Query 000657
Match_columns 1370
No_of_seqs 406 out of 2935
Neff 7.0
Searched_HMMs 46136
Date Mon Apr 1 21:38:37 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000657.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000657hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02969 mam_aldehyde_ox alde 100.0 1E-272 2E-277 2661.1 134.3 1308 20-1370 2-1328(1330)
2 PLN02906 xanthine dehydrogenas 100.0 3E-272 6E-277 2660.4 135.4 1304 38-1359 1-1317(1319)
3 KOG0430 Xanthine dehydrogenase 100.0 7E-266 1E-270 2387.2 106.6 1242 19-1358 1-1254(1257)
4 PLN00192 aldehyde oxidase 100.0 9E-262 2E-266 2558.4 133.2 1260 18-1361 3-1339(1344)
5 PRK09800 putative hypoxanthine 100.0 6E-187 1E-191 1785.7 96.3 870 19-1353 1-955 (956)
6 TIGR03313 Se_sel_red_Mo probab 100.0 3E-184 6E-189 1763.9 93.7 865 23-1352 1-950 (951)
7 TIGR03311 Se_dep_Molyb_1 selen 100.0 1E-177 2E-182 1695.2 88.4 832 21-1348 1-847 (848)
8 TIGR02965 xanthine_xdhB xanthi 100.0 3E-154 7E-159 1471.8 79.3 734 607-1353 1-756 (758)
9 COG4631 XdhB Xanthine dehydrog 100.0 1E-153 3E-158 1295.8 51.2 735 605-1353 17-773 (781)
10 TIGR03194 4hydrxCoA_A 4-hydrox 100.0 7E-147 1E-151 1400.2 78.7 709 611-1351 1-746 (746)
11 PRK09970 xanthine dehydrogenas 100.0 7E-147 1E-151 1406.4 78.5 709 606-1353 2-755 (759)
12 TIGR03196 pucD xanthine dehydr 100.0 1E-145 3E-150 1390.1 76.1 712 606-1348 2-768 (768)
13 TIGR02416 CO_dehy_Mo_lg carbon 100.0 5E-145 1E-149 1389.5 75.8 703 615-1349 1-769 (770)
14 COG1529 CoxL Aerobic-type carb 100.0 5E-116 1E-120 1113.1 69.5 699 605-1352 4-730 (731)
15 COG4630 XdhA Xanthine dehydrog 100.0 2E-114 4E-119 948.0 32.9 475 17-566 5-482 (493)
16 TIGR02963 xanthine_xdhA xanthi 100.0 7E-110 2E-114 1004.6 48.2 463 21-561 1-466 (467)
17 PF02738 Ald_Xan_dh_C2: Molybd 100.0 4E-105 8E-110 995.9 49.1 524 747-1281 15-547 (547)
18 PRK09971 xanthine dehydrogenas 100.0 3.4E-56 7.4E-61 511.1 26.8 279 272-565 6-286 (291)
19 PRK09908 xanthine dehydrogenas 100.0 8.7E-54 1.9E-58 435.3 17.8 150 18-179 6-156 (159)
20 TIGR03193 4hydroxCoAred 4-hydr 100.0 8.1E-54 1.8E-58 431.3 16.6 146 21-179 2-148 (148)
21 TIGR03195 4hydrxCoA_B 4-hydrox 100.0 1.9E-52 4.2E-57 479.7 27.7 277 270-563 4-320 (321)
22 COG2080 CoxS Aerobic-type carb 100.0 1.8E-52 3.8E-57 419.7 16.3 150 19-180 2-152 (156)
23 TIGR03199 pucC xanthine dehydr 100.0 2.9E-51 6.2E-56 464.8 24.8 261 276-556 1-263 (264)
24 TIGR03198 pucE xanthine dehydr 100.0 6.1E-52 1.3E-56 421.9 16.6 146 20-179 3-149 (151)
25 COG1319 CoxM Aerobic-type carb 100.0 2.7E-50 5.9E-55 450.4 22.6 279 270-565 3-282 (284)
26 PRK11433 aldehyde oxidoreducta 100.0 4.3E-50 9.3E-55 427.1 18.1 152 16-180 47-214 (217)
27 PRK09799 putative oxidoreducta 100.0 3.5E-47 7.7E-52 428.2 24.9 250 272-565 4-254 (258)
28 TIGR03312 Se_sel_red_FAD proba 100.0 5.2E-46 1.1E-50 418.1 24.7 249 272-564 3-252 (257)
29 PF00941 FAD_binding_5: FAD bi 100.0 2.2E-39 4.8E-44 344.1 11.8 170 270-449 2-171 (171)
30 PF01799 Fer2_2: [2Fe-2S] bind 100.0 9.8E-31 2.1E-35 235.7 7.5 75 101-177 1-75 (75)
31 PF01315 Ald_Xan_dh_C: Aldehyd 99.9 2.1E-28 4.5E-33 241.0 9.2 107 621-728 1-111 (111)
32 PF03450 CO_deh_flav_C: CO deh 99.7 2E-17 4.3E-22 161.6 12.3 102 457-562 2-103 (103)
33 COG1529 CoxL Aerobic-type carb 99.5 3.9E-15 8.5E-20 191.1 5.5 474 601-1137 179-712 (731)
34 PRK12386 fumarate reductase ir 98.9 7.7E-10 1.7E-14 124.0 6.2 69 28-107 20-93 (251)
35 PRK05950 sdhB succinate dehydr 98.4 2.1E-07 4.6E-12 104.4 5.7 68 28-107 18-91 (232)
36 TIGR00384 dhsB succinate dehyd 98.2 8.6E-07 1.9E-11 98.8 5.0 68 28-107 15-87 (220)
37 PF13510 Fer2_4: 2Fe-2S iron-s 98.2 4E-06 8.7E-11 78.4 7.2 69 19-102 2-80 (82)
38 PRK12576 succinate dehydrogena 98.2 2.2E-06 4.8E-11 98.4 6.1 69 28-107 25-100 (279)
39 PRK12814 putative NADPH-depend 97.9 2.5E-05 5.4E-10 100.8 10.1 93 19-131 2-101 (652)
40 cd00207 fer2 2Fe-2S iron-sulfu 97.9 1.7E-05 3.6E-10 74.3 5.8 69 21-91 1-77 (84)
41 PRK08493 NADH dehydrogenase su 97.9 1.6E-05 3.6E-10 102.8 7.6 95 21-133 2-102 (819)
42 PF13085 Fer2_3: 2Fe-2S iron-s 97.9 3.6E-05 7.8E-10 75.6 7.4 67 29-106 20-93 (110)
43 PRK12385 fumarate reductase ir 97.6 9.8E-05 2.1E-09 83.4 6.8 66 28-106 25-95 (244)
44 PRK07569 bidirectional hydroge 97.6 0.00018 3.8E-09 81.1 8.4 96 19-134 2-107 (234)
45 PF00111 Fer2: 2Fe-2S iron-sul 97.5 0.0001 2.2E-09 68.1 4.6 47 23-70 1-48 (78)
46 PRK12577 succinate dehydrogena 97.4 0.00097 2.1E-08 78.8 12.7 69 28-107 19-101 (329)
47 PRK14652 UDP-N-acetylenolpyruv 97.1 0.0033 7.2E-08 73.4 12.0 157 262-447 29-191 (302)
48 PRK12436 UDP-N-acetylenolpyruv 97.1 0.0044 9.5E-08 72.6 12.7 147 270-447 37-193 (305)
49 PRK13552 frdB fumarate reducta 97.0 0.00073 1.6E-08 76.1 5.5 67 28-106 24-95 (239)
50 PRK06259 succinate dehydrogena 97.0 0.0036 7.8E-08 78.3 11.9 62 29-103 22-88 (486)
51 PRK13905 murB UDP-N-acetylenol 97.0 0.0061 1.3E-07 71.3 12.9 156 262-448 24-189 (298)
52 PRK14653 UDP-N-acetylenolpyruv 97.0 0.0039 8.5E-08 72.5 10.9 155 262-446 27-188 (297)
53 PRK13906 murB UDP-N-acetylenol 97.0 0.0096 2.1E-07 69.8 14.3 150 269-446 36-192 (307)
54 PRK07570 succinate dehydrogena 96.9 0.00079 1.7E-08 76.2 4.7 69 28-106 20-103 (250)
55 COG0479 FrdB Succinate dehydro 96.8 0.0017 3.7E-08 72.1 5.3 67 29-107 21-92 (234)
56 PRK08640 sdhB succinate dehydr 96.6 0.0017 3.6E-08 73.7 4.5 66 28-106 23-100 (249)
57 PRK12575 succinate dehydrogena 96.6 0.0031 6.8E-08 70.8 5.8 66 28-106 23-93 (235)
58 PRK07860 NADH dehydrogenase su 96.5 0.0044 9.5E-08 81.9 7.6 100 19-134 3-110 (797)
59 TIGR00179 murB UDP-N-acetyleno 96.4 0.028 6.1E-07 65.3 12.7 157 263-447 7-171 (284)
60 PLN00129 succinate dehydrogena 96.4 0.0039 8.4E-08 71.3 5.3 66 29-106 63-134 (276)
61 PTZ00305 NADH:ubiquinone oxido 96.3 0.013 2.7E-07 66.8 8.6 97 18-132 66-171 (297)
62 PRK14650 UDP-N-acetylenolpyruv 96.2 0.05 1.1E-06 63.3 12.9 157 261-448 25-191 (302)
63 PRK10713 2Fe-2S ferredoxin Yfa 96.1 0.0099 2.1E-07 56.0 5.7 48 20-70 3-50 (84)
64 TIGR02008 fdx_plant ferredoxin 96.1 0.0096 2.1E-07 57.7 5.7 43 26-70 11-53 (97)
65 TIGR01973 NuoG NADH-quinone ox 96.0 0.012 2.5E-07 75.8 7.3 93 23-134 1-103 (603)
66 PF01565 FAD_binding_4: FAD bi 96.0 0.024 5.1E-07 58.4 8.2 102 272-393 3-108 (139)
67 CHL00134 petF ferredoxin; Vali 96.0 0.015 3.2E-07 56.6 6.1 43 26-70 13-55 (99)
68 PRK09130 NADH dehydrogenase su 95.8 0.019 4E-07 74.7 8.1 94 21-133 2-105 (687)
69 PRK09129 NADH dehydrogenase su 95.8 0.013 2.8E-07 77.7 6.5 106 20-141 1-112 (776)
70 COG0277 GlcD FAD/FMN-containin 95.5 0.021 4.6E-07 70.8 6.9 103 271-393 33-139 (459)
71 PLN03136 Ferredoxin; Provision 95.3 0.026 5.7E-07 58.7 5.6 50 19-70 55-104 (148)
72 PRK14649 UDP-N-acetylenolpyruv 95.1 0.15 3.3E-06 59.5 11.8 145 262-437 14-169 (295)
73 PTZ00038 ferredoxin; Provision 95.1 0.04 8.6E-07 59.5 6.4 49 19-70 96-145 (191)
74 TIGR01676 GLDHase galactonolac 95.1 0.09 2E-06 65.7 10.2 130 271-422 63-197 (541)
75 PRK08166 NADH dehydrogenase su 95.0 0.034 7.3E-07 74.4 6.6 103 21-134 2-110 (847)
76 PRK11872 antC anthranilate dio 95.0 0.03 6.5E-07 66.9 5.6 48 21-70 3-53 (340)
77 PRK11183 D-lactate dehydrogena 94.9 0.062 1.3E-06 66.4 8.0 106 271-393 40-152 (564)
78 TIGR01678 FAD_lactone_ox sugar 94.7 0.086 1.9E-06 65.0 8.7 102 271-394 16-121 (438)
79 PRK00046 murB UDP-N-acetylenol 94.6 0.22 4.9E-06 58.9 11.5 153 262-448 14-185 (334)
80 PLN02465 L-galactono-1,4-lacto 94.2 0.26 5.6E-06 62.2 11.2 156 270-448 97-260 (573)
81 PRK13903 murB UDP-N-acetylenol 94.1 0.27 5.9E-06 58.9 10.7 154 261-447 25-192 (363)
82 PTZ00490 Ferredoxin superfamil 94.0 0.1 2.2E-06 54.1 6.1 85 19-104 34-138 (143)
83 PRK11230 glycolate oxidase sub 94.0 0.14 3.1E-06 64.2 8.6 103 271-392 57-163 (499)
84 PLN02593 adrenodoxin-like ferr 94.0 0.074 1.6E-06 53.4 4.8 48 20-69 2-51 (117)
85 TIGR01677 pln_FAD_oxido plant- 93.9 0.39 8.4E-06 60.8 12.1 107 271-395 33-144 (557)
86 TIGR02160 PA_CoA_Oxy5 phenylac 93.9 0.088 1.9E-06 63.1 6.2 51 19-70 263-313 (352)
87 TIGR01679 bact_FAD_ox FAD-link 93.8 0.27 5.9E-06 60.4 10.4 155 271-448 13-172 (419)
88 TIGR00387 glcD glycolate oxida 93.6 0.13 2.7E-06 63.3 7.0 100 274-392 2-105 (413)
89 PRK10684 HCP oxidoreductase, N 93.4 0.091 2E-06 62.6 5.1 49 20-70 248-296 (332)
90 COG0633 Fdx Ferredoxin [Energy 93.0 0.14 3.1E-06 50.1 4.8 48 23-71 7-54 (102)
91 PRK14651 UDP-N-acetylenolpyruv 93.0 0.83 1.8E-05 52.6 11.7 152 262-448 14-167 (273)
92 PRK07609 CDP-6-deoxy-delta-3,4 92.9 0.1 2.2E-06 62.3 4.6 47 20-70 4-50 (339)
93 TIGR02007 fdx_isc ferredoxin, 92.9 0.1 2.2E-06 51.9 3.8 44 23-70 11-55 (110)
94 COG0812 MurB UDP-N-acetylmuram 92.8 1.2 2.7E-05 51.3 12.8 155 263-449 15-181 (291)
95 PRK14648 UDP-N-acetylenolpyruv 92.6 0.99 2.1E-05 53.7 12.0 86 261-350 22-113 (354)
96 PRK05713 hypothetical protein; 92.0 0.2 4.2E-06 59.2 5.4 45 22-70 3-47 (312)
97 PRK05464 Na(+)-translocating N 91.8 0.18 4E-06 61.7 4.9 52 17-70 32-85 (409)
98 PLN02805 D-lactate dehydrogena 91.6 0.39 8.5E-06 60.9 7.7 101 271-392 135-239 (555)
99 TIGR01941 nqrF NADH:ubiquinone 91.1 0.24 5.2E-06 60.7 5.0 50 19-70 30-81 (405)
100 COG3383 Uncharacterized anaero 90.0 0.59 1.3E-05 58.9 6.9 94 19-133 4-106 (978)
101 COG1034 NuoG NADH dehydrogenas 89.5 0.72 1.6E-05 59.3 7.4 95 20-133 1-104 (693)
102 PRK09970 xanthine dehydrogenas 89.0 13 0.00028 49.4 18.7 191 781-974 457-737 (759)
103 PRK11282 glcE glycolate oxidas 88.0 1.3 2.9E-05 53.0 7.8 93 280-392 8-101 (352)
104 TIGR03194 4hydrxCoA_A 4-hydrox 86.8 10 0.00023 50.2 15.8 59 782-841 442-511 (746)
105 KOG2282 NADH-ubiquinone oxidor 86.3 1.2 2.6E-05 53.7 6.0 101 18-133 30-135 (708)
106 TIGR03313 Se_sel_red_Mo probab 86.2 16 0.00035 49.7 17.2 191 782-974 658-933 (951)
107 TIGR03311 Se_dep_Molyb_1 selen 85.7 9.8 0.00021 51.1 14.8 183 784-975 594-835 (848)
108 PRK13904 murB UDP-N-acetylenol 84.9 2.5 5.4E-05 48.3 7.5 143 262-448 12-156 (257)
109 PLN02441 cytokinin dehydrogena 84.5 7.7 0.00017 48.9 12.2 156 271-448 66-238 (525)
110 TIGR03196 pucD xanthine dehydr 83.0 24 0.00051 47.1 16.5 61 1052-1123 182-242 (768)
111 PLN02906 xanthine dehydrogenas 80.2 39 0.00085 47.8 17.8 191 1052-1333 740-933 (1319)
112 PLN00192 aldehyde oxidase 78.8 46 0.001 47.1 17.8 59 1052-1121 761-819 (1344)
113 TIGR01372 soxA sarcosine oxida 69.7 9.8 0.00021 52.2 7.7 80 17-106 9-98 (985)
114 TIGR02416 CO_dehy_Mo_lg carbon 68.1 11 0.00023 50.3 7.4 70 785-857 476-556 (770)
115 PRK07440 hypothetical protein; 65.3 9.2 0.0002 34.8 4.2 29 20-51 4-32 (70)
116 PF02738 Ald_Xan_dh_C2: Molybd 65.2 21 0.00046 45.6 9.1 55 1052-1117 48-102 (547)
117 PRK08053 sulfur carrier protei 64.8 13 0.00028 33.3 5.0 38 21-71 1-38 (66)
118 PRK09800 putative hypoxanthine 63.1 17 0.00036 49.5 7.8 60 782-842 662-732 (956)
119 TIGR02965 xanthine_xdhB xanthi 60.4 17 0.00037 48.3 7.2 59 783-842 446-515 (758)
120 PRK05863 sulfur carrier protei 60.0 11 0.00023 33.7 3.6 28 21-51 1-28 (65)
121 PRK06083 sulfur carrier protei 59.3 15 0.00032 34.8 4.5 33 16-51 14-46 (84)
122 COG2104 ThiS Sulfur transfer p 57.9 14 0.00031 33.4 4.0 32 19-53 1-32 (68)
123 TIGR02911 sulfite_red_B sulfit 57.5 6 0.00013 45.4 2.0 28 41-68 205-240 (261)
124 PF02594 DUF167: Uncharacteris 55.7 40 0.00086 31.4 6.6 51 1057-1107 18-68 (77)
125 PRK05659 sulfur carrier protei 54.5 15 0.00032 32.7 3.6 29 21-52 1-29 (66)
126 TIGR02969 mam_aldehyde_ox alde 51.1 28 0.00061 49.2 7.1 59 782-841 1015-1084(1330)
127 PRK00054 dihydroorotate dehydr 49.4 6.7 0.00015 44.7 0.7 31 41-71 196-231 (250)
128 cd06192 DHOD_e_trans_like FAD/ 48.3 11 0.00023 42.8 2.0 18 53-70 212-229 (243)
129 cd06221 sulfite_reductase_like 47.5 11 0.00023 43.2 1.9 28 41-68 205-240 (253)
130 PF10418 DHODB_Fe-S_bind: Iron 46.8 11 0.00024 30.4 1.4 19 53-71 2-20 (40)
131 COG2871 NqrF Na+-transporting 46.7 21 0.00045 40.8 3.9 51 18-70 34-86 (410)
132 PRK08364 sulfur carrier protei 46.3 43 0.00092 30.4 5.2 41 20-71 4-46 (70)
133 TIGR01683 thiS thiamine biosyn 44.6 37 0.00081 30.1 4.5 36 23-71 1-36 (64)
134 PRK06944 sulfur carrier protei 42.6 27 0.00059 30.9 3.4 28 21-51 1-28 (65)
135 PF08869 XisI: XisI protein; 40.4 44 0.00095 33.3 4.6 40 1055-1104 55-98 (111)
136 PRK07696 sulfur carrier protei 39.9 35 0.00076 30.7 3.6 28 21-51 1-29 (67)
137 KOG3049 Succinate dehydrogenas 38.7 13 0.00029 40.3 0.8 46 38-93 76-126 (288)
138 PF10437 Lip_prot_lig_C: Bacte 37.3 1.7E+02 0.0036 27.5 8.0 50 474-529 19-68 (86)
139 PRK08221 anaerobic sulfite red 36.9 13 0.00027 42.9 0.4 28 41-68 207-242 (263)
140 cd00565 ThiS ThiaminS ubiquiti 35.6 75 0.0016 28.2 5.0 36 23-71 2-37 (65)
141 KOG4730 D-arabinono-1, 4-lacto 34.7 49 0.0011 40.4 4.7 76 272-351 52-131 (518)
142 cd06219 DHOD_e_trans_like1 FAD 32.2 24 0.00051 40.2 1.6 31 41-71 195-230 (248)
143 PRK08345 cytochrome-c3 hydroge 31.7 27 0.00059 40.7 2.0 31 41-71 227-265 (289)
144 PRK06488 sulfur carrier protei 29.5 57 0.0012 29.0 3.2 27 21-51 1-27 (65)
145 PRK05802 hypothetical protein; 28.9 33 0.00072 40.7 2.1 20 52-71 287-306 (320)
146 PRK00647 hypothetical protein; 27.3 1.3E+02 0.0029 29.2 5.4 45 1063-1107 25-69 (96)
147 PTZ00397 macrophage migration 27.1 54 0.0012 32.7 3.0 31 1078-1108 75-105 (116)
148 cd06220 DHOD_e_trans_like2 FAD 25.7 32 0.00069 38.7 1.1 31 40-70 181-216 (233)
149 COG3894 Uncharacterized metal- 22.5 86 0.0019 38.9 3.8 47 21-72 4-51 (614)
150 PRK05090 hypothetical protein; 22.4 1.9E+02 0.0041 28.2 5.5 45 1063-1107 30-74 (95)
151 PRK01530 hypothetical protein; 21.3 1.9E+02 0.0042 28.6 5.4 44 1064-1107 38-81 (105)
152 PF06971 Put_DNA-bind_N: Putat 20.2 84 0.0018 26.8 2.3 17 966-982 32-48 (50)
No 1
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=100.00 E-value=1e-272 Score=2661.06 Aligned_cols=1308 Identities=42% Similarity=0.726 Sum_probs=1184.8
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcE
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH 98 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 98 (1370)
.|+|+|||+++++.+++|+++||+|||++ ||||||.||++|+||||||+||++|+.+|++.+++|||||+|+++++|++
T Consensus 2 ~~~~~~Ng~~~~~~~~~~~~~ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 81 (1330)
T TIGR02969 2 ELLFYVNGRKVVEKNVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYNPSTKSIRHHPVNACLTPICSLYGAA 81 (1330)
T ss_pred cEEEEECCEEEEeccCCCCCcHHHHHHhhcCCCCCCCCcCCCCCCCcEEEECCccccccccCCcEEehhHHHHHHhCCCE
Confidence 48899999998665699999999999996 99999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHH
Q 000657 99 VITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVF 178 (1370)
Q Consensus 99 i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~ 178 (1370)
|+|||||++..+.|||||+||+++|++|||||||||||++++||++++.| +++||+++|+|||||||||++|++|++++
T Consensus 82 v~TvEgl~~~~~~l~pvq~a~~~~~~~QCGfCtpG~vm~~~~ll~~~~~p-~~~~i~~~l~gnlCRCtgY~~i~~a~~~~ 160 (1330)
T TIGR02969 82 VTTVEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMSMYALLRNHPEP-TLDQLTDALGGNLCRCTGYRPIIDACKTF 160 (1330)
T ss_pred EEecCCcCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHcCCCC-CHHHHHHHhcCCcccCCCCHHHHHHHHHH
Confidence 99999998435689999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HhcccccccccCcccccCC-ccccCCCC--CCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCC-CCCCChh
Q 000657 179 AKTNDALYTNMSSMSLKEG-EFVCPSTG--KPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEK-ELIFPPE 254 (1370)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~-~~~c~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~ 254 (1370)
+.+.. |. .+++ ..||+.+. +.++|... + .....+++.+++.+|++. +++||++
T Consensus 161 ~~~~~--~~------~~~~~~~~c~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~~~~~~~~fp~~ 217 (1330)
T TIGR02969 161 CKTSG--CC------QSKENGVCCLDQGINGLPEFEEG----D-----------ETSPELFSEEEFLPLDPTQELIFPPE 217 (1330)
T ss_pred hhccC--Cc------hhccccCcccccccccccccccc----c-----------cccccccchhcccCCCccccccCChh
Confidence 86521 11 1111 12454110 00011000 0 000125666788889987 9999999
Q ss_pred hhcc-C--CCC-ccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeec
Q 000657 255 LLLR-K--SNP-LNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK 330 (1370)
Q Consensus 255 l~~~-~--~~~-~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~ 330 (1370)
|+.. + ..+ +.+.+ ++.+|++|+||+||+++|+++|++++|||||||+++++++...++.+|||++|+||+.|+.+
T Consensus 218 l~~~~~~~~~~~~~~~~-~~~~~~~P~tl~ea~~ll~~~~~a~lvAGGTdl~~~~k~~~~~~~~lIdi~~I~EL~~i~~~ 296 (1330)
T TIGR02969 218 LMRMAEKQPQRTRVFYS-ERMMWISPVTLKELLEAKFKYPQAPVVMGNTSVGPEVKFKGVFHPVIISPDRIEELSVVNHT 296 (1330)
T ss_pred HhhcccccccceeeecC-CCceEECCCCHHHHHHHHHhCCCCEEEecCcchHHHhhhccCCCCeEEECCCChhhhcEEEc
Confidence 8854 1 223 55554 55799999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEE
Q 000657 331 DDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFH 410 (1370)
Q Consensus 331 ~~~l~IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~ 410 (1370)
+++|+|||+|||++|+++|.+.+.+++....+.|+.|++++++|||+||||+||||||||||||+||++|+|+||||+|+
T Consensus 297 ~~~l~IGA~vT~~el~~~l~~~i~~~p~~~~~~~p~L~~a~~~ias~qIRN~gTlGGNi~~asP~sD~~p~LlAl~A~v~ 376 (1330)
T TIGR02969 297 GDGLTLGAGLSLAQVKDILADVVQKLPEETTQTYRALLKHLGTLAGSQIRNMASLGGHIISRHLDSDLNPLLAVGNCTLN 376 (1330)
T ss_pred CCEEEEeccccHHHHHHHHHHhhhcCchhhhHHHHHHHHHHHHhCChhhcccccchhhcccCCCchhHHHHHHHcCcEEE
Confidence 99999999999999999998888777766667899999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCeEEEehhHhh-cccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEe-cCCcceEE
Q 000657 411 IVDCKGNIRTTMAEEFF-LGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE-EKDEEWVV 488 (1370)
Q Consensus 411 i~s~~g~~R~vpl~dF~-~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~-~~~~~~~i 488 (1370)
|.+.+| +|+||++||| .+|++++|+|+|||++|+||.+..+.++++||+++|+++|||+||+||+++++ +++ +|
T Consensus 377 l~s~~g-~R~vpl~dff~~~~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~l~~~~~---~i 452 (1330)
T TIGR02969 377 LLSKEG-KRQIPLSEQFLSKCPDADLKPQEILVSVNIPYSRKWEFVSAFRQAQRQQNALAIVNSGMRVFFGEGDG---II 452 (1330)
T ss_pred EecCCc-eEEEehHHhhhcccccccCCCCceEEEEEecCCCCccceeEEEEcCCccccHHHhhheEEEEEEcCCC---EE
Confidence 999999 9999999988 68999999999999999999876667888999999999999999999999996 455 99
Q ss_pred EEEEEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccC
Q 000657 489 SDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEG 568 (1370)
Q Consensus 489 ~~~rIa~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~ 568 (1370)
+++||+||||+|+|+|++++|++|.||+|+++++++|.+++.+++.|+.+++|+|++||++|+.+||+|||+++..++..
T Consensus 453 ~~aria~Ggvap~p~ra~~~E~~L~Gk~~~~~~~~~A~~~l~~~~~p~~~d~r~sa~YRr~la~~ll~kf~~~~~~~~~~ 532 (1330)
T TIGR02969 453 RELSISYGGVGPTTICAKNSCQKLIGRPWNEEMLDTACRLILDEVSLAGSAPGGKVEFKRTLIISFLFKFYLEVSQILKR 532 (1330)
T ss_pred eEEEEEEEcCcCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999988888889999999999999999999999987742
Q ss_pred -CCCcccCCCcccccccccccCCCccccccccccC--CC--CccCCcccccCccccccceeeccccCCCCCCcEEEEEEe
Q 000657 569 -KNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITK--HG--TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVL 643 (1370)
Q Consensus 569 -~~~~~~~~~~~~~s~~~~~~r~~~~g~q~~~~~~--~~--~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vr 643 (1370)
.....+.+++.+.|+.+.++||+++|.|.|+... +. ++|||+++|+|++.||||+++|++|++.+|||||+++||
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGk~v~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vr 612 (1330)
T TIGR02969 533 MDPGHYPSLADKYESALEDLHSKHHWSTLKHQNVDSMQLPQDPIGHPIMHLSGVKHATGEAIYCDDMPAVDQELFLTFVT 612 (1330)
T ss_pred ccccccccCChhhccccccccCCCCccccceecccccccccCcCCCCCcChhhHhhccccccccCCCCCCCCCEEEEEEe
Confidence 1112234677888999999999999999998422 22 789999999999999999999999998448999999999
Q ss_pred cCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCCCCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeE
Q 000657 644 SRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVE 723 (1370)
Q Consensus 644 Sp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ 723 (1370)
||++||||++||+|+|++||||++|+|++|+|+.|.++ ++++|++++|||+|||||+|||+|+++|++|+++|+|+
T Consensus 613 Sp~ahArI~sID~s~A~~~pGV~~V~t~~Dvp~~~~~~----~~~~la~~~Vr~~Gqpva~VvAet~~~A~~Aa~~V~Ve 688 (1330)
T TIGR02969 613 SSRAHAKIVSIDLSEALSLPGVVDIITAEHLQDANTFG----TEKLLATDKVHCVGQLVCAVIADSEVQAKQAAKHVKIV 688 (1330)
T ss_pred cCCCceEEEeeeHHHHhcCCCeEEEEeHHHCCCCCCCC----CeeecCCCeEEEcCCeEEEEEECCHHHHHHHhcCCEEE
Confidence 99999999999999999999999999999998655443 78999999999999999999999999999999999999
Q ss_pred Eeec-CcCCCHHHHHhccCCCCCCccccccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEe
Q 000657 724 YEEL-PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMIS 802 (1370)
Q Consensus 724 ye~l-p~v~~~~~A~~~~a~~~~~~~~~~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~ 802 (1370)
||+| |+++|+++|+++++++. ....+.+||++++| ++|+++||++|++++|+|+||||++|+|+|+.++|+|+||+
T Consensus 689 Ye~l~~~v~d~~~Al~~~a~~~-~~~~~~~Gdv~~af--~~a~~vve~~y~~~~~~H~~mEp~~~~A~~~~~~g~l~V~~ 765 (1330)
T TIGR02969 689 YRDLEPLILTIEEAIQHKSFFE-PERKLEYGNVDEAF--KVVDQILEGEIHMGGQEHFYMETQSMLVVPKGEDQEMDVYV 765 (1330)
T ss_pred EecCCCCcCCHHHHhcCCCEec-ccccccCCchhhhh--ccCCEEEEEEEEECCEeecccCCCEEEEEEeCCCCeEEEEE
Confidence 9999 56799999999887554 33456899999999 99999999999999999999999999999974457899999
Q ss_pred CCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEE
Q 000657 803 STQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLG 882 (1370)
Q Consensus 803 stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~ 882 (1370)
|||+|+.+|..||++||||++||||+.+++|||||+|.+....+++.||++|+++||||||+|||+|+|+.+++||++.+
T Consensus 766 stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aA~aA~~~gRPVk~~~sR~e~~~~~~~R~~~~~ 845 (1330)
T TIGR02969 766 STQFPKYIQDIVAATLKLPVNKVMCHVRRVGGAFGGKVGKTSIMAAITAFAANKHGRAVRCTLERGEDMLITGGRHPYLG 845 (1330)
T ss_pred CCcCHHHHHHHHHHHhCCCHHHeEEEeCCcccCcccccccccHHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEE
Confidence 99999999999999999999999999999999999999854345689999999999999999999999999999999999
Q ss_pred EEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHH
Q 000657 883 KYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITE 962 (1370)
Q Consensus 883 ~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E 962 (1370)
+||+|+++||+|+|++++++.|+|+|.+.+..++.++..+..++|+|||++++++.|+||+||+|+|||||.+|++|++|
T Consensus 846 ~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~RG~G~~q~~fa~E 925 (1330)
T TIGR02969 846 KYKAGFMNDGRIVALDVEHYSNGGSSLDESLWVIEMGLLKMDNAYKFPNLRCRGWACRTNLPSNTAFRGFGFPQAGLITE 925 (1330)
T ss_pred EEEEEECCCCCEEEEEEEEEEecccccCcchHHHHHHHHhcCCCccCCcEEEEEEEEECCCCCCCccCCCchHHHHHHHH
Confidence 99999999999999999999999999988877778788889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHhcCCCCCccccCccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeee
Q 000657 963 NWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTK 1042 (1370)
Q Consensus 963 ~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~ 1042 (1370)
++||++|++|||||+|||++|++++|+.+++++.++++.+++||+++++.++|++|++.++.||+.++|++||+++++..
T Consensus 926 ~~mD~lA~~lg~DP~e~R~~N~~~~gd~~p~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGiG~a~~~ 1005 (1330)
T TIGR02969 926 ACITEVAAKCGLSPEKVRTINMYKEIDQTPYKQEINAKNLFQCWRECMAKSSYSERKVAVEKFNAENYWKKRGLAVIPLK 1005 (1330)
T ss_pred HHHHHHHHHHCcCHHHHHHHhCCCCcccCCCCcccCCCcHHHHHHHHHHhcCHHHHHHHHHHHhccCCCeEEEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998888778888889999999999999
Q ss_pred eccccccccCCceeEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhh
Q 000657 1043 FGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSD 1122 (1370)
Q Consensus 1043 ~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~ 1122 (1370)
|++++.....+++++.|+|+.||+|+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|+
T Consensus 1006 ~~~~~~~~~~~~~~a~v~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~gSr~t~ 1085 (1330)
T TIGR02969 1006 FPVGLGSVAMGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGTSTETVPNTNASGGSVVAD 1085 (1330)
T ss_pred eccccccCCCCCccEEEEEcCCceEEEEECCcCcCCChHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCCchHHHHH
Confidence 98877544456789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEe
Q 000657 1123 IYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEI 1202 (1370)
Q Consensus 1123 ~~g~Av~~Ac~~L~~rl~~~a~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeV 1202 (1370)
++|+||++||++|++||+++++.++..+|.+++..++..+++|.+.++|..+...+++....+.++.||+||+|++||||
T Consensus 1086 ~~G~Av~~A~~~l~~rl~~~aa~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVEV 1165 (1330)
T TIGR02969 1086 LNGLAVKDACQTLLKRLEPIISKNPQGTWKDWAQTAFDQSISLSAVGYFRGYESNINWEKGEGHPFEYFVYGAACSEVEI 1165 (1330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHhhccCCCceEEEEEecCCcccccccCcCCCCccccceeeEEEEEEE
Confidence 99999999999999999999988878899999876776678899999886655555565444456668999999999999
Q ss_pred eCCCCcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCC
Q 000657 1203 DTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPL 1282 (1370)
Q Consensus 1203 D~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~ 1282 (1370)
|++||+++|+|+++++|||++|||.+++||||||++|||||+|+|++.||+ +|+++|++|++|+||++.|||.
T Consensus 1166 D~~TG~v~vlr~~~v~D~G~~INP~~~~GQieGg~vqGiG~al~Ee~~yd~-------~G~~lt~~~~dY~iPt~~DiP~ 1238 (1330)
T TIGR02969 1166 DCLTGDHKNIRTDIVMDVGHSINPALDIGQVEGAFIQGMGLYTIEELSYSP-------QGILYSRGPNQYKIPAICDIPT 1238 (1330)
T ss_pred ecCCCCEEEEEEEEEEeCCcccCHHHHhHhHHHHHHHHHHHHHcceeEECC-------CCCCCCCCcccccCCchhhcCC
Confidence 999999999999999999999999999999999999999999999999998 8999999999999999999995
Q ss_pred eeEEEEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcccccccccC-
Q 000657 1283 KFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFIN- 1361 (1370)
Q Consensus 1283 ~~~v~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~~~~~~~~~- 1361 (1370)
+|+|.++++.+++.+|||+||+||+|+++++++++||+|||++|+++.|++++|++++|+|||+||++|.+++++.+.+
T Consensus 1239 ~~~v~~~~~~~~~~~p~GaKGvGE~~~~~a~~v~~AI~nAI~~A~g~~g~~~~~~~~~P~Tperv~~al~~~~~~~~~~~ 1318 (1330)
T TIGR02969 1239 ELHISFLPPSEHSNTLYSSKGLGESGVFLGCSVFFAIHDAVRAARQERGLSGPWKLTSPLTPEKIRMACEDKFTKMIPRD 1318 (1330)
T ss_pred CEEEEEEeCCCCCCCCCccccCcccccccCccHHHHHHHHHHHHHhhcCCCcCccCCCCCCHHHHHHHhhhhHHHhhhcc
Confidence 5999999754788999999999999999877899999999999998888877889999999999999999999887544
Q ss_pred -CCCCCCCCC
Q 000657 1362 -SEYRPKLSV 1370 (1370)
Q Consensus 1362 -~~~~~~~~~ 1370 (1370)
+.+...|++
T Consensus 1319 ~~~~~~~~~~ 1328 (1330)
T TIGR02969 1319 EPGSYVPWNV 1328 (1330)
T ss_pred CccCCcccee
Confidence 444445654
No 2
>PLN02906 xanthine dehydrogenase
Probab=100.00 E-value=2.8e-272 Score=2660.40 Aligned_cols=1304 Identities=80% Similarity=1.308 Sum_probs=1189.3
Q ss_pred CCcHHHHHhhCCCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEeccccCCCCCCCHHHH
Q 000657 38 HLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQE 117 (1370)
Q Consensus 38 ~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~~~~iq~ 117 (1370)
+++||+|||+.||||||.||++|+||||||+||++|+.+|+++|++|||||+|+++++|++|+|||||++..+.|||||+
T Consensus 1 ~~~ll~~LR~~~l~g~k~gC~~g~CGaCtv~~~~~~~~~~~~~~~~v~sC~~~~~~~~g~~i~Tvegl~~~~~~~~~vq~ 80 (1319)
T PLN02906 1 HQTLLEYLRDLGLTGTKLGCGEGGCGACTVMVSHYDRKTGKCVHYAVNACLAPLYSVEGMHVITVEGIGNRRDGLHPVQE 80 (1319)
T ss_pred CCcHHHHHHhCCCCCCCCCcCCCCCCCeEEEECCccccCCccCCeEehhhHHHHHHhCCCEEEecCCCCCCCCCCCHHHH
Confidence 47999999988999999999999999999999999988899999999999999999999999999999854578999999
Q ss_pred HHHHcCCCCCCCCChHHHHHHHHHHHcCC-CCCCHHHHHHHhcCcccccCCChhHHHHHHHHHhcccc----cccccCcc
Q 000657 118 SLVRSHGSQCGFCTPGFIMSMYSLLRSSQ-TPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDA----LYTNMSSM 192 (1370)
Q Consensus 118 a~~~~~~~qCG~CtpG~v~~~~~ll~~~~-~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~~~~----~~~~~~~~ 192 (1370)
||+++|++|||||||||||++++||++++ .| +++||+++|+|||||||||++|++|+++++.+.+. .|. .
T Consensus 81 a~~~~~~~QCG~CtpG~vm~~~~ll~~~~~~~-~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~~~~~~~~~~~----~ 155 (1319)
T PLN02906 81 ALASMHGSQCGFCTPGFIMSMYALLRSSKTPP-TEEQIEECLAGNLCRCTGYRPILDAFRVFAKTDDALYTGVSS----L 155 (1319)
T ss_pred HHHHcCCCcCCCCchHHHHHHHHHHHhCCCCC-CHHHHHHHhcCCcccCCCCHHHHHHHHHHHhcccccCCcccc----h
Confidence 99999999999999999999999999984 67 99999999999999999999999999999976321 111 0
Q ss_pred cccCCccccCCCCCCCCCCCCCCCCCcccccccccCCccccccccc----CCCCCCCCC-CCCCChhhhccCCCCccccC
Q 000657 193 SLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSE----IDGSTYTEK-ELIFPPELLLRKSNPLNLSG 267 (1370)
Q Consensus 193 ~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~p~~l~~~~~~~~~~~~ 267 (1370)
+++++..||++++..+.|....++. .+.+. ..+|++ ++|.+|+|. |++||++|+.....++.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~ 225 (1319)
T PLN02906 156 SLQDGEPICPSTGKPCSCGSKTTSA---------AGTCK-SDRFQPISYSEIDGSWYTEKELIFPPELLLRKLTPLKLLG 225 (1319)
T ss_pred hhhhccccccccCcccccccccccc---------ccccc-ccccccccccccccccCccccccCCHHHhhCCCcceeecC
Confidence 2233334564332111121000000 00000 013333 678899998 99999999755455566643
Q ss_pred CCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHH
Q 000657 268 FGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLK 347 (1370)
Q Consensus 268 ~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~ 347 (1370)
.++++||+|+||+||+++|+++|++++|||||||+++++++...|+++|||++|+||+.|+.++++|+|||+|||++|++
T Consensus 226 ~~~~~~~~P~tl~ea~~ll~~~~~a~ivAGGTdl~~~~~~~~~~~~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~el~~ 305 (1319)
T PLN02906 226 NGGLTWYRPTSLQHLLELKAEYPDAKLVVGNTEVGIEMRFKNAQYPVLISPTHVPELNAIKVKDDGLEIGAAVRLSELQN 305 (1319)
T ss_pred CCCceEECcCCHHHHHHHHHhCCCCEEEEcCchhHHHhhhccCCCCeEEECCCChhhhcEEecCCEEEEecCCcHHHHHH
Confidence 24789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhh
Q 000657 348 MFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFF 427 (1370)
Q Consensus 348 ~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~ 427 (1370)
+|.+.+.+.+..+...++.|++++++|||+||||+|||||||++++|+||++|+|+||||+|+|.+.+|++|+||++|||
T Consensus 306 ~l~~~i~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asP~sD~~p~LlAl~A~v~l~s~~g~~R~vpl~dFf 385 (1319)
T PLN02906 306 LFRKVVKERPAHETSACKAFIEQLKWFAGTQIRNVASIGGNICTASPISDLNPLWMAAGATFVIISCDGDIRSVPASDFF 385 (1319)
T ss_pred HHHHHhhhcchhhhHHHHHHHHHHHHhCCHhhcCceechhhhccCCCchhHHHHHHHcCcEEEEEcCCCCeEEEEHHHhc
Confidence 99888876665667789999999999999999999999999999999999999999999999999998658999999999
Q ss_pred cccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHH
Q 000657 428 LGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKK 507 (1370)
Q Consensus 428 ~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~ 507 (1370)
+||+++.|+|+|||++|+||.+.++.++++||+++|+++|||+||+||+++++++++.++|+++||+||||+|+|+|+++
T Consensus 386 ~g~~kt~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~l~~~~~~~~i~~aria~Ggva~~p~ra~~ 465 (1319)
T PLN02906 386 LGYRKVDLKPDEILLSVFLPWTRPFEYVKEFKQAHRRDDDIAIVNAGMRVKLEEKDGEWIVSDASIAYGGVAPLSVSARK 465 (1319)
T ss_pred CccccccCCCCceEEEEEccCCCCCccEEEEEEcCccccchhheeeEEEEEEecCCCCceEeEEEEEEeccCCceecHHH
Confidence 99999999999999999999877778899999999999999999999999997411112799999999999999999999
Q ss_pred HHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccCCCCcccCCCcccccccccc
Q 000657 508 TKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSF 587 (1370)
Q Consensus 508 ~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 587 (1370)
+|++|.||+|+++++++|.+++.+++.+.++.+++|++||++|+.+||+|||+++.+++....+..+.+++.+.|+.+.+
T Consensus 466 ~E~~L~G~~~~~~~i~~A~~~l~~~~~p~~d~~~~sa~YR~~la~~ll~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (1319)
T PLN02906 466 TEEFLIGKPWNKETLQDALKVLQKDILIKEDAPGGMVEFRKSLALSFFFKFFLWVSHQLEADGSTIETFPESHLSAAQPF 545 (1319)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHhccCCCcCCCCCCHHHHHHHHHHHHHHHHHHHhhhccccccccccCChhhccccccc
Confidence 99999999999999999999999999988887789999999999999999999999887421112335788999999999
Q ss_pred cCCCccccccccccCCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEE
Q 000657 588 HRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVG 667 (1370)
Q Consensus 588 ~r~~~~g~q~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~ 667 (1370)
+||+|+|.|.|+.++++++|||+++|+|+..||||+++|++|++++|||||+++||||++||+|++||+|+|++||||++
T Consensus 546 ~~~~~~~~q~~~~~~~~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~g~L~a~~vrSp~aharI~sID~s~A~~~pGV~~ 625 (1319)
T PLN02906 546 PRPSSVGMQDYETVKQGTAVGQPEVHLSAELQVTGEAEYADDIPMPPNTLHAALVLSTKPHARILSIDDSEAKSSPGFAG 625 (1319)
T ss_pred cCCCCccceecccccccccCCCCccCcchhhhcceeEEeccCCcCCCCCEEEEEEecCcCceEEeecchHHHhCCCCeEE
Confidence 99999999999977889999999999999999999999999999767999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCCCCCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccCCCCCCc
Q 000657 668 IFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTE 747 (1370)
Q Consensus 668 Vvt~~Dipg~n~~g~~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~~~~~~ 747 (1370)
|+|++|+|+.|.+|....|+|+|++++|+|+|||||+|||+|+++|++|+++|+|+||+||+++|+++|++++++|+...
