEPAFDWDNERSMIFGQRIPETPLPQYDSGLKISVKVLSLSFQAGLAEPFYGTICIY 192

Query: 186  NRERREKLSEDFYFRVLPAEMQDAKISYEPRGIFYLDAPSASVCLLIQLERPATEESGVT 245
            N+ERREKLSEDFYF V+P + QDAKIS++PRGIFYLDAPS+S+CLLIQLE+PATEE GVT
Sbjct: 193  NKERREKLSEDFYFSVVPTDTQDAKISHDPRGIFYLDAPSSSICLLIQLEKPATEEGGVT 252

Query: 246  PSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAIVPLFDNSIGAVSGGSASPSSPLA 305
             SVYSRKEPVHL+EREKQKLQVWSRIMPY+ESFAW IVPLFDNSI A SGG+ASPSSPLA
Sbjct: 253  ASVYSRKEPVHLSEREKQKLQVWSRIMPYKESFAWTIVPLFDNSIAATSGGAASPSSPLA 312

Query: 306  PSVSGSSSHEGVFEPISKITLDGKLGYSGGSSVIVEISNLNKVKECYTEESLQDPKRKVH 365
            PSVSGSSSH+GVFEP++KITLDGKLGYS GSSV+VEISNLNKVKE YTE+SLQDPKRKVH
Sbjct: 313  PSVSGSSSHDGVFEPVAKITLDGKLGYSSGSSVVVEISNLNKVKESYTEDSLQDPKRKVH 372

Query: 366  KPVKGVLRLDIEKHQTAHADLENISESGSVTNDSIDPGDRATDLTFSKCPSNGSDVPQTS 425
            KPVKGVLRL+IEKHQTAHA+LEN+SE+GS+TNDSID GDR  D  F+K PSNG D PQTS
Sbjct: 373  KPVKGVLRLEIEKHQTAHAELENLSETGSITNDSIDLGDRVADSAFTKSPSNGFDDPQTS 432

Query: 426  NSKWSYGDGKEISGNGSNA---PDFSADDFQAFDFRTTTRNEPFLQLFHCLYVYPSSVSL 482
             SKW+  DGKE SGN SNA   PDF+ADDFQAFDFRTTTRNEPFLQLFHCLYVYP +VSL
Sbjct: 433  GSKWNIFDGKETSGNISNARENPDFTADDFQAFDFRTTTRNEPFLQLFHCLYVYPLTVSL 492

Query: 483  SRKRNLFIRVELRKDDADVRRQPLEAIHPREPGVSLQKWAHTQVAVGARMAYYHDEIKVS 542
            SRKRNLFIRVELRKDD DVRRQPLEA+HPREPG SLQKWAHTQVA G R+A YHDEIK+S
Sbjct: 493  SRKRNLFIRVELRKDDVDVRRQPLEAMHPREPGTSLQKWAHTQVAAGTRVACYHDEIKLS 552

Query: 543  LPAVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLPIIKELVPH 602
            LPA+WTP HHLLFTFFHVDLQTKLEAPKPVVIGYA LPLSTHAQLRSEISLPI++ELVPH
Sbjct: 553  LPAIWTPSHHLLFTFFHVDLQTKLEAPKPVVIGYAVLPLSTHAQLRSEISLPIMRELVPH 612

Query: 603  YLQETGKERLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELL 662
            YLQE GKERLDYLEDGKN F+LRLRLCSSLYPINERIRDFF+EYDRHTLRTSPPWGSELL
Sbjct: 613  YLQEMGKERLDYLEDGKNVFRLRLRLCSSLYPINERIRDFFIEYDRHTLRTSPPWGSELL 672

Query: 663  EAINSLKNVDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDDAE 722
            EAINSLKNVDSTALLQFLHP+LNMLLHLIG+GGETLQVAAFRAMVNILTRVQQESVDD E
Sbjct: 673  EAINSLKNVDSTALLQFLHPILNMLLHLIGSGGETLQVAAFRAMVNILTRVQQESVDDTE 732

Query: 723  RNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLE 782
            RNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLE
Sbjct: 733  RNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLE 792

Query: 783  LIVKSMALEQTRLFFHGLPLGEDIPPMQLRDGVFRCVMQLYDCLLTEVHERCKKGLSLAK 842
            LIVKSMALEQ RLF+H LPLGED+PPMQL++GVFRC+MQLYDCLLTEVHERCKKGLSLAK
Sbjct: 793  LIVKSMALEQARLFYHSLPLGEDVPPMQLKEGVFRCIMQLYDCLLTEVHERCKKGLSLAK 852

Query: 843  RLNSSLGFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVCDHDLYVE 902
            RLNSSL FFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKL FLQI+CDHDL+VE
Sbjct: 853  RLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLTFLQIICDHDLFVE 912

Query: 903  MPGRDPSDRNYLSSVLIQEVFLTWDHDDLSQRAKAARILVVLLCKHEFDARYQKPEDKLY 962
            MPGRDPSDRNYL+SVLIQE+FLTWDHD+LSQR+KAARILVVLLCKHEFDARYQKPEDKLY
Sbjct: 913  MPGRDPSDRNYLASVLIQELFLTWDHDELSQRSKAARILVVLLCKHEFDARYQKPEDKLY 972

Query: 963  IAQLYFPLIGQILDEMPVFYNLNAVEKREVLIVVMEIVRNLDDASLVKAWQQSIARTRLF 1022
            IAQLYFPL+GQILDEMPVFYNLNAVEKREVLIV+++I+RNLDD SLVKAWQQSIARTRLF
Sbjct: 973  IAQLYFPLVGQILDEMPVFYNLNAVEKREVLIVILQIMRNLDDTSLVKAWQQSIARTRLF 1032

Query: 1023 FKLMEECLILFEHRKPADGMLLGASSRSPVGEGPSSPKYSDRLSPSINNYLSEASRQEVR 1082
            FKLMEECL+LFEHRKPADG+L+G+SSRSPVG+GP+SPKYSDRLSP+INNYLSEASRQEVR
Sbjct: 1033 FKLMEECLVLFEHRKPADGILMGSSSRSPVGDGPASPKYSDRLSPAINNYLSEASRQEVR 1092

Query: 1083 E--------LWE------------------------------------------------ 1086
                     LW+                                                
Sbjct: 1093 PQGKTDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLEL 1152

Query: 1087 --ENLSAAVSLQVLEITEKFCMMAASHSIATDYGKLDCITAIIMSFFSRNQPVAFWKAFF 1144
              ENLSAAVSLQVLEITEKF MMAASHSIATDYGKLDC+TAI  SFFSRNQP++FWKA F
Sbjct: 1153 WEENLSAAVSLQVLEITEKFSMMAASHSIATDYGKLDCLTAIFTSFFSRNQPLSFWKALF 1212

Query: 1145 PVFNRICDLHGATLMARENDRFLKQVAFHLLRLAVFRNVSIRKRAVIGLQILVRSSF-YF 1203
            PVFN + DLHGATLMARENDRFLKQVAFHLLRLAVFRN S++KRAVIGLQILVRS+F YF
Sbjct: 1213 PVFNNVFDLHGATLMARENDRFLKQVAFHLLRLAVFRNESVKKRAVIGLQILVRSAFYYF 1272

Query: 1204 MQTARLRVMLTITLSELMSDVQVTQMKSDGTLEESGEARRLRKSLEEMADEARSPSQFRE 1263
            MQTARLRVMLTITLSELMSDVQVTQMKSDG LEESGEA+RLRKSLEE+ADE ++P   RE
Sbjct: 1273 MQTARLRVMLTITLSELMSDVQVTQMKSDGMLEESGEAKRLRKSLEEVADELKTPDLLRE 1332

Query: 1264 CGLPEDALLAIPEKFTENRWSWSEVKHLSVSLLLALDASLEHSLLGSAMTMDRYAAAESF 1323
            CG+PE AL+A+P+K  +NRWSWSEVK+LS  L+LALDASLEH+LLGS MT+DRYAAAESF
Sbjct: 1333 CGVPESALVAVPKKLADNRWSWSEVKYLSDCLILALDASLEHALLGSVMTVDRYAAAESF 1392

Query: 1324 YKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQ 1370
            YKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQ
Sbjct: 1393 YKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQ 1439

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225444565|ref|XP_002277136.1| PREDICTED: dedicator of cytokinesis protein 11 [Vitis vinifera] gi|297738489|emb|CBI27734.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255551315|ref|XP_002516704.1| spike-1, putative [Ricinus communis] gi|223544199|gb|EEF45723.1| spike-1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|387940580|gb|AFK13154.1| spike 1 [Gossypium arboreum] Back     alignment and taxonomy information
>gi|356525602|ref|XP_003531413.1| PREDICTED: dedicator of cytokinesis protein 11-like [Glycine max] Back     alignment and taxonomy information
>gi|356554751|ref|XP_003545706.1| PREDICTED: dedicator of cytokinesis protein 7-like [Glycine max] Back     alignment and taxonomy information
>gi|449444146|ref|XP_004139836.1| PREDICTED: dedicator of cytokinesis protein 11-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297800514|ref|XP_002868141.1| hypothetical protein ARALYDRAFT_493252 [Arabidopsis lyrata subsp. lyrata] gi|297313977|gb|EFH44400.1| hypothetical protein ARALYDRAFT_493252 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|240255926|ref|NP_193367.7| guanyl-nucleotide exchange factor / GTPase binding / GTP binding protein [Arabidopsis thaliana] gi|18496703|gb|AAL74193.1|AF465831_1 putative guanine nucleotide exchange factor [Arabidopsis thaliana] gi|332658333|gb|AEE83733.1| guanyl-nucleotide exchange factor / GTPase binding / GTP binding protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449493068|ref|XP_004159183.1| PREDICTED: LOW QUALITY PROTEIN: dedicator of cytokinesis protein 11-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1372
TAIR|locus:2130484 1830 SPK1 "SPIKE1" [Arabidopsis tha 0.776 0.582 0.760 0.0
DICTYBASE|DDB_G0275239 2621 zizC "DOCK family protein" [Di 0.312 0.163 0.258 3.5e-44
UNIPROTKB|F1LZL6 2146 RGD1561963 "Protein RGD1561963 0.355 0.227 0.257 7.4e-44
UNIPROTKB|F1LTB1 2148 RGD1561963 "Protein RGD1561963 0.355 0.227 0.257 7.5e-44
RGD|1561963 2189 RGD1561963 "similar to Dedicat 0.355 0.222 0.257 8.6e-44
UNIPROTKB|F1LRS2 2098 Dock7 "Protein Dock7" [Rattus 0.158 0.103 0.267 2.1e-43
UNIPROTKB|F1M7V2 2128 Dock7 "Protein Dock7" [Rattus 0.158 0.101 0.267 2.4e-43
UNIPROTKB|F1LS87 2130 Dock7 "Protein Dock7" [Rattus 0.158 0.101 0.267 2.4e-43
MGI|MGI:1914549 2130 Dock7 "dedicator of cytokinesi 0.158 0.101 0.271 3e-43
UNIPROTKB|F1N3L7 2097 DOCK7 "Uncharacterized protein 0.158 0.103 0.267 8.7e-43
TAIR|locus:2130484 SPK1 "SPIKE1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 4314 (1523.7 bits), Expect = 0., Sum P(2) = 0.
 Identities = 815/1072 (76%), Positives = 915/1072 (85%)

Query:    12 RFRRIPRQSLAHLKLDPLIDENLEQWPHLNELVQCYRADWVKDENKYGHYESVSPPSFQN 71
             RFR++PRQ LA  KLDPL+DENLEQWPHLN+LVQCY  +WVKD NKYGHYE++ P SFQ 
Sbjct:     9 RFRKLPRQPLALPKLDPLLDENLEQWPHLNQLVQCYGTEWVKDVNKYGHYENIRPDSFQT 68

Query:    72 QIFEGPDTDIETETRLANARRGKGEDATDDDAPSTSGRQYTDATDVSKHFGISSLPAYEP 131
             QIFEGPDTD ETE RLA+AR        ++D  S SGR ++D    SKHFG   LPAYEP
Sbjct:    69 QIFEGPDTDTETEIRLASARSA----TIEEDVASISGRPFSDPGS-SKHFGQPPLPAYEP 123