T Consensus 626 v~t~~Dip~~~~~g~~~~~~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~~V~Veye~lp~v~~~~~Al~~~a~~~~~~ 705 (1319)
T PLN02906 626 IFLAKDVPGDNMIGPVVHDEELFATDVVTCVGQVIGVVVADTQENAKAAARKVKVEYEELPAILSIEEAIEAGSFHPNTE 705 (1319)
T ss_pred EEchhhCCCCCCCCCCCCCeeEecCcEEEEcCCeEEEEEECCHHHHHHHhCCCEEEEecCCccCCHHHHhcCCCcccCCC
Confidence 99999999777777777899999999999999999999999999999999999999999999999999999988775333
Q ss_pred cccccCCcccccccCC--CccEEEEEEEECcccccCCCCCeEEEEEecCC-CeEEEEeCCCChHHHHHHHHHHhCCCCCc
Q 000657 748 RCFRKGDVDICFQSGQ--CDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHG-NEVHMISSTQAPQKHQKYVSHVLGLPMSK 824 (1370)
Q Consensus 748 ~~~~~Gdv~~af~~~~--a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~-g~l~V~~stQ~p~~~r~~vA~~Lglp~~k 824 (1370)
..+.+||++++| ++ |++|||++|++++|+|+||||++|+|+|+ ++ |+|+||+|||+|+.+|..||++||||++|
T Consensus 706 ~~~~~Gdv~~af--~~a~a~~vve~~~~~~~~~H~~mEp~~~~A~~~-~~~g~l~v~~sTQ~p~~~r~~vA~~Lgip~~k 782 (1319)
T PLN02906 706 RRLEKGDVELCF--ASGQCDRIIEGEVQMGGQEHFYLEPNSSLVWTS-DSGNEVHMISSTQAPQKHQKYVAHVLGLPMSK 782 (1319)
T ss_pred ceeecCCHHHHh--hccCCceEEEEEEEECCccccccCCCeEEEEEe-CCCCEEEEEECCcCHHHHHHHHHHHhCCChHH
Confidence 456899999999 87 79999999999999999999999999998 45 68999999999999999999999999999
Q ss_pred EEEEecccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEec
Q 000657 825 VVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNN 904 (1370)
Q Consensus 825 VrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d 904 (1370)
|||+.+++|||||+|.+....++++||++|+++||||||+|||+|+|+.+++||++.++||+|+++||+|+|++++++.|
T Consensus 783 VrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sReE~~~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d 862 (1319)
T PLN02906 783 VVCKTKRIGGGFGGKETRSAFIAAAAAVPAYLLNRPVKLTLDRDVDMMITGQRHAFLGKYKVGFTNEGKILALDLEIYNN 862 (1319)
T ss_pred eEEEeCCcccCccccccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCccceEEEEEEEECCCCCEEEEEEEEEec
Confidence 99999999999999998655567889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhc
Q 000657 905 AGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINF 984 (1370)
Q Consensus 905 ~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl 984 (1370)
+|+|.+++..++.+++.++.++|+|||++++++.|+||+||+|+|||||.+|++|++|++||++|++|||||+|||++|+
T Consensus 863 ~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl 942 (1319)
T PLN02906 863 GGNSLDLSGAVLERAMFHSDNVYEIPNVRIVGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAVELNKSPEEIREMNF 942 (1319)
T ss_pred CcccCCcchHHHHHHHHhcCCCccCcceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhC
Confidence 99999888888888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecC
Q 000657 985 QGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTD 1064 (1370)
Q Consensus 985 ~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~D 1064 (1370)
+++|+.+++|+.++++.+++||+++++.++|++|++.+++||+.|+|+|||+++++.+||.++...+.+++.+.|+|++|
T Consensus 943 ~~~g~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~krGiG~a~~~~g~~~~~~~~~~~~a~V~i~~D 1022 (1319)
T PLN02906 943 QGEGSVTHYGQVLQHCTLPQLWDELKVSCDFLKRREEVDEFNAKNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTD 1022 (1319)
T ss_pred CCCCCCCcCCccccCCCHHHHHHHHHHhCCHHHHHHHHHHHhhcCCCceEEEEEEecccccccccccCCccceEEEEcCC
Confidence 99999999999999999999999999999999988888889988999999999999999887754445678899999999
Q ss_pred CcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhh
Q 000657 1065 GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIAS 1144 (1370)
Q Consensus 1065 GsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~ 1144 (1370)
|+|+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+++++
T Consensus 1023 GsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~d~V~v~~~DT~~~p~~~gT~aSr~t~~~G~Av~~Aa~~l~~rl~~~a~ 1102 (1319)
T PLN02906 1023 GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEQIKARMEPVAS 1102 (1319)
T ss_pred ceEEEEECCccCCCChHHHHHHHHHHHHCCCHHHEEEEccCCCCCCCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hCCCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEEEecCccc
Q 000657 1145 KHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSL 1224 (1370)
Q Consensus 1145 ~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~i 1224 (1370)
+++..+|++++..+|..+.+|.++++|..|...++|.++.+.++.||+||+|++|||||++||+++|+|+++++|||++|
T Consensus 1103 ~~~~~~~~~l~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~vlr~~~v~D~G~~i 1182 (1319)
T PLN02906 1103 KLNFSSFAELVTACYFQRIDLSAHGFYITPDIGFDWKTGKGNPFNYFTYGAAFAEVEIDTLTGDFHTRRVDIVMDLGYSI 1182 (1319)
T ss_pred HcCCCCHHHHHHHhhccCCCeEEEEEecCCCcccccccccCCCccceeeeEEEEEEEEecCCCcEEEEEEEEEEecCccC
Confidence 88889999999988876778999999987755566766667777789999999999999999999999999999999999
Q ss_pred CcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCCCCCCCCCCCcC
Q 000657 1225 NPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAV 1304 (1370)
Q Consensus 1225 NP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~~~~~p~gaKGv 1304 (1370)
||.+++|||||||+||||++|+|++.||++.|+|..+|+++|++|++|+||++.|||.+|+|.+++..++|.+|||+||+
T Consensus 1183 NP~~~~GQieGg~vqGiG~aL~Ee~~~d~~~~~~~~~G~llt~~~~~Y~iPt~~DiP~~~~v~~~~~~~~~~~p~gaKGv 1262 (1319)
T PLN02906 1183 NPAIDIGQIEGAFVQGLGWVALEELKWGDAAHKWIRPGSLFTCGPGTYKIPSVNDIPFKFNVSLLKGAPNPKAIHSSKAV 1262 (1319)
T ss_pred CHHHHhHhhHHHHHHHHHHHhcCceEEcccccccCCCCccccCCCcccCCCCccccCCceEEEEEeCCCCCCCCCcCccC
Confidence 99999999999999999999999999997546788889999999999999999999955999999633899999999999
Q ss_pred CCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcccccccc
Q 000657 1305 GEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPF 1359 (1370)
Q Consensus 1305 GE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~~~~~~~ 1359 (1370)
||+|++++++|++||+|||++||++.|+..+|++++|+|||+|+++|.+++++.+
T Consensus 1263 GE~~~~~~aav~~AI~~Ai~~A~~~~g~~~~~~~~~P~Tperi~~a~~~~~~~~~ 1317 (1319)
T PLN02906 1263 GEPPFFLAASVFFAIKDAIKAARAEVGLHGWFPLDTPATPERIRMACGDEITAPF 1317 (1319)
T ss_pred CccccccchHHHHHHHHHHHHHHhhcCCCCcccCCCCCCHHHHHHHccchhhhhh
Confidence 9999999889999999999999988888777899999999999999999987764
No 3
>KOG0430 consensus Xanthine dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=6.5e-266 Score=2387.23 Aligned_cols=1242 Identities=56% Similarity=0.908 Sum_probs=1155.4
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1370)
|.+.|.|||++++++++||++||++|||+. +|||||.||+||+||||||+|.+||+.+ ++++.+|||||+|+++++|+
T Consensus 1 ~~l~F~VNG~~~~~~~vdP~~TL~~fLR~k~~ltgtKlgC~EGGCGaCtv~ls~~dp~~-~~~~~avNsCLt~l~s~~g~ 79 (1257)
T KOG0430|consen 1 MELVFAINGKRVEVELLPPDLTLNTFLREKLGLTGTKLGCGEGGCGACTVVLSKYDPEL-KVRHWAVNSCLTLLNSVHGL 79 (1257)
T ss_pred CceEEEECCEEeeEecCCcchhHHHHHHHhcCCcceeeccCCCCccceEEEEeccCCCc-eeEEeehhhhhhhcccccce
Confidence 468899999999999999999999999996 9999999999999999999999999999 99999999999999999999
Q ss_pred EEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCC-CCCCHHHHHHHhcCcccccCCChhHHHHHH
Q 000657 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQ-TPPTEEQIEESLAGNLCRCTGYRPIVDAFR 176 (1370)
Q Consensus 98 ~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~-~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~ 176 (1370)
+|||+||||+++.++||||++|+..||+|||||||||||+||+||++.+ .| |.+||+++|+||||||||||||+||++
T Consensus 80 ~VtT~EGlGn~~~g~HPiq~RlA~~hgsQCGFCtPG~vmsmYalL~n~~~~~-T~~eie~a~~GNLCRCTGYRPIldA~k 158 (1257)
T KOG0430|consen 80 EVTTSEGLGNRRDGYHPIQERLAKMHGSQCGFCTPGFVMSMYALLRNSKNSP-TMEEIENAFGGNLCRCTGYRPILDAMK 158 (1257)
T ss_pred EEEeeecccccccCcCcHHHHHhhccCCcccCCCccHHHHHHHHHHhCCCCC-CHHHHHHhhccceeeecCCchHHHHHh
Confidence 9999999998889999999999999999999999999999999999988 67 999999999999999999999999999
Q ss_pred HHHhcccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCC-CCCCChhh
Q 000657 177 VFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEK-ELIFPPEL 255 (1370)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~l 255 (1370)
+||.+.+ ||... ....|.+ + ...++..+ ++|||+ +++|||+|
T Consensus 159 SFa~d~~----------------~~~~g-~~~~~~~-----~--------------~~~~~~~~-~~~dp~~~~i~~pe~ 201 (1257)
T KOG0430|consen 159 SFAVDSD----------------ICGPG-CDGFSIA-----E--------------EKDIEDLS-PPYDPKKELIFPPEL 201 (1257)
T ss_pred hhccCCC----------------ccccC-ccccccc-----c--------------cccccccc-CCCCCccCcccChHH
Confidence 9996542 33211 0011210 0 11556667 899998 99999999
Q ss_pred hccCCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEE
Q 000657 256 LLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLE 335 (1370)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~ 335 (1370)
+..... ..+++ ++.+|+.|.||+|++++++++|+++||+|||..+++++.+. ++.+||+++||||+.++.++++|+
T Consensus 202 ~~~~~~-~~~~~-~~~~W~~P~sl~eL~~~~~~~~~~~Lv~GNT~~gv~~r~~~--~~~~Id~~~v~el~~~~~~~~gi~ 277 (1257)
T KOG0430|consen 202 LKRKKT-TLLGN-DGIRWYWPVSLEELFELKANKPDAKLVAGNTAHGVYRRSPD--YQKFIDVSGVPELKALNVDDNGLE 277 (1257)
T ss_pred hccccc-cccCC-CCcEEeCcccHHHHHHHHhcCcceEEEeccccceEEeccCC--CcceechhcCchhhhcccCCCceE
Confidence 876333 44444 78999999999999999999999999999999999999988 899999999999998888999999
Q ss_pred EcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC----CCChhHHHHhcCCEEEE
Q 000657 336 IGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP----ISDLNPLWMASGAKFHI 411 (1370)
Q Consensus 336 IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp----~sD~~p~L~al~A~v~i 411 (1370)
|||++||+++++.|++.+. .+. +.+|+.+++|+++||++||||.|||||||+.++| +||++|+|+|+||+|++
T Consensus 278 lGa~~sls~~~~~l~~~~~-~~~--~~~~~~~~~hl~~~A~~~IRN~atigGnI~~~~~~~~f~SDl~~~l~a~~a~v~~ 354 (1257)
T KOG0430|consen 278 LGAALSLSETMELLRKLVK-RPG--FEYFKALWEHLKWFANVQIRNVGTIGGNICTKAQSPEFPSDLFILLEALDAKVTI 354 (1257)
T ss_pred EcccccHHHHHHHHHHHHh-CcH--HHHHHHHHHHHHHhcccceeccccccceeEeccCCCCCchhHHHHHHhhccEEEE
Confidence 9999999999999988877 432 2799999999999999999999999999999988 89999999999999999
Q ss_pred EeCCCCeEEEehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEE
Q 000657 412 VDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDA 491 (1370)
Q Consensus 412 ~s~~g~~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~ 491 (1370)
.+..+...++ ||.+|+++.|.+.|||.+|+||...+ +|.+||+++|+++|||+||++|+..++ +|+++
T Consensus 355 ~~~~~~~~~~----~l~~y~~~~l~~~~illsv~ip~~~~--~f~~~k~a~R~e~a~a~vNa~fl~e~~------~V~~~ 422 (1257)
T KOG0430|consen 355 LNNSGDLEKV----FLEEYLGSSLGAKEILLSVVLPASRK--YFESYKQAPRRENAIAYVNAAFLAEVG------KVSSA 422 (1257)
T ss_pred eecCCcccee----eHhhhhccccCcceEEEEEEccCcHH--HHHHHHhcccccchhhhhhHHhhhccc------eeeee
Confidence 9987754444 55555577899999999999999866 999999999999999999998888765 79999
Q ss_pred EEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccCCCC
Q 000657 492 LLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNS 571 (1370)
Q Consensus 492 rIa~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~ 571 (1370)
||+|||++|..+++.++|+.|.||.|+++.+++|+..|..++.|+. |+++++||+.||.+||||||+.+.+..+.
T Consensus 423 ~i~fGg~~p~~i~a~~~~~~~~gk~~~~~ll~~a~~lL~~~l~~~~--p~~~~~yR~~La~sfffKF~l~~~~~~~~--- 497 (1257)
T KOG0430|consen 423 RICFGGIAPDFIHAKKTEELLLGKPWEEELLEDAFGLLQSDLVPDE--PGGMPEYRKKLALGFFFKFLLKVAHKVKN--- 497 (1257)
T ss_pred eEeecCcCcchhhhhhHHHHhhcccccHHHHHHHHHhhhhhccCCC--CCCcHHHHHHHHHHHHHHHHHHHhhhccc---
Confidence 9999999999999999999999999999999999999999998776 88999999999999999999999988741
Q ss_pred cccCCCcccccccccccCCCccccccccccCCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceE
Q 000657 572 IKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARI 651 (1370)
Q Consensus 572 ~~~~~~~~~~s~~~~~~r~~~~g~q~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I 651 (1370)
-....++.....+|++++.|.|.+..+..+||+|+.++.+..|+||||.|+|||+.+++.||++||.|+++||+|
T Consensus 498 -----~~~~~~g~~~~~~~~ls~~Q~~~~~q~~~pVG~pi~~~~a~~qaSGEAvY~dDip~~~n~lh~aFV~St~p~A~I 572 (1257)
T KOG0430|consen 498 -----GNKFITGGSLLARPLLSGGQQFETTQEHYPVGRPVEKLEALIQASGEATYVDDIPTPPNTLHAAFVLSTKPHAKI 572 (1257)
T ss_pred -----cCCccCCCccccccccccceeecCCCCCCcCcchhhhhhhhhhcccceEEecCCCCCCCeeEEEEEEcccCCcEE
Confidence 122334455667899999999988877999999999999999999999999999999999999999999999999
Q ss_pred eeecchhccCCCCEEEEEecCCCCCCCC--CCC--CCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeec
Q 000657 652 LSIDDSGARSSPGFVGIFFAEDVQGDNR--IGP--VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEEL 727 (1370)
Q Consensus 652 ~sID~s~A~~~pGVv~Vvt~~Dipg~n~--~g~--~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~l 727 (1370)
+|||+|+|+++|||+++++++|+|+.|. .+. ...|+++||+++|+++||+||+|||+|.++|++||++|+|+|++|
T Consensus 573 ~sID~seAl~~~GVv~~~~akDiPg~n~~~i~~~~~~~de~lFA~~~v~~~GQ~ig~ivAdt~~~A~rAA~lVkv~Y~~l 652 (1257)
T KOG0430|consen 573 LSIDASEALKLPGVVAFFSAKDIPGNNMKNIGNMFFPEDEELFATDVVTCVGQPIGVIVADTHELAKRAAKLVKVEYEEL 652 (1257)
T ss_pred eeecchhhcCCCceEEEEecccCCCCCccccccccCCCccceeecceeEEcCcEEEEEEeCCHHHHHHhhhceEEEeccC
Confidence 9999999999999999999999999883 322 257899999999999999999999999999999999999999999
Q ss_pred -CcCCCHHHHHhccCCCCCCccccccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCC
Q 000657 728 -PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQA 806 (1370)
Q Consensus 728 -p~v~~~~~A~~~~a~~~~~~~~~~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~ 806 (1370)
|++++++||++..++++ ....+..+++.+.|...++|.++|++++.+.|+|||||||+++|+|+ ++ .|.||+||||
T Consensus 653 ~p~I~t~e~Ai~~~s~~~-~~~~~~~~~~~~~~~~~~~d~i~~Ge~~mG~QeHFYmEtQttl~vP~-e~-el~v~~STQ~ 729 (1257)
T KOG0430|consen 653 PPPILPSEDAVKDKSLSE-TEPRLRKGDVGKSFQLEECDKILEGELDMGGQEHFYMEPQTTLVVPF-EG-ELQVYSSTQW 729 (1257)
T ss_pred CCceecHHHHHhhhcccC-CCccccccCccccccccccceeEEEEEEecceeEEEeccceeEEeec-CC-eEEEEEcCcC
Confidence 67999999999988766 56667778776666325679999999999999999999999999998 34 8999999999
Q ss_pred hHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEE
Q 000657 807 PQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKV 886 (1370)
Q Consensus 807 p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~ 886 (1370)
|..+|..||++||||.+||+|+++|+|||||||.+++.+++++|||+|+|++||||++++|++||..+|+|||+..+||+
T Consensus 730 ~~~tQ~~VA~~Lgipa~~V~v~trRvGGGFGGK~trs~~VA~a~ALaA~Kl~RPvr~~l~r~~dM~itG~Rhp~~~~Ykv 809 (1257)
T KOG0430|consen 730 PDFTQSVVAHVLGLPANKVQVKTRRLGGGFGGKETRSNPVAAAAALAAYKLNRPVRFVLSRESDMIITGKRHPFHGKYKV 809 (1257)
T ss_pred cHHHHHHHHHHhCCCccceEEEEEeeccccccccccccHHHHHHHHHHHHhCCCEEEEecchhhhhhcCCccceEEeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHH
Q 000657 887 GFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQ 966 (1370)
Q Consensus 887 g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mD 966 (1370)
|+++||||+|++.++|.|+|+..|+++.++ +++.+.+++|++||+|+++++|+||.|+++||||||.||++++.|++|.
T Consensus 810 gf~~~GkI~aL~~~~~~naG~s~d~S~~~~-~~~~~~~n~Y~~~~~r~~G~~ckTN~pSnTa~Rg~G~pQG~~i~E~iie 888 (1257)
T KOG0430|consen 810 GFKSDGKILALDLEFYENAGWSKDESPSVL-RAMFHSDNVYEIGDVRFDGYVCKTNLPSNTAFRGPGSPQGILITENIIE 888 (1257)
T ss_pred EEccCCeEEEEehhhhhccCCCcCcchHHH-hhhhhhhheecccceeeeeeEEecCCCCcchhcCCCChhhHHHHHHHHH
Confidence 999999999999999999999999999888 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHhcCCCCCccccCccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccc
Q 000657 967 RVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGIS 1046 (1370)
Q Consensus 967 elA~~lg~DP~e~Rl~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~ 1046 (1370)
++|.++|+||.|+|++|+++.|+.+++++.++.+.+.+||+++.+.++|++|+.++++||+.|+||||||++.|++||++
T Consensus 889 ~VA~~~g~d~eeVR~~N~y~eg~~~~~~~~~~~~~l~~~w~~~~~sS~y~~Rk~ev~~FN~~N~WrKRGi~~vp~~f~i~ 968 (1257)
T KOG0430|consen 889 RIAFELGKDPEEVRKINFYVEGSLTYYHGELQHCTLPQLWPECLVSSKFEKRKSEIEEFNKENRWKKRGLAMVPMKFGIS 968 (1257)
T ss_pred HHHHHhCCCHHHHhhhhhhhcccccccCCCcccCcHHHHHHHHHHhchHHHHHHHHHHhhhcChhhhcCceEeeeeccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceeEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHH
Q 000657 1047 FTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGA 1126 (1370)
Q Consensus 1047 ~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~ 1126 (1370)
+.. ++.|.|.||.||||.|.||++|||||++|+++|+||+.||||++.|++.++||+.+||+++|+||.++++.|.
T Consensus 969 ~~~----~~~a~V~Iy~DGSV~v~hgGiEmGQGL~TK~~Qvaa~~l~ip~~~v~v~~tsT~~v~na~~Ta~S~~Sd~~g~ 1044 (1257)
T KOG0430|consen 969 FTG----QAPALVHIYTDGTVVVTHGGIEMGQGLNTKVAQVAAYALGIPLSSVFVSETSTDKVPNASPTAASVSSDMYGA 1044 (1257)
T ss_pred ccC----CCceEEEEEcCCeEEEEECcEEcccchhHHHHHHHHHHhCCcccceEEeecccccccCCCccccccccccccH
Confidence 854 3789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCC
Q 000657 1127 AVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLT 1206 (1370)
Q Consensus 1127 Av~~Ac~~L~~rl~~~a~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~T 1206 (1370)
||++||++|.+||+++..+++..+|++++.+||.+.++|+++.+|+ +.|++|.|++||++++|||||++|
T Consensus 1045 AV~~~C~~l~~RL~Pv~~k~~~~tw~~~i~~AY~q~V~LsAs~~~~----------~~g~~~~Y~~yG~a~sEVEID~LT 1114 (1257)
T KOG0430|consen 1045 AVLDACETINARLEPVKSKHNFNTWEELIQAAYGQSINLSASDWYK----------PEGDMFPYLTYGAAASEVEIDTLT 1114 (1257)
T ss_pred HHHHHHHHHHHhhhhhhhhcCCccHHHHHHHHhhCccceeeecccc----------CCCCcccceeccceeEEEEEEEec
Confidence 9999999999999999999998999999999999999999986554 357789999999999999999999
Q ss_pred CcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEE
Q 000657 1207 GDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNV 1286 (1370)
Q Consensus 1207 G~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v 1286 (1370)
|+++|+|+++++|||.+|||.++.|||||+|+||+|++++||+.||+ +|.++|+++|+||||++.|||.+|+|
T Consensus 1115 G~~~ilRtDIv~D~G~SLNPaIDIGQIEGAFvQGlG~~t~Eel~~~~-------~G~l~t~gt~~YKiP~~~dIP~~FrV 1187 (1257)
T KOG0430|consen 1115 GDTEVLRVDILYDCGESLNPAIDIGQIEGAFVQGLGLVTLEELIYDP-------EGSLLTNGTWTYKIPGAKDIPKDFRV 1187 (1257)
T ss_pred CcceEEEEEEeeecccccCcccccchhhhHHHhchhhhhhhhheeCC-------CceEeecCCCcccCCCcccCchheEe
Confidence 99999999999999999999999999999999999999999999998 79999999999999999999999999
Q ss_pred EEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhccccccc
Q 000657 1287 SLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAP 1358 (1370)
Q Consensus 1287 ~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~~~~~~ 1358 (1370)
.++...|++.+.|+||++||||+++++++++||++||..||+ .||....|+|||+|+++|.+++++.
T Consensus 1188 ~LL~~~pn~~~v~sSKA~GEPPl~La~sv~fAi~~Ai~aAR~-----~~f~L~~PaTpe~i~~~c~~~~~~~ 1254 (1257)
T KOG0430|consen 1188 ELLNKNPNKAGVMSSKATGEPPLFLAASVFFAIRQAIKSARK-----DWFRLEAPATPERIRLACGDEFSEF 1254 (1257)
T ss_pred eeccCCCCccceeeccccCCChHHHHHHHHHHHHHHHHHHhh-----ccccCCCCCCHHHHHHhhcchhhhh
Confidence 999546999999999999999999999999999999999986 2889999999999999999998765
No 4
>PLN00192 aldehyde oxidase
Probab=100.00 E-value=9e-262 Score=2558.40 Aligned_cols=1260 Identities=34% Similarity=0.557 Sum_probs=1127.1
Q ss_pred ceEEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCC
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEG 96 (1370)
Q Consensus 18 ~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 96 (1370)
++.|+|+|||+++++++++|++|||+|||++ ||||||.||++|+||||||+|+++|+.+|++.+++|||||+|+++++|
T Consensus 3 ~~~i~~~vNg~~~~~~~~~p~~~Ll~~LR~~~~ltgtK~gC~~G~CGaCtV~v~~~~~~~~~~~~~~v~sCl~~~~~~~g 82 (1344)
T PLN00192 3 NMSLVFAVNGERFELSSVDPSTTLLEFLRTQTPFKSVKLGCGEGGCGACVVLLSKYDPVLDQVEDFTVSSCLTLLCSVNG 82 (1344)
T ss_pred cceEEEEECCEEEEeccCCCCCcHHHHHHHhhCCCCcCCCCCCCcCCCcEEEEeeccccccCcCCcEEehHHHHHHHhCC
Confidence 4579999999999996799999999999996 999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcC-----CCC------CCHHHHHHHhcCccccc
Q 000657 97 MHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSS-----QTP------PTEEQIEESLAGNLCRC 165 (1370)
Q Consensus 97 ~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~-----~~~------~~~~~i~~~l~gnlCRC 165 (1370)
++|+|||||++..+.|||||+||+++|++|||||||||||++|+||+++ |+| ++++||+++|+||||||
T Consensus 83 ~~i~TvEgl~~~~~~lhpvq~a~~~~~~~QCGfCtpG~vms~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCRC 162 (1344)
T PLN00192 83 CSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMCISLFSALVNADKTDRPEPPSGFSKLTVVEAEKAVSGNLCRC 162 (1344)
T ss_pred CEEEeecCcCCCCCCCCHHHHHHHHcCCCccCCCChHHHHHHHHHHHhcccccCCCcccccCCCCHHHHHHHhcCCceeC
Confidence 9999999998546789999999999999999999999999999999662 232 38999999999999999
Q ss_pred CCChhHHHHHHHHHhcccccccccCcccccCCc-cccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCC
Q 000657 166 TGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGE-FVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTY 244 (1370)
Q Consensus 166 tgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (1370)
|||++|++|+++++.+.+ ++++. .||++++ .| + . ....+|++|
T Consensus 163 tgY~~i~~a~~~~~~~~~----------~~~~~~~~~~~~~---~~-------~-~---------------~~~~~~~~~ 206 (1344)
T PLN00192 163 TGYRPIVDACKSFAADVD----------IEDLGLNSFWKKG---ES-------E-E---------------AKLSKLPPY 206 (1344)
T ss_pred CCCHHHHHHHHHHHhhcc----------chhcccccccccC---Cc-------c-h---------------hhhhhcccC
Confidence 999999999999986531 22221 2555422 01 0 0 011468889
Q ss_pred CCC-CC-CCChhhhcc--CCCCccccCCCCceEEecCCHHHHHHHHhhCC----CcEEEeccCcceeeeeecccccceEE
Q 000657 245 TEK-EL-IFPPELLLR--KSNPLNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLI 316 (1370)
Q Consensus 245 ~~~-~~-~~p~~l~~~--~~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~----~a~lvaGgTdl~v~~k~~~~~~~~lI 316 (1370)
+++ ++ +| |+|+.. ....+.+. ++++||+|+||+||+++|+++| ++++||||||++++ +. ...|+++|
T Consensus 207 ~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~P~sl~ea~~ll~~~~~~~~~a~lvAGgTdl~~~-k~-~~~p~~lI 281 (1344)
T PLN00192 207 NHSDHICTF-PEFLKKEIKSSLLLDS--SRYRWYTPVSVEELQSLLESNNFDGVSVKLVVGNTGTGYY-KD-EELYDKYI 281 (1344)
T ss_pred CCccccccC-hhhhhcccCccceecC--CCceEECcCCHHHHHHHHHhCCCCCCCeEEEEeCCcceee-ec-cCCCCeEE
Confidence 987 77 77 677643 22233333 5789999999999999999996 89999999999884 44 66789999
Q ss_pred ecCCcccccceeecCCcEEEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC--
Q 000657 317 SVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP-- 394 (1370)
Q Consensus 317 dl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp-- 394 (1370)
||++|+||+.|+.++++|+|||+|||++++++++.. ..+. .+|+.|++++++|||+||||+|||||||++|+|
T Consensus 282 di~~I~EL~~I~~~~~~l~IGA~vTl~el~~~l~~~--~~~~---~~~p~L~~~~~~vAs~qIRN~aTlGGNI~~Asp~~ 356 (1344)
T PLN00192 282 DIRHIPELSMIRRDEKGIEIGAVVTISKAIEALREE--SKSE---YVFKKIADHMEKIASRFVRNTGSIGGNLVMAQRKQ 356 (1344)
T ss_pred EcCCChhhhcEEecCCEEEEeecCcHHHHHHHHHhh--cccc---chHHHHHHHHHHhcChhhccceechhhhcccCCCC
Confidence 999999999999999999999999999999887643 1111 169999999999999999999999999999974
Q ss_pred -CCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhcccccccCCCCeEEEEEEccCCC------CccceeeeeecccC-cc
Q 000657 395 -ISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTR------PFEFVKEFKQAHRR-DD 466 (1370)
Q Consensus 395 -~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~------~~~~~~~~K~~~R~-~~ 466 (1370)
+||++|+|+||||+|+|.+.+| +|+||++|||.+ +.|++||||++|+||.+. ...+|..||+++|+ ++
T Consensus 357 p~sD~~p~LlAl~A~v~l~s~~g-~R~vpl~dFf~~---~~l~~~Eil~~I~iP~~~~~~~~~~~~~f~~yk~~~Rr~~~ 432 (1344)
T PLN00192 357 FPSDIATILLAAGSTVNIQNASK-REKLTLEEFLER---PPLDSKSLLLSVEIPSWTSSSGSDTKLLFETYRAAPRPLGN 432 (1344)
T ss_pred CchhHHHHHHHhCcEEEEEeCCc-eEEEeHHHHhcc---CccCCcceEEEEEccCCccccccCcccceeeeeeccccccc
Confidence 6999999999999999999999 999999999984 569999999999999653 34678889999997 88
Q ss_pred ccceeeeEEEEEEe-----cCCcceEEEEEEEEEccCCC-ccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCC
Q 000657 467 DIALVNAGMRVYLE-----EKDEEWVVSDALLVYGGVAP-LSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540 (1370)
Q Consensus 467 d~a~Vn~A~~~~~~-----~~~~~~~i~~~rIa~Ggva~-~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~ 540 (1370)
|||+||+||+++++ +++ +|+++||+||||+| +|+|++++|++|.||+|+++++++|.+++.+++.|.++
T Consensus 433 diA~V~aA~~v~~~~~~~~~~~---~i~~aria~Ggvap~~P~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~p~~~-- 507 (1344)
T PLN00192 433 ALPYLNAAFLAEVSQDASSGGI---VVNDCRLAFGAYGTKHAIRARKVEEFLTGKVLSDSVLYEAVRLLKGIVVPEDG-- 507 (1344)
T ss_pred chhhheeeEEEEEEecccCCCC---eEeEEEEEEecCCCCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCC--
Confidence 99999999999996 444 79999999999999 69999999999999999999999999999999987653
Q ss_pred CCChhhHHHhhHHHHHHHHHHHhhhccCCCCcccCC-------CcccccccccccCCCccccccccccCCCCccCCcccc
Q 000657 541 GGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESV-------PSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVH 613 (1370)
Q Consensus 541 ~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~-------~~~~~s~~~~~~r~~~~g~q~~~~~~~~~~iG~~~~r 613 (1370)
++|++||++|+.+||+|||+++++++.. ...+.. .+...|+...++||+++|.|.|++++++++||++++|
T Consensus 508 ~~s~eYRr~la~~l~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~vG~~~~r 585 (1344)
T PLN00192 508 TSHPEYRSSLAVGFLFDFLSPLIESNAK--SSNGWLDGGSNTKQNPDQHDDVKKPTLLLSSKQQVEENNEYHPVGEPIKK 585 (1344)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhccc--cccccccccccccccccccccccccCCCCCcceeeecccccCcCCCCCcC
Confidence 4799999999999999999999987621 000011 1233688889999999999999988999999999999
Q ss_pred cCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCC-CCCCCCC--CCcccccc
Q 000657 614 LSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQ-GDNRIGP--VVADEELF 690 (1370)
Q Consensus 614 ~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip-g~n~~g~--~~~d~~~l 690 (1370)
+|+..|+||+++|++|++++|||||+++||||++||||++||+++|+++|||++|+|++|+| +.+.+|. ...|+|+|
T Consensus 586 ~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~aV~t~~Dip~~~~~~g~~~~~~~~~~l 665 (1344)
T PLN00192 586 VGAALQASGEAVYVDDIPSPKNCLYGAFIYSTKPLARVKGIKFKSNLVPQGVLAVITFKDIPKGGQNIGSKTIFGPEPLF 665 (1344)
T ss_pred hhhHhhcccceecccccCCCCCCEEEEEEecCCCceEEEEEEhHHhhcCCCcEEEEchHHcCcccccCCCCCCCCCceec
Confidence 99999999999999999855899999999999999999999999999999999999999998 2333443 24589999
Q ss_pred ccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEee--c-CcCCCHHHHHhccCCCCC--CccccccCCcccccccCCCc
Q 000657 691 ASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEE--L-PAILSIQEAIDAKSFHPN--TERCFRKGDVDICFQSGQCD 765 (1370)
Q Consensus 691 a~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~--l-p~v~~~~~A~~~~a~~~~--~~~~~~~Gdv~~af~~~~a~ 765 (1370)
++++|||+|||||+|||+|+++|++|+++|+|+||+ | |+++|+++|+++++++.. .......||++++| ++|+
T Consensus 666 a~~~Vr~~Gq~Va~VvA~t~~~A~~Aa~~V~VeYe~~~l~p~v~~i~~Al~~~s~~~~~~~~~~~~~GD~~~af--~~a~ 743 (1344)
T PLN00192 666 ADEVTRCAGQRIALVVADTQKHADMAANLAVVEYDTENLEPPILTVEDAVKRSSLFEVPPFLYPKPVGDISKGM--AEAD 743 (1344)
T ss_pred cCCEEEEcCCeEEEEEECCHHHHHHHhccCEEEEecCCCCCcccCHHHHhcCCCCcccChhhcccccCCHHHHh--ccCC
Confidence 999999999999999999999999999999999997 4 999999999998875421 12334679999999 9999
Q ss_pred cEE-EEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccch
Q 000657 766 KII-EGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSA 844 (1370)
Q Consensus 766 ~vv-e~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~ 844 (1370)
++| |++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.....
T Consensus 744 ~vv~e~~~~~~~q~H~~mEp~~~vA~~~-~dg~l~V~~sTQ~p~~~r~~vA~~Lgip~~~VrV~~~~vGGgFGgK~~~~~ 822 (1344)
T PLN00192 744 HKILSAEIKLGSQYYFYMETQTALALPD-EDNCIVVYSSTQCPEYVHSVIARCLGIPEHNVRVITRRVGGGFGGKAVKSM 822 (1344)
T ss_pred eEEEEEEEEECCEeeeeccCceEEEEEc-CCCCEEEEECCCCHHHHHHHHHHHhCCChHHEEEEecccccCCCccccccc
Confidence 976 999999999999999999999998 577899999999999999999999999999999999999999999987667
Q ss_pred HHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccC
Q 000657 845 FIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSD 924 (1370)
Q Consensus 845 ~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~ 924 (1370)
+++++||++|+++||||||+|||+|+|..+++|||+.++||+|+++||+|+|++++++.|+|+|.+.+. ++...+.+..
T Consensus 823 ~~~~~aAlaA~~~gRPVr~~~sR~Edm~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~ 901 (1344)
T PLN00192 823 PVATACALAAFKLQRPVRMYLNRKTDMIMAGGRHPMKITYSVGFKSDGKITALHLDILINAGISPDISP-IMPRNIIGAL 901 (1344)
T ss_pred hHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEEEEEEEECCCCCEEEEEEEEEEecccCCCcch-HHHHHHhhcC
Confidence 788999999999999999999999999999999999999999999999999999999999999987664 3344455677
Q ss_pred CCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCcc-ccCcc---ccCC
Q 000657 925 NVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSIL-HYGQQ---LQHC 1000 (1370)
Q Consensus 925 ~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~-~~g~~---~~~~ 1000 (1370)
++|+|||++++++.|+||++|+|||||||.+|++|++|++||++|++|||||+|||++|++++++.. +++++ ++++
T Consensus 902 ~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~ 981 (1344)
T PLN00192 902 KKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIAEAIIEHVASTLSMDVDSVRKINLHTYESLKLFYGDSAGEPSEY 981 (1344)
T ss_pred CCcCCCceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHhcCCCccccccCCCCcccccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999765432 44444 3688
Q ss_pred CHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCccCCcch
Q 000657 1001 TLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080 (1370)
Q Consensus 1001 ~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~ 1080 (1370)
.+++||+++++.++|++|++++++||+.|+|+|||+++++..|++++ +++.+.|+|+.||+|+|.+|++|||||+
T Consensus 982 ~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGig~~~~~~~~~~-----~~~~a~v~i~~DGsv~v~~G~~e~GQG~ 1056 (1344)
T PLN00192 982 TLPSIWDKLASSSEFKQRTEMVKEFNRSNKWKKRGISRVPIVHEVML-----RPTPGKVSILSDGSIAVEVGGIEIGQGL 1056 (1344)
T ss_pred cHHHHHHHHHHhcChHHHHHHHHHHhhcCCceEEEEEEEEEEEeccc-----cCCceEEEEeCCceEEEEECCCCCCCCH
Confidence 99999999999999999988888899999999999999999998754 2467999999999999999999999999
Q ss_pred HHHHHHHHHHHhCC--------CcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC----CC
Q 000657 1081 HTKVAQVAASAFNI--------PLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH----NF 1148 (1370)
Q Consensus 1081 ~T~~~qiaAe~Lgi--------p~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~----~~ 1148 (1370)
+|+++||||++||| |+|+|+|..+||+.+|++++|+|||+|+++|.||++||++|++||+++++++ ..
T Consensus 1057 ~T~~aQiaA~~LGi~~~~~~~ip~e~I~v~~~dT~~~p~~~~t~gSr~t~~~G~Av~~Ac~~l~~rl~~~a~~~~~~~~~ 1136 (1344)
T PLN00192 1057 WTKVKQMAAFGLGMIKCDGGEDLLDKIRVIQSDTLSMIQGGFTAGSTTSESSCEAVRLCCVILVERLKPIKERLQEQMGS 1136 (1344)
T ss_pred HHHHHHHHHHHhCCccccccCCChhhEEEEecCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999995 9999999999999999999999999999999999999999999999998887 56
Q ss_pred CCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEEEecCcccCccc
Q 000657 1149 NSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAI 1228 (1370)
Q Consensus 1149 ~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~iNP~~ 1228 (1370)
.+|++++..+|..+.+|+++++|.++. .++.||+||++++|||||++||+++|+|+++++|||++|||++
T Consensus 1137 ~~~~~~~~~a~~~~~~L~a~~~~~~~~----------~~~~y~~~ga~~~eVEVD~~TG~v~vlr~~~~~D~G~~INP~i 1206 (1344)
T PLN00192 1137 VTWDMLISQAYMQSVNLSASSYYTPDP----------SSMEYLNYGAAVSEVEVDLLTGETTILRSDIIYDCGQSLNPAV 1206 (1344)
T ss_pred cCHHHHHHHhcCCCCCeEEEEEECCCC----------CCccccceeEEEEEEEEecCCCcEEEEEEEEEEecCcccCHHH
Confidence 899999988876677899999985321 0134789999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCC-CCCCCCCCCcCCCc
Q 000657 1229 DVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHP-NVKAIHSSKAVGEP 1307 (1370)
Q Consensus 1229 ~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~-~~~~p~gaKGvGE~ 1307 (1370)
++|||||||+|||||+|+|++.||+ +|+++|++|++|+||++.|||.+|+|.++++ + +|.+|||+||+||+
T Consensus 1207 ~~GQIeGg~vqGiG~al~Ee~~yd~-------~G~llt~~~~dY~iPt~~DiP~~~~v~~~e~-~~~~~~p~gaKgvGE~ 1278 (1344)
T PLN00192 1207 DLGQIEGAFVQGIGFFMLEEYTTNS-------DGLVVTDGTWTYKIPTVDTIPKQFNVEILNS-GHHKKRVLSSKASGEP 1278 (1344)
T ss_pred HHHHHHHHHHHHHhHHhceeEEECC-------CCCCCCCChhhcCCCcccccCCceEEEEEeC-CCCCCCCCccccCccC
Confidence 9999999999999999999999998 8999999999999999999996699999997 6 58899999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHh---cC----CCcccCCCCCCCHHHHHHHhcccccccccC
Q 000657 1308 PFFLASSVFFAIKDAISAARAD---AG----HTGWFPLDNPATPERIRMACLDEFTAPFIN 1361 (1370)
Q Consensus 1308 ~~~~a~av~~AI~nAi~~A~~~---~G----~~~~~~~~lP~tpe~I~~a~~~~~~~~~~~ 1361 (1370)
|+++++++++||+|||++||++ .| ...+|..+.|+|||+|+++|.+++++.+..
T Consensus 1279 ~~~~~~~v~~Ai~~Ai~~Ar~~~~~~g~~~~~~~~~~l~~pat~e~i~~~~~~~~~~~~~~ 1339 (1344)
T PLN00192 1279 PLLLAASVHCATRAAIREARKQLLSWGGIDGSDSTFQLPVPATMPVVKELCGLDVVERYLE 1339 (1344)
T ss_pred cccccHHHHHHHHHHHHHHHhhhcccCCcccCCCceecCCCCChHHHHHhcCChHHHHhhh
Confidence 9999999999999999999999 78 777899999999999999999999887543
No 5
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=100.00 E-value=6.1e-187 Score=1785.70 Aligned_cols=870 Identities=25% Similarity=0.334 Sum_probs=771.1
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccC-CCCCCCCceEEEEccccccCCcccceeecccccchhccCCc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLG-CGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~g-C~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1370)
|.|+|+|||++++++ ++|+++||++||++||||||.| |++|.||||||+||+ ++|+||++|+.+++|+
T Consensus 1 ~~i~~~vNg~~~~~~-~~~~~~l~~~LR~~~~~~~k~g~c~~g~CGaCtv~~dg----------~~v~sC~~~~~~~~g~ 69 (956)
T PRK09800 1 MIIHFTLNGAPQELT-VNPGENVQKLLFNMGMHSVRNSDDGFGFAGSDAIIFNG----------NIVNASLLIAAQLEKA 69 (956)
T ss_pred CeEEEEECCEEEEEe-cCCCCCHHHHHHHCCCCccccCCCCcccCCCCEEEECC----------eEEeHHHHHHHHcCCC
Confidence 468999999999997 9999999999999999999998 899999999999996 8999999999999999
Q ss_pred EEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHH
Q 000657 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1370)
Q Consensus 98 ~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1370)
+|+|||||+ ..+.|||+|+||++++++|||||||||||++++||++||.| +++||+++|+|||||||||++|++|++.
T Consensus 70 ~i~Tvegl~-~~~~~~~~q~af~~~~~~QCG~CtpG~~m~~~~ll~~~~~p-~~~~i~~~l~gnlCRCtgy~~i~~av~~ 147 (956)
T PRK09800 70 DIRTAESLG-KWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAP-TREEIDDALSGLFSRDAGWQQYYQVIEL 147 (956)
T ss_pred EEEecCCcC-CCCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCCC-CHHHHHHHHhhchhccCCcHHHHHHHHH
Confidence 999999998 56789999999999999999999999999999999999999 9999999999999999999999999987
Q ss_pred HHhcccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCCCCCCChhhhc
Q 000657 178 FAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLL 257 (1370)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 257 (1370)
++.... + .
T Consensus 148 ~~~~~~---------------------~---------------~------------------------------------ 155 (956)
T PRK09800 148 AVARKN---------------------N---------------P------------------------------------ 155 (956)
T ss_pred HHHhhc---------------------c---------------c------------------------------------
Confidence 652100 0 0
Q ss_pred cCCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEc
Q 000657 258 RKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 337 (1370)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IG 337 (1370)
.
T Consensus 156 ---------~---------------------------------------------------------------------- 156 (956)
T PRK09800 156 ---------Q---------------------------------------------------------------------- 156 (956)
T ss_pred ---------c----------------------------------------------------------------------
Confidence 0
Q ss_pred ccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCC
Q 000657 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGN 417 (1370)
Q Consensus 338 A~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~ 417 (1370)
. .. -
T Consensus 157 -------------~---~~-----------------------------------------------------------~- 160 (956)
T PRK09800 157 -------------A---TI-----------------------------------------------------------D- 160 (956)
T ss_pred -------------c---cc-----------------------------------------------------------c-
Confidence 0 00 0
Q ss_pred eEEEehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEcc
Q 000657 418 IRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGG 497 (1370)
Q Consensus 418 ~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Gg 497 (1370)
..
T Consensus 161 ---------------------------------------------------------------~~--------------- 162 (956)
T PRK09800 161 ---------------------------------------------------------------IA--------------- 162 (956)
T ss_pred ---------------------------------------------------------------cc---------------
Confidence 00
Q ss_pred CCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccCCCCcccCCC
Q 000657 498 VAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVP 577 (1370)
Q Consensus 498 va~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~~ 577 (1370)
T Consensus 163 -------------------------------------------------------------------------------- 162 (956)
T PRK09800 163 -------------------------------------------------------------------------------- 162 (956)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccCCCccccccccccCCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecch
Q 000657 578 STHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDS 657 (1370)
Q Consensus 578 ~~~~s~~~~~~r~~~~g~q~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s 657 (1370)
.+.+++++.||++++|+|++.||||+++|++|+.+ |||||++++|||++||||++||+|
T Consensus 163 --------------------~~~~~~~~~VGk~~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~vvrSp~ahArI~sID~s 221 (956)
T PRK09800 163 --------------------PTFRDDLEVIGKHYPKTDAAKMVQAKPCYVEDRVT-ADACVIKMLRSPHAHALITHLDVS 221 (956)
T ss_pred --------------------cccccccccCCCCCCCcChHhhCcccccccccCCC-CCCEEEEEeecCCCcEEEeeeEHH
Confidence 00012335699999999999999999999999987 799999999999999999999999
Q ss_pred hccCCCCEEEEEecCCCCC------CCCCCCCCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCC
Q 000657 658 GARSSPGFVGIFFAEDVQG------DNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAIL 731 (1370)
Q Consensus 658 ~A~~~pGVv~Vvt~~Dipg------~n~~g~~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~ 731 (1370)
+|++||||++|+|++|+|. .+.++...+++++|++++|||+|||||+|||+|+++|++|+++|+|+||+||+++
T Consensus 222 ~A~a~pGV~~Vvt~~Dvp~~~~~~~~~~~~~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~V~Veye~Lp~v~ 301 (956)
T PRK09800 222 KAEALPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYEVLKPVM 301 (956)
T ss_pred HHHhCCCeEEEEcHHHCCcccccccCcCCCCCCCCCccccCCeEEEcCCeEEEEEECCHHHHHHHhcCCceEEEeCCccC
Confidence 9999999999999999983 1222222223445669999999999999999999999999999999999999999
Q ss_pred CHHHHHhccCC--CCC-----------------------------------------CccccccCCcccccccCCCccEE
Q 000657 732 SIQEAIDAKSF--HPN-----------------------------------------TERCFRKGDVDICFQSGQCDKII 768 (1370)
Q Consensus 732 ~~~~A~~~~a~--~~~-----------------------------------------~~~~~~~Gdv~~af~~~~a~~vv 768 (1370)
|+++|+++++. |+. ......+||++++| ++|++||
T Consensus 302 d~~~Al~~~a~~vh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af--~~a~~vv 379 (956)
T PRK09800 302 SIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGF--ADADVII 379 (956)
T ss_pred CHHHHhcCCCceecccccccccccccccccccccccccccccccccccccCCCCceeeeccccCCCHHHHH--hhCCEEE
Confidence 99999988763 321 01224679999999 9999999
Q ss_pred EEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccchHHHH
Q 000657 769 EGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAA 848 (1370)
Q Consensus 769 e~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~~~ 848 (1370)
|++|++++|+|++|||++|+|+|+ +|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+.. .+.
T Consensus 380 e~~y~~~~~~H~~mEp~~aiA~~d--~~~l~v~~stQ~p~~~r~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~--~e~ 455 (956)
T PRK09800 380 ERTYNSTQAQQCPTETHICFTRMD--GDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDIL--LEE 455 (956)
T ss_pred EEEEEeCCcccccCCCceEEEEEe--CCeeEEEECCCcHHHHHHHHHHHHCCCHHHeEEEcCCCCccCcCccccc--HHH
Confidence 999999999999999999999997 4689999999999999999999999999999999999999999998643 456
Q ss_pred HHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcc
Q 000657 849 AAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYE 928 (1370)
Q Consensus 849 ~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ 928 (1370)
.||++|+++||||||+|||+|+|.++++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+...+..+..++|+
T Consensus 456 ~aA~aA~~~grPVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ 535 (956)
T PRK09800 456 VCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYP 535 (956)
T ss_pred HHHHHHHHhCCCEEEEeeHHHHhhCcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcCCCcchHHHHHHHhhcCcCcc
Confidence 68999999999999999999999999999999999999999999999999999999999988777777666666779999
Q ss_pred cCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCcccc-----------Ccc-
Q 000657 929 IPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHY-----------GQQ- 996 (1370)
Q Consensus 929 ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~~-----------g~~- 996 (1370)
|||++++++.|+||++|+|+|||||.+|+.||+|++||++|++|||||+|||+||++++|+.+++ +.+
T Consensus 536 ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~Es~mDelA~~lg~DPve~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~ 615 (956)
T PRK09800 536 CDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPS 615 (956)
T ss_pred cceEEEEEEEEECCCCCCCCcCCCCcchHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999998887543 222
Q ss_pred ccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcc-eeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCcc
Q 000657 997 LQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWK-KRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVE 1075 (1370)
Q Consensus 997 ~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~-grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e 1075 (1370)
++++.+.+||++++++++|+++++ .+++|+ |+|+++.+..+|++. .+.+.+.|+|++||+|+|.+|++|
T Consensus 616 ~~s~~~~~~L~~~~e~~~w~~~~~------~~g~~~~G~Gia~~~~~~g~~~----~~~~~a~v~l~~dGsv~v~~g~~e 685 (956)
T PRK09800 616 AASCALEEILRQGREMIQWSSPKP------QNGDWHIGRGVAIIMQKSGIPD----IDQANCMIKLESDGTFIVHSGGAD 685 (956)
T ss_pred ccCCCHHHHHHHHHHhcCcchhhh------hcCCCeeEEEEEEEEEcccCCC----CCCceEEEEECCCceEEEEECCCC
Confidence 567889999999999999987532 134554 777777655444331 246789999999999999999999
Q ss_pred CCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC---------
Q 000657 1076 MGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH--------- 1146 (1370)
Q Consensus 1076 ~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~--------- 1146 (1370)
||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+..++++
T Consensus 686 ~GqG~~T~~~QiaAe~LGip~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~ 765 (956)
T PRK09800 686 IGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQ 765 (956)
T ss_pred CCccHHHHHHHHHHHHHCCCceeEEEEeCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEE
Confidence 99999999999999999999999999999999999999999999999999999999999999998876653
Q ss_pred -----------CCCCHHHHHHHhhcc--cccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEE
Q 000657 1147 -----------NFNSFAELASACYVQ--RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRM 1213 (1370)
Q Consensus 1147 -----------~~~~~~~~~~~a~~~--~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r 1213 (1370)
..++|.+++..++.. ..++.++++|..|. .+|+|+|+++|||||++||+++|+|
T Consensus 766 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------------~~~~~~a~~aeVeVD~~TG~vkvl~ 832 (956)
T PRK09800 766 LATPGVVRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPD-------------FAFPYGANFAEVAVNTRTGEIRLDK 832 (956)
T ss_pred EecCCEEeCCCCcccHHHHHHHHhcCCCCCCeEEEEEecCCC-------------CCcceEEEEEEEEEECCCCcEEEEE
Confidence 114699988776543 23577777775432 2578999999999999999999999
Q ss_pred EEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCC
Q 000657 1214 ANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHP 1293 (1370)
Q Consensus 1214 ~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~ 1293 (1370)
+++++|||++|||.+++||||||++||||++|+|++.||+ +|+++|.+|++|++|++.|+|.+|+++++|+ +
T Consensus 833 ~~~~~D~G~vINP~~v~gQieGgi~qGiG~AL~Ee~~~d~-------~G~~~~~~l~~Y~iPt~~DiP~~i~v~~ve~-~ 904 (956)
T PRK09800 833 FYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDA-------EGHPLTRDLRSYGAPKIGDIPRDFRAVLVPS-D 904 (956)
T ss_pred EEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCCcEECC-------CCcCCCCCcccCCCCChhhCCCceEEEEEcC-C
Confidence 9999999999999999999999999999999999999998 7999999999999999999994499999997 9
Q ss_pred CCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000657 1294 NVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1353 (1370)
Q Consensus 1294 ~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~ 1353 (1370)
+|.+|||+||+||+++++ +++||+|||++|+ |++ ++++|+|||+||+++.+
T Consensus 905 ~~~~p~GaKgvGE~~~~~---~a~AIanAI~~A~---G~r---~~~lP~tpe~vl~al~~ 955 (956)
T PRK09800 905 DKVGPFGAKSISEIGVNG---AAPAIATAIHDAC---GIW---LREWHFTPEKILTALEK 955 (956)
T ss_pred CCCCCCCCcccCCCcccc---hHHHHHHHHHHHh---CcC---cccCCCCHHHHHHHHhh
Confidence 999999999999999975 5789999999987 887 69999999999999863
No 6
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=100.00 E-value=2.6e-184 Score=1763.90 Aligned_cols=865 Identities=26% Similarity=0.358 Sum_probs=763.3
Q ss_pred EEECCEEEEeccCCCCCcHHHHHhhCCCCcccc-CCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEE
Q 000657 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKL-GCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVIT 101 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~-gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 101 (1370)
|+|||++++++ ++|+++|+++||++||||+|. ||++|.|||||||||+ ++|+||++|+.+++|++|+|
T Consensus 1 ~~~Ng~~~~~~-~~~~~~l~~~LR~~~l~~~k~~~c~~g~CGaCtv~~dg----------~~v~sC~~~~~~~~g~~i~T 69 (951)
T TIGR03313 1 FTLNGAPQTLE-CKLGENVQTLLFNMGMHSVRNSDDGFGFAGSDAILFNG----------VLKNASLLIAAQLEGAEVRT 69 (951)
T ss_pred CEECCEEEEEe-cCCCCCHHHHHHHCCCCCCcCCCCCcccCCCCEEEECC----------eEeeHHHHHHHHcCCCEEEe
Confidence 78999999997 999999999999999999999 7999999999999996 89999999999999999999
Q ss_pred eccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHHHhc
Q 000657 102 VEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKT 181 (1370)
Q Consensus 102 vEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~ 181 (1370)
||||+ ..+.|||+|+||++++++|||||||||||++++||++||.| +++||+++|+|||||||||++|++|++.++..
T Consensus 70 iegl~-~~~~~~~~q~af~~~~a~QCG~CtpG~~~~~~~ll~~~~~p-~~~~i~~~l~gnlcrctgy~~i~~av~~~~~~ 147 (951)
T TIGR03313 70 AESLG-QWNQLSLVQQAMVDVGVVQSGYNDPAAALILTDLLDRNTQP-NRAEIDDALSGLFSRDAGYQQFYQVIELAVKR 147 (951)
T ss_pred cCcCC-CCCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCCC-CHHHHHHHHhcceeccCCcHHHHHHHHHHHHh
Confidence 99998 56789999999999999999999999999999999999999 99999999999999999999999999866521
Q ss_pred ccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCCCCCCChhhhccCCC
Q 000657 182 NDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRKSN 261 (1370)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~ 261 (1370)
.. + .
T Consensus 148 ~~---------------------~---------------~---------------------------------------- 151 (951)
T TIGR03313 148 LK---------------------D---------------P---------------------------------------- 151 (951)
T ss_pred cc---------------------c---------------c----------------------------------------
Confidence 00 0 0
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEccccc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVR 341 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vT 341 (1370)
.+
T Consensus 152 ----~~-------------------------------------------------------------------------- 153 (951)
T TIGR03313 152 ----EH-------------------------------------------------------------------------- 153 (951)
T ss_pred ----cc--------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEE
Q 000657 342 LTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTT 421 (1370)
Q Consensus 342 l~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~v 421 (1370)
+ . -
T Consensus 154 ---------~---~------------------------------------------------------------~----- 156 (951)
T TIGR03313 154 ---------K---Q------------------------------------------------------------S----- 156 (951)
T ss_pred ---------c---c------------------------------------------------------------c-----
Confidence 0 0 0
Q ss_pred ehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCc
Q 000657 422 MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPL 501 (1370)
Q Consensus 422 pl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~ 501 (1370)
..
T Consensus 157 -----------------------------------------------------------~~------------------- 158 (951)
T TIGR03313 157 -----------------------------------------------------------IA------------------- 158 (951)
T ss_pred -----------------------------------------------------------cc-------------------
Confidence 00
Q ss_pred cccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccCCCCcccCCCcccc
Q 000657 502 SLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHL 581 (1370)
Q Consensus 502 p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~~~~~~ 581 (1370)
+ .
T Consensus 159 ----------------------------------~-~------------------------------------------- 160 (951)
T TIGR03313 159 ----------------------------------P-E------------------------------------------- 160 (951)
T ss_pred ----------------------------------C-c-------------------------------------------
Confidence 0 0
Q ss_pred cccccccCCCccccccccccCCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccC
Q 000657 582 SAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARS 661 (1370)
Q Consensus 582 s~~~~~~r~~~~g~q~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~ 661 (1370)
.+++++.|||+++|+|++.||||+++|++|+.+ |||||++++|||++||||++||+|+|++
T Consensus 161 ------------------~~~~~~~iGk~~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~v~rSP~ahArI~sID~s~A~a 221 (951)
T TIGR03313 161 ------------------FRDDLTIIGKNCPKIDAAKMVQAKPCYVEDRVP-ADACVIKMLRSPHPHAWITHLDVSKAEA 221 (951)
T ss_pred ------------------cccccccCCCCCcCcChHhhCccCccccccCCC-CCCEEEEEEecCCCcEEEEeeEHHHHHh
Confidence 002334699999999999999999999999987 7999999999999999999999999999
Q ss_pred CCCEEEEEecCCCCC------CCCCCCCCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHH
Q 000657 662 SPGFVGIFFAEDVQG------DNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQE 735 (1370)
Q Consensus 662 ~pGVv~Vvt~~Dipg------~n~~g~~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~ 735 (1370)
||||++|+|.+|+|. .+.++....++++|++++|||+|||||+|+|+|+|+|++|+++|+|+||+||+++|+++
T Consensus 222 ~pGV~~Vvt~~D~p~~~~~~~~~~~~~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~I~Veye~Lp~v~d~~~ 301 (951)
T TIGR03313 222 LPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGQKMRHVGDRVAAVVAESEEIALHALKLIEVEYDVLTPVMSIDE 301 (951)
T ss_pred CCCeEEEEeHHHCCccccCCCCccCCCCCCCcccccCCeEEEcCCEEEEEEECCHHHHHHHhcCCeeEEEeCCccCCHHH
Confidence 999999999999983 12222112344557899999999999999999999999999999999999999999999
Q ss_pred HHhccCC--CCCC-----------------------------------------ccccccCCcccccccCCCccEEEEEE
Q 000657 736 AIDAKSF--HPNT-----------------------------------------ERCFRKGDVDICFQSGQCDKIIEGEV 772 (1370)
Q Consensus 736 A~~~~a~--~~~~-----------------------------------------~~~~~~Gdv~~af~~~~a~~vve~~y 772 (1370)
|+++++. |+.. .....+||++++| ++|+++||++|
T Consensus 302 Al~~~ap~ih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af--~~A~~vve~~y 379 (951)
T TIGR03313 302 AMAAEAPIVHDEPIVYGAGAPDDLEEQNANADPRGEHMIINFPIGSRPRKNIAASVHGHIGDLNKGF--AEADVIIERTY 379 (951)
T ss_pred HhcCCCCeeccccccccccccccccccccccccccccccccccccccCCCceeeeccccCCCHHHHH--hcCCEEEEEEE
Confidence 9988773 3210 1124679999999 99999999999
Q ss_pred EECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccchHHHHHHHH
Q 000657 773 RVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAV 852 (1370)
Q Consensus 773 ~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAl 852 (1370)
++++|+|++|||++|+|+|+ +|+++||+|||+|+.+|..||++||||++||||+.+++|||||+|.+.. .+..||+
T Consensus 380 ~~~~~~H~~mEp~~aiA~~d--~~~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~--~e~~aA~ 455 (951)
T TIGR03313 380 ESTQAQQCPTETHICFTYMD--GERLVIHASTQVPWHVRRQVARIVGMKQHKVHVIKERVGGGFGSKQDIL--LEEVCAW 455 (951)
T ss_pred EECCEeeecCCCceEEEEEc--CCeEEEEECCcCHHHHHHHHHHHHCCCHHHeEEEcCCCCcCcCCccccc--HHHHHHH
Confidence 99999999999999999997 4689999999999999999999999999999999999999999998643 4456899
Q ss_pred HHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeE
Q 000657 853 PSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNV 932 (1370)
Q Consensus 853 aA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~ 932 (1370)
+|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+...+.....++|+|||+
T Consensus 456 aA~~~GrPVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~A~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~ 535 (951)
T TIGR03313 456 ATWVTGRPVYFRYTREEEFICNTSRHVAKVTVKLGAKKDGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLPLYPCDNV 535 (951)
T ss_pred HHHHhCCCEEEEeeHHHHhhccCCCCCeEEEEEEEECCCCcEEEEEEEEEEcCccCcccchHHhhhhhhhcCcCccCCeE
Confidence 99999999999999999999999999999999999999999999999999999999876665554444556689999999
Q ss_pred EEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCccc-----------cCcc-ccCC
Q 000657 933 RIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILH-----------YGQQ-LQHC 1000 (1370)
Q Consensus 933 r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~-----------~g~~-~~~~ 1000 (1370)
+++++.++||++|.|+|||||.+|+.|++|++||++|++|||||+|||+||++++|+.++ ++.+ ++++
T Consensus 536 ~~~~~~v~TN~~p~ga~Rg~G~~q~~fa~Es~mDelA~~lG~DP~e~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~~~s~ 615 (951)
T TIGR03313 536 DFRVTTYYSNICPTGAYQGYGAPKGNFALTMAMAELAEELGIDQLEMIETNRVHEGQELKILGAIGEGKMPTSVPKAASC 615 (951)
T ss_pred EEEEEEEECCCCCCCCcCCCCcccHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999999998763 2223 4577
Q ss_pred CHHHHHHHHHHhcCChhhhHhhhhcccCCCcc-eeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCccCCcc
Q 000657 1001 TLFPLWNELKLSCDFLNARKEVDNFNLNNRWK-KRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQG 1079 (1370)
Q Consensus 1001 ~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~-grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG 1079 (1370)
.+.+||++++++++|+++++ .+++|+ |+|+|+....+|++. .+.+.+.|+|++||+|+|.+|++|||||
T Consensus 616 ~~~~~l~~~~~~~~w~~~~~------~~g~~~~G~Gia~~~~~~g~~~----~~~~~a~v~l~~dG~v~v~~g~~e~GqG 685 (951)
T TIGR03313 616 ALEEILRQGRELIEWDSPKQ------AKGDWKIGRGVAIIMQKSGIPD----IDQANCMIKLESDGTFIVHSGGADIGTG 685 (951)
T ss_pred cHHHHHHHHHHhcCccchhh------hccCceeeeEEEEEEecccCCC----CCCccEEEEEcCCceEEEEECCCCCCcc
Confidence 89999999999999987542 235554 777776554444331 2467899999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC-------------
Q 000657 1080 LHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH------------- 1146 (1370)
Q Consensus 1080 ~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~------------- 1146 (1370)
+.|+++||+||+||+|+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+..++++
T Consensus 686 ~~T~~~QiaAe~LGvp~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~~ 765 (951)
T TIGR03313 686 LDTVVSKLTAEVLHCPMDDVHVISGDTDHALFDKGAYASSGTCFSGNAAKRAAENLREKILFHGAEMLGEPVADVDLAAP 765 (951)
T ss_pred HHHHHHHHHHHHHCCCHHhEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999998876643
Q ss_pred -------CCCCHHHHHHHhhcc--cccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEE
Q 000657 1147 -------NFNSFAELASACYVQ--RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVI 1217 (1370)
Q Consensus 1147 -------~~~~~~~~~~~a~~~--~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~ 1217 (1370)
..++|++++..++.. ..++...+.|..+. .+|+|+|+++|||||++||+++|+|++++
T Consensus 766 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~a~~aeVeVD~~TG~vkv~r~~~~ 832 (951)
T TIGR03313 766 GLVRGKTGEVSYFDIAHKAETGTGFGQLVGTGSYITSE-------------FAFPYGANFAEVAVNTRTGEIRLDKFYAL 832 (951)
T ss_pred CEEeCCCCcccHHHHHHHHhccCCCCCeEEEEEecCCC-------------CCccceeEEEEEEEECCCCcEEEEEEEEE
Confidence 114688887665532 23466666664321 25789999999999999999999999999
Q ss_pred EecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCCCCCC
Q 000657 1218 LDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKA 1297 (1370)
Q Consensus 1218 ~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~~~~~ 1297 (1370)
+|||++|||.+++||||||++||||++|+|++.||+ +|+++|.+|++|++|++.|+|.+|++.++++ ++|.+
T Consensus 833 ~D~G~~INP~~v~gQieGg~~qGiG~AL~Ee~~~d~-------~G~~~~~~l~~Y~iPt~~D~P~~~~v~~ve~-~~~~~ 904 (951)
T TIGR03313 833 LDCGTPVNPELALGQIYGATMRAIGHSMTEEIVYDD-------NGIPLTRDLKSYGAPKIGDIPRDFRAVLVPS-DDKVG 904 (951)
T ss_pred EECCcccCHHHHHHHHHHHHHHHHHHHHhCCcEECC-------CCcCCCCChhhCCCCChHhCCCceEEEEEcC-CCCCC
Confidence 999999999999999999999999999999999998 7999999999999999999994499999997 89999
Q ss_pred CCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhc
Q 000657 1298 IHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACL 1352 (1370)
Q Consensus 1298 p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~ 1352 (1370)
|||+||+||+++++ +++||+|||++|+ |++ ++++|+|||+||++++
T Consensus 905 p~GaKGiGE~~~~~---~apAIanAI~dA~---G~r---~~~lP~tPe~vl~al~ 950 (951)
T TIGR03313 905 PYGAKSISEIGVNG---AAPAIATAIHDAC---GVW---LRDWHFTPEKILKGLN 950 (951)
T ss_pred CCCCcccCCCcccc---hHHHHHHHHHHHh---Ccc---cccCCCCHHHHHHHhh
Confidence 99999999999975 5788999999887 987 6999999999999875
No 7
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=100.00 E-value=9.6e-178 Score=1695.17 Aligned_cols=832 Identities=30% Similarity=0.436 Sum_probs=729.1
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEE
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHV 99 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 99 (1370)
++|+|||+.++ ++|+++||+|||++ ||||||.||++|.|||||||||+ ++|+||++|+.+++|++|
T Consensus 1 ~~~~~ng~~~~---~~~~~~l~~~lr~~~~~~~~k~gc~~g~cgactv~~dg----------~~~~sc~~~~~~~~g~~i 67 (848)
T TIGR03311 1 YEFIVNGREVD---VNEEKKLLEFLREDLRLTGVKNGCGEGACGACTVIVNG----------KAVRACRFTTAKLAGKEI 67 (848)
T ss_pred CEEEECCEEee---CCCCCcHHHHHHHhcCCCcCCCCCCCCCCCCcEEEECC----------eEEehhhhhHHhcCCCEE
Confidence 36999998553 66999999999995 99999999999999999999996 899999999999999999
Q ss_pred EEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHHH
Q 000657 100 ITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFA 179 (1370)
Q Consensus 100 ~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~ 179 (1370)
+|||||+ . ..+||+|+||+++|++|||||||||||++++||+++|.| +++||+++|+|||||||||++|++|++.++
T Consensus 68 ~T~egl~-~-~~~~~~q~a~~~~~~~qcG~ctpg~~~~~~~ll~~~~~p-~~~~i~~~l~gnlcrctgy~~i~~a~~~~~ 144 (848)
T TIGR03311 68 TTVEGLT-E-REKDVYAWAFAKAGAVQCGFCIPGMVISAKALLDKNPNP-TEAEIKKALKGNICRCTGYVKIIKAVRLAA 144 (848)
T ss_pred EecCCCC-C-CCCCHHHHHHHHcCCCcCCCCchhHHHHHHHHHhcCCCC-CHHHHHHHHhcCccccCChHHHHHHHHHHH
Confidence 9999998 3 357999999999999999999999999999999999999 999999999999999999999999998665
Q ss_pred hcccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCCCCCCChhhhccC
Q 000657 180 KTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRK 259 (1370)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 259 (1370)
.... +
T Consensus 145 ~~~~---------------------~------------------------------------------------------ 149 (848)
T TIGR03311 145 KAFR---------------------E------------------------------------------------------ 149 (848)
T ss_pred Hhhc---------------------c------------------------------------------------------
Confidence 2100 0
Q ss_pred CCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEccc
Q 000657 260 SNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAA 339 (1370)
Q Consensus 260 ~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~ 339 (1370)
.
T Consensus 150 -------~------------------------------------------------------------------------ 150 (848)
T TIGR03311 150 -------E------------------------------------------------------------------------ 150 (848)
T ss_pred -------c------------------------------------------------------------------------
Confidence 0
Q ss_pred ccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeE
Q 000657 340 VRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIR 419 (1370)
Q Consensus 340 vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R 419 (1370)
. +
T Consensus 151 -----------~----------------------------------------------------------------~--- 152 (848)
T TIGR03311 151 -----------I----------------------------------------------------------------E--- 152 (848)
T ss_pred -----------c----------------------------------------------------------------c---
Confidence 0 0
Q ss_pred EEehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCC
Q 000657 420 TTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVA 499 (1370)
Q Consensus 420 ~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva 499 (1370)
++. ..
T Consensus 153 -----------------------------~~~------------------------------~~---------------- 157 (848)
T TIGR03311 153 -----------------------------PPR------------------------------GE---------------- 157 (848)
T ss_pred -----------------------------ccc------------------------------cc----------------
Confidence 000 00
Q ss_pred CccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccCCCCcccCCCcc
Q 000657 500 PLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPST 579 (1370)
Q Consensus 500 ~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~~~~ 579 (1370)
T Consensus 158 -------------------------------------------------------------------------------- 157 (848)
T TIGR03311 158 -------------------------------------------------------------------------------- 157 (848)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCccccccccccCCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhc
Q 000657 580 HLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGA 659 (1370)
Q Consensus 580 ~~s~~~~~~r~~~~g~q~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A 659 (1370)
.. ..||++++|+|+.+||||+++|++|+.+ |||||++++|||++||+|++||+|+|
T Consensus 158 ----------------------~~-~~iG~~~~R~d~~~kvtG~~~Y~~Di~~-pgmL~a~~vrSp~ahA~I~~ID~s~A 213 (848)
T TIGR03311 158 ----------------------PK-GKLGENFPRVDAVPKVLGEGVYVDDMQI-EGMLYGSALRSKYPRALVKSIDITVA 213 (848)
T ss_pred ----------------------cc-CCCCCccCCcChhhhCcccccccccCCC-CCCEEEEEEeCCCCCEEEEeeEHHHH
Confidence 00 1389999999999999999999999998 79999999999999999999999999
Q ss_pred cCCCCEEEEEecCCCCCCCCCCCCCccccc-cc-cCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHH
Q 000657 660 RSSPGFVGIFFAEDVQGDNRIGPVVADEEL-FA-SEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAI 737 (1370)
Q Consensus 660 ~~~pGVv~Vvt~~Dipg~n~~g~~~~d~~~-la-~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~ 737 (1370)
++||||++|+|++|+|+.+.+|....+++. |+ +++|||+|||||+|+|+|+++|++|+++|+|+||+||+++|+++|+
T Consensus 214 ~a~PGV~aVvt~~Dip~~~~~g~~~~~~~~~~a~~~~Vry~Ge~VA~VvA~t~~~A~~A~~~V~Veye~lp~v~d~~~A~ 293 (848)
T TIGR03311 214 LKHPGVVAVLTAKDIPGNRKIGHIFKDWPALIAVGEITRYVGDAVALVAAKSKEALREALNLIKVDYEELPPLTSPEEAL 293 (848)
T ss_pred HhCCCcEEEEeHHHCCCccCCCCCCCCccccccCCCEEEEcCCeEEEEEECCHHHHHHHhCCCcEEEecCCCcCCHHHHh
Confidence 999999999999999975555655555553 44 5899999999999999999999999999999999999999999999
Q ss_pred hccC--CCC--C--CccccccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHH
Q 000657 738 DAKS--FHP--N--TERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQ 811 (1370)
Q Consensus 738 ~~~a--~~~--~--~~~~~~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r 811 (1370)
++++ +|+ | ....+.+||++++| ++|++|||++|++++|+|+||||++|+|+|+ +|+|+||+|||+|+.+|
T Consensus 294 ~~~a~~i~~~~Nv~~~~~~~~Gdv~~af--~~A~~vve~~y~~~~~~h~~mEp~~~vA~~~--~~~l~v~~stQ~p~~~r 369 (848)
T TIGR03311 294 AEGAPAIHPKGNILSEEHVVRGDAEEAL--ENSAYVVTNHYSTPFTEHAFLEPESALAVPE--GDGVIIYTSTQGVYDEQ 369 (848)
T ss_pred cCCCCeECCCCCCcceeeecCCCHHHHh--hcCCeEEEEEEEECCEeeeecCCceEEEEEe--CCeEEEEECCcCHHHHH
Confidence 8876 343 1 12346789999999 9999999999999999999999999999997 56799999999999999
Q ss_pred HHHHHHhCCCCCcEEEEecccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCC
Q 000657 812 KYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNE 891 (1370)
Q Consensus 812 ~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~d 891 (1370)
..+|++||||++||||+.+++|||||+|.+.. .+..||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+|
T Consensus 370 ~~vA~~Lglp~~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~d 447 (848)
T TIGR03311 370 RELASLLGLPKEKIRVINKFVGGGFGGKEDMS--VQHHAALLAWATKRPVKVTLTRKESILVHPKRHAMEMTFTTGCDEA 447 (848)
T ss_pred HHHHHHhCCChHHEEEEeCCCCCcCCcccccc--HHHHHHHHHHHhCCCEEEEechHHhhhccCCCCceEEEEEEEECCC
Confidence 99999999999999999999999999999853 4568999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHH
Q 000657 892 GKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVE 971 (1370)
Q Consensus 892 G~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~ 971 (1370)
|+|+|++++++.|+|+|.+++..++.++..++.++|+|||++++++.|+||++|.|+|||||.+|++|++|++||++|++
T Consensus 448 G~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~ 527 (848)
T TIGR03311 448 GNLTAMKADIIADTGAYASLGGPVLQRACTHAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFGVTQSNFAMECNLNLLAEK 527 (848)
T ss_pred CcEEEEEEEEEEccccCCCccHHHHHHHHHhcCCCccCceEEEEEEEEECCCCCCCCccCCChhHHHHHHHHHHHHHHHH
Confidence 99999999999999999988777788888889999999999999999999999999999999999999999999999999
Q ss_pred hCCCHHHHHHHhcCCCCCccccCcccc-CCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccc
Q 000657 972 VRKSPEEIREINFQGEGSILHYGQQLQ-HCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLK 1050 (1370)
Q Consensus 972 lg~DP~e~Rl~Nl~~~g~~~~~g~~~~-~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~ 1050 (1370)
|||||+|||++|++++|+.+++|+.++ +..+++||+++++. |++ ++++|+++.....|++..
T Consensus 528 lg~DP~E~R~rN~~~~gd~~~~g~~~~~~~~~~~~l~~~~~~--~~~-------------~~~~G~~~~~~~~g~~~~-- 590 (848)
T TIGR03311 528 VGLSPWEIRFKNAVEPGDTLPNGQVVSEGTAIKETLLAVKEV--YEK-------------SPCAGIACAFKNSGVGVG-- 590 (848)
T ss_pred hCcCHHHHHHHhCCCCCCcCCCCceeCCCchHHHHHHHHHHH--hhh-------------ccCCeEEEEEEEeccccC--
Confidence 999999999999999999999999997 55699999999874 431 135688776655555431
Q ss_pred cCCceeEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHH
Q 000657 1051 LMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLD 1130 (1370)
Q Consensus 1051 ~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~ 1130 (1370)
..+.+.+.+.++ ||+|+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|+++|+||++
T Consensus 591 ~~~~~~~~~~~~-DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~aSR~t~~~G~Av~~ 669 (848)
T TIGR03311 591 IPDTGRCNLAVE-DGKVHIRTSAACIGQGLGTVLTQIVCETTGLPPEVIVCELPDTALTPDSGTTTASRQSLFTGEATRR 669 (848)
T ss_pred CCCcceEEEEEc-CCEEEEEECCCCcCcCHHHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCchhhHHHHHHHHHHH
Confidence 123456777777 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhCCCCCHHHHHHHhhccc-----ccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCC
Q 000657 1131 ACEQIKARMEPIASKHNFNSFAELASACYVQR-----IDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTL 1205 (1370)
Q Consensus 1131 Ac~~L~~rl~~~a~~~~~~~~~~~~~~a~~~~-----~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~ 1205 (1370)
||++||+||++. .|.++....+... .++...+.| ..++..|+|+++++|| | +
T Consensus 670 Aa~~l~~~l~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~eV--d-~ 726 (848)
T TIGR03311 670 AAAKLKEALRGR-------TLAELEGEEFYGEYHSITDPLNSDKEN-------------PVSHVGYGYATQVVIL--D-D 726 (848)
T ss_pred HHHHHHHHHHhc-------CHHHcCCCEEeeccccccCcceeeccC-------------CCCccccceEEEEEEE--C-C
Confidence 999999999742 3444311111000 001111110 1122345566666655 6 8
Q ss_pred CCcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeE
Q 000657 1206 TGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFN 1285 (1370)
Q Consensus 1206 TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~ 1285 (1370)
|| +|+|+++++|||++|||.+++||||||++||||++|+|++.|| +|++++ +|++|++|++.|+|+ |+
T Consensus 727 tG--~v~r~~~v~D~G~vINP~~veGQieGG~~qGlG~AL~Ee~~~d--------~G~~~~-~~~dY~iPt~~D~P~-i~ 794 (848)
T TIGR03311 727 AG--KVEKVVAAYDVGRAINPLNLEGQIEGGIVMGLGYALTEDFPLR--------EGIPTA-KFGTLGLFRSTQVPE-IE 794 (848)
T ss_pred CC--eEEEEEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhcCcEEec--------CCeecC-ChhhccCCChhhCCC-eE
Confidence 99 5779999999999999999999999999999999999999996 499887 599999999999996 99
Q ss_pred EEEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000657 1286 VSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1348 (1370)
Q Consensus 1286 v~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~ 1348 (1370)
++++|+ ++|.+|||+||+||+++++ +++||+|||++|+ |+| ++++|+|||+||
T Consensus 795 v~~ve~-~~~~~p~GaKGvGE~~~~~---~~~AIanAV~~A~---G~r---~~~lP~~p~~v~ 847 (848)
T TIGR03311 795 THLIEK-NGTPLAYGAKGVGELATIP---TAPAVAGAYYRFD---GKF---RLSLPLENTPYT 847 (848)
T ss_pred EEEEeC-CCCCCCCCCccCCCCcccc---hHHHHHHHHHHhH---CcC---cccCCCCccccc
Confidence 999997 9999999999999999975 6789999999998 997 799999999986
No 8
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=100.00 E-value=3.1e-154 Score=1471.75 Aligned_cols=734 Identities=47% Similarity=0.752 Sum_probs=673.9
Q ss_pred cCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCCCCcc
Q 000657 607 VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVAD 686 (1370)
Q Consensus 607 iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~~~~d 686 (1370)
|||+++|+|+..||||+++|++|+..+|||||++++|||++||+|++||+|+|+++|||++|+|++|+|+.|.++....+
T Consensus 1 ~G~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~~iD~s~A~~~pGV~~V~t~~D~p~~~~~g~~~~~ 80 (758)
T TIGR02965 1 VGTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVVDVLTAADIPGENDISPIIHD 80 (758)
T ss_pred CCCCccCcchHhhCceeeEcccCCCCCCCCEEEEEEecCCCceEEeecchHHHhcCCCcEEEEEHHHCCCCCCCCCCCCC
Confidence 69999999999999999999999963389999999999999999999999999999999999999999977666666678
Q ss_pred ccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccCCCCCCccccccCCcccccccCCCcc
Q 000657 687 EELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDK 766 (1370)
Q Consensus 687 ~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~~~~~~~~~~~Gdv~~af~~~~a~~ 766 (1370)
+|+|++++|||+|||||+|+|+|+++|++|+++|+|+||+||+++|+++|+++++...+....+.+||++++| ++|++
T Consensus 81 ~~~la~~~Vry~Ge~va~VvA~~~~~A~~A~~~i~V~ye~lp~v~d~~~Al~~~a~~~~~~~~~~~Gd~~~af--~~a~~ 158 (758)
T TIGR02965 81 DPLLADGKVEFVGQPIFAVIATSRDAARRAARLAKIEYEELPAVLDIEEALAAGSRFVTPPLTLERGDAEAAL--AAAPH 158 (758)
T ss_pred ceeccCCEEEEcCCeEEEEEECCHHHHHHHhhccEEEEEcCCccCCHHHHhcCCCCcccCcccccCCCHHHHH--hhCCE
Confidence 9999999999999999999999999999999999999999999999999998876322123456889999999 99999
Q ss_pred EEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccchHH
Q 000657 767 IIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFI 846 (1370)
Q Consensus 767 vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~ 846 (1370)
+||++|++++|+|++|||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+...++
T Consensus 159 vve~~y~~~~~~h~~mEp~~~vA~~~-~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~~ 237 (758)
T TIGR02965 159 RLSGEMRIGGQEHFYLEGQIALAVPG-EDGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGGKETQANLF 237 (758)
T ss_pred EEEEEEEECCEeEEecCCceEEEEEc-CCCCEEEEECCCChHHHHHHHHHHhCCChHHEEEEeCCCccCccccccccchH
Confidence 99999999999999999999999997 46789999999999999999999999999999999999999999999864455
Q ss_pred HHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCC
Q 000657 847 AAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNV 926 (1370)
Q Consensus 847 ~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~ 926 (1370)
++.||++|+++||||||+|||+|+|+.+.+||++.+++|+|+|+||+|++++++++.|+|+|.+.+..++.++.....++
T Consensus 238 ~~~aa~~A~~~grPVk~~~sR~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~~ 317 (758)
T TIGR02965 238 ACLAAVAARKTGRPVKLRPDRDDDMMITGKRHDFLVDYDVGFDDEGRILGVDIDMAARCGFSADLSGPVTDRALFHADNA 317 (758)
T ss_pred HHHHHHHHHHHCCCEEEEechHHhhhhccCccceEEEEEEEECCCCCEEEEEEEEeecCcccCCcchHHHHHHHHhcCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999876666777777788999
Q ss_pred cccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCcc--ccCccccCCCHHH
Q 000657 927 YEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSIL--HYGQQLQHCTLFP 1004 (1370)
Q Consensus 927 Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~--~~g~~~~~~~l~~ 1004 (1370)
|+|||++++++.|+||++|+|+|||||.+|+.|++|++||++|++|||||+|||++|++++|+.+ ++|+.+++..+++
T Consensus 318 Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~Nl~~~g~~~~~~~g~~~~s~~~~~ 397 (758)
T TIGR02965 318 YFLPDVTITSHPLKTNTQSNTAFRGFGGPQGMVAIERIMDEVARALGKDPLEVRKRNFYGKDERNVTPYHQTVEDNIIHE 397 (758)
T ss_pred ccCCceEEEEEEEEcCCCCCccccCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHcCCCCCCCCcCCCceeccCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988776 6799999999999
Q ss_pred HHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCccCCcchHHHH
Q 000657 1005 LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKV 1084 (1370)
Q Consensus 1005 ~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~ 1084 (1370)
||+++++.++|+++++..++||..++|++||+++++..||.++.....+++++.|+|++||+|+|.+|.+|||||++|++
T Consensus 398 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~i~~dG~v~v~~g~~e~GQG~~T~l 477 (758)
T TIGR02965 398 IIEELEESSDYAARRAAIRAFNAASPVLKKGIALTPVKFGISFTVTHLNQAGALVHVYTDGSIHLNHGGTEMGQGLNTKV 477 (758)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCceeEEEEeeeeccccccccccCccceEEEEeCCCcEEEEECCCCCCCCHHHHH
Confidence 99999999999998877777777788888999999888887654222346789999999999999999999999999999
Q ss_pred HHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC------------------
Q 000657 1085 AQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH------------------ 1146 (1370)
Q Consensus 1085 ~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~------------------ 1146 (1370)
+||+||+||||+|+|+|..+||+.+|++++|+|||+|.+.|.||++||++||+||+++++++
T Consensus 478 aQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~~l~~~~~~l~~~~g~v~~~ 557 (758)
T TIGR02965 478 AQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEKWQVPAEDVRFAPNHVRVG 557 (758)
T ss_pred HHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999987764
Q ss_pred -CCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEEEecCcccC
Q 000657 1147 -NFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLN 1225 (1370)
Q Consensus 1147 -~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~iN 1225 (1370)
...+|.+++..++....+|.++++|..+...++..++.+.++.+|+||+|++|||||++||+++|+|+++++|||++||
T Consensus 558 ~~~~~~~~l~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iN 637 (758)
T TIGR02965 558 EQRVPFAELVQQAYFARVQLSSTGFYKTPKIHWDRAKGRGRPFYYFAYGAACSEVSVDTLTGEYKVLRADILHDVGRSLN 637 (758)
T ss_pred CCccCHHHHHHHHhhcCCCcEEEEEEcCCCccccccccCCCCcceeeeeEEEEEEEEecCCCcEEEEEEEEEEecCCcCC
Confidence 1268999998887656679999998766544444444555655789999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeec-CCCCCCCCCCCcC
Q 000657 1226 PAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKG-HPNVKAIHSSKAV 1304 (1370)
Q Consensus 1226 P~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~-~~~~~~p~gaKGv 1304 (1370)
|.+++|||+||++||||++|+|++.||+ +|+++|.||++|++|++.|||++|++.++|. .++|.+|||+||+
T Consensus 638 P~~~~GQi~Gg~~qGiG~aL~E~~~~d~-------~G~~l~~~~~dY~iPta~DiP~~~~~~~~e~~~~~~~~p~GaKGv 710 (758)
T TIGR02965 638 PAIDIGQVEGGFVQGMGWLTTEELVWDE-------KGRLRTHAPSTYKIPAASDRPKDFNVRLFEWSENREDTIHRSKAV 710 (758)
T ss_pred HHHhhhhhhhhhhhhhhHhhccceEECC-------CcCCcCCCCcCcCCCChhhCCCccEEEEecCCCCCCCCCcCCccc
Confidence 9999999999999999999999999998 8999999999999999999994499999983 2456899999999
Q ss_pred CCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000657 1305 GEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1353 (1370)
Q Consensus 1305 GE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~ 1353 (1370)
||++++++++|++||+|||++|+ |++.|+.+++|+|||+||++|++
T Consensus 711 GE~~~~~~aav~~AI~nAi~~a~---g~~~~~~~~lP~tpe~v~~al~~ 756 (758)
T TIGR02965 711 GEPPLMLGISVLFAISDAVASVA---DYRVCPRLDAPATPERVLMAVEA 756 (758)
T ss_pred CccchhhHHHHHHHHHHHHHHhh---ccCCCCCCCCCCCHHHHHHHHHh
Confidence 99999987789999999999998 88866779999999999999865
No 9
>COG4631 XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.4e-153 Score=1295.84 Aligned_cols=735 Identities=47% Similarity=0.733 Sum_probs=704.3
Q ss_pred CccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCCCC
Q 000657 605 TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVV 684 (1370)
Q Consensus 605 ~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~~~ 684 (1370)
..||.+.++-.+...|+|+|.|+|||+.|+|.||+++-.|+++||||+++|.+++++.|||+.|+|++|+||.|..++..