Query:   132 AFDWENERSLTFGQRLSETPMSQYGCGLKISVKVLSLSFQAGLVEPFYGTICLYNRERRE 191
             AFDWENER++ FGQR  E+P + Y  GLKISV+VLSL+FQ+GLVEPF+G+I LYN+ER+E
Sbjct:   124 AFDWENERAMIFGQRTPESPAASYSSGLKISVRVLSLAFQSGLVEPFFGSIALYNQERKE 183

Query:   192 KLSEDFYFRVLPAEMQDAKISYEPRGIFYLDAPSASVCLLIQLERPATEESGVTPSVYSR 251
             KLSEDFYF++ P EMQDAK+S E RG+FYLDAPSASVCLLIQLE+ ATEE GVT SVYSR
Sbjct:   184 KLSEDFYFQIQPTEMQDAKLSSENRGVFYLDAPSASVCLLIQLEKTATEEGGVTSSVYSR 243

Query:   252 KEPVHLTEREKQKLQVWSRIMPYRESFAWAIVPLFDNXXXXXXXXXXXXXXXXXXXXXXX 311
             KEPVHLTEREKQKLQVWSRIMPYRESFAWA+VPLFDN                       
Sbjct:   244 KEPVHLTEREKQKLQVWSRIMPYRESFAWAVVPLFDNNLTTNTGESASPSSPLAPSMTAS 303

Query:   312 XXHEGVFEPISKITLDGKLGYSGGSSVIVEISNLNKVKECYTEESLQDPKRKVHKPVKGV 371
               H+GV+EPI+KIT DGK GYSGGSSV+VEISNLNKVKE Y+EES+QDPKRKVHKPVKGV
Sbjct:   304 SSHDGVYEPIAKITSDGKQGYSGGSSVVVEISNLNKVKESYSEESIQDPKRKVHKPVKGV 363

Query:   372 LRLDIEKHQTAHADLENISESGSVTNDSIDPGDRATDLTFSKCPSNGSDVPQTSNSKWSY 431
             LRL+IEKH+  H D E++SE+GS+ NDS+DP DR +DLT  KCPS+ S  P+   SKW+ 
Sbjct:   364 LRLEIEKHRNGHGDFEDLSENGSIINDSLDPTDRLSDLTLMKCPSSSSGGPRNGCSKWNS 423

Query:   432 GDGKEISGN-GSNXXXXXXXXXXXXXXRTTTRNEPFLQLFHCLYVYPSSVSLSRKRNLFI 490
              D K++S N  S+               +TTRNEPFL LFHCLYVYP +V+LSRKRN FI
Sbjct:   424 EDAKDVSRNLTSSCGTPDLNCYHAFDFCSTTRNEPFLHLFHCLYVYPVAVTLSRKRNPFI 483

Query:   491 RVELRKDDADVRRQPLEAIHPREPGVSLQKWAHTQVAVGARMAYYHDEIKVSLPAVWTPM 550
             RVELRKDD D+R+QPLEAI+PREPGVSLQKW HTQVAVGAR A YHDEIKVSLPA WTP 
Sbjct:   484 RVELRKDDTDIRKQPLEAIYPREPGVSLQKWVHTQVAVGARAASYHDEIKVSLPATWTPS 543

Query:   551 HHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLPIIKELVPHYLQETGKE 610
             HHLLFTFFHVDLQTKLEAP+PVV+GYA+LPLST+   RS+ISLP+++ELVPHYLQE+ KE
Sbjct:   544 HHLLFTFFHVDLQTKLEAPRPVVVGYASLPLSTYIHSRSDISLPVMRELVPHYLQESTKE 603

Query:   611 RLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKN 670
             RLDYLEDGKN FKLRLRLCSSLYP NER+RDF LEYDRHTL+T PPWGSELL+AINSLK+
Sbjct:   604 RLDYLEDGKNIFKLRLRLCSSLYPTNERVRDFCLEYDRHTLQTRPPWGSELLQAINSLKH 663

Query:   671 VDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDDAERNRFLVNY 730
             VDSTALLQFL+P+LNMLLHLIGNGGETLQVAAFRAMV+ILTRVQQ S DDA+RNRFLV Y
Sbjct:   664 VDSTALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVDILTRVQQVSFDDADRNRFLVTY 723

Query:   731 VDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMAL 790
             VDY+FDDFGG QPPVYPGL+TVWGSLARSKAKGYRVGPVYDDVL+MAWFFLELIVKSMAL
Sbjct:   724 VDYSFDDFGGNQPPVYPGLATVWGSLARSKAKGYRVGPVYDDVLSMAWFFLELIVKSMAL 783

Query:   791 EQTRLFFHGLPLGEDIPPMQLRDGVFRCVMQLYDCLLTEVHERCKKGLSLAKRLNSSLGF 850
             EQ RL+ H LP GED+PPMQL++ VFRC+MQL+DCLLTEVHERCKKGLSLAKRLNSSL F
Sbjct:   784 EQARLYDHNLPTGEDVPPMQLKESVFRCIMQLFDCLLTEVHERCKKGLSLAKRLNSSLAF 843

Query:   851 FCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQIVCDHDLYVEMPGRDPSD 910
             FCYDLL IIEP QV+ELVSLY+DKFSGVCQSVLH+CKL FLQI+ DHDL+VEMPGRDPSD
Sbjct:   844 FCYDLLYIIEPCQVYELVSLYMDKFSGVCQSVLHECKLTFLQIISDHDLFVEMPGRDPSD 903

Query:   911 RNYLSSVLIQEVFLTWDHDDLSQRAKAARILVVLLCKHEFDARYQKPEDKLYIAQLYFPL 970
             RNYLSS+LIQE+FL+ DHD+L  RAK ARILV+LLCKHEFDARYQK EDKLYIAQLYFP 
Sbjct:   904 RNYLSSILIQELFLSLDHDELPLRAKGARILVILLCKHEFDARYQKAEDKLYIAQLYFPF 963

Query:   971 IGQILDEMPVFYNLNAVEKREVLIVVMEIVRNLDDASLVKAWQQSIARTRLFFKLMEECL 1030
             +GQILDEMPVFYNLNA EKREVLI V++IVRNLDD SLVKAWQQSIARTRL+FKLMEECL
Sbjct:   964 VGQILDEMPVFYNLNATEKREVLIGVLQIVRNLDDTSLVKAWQQSIARTRLYFKLMEECL 1023