T Consensus 17 ~~v~~~~~HeSAhkHV~GtA~YiDD~pepag~LH~~~gls~~aHAri~~mDl~~v~a~PGVv~vlta~DvPGenDisp~~ 96 (781)
T COG4631 17 GGVGTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAPGVVDVLTAADVPGENDISPVK 96 (781)
T ss_pred CcccccccccchhhcccceeEEecCCCCcccchhhhccccccchheeeecchHHhhcCCCeEEEEEecCCCCCCCCCccc
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred ccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccCCCCCCccccccCCcccccccCCC
Q 000657 685 ADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQC 764 (1370)
Q Consensus 685 ~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~~~~~~~~~~~Gdv~~af~~~~a 764 (1370)
+|+|+|++++|.|+||||-+|+|+|.++|++|+++.+|+||+||+++|+.+|+..+.+.. ....+++||.+.+| +.|
T Consensus 97 hddpl~a~gkVef~GQ~vfaV~A~s~e~ARraA~~a~ieYe~lp~~~di~~a~a~~~~v~-~p~~l~rGD~~a~~--~~A 173 (781)
T COG4631 97 HDDPLLADGKVEFHGQPVFAVIAESREAARRAARLAKIEYEDLPPVTDIDEAIAAGRLVT-PPLTLKRGDAAAAL--AAA 173 (781)
T ss_pred CCCccccCceEEEccceEEEEeehhHHHHHHHHHhhhcccccCCccCCHHHHhhcccccC-Cchhhcccchhhhh--hhC
Confidence 999999999999999999999999999999999999999999999999999998886543 45678999999999 999
Q ss_pred ccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccch
Q 000657 765 DKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSA 844 (1370)
Q Consensus 765 ~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~ 844 (1370)
.+.++++++++.|+|||||.+.++|.|. |||.++||+|||.|..+|..+|++||+|.+.|.|...|+|||||||++...
T Consensus 174 p~r~~G~~~iGGQehFYLEgqia~a~p~-Ed~~v~v~~STQhPtE~Q~~vahvLGvpsn~VtV~~rRMGGGFGGKEtQ~~ 252 (781)
T COG4631 174 PHRLQGEMRIGGQEHFYLEGQIALAVPG-EDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGFGGKETQAN 252 (781)
T ss_pred chhheeeEEEcCeeeEEEeeeeeEeccC-CCCCEEEEecCCCcHHHHHHHHHHhCCCcceEEEEEEeecCCcCcccccch
Confidence 9999999999999999999999999997 788999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccC
Q 000657 845 FIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSD 924 (1370)
Q Consensus 845 ~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~ 924 (1370)
.+++.||++|+|++||||+..+|.|||++++|||+++..|++|||.||+|+++++.+..++|++.++|.+++++++.|++
T Consensus 253 ~fAa~aA~aA~k~~r~vk~RpdRdeDm~~TGKRHdF~v~y~vGfDdeGri~~v~~~~aarcGfS~DLSgpV~dRAlfH~D 332 (781)
T COG4631 253 QFAALAALAAKKTGRPVKIRPDRDEDMTATGKRHDFHVDYEVGFDDEGRILGVDATLAARCGFSADLSGPVTDRALFHAD 332 (781)
T ss_pred HHHHHHHHHHHHhCCceeecCCcchhhhhccCcCceEEEeeeccCCCCcEEEeeeehhhccCcccccCccchhhheeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCC--ccccCccccCCCH
Q 000657 925 NVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGS--ILHYGQQLQHCTL 1002 (1370)
Q Consensus 925 ~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~--~~~~g~~~~~~~l 1002 (1370)
+.|.+|++.+.++..+||+.++++|||||.||+++++|++||++|..||+||+|+|++|++.++. .|||+|.+++..+
T Consensus 333 NaYf~p~v~~~s~~~kTntvSnTAfRGFGGPQGm~~~Eriid~vA~alGkdpleiRk~NfYg~~~~n~TpYhQ~Vednii 412 (781)
T COG4631 333 NAYFYPHVHILSRPLKTNTVSNTAFRGFGGPQGMLGIERIIDEVAYALGKDPLEIRKLNFYGKDGRNVTPYHQTVEDNII 412 (781)
T ss_pred cceeccceeeecceeeccccccccccccCCcchhhHHHHHHHHHHHHhCCCHHHHHhhhccCCCCCccCccccchHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999998766 6899999999999
Q ss_pred HHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCccCCcchHH
Q 000657 1003 FPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHT 1082 (1370)
Q Consensus 1003 ~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T 1082 (1370)
.++|+++...++|..|++++..||+..+..||||++.|.+||++|+....||++|+|+||.||||.+.||++|||||++|
T Consensus 413 ~ri~~ELeaSsdyaaRr~~i~aFNa~spv~krGlAlTPVKFGISFt~t~~NQAGALVHvY~DGSi~lNHGGTEMGQGL~t 492 (781)
T COG4631 413 ARIVDELEASSDYAARREAIRAFNAASPVIKRGLALTPVKFGISFTATHYNQAGALVHVYTDGSIHLNHGGTEMGQGLYT 492 (781)
T ss_pred HHHHHHHHhcchHHHHHHHHHHhhccChhhhccccccceeeeEEEeeeeeccCceEEEEeccCeEEEcCCCcccccchhH
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC----------------
Q 000657 1083 KVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH---------------- 1146 (1370)
Q Consensus 1083 ~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~---------------- 1146 (1370)
+++||+|++|+|++++|+|..++|+++||++.|.+|.+++++|+|+++||++||+||..+++.-
T Consensus 493 KvaQVvA~~fqvd~~rVkitaT~T~KVpNTSaTAASSGsDLNGmAa~dAa~qIk~RLv~fAA~~~~V~~~~v~F~~n~vr 572 (781)
T COG4631 493 KVAQVVAEEFQVDIDRVKITATTTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEHWGVPEEDVAFLPNRVR 572 (781)
T ss_pred HHHHHHHHHhCcccceEEEeccccCCCCCCccccccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCCHHHeEecCCeeE
Confidence 9999999999999999999999999999999999999999999999999999999999998863
Q ss_pred ---CCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEEEecCcc
Q 000657 1147 ---NFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYS 1223 (1370)
Q Consensus 1147 ---~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~ 1223 (1370)
..+.|+++++.+|..++.|++.|+|++|++.||...+.|.||.||+|||.++||+||++||+.+++|.++.||+|++
T Consensus 573 ig~~~~~F~~lv~~AY~arvqLsaaGFY~TPkihwdra~~~G~PFyYFaYGAacSEV~vDtlTGey~~~R~DiLHDvG~S 652 (781)
T COG4631 573 IGGQELAFADLVKQAYFARVQLSAAGFYKTPKIHWDRAAGRGRPFYYFAYGAACSEVSVDTLTGEYKVERTDILHDVGRS 652 (781)
T ss_pred EcceecCHHHHHHHHhheeeeeeccccccCCccccchhhcCCCceEEEeecceeeeEEEecccceEEEEeehhhhhhhhh
Confidence 13699999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred cCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCCC-CCCCCCCC
Q 000657 1224 LNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPN-VKAIHSSK 1302 (1370)
Q Consensus 1224 iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~~-~~~p~gaK 1302 (1370)
|||.++.|||||||+||+||.++||+.||+ .|+|.|..+++||||.+.|.|.+|+|.+.+...+ ..+.++||
T Consensus 653 LNpaiDlGQiEGgFvQGmGWLTtEeL~wd~-------kGRlrThapSTYKiP~~sdrP~~f~V~L~~~~~n~e~ti~rSK 725 (781)
T COG4631 653 LNPAIDLGQIEGGFVQGMGWLTTEELWWDE-------KGRLRTHAPSTYKIPLASDRPKIFNVRLAEWSENAEPTIHRSK 725 (781)
T ss_pred cccccccccccchhcccccccchhhheecc-------CCCeeecCCccccCcccccCchheeeehhcccccccccccccc
Confidence 999999999999999999999999999998 7999999999999999999999999999986333 35789999
Q ss_pred cCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000657 1303 AVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1353 (1370)
Q Consensus 1303 GvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~ 1353 (1370)
.+||||++++.||..||++|++.- .+.++ ....+.|+|||+|++++.+
T Consensus 726 AVGEPPlmL~iSV~~Al~~AvAsv-aD~r~--~p~ldaPATpErVlmave~ 773 (781)
T COG4631 726 AVGEPPLMLGISVLEALSDAVASV-ADYRV--CPRLDAPATPERVLMAVER 773 (781)
T ss_pred ccCCCCcchhHHHHHHHHHHHHHh-cccCc--CCCCCCCCCHHHHHHHHHH
Confidence 999999999989999999999765 34343 3468999999999999854
No 10
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=6.8e-147 Score=1400.16 Aligned_cols=709 Identities=25% Similarity=0.331 Sum_probs=635.3
Q ss_pred ccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCCCCcccccc
Q 000657 611 EVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELF 690 (1370)
Q Consensus 611 ~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~~~~d~~~l 690 (1370)
++|+|+..||||+++|++|+.+ |||||++++|||++||+|++||+++|+++|||++|+|++|+|..........|+|+|
T Consensus 1 ~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~vvrSp~ahA~I~siD~s~A~a~pGV~~V~t~~D~p~~~g~~~~~~d~~~l 79 (746)
T TIGR03194 1 VPLVDGVEKVTGKAKYTADLAA-PGALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCPVPYGVLPIAENEYPL 79 (746)
T ss_pred CcCcchHhhCccccccccCCCC-CCCEEEEEEecCCccEEEeeccHHHHHhCCCcEEEEeHHHCCcccCCCCCCCCCccC
Confidence 4799999999999999999998 799999999999999999999999999999999999999998521111223589999
Q ss_pred ccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccCC--CCCC------ccccccCCcccccccC
Q 000657 691 ASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPNT------ERCFRKGDVDICFQSG 762 (1370)
Q Consensus 691 a~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~--~~~~------~~~~~~Gdv~~af~~~ 762 (1370)
++++|||+|||||+|+|+|+++|++|+++|+|+||+||+++|+++|+++++. |++. ...+.+||++++| +
T Consensus 80 a~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Veye~lp~v~d~~~Al~~~a~~ih~~~~~Nv~~~~~~~~Gd~~~a~--~ 157 (746)
T TIGR03194 80 ARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEYEELPAYMDPKAAMKAGAILLHDNKPGNIEREVHNEFGDVAAAF--A 157 (746)
T ss_pred CCCeEEEcCCeEEEEEECCHHHHHHHhcCCcEEEecCCCcCCHHHHhcCCCCccCCCCCCcEEEEEeeccCCHhHHh--c
Confidence 9999999999999999999999999999999999999999999999988763 4311 1346789999999 9
Q ss_pred CCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCcc
Q 000657 763 QCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETR 842 (1370)
Q Consensus 763 ~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~ 842 (1370)
+|+++||++|++++|+|++|||++|+|+|++++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+.
T Consensus 158 ~a~~vve~~~~~~~~~h~~mEp~~~~A~~~~~~~~l~v~~stQ~p~~~r~~va~~Lglp~~kVrV~~~~vGGgFG~K~~~ 237 (746)
T TIGR03194 158 EADLIREKTFTCAEVNHAHMEPNATLAEYDPVRGMLTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFGARVEP 237 (746)
T ss_pred cCCEEEEEEEEECCEeEEccCCCeEEEEEeCCCCeEEEEECCCchHHHHHHHHHHhCCCHHHeEEEcCCCcCcccccccc
Confidence 99999999999999999999999999999844578999999999999999999999999999999999999999999875
Q ss_pred chHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhc
Q 000657 843 SAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFH 922 (1370)
Q Consensus 843 ~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~ 922 (1370)
.++++.||++|+++||||||+|||+|+|..+.+||++.+++|+|+|+||+|+|++++++.|+|+|.+++..++......
T Consensus 238 -~~~~~~aal~a~~~grPVk~~~~ReE~~~~~~~R~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~ 316 (746)
T TIGR03194 238 -LNFEIIAGLLARKAKGTVRLLQTREETFITHRGRPQTYVKMKIGLKKDGKITACAAEVVQRGGAYAGYGIVTILYAGAL 316 (746)
T ss_pred -chHHHHHHHHHHHhCCCEEEecchhhhhhcCCCCCceEEEEEEEECCCCeEEEEEEEEeecccccCCcchHHHHHHHHh
Confidence 3467899999999999999999999999999999999999999999999999999999999999998887777777778
Q ss_pred cCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCccccCccccCCCH
Q 000657 923 SDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTL 1002 (1370)
Q Consensus 923 ~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~~g~~~~~~~l 1002 (1370)
+.++|+|||++++++.|+||++|+|+|||||.+|+.||+|++||++|++|||||+|||+||+++.|+.+++|+.++++++
T Consensus 317 ~~g~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~lA~~lg~DPve~R~~N~~~~~~~~~~g~~~~s~~~ 396 (746)
T TIGR03194 317 LHGLYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRAAFESLLDEMAAELGIDPFAIRRRNLLQAPTVTMNDLRVMSYGL 396 (746)
T ss_pred cCCCcccceEEEEEEEEEcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCcCCCCCCCCCceecCCCH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeecccccc----ccCCceeEEEEEecCCcEEEEEcCccCCc
Q 000657 1003 FPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTL----KLMNQAGALVHVYTDGTVLVTHGGVEMGQ 1078 (1370)
Q Consensus 1003 ~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~----~~~~~~~a~V~l~~DGsV~V~~g~~e~Gq 1078 (1370)
++||++++++++|++|++.. +++||++++...++.+... ...+.+++.|++++||+|+|.+|++||||
T Consensus 397 ~~~l~~~~e~~~w~~~~~~~--------~~~rGiG~a~~~~~~~~~~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~Gq 468 (746)
T TIGR03194 397 PECLEKVEQASGWEERKGRL--------PKGRGLGIACSHFVSGSAKPIHFTGEPHATVALKLDFDGGITLLTGAADIGQ 468 (746)
T ss_pred HHHHHHHHHhcCchhhhhhc--------cccEEEEEEEEEEeccCCcccccCCCCCceEEEEEcCCccEEEEEcCCCCCC
Confidence 99999999999998765421 1234555554444332211 11346889999999999999999999999
Q ss_pred chHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC------------
Q 000657 1079 GLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH------------ 1146 (1370)
Q Consensus 1079 G~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~------------ 1146 (1370)
|++|+++|||||.||+|+|+|+|..+||+.+|++++|+|||+|++.|.||++||++||+||+++++++
T Consensus 469 G~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~ 548 (746)
T TIGR03194 469 GSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNAAIDAAEELKGVLVAAAAKKLDAREEDIECAG 548 (746)
T ss_pred CHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999997753
Q ss_pred ----------CCCCHHHHHHHhhcccccceEEEEeecCCccccccC--CCCC-CcccccEEEEEEEEEeeCCCCcEEEEE
Q 000657 1147 ----------NFNSFAELASACYVQRIDLSAHGFYITPEIDFDWIT--GKGN-PFRYFTYGAAFAEVEIDTLTGDFHTRM 1213 (1370)
Q Consensus 1147 ----------~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~--~~~~-~~~~~~~ga~~aeVeVD~~TG~v~V~r 1213 (1370)
...+|.+++..++.....+..+++|..+. .+.+.. ..+. ...+|+|+|+++|||||++||+++|+|
T Consensus 549 g~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~aeVeVD~~TG~v~v~~ 627 (746)
T TIGR03194 549 EMFFVSGSADPGLSFQEVVKAALVDSGTITVKGTYTCPP-EFQGGKKRGGAVGSTMGFSYAAQVVEVSVDEETGKVTVHK 627 (746)
T ss_pred CEEEECCCCCCceeHHHHHHHhcccCCCceEEEEecCCC-ccccccccccccCcccccceeEEEEEEEEECCCCCEEEEE
Confidence 12579999866665455688888886332 111110 0010 123689999999999999999999999
Q ss_pred EEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCC
Q 000657 1214 ANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHP 1293 (1370)
Q Consensus 1214 ~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~ 1293 (1370)
+++++|||++|||.+++||||||++||||++|+|++.|| +|+++|.||++|++|++.|+|+ ++++++|+ +
T Consensus 628 ~~~~~D~G~viNP~~v~gQi~Gg~~~GiG~aL~E~~~~d--------~G~~~~~~l~~Y~ipt~~d~P~-i~v~~ve~-~ 697 (746)
T TIGR03194 628 VWVAVDCGKAINPLAVEGQVQGAVWMGMGQALSEETVYD--------NGRMKHASLLDYRVPTIVESPD-IEVIIVES-M 697 (746)
T ss_pred EEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHhcCceEec--------CCeECCCChhhccCCChhccCC-eEEEEEeC-C
Confidence 999999999999999999999999999999999999998 4999999999999999999995 99999997 8
Q ss_pred CCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHh
Q 000657 1294 NVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMAC 1351 (1370)
Q Consensus 1294 ~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~ 1351 (1370)
++.+|||+||+||+++++ +++||+|||++|+ |+| ++++|+|||+||++|
T Consensus 698 ~~~~p~Gakg~GE~~~~~---~~~AIanAI~~A~---G~r---~~~lP~tpe~v~~al 746 (746)
T TIGR03194 698 DPNGPFGAKEASEGALAG---FLPAIHNAVYDAV---GVR---ATDLPLTPDRVTEAL 746 (746)
T ss_pred CCCCCCCCCcCCCCcccc---hHHHHHHHHHHhh---CCC---cccCCCCHHHHHhhC
Confidence 999999999999999974 6899999999998 987 699999999999875
No 11
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=100.00 E-value=6.7e-147 Score=1406.45 Aligned_cols=709 Identities=27% Similarity=0.377 Sum_probs=642.0
Q ss_pred ccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCC--CCC-
Q 000657 606 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR--IGP- 682 (1370)
Q Consensus 606 ~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~--~g~- 682 (1370)
.|||+++|+|+..||||+++|++|+.+ |||||++++|||++||||++||+++|++||||++|+|++|+|+.|. .+.
T Consensus 2 ~vG~~~~r~d~~~kvtG~~~Y~~D~~~-~gmL~a~~~rSp~aharI~siD~~~A~~~pGV~~Vvt~~D~p~~~~~~~~~~ 80 (759)
T PRK09970 2 AIGKSIMRVDAIAKVTGRAKYTDDYVM-AGMLYAKYVRSPIAHGKVKSIDTEEARSLPGVEAVFTWEDVPDIPFPTAGHP 80 (759)
T ss_pred CCCCCCcCcchHHhCcCCccccccCCC-CCCEEEEEEcCCCceEEEeeeeHHHHHhCCCcEEEEeHHHcCCccccccccc
Confidence 489999999999999999999999998 8999999999999999999999999999999999999999986442 111
Q ss_pred -------CCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccC--CCCC-----Ccc
Q 000657 683 -------VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPN-----TER 748 (1370)
Q Consensus 683 -------~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a--~~~~-----~~~ 748 (1370)
...|+++|++++|||+|||||+|+|+|+++|++|+++|+|+||+||+++|+++|+++++ +|+. ...
T Consensus 81 ~~~~~~~~~~~~~~la~~~Vr~~G~~VAaVvA~~~~~A~~A~~~i~Veye~lp~v~~~~~Al~~~a~~ih~~~~ni~~~~ 160 (759)
T PRK09970 81 WSLDPNHRDIADRALLTRHVRHHGDAVAAVVARDELTAEKALKLIKVEYEELPVITDPEAALAEGAPPIHNGRGNLLKQS 160 (759)
T ss_pred cCCCCCCCCCCCccCcCCEEEEcCCeEEEEEeCCHHHHHHHhCCCcEeEEeCCccCCHHHHhCCCCCccCCCCCceeeee
Confidence 12378999999999999999999999999999999999999999999999999998776 3431 123
Q ss_pred ccccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEE
Q 000657 749 CFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCK 828 (1370)
Q Consensus 749 ~~~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~ 828 (1370)
.+.+||++++| ++|++|||++|++++|+|++|||++|+|+|+ ++|+|+||+|||+|+.+|..+|++||||++||||+
T Consensus 161 ~~~~Gd~~~a~--~~a~~vve~~y~~~~~~h~~mEp~~~iA~~~-~~g~l~v~~stQ~p~~~~~~ia~~Lglp~~~VrV~ 237 (759)
T PRK09970 161 TMSTGNVQQTI--KAADYQVQGHYETPIVQHCHMENVTSYAYME-DDGRITIVSSTQIPHIVRRVVGQALGIPWGKVRVI 237 (759)
T ss_pred eeccCChhHhh--ccCCEEEEEEEEECCEeEeccCCceEEEEEC-CCCCEEEEECCCcHHHHHHHHHHHhCCCHHHEEEE
Confidence 46789999999 9999999999999999999999999999997 46889999999999999999999999999999999
Q ss_pred ecccCCCCCCCCccchHHHHHHHHHHHcC-CCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCC
Q 000657 829 TKRIGGGFGGKETRSAFIAAAAAVPSFLL-NRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGN 907 (1370)
Q Consensus 829 ~~~vGGgFGgK~~~~~~~~~~aAlaA~~~-gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga 907 (1370)
++++|||||+|.+.. ....||++|+++ ||||||+|||+|+|..+.+||++.+++|+|+|+||+|+|++++++.|+|+
T Consensus 238 ~~~vGGgFG~K~~~~--~~~~aa~la~~~~grPVk~~~~R~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Ga 315 (759)
T PRK09970 238 KPYVGGGFGNKQDVL--EEPLAAFLTSKVGGRPVKVSLSREECFLATRTRHAFTIDIKMGVNRDGTLKGYSLDVLSNTGA 315 (759)
T ss_pred eCCCCCCcCcccccC--HHHHHHHHHHHhcCCCeEEeechhHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEeecccc
Confidence 999999999998753 245678888888 99999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCC
Q 000657 908 SLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGE 987 (1370)
Q Consensus 908 ~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~ 987 (1370)
|.+++..++..+...+.++|+|||++++++.|+||++|+|+|||||.+|++|++|++||++|++|||||+|||++|++++
T Consensus 316 y~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~~ 395 (759)
T PRK09970 316 YASHGHSIASAGGNKVAYLYPRCAYKYSSKTVYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEFRLRNAARE 395 (759)
T ss_pred CCCcchHHHHHHHhhcCCCccCceEEEEEEEEECCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCC
Confidence 99888778777777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccc-CccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCCc
Q 000657 988 GSILHY-GQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGT 1066 (1370)
Q Consensus 988 g~~~~~-g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGs 1066 (1370)
|+.+++ |+.+++..+++||++++++++|+++++..+. .+.|++||+++++..++.++.....+.+++.|+|++||+
T Consensus 396 g~~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v~i~~dGs 472 (759)
T PRK09970 396 GDANPLSGKRIYSAGLPECLEKGRKIFEWDKRRAECKN---QQGNLRRGVGVACFSYTSGTWPVGLEIAGARLLMNQDGT 472 (759)
T ss_pred CCcCCCCCeeecCCCHHHHHHHHHHhcCchhhhHhHhh---hcCCceEEEEEEEEEEeecCCCCCCCcceEEEEEccCce
Confidence 999885 8889999999999999999999987654331 123466777777766766553333457899999999999
Q ss_pred EEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecC-CCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q 000657 1067 VLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSET-STDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK 1145 (1370)
Q Consensus 1067 V~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~-dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~ 1145 (1370)
|+|.+|.+|||||+.|+++||+||+||+|+++|+|..+ ||+.+|++++|+|||++++.|.|+++||++||+||++.+++
T Consensus 473 v~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~lr~~l~~~aa~ 552 (759)
T PRK09970 473 VQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQSYVAGPAIRKAALELKEKILAHAAV 552 (759)
T ss_pred EEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988 99999999999999999999999999999999999988765
Q ss_pred C-------------------C---CCCHHHHHHHhhcc---cccceEEEEeecCCccccccCCCCCCcccccEEEEEEEE
Q 000657 1146 H-------------------N---FNSFAELASACYVQ---RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200 (1370)
Q Consensus 1146 ~-------------------~---~~~~~~~~~~a~~~---~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeV 1200 (1370)
+ + ..+|.+++..++.. ..++...+.|..+. .+|+|+|+++||
T Consensus 553 ~l~~~~~~l~~~~G~v~~~~~~~~~~~~~~la~~a~~~~~~~~~~~~~~~~~~~~-------------~~~~~~a~~aeV 619 (759)
T PRK09970 553 MLHQSAMNLDIIDGHIVVKRPGEPLMSLEELAMDAYYHPERGGQITAESSIKTTT-------------NPPAFGCTFVDV 619 (759)
T ss_pred HhCCChHHEEEECCEEEECCCCCccccHHHHHHHhhccccCCCceeEEEEecCCC-------------CCCceEEEEEEE
Confidence 3 0 26799998877653 23466666654321 257899999999
Q ss_pred EeeCCCCcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCC
Q 000657 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDV 1280 (1370)
Q Consensus 1201 eVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~Di 1280 (1370)
|||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||++ +|+++++||++|++|++.|+
T Consensus 620 eVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~qGiG~aL~E~~~~d~~------~G~~~~~~~~dY~ip~~~d~ 693 (759)
T PRK09970 620 EVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDEK------TGVVRNPNLLDYKLPTMMDL 693 (759)
T ss_pred EEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHHHHHHHHhcceeEEcCC------CCeECCCChhhccCCCcccC
Confidence 999999999999999999999999999999999999999999999999999972 39999999999999999999
Q ss_pred CCeeEEEEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000657 1281 PLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1353 (1370)
Q Consensus 1281 P~~~~v~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~ 1353 (1370)
|+ |+++++++ ++|.+|||+||+||++++ ++++||+|||++|+ |+| ++++|+|||+||+++.+
T Consensus 694 P~-i~v~~ve~-~~~~~p~GaKgvGE~~~~---~~~~AIanAi~~A~---G~r---~~~lP~tpe~v~~al~~ 755 (759)
T PRK09970 694 PQ-LESAFVEI-YEPQSAYGHKSLGEPPII---SPAPAIRNAVLMAT---GVA---INTLPMTPQRLFEEFKE 755 (759)
T ss_pred CC-eEEEEEec-CCCCCCCCCcccCCCccc---chHHHHHHHHHHhh---CCC---cCCCCCCHHHHHHHHHh
Confidence 95 99999997 899999999999999996 47899999999998 987 69999999999999865
No 12
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=100.00 E-value=1.3e-145 Score=1390.09 Aligned_cols=712 Identities=28% Similarity=0.372 Sum_probs=628.1
Q ss_pred ccCCccc-ccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCCCC
Q 000657 606 SVGSPEV-HLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVV 684 (1370)
Q Consensus 606 ~iG~~~~-r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~~~ 684 (1370)
.|||+++ |+|++.||||+++|++|+.+ |||||++++|||++||+|++||+++|+++|||++|+|++|+|+.+.+|...
T Consensus 2 ~iG~~~~~R~d~~~kvtG~a~Y~~Di~~-pgmL~a~~vrSp~aha~I~siD~s~A~a~pGV~~V~t~~D~p~~~~~g~~~ 80 (768)
T TIGR03196 2 GIGKPSRVRPDGPDKVTGEFKYMGDLRF-PGMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQAMVTAADVPGLARFGIII 80 (768)
T ss_pred cCCCcCCcCcchHhhCcccccccccCCC-CCcEEEEEEecCCCcEEEeeccHHHHHhCCCcEEEEehHHCCCCCCCCccC
Confidence 4899999 99999999999999999998 799999999999999999999999999999999999999999766566666
Q ss_pred ccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccC--CCC--C--CccccccCCcccc
Q 000657 685 ADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHP--N--TERCFRKGDVDIC 758 (1370)
Q Consensus 685 ~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a--~~~--~--~~~~~~~Gdv~~a 758 (1370)
.|+|+|++++|||+|||||+|||+|+++|++|+++|+|+||+||+++|+++|+++++ +|+ | ......+||++++
T Consensus 81 ~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Veye~lp~v~d~~~a~~~~a~~i~~~~ni~~~~~~~~Gd~~~a 160 (768)
T TIGR03196 81 ADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDYEELAPMDDPDKALQPDAEPLHEAGNILHEAEFRHGDPDEG 160 (768)
T ss_pred CCcccccCCEEEEcCCeEEEEEECCHHHHHHHhccCceEEEeCCCcCCHHHHhcCCCCeECCCCcCcceeeeccCCHhHH
Confidence 789999999999999999999999999999999999999999999999999998764 342 1 1234578999999
Q ss_pred cccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCC
Q 000657 759 FQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGG 838 (1370)
Q Consensus 759 f~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGg 838 (1370)
| ++|+++||++|++++|+|++|||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+
T Consensus 161 f--~~a~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~ 237 (768)
T TIGR03196 161 F--AAGDTVFEDQYELGMQDHAFLAPEAALAMPA-ADGGFDLRAATQHGHKDREQIAACFDIPEEKIRITLAGMGGAFGG 237 (768)
T ss_pred h--ccCCEEEEEEEEeCCeeeeecCCceEEEEEc-CCCCEEEEECCCchHHHHHHHHHHhCCCHHHEEEEeCCCCCccCC
Confidence 9 9999999999999999999999999999997 467899999999999999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHH
Q 000657 839 KETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLER 918 (1370)
Q Consensus 839 K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~ 918 (1370)
|.... .++.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++++++++.|+|+|.+++..+...
T Consensus 238 K~~~~--~~~~aa~~A~~~gRPVk~~~sReE~~~~~~~r~~~~~~~k~g~~~dG~i~a~~~~~~~d~Gay~~~~~~v~~~ 315 (768)
T TIGR03196 238 KDDLN--IQIHAALLALASGLPVKIAQDRKESFLGGIHRHPAKITFKHGADADGNLLAHDAKIVADGGAYASLGPAVLAF 315 (768)
T ss_pred ccccc--HHHHHHHHHHHhCCCEEEEechHHhhhcCCCCCCeEEEEEEEECCCCcEEEEEEEEEecccccCCccHHHHHH
Confidence 98753 4577899999999999999999999999999999999999999999999999999999999999888777777
Q ss_pred HhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCccccCcccc
Q 000657 919 AMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQ 998 (1370)
Q Consensus 919 ~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~~g~~~~ 998 (1370)
+...+.++|++||++++++.|+||++|+|+|||||.+|+.||+|++||++|++|||||+|||++|++++|+.+++|+++.
T Consensus 316 ~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~ 395 (768)
T TIGR03196 316 AVEHAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGGNQITFAHEAHLDRLADALGIDPLDLRRKNARKPGDLGPLEHRIA 395 (768)
T ss_pred HHHhcCCCcccceEEEEEEEEEcCCCCCCccCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCcccC
Confidence 77778999999999999999999999999999999999999999999999999999999999999999999889998886
Q ss_pred -CCCHHHHHHHHHHhcCCh-----hhhHhhhhcc-------cCCCcceeeeEEEeeeeccccccccCC--ceeEEEEEec
Q 000657 999 -HCTLFPLWNELKLSCDFL-----NARKEVDNFN-------LNNRWKKRGIAMVPTKFGISFTLKLMN--QAGALVHVYT 1063 (1370)
Q Consensus 999 -~~~l~~~l~~~~~~~~~~-----~r~~~~~~~~-------~~~~~~grGia~~~~~~g~~~~~~~~~--~~~a~V~l~~ 1063 (1370)
+..+++||++++++++|. ++......|+ .+++ ++||++++...++.++.....+ ++++.|+|++
T Consensus 396 ~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~rGiG~a~~~~~~~~~~~~~~~~~~~a~v~l~~ 474 (768)
T TIGR03196 396 APDGAAEVIEAIASRPLPKAPILKKANRAVTALPGGRPAAAECGR-LQRGTGAAIAMHGGGFGEGMDDAAVAGARLELAE 474 (768)
T ss_pred CcCCHHHHHHHHHhhccccchhhhhhhhhhhhhhhhhhhhhhcCC-eeEEEEEEEEEecccCCCCccccCCccEEEEEeC
Confidence 788999999999999998 3322211221 1233 3456666666555544321112 2478999999
Q ss_pred CCc--EEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHH
Q 000657 1064 DGT--VLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEP 1141 (1370)
Q Consensus 1064 DGs--V~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~ 1141 (1370)
||+ |+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|++.|+||++||++||+||++
T Consensus 475 dGsv~v~v~~g~~d~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~kl~~ 554 (768)
T TIGR03196 475 DGTVKIRAHFACAECGQGFLAAAEQIAMEELGCAAEDISIAIADTAKGPKAGSSSASRGTSMSGGAIQGACAAFAAQLKA 554 (768)
T ss_pred CCCeEEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCchhhhhHhHHHHHHHHHHHHHHHHHH
Confidence 996 889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhhhCCC------------------------------CCHHHHHHHhhcccccceEEEEe-ecCCccccccCCCCCCccc
Q 000657 1142 IASKHNF------------------------------NSFAELASACYVQRIDLSAHGFY-ITPEIDFDWITGKGNPFRY 1190 (1370)
Q Consensus 1142 ~a~~~~~------------------------------~~~~~~~~~a~~~~~~l~~~g~~-~~~~~~~~~~~~~~~~~~~ 1190 (1370)
+++++-. .+|.+++. ...+.+.+.| ..|...++...+.+.++.+
T Consensus 555 ~aa~~l~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (768)
T TIGR03196 555 RAAETAGLPAEVVEAPAENLIPGAAEIVGDKNEAALRVPLAEAAA-----DGPIAAETAFHDFPTSALDADVGQGDGHFA 629 (768)
T ss_pred HHHHHhCCChhhEEEeCCeeeecccceeeecCCCcceEEHHHHhc-----cccceeeeccccCCCcccccccccCCCccc
Confidence 8654200 23444431 1123343433 2222222333333444567
Q ss_pred ccEEEEEEEEEeeCCCCcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCC
Q 000657 1191 FTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPG 1270 (1370)
Q Consensus 1191 ~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~ 1270 (1370)
|+||||++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.|| +|+++|.||+
T Consensus 630 ~~~ga~~~eveVd~~tG~v~v~~~~~~~D~G~~iNp~~~~gQi~Gg~~~Gig~al~E~~~~~--------~G~~~~~~~~ 701 (768)
T TIGR03196 630 FAAAAAAAEVDVDLDLGDVKLIDCAHAIAAGPVLNPLALRGQIEGGAAMALGLALMEEAKMT--------DGRVAAENFD 701 (768)
T ss_pred ccceEEEEEEEEECCCCcEEEEEEEEEEECCCccCHHHHHHHHHHHHHHHHHHHHhCCeEec--------CCeECCCCcc
Confidence 89999999999999999999999999999999999999999999999999999999999995 5999999999
Q ss_pred CCCCCCCCCCCCeeEEEEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000657 1271 SYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1348 (1370)
Q Consensus 1271 ~Y~iP~~~DiP~~~~v~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~ 1348 (1370)
+|++|++.|+|+ +++.++++ +++.+|||+||+||+++++ +++||+|||++|+ |+| ++++|+|||+|+
T Consensus 702 ~Y~~p~~~d~P~-~~~~~~~~-~~~~~p~G~kG~GE~~~~~---~~~AianAi~~A~---G~r---~~~lP~tpe~v~ 768 (768)
T TIGR03196 702 DYLIPGIADVPD-LDFIAIED-LMKDAPYGPKGVGEAGTCA---ATPAIIAAIHDAV---GCD---INKLPIRPEDLL 768 (768)
T ss_pred cccCCChhhCCC-eEEEEEeC-CCCCCCCCCccCcCccccc---hHHHHHHHHHHHh---CcC---cccCCCChhhCC
Confidence 999999999996 89999987 8999999999999999975 6789999999998 987 689999999984
No 13
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=100.00 E-value=4.6e-145 Score=1389.52 Aligned_cols=703 Identities=25% Similarity=0.320 Sum_probs=615.8
Q ss_pred CccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCC--CCCCC-ccccccc
Q 000657 615 SSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR--IGPVV-ADEELFA 691 (1370)
Q Consensus 615 d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~--~g~~~-~d~~~la 691 (1370)
|+.++|||+++|++|+.+ |||||++++|||++||+|++||+|+|++||||++|+|++|+|+.+. .+... .++|+|+
T Consensus 1 e~~r~vtG~a~Y~~Di~~-pgmL~a~~vrSp~aha~I~~ID~s~A~~~pGV~~V~t~~D~p~~~~~~~~~~~~~~~~~la 79 (770)
T TIGR02416 1 EDIRFIQGKGNYVDDVKL-PGMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLKPLNLHWMPTLAGDVQAVLA 79 (770)
T ss_pred CCcccccccccccccCCC-CCCEEEEEEcCCCccEEEecccHHHHhhCCCcEEEEEHHHcCCccCCcCCCCCCCCcccCc
Confidence 567899999999999998 8999999999999999999999999999999999999999975442 12111 2378999
Q ss_pred cCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccC--CCCCC----------------cccc---
Q 000657 692 SEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPNT----------------ERCF--- 750 (1370)
Q Consensus 692 ~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a--~~~~~----------------~~~~--- 750 (1370)
+++|||+|||||+|||+|+++|++|+++|+|+||+||+++|++||+++++ +|+.. ....
T Consensus 80 ~~~Vry~Ge~Va~VvA~t~~~A~~A~~~v~V~ye~lp~v~d~~~A~~~~a~~ih~~~~~~~~~~~~~~n~~~~~~~~~~g 159 (770)
T TIGR02416 80 DEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVVIDPFKALEPDAPVLREDLKGKTTGAHGARKHHNHIFRWEIG 159 (770)
T ss_pred CCEEEEcCCcEEEEEECCHHHHHHHhccceeeeecCCccCCHHHHhcCCCceecCCCCCccccccccccccceeeEEecC
Confidence 99999999999999999999999999999999999999999999998765 34310 0112
Q ss_pred ccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEec
Q 000657 751 RKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTK 830 (1370)
Q Consensus 751 ~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~ 830 (1370)
..||++++| ++|++|||++|++++|+|++|||++|+|+|++++|+|+||+|||+|+.+|..||++||||++||||+++
T Consensus 160 d~gd~~~af--~~a~~vve~~~~~~~~~h~~mEp~~~iA~~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~ 237 (770)
T TIGR02416 160 DKAATDAVF--AKAEVVVKQMMTYPRVHPSPLETCGCVASMDPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIRVISP 237 (770)
T ss_pred CccchhHHh--ccCCEEEEEEEEeCceeeEcCCCCeEEEEEeCCCCeEEEEECCCcHHHHHHHHHHHhCCCHHHEEEEcC
Confidence 345679999 999999999999999999999999999999843588999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCC
Q 000657 831 RIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLD 910 (1370)
Q Consensus 831 ~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~ 910 (1370)
++|||||+|..... ..+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++++++++.|+|+|.+
T Consensus 238 ~vGGgFG~K~~~~~-~~~~aa~~A~~~gRPVk~~~sR~E~~~~~~~r~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~ 316 (770)
T TIGR02416 238 DIGGGFGNKVGIYP-GYVCAIVASIVLGVPVKWVEDRMENLSTTSFARDYHMTGELAATKDGKILAMRCNVLADHGAFDA 316 (770)
T ss_pred CCCCCccccccccc-HHHHHHHHHHHhCCCEEEecchHHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEEeeccccCC
Confidence 99999999987533 33458899999999999999999999999999999999999999999999999999999999987
Q ss_pred chHHHHHHHhh--ccCCCcccCeEEEEEEEEeCCCCCCC-ccC-CCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 000657 911 LSLAVLERAMF--HSDNVYEIPNVRIMGNVCFTNFPSNT-AFR-GFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQG 986 (1370)
Q Consensus 911 ~~~~v~~~~~~--~~~~~Y~ipn~r~~~~~v~TN~~p~g-a~R-g~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~ 986 (1370)
++..++..... .+.++|+|||++++++.|+||++|.+ +|| |||.+|+.|++|++||++|++|||||+|||++|+++
T Consensus 317 ~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~gta~Rgg~G~pq~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~ 396 (770)
T TIGR02416 317 CADPSKWPAGFFNICTGSYDIPVAHCAVDGVYTNKAPGGVAYRCSFRVTEAVYAIERAVDTLAQRLEMDSADLRIKNFIQ 396 (770)
T ss_pred CccchhhhhhhhhhcCCccccceEEEEEEEEECCCCCCCCccccCCccHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCC
Confidence 65544433222 46899999999999999999999998 999 899999999999999999999999999999999998
Q ss_pred CCC---ccccCccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCC---cceeeeEEEeeeeccccccc-----cCCce
Q 000657 987 EGS---ILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNR---WKKRGIAMVPTKFGISFTLK-----LMNQA 1055 (1370)
Q Consensus 987 ~g~---~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~---~~grGia~~~~~~g~~~~~~-----~~~~~ 1055 (1370)
+++ .+++|+.+++..+++||+++++.++|++++...+.++..++ ++|+|+++.....+.+.... ....+
T Consensus 397 ~~~~p~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~G~a~~~~~~~~~~~~~~~~~~~~~~~ 476 (770)
T TIGR02416 397 PEQFPYTAPLGWEYDSGDYPLAMKKAMDTVDYHQLRAEQAAKRKRGETRELMGIGISFFTEIVGAGPSKNCDILGVGMFD 476 (770)
T ss_pred CccCccccCCCceecCCCHHHHHHHHHHhcCchhhHHHHHHHHhcCCCCceEEEEEEEEEEeccCCCcccccccccCccc
Confidence 865 34558899999999999999999999987655444444344 34555554322222221000 01146
Q ss_pred eEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHH
Q 000657 1056 GALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQI 1135 (1370)
Q Consensus 1056 ~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L 1135 (1370)
++.|+|++||+|+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|.++|.||++||++|
T Consensus 477 ~a~v~l~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l 556 (770)
T TIGR02416 477 SCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRSTPVAGAATALAARKI 556 (770)
T ss_pred eEEEEECCCceEEEEECCCCCCCCchHHHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhC----------------------CCCCHHHHHHHhhccc-----ccceEEEEeecCCccccccCCCCCCc
Q 000657 1136 KARMEPIASKH----------------------NFNSFAELASACYVQR-----IDLSAHGFYITPEIDFDWITGKGNPF 1188 (1370)
Q Consensus 1136 ~~rl~~~a~~~----------------------~~~~~~~~~~~a~~~~-----~~l~~~g~~~~~~~~~~~~~~~~~~~ 1188 (1370)
|+||+++++.+ ...+|.+++..+|... .+|.+.++|..+.