Query:  1031 ILFEHRKPADGMLLGASSRSPVGEGPSSPKYSDRLSPSINNYLSEASRQEVR 1082
             ILFEH+K AD +L G +SR PV EG  SPKYS+RLSP+INNYLSEASRQEVR
Sbjct:  1024 ILFEHKKAADSILGGNNSRGPVSEGAGSPKYSERLSPAINNYLSEASRQEVR 1075
GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA
GO:0005525 "GTP binding" evidence=IEA
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0051020 "GTPase binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA;IDA
GO:0016192 "vesicle-mediated transport" evidence=IMP
GO:0019898 "extrinsic to membrane" evidence=IDA
GO:0070971 "endoplasmic reticulum exit site" evidence=IDA
GO:0000226 "microtubule cytoskeleton organization" evidence=RCA
GO:0000911 "cytokinesis by cell plate formation" evidence=RCA
GO:0006084 "acetyl-CoA metabolic process" evidence=RCA
GO:0007020 "microtubule nucleation" evidence=RCA
GO:0009855 "determination of bilateral symmetry" evidence=RCA
GO:0010014 "meristem initiation" evidence=RCA
GO:0010073 "meristem maintenance" evidence=RCA
GO:0010075 "regulation of meristem growth" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
DICTYBASE|DDB_G0275239 zizC "DOCK family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1LZL6 RGD1561963 "Protein RGD1561963" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LTB1 RGD1561963 "Protein RGD1561963" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|1561963 RGD1561963 "similar to Dedicator of cytokinesis protein 10 (Protein zizimin 3)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LRS2 Dock7 "Protein Dock7" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1M7V2 Dock7 "Protein Dock7" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LS87 Dock7 "Protein Dock7" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1914549 Dock7 "dedicator of cytokinesis 7" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1N3L7 DOCK7 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00016346001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (1844 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00030153001
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (1380 aa)
   •• • 0.628
GSVIVG00026738001
SubName- Full=Chromosome chr4 scaffold_39, whole genome shotgun sequence; (990 aa)
   •  • 0.414

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1372
pfam14180178 pfam14180, DOCK_C2, GTP-GDP exchange factor 8e-45
pfam14429179 pfam14429, DOCK-C2, C2 domain in Dock180 and Zizim 1e-44
cd08679178 cd08679, C2_DOCK180_related, C2 domains found in D 5e-39
cd08696179 cd08696, C2_Dock-C, C2 domains found in Dedicator 1e-19
cd08697185 cd08697, C2_Dock-D, C2 domains found in Dedicator 1e-19
cd11684 392 cd11684, DHR2_DOCK, Dock Homology Region 2, a GEF 1e-04
cd11703 473 cd11703, DHR2_DOCK7, Dock Homology Region 2, a GEF 0.003
>gnl|CDD|222580 pfam14180, DOCK_C2, GTP-GDP exchange factor Back     alignment and domain information 
 Score =  159 bits (405), Expect = 8e-45
 Identities = 68/177 (38%), Positives = 100/177 (56%), Gaps = 8/177 (4%)

Query: 470 FHCLYVYPSSVSLSR-----KRNLFIRVELRKDDADVRRQPLEAIHPREPGVSLQKWAHT 524
            + LYVYP S+  S+      RN+ + VELR  D +V  + L  I+ R  G SL   A +
Sbjct: 3   RNDLYVYPKSLKFSKQPKSKARNIVVTVELRDSDGEVLEEGLPIIYNRSSGPSLVSSAFS 62

Query: 525 QVAVGARMAYYHDEIKVSLPAVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTH 584
            V+   +   ++DE K+ LP   TP HHLLFTF+HV ++ K +  +   IGYA LPL   
Sbjct: 63  SVSYHNKNPQFNDEFKLQLPLDLTPGHHLLFTFYHVSVKKKKKKVET-PIGYAFLPLLDK 121

Query: 585 -AQLRS-EISLPIIKELVPHYLQETGKERLDYLEDGKNAFKLRLRLCSSLYPINERI 639
              +R  E +LP+ KEL P YL E+    + +L++GK  FK+  RLCS++Y  +  +
Sbjct: 122 GGFIRDGEHTLPVYKELPPGYLSESTSPNMKWLDNGKPVFKVSTRLCSTVYTQDPTL 178

Dock proteins are atypical GTP-GDP exchange factors for the small GTPases Pac and Cdc42, and are implicated in biological roles related to cell-migration and phagocytosis. Length = 178
>gnl|CDD|222746 pfam14429, DOCK-C2, C2 domain in Dock180 and Zizimin proteins Back     alignment and domain information
>gnl|CDD|176061 cd08679, C2_DOCK180_related, C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins Back     alignment and domain information
>gnl|CDD|176078 cd08696, C2_Dock-C, C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins Back     alignment and domain information
>gnl|CDD|176079 cd08697, C2_Dock-D, C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins Back     alignment and domain information
>gnl|CDD|212566 cd11684, DHR2_DOCK, Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins Back     alignment and domain information
>gnl|CDD|212576 cd11703, DHR2_DOCK7, Dock Homology Region 2, a GEF domain, of Class C Dedicator of Cytokinesis 7 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1372
KOG1997 1518 consensus PH domain-containing protein [Signal tra 100.0
cd08696179 C2_Dock-C C2 domains found in Dedicator Of CytoKin 100.0
cd08697185 C2_Dock-D C2 domains found in Dedicator Of CytoKin 100.0
PF14429184 DOCK-C2: C2 domain in Dock180 and Zizimin proteins 100.0
cd08679178 C2_DOCK180_related C2 domains found in Dedicator O 100.0
cd08694196 C2_Dock-A C2 domains found in Dedicator Of CytoKin 100.0
cd08695189 C2_Dock-B C2 domains found in Dedicator Of CytoKin 100.0
KOG1998 1548 consensus Signaling protein DOCK180 [Signal transd 99.92
KOG19971518 consensus PH domain-containing protein [Signal tra 99.84
PF1187898 DUF3398: Domain of unknown function (DUF3398); Int 99.3
PF00792142 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: I 92.05
cd04013146 C2_SynGAP_like C2 domain present in Ras GTPase act 86.67
cd08408138 C2B_Synaptotagmin-14_16 C2 domain second repeat pr 85.79
cd08384133 C2B_Rabphilin_Doc2 C2 domain second repeat present 85.55
cd00276134 C2B_Synaptotagmin C2 domain second repeat present 83.35
>KOG1997 consensus PH domain-containing protein [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-98  Score=936.40  Aligned_cols=856  Identities=19%  Similarity=0.156  Sum_probs=683.9