T Consensus 557 ~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~------------- 623 (770)
T TIGR02416 557 KAKAQMIAAHMLEVHEGDLEWDVDRFRVKGDPSKFKTMADIAWAAYNSPPPGLEPGLEAVNYYDPPN------------- 623 (770)
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCEEEECCCCCCcccHHHHHHHHhccCccCcCCceEEEEEeCCCC-------------
Confidence 99999987643 0158999998876431 2377777764321
Q ss_pred ccccEEEEEEEEEeeCCCCcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCC
Q 000657 1189 RYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCG 1268 (1370)
Q Consensus 1189 ~~~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~ 1268 (1370)
.+|+||+|++|||||++||+++|+|+++++|||++|||++++|||+||++||||++|+|++.||+ +|+++|++
T Consensus 624 ~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d~-------~G~~l~~~ 696 (770)
T TIGR02416 624 MTYPFGAYFCVVDIDVDTGVAKVRRFYALDDCGTRINPMIIEGQIHGGLTEGFAVAMGQEIRFDE-------QGNVLGAS 696 (770)
T ss_pred CCCCceeEEEEEEEECCCCeEEEEEEEEEEECCCccCHHHHHHHHHhhHHHHHHHHHhCcceECC-------CCCCCCCC
Confidence 25789999999999999999999999999999999999999999999999999999999999998 89999999
Q ss_pred CCCCCCCCCCCCCCeeEEEEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000657 1269 PGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1348 (1370)
Q Consensus 1269 ~~~Y~iP~~~DiP~~~~v~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~ 1348 (1370)
|++|++|++.|+|+ +++.++++ +++.+|||+||+||+++++ +++||+|||++|++++|++ ++++|+|||+||
T Consensus 697 ~~dY~iPta~DvP~-~~~~~~e~-~~~~~p~GaKGvGE~~~~~---~~aAianAI~dA~~~~Gv~---~~~lP~Tpe~v~ 768 (770)
T TIGR02416 697 LMDYFLPTAVETPH-WETDHTVT-PSPHHPIGAKGVGESPHVG---SVPCFSNAVVDAYAFLGVG---HIDMPHTAWRVW 768 (770)
T ss_pred hhhCcCCchhcCCC-eEEEEeec-CCCCCCCCccccCCccccc---HHHHHHHHHHHHHhhcCCC---cccCCCCHHHHh
Confidence 99999999999996 89999987 8999999999999999986 5689999999998778997 689999999998
Q ss_pred H
Q 000657 1349 M 1349 (1370)
Q Consensus 1349 ~ 1349 (1370)
+
T Consensus 769 ~ 769 (770)
T TIGR02416 769 K 769 (770)
T ss_pred h
Confidence 5
No 14
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=100.00 E-value=5.2e-116 Score=1113.14 Aligned_cols=699 Identities=29% Similarity=0.382 Sum_probs=615.0
Q ss_pred CccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCC-CCCCCCC
Q 000657 605 TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQG-DNRIGPV 683 (1370)
Q Consensus 605 ~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg-~n~~g~~ 683 (1370)
..+|+++.|.|+..||||+++|++|+.. +||+|+++||||++|++|++||.++|+++|||++|+|++|++. .+.....
T Consensus 4 ~~~gr~~~R~~~~~~vtG~~~y~~d~~~-~~~~~~~~vrs~~a~a~i~~id~~ea~~~~gv~av~ta~~l~~~~~~~~~~ 82 (731)
T COG1529 4 EIIGRSVLRADGLGKVTGKGRYADDIVA-PGMLYAAFVRSPYAHARIVSIDVSEAQGLPGVLAVITAEELPAWSPVRVEL 82 (731)
T ss_pred ccCCCCcccccchhheeeeeheehhhcC-CCCceEEEEeccCCceEEEEechHHHhhCCCeEEEechhhCcccccccccc
Confidence 4799999999999999999999999998 7999999999999999999999999999999999999999985 2221112
Q ss_pred CccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccC--CCCC--CccccccCCccccc
Q 000657 684 VADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPN--TERCFRKGDVDICF 759 (1370)
Q Consensus 684 ~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a--~~~~--~~~~~~~Gdv~~af 759 (1370)
.+..++|+.++|+|+||+||+|+|+|+++|++|+++|+|+||++|++.++++|+++++ +|+. .......||.+ +|
T Consensus 83 ~p~~~~l~~~~v~~~G~~vA~vva~d~~~A~~aa~~v~V~ye~l~~~v~~~~a~~~~~~~ih~~~n~~~~~~~g~~~-a~ 161 (731)
T COG1529 83 APADEVLARGKVRYTGEPVAAVVAEDEYQARAAAELVLVEYEALPPVVDPEEALAEDAPVIHDELNIARDATFGDDD-AF 161 (731)
T ss_pred CCcchhhccCceEEeCCeEEEEEeCCHHHHHHHHhhceeeeccCCCcCCHHHHhcCCCcccccccccccccccccch-hh
Confidence 2222378999999999999999999999999999999999999999999999999875 3441 24556778888 99
Q ss_pred ccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCC
Q 000657 760 QSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGK 839 (1370)
Q Consensus 760 ~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK 839 (1370)
++|+++++.+|.++++.|.+|||++++++|+ ++++|++|++||+|+.++.+++++|++|+++|||+++++|||||+|
T Consensus 162 --a~A~~~v~~~~~~~~~~~~~~E~~g~~a~~~-d~~~lt~~~~tQ~~~~~~~~l~~~l~~p~~~vrvi~~dvGggfG~K 238 (731)
T COG1529 162 --AAAAVVVEAPYKTPRKDPNPMEPHGVVAVPD-DGDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISPDVGGGFGSK 238 (731)
T ss_pred --hcCcEEeeeeeeccCcCccCcccccceeeEc-CCCeEEEEEccCCchHHHHHHHHHhCCCHHHeEEecCCCCcccCCc
Confidence 9999999999999999999999999999998 4569999999999999999999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHH
Q 000657 840 ETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERA 919 (1370)
Q Consensus 840 ~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~ 919 (1370)
... +.....++++|+++||||||+++|+|.|+.+.+||+...++++++++||+|++++++++.|.|+|. +..+....
T Consensus 239 ~~~-~~~~~~~~~aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~--~~~~~~~~ 315 (731)
T COG1529 239 GVV-YVEEILAALAAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYN--GPTVPAAA 315 (731)
T ss_pred ccc-eeHHHHHHHHHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCcc--ccchhHHH
Confidence 875 456667779999999999999999999999999999999999999999999999999999999996 44455666
Q ss_pred hhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCccccCccccC
Q 000657 920 MFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQH 999 (1370)
Q Consensus 920 ~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~~g~~~~~ 999 (1370)
...+.++|.|+|+++..+.++||++|+++|||+|.++++|++|++||+||++|||||+|+|++|+++.|... ++..+++
T Consensus 316 ~~~~~g~Y~i~~~~~~~~~v~tn~~p~~~~Rg~g~~~~~~a~E~~~d~lA~~Lgidp~eiR~~n~~~~g~~~-~~~~~~~ 394 (731)
T COG1529 316 AGLARGPYKIEAVYIEPYLVHTNMPPNGAYRGAGRPEGTFALERAVDELAEELGIDPVEIRLRNLIRGGPFG-LGRRYDS 394 (731)
T ss_pred HHhcCCceecccceeeeEEEEcCCCCCcccccCCCchhHHHHHHHHHHHHHHhCCCHHHHhhhhccccCCCC-CcccccC
Confidence 778899999999999999999999999999999999999999999999999999999999999999988776 7778889
Q ss_pred CCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCccCCcc
Q 000657 1000 CTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQG 1079 (1370)
Q Consensus 1000 ~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG 1079 (1370)
.++.+|+++++++++|.++..+..+.+..+.++|+|+++. .+.+.... .+.+.|+++.||+++|.+|.+++|||
T Consensus 395 ~~~~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~~--~~~~~~~~----~~~a~v~~~~~g~v~v~~g~~~~G~G 468 (731)
T COG1529 395 GDYLEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAMY--TEPSGAGP----GEGARVRLEADGTVTVRTGATDIGQG 468 (731)
T ss_pred ccHHHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEEE--EEeccCCC----CCcEEEEEcCCCcEEEEECCccCCCc
Confidence 9999999999999999876555544444444445555554 33333211 15699999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhCCC-----------
Q 000657 1080 LHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNF----------- 1148 (1370)
Q Consensus 1080 ~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~~~----------- 1148 (1370)
++|.++|++|+.||||.++|++..+||+..+.+++|+|||++.+.+.|+.+||++|++|+...++.+..
T Consensus 469 ~~t~~~q~~ae~lgip~~~V~v~~gDt~~~~~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~aa~~l~~~~~~~~~~~g 548 (731)
T COG1529 469 TDTVLAQIAAEELGIPPDDVEVVHGDTDVPVGGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAARMLGADAEDVVLEDG 548 (731)
T ss_pred HHHHHHHHHHHHhCCCHHHEEEEecCCCCCCCCCCCcCcccccchHHHHHHHHHHHHHHHHHHHHhhhCCChhHeeeccC
Confidence 999999999999999999999999999999999999999999999999999999999988776654311
Q ss_pred ------------CCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEE
Q 000657 1149 ------------NSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANV 1216 (1370)
Q Consensus 1149 ------------~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~ 1216 (1370)
.+|++.+.... ...+...++|. . ..+|+|+||++|||||++||++||+|+++
T Consensus 549 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~~~~~~-----------~---~~~~~~~A~~~EV~Vd~~tG~vrV~r~~~ 612 (731)
T COG1529 549 AFKVGGGDRRSAVSLKEVAGKGL--APGLAVAASFG-----------S---DNTYPYGAHIAEVEVDPETGEVRVLRVVA 612 (731)
T ss_pred eeeeccCCccceeeHHHhhhccc--cCccccccccc-----------c---cccccceeEEEEEEEECCCCcEEEEEEEE
Confidence 12333333220 01111111111 0 11688999999999999999999999999
Q ss_pred EEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCCCCC
Q 000657 1217 ILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVK 1296 (1370)
Q Consensus 1217 ~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~~~~ 1296 (1370)
++|||++|||++++|||+||++||||++|+|+.+||+ +|+++|.||.+|.||++.|+|+ ++|+++++ |++.
T Consensus 613 ~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d~-------~g~~~~~n~~dY~ip~~~d~P~-iev~~v~~-p~~~ 683 (731)
T COG1529 613 VDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDE-------DGQLLNSNLADYGIPRAADAPE-VEVEFVES-PSPF 683 (731)
T ss_pred EEecCCccCHHHHHHHHHhHHHHHHHHHhhccceECC-------CCCcCCCCcccccCCCcccCCc-eEEEEecC-CCCC
Confidence 9999999999999999999999999999999999998 8999999999999999999997 99999998 7778
Q ss_pred CCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhc
Q 000657 1297 AIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACL 1352 (1370)
Q Consensus 1297 ~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~ 1352 (1370)
+|+|+||+||+++++ +++||+|||++|+ |.| ++++|+|||+||.++.
T Consensus 684 ~p~g~kGvGE~g~~~---~~pAvaNAV~~At---Gkr---i~~lP~tp~~i~~al~ 730 (731)
T COG1529 684 GPLGAKGVGEGGIIG---IAPAIANAVFDAT---GKR---IRDLPITPERILAALR 730 (731)
T ss_pred CCCCCCCcCcCccCc---hhHHHHHHHHHHh---CCc---cccCCCCHHHHHHhhh
Confidence 899999999999975 6799999999998 887 6999999999999875
No 15
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.9e-114 Score=947.95 Aligned_cols=475 Identities=35% Similarity=0.578 Sum_probs=425.8
Q ss_pred cceEEEEEECCEEEEeccCCCCCcHHHHHhh-CCCCccccCCCCCCCCceEEEEccccccCCc-ccceeecccccchhcc
Q 000657 17 WTKEAILYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKK-CVHCAVNACLAPLYSL 94 (1370)
Q Consensus 17 ~~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~-~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~-~~~~~v~sCl~~~~~~ 94 (1370)
.++.|+|.+||+.+.+++++|..|||||||. .+|||||+||.||+||||||||.+.. +|. ++|++||+||..+.++
T Consensus 5 ~~~~irf~lN~~~~~l~~v~P~~TlLd~LR~d~~ltGtKEGCAEGDCGACTVlVgrl~--~g~~l~yeSVNACirfl~sL 82 (493)
T COG4630 5 RRNTIRFLLNGETRVLSDVPPTTTLLDYLRLDRRLTGTKEGCAEGDCGACTVLVGRLV--DGGSLRYESVNACIRFLGSL 82 (493)
T ss_pred ccceeEEEecCceEEeecCCcchHHHHHHHHhcccccccccccCCCcCceEEEEEeec--CCCceeeeehhHHHHHHhhc
Confidence 4689999999999999999999999999996 59999999999999999999999864 344 9999999999999999
Q ss_pred CCcEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHH
Q 000657 95 EGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 174 (1370)
Q Consensus 95 ~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a 174 (1370)
||++|+|||+|+.+++.||||||||+++|||||||||||||||+|+|..+++.| +.+.|+++|+|||||||||+||++|
T Consensus 83 ~G~hvvTvE~L~~~~g~LHpVQqamvd~hGSQCGfCTPGFVmSLyal~~~~~~P-~~a~i~kALqGNLCRCTGY~pI~~A 161 (493)
T COG4630 83 DGTHVVTVEHLRGQDGTLHPVQQAMVDFHGSQCGFCTPGFVMSLYALWMNSPTP-SRAAIEKALQGNLCRCTGYRPIIRA 161 (493)
T ss_pred CCceEEEehhhcCCCCCcCHHHHHHHhccCCccCCcCchHHHHHHHHHhcCCCC-chhHHHHHhhCCcccccCchHHHHH
Confidence 999999999999655569999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHhcccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCCCCCCChh
Q 000657 175 FRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPE 254 (1370)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 254 (1370)
.+.++..... +. |.|..-..-..-+.
T Consensus 162 A~~~~a~~~~--------a~----------------------------------------------fDPl~~~R~~~~~~ 187 (493)
T COG4630 162 AEAIAALGPA--------AG----------------------------------------------FDPLAARRTAITAR 187 (493)
T ss_pred HHHHhccCCc--------cc----------------------------------------------CChhhhhHHHHHHH
Confidence 9977643211 00 00000000000011
Q ss_pred hhcc-CCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCc
Q 000657 255 LLLR-KSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDG 333 (1370)
Q Consensus 255 l~~~-~~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~ 333 (1370)
|..- ....+.+.+ +...+|.|.+++++..++++||++++|||+||+++|.++.+.+...+|.+++|+||+.|++..++
T Consensus 188 L~A~~~~e~v~~~~-~~~r~~~P~~l~D~a~l~aa~P~AtivAGsTDvgLwVtk~mr~l~~vi~v~~l~eL~~i~~~~~~ 266 (493)
T COG4630 188 LRALRDTETVEVGS-GDDRFIVPATLADFADLLAAHPGATIVAGSTDVGLWVTKQMRDLNPVIFVGHLAELRRIEVSTGG 266 (493)
T ss_pred HhhccCCcEEEecC-CCceeEeeccHHHHHHHHhhCCCCEEEecCcchhhHHHHHHhhcCCeEEecchhhhheeeecCCc
Confidence 2111 123344555 56789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEe
Q 000657 334 LEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVD 413 (1370)
Q Consensus 334 l~IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s 413 (1370)
|+|||++||+|....|.. .||.|.+.+.+|+|.||||+|||||||.|+||++|.+|+|+||||+|++.+
T Consensus 267 l~iGAgvt~t~a~~~la~-----------~~P~l~~L~~r~gg~qvRN~gTlGGNIangSPIGDtPPaLIALgA~ltLr~ 335 (493)
T COG4630 267 LEIGAGVTYTQAYRALAG-----------RYPALGELWDRFGGEQVRNMGTLGGNIANGSPIGDTPPALIALGATLTLRS 335 (493)
T ss_pred EEEccCccHHHHHHHHHh-----------hCchHHHHHHHhcchhhhccccccccccCCCcCCCCCchhhhcCcEEEEEe
Confidence 999999999999987654 356788999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEE
Q 000657 414 CKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALL 493 (1370)
Q Consensus 414 ~~g~~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rI 493 (1370)
.++ .|++||+|||.+|+|++++|||+|.+|+||.+.+...|..||++||+++||+.|.+||++.++++ +|.++||
T Consensus 336 g~~-~RtlPLe~~Fi~Y~kqdr~pGEfVe~v~vP~~~~~~rfa~yKisKRrdeDISAv~~Af~l~Ldg~----~V~~arI 410 (493)
T COG4630 336 GDG-RRTLPLEDYFIAYGKQDRQPGEFVEAVRVPLPAPSERFAAYKISKRRDEDISAVCGAFALDLDGG----RVADARI 410 (493)
T ss_pred cCC-cccccHHHHHHHhhhhccCcchhhhheecCCCCcchhhhhhhhhhhccchHHHHHhHheeeecCC----eeeeeee
Confidence 999 99999999999999999999999999999999888999999999999999999999999999976 8999999
Q ss_pred EEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhc
Q 000657 494 VYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 566 (1370)
Q Consensus 494 a~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~ 566 (1370)
+||||+.+|+||.++|++|.||+|++++++.|+.++..+++|-.+ .|+|++||..++++|++|||++.....
T Consensus 411 a~GGmAaTPkRA~~~EaAL~Gk~wteatve~A~aAl~~D~tPltD-~RAsaeYR~l~a~nlL~RfflEt~~~~ 482 (493)
T COG4630 411 AFGGMAATPKRASEVEAALLGKPWTEATVEAAAAALAGDFTPLTD-MRASAEYRALTAKNLLRRFFLETQGEA 482 (493)
T ss_pred ecCccccCccchHHHHHHHcCCCccHHHHHHHHHHHhcCCCcccc-hhhhHHHHHHHHHHHHHHHhhhccCCc
Confidence 999999999999999999999999999999999999999985443 479999999999999999999988754
No 16
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and
Probab=100.00 E-value=6.9e-110 Score=1004.59 Aligned_cols=463 Identities=37% Similarity=0.634 Sum_probs=419.1
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEE
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHV 99 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 99 (1370)
|+|+|||+++++++++|+++|++|||++ ||||||.||++|+||||||+|.++|+.+ +++|++||||++|+++++|++|
T Consensus 1 i~~~~Ng~~~~~~~~~~~~~ll~~lR~~~~l~g~k~gC~~G~CGaCtv~~~~~~~~~-~~~~~~v~sCl~~~~~~~g~~i 79 (467)
T TIGR02963 1 IRFFLNGETVTLSDVDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVGELVDGG-KLRYRSVNACIQFLPSLDGKAV 79 (467)
T ss_pred CEEEECCEEEEeecCCCCCCHHHHHHHhcCCCCCCcccCCCCCCceEEEEEecCCCC-cccceEEehhhhhHHhcCCCEE
Confidence 5799999999995599999999999996 9999999999999999999997776445 8999999999999999999999
Q ss_pred EEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHHH
Q 000657 100 ITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFA 179 (1370)
Q Consensus 100 ~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~ 179 (1370)
+|||||++..+.+||||++|+++|++|||||||||||++++||++||.| +++||+++|+|||||||||++|++|++.++
T Consensus 80 ~TvEgl~~~~~~l~~~q~a~~~~~~~QCG~CtpG~vm~~~~ll~~~~~~-~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~ 158 (467)
T TIGR02963 80 VTVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKNSPAP-SRADIEDALQGNLCRCTGYRPILDAAEAAF 158 (467)
T ss_pred EecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHhcCCCC-CHHHHHHHhcCCcccCCCCHHHHHHHHHHH
Confidence 9999998435689999999999999999999999999999999999999 999999999999999999999999995443
Q ss_pred hcccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCC-CCCCChhhhcc
Q 000657 180 KTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEK-ELIFPPELLLR 258 (1370)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~l~~~ 258 (1370)
. . .| +++|++. +++| ++|...
T Consensus 159 ~-~--------------------------~~------------------------------~~~~~~~~~~~~-~~l~~~ 180 (467)
T TIGR02963 159 D-Y--------------------------PC------------------------------SDPLDADRAPII-ERLRAL 180 (467)
T ss_pred h-C--------------------------CC------------------------------CCcCCcchhhhh-hHHHhc
Confidence 2 1 01 1123333 4556 334422
Q ss_pred -CCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEc
Q 000657 259 -KSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 337 (1370)
Q Consensus 259 -~~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IG 337 (1370)
...++.+.+ ++.+||+|+|++||+++|+++|++++||||||++++++++...++++|||++|+||+.|+.++++|+||
T Consensus 181 ~~~~~~~~~~-~~~~~~~P~sl~Ea~~ll~~~~~a~lvAGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IG 259 (467)
T TIGR02963 181 RAGETVELNF-GGERFIAPTTLDDLAALKAAHPDARIVAGSTDVGLWVTKQMRDLPDVIYVGQVAELKRIEETDDGIEIG 259 (467)
T ss_pred CCCcceeecC-CCceEECCCCHHHHHHHHhhCCCCEEEecCcchHHHHhcCCCCCCeEEECCCChhhccEEEcCCEEEEe
Confidence 234455554 568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCC
Q 000657 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGN 417 (1370)
Q Consensus 338 A~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~ 417 (1370)
|+||++|+.+.+++ .+|.|.+++++|||+||||+|||||||++++|+||++|+|+||||+|+|.+.+|
T Consensus 260 A~vT~~el~~~l~~-----------~~p~L~~a~~~ias~qIRN~aTiGGNI~~asP~sD~~p~LlALdA~v~l~~~~G- 327 (467)
T TIGR02963 260 AAVTLTDAYAALAK-----------RYPELGELLRRFASLQIRNAGTLGGNIANGSPIGDSPPALIALGARLTLRKGEG- 327 (467)
T ss_pred cCCcHHHHHHHHHH-----------HhHHHHHHHHHhCCHHHcCceecccccccCCCchHHHHHHHHcCCEEEEEcCCC-
Confidence 99999999876543 466799999999999999999999999999999999999999999999999999
Q ss_pred eEEEehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEcc
Q 000657 418 IRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGG 497 (1370)
Q Consensus 418 ~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Gg 497 (1370)
+|+||++|||.||+++.|+++|||++|+||.+..+.++.+||+++|+++|||+||+||++++++ + +|+++||+|||
T Consensus 328 ~R~vpl~dF~~g~~kt~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~~~~-~---~i~~~ria~Gg 403 (467)
T TIGR02963 328 RRTLPLEDFFIDYGKTDRQPGEFVEALHVPRPTPGERFRAYKISKRFDDDISAVCAAFNLELDG-G---VVAEIRIAFGG 403 (467)
T ss_pred cEEEeHHHhhcccccccCCCCceEEEEEecCCCCCCceEEEEecccccccceeeEEEEEEEEcC-C---eEeEEEEEEec
Confidence 9999999999999999999999999999998766778899999999999999999999999974 4 89999999999
Q ss_pred CCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHH
Q 000657 498 VAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLW 561 (1370)
Q Consensus 498 va~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~ 561 (1370)
|+|+|+|++++|++|.||.|+++++++|.+++.+++.+.++ .++|++||++|+.+|++|||++
T Consensus 404 va~~p~r~~~~E~~L~G~~~~~~~l~~a~~~l~~~~~p~~d-~r~sa~YR~~la~~l~~r~~~~ 466 (467)
T TIGR02963 404 MAATPKRAAATEAALLGKPWNEATVEAAMAALAGDFTPLSD-MRASAEYRLLTAKNLLRRFFLE 466 (467)
T ss_pred CCCCceehHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCC-CCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999964443 4699999999999999999986
No 17
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=100.00 E-value=3.9e-105 Score=995.92 Aligned_cols=524 Identities=35% Similarity=0.499 Sum_probs=435.5
Q ss_pred ccccccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEE
Q 000657 747 ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVV 826 (1370)
Q Consensus 747 ~~~~~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVr 826 (1370)
.....+||++++| ++|+++||++|++|+++|++|||++|+|+|+ ++|+|+||++||+|+.+|..||++||||++|||
T Consensus 15 ~~~~~~GDve~af--~~a~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~g~l~v~~~tQ~p~~~r~~va~~lglp~~~V~ 91 (547)
T PF02738_consen 15 ERHIERGDVEAAF--AEADHVVEAEYRTPRQAHAPMEPHGAVAWWD-EDGRLTVWSSTQWPFHVRRAVAEALGLPPEKVR 91 (547)
T ss_dssp EEEEEESSHHHHH--HHTSEEEEEEEEE-BB----SS-SEEEEEEE-TTTEEEEEES-SSHHHHHHHHHHHHTS-GGGEE
T ss_pred ccccccCCHHHHH--hhCCEEEEEEEEECCccccCCCCCeEEEEEc-cCCCEEEEECCcCHhHHHHHHhhhhcCChhHEE
Confidence 4567999999999 9999999999999999999999999999998 689999999999999999999999999999999
Q ss_pred EEecccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCC
Q 000657 827 CKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAG 906 (1370)
Q Consensus 827 V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~G 906 (1370)
|+.+++|||||.|. ....++++||++|+++||||||+|||+|+|+.+.+||++.+++|+|+|+||+|+|++++++.|+|
T Consensus 92 V~~~~~GGgFG~~~-~~~~~~~~aa~~a~~~grPVk~~~tR~e~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~G 170 (547)
T PF02738_consen 92 VISPYVGGGFGKKK-QDSPIAVLAALAAKKTGRPVKLVWTREEDFRAGPKRPPTRIRVRAGADKDGKITALDHDIYADGG 170 (547)
T ss_dssp EEESB-S--TTTTS-STHHHHHHHHHHHHHHSSEEEEE--HHHHHHHS-BB-EEEEEEEEEE-TTS-EEEEEEEEEEEEE
T ss_pred EeeeecCCCCCCcc-ccchHHHHHHHHHhccCceEEEEechHHhcCCCCCccHHHhhhhheECCCCCEEEeeeeeeccCC
Confidence 99999999999333 23668899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 000657 907 NSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQG 986 (1370)
Q Consensus 907 a~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~ 986 (1370)
+|.+++..++...+....++|+|||++++++.|+||++|.++|||||.+|+.||+|++||++|++|||||+|||++|+.+
T Consensus 171 a~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~g~~Rg~G~~q~~fa~E~~~DelA~~lg~DP~e~R~~N~~~ 250 (547)
T PF02738_consen 171 AYASFSPAVAPRAGAGADGPYRIPNVRIDARAVYTNTPPAGAFRGFGAPQAAFALESFMDELAEKLGMDPLEFRLKNLID 250 (547)
T ss_dssp SS-TTHHHHHHHHHHTTTTTB--SEEEEEEEEEE-SSSSBE-STTTTHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHB-G
T ss_pred ccccccccchhhhhcccCCCcccccEEEEEEeccCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHhCcChHHHHHhcccc
Confidence 99999888888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCccccCCCHHH-HHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCC
Q 000657 987 EGSILHYGQQLQHCTLFP-LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDG 1065 (1370)
Q Consensus 987 ~g~~~~~g~~~~~~~l~~-~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DG 1065 (1370)
+++.+++|..++++.+.+ ||+++++.++|.++.++.+.++..+.|++||+++++..++.++.....+.+++.|+|++||
T Consensus 251 ~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gig~~~~~~~~~~~~~~~~~~~a~v~l~~DG 330 (547)
T PF02738_consen 251 PGDRTPTGQPYDSGDYPEDCLEKAAEHSGWRRRQKEVREFGSGNGWRGRGIGLGCAMYGSGTGGGSGDQSSARVRLNPDG 330 (547)
T ss_dssp TTEB-TTS-BETS--HHHHHHHHHHHHHCHHHHHHHHHHCCHEESSEEEEEEEEEEEEEESTTSGGGSEEEEEEEE-TTS
T ss_pred cccccccCcccccCcHHHHHHHHHHhhhchhhhhhHHhhccccccccccccCCCccccccccccccccCCcEEEEEEeCC
Confidence 999999999999999998 9999999999999998888888888899999999988888777554456789999999999
Q ss_pred cEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q 000657 1066 TVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK 1145 (1370)
Q Consensus 1066 sV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~ 1145 (1370)
+|+|.+|.+|||||++|+++|||||+||||+++|+|..+||+.+|++++|+|||++++.|.|+++||++||+||.+.++.
T Consensus 331 ~v~v~~~~~e~GqG~~T~~~qiaAe~Lgi~~~~V~v~~~dT~~~p~~~~t~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~ 410 (547)
T PF02738_consen 331 SVTVYTGGVEMGQGSRTALAQIAAEELGIPPEDVRVVSGDTDTTPYDGGTGGSRSTYMSGNAVRKAAEDLREKLLEIAAE 410 (547)
T ss_dssp -EEEEES--BSSSSHHHHHHHHHHHHHTS-GGGEEEEECBTTTS-SB--S-TTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecccCCcchhhhHHHHHHHHhCCChhhEEEEeCCCcCCCCCCCCccchhhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CC-----CCCHHHH--HHHhhcccccceEEEEeecCCccccccCC-CCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEE
Q 000657 1146 HN-----FNSFAEL--ASACYVQRIDLSAHGFYITPEIDFDWITG-KGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVI 1217 (1370)
Q Consensus 1146 ~~-----~~~~~~~--~~~a~~~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~ 1217 (1370)
+. ++.|++- ........+.+.+...+..+...++...+ .+..+.+++||++++|||||++||+++|+|++++
T Consensus 411 ~~~~~~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~eVeVD~~TG~v~v~~~~~~ 490 (547)
T PF02738_consen 411 ILGVDPEDLELEDGRVISPAKGVSISEAAIAAYANPPTGFDPGTGGYGPPASYYSFGAHFAEVEVDTETGEVRVLRVVAA 490 (547)
T ss_dssp HTTSSGGGEECHCHETHHHHHHEEHHHEEEHHHCTTSTTCETTTTEESBSSSEEEEEEEEEEEEEETTTSEEEEEEEEEE
T ss_pred hcccccchhhhhhhccccccccccccccccccccccccccccccccccCCccceeeeeeecccccccccccccceeeeee
Confidence 63 3445554 33333333444444443333323333321 3567788999999999999999999999999999
Q ss_pred EecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCC
Q 000657 1218 LDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVP 1281 (1370)
Q Consensus 1218 ~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP 1281 (1370)
+|||++|||++++|||+||++||||++|+|++.||+ +|+++|.+|++|++|++.|+|
T Consensus 491 ~D~G~~iNP~~v~gQi~Gg~~~Glg~al~E~~~~d~-------~G~~~~~~~~dY~ip~~~d~P 547 (547)
T PF02738_consen 491 HDCGRVINPDIVEGQIEGGIVQGLGYALYEELVYDE-------NGRPLNPNFADYKIPTAADVP 547 (547)
T ss_dssp EEEBS-SBHHHHHHHHHHHHHHHHHHHHT--BEBTT-------TSEBSTSSTTTST---GGGS-
T ss_pred ccCCcccCHHHHhhhccccHHHHHHHHhcCCeEECC-------CCcCCCCChhhCcCCCccccC
Confidence 999999999999999999999999999999999996 899999999999999999998
No 18
>PRK09971 xanthine dehydrogenase subunit XdhB; Provisional
Probab=100.00 E-value=3.4e-56 Score=511.11 Aligned_cols=279 Identities=25% Similarity=0.378 Sum_probs=261.2
Q ss_pred eEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeec-CCcEEEcccccHHHHHHHHH
Q 000657 272 KWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK-DDGLEIGAAVRLTELLKMFR 350 (1370)
Q Consensus 272 ~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~-~~~l~IGA~vTl~~l~~~l~ 350 (1370)
+|++|+|++|++++|++++++++|+||||++++++++...|+++|||++|+||+.|+.. +++|+|||+||+++|+++
T Consensus 6 ~~~~P~sl~Ea~~ll~~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~I~~~~~~~l~IGA~vt~~~l~~~-- 83 (291)
T PRK09971 6 EYHEAATLEEAIELLADNPQAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDGSIRIGAATTFTQIIED-- 83 (291)
T ss_pred ceeCCCCHHHHHHHHHhCCCCEEEeccchHHHHHhCCCCCCCeEEEcCCChhhhCeEecCCCEEEEEeCCcHHHHhcC--
Confidence 89999999999999999999999999999999999999999999999999999999965 467999999999999984
Q ss_pred HhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhccc
Q 000657 351 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY 430 (1370)
Q Consensus 351 ~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g~ 430 (1370)
+.+. ..|+.|.+++++|||+||||+||||||||+++|.||++|+|+||||+|+|.+.+| +|++|++|||.|+
T Consensus 84 ~~i~-------~~~p~L~~a~~~ia~~qIRN~aTiGGNi~~a~p~sD~~~~Llal~A~v~i~~~~g-~R~vp~~df~~g~ 155 (291)
T PRK09971 84 PIIQ-------KHLPALAEAAVSIGGPQIRNVATIGGNICNGATSADSAPPLFALDAKLEIHSPNG-VRFVPINGFYTGP 155 (291)
T ss_pred hHHH-------HHhHHHHHHHHHhCCHHHhcceecccccccCCcchhHHHHHHHcCCEEEEEcCCC-cEEEEHHHhcCCc
Confidence 3343 3588999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred ccccCCCCeEEEEEEccCCC-CccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHH
Q 000657 431 RKVDLTSGEILLSIFLPWTR-PFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTK 509 (1370)
Q Consensus 431 ~~~~L~~~Eil~~I~iP~~~-~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E 509 (1370)
+++.|+++|||++|+||.+. .+..+.+||+++|+++|||+||+|+.+++++ + +|+++||+||||+|+|+|++++|
T Consensus 156 ~~t~l~~~Eil~~I~iP~~~~~~~~~~~~K~~~R~~~~~a~v~~a~~~~~~~-g---~i~~~ria~G~v~~~p~r~~~~E 231 (291)
T PRK09971 156 GKVSLEHDEILVAFIIPPEPYEHAGGAYIKYAMRDAMDIATIGCAVLCRLDN-G---NFEDLRLAFGVAAPTPIRCQHAE 231 (291)
T ss_pred cccccCCCceEEEEEeCCCCCCCCceEEEEEcccchhhHhHheeEEEEEEcC-C---EEEEEEEEEEcccCceeeHHHHH
Confidence 99999999999999999753 3456778999999999999999999999964 4 89999999999999999999999
Q ss_pred HHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhh
Q 000657 510 TFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 565 (1370)
Q Consensus 510 ~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~ 565 (1370)
++|.|+.|++++++++.+++.+++.|.++ +++|++||++|+.+|++|++.++..+
T Consensus 232 ~~L~G~~~~~~~~~~a~~~~~~~~~p~~d-~~~s~~YR~~l~~~l~~r~l~~~~~~ 286 (291)
T PRK09971 232 QTAKGAPLNLETLEAIGELVLQDVAPRSS-WRASKEFRLHLIQELTKRVIKEAVAA 286 (291)
T ss_pred HHhCCCCCCHHHHHHHHHHHHhcCCCCCC-CCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987665 78999999999999999999998764
No 19
>PRK09908 xanthine dehydrogenase subunit XdhC; Provisional
Probab=100.00 E-value=8.7e-54 Score=435.33 Aligned_cols=150 Identities=39% Similarity=0.659 Sum_probs=141.4
Q ss_pred ceEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCc
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1370)
Q Consensus 18 ~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1370)
.+.|+|+|||++++++ ++|+++|++|||+.||||||.||++|+||||||+||+ ++|+||++|+.+++|+
T Consensus 6 ~~~i~~~vNG~~~~~~-~~~~~~Ll~~LR~~gltgtK~GC~~G~CGACtVlvdg----------~~v~SCl~~a~~~~G~ 74 (159)
T PRK09908 6 TITIECTINGMPFQLH-AAPGTPLSELLREQGLLSVKQGCCVGECGACTVLVDG----------TAIDSCLYLAAWAEGK 74 (159)
T ss_pred ceeEEEEECCEEEEEe-cCCCCcHHHHHHHcCCCCCCCCcCCCCCCCcEEEECC----------cEeehhHhhHHHhCCC
Confidence 3569999999999996 9999999999998899999999999999999999996 7999999999999999
Q ss_pred EEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCC-CCCHHHHHHHhcCcccccCCChhHHHHHH
Q 000657 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQT-PPTEEQIEESLAGNLCRCTGYRPIVDAFR 176 (1370)
Q Consensus 98 ~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~-~~~~~~i~~~l~gnlCRCtgy~~i~~a~~ 176 (1370)
+|+|||||+ ..+.+||||+||+++|++|||||||||||++++||++++. |++++||+++|+|||||||||++|++|++
T Consensus 75 ~V~TiEGl~-~~~~l~pvQ~Af~~~~a~QCGyCtPG~ims~~aLl~~~~~~~~s~~eI~~al~GNlCRCTGY~~I~~Av~ 153 (159)
T PRK09908 75 EIRTLEGEA-KGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVL 153 (159)
T ss_pred EEEeecCCC-CCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCCCCCHHHHHHHHcCCccCCCCCHHHHHHHH
Confidence 999999998 5678999999999999999999999999999999999863 33999999999999999999999999998
Q ss_pred HHH
Q 000657 177 VFA 179 (1370)
Q Consensus 177 ~~~ 179 (1370)
.+-
T Consensus 154 ~~~ 156 (159)
T PRK09908 154 DCE 156 (159)
T ss_pred HHh
Confidence 654
No 20
>TIGR03193 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamma subunit. 4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme.
Probab=100.00 E-value=8.1e-54 Score=431.33 Aligned_cols=146 Identities=44% Similarity=0.772 Sum_probs=140.4
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEE
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHV 99 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 99 (1370)
|+|+|||++++++ ++|+++|++|||++ ||||+|.||++|+||||||+||+ ++|+||++|+.+++|++|
T Consensus 2 i~~~vNG~~~~~~-~~~~~~Ll~~LR~~lgltg~K~gC~~G~CGACtVlvdg----------~~v~SCl~~~~~~~G~~V 70 (148)
T TIGR03193 2 LRLTVNGRWREDA-VADNMLLVDYLRDTVGLTGTKQGCDGGECGACTVLVDG----------RPRLACSTLAHRVAGRKV 70 (148)
T ss_pred EEEEECCEEEEee-cCCCCcHHHHHHHhcCCCCCCCCCCCCCCCCCEEEECC----------eEeeccHhhHhhcCCCcE
Confidence 7899999999986 99999999999996 99999999999999999999996 799999999999999999
Q ss_pred EEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHHH
Q 000657 100 ITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFA 179 (1370)
Q Consensus 100 ~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~ 179 (1370)
+|||||+ ..+.+||+|+||+++|++|||||||||||++++||++||.| +++||+++|+|||||||||++|++|++.++
T Consensus 71 ~TiEgl~-~~~~l~pvq~af~~~~a~QCGfCtPG~vms~~~ll~~~p~p-s~~ei~~al~GnLCRCTGY~~I~~Av~~aa 148 (148)
T TIGR03193 71 ETVEGLA-TNGRLSRLQQAFHERLGTQCGFCTPGMIMAAEALLRRNPSP-SRDEIRAALAGNLCRCTGYVKIIESVEAAA 148 (148)
T ss_pred EEeCCCC-CCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCC-CHHHHHHHHcCCccCCCCCHHHHHHHHHhC
Confidence 9999998 56789999999999999999999999999999999999999 999999999999999999999999998763
No 21
>TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit. This model represents the second largest chain, beta, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=1.9e-52 Score=479.65 Aligned_cols=277 Identities=21% Similarity=0.275 Sum_probs=253.3
Q ss_pred CceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHH
Q 000657 270 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 349 (1370)
Q Consensus 270 ~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l 349 (1370)
.|+|++|+|++||++++++++++++|+|||||+++++.+...|+++|||++||||+.|+.++++|+|||+||+++|+++
T Consensus 4 ~f~~~~P~sl~eA~~ll~~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~~l~~~- 82 (321)
T TIGR03195 4 DFRTLRPASLADAVAALAAHPAARPLAGGTDLLPNLRRGLGQPETLVDLTGIDEIAQLSTLADGLRIGAGVTLAALAED- 82 (321)
T ss_pred CceEECCCCHHHHHHHHhhCCCCEEEEccchHHHHHhcccCCCCeEEECCCChhhccEEecCCEEEEeccCcHHHHhhC-
Confidence 5899999999999999999999999999999999999998999999999999999999999999999999999999886
Q ss_pred HHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc--------------------------------------c
Q 000657 350 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC--------------------------------------T 391 (1370)
Q Consensus 350 ~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~--------------------------------------~ 391 (1370)
..++ ..|+.|.++++.|||+||||+|||||||| +
T Consensus 83 -~~i~-------~~~p~L~~a~~~ias~qIRN~aTiGGNi~~~~~c~~~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~c~ 154 (321)
T TIGR03195 83 -ALVR-------TRWPALAQAARAVAGPTHRAAATLGGNLCLDTRCIYYNQSEWWRSGNGYCLKYRGDKCHVAPKSDRCY 154 (321)
T ss_pred -hhhH-------hHhHHHHHHHHHhCCHHHhCceecHHhhhccCCCcccccccccccccccccccCCccccccCCCcccc
Confidence 3343 35899999999999999999999999999 5
Q ss_pred cCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhcc--cccccCCCCeEEEEEEccCCCCccceeeeeecccCccccc
Q 000657 392 ASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG--YRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIA 469 (1370)
Q Consensus 392 asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g--~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a 469 (1370)
++|+||++|+|+||||+|+|.+.+| +|+||++|||.| ++++.|+++|||++|+||.+ ....+.|+|+.+|...||+
T Consensus 155 a~p~sD~~~~LlAldA~v~i~~~~g-~R~vpl~dF~~~~g~~~t~L~~~Eiit~I~iP~~-~~~~~~y~k~~~r~a~~~~ 232 (321)
T TIGR03195 155 AAFSGDVAPALLVLDAEAEIVGPAG-VRRVPLAELYVEDGAAHLTLEPGEVLAAVRVPPT-GGWTSAYSKVRVRGAIDFP 232 (321)
T ss_pred CCCchHHHHHHHHcCCEEEEEeCCc-cEEEEHHHHhcccCCccccCCCCCeEEEEEecCC-CCCccEEEEEecCccccce
Confidence 7789999999999999999999999 999999999995 45799999999999999975 3345566788888899999
Q ss_pred eeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHH
Q 000657 470 LVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKS 549 (1370)
Q Consensus 470 ~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~ 549 (1370)
++++|+.+++++ + +|+++||+||||+++|+|++++ ++|.|+.|+++++++|.+++.+++.+.++ .++|++||++
T Consensus 233 ~~~vav~l~~~~-~---~i~~~ria~Ggva~~p~r~~~~-e~l~G~~~~~~~~~~a~~~~~~~~~p~~d-~~~s~~YRr~ 306 (321)
T TIGR03195 233 LAGVAVALQRDG-D---RIAGLRVALTGTNSRPLMVPGT-DALAGRPLDDAAAEEIARLVRKTSQPMRT-TLMGVKYRRR 306 (321)
T ss_pred eEEEEEEEEeCC-C---eEEEEEEEEECccCceeehHHH-HHhcCCCCCHHHHHHHHHHHHhhCCCccC-CCCCHHHHHH
Confidence 999999998874 4 8999999999999999999999 55799999999999999999999986655 4699999999
Q ss_pred hhHHHHHHHHHHHh
Q 000657 550 LTLSFFFKFFLWVS 563 (1370)
Q Consensus 550 la~~L~~k~l~~~~ 563 (1370)
|+.+|++|++.++.