Q ss_pred             cccccCCCCCCCccccceEEEEeccceecc----ccceEEEEEEEeCCccccCCcccccccCCCCCCCceeEEEEEEecC
Q 000651          455 FDFRTTTRNEPFLQLFHCLYVYPSSVSLSR----KRNLFIRVELRKDDADVRRQPLEAIHPREPGVSLQKWAHTQVAVGA  530 (1372)
Q Consensus       455 ~ef~~~~~~~P~t~yrN~LYVYP~~lnFsk----aRNI~V~Vq~r~~D~~~~~~~L~~Iygk~~~~~f~~~~~SsV~yHn  530 (1372)
                      +||+..+++.|++.|||.||+||..++|..    ++||.++++.+-..  +.+..+++++|++.++++....+|+|.||+
T Consensus        17 Lef~~~E~~~~~~~yR~~Ld~q~~~lqf~~~~n~a~ni~~~~~~~~~e--~~~~~~~v~~~~st~~~~lq~~~t~v~~~d   94 (1518)
T KOG1997|consen   17 LEFPAREVIFPHTFYRNLLDVQPACLQFQILVNSAENILTRDQTMPVE--DAGIRRPVIFGKSTLREFLQEPPTTVNYHD   94 (1518)
T ss_pred             cccCCccccccchhhhhHHhhhhHHHHHHHHhhhhhhhhhhhhhchhh--hhccchhhhHHHhhhHHHhccCCccccccc
Confidence            677888999999999999999999999964    69999999666544  456788999999999999999999999999


Q ss_pred             CCCcccceEEEecCCCCCCCceEEEEEEEeeccccCCCCCceeEEEEEeccccCCcccc-eeeEEEeec-CCccccccc-
Q 000651          531 RMAYYHDEIKVSLPAVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRS-EISLPIIKE-LVPHYLQET-  607 (1372)
Q Consensus       531 k~P~F~DEIKI~LP~~L~~~hHLLFTFyHvs~~~K~~~~~et~vGYAwLPLl~~grL~~-e~~LPV~~~-lpp~YL~~~-  607 (1372)
                      ++|+||++.++.+|+....+||++|+|||++|+++.++-.+++.|+.|+|++...++.. ..++||+.. .++.|.... 
T Consensus        95 ~S~~~~~s~l~~lda~sl~nlh~~fv~yl~~sq~~~~~~~et~~~n~~~~~~i~~el~~q~~~~k~~lfn~k~~ys~mi~  174 (1518)
T KOG1997|consen   95 KSIEFYESRLLSLDAKSLAKLHLLFVFYLTSSQQHPGAIAETPKPNLWLLLLIRHELSLQSDNLKVKLFNCKDRYSKMII  174 (1518)
T ss_pred             ccHHHHhhhhhcCCchHHHHHHHHHHhhccccccchhhhhhcccccccchhhHHHHhhhcccCCCccccCCChhhhhhcc
Confidence            99999999999999999999999999999999999888889999999999997666655 677777664 567885432 


Q ss_pred             --cccccccccCCcceEEEEEEeeccccccchHHHHHHhhhhhccccCC-C-----------CChhHHHHHHHhhhcCCh
Q 000651          608 --GKERLDYLEDGKNAFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTS-P-----------PWGSELLEAINSLKNVDS  673 (1372)
Q Consensus       608 --~~p~~kwvd~~K~~F~V~t~lvSTv~TQD~~L~~Ff~~~~~~~~~t~-~-----------~~~~eL~~~l~~L~~v~~  673 (1372)
                        ..+.+.|+   |+.|++....+|+|++||+++.+||..++... ... |           +.+.++.-+........+
T Consensus       175 ~~~~~~~~~~---r~~f~~~~~~l~sV~~~D~~~sk~f~~~~~~~-~~a~p~~ll~~~~se~~d~~e~~lS~~~~~~g~p  250 (1518)
T KOG1997|consen  175 PVYNSVGTWA---RGPFNPELIPLSSVHPQDPYLSKFFTALHSLE-QNAFPHRLLTNLLSELPDANELRLSFARTREGIP  250 (1518)
T ss_pred             ccccccccee---ccccccccccceecCcCCcccCcceeeeeecc-CccchhhhhhhhhhhhccccccccchhhhhccCc
Confidence              24678998   89999999999999999999999999986543 211 0           012233344555667778


Q ss_pred             HHHHHhHHHHHHHHHHHHhcC----C--cchhHHHHHHHHHHHHhhcc---cCcchhhhchhHHhHHhhhccCCCCCC--
Q 000651          674 TALLQFLHPVLNMLLHLIGNG----G--ETLQVAAFRAMVNILTRVQQ---ESVDDAERNRFLVNYVDYAFDDFGGRQ--  742 (1372)
Q Consensus       674 ~~lv~FLp~ILd~Lf~ll~~~----~--~~~~~~aF~~Lv~Ii~~v~~---~~~d~~~r~~vL~sYI~y~F~~~~~~~--  742 (1372)
                      +..++|+|..++++..+..+.    +  ...+.++|++...+++..+.   .+++.++.++....|.+|.|..+....  
T Consensus       251 Er~~~f~~~~lfav~~l~~~pv~Ia~~e~~l~~n~t~~~e~lik~~h~sK~as~n~k~~~c~~s~ig~Y~~plaw~ar~l  330 (1518)
T KOG1997|consen  251 ERLLKFLHQDLFAVVHLHFRPVLIAGIEAVLQGNITESDEPLIKLSHNSKAASSNLKGSKCTESPIGHYRMPLAWAARPL  330 (1518)
T ss_pred             hhhhhccchhhhhcccccccceEEEeeeeecccccccccchhhccCchhhhhhhhcccccccCCcccceecccccccCCC
Confidence            999999999999998875542    2  23456788887777777664   445678899999999999997653211  


Q ss_pred             -----CCC---------CCC----chhHHHHHHhhh----h---------------------------------------
Q 000651          743 -----PPV---------YPG----LSTVWGSLARSK----A---------------------------------------  761 (1372)
Q Consensus       743 -----~~~---------y~~----L~~~~~~L~rs~----~---------------------------------------  761 (1372)
                           +++         |..    .+.....+.+..    .                                       
T Consensus       331 ~~D~ap~~~~~a~~~hLls~~ssn~~s~~is~~~~d~~SPp~~~~~~~~sde~ls~V~~~kll~~t~~~ms~~l~~~sn~  410 (1518)
T KOG1997|consen  331 PVDGAPPALLDARNMHLLAFLSSNFASLCISLSNKDEQSPPKGYGVGIASDDLLSMVEFFLLLIVTPFALSRALYYDSNA  410 (1518)
T ss_pred             CcCCCCccccccchhhhhhhcchhHHHHHHHHHhccccCCcccccCCccchhhhhhhhhHHHHhhhhHHHHHHHhccCCC
Confidence                 111         100    000001111110    0                                       


Q ss_pred             ---------------ccCccCccHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccchhHHHHHHHHHHHH
Q 000651          762 ---------------KGYRVGPVYDDVLAMAWFFLELIVKSMALEQTRLFFHGLPLGEDIPPMQLRDGVFRCVMQLYDCL  826 (1372)
Q Consensus       762 ---------------~~~~~~~~~~~~lk~sWFfFelIvKSMal~~~~~~~~~~~r~~rfp~~~f~d~F~~~i~~Lv~~l  826 (1372)
                                     ......+.++...|++|+|++...+||+.+.......+.|+..|+     .+++++++.+++...
T Consensus       411 Pte~~~~~~~~~~~qn~~~~~~~~~~~~k~a~s~~~~~~~s~~~~iy~~~~r~~p~~~r~-----~~~~~~~~~~~v~~~  485 (1518)
T KOG1997|consen  411 PTEEDKKIVERCIMQNVDCLLTERHERCKKALSFAKRQNSSLAFTIYHLLCRIEPCKLRE-----LVSLLDDKTSEVLES  485 (1518)
T ss_pred             CcchHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchhhccc-----chhhhhhhhHHHHHH
Confidence                           000122346777899999999999999997665555577887555     478889999988887


Q ss_pred             HHHHHhhhccchHHHHHHHhhHHHHHHhhhcccChhHHHHHHHHHHhhccCCC-----cchhhHhHHHHHHHHhcCCccc
Q 000651          827 LTEVHERCKKGLSLAKRLNSSLGFFCYDLLSIIEPRQVFELVSLYLDKFSGVC-----QSVLHDCKLIFLQIVCDHDLYV  901 (1372)
Q Consensus       827 ~~~I~~r~~~~~~~a~~lN~slA~Fl~dLlsimDRgfVf~LI~~Y~~~~~~~~-----~~~L~~lKldFLriIcshEhfi  901 (1372)
                      +.++..+..+..+.+...|.+.|+|++|+++.++++|||.+++.+...+..+-     ...+..++++|++|+|.|+|++
T Consensus       486 ~~~l~~~~i~l~~~~~~~~~~~a~~~~~~~s~~~~~~v~~~~r~~~~~l~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~  565 (1518)
T KOG1997|consen  486 TLKLGFKQIILDHDLEVEMPRRAFSLRNYLSSILIQFVFLSLRHDESPLRAKGARILVILSLLDEFFLRLEILCGHEHIV  565 (1518)
T ss_pred             HhhhcccccccHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhhhcchh
Confidence            76666666667777889999999999999999999999999999999886432     2468899999999999999999


Q ss_pred             ccCCC----------------CC----------------------CCCcccHHHHHHHHHhhccCC---CHHHHHHHHHH
Q 000651          902 EMPGR----------------DP----------------------SDRNYLSSVLIQEVFLTWDHD---DLSQRAKAARI  940 (1372)
Q Consensus       902 ~lp~~----------------~p----------------------~~rHFL~glLl~el~~~L~~e---~~~lr~kAi~~  940 (1372)
                      +++.+                .+                      ..+|+++|..+.|++..+...   ...++.++.+.
T Consensus       566 ~l~lp~~~~~~~~~~~~~s~~~~~~~~~~~~~~kiv~~l~~ts~v~~q~~~~g~~~l~~~~~~~~~~e~~~~~~ils~s~  645 (1518)
T KOG1997|consen  566 QLNLPFVNQILKEMPVSNSLGATESREVLTGVLKIVRNLDDTSLVKAQQQSIGSTFLEFKLMEEPFEEKKSLDSILSDSN  645 (1518)
T ss_pred             hcccccccccchhcccCccccccceeccccchHHHHHHHHhhhHHHHHHHHhhhHHHHHHHHhhhhhhhHHHHHHhhccc
Confidence            86210                00                      148899999999998887632   24577788888


Q ss_pred             HHHHHhhhcCCccCCChhHHHHHHHHHHHHHHHHHhhcccccc-------------------------------------
Q 000651          941 LVVLLCKHEFDARYQKPEDKLYIAQLYFPLIGQILDEMPVFYN-------------------------------------  983 (1372)
Q Consensus       941 L~~LL~kHd~D~Ryq~~~~k~rIA~LYlPLl~illd~~~~l~~-------------------------------------  983 (1372)
                      .++++++|++||||.+..+|++||.||.|.+..+.++.+.+..                                     
T Consensus       646 ~~~~l~~~a~~pry~~~~~k~~~~~ls~~~l~~~~~~t~~l~~~~~~~~k~~~~~~l~~~~~~~~~~~g~~~~~va~~~~  725 (1518)
T KOG1997|consen  646 SRGLLSGHALDPRYVERTSKARIAYLSAPRLTFARDTTHTLLLSFLGDLKDTLTGSLDSHELKLRDVNGSMPPEVALQLE  725 (1518)
T ss_pred             cccccccCCCCchhhhccccccchhhhhhHHhhhhhcchhhhhhhcccccccccccccchhhhhcccccccChhhhhccC
Confidence            9999999999999999999999999999999999998876531                                     