T Consensus 307 l~~~l~~r~~~~~~ 320 (321)
T TIGR03195 307 VLLAIARRLVDQLW 320 (321)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 22
>COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]
Probab=100.00 E-value=1.8e-52 Score=419.69 Aligned_cols=150 Identities=49% Similarity=0.829 Sum_probs=144.3
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1370)
+.|+|+|||++++++ ++|+++|+|+|||. +|||||.||+.|.||||||++|+ ++|+||++|+++++|+
T Consensus 2 ~~i~ltvNG~~~~~~-~~p~~~Ll~~LRd~l~ltgtk~GC~~g~CGACtVlvDG----------~~v~SCl~~a~~~~G~ 70 (156)
T COG2080 2 MPITLTVNGEPVELD-VDPRTPLLDVLRDELGLTGTKKGCGHGQCGACTVLVDG----------EAVNSCLTLAVQAEGA 70 (156)
T ss_pred CcEEEEECCeEEEEE-eCCCChHHHHHHHhcCCCCcCCCCCCccCCceEEEECC----------eEehHHHHHHHHhCCC
Confidence 679999999999997 99999999999996 99999999999999999999996 8999999999999999
Q ss_pred EEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHH
Q 000657 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1370)
Q Consensus 98 ~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1370)
+|+|||||+.++..|||+|+||++++++|||||||||||++++||+++|.| +++||+++|+||+||||||..|++|++.
T Consensus 71 ~ItTiEGl~~~~~~l~~vQ~Af~e~~~~QCGyCtpG~Imsa~~lL~~~~~p-s~~eI~~~lsGnlCRCt~Y~~I~~Ai~~ 149 (156)
T COG2080 71 EITTIEGLAKKDGGLHPVQQAFLEHDAFQCGYCTPGQIMSATALLDRNPAP-TDEEIREALSGNLCRCTGYQNIVAAILD 149 (156)
T ss_pred eEEEeecccCCCCCcCHHHHHHHHcCCCcCCCCcHHHHHHHHHHHHhCCCC-CHHHHHHHHhcCccccCCHHHHHHHHHH
Confidence 999999999555678999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred HHh
Q 000657 178 FAK 180 (1370)
Q Consensus 178 ~~~ 180 (1370)
++.
T Consensus 150 aa~ 152 (156)
T COG2080 150 AAE 152 (156)
T ss_pred HHH
Confidence 874
No 23
>TIGR03199 pucC xanthine dehydrogenase C subunit. This gene has been characterized in B. subtilis as the FAD binding-subunit of xanthine dehydrogenase (pucC), acting in conjunction with pucD, the molybdopterin-binding subunit and pucE, the FeS-binding subunit.
Probab=100.00 E-value=2.9e-51 Score=464.81 Aligned_cols=261 Identities=22% Similarity=0.332 Sum_probs=241.9
Q ss_pred cCCHHHHHHHHhhCCCcEEEeccCcceeeeeec-ccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHHHHhhh
Q 000657 276 PLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLK-RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVT 354 (1370)
Q Consensus 276 P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~-~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~i~ 354 (1370)
|+||+||+++|+++++++++|||||+++.++.+ ...|+++|||++|+||+.|+.++++|+|||+||+++|+++ ..+.
T Consensus 1 P~sl~ea~~ll~~~~~a~ivaGgT~l~~~~~~~~~~~~~~lIdi~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~--~~i~ 78 (264)
T TIGR03199 1 PAALDEAWSLLEKAPDSTFVSGSTLLQLQWEKGTLPMKQHLVSLEGIDELKGISTSDTHVSIGALTTLNECRKN--PLIK 78 (264)
T ss_pred CCCHHHHHHHHHhCCCCEEEEccChHHHHHhcCcCCCCCeEEEcCCChhhCcEEecCCEEEEecCCcHHHHhhC--hHhH
Confidence 899999999999999999999999999998777 4668999999999999999999999999999999999864 2222
Q ss_pred cCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhccccccc
Q 000657 355 ERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVD 434 (1370)
Q Consensus 355 ~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g~~~~~ 434 (1370)
+.|+.|++++++|||+||||+||+|||||++ .||++|+|+||||+|+|.+ +| +|+||++|||++ ++
T Consensus 79 -------~~~p~L~~a~~~ia~~qIRN~aTlGGNl~~~--~sD~~p~Llal~A~v~i~~-~g-~r~vp~~~f~~~---~~ 144 (264)
T TIGR03199 79 -------RALPCFVDAASAIAAPGVRNRATIGGNIASG--IGDFIPALLVLGAELIVYQ-KE-LIRLPLGAWLSE---ED 144 (264)
T ss_pred -------hHhHHHHHHHHHhcCHHHhcceecHHhccCc--ccchHHHHHHcCCEEEEEe-CC-EEEEEHHHhhhc---cC
Confidence 4689999999999999999999999999998 7999999999999999999 88 999999999984 58
Q ss_pred CCCCeEEEEEEc-cCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHHHhc
Q 000657 435 LTSGEILLSIFL-PWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIV 513 (1370)
Q Consensus 435 L~~~Eil~~I~i-P~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E~~L~ 513 (1370)
|.++|||++|+| |.+.++.++.+||+++|..+++++||+|+.+++++++ +|+++||+||||+|+|+|++++|++|.
T Consensus 145 l~~~Eii~~I~i~p~~~~~~~~~~~k~~~R~~~~~a~v~~a~~~~~~~~~---~i~~~ria~Ggv~~~p~r~~~~E~~L~ 221 (264)
T TIGR03199 145 FKPTAIVTRVIIGPRAETGEFVFYHKVGRRETFTGSLVVVAGRFLLDGSQ---TIKEIRLAVGGADITPRRLLDSEAKLM 221 (264)
T ss_pred CCCCcEEEEEEEECCCCCCCcEEEEEEeccchhHHHHheeeEEEEEcCCC---eEEEEEEEeecCCCceeeHHHHHHHhc
Confidence 999999999999 7665567788999999999999999999999998666 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHH
Q 000657 514 GKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFF 556 (1370)
Q Consensus 514 Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~ 556 (1370)
||+|++++++++.+.+.+++.+.+ ++++|++||++|+++|+.
T Consensus 222 G~~~~~~~~~~a~~~~~~~~~p~~-d~~~s~~YR~~l~~~~~~ 263 (264)
T TIGR03199 222 APPWDPHLLAELYKTIIQELPFSS-DPFATAAYRKKVAANVIV 263 (264)
T ss_pred CCCCCHHHHHHHHHHHHhhCCCCC-CCCCCHHHHHHHHHHHhc
Confidence 999999999999999999998665 578999999999999874
No 24
>TIGR03198 pucE xanthine dehydrogenase E subunit. This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.
Probab=100.00 E-value=6.1e-52 Score=421.87 Aligned_cols=146 Identities=38% Similarity=0.778 Sum_probs=140.7
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcE
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH 98 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 98 (1370)
.|+|+|||++++++ ++|+++|++|||+. +|||||.||++|.||||||+||+ ++|+||++|+.+++|++
T Consensus 3 ~i~f~vNG~~~~~~-~~~~~~Ll~~LR~~~~ltgtK~gC~~G~CGACtVlvdG----------~~v~SCl~~~~~~~G~~ 71 (151)
T TIGR03198 3 QFRFTVNGQAWEVA-AVPTTRLSDLLRKELQLTGTKVSCGIGRCGACSVLIDG----------KLANACLTMAYQADGHE 71 (151)
T ss_pred cEEEEECCEEEEee-cCCCcHHHHHHHhccCCCCCCCCCCCCcCCccEEEECC----------cEEechHHHHHHhcCCE
Confidence 48999999999996 89999999999996 99999999999999999999996 69999999999999999
Q ss_pred EEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHH
Q 000657 99 VITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVF 178 (1370)
Q Consensus 99 i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~ 178 (1370)
|+|||||+ .+.+||+|+||+++|++|||||||||||++++||+++|.| +++||+++|+|||||||||++|++|++++
T Consensus 72 v~TiEgl~--~~~l~pvQ~af~~~~a~QCGfCtpG~im~~~~ll~~~p~p-~~~ei~~al~gnlCRCtgY~~I~~Av~~~ 148 (151)
T TIGR03198 72 ITTIEGIA--ENELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRETPQP-SDEDMEEGLSGNLCRCTGYGGIIRSACRI 148 (151)
T ss_pred EEecCCcC--CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCC-CHHHHHHHHcCCCcCCCCCHHHHHHHHHH
Confidence 99999997 3679999999999999999999999999999999999999 99999999999999999999999999988
Q ss_pred H
Q 000657 179 A 179 (1370)
Q Consensus 179 ~ 179 (1370)
+
T Consensus 149 ~ 149 (151)
T TIGR03198 149 R 149 (151)
T ss_pred h
Confidence 6
No 25
>COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]
Probab=100.00 E-value=2.7e-50 Score=450.38 Aligned_cols=279 Identities=28% Similarity=0.399 Sum_probs=257.4
Q ss_pred CceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCc-EEEcccccHHHHHHH
Q 000657 270 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDG-LEIGAAVRLTELLKM 348 (1370)
Q Consensus 270 ~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~-l~IGA~vTl~~l~~~ 348 (1370)
.|+|++|+|++||+.+++.++++++++|||+|...||.+...|..+|||++++++..+...+++ |+|||+||+++|.++
T Consensus 3 ~f~y~rp~Sv~eA~~ll~~~~~a~~laGGt~L~~~~k~~~~~p~~lVdI~~l~~~~~~~~~~g~~l~IGA~vt~~ei~~~ 82 (284)
T COG1319 3 NFEYYRPASVEEALNLLARAPDAKYLAGGTDLLPLMKLGIERPDHLVDINGLDELLGIVTTEGGSLRIGALVTLTEIARH 82 (284)
T ss_pred ceEEECCCCHHHHHHHHHhCCCcEEeeCcchHHHHhhcccCCcceEEEecCChhhhceEeecCCEEEEeecccHHHHHhC
Confidence 4899999999999999999999999999999999999999999999999999988888877666 999999999999987
Q ss_pred HHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhc
Q 000657 349 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFL 428 (1370)
Q Consensus 349 l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~ 428 (1370)
..++ ..||.|.+++..+||+||||+||||||||+++|.+|++|+|+||||+|++.+..| +|++|++|||.
T Consensus 83 --~~~~-------~~~p~L~ea~~~ia~~qvRN~aTiGGn~c~a~p~aD~~~aLlaLdA~v~~~~~~g-~r~i~~~~f~~ 152 (284)
T COG1319 83 --PAVR-------RIPPALSEAASAIASPQVRNRATIGGNLCNADPAADLAPALLALDAEVEIRSPGG-ERTIPIEDFFR 152 (284)
T ss_pred --hhhh-------hhchHHHHHHHHhcChhhcceeeecchhccCCCchhhHHHHHHcCCEEEEecCCc-cEEEEHHHhhc
Confidence 4344 4689999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHH
Q 000657 429 GYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKT 508 (1370)
Q Consensus 429 g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~ 508 (1370)
|+.+|.|++|||||+|+||.+..+..+.+.|+.+|...+++.|.+|..++.+ +|.++||+|||++++|+|+.++
T Consensus 153 ~p~~t~l~~gelit~v~lP~~~~~~~~~~kk~r~r~~~~~~~vsvA~~~~~~------~v~~~RvAlgg~a~~p~R~~~~ 226 (284)
T COG1319 153 GPGETALEPGELITAVILPPPPAARGAYYKKVRRRASFAIALVSVAAKLRGD------RVSEARVALGGVAPKPWRLEDA 226 (284)
T ss_pred CccccccCCCcEEEEEEcCCCccCCccEEEEeecchhhhHHHHHHHhhhccc------ceeeeeeeecccCCcceehHHH
Confidence 9999999999999999999984334444446666788999999999998765 6899999999999999999999
Q ss_pred HHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhh
Q 000657 509 KTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 565 (1370)
Q Consensus 509 E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~ 565 (1370)
|+.|.|+++++++++.+.+.+.+++.|.+ ++++|++||++|+++++.|.+.++..+
T Consensus 227 E~~L~~~~l~~~~~~~~~~~~~~~~~p~~-d~r~s~~yr~~l~~~~~~ral~~a~~~ 282 (284)
T COG1319 227 EAALLGKPLSLETLEAAAEAAMQEAAPIS-DVRGSAEYRRKLAKVLLARALAEAQGR 282 (284)
T ss_pred HHHhhCCCCChHHHHHHHHHhhcccCCcc-cccchHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999998766 679999999999999999999998764
No 26
>PRK11433 aldehyde oxidoreductase 2Fe-2S subunit; Provisional
Probab=100.00 E-value=4.3e-50 Score=427.10 Aligned_cols=152 Identities=41% Similarity=0.721 Sum_probs=144.1
Q ss_pred CcceEEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhcc
Q 000657 16 GWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL 94 (1370)
Q Consensus 16 ~~~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~ 94 (1370)
+....|+|+|||++++++ ++|+++||++||++ +|||+|.||++|.||||||+||+ ++++||++++.++
T Consensus 47 ~~~~~i~~~VNG~~~~~~-v~~~~tLLd~LR~~l~ltGtK~GC~~G~CGACTVlVdG----------~~v~SCl~la~~~ 115 (217)
T PRK11433 47 PEISPVTLKVNGKTEQLE-VDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLVNG----------RRLNACLTLAVMH 115 (217)
T ss_pred CcCceEEEEECCEEEEEe-cCCCCcHHHHHHHhcCCCCCCCCCCCCCcCceEEEECC----------EEeeeeeeehhhc
Confidence 345789999999999996 99999999999996 99999999999999999999996 7899999999999
Q ss_pred CCcEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHc---------------CCCCCCHHHHHHHhc
Q 000657 95 EGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRS---------------SQTPPTEEQIEESLA 159 (1370)
Q Consensus 95 ~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~---------------~~~~~~~~~i~~~l~ 159 (1370)
+|++|+|||||+ ..+.+||+|+||+++|++|||||||||||++++||++ +|.| +++||+++|+
T Consensus 116 ~G~~ItTiEGL~-~~~~lhpvQ~Af~~~~a~QCGyCTPG~imsa~alL~~~~~~~~~~~~~~~~~~p~p-t~~eIreals 193 (217)
T PRK11433 116 QGAEITTIEGLG-SPDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGIPSHVTVDLTAAPEL-TADEIRERMS 193 (217)
T ss_pred CCCEEEEeCCcC-CCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHhccccCccccccccccCCCC-CHHHHHHHHc
Confidence 999999999998 5678999999999999999999999999999999998 6778 9999999999
Q ss_pred CcccccCCChhHHHHHHHHHh
Q 000657 160 GNLCRCTGYRPIVDAFRVFAK 180 (1370)
Q Consensus 160 gnlCRCtgy~~i~~a~~~~~~ 180 (1370)
|||||||||++|++|++.++.
T Consensus 194 GNlCRCtgY~~Iv~Av~~~a~ 214 (217)
T PRK11433 194 GNICRCGAYSNILEAIEDVAG 214 (217)
T ss_pred CCccCCCCcHHHHHHHHHHHh
Confidence 999999999999999999874
No 27
>PRK09799 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.5e-47 Score=428.20 Aligned_cols=250 Identities=20% Similarity=0.336 Sum_probs=221.8
Q ss_pred eEEecCCHHHHHHHHhhCC-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHHH
Q 000657 272 KWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFR 350 (1370)
Q Consensus 272 ~~~~P~sl~e~l~ll~~~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l~ 350 (1370)
+|++|+|++|+++++++++ +++++||||||++.+ +...|+++|||++| ||++|+.++++|+|||+||+++|+++.
T Consensus 4 ~y~~P~sl~Ea~~ll~~~~~~a~ilAGGT~L~~~~--~~~~~~~lIdi~~i-eL~~I~~~~~~l~IGA~vT~~~l~~~~- 79 (258)
T PRK09799 4 QFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATP--TRTDKKIAISLQDL-ELDWIEWDNGALRIGAMSRLQPLRDAR- 79 (258)
T ss_pred cEeCCCCHHHHHHHHHhCCCCCEEEecCCChHhhh--CCCCCCEEEEcCCC-CCCeEEecCCEEEEccCCcHHHHHhCc-
Confidence 7999999999999999995 699999999998764 45578999999999 999999999999999999999998762
Q ss_pred HhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhccc
Q 000657 351 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY 430 (1370)
Q Consensus 351 ~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g~ 430 (1370)
.+ -+.|+++++.+||+||||+||||||||+++|.||++|+|+||||+|+|.+. |++|++|||.|+
T Consensus 80 -~~----------~~~L~~a~~~vas~qIRN~aTiGGNl~~a~p~sD~~p~LlAldA~v~l~~~----r~vpl~~f~~g~ 144 (258)
T PRK09799 80 -FI----------PAALREALGFVYSRHLRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNG----ETLSIEDYLACP 144 (258)
T ss_pred -cc----------HHHHHHHHHHhCCHHHhccchhHHHhhcCCccHHHHHHHHHcCCEEEEecC----cEEeHHHhcCCC
Confidence 11 137999999999999999999999999999999999999999999999873 799999999984
Q ss_pred ccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHH
Q 000657 431 RKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKT 510 (1370)
Q Consensus 431 ~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E~ 510 (1370)
++|||++|+||.+. ..+.+||++ |+.+|+|+||+|+++++++ .+||+||||+++|+|++++|+
T Consensus 145 ------~~Eil~~I~iP~~~--~~~~~~K~~-r~~~~~a~v~~A~~~~~~~--------~~ria~Ggv~~~p~r~~~~E~ 207 (258)
T PRK09799 145 ------CDRLLTEIIIPDPY--RTCATRKIS-RSQAGLTVVTAAVALTDHD--------GMRIALDGVASKPLRLHDVEK 207 (258)
T ss_pred ------CCcEEEEEEcCCCC--CcceEEEec-ccccChhhheeEEEEEEcC--------CeEEEEECCCCcccchHHHhc
Confidence 79999999999753 456788996 8889999999999998752 389999999999999999999
Q ss_pred HhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhh
Q 000657 511 FIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 565 (1370)
Q Consensus 511 ~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~ 565 (1370)
|.++++++.++++ +++.+.++ .++|++||++++.+|+.|+|.++.+.
T Consensus 208 ----~~~~~~~~~~a~~---~~~~p~~d-~~~s~~YR~~~~~~l~~r~l~~~~~~ 254 (258)
T PRK09799 208 ----QNLEGNALEQAVA---NAIFPQED-LRGSVAYKRYIAGVLVADLYADCQQA 254 (258)
T ss_pred ----CCCCHHHHHHHHH---hcCCCCcc-CCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999887644 66665544 48999999999999999999997763
No 28
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit. This protein is suggested by Bebien, et al., to be the FAD-binding subunit of a molydbopterin-containing selenate reductase. Our comparative genomics suggests it to be a subunit of a selenium-dependent molybdenum hydroxylase for an unknown substrate.
Probab=100.00 E-value=5.2e-46 Score=418.11 Aligned_cols=249 Identities=19% Similarity=0.318 Sum_probs=219.0
Q ss_pred eEEecCCHHHHHHHHhhCC-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHHH
Q 000657 272 KWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFR 350 (1370)
Q Consensus 272 ~~~~P~sl~e~l~ll~~~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l~ 350 (1370)
+|++|+|++|++++|++++ +++++||||||.+.++ ...++++|||++| ||+.|+.++++|+|||+||+++|+++
T Consensus 3 ~y~~P~sl~Ea~~ll~~~~~~a~~lAGGTdL~~~~~--~~~~~~lIdl~~i-eL~~I~~~~~~l~IGA~~t~~~l~~~-- 77 (257)
T TIGR03312 3 QFFRPESTIQALELKKRHTGVAVWFAGGSKLNATPT--RTDKKVAISLDKL-ALDKIELQGGALHIGAMCHLQSLIDN-- 77 (257)
T ss_pred ceECCCCHHHHHHHHHhCCCCCEEEecCcchhhhhc--ccCCCEEEEcCCC-CCCcEEecCCEEEEEeCCcHHHHHhC--
Confidence 6999999999999999996 6999999999987654 4467899999999 99999999999999999999999876
Q ss_pred HhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhccc
Q 000657 351 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY 430 (1370)
Q Consensus 351 ~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g~ 430 (1370)
..++ ..|.+++.++|++||||+||+|||||+++|.||++|+|+||||+++|.+. |++|++|||.|+
T Consensus 78 ~~~~----------~~L~~aa~~va~~qIRN~gTlGGNl~~a~p~~D~~~~LlaldA~v~l~~~----r~vp~~dF~~g~ 143 (257)
T TIGR03312 78 ELTP----------AALKEALGFVYSRHIRNQATIGGEIAAFQSESLLLPVLLALKATVVLANA----SQMDIEDYLASE 143 (257)
T ss_pred cchH----------HHHHHHHHHhCCHHHhccccHHHHhhcCCCchHHHHHHHHcCCEEEEecC----cEEeHHHhcCCC
Confidence 1111 26999999999999999999999999999999999999999999999865 799999999985
Q ss_pred ccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHH
Q 000657 431 RKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKT 510 (1370)
Q Consensus 431 ~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E~ 510 (1370)
++|||++|+||.+. ..+.++|+ .|+..|||+||+|+.+++++ ++||+|||++|+|+|++++|+
T Consensus 144 ------~~Ell~~V~iP~~~--~~~~~~k~-~R~~~~~a~v~~A~~~~~~~--------~~ria~ggv~~~p~r~~~~E~ 206 (257)
T TIGR03312 144 ------QRELIVEVIIPNPN--LMCATRNI-SRSAAGLAVVTAAVAVDQKG--------NMRIALDGVSPVPVRLRDVEA 206 (257)
T ss_pred ------CCcEEEEEEcCCCC--CCceEEEe-cCcccchhhheeEEEEEecC--------CEEEEEEccCCceeehHHHhh
Confidence 69999999999763 35677889 78899999999999998752 389999999999999999999
Q ss_pred HhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhh
Q 000657 511 FIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSH 564 (1370)
Q Consensus 511 ~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~ 564 (1370)
. .++++.++++ +.+++.|. ++.++|++||++|+++|++|++.++.+
T Consensus 207 ~----~~~~~~~~~~---~~~~~~p~-~D~r~sa~YRr~~~~~l~~r~l~~~~~ 252 (257)
T TIGR03312 207 Q----DLKGEALEQA---VADAIHPV-ADLCGSVAYKRYIAGVVVADLLAECQQ 252 (257)
T ss_pred C----cCCHHHHHHH---HHhcCCCC-CCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5 6777877654 55666644 446899999999999999999999876
No 29
>PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain. They include aldehyde oxidase (1.2.3.1 from EC), that converts an aldehyde and water to an acid and hydrogen peroxide, and xanthine dehydrogenase (1.1.1.204 from EC), that converts xanthine to urate. These enzymes require molybdopterin and FAD as cofactors and have and two 2FE-2S clusters. Another enzyme that contains this domain is the Pseudomonas thermocarboxydovorans carbon monoxide oxygenase.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2E1Q_C 2CKJ_A 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B ....
Probab=100.00 E-value=2.2e-39 Score=344.06 Aligned_cols=170 Identities=40% Similarity=0.666 Sum_probs=151.1
Q ss_pred CceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHH
Q 000657 270 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 349 (1370)
Q Consensus 270 ~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l 349 (1370)
+++|++|+|++||+++++.++++++|||||+++++++.+...|+.+|||++|+||+.|+.++++|+|||+||+++++++
T Consensus 2 ~~~~~~P~sl~ea~~ll~~~~~a~~vaGgT~l~~~~~~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~l~~~- 80 (171)
T PF00941_consen 2 PFEYFRPKSLEEALELLAKGPDARIVAGGTDLGVQMREGILSPDVLIDLSRIPELNGISEDDGGLRIGAAVTLSELEES- 80 (171)
T ss_dssp S-EEEE-SSHHHHHHHHHHGTTEEEESS-TTHHHHHHTTS---SEEEEGTTSGGGG-EEEETSEEEEETTSBHHHHHHH-
T ss_pred CeEEEccCCHHHHHHHHhcCCCCEEEeCCCccchhcccCccccceEEEeEEecccccEEEeccEEEECCCccHHHHhhc-
Confidence 5899999999999999999999999999999999999998899999999999999999999999999999999999998
Q ss_pred HHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhcc
Q 000657 350 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG 429 (1370)
Q Consensus 350 ~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g 429 (1370)
+.+. +.|+.|+++++++||+||||+||||||||+++|.||++|+|+||||+|+|.+.+| +|++|++|||+|
T Consensus 81 -~~~~-------~~~p~L~~~~~~ias~~IRn~aTiGGNl~~~~~~sD~~~~Llal~A~v~i~~~~g-~r~~~~~~f~~g 151 (171)
T PF00941_consen 81 -PLIQ-------QYFPALAQAARRIASPQIRNRATIGGNLCNASPASDLAPALLALDARVEIASPDG-TRTVPLEDFFTG 151 (171)
T ss_dssp -HHHH-------HHHHHHHHHHCTSS-HHHHTT-BHHHHHHHTBTT-SHHHHHHHTT-EEEEEETTE-EEEEEGGGGEEC
T ss_pred -chhh-------hhHHHHHHHHHHhCCHhHeeeeeeccccccCcccccHHHHHHHhCcEEEEEcCCe-eEEEEHHHhcCc
Confidence 3333 4789999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccccCCCCeEEEEEEccCC
Q 000657 430 YRKVDLTSGEILLSIFLPWT 449 (1370)
Q Consensus 430 ~~~~~L~~~Eil~~I~iP~~ 449 (1370)
+++++|++||||++|+||.+
T Consensus 152 ~~~~~l~~~eli~~I~iP~~ 171 (171)
T PF00941_consen 152 PRKTDLEPGELITSIRIPKP 171 (171)
T ss_dssp TTEESS-TTEEEEEEEEES-
T ss_pred cccccCCCCcEEEEEECCCC
Confidence 99999999999999999974
No 30
>PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases. The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A ....
Probab=99.96 E-value=9.8e-31 Score=235.65 Aligned_cols=75 Identities=61% Similarity=1.136 Sum_probs=64.5
Q ss_pred EeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHH
Q 000657 101 TVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1370)
Q Consensus 101 TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1370)
|||||+ +++.+||||+||+++|++|||||||||||++++||++++.| +++||+++|+|||||||||++|++|++.
T Consensus 1 TvEGl~-~~~~~~~iq~af~~~~a~QCGfCtpG~im~~~~ll~~~~~p-~~~ei~~al~gnlCRCTgY~~I~~Av~~ 75 (75)
T PF01799_consen 1 TVEGLA-SDGELHPIQQAFVEHGAVQCGFCTPGMIMAAYALLRRNPDP-TEEEIREALSGNLCRCTGYRPIVEAVRQ 75 (75)
T ss_dssp -GGGSS-BTTB--HHHHHHHHTT--SSSSSHHHHHHHHHHHHHHSSS--CHHHHHHHTTTS--SSSTSHHHHHHHH-
T ss_pred CcCcCC-CCCCcCHHHHHHHHhCCCcCCcchHHHHHHHHHHhhcccch-hhHHHHHHHHcCccCCCCcHHHHHHHhC
Confidence 899998 68899999999999999999999999999999999999999 9999999999999999999999999973
No 31
>PF01315 Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; InterPro: IPR000674 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1N63_E 1N60_B 1ZXI_E 1N5W_E 1N62_B 1N61_E 3AN1_B 2E3T_A 1WYG_A 2W3R_D ....
Probab=99.95 E-value=2.1e-28 Score=241.00 Aligned_cols=107 Identities=50% Similarity=0.674 Sum_probs=92.0
Q ss_pred cceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCC--CCcc--ccccccCeEE
Q 000657 621 TGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGP--VVAD--EELFASEVVT 696 (1370)
Q Consensus 621 tG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~--~~~d--~~~la~~~V~ 696 (1370)
||+++|++|+++ |||||+++||||++||+|++||+++|+++|||++|+|++|+|+.+..+. ...+ +|+|++++|+
T Consensus 1 TG~a~Y~~Di~~-~~~l~~~~vrS~~a~a~I~sid~~~A~~~pGV~~v~t~~Dip~~~~~~~~~~~~~~~~~~la~~~V~ 79 (111)
T PF01315_consen 1 TGEARYVDDIPP-PGMLYAAFVRSPIAHARIKSIDTSEALAMPGVVAVITAEDIPGINPNGGLPIPHDEPQPVLADDKVR 79 (111)
T ss_dssp TT-S-BGGGSCS-TTTEEEEEEE-SSSSEEEEEEEGHHHHHSTTEEEEEEGGGHSSGSEESCSCSTTSSEEESS-SSEES
T ss_pred CcCeEcccccCC-CCCeEEEEEecCcCcEEEEEEecHHHccCCCEEEEEEecccCccccCccccccCCCceEeccCCeEe
Confidence 899999999998 7999999999999999999999999999999999999999998775543 3334 4799999999
Q ss_pred ecCCeEEEEEeCCHHHHHHhcccceeEEeecC
Q 000657 697 CVGQVIGVVVAETHEEAKLASRKVQVEYEELP 728 (1370)
Q Consensus 697 y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp 728 (1370)
|+|||||+|||+|+++|++|+++|+|+||+||
T Consensus 80 y~GqpVa~VvAet~~~A~~Aa~~V~V~Ye~lp 111 (111)
T PF01315_consen 80 YVGQPVALVVAETREAARDAAELVKVEYEELP 111 (111)
T ss_dssp STT-EEEEEEESSHHHHHHHHHT-EEEEEE--
T ss_pred ECCCeEEEEEECCHHHHHHHhcCcEEEeEeCC
Confidence 99999999999999999999999999999987
No 32
>PF03450 CO_deh_flav_C: CO dehydrogenase flavoprotein C-terminal domain; InterPro: IPR005107 Proteins containing this domain form structural complexes with other known families, such as IPR008274 from INTERPRO and IPR001041 from INTERPRO]. The carbon monoxide (CO) dehydrogenase of Oligotropha carboxidovorans is a heterotrimeric complex composed of a apoflavoprotein, a molybdoprotein, and an iron-sulphur protein. It can be dissociated with sodium dodecylsulphate []. CO dehydrogenase catalyzes the oxidation of CO according to the following equation []: CO + H2O = CO2 + 2e + 2H+ Subunit S represents the iron-sulphur protein of CO dehydrogenase and is clearly divided into a C- and an N-terminal domain, each binding a [2Fe-2S] cluster [].; PDB: 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B 3UNI_A 3AMZ_A ....
Probab=99.73 E-value=2e-17 Score=161.60 Aligned_cols=102 Identities=26% Similarity=0.432 Sum_probs=95.8
Q ss_pred eeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccC
Q 000657 457 EFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILK 536 (1370)
Q Consensus 457 ~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~ 536 (1370)
+||+++|+.+|||++|+|+.+.+++++ +|+++||++||++++|+|++++|++|.|++|++++++++.+.+.+++.+.
T Consensus 2 ayk~~~R~~~d~a~v~~a~~~~~~~~~---~i~~~ria~g~v~~~p~r~~~~E~~L~g~~~~~~~~~~~~~~~~~~~~~~ 78 (103)
T PF03450_consen 2 AYKIGRRKANDIAIVNVAVLVSVDDDG---RIEDARIAVGGVAPTPVRAEEVEAALIGKPLSEETLEEAAEAVSEEIDPI 78 (103)
T ss_dssp EEEESSSSSSSSSSEEEEEEEEEETTS---EEEEEEEEEESSSSSTEE-HHHHHHTTTSBSSHHHHHHHHHHHHHHTHHC
T ss_pred CeeccCccccHHHHHhhhheEEEecCc---eEEEEEEEEeccccceeehHHHHHHHhhcchhhhhHHHHHHHHHhcCCCC
Confidence 569999999999999999999999887 99999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCChhhHHHhhHHHHHHHHHHH
Q 000657 537 EDAPGGMVDFRKSLTLSFFFKFFLWV 562 (1370)
Q Consensus 537 ~~~~~~s~~YR~~la~~L~~k~l~~~ 562 (1370)
++ .++|++||++|+.+|++|+|.++
T Consensus 79 ~d-~r~s~~YR~~l~~~l~~ral~~~ 103 (103)
T PF03450_consen 79 SD-MRASAEYRRHLARVLVRRALEEV 103 (103)
T ss_dssp TT-TTBTHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 66 68999999999999999999874
No 33
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=99.53 E-value=3.9e-15 Score=191.06 Aligned_cols=474 Identities=15% Similarity=0.078 Sum_probs=289.0
Q ss_pred cCCCCccC-CcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCC
Q 000657 601 TKHGTSVG-SPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR 679 (1370)
Q Consensus 601 ~~~~~~iG-~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~ 679 (1370)
+..+.++| ...++ |+. ++|+.+.|..|..+ ++||+..+.+++..-..|.. |...+...++++.+.-.
T Consensus 179 ~~~~E~~g~~a~~~-d~~-~lt~~~~tQ~~~~~-~~~l~~~l~~p~~~vrvi~~-dvGggfG~K~~~~~~~~-------- 246 (731)
T COG1529 179 PNPMEPHGVVAVPD-DGD-KLTVWASTQIPHRL-RGMLAAVLGIPPSKVRVISP-DVGGGFGSKGVVYVEEI-------- 246 (731)
T ss_pred ccCcccccceeeEc-CCC-eEEEEEccCCchHH-HHHHHHHhCCCHHHeEEecC-CCCcccCCcccceeHHH--------
Confidence 35677888 67888 777 99999999999998 79999999955555444544 88877777776443322
Q ss_pred CCCCCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCc-CCCHHHHH-hccCCCCC-CccccccCC--
Q 000657 680 IGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPA-ILSIQEAI-DAKSFHPN-TERCFRKGD-- 754 (1370)
Q Consensus 680 ~g~~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~-v~~~~~A~-~~~a~~~~-~~~~~~~Gd-- 754 (1370)
.+-. +++++..++.+....+...+.....+. ..+..-+. +++.+... .......|+
T Consensus 247 ----------~~~~---------aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~ 307 (731)
T COG1529 247 ----------LAAL---------AAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYN 307 (731)
T ss_pred ----------HHHH---------HHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCcc
Confidence 1101 122222222222222222222111111 11111111 11111000 011122333
Q ss_pred ---cccccc-cCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEec
Q 000657 755 ---VDICFQ-SGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTK 830 (1370)
Q Consensus 755 ---v~~af~-~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~ 830 (1370)
+...+. .....+.++..|..++..|..||| ++..... ++. ..||.+...+..+|+.|||++.+||++..
T Consensus 308 ~~~~~~~~~~~~~g~Y~i~~~~~~~~~v~tn~~p-~~~~Rg~--g~~----~~~~a~E~~~d~lA~~Lgidp~eiR~~n~ 380 (731)
T COG1529 308 GPTVPAAAAGLARGPYKIEAVYIEPYLVHTNMPP-NGAYRGA--GRP----EGTFALERAVDELAEELGIDPVEIRLRNL 380 (731)
T ss_pred ccchhHHHHHhcCCceecccceeeeEEEEcCCCC-CcccccC--CCc----hhHHHHHHHHHHHHHHhCCCHHHHhhhhc
Confidence 222220 023446899999999999999999 6666543 222 89999999999999999999999999999
Q ss_pred ccCCCCC-CCCccchHHHHHHHHHHHcCC---CCEEEEeChHHHHhhcCCCccEEEE--------EEEeeCCCCcEEEEE
Q 000657 831 RIGGGFG-GKETRSAFIAAAAAVPSFLLN---RPVNLTLDRDIDMMISGQRHSFLGK--------YKVGFTNEGKVLALD 898 (1370)
Q Consensus 831 ~vGGgFG-gK~~~~~~~~~~aAlaA~~~g---RPVkl~~sR~E~~~~~~~R~~~~~~--------~k~g~~~dG~i~a~~ 898 (1370)
.-+|+|| ++...+.++...+..++++++ ||+|..|+|++++.....+.-.... .++-++.||+++...
T Consensus 381 ~~~g~~~~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~~~~~~~~~~~~~a~v~~~~~g~v~v~~ 460 (731)
T COG1529 381 IRGGPFGLGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAMYTEPSGAGPGEGARVRLEADGTVTVRT 460 (731)
T ss_pred cccCCCCCcccccCccHHHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEEEEEeccCCCCCcEEEEEcCCCcEEEEE
Confidence 9999999 554444556667778888887 9999999999998876555554333 334445567766554
Q ss_pred EEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHH
Q 000657 899 LEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEE 978 (1370)
Q Consensus 899 ~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e 978 (1370)
... +.| .+.-........-.|.||+-+++.....|..++ .+||.+|+..+.|+.|.+++++++..+.||..
T Consensus 461 g~~--~~G------~G~~t~~~q~~ae~lgip~~~V~v~~gDt~~~~-~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~ 531 (731)
T COG1529 461 GAT--DIG------QGTDTVLAQIAAEELGIPPDDVEVVHGDTDVPV-GGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVA 531 (731)
T ss_pred CCc--cCC------CcHHHHHHHHHHHHhCCCHHHEEEEecCCCCCC-CCCCCcCcccccchHHHHHHHHHHHHHHHHHH
Confidence 332 112 111111122235679999999988888998775 78999999999999999999999999999999
Q ss_pred HHHHhcCCCCCccccCccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEE
Q 000657 979 IREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGAL 1058 (1370)
Q Consensus 979 ~Rl~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~ 1058 (1370)
+|+..-....+ -.|+.......|..+..........++-+.+|+++... |+... .......-++
T Consensus 532 aa~~l~~~~~~--------------~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~-~~~~~A~~~E 595 (731)
T COG1529 532 AARMLGADAED--------------VVLEDGAFKVGGGDRRSAVSLKEVAGKGLAPGLAVAAS-FGSDN-TYPYGAHIAE 595 (731)
T ss_pred HHhhhCCChhH--------------eeeccCeeeeccCCccceeeHHHhhhccccCccccccc-ccccc-cccceeEEEE
Confidence 99876221111 13444444455543211000000001113456665422 22110 0001234588
Q ss_pred EEEe-cCCcEEEE--EcCccCCcchHH-------------HHHHHHHHHh----------------------CCCcccEE
Q 000657 1059 VHVY-TDGTVLVT--HGGVEMGQGLHT-------------KVAQVAASAF----------------------NIPLSSVF 1100 (1370)
Q Consensus 1059 V~l~-~DGsV~V~--~g~~e~GqG~~T-------------~~~qiaAe~L----------------------gip~~~V~ 1100 (1370)
|+++ .+|+|.|. ....|.|.=++= .+.|..-|+. .+|.-.|+
T Consensus 596 V~Vd~~tG~vrV~r~~~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d~~g~~~~~n~~dY~ip~~~d~P~iev~ 675 (731)
T COG1529 596 VEVDPETGEVRVLRVVAVDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDEDGQLLNSNLADYGIPRAADAPEVEVE 675 (731)
T ss_pred EEEECCCCcEEEEEEEEEEecCCccCHHHHHHHHHhHHHHHHHHHhhccceECCCCCcCCCCcccccCCCcccCCceEEE
Confidence 9999 59988885 566676643221 1222233311 35665666
Q ss_pred EecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHH
Q 000657 1101 VSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKA 1137 (1370)
Q Consensus 1101 v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~ 1137 (1370)
+.+......|.+....|=-++.-...|+.+|-..+-.
T Consensus 676 ~v~~p~~~~p~g~kGvGE~g~~~~~pAvaNAV~~AtG 712 (731)
T COG1529 676 FVESPSPFGPLGAKGVGEGGIIGIAPAIANAVFDATG 712 (731)
T ss_pred EecCCCCCCCCCCCCcCcCccCchhHHHHHHHHHHhC
Confidence 6664433356666666677777788888888877643
No 34
>PRK12386 fumarate reductase iron-sulfur subunit; Provisional
Probab=98.95 E-value=7.7e-10 Score=124.01 Aligned_cols=69 Identities=13% Similarity=0.326 Sum_probs=63.1
Q ss_pred EEEEeccCCCCCcHHHHHhhCCC-----CccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 28 LRKVLPDGLAHLTLLEYLRDIGL-----TGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~~~l-----~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
+.++++ +++++|||++||+.+. +++|.||.+|.||+|+|+||| +++.||.+++.+++|.+++||
T Consensus 20 q~y~v~-~~~~~tvLd~L~~i~~~~d~~l~~r~~C~~g~CGsCa~~InG----------~p~laC~t~~~~~~~~~~iti 88 (251)
T PRK12386 20 QDYTVE-VNEGEVVLDVIHRLQATQAPDLAVRWNCKAGKCGSCSAEING----------RPRLMCMTRMSTFDEDETVTV 88 (251)
T ss_pred EEEEEe-CCCCCCHHHHHHHhccccCCCCcccCCCCCCcCCCCEEEECc----------cEeccHHhHHHHhCCCCeEEE
Confidence 567776 8899999999998766 599999999999999999996 899999999999999999999
Q ss_pred ccccC
Q 000657 103 EGVGN 107 (1370)
Q Consensus 103 Egl~~ 107 (1370)
|+|.+
T Consensus 89 epl~~ 93 (251)
T PRK12386 89 TPMRT 93 (251)
T ss_pred ccCCC
Confidence 99973
No 35
>PRK05950 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=98.43 E-value=2.1e-07 Score=104.39 Aligned_cols=68 Identities=19% Similarity=0.238 Sum_probs=59.0
Q ss_pred EEEEeccCC-CCCcHHHHHhhC-----CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEE
Q 000657 28 LRKVLPDGL-AHLTLLEYLRDI-----GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVIT 101 (1370)
Q Consensus 28 ~~~~~~~~~-~~~~L~~~LR~~-----~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 101 (1370)
+.++++ ++ +++|||++||+. ...+.+.||++|.||+|+|.||| +++.||.+++..+ |.+++|
T Consensus 18 ~~~~v~-~~~~~~tvl~~L~~~~~~~~~~l~~~~~c~~g~Cg~C~v~vnG----------~~~laC~t~~~~~-~~~~~t 85 (232)
T PRK05950 18 QTYEVD-VDECGPMVLDALIKIKNEIDPTLTFRRSCREGVCGSDAMNING----------KNGLACITPISDL-KKGKIV 85 (232)
T ss_pred EEEEeC-CCCCCCHHHHHHHHhCCccCCcceeeCCCCCCCCCCCEEEECC----------cCccchhChHhHc-CCCeEE
Confidence 355665 77 999999999974 46889999999999999999996 6788999999999 668899
Q ss_pred eccccC
Q 000657 102 VEGVGN 107 (1370)
Q Consensus 102 vEgl~~ 107 (1370)
||+|.+
T Consensus 86 iepl~~ 91 (232)
T PRK05950 86 IRPLPG 91 (232)
T ss_pred EEECCC
Confidence 999974
No 36
>TIGR00384 dhsB succinate dehydrogenase and fumarate reductase iron-sulfur protein. Succinate dehydrogenase and fumarate reductase are reverse directions of the same enzymatic interconversion, succinate + FAD+ = fumarate + FADH2 (EC 1.3.11.1). In E. coli, the forward and reverse reactions are catalyzed by distinct complexes: fumarate reductase operates under anaerobic conditions and succinate dehydrogenase operates under aerobic conditions. This model also describes a region of the B subunit of a cytosolic archaeal fumarate reductase.