Q ss_pred             -----------------------CChhhHhHHHHHHHHHHHhCChhHHHHHHHhhh-hhHHHHHHHHHHHHhhccccCCc
Q 000651          984 -----------------------LNAVEKREVLIVVMEIVRNLDDASLVKAWQQSI-ARTRLFFKLMEECLILFEHRKPA 1039 (1372)
Q Consensus       984 -----------------------l~~~e~r~LL~CfLwILKn~d~~~Ll~~W~~~~-~~~~~fl~lL~~cl~~FeY~gk~ 1039 (1372)
                                             ++.+++|++++|.+||+|+++++.+.+||.+.. .+...++.||+.|+-+|+|.|++
T Consensus       726 ~~~~~~~~~~~~~~~~~~~~s~~l~~e~i~~~l~c~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~ll~l~v~~f~~~~~~  805 (1518)
T KOG1997|consen  726 GTPLNGYLWQASGKSLPVPSSNYLLREEIRQLLICRLGISKQALRRSLHRIWTQKLELDLENLLALLELCVLVFRYNGKK  805 (1518)
T ss_pred             CCCcCCCchhhhcCCCCCCCcchhhHHHHHHHHHHHHHHHHhcchhhccchhhccChhhHHHHHHHHHHHHhhhhhcchh
Confidence                                   457899999999999999999998888777765 46889999999999999999998


Q ss_pred             ccc----------------ccccCCCCCCCCCCCCCCccc--cCCcCccccccc-------ccHHHHHHHHHhhhhHHHH
Q 000651         1040 DGM----------------LLGASSRSPVGEGPSSPKYSD--RLSPSINNYLSE-------ASRQEVRELWEENLSAAVS 1094 (1372)
Q Consensus      1040 ~~~----------------l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------~~~~e~~~~~e~nlstEv~ 1094 (1372)
                      +..                +.+.+.+.....+.+ .+..+  ++++...+|.+.       ...+..+++.++|+|+||.
T Consensus       806 a~~~~~s~~~~k~~~l~~~l~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~t~~~~~~e~~~~~~ls~E~~  884 (1518)
T KOG1997|consen  806 AASRNISLDFGKLDCLKTRLRGFFSRLIRTRAEM-KRRNEPLRFSKEFFPAFNATFDLHGTKGTTLLEALQATNLSQEVL  884 (1518)
T ss_pred             hhhHHHhhhhHHHHHHHHHHHHHHHhhhhcchhh-hhccccchhHHHHHHHhcCCcCCccchhhhhHHHHHHhHHHHHHH
Confidence            431                111111111100000 01111  222332222211       1123557899999999999


Q ss_pred             HHHHHHHHHHHHHhhccccccccCCchhHHHHHHhhhcCCChHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHH
Q 000651         1095 LQVLEITEKFCMMAASHSIATDYGKLDCITAIIMSFFSRNQPVAFWKAFFPVFNRICDLHGATLMARENDRFLKQVAFHL 1174 (1372)
Q Consensus      1095 l~vLd~le~~~~~~~~~~~~~~~~~l~~v~~vll~~L~~~QS~~~l~~~fa~~r~~v~kf~~~Lf~~~~~~~c~~l~~~l 1174 (1372)
                      ++|+|+.+.|++.+..  ....+..+++++++++++|.++||+++++|+||++|+++.|||+++|+.++++ |+.+|.++
T Consensus       885 ~~v~~v~~~~~~~a~~--~~~~~~l~~~~~~~~~~ll~~~~se~~l~h~fA~~r~~~~kfp~l~fe~~~~~-c~~~~~q~  961 (1518)
T KOG1997|consen  885 LIVLDVAQNLIRLAAY--CDANDSLLGKALRILLNLLKSHQSETVLDHVFATLRLFALKFPDLLFEMDPEQ-CAHMLHQV  961 (1518)
T ss_pred             HHHHHHHHHHHHHHhc--cCccHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHhHHHHHcCChHH-HHHHHHHH
Confidence            9999999999998774  23334569999999999999999999999999999999999999999888875 99999999


Q ss_pred             HHhhcCCCHHHHHHHHHHHHHHHhhhc-cCCCcceehhhhHHHHHhhcccccccccccCCccccchhhHHHHHHHHHHHH
Q 000651         1175 LRLAVFRNVSIRKRAVIGLQILVRSSF-YFMQTARLRVMLTITLSELMSDVQVTQMKSDGTLEESGEARRLRKSLEEMAD 1253 (1372)
Q Consensus      1175 L~~c~S~~~svR~~A~a~LYlLmR~nf-~~~n~srvk~qvt~alS~Lv~~~~~~~~~~~~~f~~~~~~~~lr~SL~~i~~ 1253 (1372)
                      | ||.|+...+|+         ||+|| .+   +|+++|+||+++.+++.++.        +   . .+++++++++|++
T Consensus       962 l-~c~ss~~~~r~---------~~~~~~~~---~~~~~q~~~~~~~~~~~~~~--------~---~-~s~~~~~~~~l~~ 1016 (1518)
T KOG1997|consen  962 L-HCESSRLATRQ---------KRNNFEAT---SRTLLQSTISVAAAEAKSVN--------S---L-RSRLLESLRLLLA 1016 (1518)
T ss_pred             h-hhhhhhHHHHH---------HHHhcccc---hhhhhhhhhhHHHHHhhhcc--------h---H-HHhhHHHHhhhcC
Confidence            9 99999999988         99999 77   99999999999999997543        1   1 4999999999999


Q ss_pred             HhCCccccccCCCchHHHhhcccccccCccchhhhHHHHHHHHHHHHHHHhhhhcCcccccchhhhHHHHHHHHHhhcCC
Q 000651         1254 EARSPSQFRECGLPEDALLAIPEKFTENRWSWSEVKHLSVSLLLALDASLEHSLLGSAMTMDRYAAAESFYKLAMAFAPV 1333 (1372)
Q Consensus      1254 ya~~D~~~~~t~fp~qv~~l~~n~~~~~~~~~~ev~~L~~~vl~~~~~mkeh~~dpe~ml~D~~~~~eL~y~iA~~Y~~s 1333 (1372)
                      |+++|..|+.|.||+||+||++|+               .+|||++.+||||++||| |++|      |||+||+||+++
T Consensus      1017 ~~~~~~~~~~~~f~~~v~dl~~~l---------------~~~l~~t~~mk~h~~d~~-~~~d------l~y~l~~~y~~~ 1074 (1518)
T KOG1997|consen 1017 PEKEDDNRKATAFPEQVKDLLRNL---------------RTVLMATVQMKEHAMDPE-MLAD------LMYQLAKSYANS 1074 (1518)
T ss_pred             chhhcchhhhcchHHHHHHHHHHH---------------HHHHHHHHhHHHhhhCHH-HHHH------HHHHHHHhcCCC
Confidence            999999999999998866665543               246888889999999998 8889      999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccChhHHHhhHHHHHHhhhccC
Q 000651         1334 PDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQVH 1372 (1372)
Q Consensus      1334 PdLRltWL~~MA~~H~~~~~~~EAA~C~vh~AaLv~~~~ 1372 (1372)
                      ||||+|||+|||++|.++|||+||||||||+|||||||.
T Consensus      1075 p~Lr~twl~~ma~~h~~~~~~~eaa~c~~~~aali~e~l 1113 (1518)
T KOG1997|consen 1075 PDLRITWLLSMAEIHEKNGNFAEAAQCYVHAAALIAEYL 1113 (1518)
T ss_pred             hHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999983