Probab=98.24 E-value=8.6e-07 Score=98.76 Aligned_cols=68 Identities=28% Similarity=0.444 Sum_probs=59.2
Q ss_pred EEEEeccCCCCCcHHHHHhhC-----CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 28 LRKVLPDGLAHLTLLEYLRDI-----GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~~-----~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
+.++++ +++++|||+.|++. ...+.+.+|..|.||+|+|.||| +++.||.+++..+ |++++||
T Consensus 15 ~~~~v~-~~~~~tvl~~l~~i~~~~~~~l~~~~~C~~g~Cg~C~v~vnG----------~~~laC~t~v~~~-g~~~~~i 82 (220)
T TIGR00384 15 QSYEVP-ADEGMTVLDALNYIKDEQDPSLAFRRSCRNGICGSCAMNVNG----------KPVLACKTKVEDL-GQPVMKI 82 (220)
T ss_pred EEEEEe-CCCCCcHHHHHHHHHHhcCCCceeecccCCCCCCCCeeEECC----------EEhhhhhChHHHc-CCCcEEE
Confidence 456665 78999999999862 56778999999999999999996 6889999999998 9999999
Q ss_pred ccccC
Q 000657 103 EGVGN 107 (1370)
Q Consensus 103 Egl~~ 107 (1370)
|+|.+
T Consensus 83 epl~~ 87 (220)
T TIGR00384 83 EPLPN 87 (220)
T ss_pred eeCCC
Confidence 99973
No 37
>PF13510 Fer2_4: 2Fe-2S iron-sulfur cluster binding domain; PDB: 1Y56_A 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=98.18 E-value=4e-06 Score=78.41 Aligned_cols=69 Identities=32% Similarity=0.438 Sum_probs=48.4
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCC-----cc----ccCCCCCCCCceEEEEccccccCCccccee-ecccc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLT-----GT----KLGCGEGGCGACTVMVSRYDKKSKKCVHCA-VNACL 88 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~-----g~----k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~-v~sCl 88 (1370)
..|+|+|||+++++. ++.||++.|+..|+. .- ..-|..|.|+.|.|.+++ .+ +.||.
T Consensus 2 ~~v~i~idG~~v~~~---~G~til~al~~~gi~ip~~c~~~~~r~~~~~~g~C~~C~Vev~g----------~~~v~AC~ 68 (82)
T PF13510_consen 2 KMVTITIDGKPVEVP---PGETILEALLAAGIDIPRLCYHGRPRGGLCPIGSCRLCLVEVDG----------EPNVRACS 68 (82)
T ss_dssp EEEEEEETTEEEEEE---ET-BHHHHHHHTT--B-EETTTS-EEBSSSSSTT-SS-EEEESS----------EEEEETTT
T ss_pred CEEEEEECCEEEEEc---CCCHHHHHHHHCCCeEEEeeeccCcccccCCccccceEEEEECC----------CcceEccc
Confidence 579999999999865 899999999975333 22 233778999999999985 33 89999
Q ss_pred cchhccCCcEEEEe
Q 000657 89 APLYSLEGMHVITV 102 (1370)
Q Consensus 89 ~~~~~~~g~~i~Tv 102 (1370)
+++. +|+.|.|-
T Consensus 69 t~v~--~GM~V~T~ 80 (82)
T PF13510_consen 69 TPVE--DGMVVETQ 80 (82)
T ss_dssp -B----TTEEEE--
T ss_pred CCCc--CCcEEEEe
Confidence 9974 79999873
No 38
>PRK12576 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=98.16 E-value=2.2e-06 Score=98.42 Aligned_cols=69 Identities=20% Similarity=0.256 Sum_probs=58.0
Q ss_pred EEEEeccCCCCCcHHHHHhhC--CC---CccccCCCCCCCCceEEEEccccccCCcccceeecccccchhcc--CCcEEE
Q 000657 28 LRKVLPDGLAHLTLLEYLRDI--GL---TGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL--EGMHVI 100 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~~--~l---~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~--~g~~i~ 100 (1370)
+.+.++ +++++|||++|+.. .+ -+.+.+|.+|.||+|+|.||| +++.||.+++..+ ++.+++
T Consensus 25 ~~~~v~-~~~~~tvLd~L~~i~~~~d~tl~~~~~C~~G~CgsC~v~ING----------~~~laC~t~v~~~~~~~~~~~ 93 (279)
T PRK12576 25 QEYKVK-VDRFTQVTEALRRIKEEQDPTLSYRASCHMAVCGSCGMKING----------EPRLACKTLVLDVAKKYNSVI 93 (279)
T ss_pred EEEEEe-cCCCCHHHHHHHHhCCccCCCceecCCCCCCCCCCCEEEECC----------cEeccccCcHHHhhcCCCCcE
Confidence 456665 88999999999972 22 256999999999999999996 6789999999998 366789
Q ss_pred EeccccC
Q 000657 101 TVEGVGN 107 (1370)
Q Consensus 101 TvEgl~~ 107 (1370)
|||+|.+
T Consensus 94 tiePl~~ 100 (279)
T PRK12576 94 TIEPMDY 100 (279)
T ss_pred EEEECCC
Confidence 9999974
No 39
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=97.93 E-value=2.5e-05 Score=100.78 Aligned_cols=93 Identities=27% Similarity=0.414 Sum_probs=69.2
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCC------CCCCCCceEEEEccccccCCcccceeecccccchh
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGC------GEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLY 92 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC------~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 92 (1370)
+.|+|+|||+++++ .+++||++.|+..|+.-.+ .| ..|.|+.|.|.+++.. +.+.||.+++
T Consensus 2 ~~v~~~idg~~~~~---~~g~ti~~a~~~~g~~ip~-~c~~~~~~~~g~C~~C~V~v~g~~--------~~~~aC~t~~- 68 (652)
T PRK12814 2 NTISLTINGRSVTA---APGTSILEAAASAGITIPT-LCFHQELEATGSCWMCIVEIKGKN--------RFVPACSTAV- 68 (652)
T ss_pred CeEEEEECCEEEEe---CCcCcHHHHHHHcCCcccc-ccCCCCCCCccccceeEEEECCCc--------ceecCcCCCC-
Confidence 36899999998875 4899999999987655333 44 4799999999998621 4689999998
Q ss_pred ccCCcEEEEeccccCCCCCCCHHHHHHHHcCCCC-CCCCC
Q 000657 93 SLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQ-CGFCT 131 (1370)
Q Consensus 93 ~~~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~q-CG~Ct 131 (1370)
.+|+.|.| . ...+..+|+...+.-.++ |++|.
T Consensus 69 -~~Gm~v~t----~--~~~~~~~r~~~le~l~~~~c~~C~ 101 (652)
T PRK12814 69 -SEGMVIET----E--NAELHAMRRQSLERLIEQHCGDCL 101 (652)
T ss_pred -CCCCEEEe----C--cHHHHHHHHHHHHHHHhhcccccC
Confidence 48999999 2 345666775444443333 78875
No 40
>cd00207 fer2 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.
Probab=97.90 E-value=1.7e-05 Score=74.30 Aligned_cols=69 Identities=25% Similarity=0.384 Sum_probs=52.1
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEcccccc--------CCcccceeecccccch
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKK--------SKKCVHCAVNACLAPL 91 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~~~~~--------~~~~~~~~v~sCl~~~ 91 (1370)
++|+.||+...++ ++++++|+++|++.|+. ...+|+.|.||+|.|.|..-+.. ........+.+|.+.+
T Consensus 1 v~~~~~~~~~~~~-~~~g~~ll~al~~~g~~-~~~~C~~g~Cg~C~v~v~~G~~~~~~~~~~~~~~~~~~~~LaC~~~~ 77 (84)
T cd00207 1 VTINVPGSGVEVE-VPEGETLLDAAREAGID-IPYSCRAGACGTCKVEVVEGEVDQSDPSLLDEEEAEGGYVLACQTRV 77 (84)
T ss_pred CEEecCCCCEEEE-ECCCCcHHHHHHHcCCC-cccCCCCcCCcCCEEEEeeCccccCcccCCCHHHHhCCeEEEEeCee
Confidence 4688887777776 88999999999998877 89999999999999999641111 0011234678888876
No 41
>PRK08493 NADH dehydrogenase subunit G; Validated
Probab=97.90 E-value=1.6e-05 Score=102.84 Aligned_cols=95 Identities=22% Similarity=0.367 Sum_probs=76.9
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCCccc----cCCC-CCCCCceEEEEccccccCCcccceeecccccchhccC
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTK----LGCG-EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLE 95 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k----~gC~-~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 95 (1370)
|+|+|||+++++. +++|+|+.+|..|+.-.. .+|. .|.|+.|.|.|++ +++.||.+|+. +
T Consensus 2 v~i~IdG~~v~~~---~G~til~aa~~~gi~iP~lC~~~~~~~~G~Cr~C~VeV~G----------~~~~AC~t~v~--d 66 (819)
T PRK08493 2 ITITINGKECEAQ---EGEYILNVARRNGIFIPAICYLSGCSPTLACRLCMVEADG----------KRVYSCNTKAK--E 66 (819)
T ss_pred eEEEECCEEEEeC---CCCHHHHHHHHcCCccccccccCCCCCCccccceEEEECC----------EEeccccCCCC--C
Confidence 7899999998754 899999999987766543 4676 5999999999986 45899999994 9
Q ss_pred CcEEEEec-cccCCCCCCCHHHHHHHHcCCCCCCCCChH
Q 000657 96 GMHVITVE-GVGNRKHGLHPIQESLVRSHGSQCGFCTPG 133 (1370)
Q Consensus 96 g~~i~TvE-gl~~~~~~~~~iq~a~~~~~~~qCG~CtpG 133 (1370)
|+.|.|-. -+ ...-+.+++.+...|-.+|+.|..+
T Consensus 67 GM~V~T~s~~v---~~~Rk~vle~ll~~HpldC~~Cd~~ 102 (819)
T PRK08493 67 GMNILTNTPNL---MDERNAIMQTYDVNHPLECGVCDKS 102 (819)
T ss_pred CCEEEecCHHH---HHHHHHHHHHHHhccCCCCCcCCCC
Confidence 99999842 22 1234678899999999999999864
No 42
>PF13085 Fer2_3: 2Fe-2S iron-sulfur cluster binding domain; PDB: 3P4Q_N 1KFY_N 3CIR_N 3P4R_B 2B76_N 1KF6_B 3P4P_N 3P4S_B 1L0V_B 1ZOY_B ....
Probab=97.86 E-value=3.6e-05 Score=75.59 Aligned_cols=67 Identities=24% Similarity=0.360 Sum_probs=53.1
Q ss_pred EEEeccCCCCCcHHHHHhh----C-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcE--EEE
Q 000657 29 RKVLPDGLAHLTLLEYLRD----I-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH--VIT 101 (1370)
Q Consensus 29 ~~~~~~~~~~~~L~~~LR~----~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~--i~T 101 (1370)
.++++ +++++|+|+.|.. + +=-..+.+|.+|.||+|.|.||| +++.+|.+++..+.... .+|
T Consensus 20 ~y~v~-~~~~~tVLd~L~~Ik~~~D~sLafr~sCr~giCGsCam~ING----------~~~LAC~t~v~~~~~~~~~~i~ 88 (110)
T PF13085_consen 20 EYEVP-VEPGMTVLDALNYIKEEQDPSLAFRYSCRSGICGSCAMRING----------RPRLACKTQVDDLIEKFGNVIT 88 (110)
T ss_dssp EEEEE-GGSTSBHHHHHHHHHHHT-TT--B--SSSSSSSSTTEEEETT----------EEEEGGGSBGGGCTTSETBEEE
T ss_pred EEEec-CCCCCcHHHHHHHHHhccCCCeEEEecCCCCCCCCCEEEECC----------ceecceeeEchhccCCCcceEE
Confidence 45665 7799999998873 2 44567899999999999999997 89999999999998763 788
Q ss_pred ecccc
Q 000657 102 VEGVG 106 (1370)
Q Consensus 102 vEgl~ 106 (1370)
||=|.
T Consensus 89 IePL~ 93 (110)
T PF13085_consen 89 IEPLP 93 (110)
T ss_dssp EEEST
T ss_pred EEECC
Confidence 99886
No 43
>PRK12385 fumarate reductase iron-sulfur subunit; Provisional
Probab=97.60 E-value=9.8e-05 Score=83.43 Aligned_cols=66 Identities=24% Similarity=0.342 Sum_probs=52.8
Q ss_pred EEEEeccCCCCCcHHHHHhh---C-CCC-ccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 28 LRKVLPDGLAHLTLLEYLRD---I-GLT-GTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~---~-~l~-g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
+.+.++ +++++|||+.|+. . ..+ +.+.+|..|.||+|+|.||| +++.+|.+++..+.+. +||
T Consensus 25 ~~~~v~-~~~~~tvl~~L~~ik~~~d~~l~fr~~C~~giCGsC~v~InG----------~~~laC~t~~~~~~~~--~~i 91 (244)
T PRK12385 25 QTYEVP-YDETTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNN----------VPKLACKTFLRDYTGG--MKV 91 (244)
T ss_pred EEEEee-CCCCCcHHHHHHHHHHhcCCCceeccCCCCCcCCCCcceECc----------cChhhHhhHHHHcCCC--eEE
Confidence 456665 7899999999954 2 334 67889999999999999996 6799999999987532 578
Q ss_pred cccc
Q 000657 103 EGVG 106 (1370)
Q Consensus 103 Egl~ 106 (1370)
|=|.
T Consensus 92 ePl~ 95 (244)
T PRK12385 92 EALA 95 (244)
T ss_pred eeCC
Confidence 7775
No 44
>PRK07569 bidirectional hydrogenase complex protein HoxU; Validated
Probab=97.57 E-value=0.00018 Score=81.15 Aligned_cols=96 Identities=27% Similarity=0.379 Sum_probs=71.7
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCC------CCCCCCceEEEEccccccCCcccceeecccccchh
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGC------GEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLY 92 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC------~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 92 (1370)
+.|+|+|||+.+++ .+++|||+.++..|+. ....| ..|.||.|.|.+++. .+.+.||.+++.
T Consensus 2 ~~v~i~idg~~~~~---~~g~til~a~~~~gi~-ip~~C~~~~~~~~G~C~~C~V~v~g~--------~~~~~aC~t~v~ 69 (234)
T PRK07569 2 SVKTLTIDDQLVSA---REGETLLEAAREAGIP-IPTLCHLDGLSDVGACRLCLVEIEGS--------NKLLPACVTPVA 69 (234)
T ss_pred ceEEEEECCEEEEe---CCCCHHHHHHHHcCCC-CCcCcCCCCCCCCCccCCcEEEECCC--------CccccCcCCCCC
Confidence 36899999999765 4899999999976544 22335 499999999999851 135789999976
Q ss_pred ccCCcEEEEeccccCCCCCC----CHHHHHHHHcCCCCCCCCChHH
Q 000657 93 SLEGMHVITVEGVGNRKHGL----HPIQESLVRSHGSQCGFCTPGF 134 (1370)
Q Consensus 93 ~~~g~~i~TvEgl~~~~~~~----~~iq~a~~~~~~~qCG~CtpG~ 134 (1370)
+|+.|.|- ..++ .-+.+.+...|-.-|.-|..+-
T Consensus 70 --~Gm~v~t~------~~~~~~~rk~~l~~ll~~h~~~C~~C~~~g 107 (234)
T PRK07569 70 --EGMVVQTN------TPRLQEYRRMIVELLFAEGNHVCAVCVANG 107 (234)
T ss_pred --CCCEEEEC------CHHHHHHHHHHHHHHHHhccccCcccCCCC
Confidence 89999983 2222 2356667788999999998653
No 45
>PF00111 Fer2: 2Fe-2S iron-sulfur cluster binding domain; InterPro: IPR001041 The ferredoxin protein family are electron carrier proteins with an iron-sulphur cofactor that act in a wide variety of metabolic reactions. Ferredoxins can be divided into several subgroups depending upon the physiological nature of the iron-sulphur cluster(s) and according to sequence similarities. This entry represents members of the 2Fe-2S ferredoxin family that have a general core structure consisting of beta(2)-alpha-beta(2), which includes putidaredoxin and terpredoxin, and adrenodoxin [, , , ]. They are proteins of around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This conserved region is also found as a domain in various metabolic enzymes and in multidomain proteins, such as aldehyde oxidoreductase (N-terminal), xanthine oxidase (N-terminal), phthalate dioxygenase reductase (C-terminal), succinate dehydrogenase iron-sulphur protein (N-terminal), and methane monooxygenase reductase (N-terminal).; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding; PDB: 3M9S_C 2FUG_L 3IAS_L 2YBB_3 3IAM_3 3I9V_3 1JQ4_A 1DOX_A 1DOY_A 2KAJ_A ....
Probab=97.51 E-value=0.0001 Score=68.11 Aligned_cols=47 Identities=36% Similarity=0.615 Sum_probs=42.0
Q ss_pred EEECCEEEEeccCCCCCc-HHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 23 LYVNGLRKVLPDGLAHLT-LLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~-L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
+++||+.++++ +.++.+ ||++|++.+-..+..+|+.|.||.|.|.|.
T Consensus 1 i~i~g~~~~~~-~~~~~~~ll~~~~~~~gi~i~~~C~~g~Cg~C~v~v~ 48 (78)
T PF00111_consen 1 ITINGKGVTVE-VPPGETLLLDALERAGGIGIPYSCGGGGCGTCRVRVL 48 (78)
T ss_dssp EETTTEEEEEE-EETTSBBHHHHHHHTTTTTSTTSSSSSSSSTTEEEEE
T ss_pred CEECCeEEEEE-eCCCccHHHHHHHHcCCCCcccCCCCCccCCcEEEEe
Confidence 47899999987 888888 999999875688999999999999999875
No 46
>PRK12577 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=97.44 E-value=0.00097 Score=78.82 Aligned_cols=69 Identities=26% Similarity=0.402 Sum_probs=53.5
Q ss_pred EEEEeccCCCCCcHHHHHhhC--CCCc---cccCCCCCCCCceEEEEccccccCCcccceeecccccchhc-cC------
Q 000657 28 LRKVLPDGLAHLTLLEYLRDI--GLTG---TKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYS-LE------ 95 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~~--~l~g---~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~-~~------ 95 (1370)
+.++++ +++++|+|+.|+.. .+.+ -..+|..|.||+|.|.||| +++.||.+++.. ++
T Consensus 19 ~~~~v~-~~~~~tvL~~l~~i~~~~d~tL~~~~~c~~~~Cg~C~v~inG----------~~~laC~t~v~~~~~~~~~~~ 87 (329)
T PRK12577 19 QTYTLE-VEPGNTILDCLNRIKWEQDGSLAFRKNCRNTICGSCAMRING----------RSALACKENVGSELARLSDSN 87 (329)
T ss_pred EEEEEE-CCCCChHHHHHHHhCCcCCCCcEEcCCCCCCCCCCCEEEECC----------eeecCcccchhhhhccccccc
Confidence 456665 88999999999973 4433 5678999999999999996 678899999875 22
Q ss_pred --CcEEEEeccccC
Q 000657 96 --GMHVITVEGVGN 107 (1370)
Q Consensus 96 --g~~i~TvEgl~~ 107 (1370)
+...+|||=|++
T Consensus 88 ~~~~~~i~iePl~~ 101 (329)
T PRK12577 88 SGAIPEITIAPLGN 101 (329)
T ss_pred cCCCCeEEEEECCC
Confidence 234678998864
No 47
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=97.10 E-value=0.0033 Score=73.39 Aligned_cols=157 Identities=15% Similarity=0.212 Sum_probs=99.8
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 337 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IG 337 (1370)
++.+++ ....|+.|+|.+|+.++++.. . ...++.|||.+.+. .. -.+.++|++++. +..|..+++.+++|
T Consensus 29 t~~igg-~a~~~v~p~~~edl~~~v~~a~~~~ip~~vlGgGSNllv~--d~-g~~gvVI~l~~~--~~~i~~~~~~v~v~ 102 (302)
T PRK14652 29 AVRVGG-PADLLVRPADPDALSALLRAVRELGVPLSILGGGANTLVA--DA-GVRGVVLRLPQD--FPGESTDGGRLVLG 102 (302)
T ss_pred EeecCC-cceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCcceeec--CC-CEeeEEEEecCC--cceEEecCCEEEEE
Confidence 455555 456789999999998877633 2 36788999998642 11 123688998752 55666677899999
Q ss_pred ccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccC-CCCChhHHHHhcCCEEEEEeCC
Q 000657 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TAS-PISDLNPLWMASGAKFHIVDCK 415 (1370)
Q Consensus 338 A~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~as-p~sD~~p~L~al~A~v~i~s~~ 415 (1370)
|++++.+|.+.+.+. .+. -++..++.+ ||+||++. |+. .-+++.=.+. .+++...+
T Consensus 103 AG~~~~~L~~~~~~~--GL~------------GlE~l~gIP----GTvGGav~mNaGa~ggei~d~v~----~v~vv~~~ 160 (302)
T PRK14652 103 AGAPISRLPARAHAH--GLV------------GMEFLAGIP----GTLGGAVAMNAGTKLGEMKDVVT----AVELATAD 160 (302)
T ss_pred CCCcHHHHHHHHHHc--CCc------------ccccccCCC----cchhHHHHHcCCCCceEhhheEE----EEEEECCC
Confidence 999999999886532 110 112222222 69999995 443 2222222222 45666667
Q ss_pred CCeEEEehhHhhcccccccCCCCeEEEEEEcc
Q 000657 416 GNIRTTMAEEFFLGYRKVDLTSGEILLSIFLP 447 (1370)
Q Consensus 416 g~~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP 447 (1370)
| .++++-+|..-+||...++.+-||+++.+.
T Consensus 161 G-~~~~~~~e~~f~YR~s~~~~~~II~~a~~~ 191 (302)
T PRK14652 161 G-AGFVPAAALGYAYRTCRLPPGAVITRVEVR 191 (302)
T ss_pred C-cEEeehhhcCcccceeccCCCeEEEEEEEE
Confidence 7 777777776667776665544455555444
No 48
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=97.08 E-value=0.0044 Score=72.56 Aligned_cols=147 Identities=17% Similarity=0.226 Sum_probs=96.5
Q ss_pred CceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHH
Q 000657 270 GLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1370)
Q Consensus 270 ~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1370)
...++.|.|.+|+.++++-. . ...+++|||.+.+. ... ...++|++++ |+.|+.+++.+++||++++.+|
T Consensus 37 a~~vv~p~~~edv~~~l~~a~~~~ip~~v~GgGSNll~~--d~g-~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~L 110 (305)
T PRK12436 37 ADVFVAPTNYDEIQEVIKYANKYNIPVTFLGNGSNVIIK--DGG-IRGITVSLIH---ITGVTVTGTTIVAQCGAAIIDV 110 (305)
T ss_pred EEEEEecCCHHHHHHHHHHHHHcCCCEEEEcCCeEEEEe--CCC-eeEEEEEeCC---cCcEEEeCCEEEEEeCCcHHHH
Confidence 34688999999998887532 2 36788999999742 121 2367899875 5567777889999999999999
Q ss_pred HHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCCC----CChhHHHHhcCCEEEEEeCCCCeEE
Q 000657 346 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASPI----SDLNPLWMASGAKFHIVDCKGNIRT 420 (1370)
Q Consensus 346 ~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp~----sD~~p~L~al~A~v~i~s~~g~~R~ 420 (1370)
.+.+.+. .+. -+...+ ---+||||++. ||.-. +|.. ..+++...+|..++
T Consensus 111 ~~~~~~~--gl~------------Gle~~~----giPGtVGGav~~NAGayG~~~~dvl-------~~v~vv~~~G~v~~ 165 (305)
T PRK12436 111 SRIALDH--NLT------------GLEFAC----GIPGSVGGALYMNAGAYGGEISFVL-------TEAVVMTGDGELRT 165 (305)
T ss_pred HHHHHHc--CCc------------cchhhc----CCccchhHHHHhcCccchhehheee-------eEEEEEeCCCCEEE
Confidence 9876542 110 011111 13479999996 44432 2222 12344456676889
Q ss_pred EehhHhhcccccccCCCCe-EEEEEEcc
Q 000657 421 TMAEEFFLGYRKVDLTSGE-ILLSIFLP 447 (1370)
Q Consensus 421 vpl~dF~~g~~~~~L~~~E-il~~I~iP 447 (1370)
++-+|..-+||.+.++.+. ||+++.+.
T Consensus 166 ~~~~e~~f~YR~s~~~~~~~iil~a~~~ 193 (305)
T PRK12436 166 LTKEAFEFGYRKSVFANNHYIILEARFE 193 (305)
T ss_pred EEHHHhcCcCCCCcCCCCCEEEEEEEEE
Confidence 9999988899988876532 55544443
No 49
>PRK13552 frdB fumarate reductase iron-sulfur subunit; Provisional
Probab=97.03 E-value=0.00073 Score=76.15 Aligned_cols=67 Identities=21% Similarity=0.271 Sum_probs=54.5
Q ss_pred EEEEeccCCCCCcHHHHHhh-C----CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 28 LRKVLPDGLAHLTLLEYLRD-I----GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~-~----~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
+.++++ +++++|+|+.|+. . .=-+.+.+|.+|.||+|.|.||| +++.+|.+.+..+.+. .+||
T Consensus 24 ~~y~v~-~~~~~tvLdaL~~Ik~~~D~sL~fr~sCr~giCGsCam~ING----------~~~LAC~t~v~~~~~~-~i~i 91 (239)
T PRK13552 24 VTYQLE-ETPGMTLFIALNRIREEQDPSLQFDFVCRAGICGSCAMVING----------RPTLACRTLTSDYPDG-VITL 91 (239)
T ss_pred EEEEec-CCCCCCHHHHHHHHHhcCCCCeeEeccCCCCCCCCceeEECC----------eEhhhhhccHhhcCCC-cEEE
Confidence 457775 7899999999985 2 32346899999999999999997 8999999999887532 5789
Q ss_pred cccc
Q 000657 103 EGVG 106 (1370)
Q Consensus 103 Egl~ 106 (1370)
|=|.
T Consensus 92 ePl~ 95 (239)
T PRK13552 92 MPLP 95 (239)
T ss_pred EECC
Confidence 9886
No 50
>PRK06259 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Provisional
Probab=97.00 E-value=0.0036 Score=78.34 Aligned_cols=62 Identities=26% Similarity=0.477 Sum_probs=48.9
Q ss_pred EEEeccCCCCCcHHHHHhhC-CCCc----cccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEec
Q 000657 29 RKVLPDGLAHLTLLEYLRDI-GLTG----TKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVE 103 (1370)
Q Consensus 29 ~~~~~~~~~~~~L~~~LR~~-~l~g----~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvE 103 (1370)
.++++ +++++|||+.|++. +.+. .+.+|..|.||+|+|.++| +++.+|.+++. +|..|.+..
T Consensus 22 ~~~v~-~~~~~tvl~al~~~~~~~~~~l~~~~~C~~g~Cg~C~v~v~G----------~~~laC~~~~~--~~~~i~~~~ 88 (486)
T PRK06259 22 SYEVP-VKEGMTVLDALEYINKTYDANIAFRSSCRAGQCGSCAVTING----------EPVLACKTEVE--DGMIIEPLD 88 (486)
T ss_pred EEEEe-CCCCChHHHHHHHhchhcCCCceecCCCCCCCCCCCEEEECC----------eEecccccCCC--CCCEEEecC
Confidence 55664 78999999999973 3223 3789999999999999985 57889999885 577777664
No 51
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.99 E-value=0.0061 Score=71.27 Aligned_cols=156 Identities=22% Similarity=0.335 Sum_probs=103.3
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 337 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IG 337 (1370)
++.+++ ....++.|+|.+|+.++++.. . ...++.|||.+.+. .. -.+..+||+++ .|+.|+.+++.+++|
T Consensus 24 t~~igg-~a~~vv~P~s~edv~~~v~~a~~~~~p~~v~GgGsnll~~--d~-g~~gvvI~l~~--~l~~i~~~~~~v~v~ 97 (298)
T PRK13905 24 SFRVGG-PADYLVEPADIEDLQEFLKLLKENNIPVTVLGNGSNLLVR--DG-GIRGVVIRLGK--GLNEIEVEGNRITAG 97 (298)
T ss_pred eeecCc-eEeEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCceEEec--CC-CcceEEEEecC--CcceEEecCCEEEEE
Confidence 344554 345679999999998887643 2 36788999997642 11 12368899873 577777777899999
Q ss_pred ccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCC----CCChhHHHHhcCCEEEEE
Q 000657 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP----ISDLNPLWMASGAKFHIV 412 (1370)
Q Consensus 338 A~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp----~sD~~p~L~al~A~v~i~ 412 (1370)
|++++.+|.+.+.+. .+. -+...++. -+||||.+. |+.- ++|.. -.+++.
T Consensus 98 aG~~~~~L~~~l~~~--Gl~------------gle~~~gi----pGTVGGai~~NaG~~G~~~~d~v-------~~v~vv 152 (298)
T PRK13905 98 AGAPLIKLARFAAEA--GLS------------GLEFAAGI----PGTVGGAVFMNAGAYGGETADVL-------ESVEVL 152 (298)
T ss_pred CCCcHHHHHHHHHHc--CCC------------cchhccCC----CcchhHHHHHcCCcCceEhheeE-------EEEEEE
Confidence 999999999886542 110 11112232 379999986 3432 23322 135556
Q ss_pred eCCCCeEEEehhHhhcccccccCCC-CeEEEEEEccC
Q 000657 413 DCKGNIRTTMAEEFFLGYRKVDLTS-GEILLSIFLPW 448 (1370)
Q Consensus 413 s~~g~~R~vpl~dF~~g~~~~~L~~-~Eil~~I~iP~ 448 (1370)
..+|..++++-+|.+-+||...+.. ..||+++.+-.
T Consensus 153 ~~~G~~~~~~~~e~~~~yR~s~~~~~~gII~~~~l~l 189 (298)
T PRK13905 153 DRDGEIKTLSNEELGFGYRHSALQEEGLIVLSATFQL 189 (298)
T ss_pred eCCCCEEEEEHHHcCCcCccccCCCCCEEEEEEEEEE
Confidence 6677678888888888898877763 45777776654
No 52
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.98 E-value=0.0039 Score=72.46 Aligned_cols=155 Identities=18% Similarity=0.163 Sum_probs=99.6
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhCC---CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKYP---DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGA 338 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~~---~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA 338 (1370)
++.+++ .-..|+.|+|.+|+.++++... ...++.|||-+.+.-. . .+.++|.+++ |+.|+.+++.+++||
T Consensus 27 t~~iGG-~A~~~v~p~s~eel~~~~~~~~~~~p~~vlG~GSNlLv~d~--g-~~gvVI~l~~---~~~i~i~~~~v~v~A 99 (297)
T PRK14653 27 SFKIGG-PVPLFAIPNSTNGFIETINLLKEGIEVKILGNGTNVLPKDE--P-MDFVVVSTER---LDDIFVDNDKIICES 99 (297)
T ss_pred EeeeCc-EEEEEEecCCHHHHHHHHHHHhcCCCEEEEcCCeeEEEecC--C-ccEEEEEeCC---cCceEEeCCEEEEeC
Confidence 455666 4457899999999988875432 3678999999988422 1 2367788755 667777778899999
Q ss_pred cccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCCC-CChhHHHHhcCCEEEEEeCCC
Q 000657 339 AVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASPI-SDLNPLWMASGAKFHIVDCKG 416 (1370)
Q Consensus 339 ~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp~-sD~~p~L~al~A~v~i~s~~g 416 (1370)
++++.+|...+.+. .+. -|+.++.. =|||||+++ ||.-. .++.=.+. +|++.+ +|
T Consensus 100 G~~l~~L~~~~~~~--GL~------------GlE~l~gI----PGTVGGAv~mNAGayG~ei~d~l~----~V~~~d-~g 156 (297)
T PRK14653 100 GLSLKKLCLVAAKN--GLS------------GFENAYGI----PGSVGGAVYMNAGAYGWETAENIV----EVVAYD-GK 156 (297)
T ss_pred CCcHHHHHHHHHHC--CCc------------chhhhcCC----chhHHHHHHHhCccCchhhheeEE----EEEEEC-CC
Confidence 99999999875432 111 12334444 389999995 55321 22322222 666666 34
Q ss_pred CeEEEehhHhhcccccccCCCC--eEEEEEEc
Q 000657 417 NIRTTMAEEFFLGYRKVDLTSG--EILLSIFL 446 (1370)
Q Consensus 417 ~~R~vpl~dF~~g~~~~~L~~~--Eil~~I~i 446 (1370)
..++++-+|.--+||...++.. -||+++.+
T Consensus 157 ~v~~~~~~e~~f~YR~S~~~~~~~~iI~~a~f 188 (297)
T PRK14653 157 KIIRLGKNEIKFSYRNSIFKEEKDLIILRVTF 188 (297)
T ss_pred EEEEEchhhccccCccccCCCCCcEEEEEEEE
Confidence 4677888887777877666542 24444443
No 53
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.98 E-value=0.0096 Score=69.76 Aligned_cols=150 Identities=16% Similarity=0.238 Sum_probs=97.4
Q ss_pred CCceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHH
Q 000657 269 GGLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTE 344 (1370)
Q Consensus 269 ~~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~ 344 (1370)
....|+.|.|.+|+.++++.. . ...+++|||.+.+. .+. ....+|++++ |+.|+.+++.+++||++++.+
T Consensus 36 ~A~~~v~p~~~edv~~~v~~a~~~~ip~~vlGgGSNll~~--d~g-~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~ 109 (307)
T PRK13906 36 NADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIR--EGG-IRGIVISLLS---LDHIEVSDDAIIAGSGAAIID 109 (307)
T ss_pred eeEEEEEcCCHHHHHHHHHHHHHcCCCEEEEcCceeEeec--CCC-cceEEEEecC---ccceEEeCCEEEEECCCcHHH
Confidence 345789999999988877533 2 36788999988752 111 1368899865 677777788999999999999
Q ss_pred HHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCCCC-ChhHHHHhcCCEEEEEeCCCCeEEEe
Q 000657 345 LLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASPIS-DLNPLWMASGAKFHIVDCKGNIRTTM 422 (1370)
Q Consensus 345 l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp~s-D~~p~L~al~A~v~i~s~~g~~R~vp 422 (1370)
|.+.+.+. .+. -+...++. -|||||++. |+.-.+ ++.=.|+ .|++...+|..++++
T Consensus 110 l~~~~~~~--Gl~------------GlE~~~gI----PGtVGGav~mNaGayGg~i~D~l~----~v~vv~~~G~~~~~~ 167 (307)
T PRK13906 110 VSRVARDY--ALT------------GLEFACGI----PGSIGGAVYMNAGAYGGEVKDCID----YALCVNEQGSLIKLT 167 (307)
T ss_pred HHHHHHHc--CCc------------cchhhcCC----CccHhHHHHhhCCcchhhhhhhee----EEEEEeCCCCEEEEE
Confidence 99875432 110 01111221 368999995 444331 2222222 345555667688899
Q ss_pred hhHhhcccccccCCCCe-EEEEEEc
Q 000657 423 AEEFFLGYRKVDLTSGE-ILLSIFL 446 (1370)
Q Consensus 423 l~dF~~g~~~~~L~~~E-il~~I~i 446 (1370)
-+|..-+||.+.++.++ ||+++.+
T Consensus 168 ~~e~~f~YR~S~~~~~~~ii~~~~~ 192 (307)
T PRK13906 168 TKELELDYRNSIIQKEHLVVLEAAF 192 (307)
T ss_pred HHHccCcCCcccCCCCCEEEEEEEE
Confidence 99987799988876533 5554443
No 54
>PRK07570 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated
Probab=96.94 E-value=0.00079 Score=76.20 Aligned_cols=69 Identities=23% Similarity=0.355 Sum_probs=54.7
Q ss_pred EEEEeccCCCCCcHHHHHhh-C-CC-------CccccCCCCCCCCceEEEEccccccCCccccee------ecccccchh
Q 000657 28 LRKVLPDGLAHLTLLEYLRD-I-GL-------TGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCA------VNACLAPLY 92 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~-~-~l-------~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~------v~sCl~~~~ 92 (1370)
+.++++.+++++|+|+.|.. . .+ -+.+.+|.+|.||+|.|.||| ++ ..+|.+.+.
T Consensus 20 q~y~v~~~~~~~tvLd~L~~Ik~~~~~~~~~~l~fr~sCr~~iCGsCam~ING----------~p~~~~~~~LAC~t~~~ 89 (250)
T PRK07570 20 ETYEVDDISPDMSFLEMLDVLNEQLIEKGEEPVAFDHDCREGICGMCGLVING----------RPHGPDRGTTTCQLHMR 89 (250)
T ss_pred EEEEecCCCCCCcHHHHHHHHHHHhhccCCCCeeEeccccCCcCCcceeEECC----------ccCCCCcccchhhhhhh
Confidence 45666436789999999974 1 22 467899999999999999997 67 789999988
Q ss_pred ccCCcEEEEecccc
Q 000657 93 SLEGMHVITVEGVG 106 (1370)
Q Consensus 93 ~~~g~~i~TvEgl~ 106 (1370)
.+.+...+|||=|.
T Consensus 90 ~~~~~~~i~iePl~ 103 (250)
T PRK07570 90 SFKDGDTITIEPWR 103 (250)
T ss_pred hcCCCCeEEEEECC
Confidence 87654567899984
No 55
>COG0479 FrdB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion]
Probab=96.75 E-value=0.0017 Score=72.06 Aligned_cols=67 Identities=28% Similarity=0.376 Sum_probs=56.1
Q ss_pred EEEeccCCCCCcHHHHHhh----C-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEec
Q 000657 29 RKVLPDGLAHLTLLEYLRD----I-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVE 103 (1370)
Q Consensus 29 ~~~~~~~~~~~~L~~~LR~----~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvE 103 (1370)
.++++ .++++++||.|.. + .--..+..|.+|.||+|.+.||| ++..+|.+.+..+... ++|||
T Consensus 21 ~yev~-~~~~~~vLdaL~~Ik~e~d~~Lsfr~sCR~gICGSCam~ING----------~prLAC~t~~~~~~~~-~i~ie 88 (234)
T COG0479 21 TYEVP-YDEGMTVLDALLYIKEEQDPTLSFRRSCREGICGSCAMNING----------KPRLACKTLMKDLEEG-VITIE 88 (234)
T ss_pred EEEec-CCCCCcHHHHHHHHHHhcCCccchhhhccCCcCCcceeEECC----------ccccchhchhhhccCC-ceEEE
Confidence 46665 7799999998863 2 44456899999999999999997 7899999999998766 88999
Q ss_pred cccC
Q 000657 104 GVGN 107 (1370)
Q Consensus 104 gl~~ 107 (1370)
=|.+
T Consensus 89 PL~~ 92 (234)
T COG0479 89 PLPN 92 (234)
T ss_pred ECCC
Confidence 8873
No 56
>PRK08640 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=96.65 E-value=0.0017 Score=73.70 Aligned_cols=66 Identities=24% Similarity=0.411 Sum_probs=53.0
Q ss_pred EEEEeccCCCCCcHHHHHhhC--C---C-------CccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccC
Q 000657 28 LRKVLPDGLAHLTLLEYLRDI--G---L-------TGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLE 95 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~~--~---l-------~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 95 (1370)
+.++++ +++++|+|+.|... . + -..+.+|.+|.||+|.|.||| ++..+|.+.+-.+.
T Consensus 23 q~y~v~-~~~~~tvLdaL~~I~~~~~~~~g~~~~~l~fr~sCr~giCGsCam~ING----------~p~LAC~t~v~~~~ 91 (249)
T PRK08640 23 EEFEIP-YRPNMNVISALMEIRRNPVNAKGEKTTPVVWDMNCLEEVCGACSMVING----------KPRQACTALIDQLE 91 (249)
T ss_pred EEEEec-CCCCCcHHHHHHHHHhcccccccccCCCeeEecccCCCCCCcCeeEECC----------ccchhhhChHHHcC
Confidence 457776 78999999999742 2 2 234689999999999999997 78999999998773
Q ss_pred CcEEEEecccc
Q 000657 96 GMHVITVEGVG 106 (1370)
Q Consensus 96 g~~i~TvEgl~ 106 (1370)
..+|||=|.
T Consensus 92 --~~i~iePl~ 100 (249)
T PRK08640 92 --QPIRLEPMS 100 (249)
T ss_pred --CcEEEEECC
Confidence 347899886
No 57
>PRK12575 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=96.56 E-value=0.0031 Score=70.81 Aligned_cols=66 Identities=23% Similarity=0.286 Sum_probs=51.6
Q ss_pred EEEEeccCCC-CCcHHHHHhh---C-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 28 LRKVLPDGLA-HLTLLEYLRD---I-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~-~~~L~~~LR~---~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
+.++++ +.+ ++|+|+.|.. + +--+.+.+|.+|.||+|.|.||| ++..+|.+.+..+.+ -+||
T Consensus 23 ~~y~v~-~~~~~~tvld~L~~ik~~d~~l~fr~sCr~giCGsCa~~iNG----------~~~LaC~t~~~~~~~--~i~i 89 (235)
T PRK12575 23 QRYEIA-PRAEDRMLLDVLGRVKAQDETLSYRRSCREGICGSDAMNING----------RNGLACLTNMQALPR--EIVL 89 (235)
T ss_pred EEEEec-CCCCCCcHHHHHHHHHhcCCCeeeeccCCCCCCCCCeeEECC----------eEcchhhCcHhHcCC--CEEE
Confidence 346665 554 6799999875 2 33346789999999999999997 799999999998743 2689
Q ss_pred cccc
Q 000657 103 EGVG 106 (1370)
Q Consensus 103 Egl~ 106 (1370)
|=|.
T Consensus 90 ePl~ 93 (235)
T PRK12575 90 RPLP 93 (235)
T ss_pred eECC
Confidence 9885
No 58
>PRK07860 NADH dehydrogenase subunit G; Validated
Probab=96.50 E-value=0.0044 Score=81.92 Aligned_cols=100 Identities=21% Similarity=0.317 Sum_probs=76.2
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhC-----CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-----GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYS 93 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-----~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 93 (1370)
.+|+|+|||+++++. +++||++.++.. +|...+.-+..|.|.-|.|.|++. .+.+.||.+|+.
T Consensus 3 ~~v~~~idg~~~~~~---~g~til~aa~~~gi~ip~~C~~~~l~~~g~Cr~C~Vev~g~--------~~~~~aC~t~v~- 70 (797)
T PRK07860 3 DLVTLTIDGVEVSVP---KGTLVIRAAELLGIQIPRFCDHPLLDPVGACRQCLVEVEGQ--------RKPQASCTTTVT- 70 (797)
T ss_pred ceEEEEECCEEEEeC---CCChHHHHHHHcCCCCCeecCCCCCCCCcccCccEEEECCC--------cccccccCCCCC-
Confidence 468999999998754 899999999864 455556666799999999999862 146899999986
Q ss_pred cCCcEEEEe---ccccCCCCCCCHHHHHHHHcCCCCCCCCChHH
Q 000657 94 LEGMHVITV---EGVGNRKHGLHPIQESLVRSHGSQCGFCTPGF 134 (1370)
Q Consensus 94 ~~g~~i~Tv---Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~ 134 (1370)
+|+.|.|- |=+. ..-.-+.+-+...|-..|..|.-+-
T Consensus 71 -~gm~V~t~~~s~~v~---~~r~~~le~ll~~hp~dC~~C~~~g 110 (797)
T PRK07860 71 -DGMVVKTQLTSPVAD---KAQHGVMELLLINHPLDCPVCDKGG 110 (797)
T ss_pred -CCcEEEeCCCCHHHH---HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 79999983 2221 1224466677788999999998763
No 59
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase. This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan.
Probab=96.42 E-value=0.028 Score=65.25 Aligned_cols=157 Identities=15% Similarity=0.203 Sum_probs=98.2
Q ss_pred ccccCCCCceEEecCCHHHHHHHHhhC----CCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcc
Q 000657 263 LNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGA 338 (1370)
Q Consensus 263 ~~~~~~~~~~~~~P~sl~e~l~ll~~~----~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA 338 (1370)
+.+++ ....|+.|+|.+|+.++++.. -...+++|||.+.+.- .....++|++.+-.. .+...+..+++||
T Consensus 7 ~~igg-~a~~~v~p~s~edl~~~l~~a~~~~~p~~vlGgGSNll~~d---~~~~gvvi~l~~~~~--~~~~~~~~v~v~a 80 (284)
T TIGR00179 7 YKIGG-NARHIVCPESIEQLVNVLDNAKEEDQPLLILGEGSNLLILD---DGRGGVIINLGKGID--IEDDEGEYVHVGG 80 (284)
T ss_pred eecCc-eeeEEEEeCCHHHHHHHHHHHHHcCCCEEEEecceEEEEcc---CCcCeEEEECCCCce--EEEecCCEEEEEc
Confidence 34455 446799999999998877532 2467899999998632 122358899866322 2223346799999
Q ss_pred cccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccc-cCCCCC-hhHHHHhcCCEEEEEeCCC
Q 000657 339 AVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASPISD-LNPLWMASGAKFHIVDCKG 416 (1370)
Q Consensus 339 ~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~-asp~sD-~~p~L~al~A~v~i~s~~g 416 (1370)
++++.+|.+.+.+. .+. -+...++.+ |||||++.+ |.-.+- +.=.| -.+++...+|
T Consensus 81 G~~~~~l~~~~~~~--Gl~------------GlE~l~giP----GtvGGai~mNAGayG~~i~d~l----~~v~vv~~~G 138 (284)
T TIGR00179 81 GENWHKLVKYALKN--GLS------------GLEFLAGIP----GTVGGAVIMNAGAYGVEISEVL----VYATILLATG 138 (284)
T ss_pred CCcHHHHHHHHHHC--CCc------------ccccCCCCC----chHHHHHHHhcccchhehhheE----EEEEEEeCCC
Confidence 99999999876432 110 111222222 589999954 432211 11011 1345556777
Q ss_pred CeEEEehhHhhcccccccCCCCe--EEEEEEcc
Q 000657 417 NIRTTMAEEFFLGYRKVDLTSGE--ILLSIFLP 447 (1370)
Q Consensus 417 ~~R~vpl~dF~~g~~~~~L~~~E--il~~I~iP 447 (1370)
..++++-+|..-+||.+.++... ++++..+.
T Consensus 139 ~~~~~~~~~~~f~YR~S~f~~~~~~iil~a~~~ 171 (284)
T TIGR00179 139 KTEWLTNEQLGFGYRTSIFQHKYVGLVLKAEFQ 171 (284)
T ss_pred CEEEEEHHHccccCCccccCCCCcEEEEEEEEE
Confidence 67899999988899998887643 55555443
No 60
>PLN00129 succinate dehydrogenase [ubiquinone] iron-sulfur subunit
Probab=96.39 E-value=0.0039 Score=71.31 Aligned_cols=66 Identities=20% Similarity=0.226 Sum_probs=51.3
Q ss_pred EEEeccCCC-CCcHHHHHhh-C----CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 29 RKVLPDGLA-HLTLLEYLRD-I----GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 29 ~~~~~~~~~-~~~L~~~LR~-~----~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
.++++ +.+ ++|+||.|+. . .=-..+.+|.+|.||+|.|.||| ++..+|.+.+..+.+. .+||
T Consensus 63 ~y~v~-~~~~~~tVLd~L~~Ik~~~D~sLsfr~sCr~giCGsCam~ING----------~p~LAC~t~v~~~~~~-~i~i 130 (276)
T PLN00129 63 SYKVD-LNDCGPMVLDVLIKIKNEQDPSLTFRRSCREGICGSCAMNIDG----------KNTLACLTKIDRDESG-PTTI 130 (276)
T ss_pred EEEeC-CCCCCchHHHHHHHHHHcCCCCeEEeccCCCCCCCCCeeEECC----------cccccccccHhhcCCC-cEEE
Confidence 35564 555 7999999975 2 33346899999999999999997 7899999999877433 4679
Q ss_pred cccc
Q 000657 103 EGVG 106 (1370)
Q Consensus 103 Egl~ 106 (1370)
|=|.
T Consensus 131 ePl~ 134 (276)
T PLN00129 131 TPLP 134 (276)
T ss_pred EECC
Confidence 9886
No 61
>PTZ00305 NADH:ubiquinone oxidoreductase; Provisional
Probab=96.29 E-value=0.013 Score=66.78 Aligned_cols=97 Identities=26% Similarity=0.357 Sum_probs=69.4
Q ss_pred ceEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCcccc----CC-CCCCCCceEEEEccccccCCcccceeecccccchh
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKL----GC-GEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLY 92 (1370)
Q Consensus 18 ~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~----gC-~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 92 (1370)
+-...++|||+++++ +++++|||+..|+.|+.=... +. ..|.|.-|.|-|++. .+.+.||.+|+.
T Consensus 66 ~~~~~I~IDGk~VeV--~~~G~TILeAAr~~GI~IPtLCy~~~L~p~G~CRlClVEVeG~--------~~lv~AC~tpV~ 135 (297)
T PTZ00305 66 KPRAIMFVNKRPVEI--IPQEENLLEVLEREGIRVPKFCYHPILSVAGNCRMCLVQVDGT--------QNLVVSCATVAL 135 (297)
T ss_pred CCceEEEECCEEEEe--cCCCChHHHHHHHcCCCcCccccCCCCCCCCccceeEEEECCC--------cCcccccCCcCC
Confidence 346789999999976 247999999999865443322 22 378999999999852 157999999986
Q ss_pred ccCCcEEEEeccccCCCCCCCH----HHHHHHHcCCCCCCCCCh
Q 000657 93 SLEGMHVITVEGVGNRKHGLHP----IQESLVRSHGSQCGFCTP 132 (1370)
Q Consensus 93 ~~~g~~i~TvEgl~~~~~~~~~----iq~a~~~~~~~qCG~Ctp 132 (1370)
+|+.|.|- ...+.. +.+-+...|-.-|.-|.-
T Consensus 136 --eGM~V~T~------Se~v~~~Rk~vLElLLs~Hp~DC~~C~k 171 (297)
T PTZ00305 136 --PGMSIITD------SRLVRDAREGNVELILINHPNDCPICEQ 171 (297)
T ss_pred --CCCEEEeC------CHHHHHHHHHHHHHHHhcCCCcCCcccC
Confidence 79999982 233333 444556667777777765
No 62
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.17 E-value=0.05 Score=63.34 Aligned_cols=157 Identities=17% Similarity=0.239 Sum_probs=104.1
Q ss_pred CCccccCCCCceEEecCCHHHHHHHHhhC----CCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEE
Q 000657 261 NPLNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEI 336 (1370)
Q Consensus 261 ~~~~~~~~~~~~~~~P~sl~e~l~ll~~~----~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~I 336 (1370)
.++.+++ .-..|+.|+|.+|+.++++.. -...++.||+-+.+.- ....+..+|.+.+ ++.|+..++.+++
T Consensus 25 tt~~iGG-~A~~~~~p~~~~eL~~~l~~~~~~~~p~~vlG~GSNlLv~D--~g~~~g~vi~~~~---~~~i~~~~~~v~a 98 (302)
T PRK14650 25 TTYKIGG-ISKLFLTPKTIKDAEHIFKAAIEEKIKIFILGGGSNILIND--EEEIDFPIIYTGH---LNKIEIHDNQIVA 98 (302)
T ss_pred ceeeeCc-EEEEEEecCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEEC--CCccceEEEEECC---cCcEEEeCCEEEE
Confidence 4566666 456788999999999888643 2367899999988732 2112245666543 6777777788999
Q ss_pred cccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccC----CCCChhHHHHhcCCEEEE
Q 000657 337 GAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TAS----PISDLNPLWMASGAKFHI 411 (1370)
Q Consensus 337 GA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~as----p~sD~~p~L~al~A~v~i 411 (1370)
||++++.+|.....+. .+ .-++..++.+ ||+||-++ ||. -++|.. -+|++
T Consensus 99 ~AG~~~~~l~~~~~~~--gl------------~GlE~l~gIP----GTVGGAv~mNAGayG~ei~d~l-------~sV~~ 153 (302)
T PRK14650 99 ECGTNFEDLCKFALQN--EL------------SGLEFIYGLP----GTLGGAIWMNARCFGNEISEIL-------DKITF 153 (302)
T ss_pred EeCCcHHHHHHHHHHc--CC------------chhhhhcCCC----cchhHHHHhhCCccccchheeE-------EEEEE
Confidence 9999999999874321 11 1133344443 78888774 442 234543 24555
Q ss_pred EeCCCCeEEEehhHhhcccccccCCC-CeEEEEEEccC
Q 000657 412 VDCKGNIRTTMAEEFFLGYRKVDLTS-GEILLSIFLPW 448 (1370)
Q Consensus 412 ~s~~g~~R~vpl~dF~~g~~~~~L~~-~Eil~~I~iP~ 448 (1370)
...+|..++++-+|.--+||...++. +.||+++.+..
T Consensus 154 ~d~~g~~~~~~~~e~~f~YR~S~f~~~~~iIl~a~f~L 191 (302)
T PRK14650 154 IDEKGKTICKKFKKEEFKYKISPFQNKNTFILKATLNL 191 (302)
T ss_pred EECCCCEEEEEHHHcCcccccccCCCCCEEEEEEEEEE
Confidence 66666688899999888999888875 34666665544
No 63
>PRK10713 2Fe-2S ferredoxin YfaE; Provisional
Probab=96.13 E-value=0.0099 Score=56.00 Aligned_cols=48 Identities=25% Similarity=0.483 Sum_probs=38.6
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.|+|.-+|+.+.+. +.+.+||+.|++.|+ ....+|.+|.||+|.+-+-
T Consensus 3 ~v~~~~~~~~~~~~--~~~~tlL~a~~~~gi-~~p~~Cr~G~Cg~C~~~~~ 50 (84)
T PRK10713 3 RVTLRITGTQLLCQ--DEHPSLLAALESHNV-AVEYQCREGYCGSCRTRLV 50 (84)
T ss_pred EEEEEeCCcEEEec--CCCCcHHHHHHHcCC-CCCCCCCCeECCCCEeEEE
Confidence 46677778776543 245999999999887 6889999999999999773
No 64
>TIGR02008 fdx_plant ferredoxin [2Fe-2S]. This model represents single domain 2Fe-2S (also called plant type) ferredoxins. In general, these occur as a single domain proteins or with a chloroplast transit peptide. Species tend to be photosynthetic, but several forms may occur in one species and individually may not be associated with photocynthesis. Halobacterial forms differ somewhat in architecture; they score between trusted and noise cutoffs. Sequences scoring below the noise cutoff tend to be ferredoxin-related domains of larger proteins.
Probab=96.11 E-value=0.0096 Score=57.70 Aligned_cols=43 Identities=19% Similarity=0.451 Sum_probs=36.3
Q ss_pred CCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 26 NGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 26 Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
+|..+.++ ++++.+||+.|++.|+ ....+|+.|.||.|.|-|-
T Consensus 11 ~~~~~~~~-~~~g~tLLda~~~~Gi-~i~~~C~~G~Cg~C~v~v~ 53 (97)
T TIGR02008 11 DGGEETIE-CPDDQYILDAAEEAGI-DLPYSCRAGACSTCAGKVE 53 (97)
T ss_pred CCCEEEEE-ECCCCcHHHHHHHcCC-CCCcCCCCccCCCCceEEE
Confidence 77556665 7799999999998886 4789999999999999773
No 65
>TIGR01973 NuoG NADH-quinone oxidoreductase, chain G. This model represents the G subunit (one of 14: A-N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria while translocating protons, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This model excludes related subunits from formate dehydrogenase complexes.
Probab=95.98 E-value=0.012 Score=75.82 Aligned_cols=93 Identities=25% Similarity=0.498 Sum_probs=70.8
Q ss_pred EEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCC------CCCCCceEEEEccccccCCcccceeecccccchhccCC
Q 000657 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG------EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEG 96 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 96 (1370)
|+|||+++++. +++||++.+++.|+.-. .=|. .|.|.-|.|.+++.. + +.+.||.+|+. +|
T Consensus 1 ~~idg~~~~~~---~g~~il~a~~~~gi~ip-~~C~~~~l~~~g~Cr~C~v~v~g~~----~---~~~~aC~~~~~--~g 67 (603)
T TIGR01973 1 IFIDGKELEVP---KGTTVLQACLSAGIEIP-RFCYHEKLSIAGNCRMCLVEVEKFP----D---KPVASCATPVT--DG 67 (603)
T ss_pred CEECCEEEEeC---CCCHHHHHHHHcCCCcc-ccCCCCCCCCCCccccCEEEECCCC----C---CcccccCCCCC--CC
Confidence 58999998764 89999999998765433 3575 899999999998621 1 37999999976 79
Q ss_pred cEEEEeccccCCCCCC----CHHHHHHHHcCCCCCCCCChHH
Q 000657 97 MHVITVEGVGNRKHGL----HPIQESLVRSHGSQCGFCTPGF 134 (1370)
Q Consensus 97 ~~i~TvEgl~~~~~~~----~~iq~a~~~~~~~qCG~CtpG~ 134 (1370)
+.|.|- ..++ .-+.+.+...|-.-|..|.-+-
T Consensus 68 m~v~t~------~~~~~~~r~~~~e~ll~~h~~dC~~C~~~g 103 (603)
T TIGR01973 68 MKISTN------SEKVKKAREGVMEFLLINHPLDCPICDQGG 103 (603)
T ss_pred CEEEeC------CHHHHHHHHHHHHHHHhcCCCCCCcCCCCC
Confidence 999982 2333 3355667777888999999863
No 66
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage. One of the enzymes Vanillyl-alcohol oxidase (VAO, 1.1.3.38 from EC) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110 []. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyses the oxidation of a wide variety of substrates, ranging from aromatic amines to 4-alkylphenols. ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZR6_A 3HSU_A 2AXR_A 3D2J_A 3D2H_A 3FW9_A 3FW8_A 3FW7_A 3GSY_A 3FWA_A ....
Probab=95.96 E-value=0.024 Score=58.39 Aligned_cols=102 Identities=13% Similarity=0.158 Sum_probs=70.7
Q ss_pred eEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHH
Q 000657 272 KWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLK 347 (1370)
Q Consensus 272 ~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~ 347 (1370)
.+++|+|.+|+.++++.. . ..++.+||+...-. .......+||+++++....+..++..++++|++++.||.+
T Consensus 3 ~vv~P~s~~ev~~~v~~a~~~~~~v~~~g~G~~~~~~---~~~~~~ivi~~~~l~~i~~id~~~~~v~v~aG~~~~~l~~ 79 (139)
T PF01565_consen 3 AVVRPKSVEEVQAIVKFANENGVPVRVRGGGHSWTGQ---SSDEGGIVIDMSRLNKIIEIDPENGTVTVGAGVTWGDLYE 79 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTSEEEEESSSTTSSST---TSSTTEEEEECTTCGCEEEEETTTTEEEEETTSBHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCcccc---cccCCcEEEeeccccccccccccceeEEEeccccchhccc
Confidence 478999999999887754 2 35677888887531 1135678999998665444555578999999999999999
Q ss_pred HHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccC
Q 000657 348 MFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393 (1370)
Q Consensus 348 ~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~as 393 (1370)
.|.+.-..++ -.+.--.-+|+||.+++..
T Consensus 80 ~l~~~g~~~~-----------------~~~~~~~~~tvGG~i~~~~ 108 (139)
T PF01565_consen 80 ALAPRGLMLP-----------------VEPGSGIPGTVGGAIAGNG 108 (139)
T ss_dssp HHHHHTEEES-----------------SGGGSTTTSBHHHHHHTT-
T ss_pred cccccccccc-----------------ccccccccceEchhhcCCC
Confidence 8754322111 1233345679999998754
No 67
>CHL00134 petF ferredoxin; Validated
Probab=95.95 E-value=0.015 Score=56.64 Aligned_cols=43 Identities=19% Similarity=0.495 Sum_probs=37.7
Q ss_pred CCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 26 NGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 26 Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
+|..+.++ ++++.+||+.|++.|+ ....+|+.|.||.|.|-+-
T Consensus 13 ~~~~~~~~-~~~~~tLL~a~~~~Gi-~i~~~C~~G~Cg~C~v~v~ 55 (99)
T CHL00134 13 EGIDVTID-CPDDVYILDAAEEQGI-DLPYSCRAGACSTCAGKVT 55 (99)
T ss_pred CCCeEEEE-ECCCCcHHHHHHHcCC-CCCcCCCCccCCCCEEEEE
Confidence 77776775 8899999999999886 7889999999999999874
No 68
>PRK09130 NADH dehydrogenase subunit G; Validated
Probab=95.81 E-value=0.019 Score=74.66 Aligned_cols=94 Identities=29% Similarity=0.442 Sum_probs=69.8
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCC------CCCCCceEEEEccccccCCcccceeecccccchhcc
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG------EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL 94 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~ 94 (1370)
++++|||+++++. +++|||+..|+.|+.=.. =|- .|.|.-|.|.+++.. .+++.||.+|+.
T Consensus 2 ~~~~Idg~~v~v~---~g~til~a~~~~gi~IP~-lCy~~~l~~~g~Cr~ClVev~~~~-------~~~~~sC~~~v~-- 68 (687)
T PRK09130 2 VKLKVDGKEIEVP---DGYTLLQACEAAGAEIPR-FCYHERLSIAGNCRMCLVEVKGGP-------PKPVASCAMPVG-- 68 (687)
T ss_pred eEEEECCEEEEeC---CCCHHHHHHHHcCCCcCc-ccCCCCCCCCCCCCCCEEEECCCC-------CCcccccCCCCC--
Confidence 7899999998754 899999999987765433 353 799999999997510 157999999976
Q ss_pred CCcEEEEeccccCCCCCC----CHHHHHHHHcCCCCCCCCChH
Q 000657 95 EGMHVITVEGVGNRKHGL----HPIQESLVRSHGSQCGFCTPG 133 (1370)
Q Consensus 95 ~g~~i~TvEgl~~~~~~~----~~iq~a~~~~~~~qCG~CtpG 133 (1370)
+|+.|.| ..... .-+.+-+...|-.-|..|.-|
T Consensus 69 ~gm~v~T------~s~~v~~~r~~~le~ll~~Hp~dC~~C~~~ 105 (687)
T PRK09130 69 EGMVIFT------NTPMVKKAREGVMEFLLINHPLDCPICDQG 105 (687)
T ss_pred CCCEEEe------CCHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 7999998 22333 334555666777778777653
No 69
>PRK09129 NADH dehydrogenase subunit G; Validated
Probab=95.76 E-value=0.013 Score=77.70 Aligned_cols=106 Identities=22% Similarity=0.359 Sum_probs=75.5
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCC------CCCCCceEEEEccccccCCcccceeecccccchhc
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG------EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYS 93 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 93 (1370)
+|+|+|||+++++. +++||++.++..|..-. .=|- .|.|.-|.|.+++.. +.+.||.+|+.
T Consensus 1 m~~~~idg~~~~~~---~g~~il~a~~~~g~~ip-~~c~~~~~~~~~~C~~C~v~v~~~~--------~~~~aC~~~~~- 67 (776)
T PRK09129 1 MVEIEIDGKKVEVP---EGSMVIEAADKAGIYIP-RFCYHKKLSIAANCRMCLVEVEKAP--------KPLPACATPVT- 67 (776)
T ss_pred CeEEEECCEEEEeC---CCCHHHHHHHHcCCCCC-cccCCCCCCCCCCcceeEEEECCCC--------CcCcccCCCCC-
Confidence 37899999999764 89999999998654332 1243 689999999998621 45899999986
Q ss_pred cCCcEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHH
Q 000657 94 LEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSL 141 (1370)
Q Consensus 94 ~~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~l 141 (1370)
+|+.|.|-.--- .+.-.-+-+.+...|-..|..|..+-=.-+-.+
T Consensus 68 -~gm~v~t~~~~~--~~~r~~~l~~ll~~h~~~C~~c~~~g~C~Lq~~ 112 (776)
T PRK09129 68 -DGMKVFTRSEKA--LKAQKSVMEFLLINHPLDCPICDQGGECQLQDL 112 (776)
T ss_pred -CCCEEEcCCHHH--HHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHH
Confidence 799999821100 011234556677789999999998765544443
No 70
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion]
Probab=95.54 E-value=0.021 Score=70.83 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=77.8
Q ss_pred ceEEecCCHHHHHHHHhhCC--C--cEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKYP--D--SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~--~--a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~ 346 (1370)
..+..|+|.+|+.++++... + ....+|||++.-...-. . .++||+.++..+..|..++..+++.+++++.+|.
T Consensus 33 ~~v~~p~s~~eV~~iv~~a~~~~~~v~prG~gts~~g~~~~~-~--gvvl~l~~mn~i~~id~~~~~~~v~aGv~l~~l~ 109 (459)
T COG0277 33 LAVVFPKSEEEVAAILRLANENGIPVVPRGGGTSLSGGAVPD-G--GVVLDLSRLNRILEIDPEDGTATVQAGVTLEDLE 109 (459)
T ss_pred CEEEccCCHHHHHHHHHHHHHcCCeEEEECCCCCccccccCC-C--cEEEEchhhcchhccCcCCCEEEEcCCccHHHHH
Confidence 46889999999988877652 2 56679999986533222 1 7899999966666666678899999999999999
Q ss_pred HHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccC
Q 000657 347 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393 (1370)
Q Consensus 347 ~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~as 393 (1370)
+.|++.--.++ ..++.++.+||||||++.+
T Consensus 110 ~~l~~~G~~~p-----------------~~p~s~~~~tIGG~ia~~~ 139 (459)
T COG0277 110 KALAPHGLFLP-----------------VDPSSSGTATIGGNIATNA 139 (459)
T ss_pred HHHHHcCCccC-----------------CCccccccceEccchhcCC
Confidence 98765422222 4677779999999999864
No 71
>PLN03136 Ferredoxin; Provisional
Probab=95.34 E-value=0.026 Score=58.67 Aligned_cols=50 Identities=14% Similarity=0.300 Sum_probs=38.8
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.+|.|.-++...+++ ++++.+|||.+++.|+. ...+|+.|.||.|.+-+-
T Consensus 55 ~~V~l~~~~~~~~~~-~~~g~tILdAa~~~Gi~-lp~sCr~G~CGtC~~~l~ 104 (148)
T PLN03136 55 YKVKFITPEGEQEVE-CEEDVYVLDAAEEAGID-LPYSCRAGSCSSCAGKVV 104 (148)
T ss_pred EEEEEecCCCcEEEE-eCCCCcHHHHHHHcCCC-CCcCCCCccCCCCEEEEe
Confidence 345554354445564 77999999999998854 889999999999999873
No 72
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=95.13 E-value=0.15 Score=59.53 Aligned_cols=145 Identities=12% Similarity=0.146 Sum_probs=92.1
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCC--cEE
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD--GLE 335 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~--~l~ 335 (1370)
++.+++ ....|+.|+|.+|+.++++.. . ...++.||+-+.+.- .-....+|+++.- .+ .+..+++ .++
T Consensus 14 t~~iGg-~a~~~v~p~~~~dl~~~l~~~~~~~ip~~vlG~GSNlL~~d---~g~~GvVI~l~~~-~~-~i~~~~~~~~v~ 87 (295)
T PRK14649 14 SWRIGG-PARYFVEPTTPDEAIAAAAWAEQRQLPLFWLGGGSNLLVRD---EGFDGLVARYRGQ-RW-ELHEHGDTAEVW 87 (295)
T ss_pred EeeeCc-eeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEecceeEEEeC---CCcCeEEEEecCC-Cc-EEEEeCCcEEEE
Confidence 455666 456788899999999887533 2 367899999987632 1133578887542 23 4444445 699
Q ss_pred EcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccc-cccCC----CCChhHHHHhcCCEEE
Q 000657 336 IGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNI-CTASP----ISDLNPLWMASGAKFH 410 (1370)
Q Consensus 336 IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl-~~asp----~sD~~p~L~al~A~v~ 410 (1370)
+||++++.++...+.+. .+. -++..++. -||+||-+ ||+.- ++|.. . .|+
T Consensus 88 v~AG~~~~~l~~~~~~~--GL~------------GlE~l~GI----PGTvGGa~~mNaGayg~ei~d~l---~----~V~ 142 (295)
T PRK14649 88 VEAGAPMAGTARRLAAQ--GWA------------GLEWAEGL----PGTIGGAIYGNAGCYGGDTATVL---I----RAW 142 (295)
T ss_pred EEcCCcHHHHHHHHHHc--CCc------------cccccCCC----CcchhHHHHhhccccceEhheeE---E----EEE
Confidence 99999999999875431 111 01112222 26888844 56543 34433 2 245
Q ss_pred EEeCCCCeEEEehhHhhcccccccCCC
Q 000657 411 IVDCKGNIRTTMAEEFFLGYRKVDLTS 437 (1370)
Q Consensus 411 i~s~~g~~R~vpl~dF~~g~~~~~L~~ 437 (1370)
+...+|..++++-+|.+-|||.+.++.
T Consensus 143 ~~~~~g~~~~~~~~el~f~YR~S~~~~ 169 (295)
T PRK14649 143 LLLNGSECVEWSVHDFAYGYRTSVLKQ 169 (295)
T ss_pred EEeCCCCEEEEeHHHcCcccceeeccc
Confidence 556666688899999888898776653
No 73
>PTZ00038 ferredoxin; Provisional
Probab=95.13 E-value=0.04 Score=59.53 Aligned_cols=49 Identities=20% Similarity=0.372 Sum_probs=38.2
Q ss_pred eEEEEEEC-CEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 19 KEAILYVN-GLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 19 ~~i~~~~N-g~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
-.|+|.++ | ...++ +.++++||+.|++.|+ ....+|+.|.||.|.|-+-
T Consensus 96 ~~Vt~~~~~g-~~~~~-v~~geTILdAae~aGI-~lp~sCr~G~CGtCkvrV~ 145 (191)
T PTZ00038 96 YNITLQTPDG-EKVIE-CDEDEYILDAAERQGV-ELPYSCRGGSCSTCAAKLL 145 (191)
T ss_pred EEEEEEeCCC-cEEEE-eCCCCcHHHHHHHcCC-CCCcCCCCccCCCCEeEEe
Confidence 35666533 4 23444 6789999999999886 7889999999999999773
No 74
>TIGR01676 GLDHase galactonolactone dehydrogenase. This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.
Probab=95.07 E-value=0.09 Score=65.71 Aligned_cols=130 Identities=8% Similarity=0.060 Sum_probs=82.9
Q ss_pred ceEEecCCHHHHHHHHhhCC----CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~----~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~ 346 (1370)
..+++|+|.+|+.++++... ..+.++||++..-.. .....+||++++..+-.|..+...++++|++++.+|.
T Consensus 63 ~~~~~P~s~eEV~~iV~~A~~~g~~Vr~~GsGhS~sg~a----~t~g~lldL~~ln~Vl~vD~~~~tVtV~AG~~l~~L~ 138 (541)
T TIGR01676 63 RTFHQPEAIEELEGIVKQANEKKARIRPVGSGLSPNGIG----LSRAGMVNLALMDKVLEVDEEKKRVRVQAGIRVQQLV 138 (541)
T ss_pred ceEECCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCcc----cCCCeEEEhhhCCCCEEEcCCCCEEEEcCCCCHHHHH
Confidence 56899999999999887642 367888888763311 1124589999877776677777889999999999999
Q ss_pred HHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCC-ChhHHHHhcCCEEEEEeCCCCeEEEe
Q 000657 347 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPIS-DLNPLWMASGAKFHIVDCKGNIRTTM 422 (1370)
Q Consensus 347 ~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~s-D~~p~L~al~A~v~i~s~~g~~R~vp 422 (1370)
+.|.+.--. +.+..--+..||||+|+++..-+ --...+...=-.++|+..+|+.+++.
T Consensus 139 ~~L~~~Gla------------------l~n~gsi~~~TIGGaiatgtHGtg~~~G~l~d~V~~l~lVta~G~vv~~s 197 (541)
T TIGR01676 139 DAIKEYGIT------------------LQNFASIREQQIGGIIQVGAHGTGAKLPPIDEQVIAMKLVTPAKGTIEIS 197 (541)
T ss_pred HHHHHcCCE------------------eccCCCCCCceEccccccCCcCCCCCCCCHHHhEEEEEEEECCCCEEEEC
Confidence 886542111 12222235578999999864321 11122222222355666655455543
No 75
>PRK08166 NADH dehydrogenase subunit G; Validated
Probab=94.98 E-value=0.034 Score=74.42 Aligned_cols=103 Identities=22% Similarity=0.332 Sum_probs=73.7
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCC------CCCCCceEEEEccccccCCcccceeecccccchhcc
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG------EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL 94 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~ 94 (1370)
++|+|||+++++ .+++|||+.++..|+. +-..|. .|.|+.|.|.+.+- +.++ ....+.||.+|+.
T Consensus 2 ~~i~idg~~~~~---~~g~til~a~~~~gi~-ip~~C~~~~~~~~G~C~~C~v~v~~g-~~~~--~~~~~~aC~~~v~-- 72 (847)
T PRK08166 2 ATIHVDGKEYEV---NGADNLLEACLSLGID-IPYFCWHPALGSVGACRQCAVKQYQN-PEDT--RGRLVMSCMTPAT-- 72 (847)
T ss_pred eEEEECCEEEEe---CCCCHHHHHHHHcCCC-CCccccCCCCCCCCccCCCeEEEeec-CccC--CCCcccCcCCCCC--
Confidence 689999999765 4899999999987653 346787 69999999998420 0011 1246889999876
Q ss_pred CCcEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHH
Q 000657 95 EGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGF 134 (1370)
Q Consensus 95 ~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~ 134 (1370)
+|+.|.|-.--- ...-.-+.+-+...|-..|..|.-+-
T Consensus 73 ~gm~v~t~~~~~--~~~r~~~~e~ll~~hp~dc~~c~~~g 110 (847)
T PRK08166 73 DGTFISIDDPEA--KAFRASVVEWLMTNHPHDCPVCEEGG 110 (847)
T ss_pred CCCEEEeCCHHH--HHHHHHHHHHHHhcCCCCCCccCCCC
Confidence 599998832110 11223467778889999999998663
No 76
>PRK11872 antC anthranilate dioxygenase reductase; Provisional
Probab=94.98 E-value=0.03 Score=66.86 Aligned_cols=48 Identities=25% Similarity=0.401 Sum_probs=40.9
Q ss_pred EEEEE---CCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 21 AILYV---NGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 21 i~~~~---Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.+++| ||+.+..+ +.++.|||+.|++.|+ ....+|++|.||.|.|-+-
T Consensus 3 ~~v~~~~~~~~~~~~~-~~~g~tlL~a~~~~g~-~~p~~C~~G~Cg~C~~~~~ 53 (340)
T PRK11872 3 HKVALSFADGKTLFFP-VGKDELLLDAALRNGI-NLPLDCREGVCGTCQGRCE 53 (340)
T ss_pred eEEEEEecCCcEEEEE-eCCCCcHHHHHHHcCC-CCcCCCCCeECCCCEEEEE
Confidence 45666 99988775 7899999999998886 6788999999999999773
No 77
>PRK11183 D-lactate dehydrogenase; Provisional
Probab=94.91 E-value=0.062 Score=66.38 Aligned_cols=106 Identities=23% Similarity=0.187 Sum_probs=69.7
Q ss_pred ceEEecCCHHHHHHHHhhCC--C--cEEEeccCccee-eeeec--ccccceEEecCCcccccceeecCCcEEEcccccHH
Q 000657 271 LKWYRPLKLQHLLELKSKYP--D--SKLLVGNTEVGI-EMRLK--RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLT 343 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~--~--a~lvaGgTdl~v-~~k~~--~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~ 343 (1370)
..-..|.|.+|..++++--- + ...-+|||+|.- ..-.+ .....++||+.+...+..|. ++..+++.++||+.
T Consensus 40 ~AVV~P~SteEVa~IVklC~e~~vPVIPRGgGTGLtGGAvP~~~~~dR~gVVIsl~RMNrIleID-~~~~VvVePGVtl~ 118 (564)
T PRK11183 40 LAVVFPGTLLELWRVLQACVAADKIIIMQAANTGLTGGSTPNGNDYDRDIVIISTLRLDKIQLLN-NGKQVLALPGTTLY 118 (564)
T ss_pred CEEEecCCHHHHHHHHHHHHHcCCeEEEeCCCcccccCcccCCCCCcCCEEEEEhhHcCCcEEEC-CCCeEEEeCCCcHH
Confidence 46789999999998877542 2 344589999832 22111 12346899998866665565 45679999999999
Q ss_pred HHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccC
Q 000657 344 ELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393 (1370)
Q Consensus 344 ~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~as 393 (1370)
+|.+.+++.-...++ .++|.+|- +||||||++.+
T Consensus 119 ~LeeaLk~~Gl~p~s--------------d~GSS~IG--asIGGnIAtNA 152 (564)
T PRK11183 119 QLEKALKPLGREPHS--------------VIGSSCIG--ASVIGGICNNS 152 (564)
T ss_pred HHHHHHHHhCCCCCC--------------cccccccC--CCCccceEECC
Confidence 999988654221110 12333333 39999999764
No 78
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1.
Probab=94.73 E-value=0.086 Score=65.02 Aligned_cols=102 Identities=16% Similarity=0.196 Sum_probs=67.6
Q ss_pred ceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~ 346 (1370)
...++|+|.+|+.++++.. . ..++++||++..-. .....++||++++..+..|..+...++++|++++.+|.
T Consensus 16 ~~v~~P~s~eev~~iv~~A~~~~~~v~v~G~GhS~s~~----~~~~gvvIdl~~l~~i~~id~~~~~vtV~aG~~l~~L~ 91 (438)
T TIGR01678 16 EVYYQPTSVEEVREVLALAREQKKKVKVVGGGHSPSDI----ACTDGFLIHLDKMNKVLQFDKEKKQITVEAGIRLYQLH 91 (438)
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCeEEEECCCCCCCCC----ccCCeEEEEhhhcCCceEEcCCCCEEEEcCCCCHHHHH
Confidence 4689999999999888653 2 36778888554221 11236899998865554455555689999999999999
Q ss_pred HHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC
Q 000657 347 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP 394 (1370)
Q Consensus 347 ~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp 394 (1370)
+.|.+.--. +....=-+..||||.|.++..
T Consensus 92 ~~L~~~Gl~------------------l~~~g~~~~~TvGG~iatg~h 121 (438)
T TIGR01678 92 EQLDEHGYS------------------MSNLGSISEVSVAGIISTGTH 121 (438)
T ss_pred HHHHHcCCE------------------ecCCCCCCCceeeehhcCCCC
Confidence 887542110 111111245899998877644
No 79
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.64 E-value=0.22 Score=58.85 Aligned_cols=153 Identities=16% Similarity=0.159 Sum_probs=101.5
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhCC----CcEEEeccCcceeeeeecccccceEEecCCcccccceee---cCC--
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNV---KDD-- 332 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~~----~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~---~~~-- 332 (1370)
++.+++ .-..|+.|+|.+|+.++++... ...+|.||+-+.+.- + .+.++|.+ + |+.++. +++
T Consensus 14 t~riGG-~A~~~~~p~~~~el~~~~~~~~~~~~p~~vlG~GSNlLv~D--~--~~g~vI~~-~---~~~~~~~~~~~~~~ 84 (334)
T PRK00046 14 TFGIDA-RARHLVEAESEEQLLEALADARAAGLPVLVLGGGSNVLFTE--D--FDGTVLLN-R---IKGIEVLSEDDDAW 84 (334)
T ss_pred eeccCc-EEeEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceEEEEECC--C--CCEEEEEe-c---CCceEEEecCCCeE
Confidence 455666 4567889999999999886432 367899999998842 2 34666765 3 444444 333
Q ss_pred cEEEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCC----CCChhHHHHhcCC
Q 000657 333 GLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP----ISDLNPLWMASGA 407 (1370)
Q Consensus 333 ~l~IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp----~sD~~p~L~al~A 407 (1370)
.+++||++.+.+|.....+. .+ .-++..++.+ ||+||-++ ||.- ++|.. -
T Consensus 85 ~v~a~AG~~~~~l~~~~~~~--gl------------~GlE~l~gIP----GTVGGAv~mNaGayG~ei~d~l-------~ 139 (334)
T PRK00046 85 YLHVGAGENWHDLVLWTLQQ--GM------------PGLENLALIP----GTVGAAPIQNIGAYGVELKDVC-------D 139 (334)
T ss_pred EEEEEcCCcHHHHHHHHHHc--Cc------------hhhHHhcCCC----cchhHHHHhcCCcCcccHheeE-------E
Confidence 69999999999999875431 11 1234444444 78888773 4432 34443 2
Q ss_pred EEEEEeCC-CCeEEEehhHhhcccccccCCCC----eEEEEEEccC
Q 000657 408 KFHIVDCK-GNIRTTMAEEFFLGYRKVDLTSG----EILLSIFLPW 448 (1370)
Q Consensus 408 ~v~i~s~~-g~~R~vpl~dF~~g~~~~~L~~~----Eil~~I~iP~ 448 (1370)
+|++...+ |..+++.-+|..-+||.+.++.+ .||+++.+.+
T Consensus 140 ~V~v~d~~~g~~~~~~~~e~~f~YR~S~f~~~~~~~~iVl~a~f~L 185 (334)
T PRK00046 140 YVEALDLATGEFVRLSAAECRFGYRDSIFKHEYPDRYAITAVGFRL 185 (334)
T ss_pred EEEEEECCCCcEEEEEHHHcCcccccccCCCCCcCCEEEEEEEEEe
Confidence 46666654 66889999998889998888753 4677666554
No 80
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=94.17 E-value=0.26 Score=62.25 Aligned_cols=156 Identities=11% Similarity=0.123 Sum_probs=87.0
Q ss_pred CceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHH
Q 000657 270 GLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1370)
Q Consensus 270 ~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1370)
...+++|+|.+|+.++++.. + ..+++++|.+..-.. .....+||++++..+-.|..+...++++|++++.+|
T Consensus 97 p~~vv~P~S~eEV~~iV~~A~~~g~~VrvvGsGhS~~~l~----~td~glIdL~~l~~Il~vD~e~~~VtV~AG~~l~~L 172 (573)
T PLN02465 97 TRRYHQPESLEELEDIVKEAHEKGRRIRPVGSGLSPNGLA----FSREGMVNLALMDKVLEVDKEKKRVTVQAGARVQQV 172 (573)
T ss_pred CCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCee----eCCCEEEECcCCCCcEEEeCCCCEEEEccCCCHHHH
Confidence 34689999999999988753 2 467888887432111 122357898875544444445568999999999999
Q ss_pred HHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCCh-hHHHHhcCCEEEEEeCCCCeEEEehh
Q 000657 346 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDL-NPLWMASGAKFHIVDCKGNIRTTMAE 424 (1370)
Q Consensus 346 ~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~-~p~L~al~A~v~i~s~~g~~R~vpl~ 424 (1370)
.+.|.+.--. +...++ -+..||||.|.++..-+.. .+.+-..=-.++++..+|+..++.-+
T Consensus 173 ~~~L~~~GLa---------------l~n~g~---I~~~TIGGaIstGtHGtG~~~g~i~d~V~~l~lVta~G~vv~~s~~ 234 (573)
T PLN02465 173 VEALRPHGLT---------------LQNYAS---IREQQIGGFIQVGAHGTGARIPPIDEQVVSMKLVTPAKGTIELSKE 234 (573)
T ss_pred HHHHHHcCCE---------------eccCCC---CCCeeecchhhCCCCCcCCCcCcHhheEEEEEEEECCCCEEEECCC
Confidence 9887542111 111111 1357999999776433221 11111111124455555545555432
Q ss_pred ---HhhcccccccCCCCeEEEEEEccC
Q 000657 425 ---EFFLGYRKVDLTSGEILLSIFLPW 448 (1370)
Q Consensus 425 ---dF~~g~~~~~L~~~Eil~~I~iP~ 448 (1370)
|.|.. ....|..-.||+++.|-.
T Consensus 235 ~~pdLF~a-ar~glG~lGVIteVTLql 260 (573)
T PLN02465 235 DDPELFRL-ARCGLGGLGVVAEVTLQC 260 (573)
T ss_pred CCHHHHhH-hhccCCCCcEEEEEEEEE
Confidence 23321 112232224777776654
No 81
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.08 E-value=0.27 Score=58.86 Aligned_cols=154 Identities=15% Similarity=0.201 Sum_probs=96.2
Q ss_pred CCccccCCCCceEEecCCHHHHHHHHhhC----CCcEEEeccCcceeeeeecccccceEEecCCcccccceeec--CCcE
Q 000657 261 NPLNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK--DDGL 334 (1370)
Q Consensus 261 ~~~~~~~~~~~~~~~P~sl~e~l~ll~~~----~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~--~~~l 334 (1370)
.++.+++ .-..|+.|+|.+|+.++++.. -...++.||+-+.+. . .-.+.++|+++. +.|+.+ ++.+
T Consensus 25 tt~~iGg-~A~~~~~p~s~edl~~~l~~a~~~~~p~~vlGgGSNlLv~--D-~g~~GvVI~l~~----~~i~i~~~~~~v 96 (363)
T PRK13903 25 TTLRVGG-PARRLVTCTSTEELVAAVRELDAAGEPLLVLGGGSNLVIA--D-DGFDGTVVRVAT----RGVTVDCGGGLV 96 (363)
T ss_pred cEeecCc-cceEEEEeCCHHHHHHHHHHHHHCCCCEEEEeCCeeEeEC--C-CCccEEEEEeCC----CcEEEeCCCCEE
Confidence 3455666 445688999999999887643 246789999998752 1 113467888863 555555 6789
Q ss_pred EEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCC----CCChhHHHHhcCCEE
Q 000657 335 EIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP----ISDLNPLWMASGAKF 409 (1370)
Q Consensus 335 ~IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp----~sD~~p~L~al~A~v 409 (1370)
++||++++.++...+.+. .+. -|+..++. -||+||-+. |+.- ++|... .|
T Consensus 97 ~vgAG~~~~~l~~~a~~~--GL~------------GlE~laGI----PGTVGGAv~mNaGayG~ei~D~l~-------sV 151 (363)
T PRK13903 97 RAEAGAVWDDVVARTVEA--GLG------------GLECLSGI----PGSAGATPVQNVGAYGQEVSDTIT-------RV 151 (363)
T ss_pred EEEcCCCHHHHHHHHHHc--CCc------------cccccCCC----CcchhhHhhcCCChhHHHHhhhEe-------EE
Confidence 999999999999875432 111 01111222 267777764 3322 344332 34
Q ss_pred EEEeCC-CCeEEEehhHhhcccccccCCCC--eEEEEEEcc
Q 000657 410 HIVDCK-GNIRTTMAEEFFLGYRKVDLTSG--EILLSIFLP 447 (1370)
Q Consensus 410 ~i~s~~-g~~R~vpl~dF~~g~~~~~L~~~--Eil~~I~iP 447 (1370)
++...+ |..++++-+|.+-+||...++.+ .||+++.+-
T Consensus 152 ~vvd~~~G~~~~~~~~el~f~YR~S~f~~~~~~IIl~a~f~ 192 (363)
T PRK13903 152 RLLDRRTGEVRWVPAADLGFGYRTSVLKHSDRAVVLEVEFQ 192 (363)
T ss_pred EEEECCCCEEEEEEHHHcceeccccccCCCCCEEEEEEEEE
Confidence 555533 65788888898888988777642 355555443
No 82
>PTZ00490 Ferredoxin superfamily; Provisional
Probab=94.05 E-value=0.1 Score=54.09 Aligned_cols=85 Identities=20% Similarity=0.277 Sum_probs=57.8
Q ss_pred eEEEEEEC---CEEEEeccCCCCCcHHHHHhhCCCCccccCCC-CCCCCceEEEEcc-c-ccc-----------C-C-cc
Q 000657 19 KEAILYVN---GLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSR-Y-DKK-----------S-K-KC 79 (1370)
Q Consensus 19 ~~i~~~~N---g~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~-~-~~~-----------~-~-~~ 79 (1370)
.++++++| |+.++++ ++++