>cd08696 C2_Dock-C C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins Back     alignment and domain information
>cd08697 C2_Dock-D C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins Back     alignment and domain information
>PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A Back     alignment and domain information
>cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins Back     alignment and domain information
>cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins Back     alignment and domain information
>cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins Back     alignment and domain information
>KOG1998 consensus Signaling protein DOCK180 [Signal transduction mechanisms] Back     alignment and domain information
>KOG1997 consensus PH domain-containing protein [Signal transduction mechanisms] Back     alignment and domain information
>PF11878 DUF3398: Domain of unknown function (DUF3398); InterPro: IPR021816 This domain is functionally uncharacterised Back     alignment and domain information
>PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2 Back     alignment and domain information
>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family Back     alignment and domain information
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16 Back     alignment and domain information
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain Back     alignment and domain information
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1372
3l4c_A220 Dedicator of cytokinesis protein 1; DOCK180, DOCK1 3e-22
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-12
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
2wm9_A 428 Dedicator of cytokinesis protein 9; polymorphism, 1e-06
2yin_A 436 DOCK2, dedicator of cytokinesis protein 2; apoptos 2e-05
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens} Length = 220 Back     alignment and structure
 Score = 95.8 bits (238), Expect = 3e-22
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 35/192 (18%)

Query: 473 LYVYPSSVSLSRK-----RNLFIRVELRKDDADVRRQPLEAIHPREPGVSLQKWAHTQVA 527
           +YV        +      +N+ + V +  +D          I P   G        + + 
Sbjct: 29  IYVTLVQGDFDKGSKTTAKNVEVTVSVYDEDGKR---LEHVIFPG-AGDEAISEYKSVIY 84

Query: 528 VGARMAYYHDEIKVSLPAVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQL 587
              +   + + +KV++P       HL FTF H   Q   +  + +    A + L  +   
Sbjct: 85  YQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIF-ALAFVKLMRYDGT 143

Query: 588 R---SEISLPIIK------ELVPHYLQ----------------ETGKERLDYLEDGKNAF 622
                E  L + K      E    YL                     + L      K++F
Sbjct: 144 TLRDGEHDLIVYKAEAKKLEDAATYLSLPSTKAELEEKGHSATGKSMQSLGSCTISKDSF 203

Query: 623 KLRLRLCSSLYP 634
           ++   +CS+   
Sbjct: 204 QISTLVCSTKLT 215
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A* Length = 428 Back     alignment and structure
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A Length = 436 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1372
d1uowa_157 Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 92.12
d1rsya_143 Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 88.14
d2nq3a1133 E3 ubiquitin-protein ligase Itchy {Human (Homo sap 86.31
d1dqva1130 Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 85.52
d1ugka_138 Synaptotagmin IV {Human (Homo sapiens) [TaxId: 960 85.46
d2cm5a1137 C2b-domain of rabphilin {Rat (Rattus norvegicus) [ 84.51
>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptogamin I
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.12  E-value=0.24  Score=22.99  Aligned_cols=90  Identities=16%  Similarity=0.188  Sum_probs=58.4

Q ss_pred             CEEEEEECCC-EEC-----CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECC
Q ss_conf             1279971231-004-----6665389999991886324776311025888887740389899865888754612777237
Q 000651          471 HCLYVYPSSV-SLS-----RKRNLFIRVELRKDDADVRRQPLEAIHPREPGVSLQKWAHTQVAVGARMAYYHDEIKVSLP  544 (1372)
Q Consensus       471 N~LYVYP~~l-nFs-----k~RNI~V~Velr~~D~~~~~~~L~~Iygk~~~~~f~~~~~S~V~yHnk~P~F~DEIKI~LP  544 (1372)
                      +.|-|+..++ ++.     ...+..|+|.+..++.                  ......|.|.-++.+|.|+|+|...+|
T Consensus        25 ~~L~V~V~~a~~L~~~~~~~~~dpyV~v~l~~~~~------------------~~~~~kT~v~~~t~nP~wne~f~F~v~   86 (157)
T d1uowa_          25 GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGK------------------RLKKKKTTIKKNTLNPYYNESFSFEVP   86 (157)
T ss_dssp             TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTE------------------EEEEEECCCCCSCSSCEEEEEEEEECC
T ss_pred             CEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCC------------------CCCCEECCCCCCCCCCCCCCEEEEEEC
T ss_conf             99999999979713655799979069999953886------------------234501102368889636776999960


Q ss_pred             CCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEECCCC
Q ss_conf             998999529999997212555799982257999822346
Q 000651          545 AVWTPMHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLST  583 (1372)
Q Consensus       545 ~~L~~~HHLLFTFyHVs~q~K~~~~~et~vGYAwLPLl~  583 (1372)
                      ..-.+...|.|+.|+.+--.     ....+|..+++|-.
T Consensus        87 ~~~l~~~~l~i~v~d~~~~~-----~~~~iG~~~i~l~~  120 (157)
T d1uowa_          87 FEQIQKVQVVVTVLDYDKIG-----KNDAIGKVFVGYNS  120 (157)
T ss_dssp             GGGGGGCEEEEEEEECCSSS-----CCCEEEEEEEETTC
T ss_pred             HHHCCCCEEEEEECCCCCCC-----CCCEEEEEEEECCC
T ss_conf             89937638999981569888-----88466999980600
>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure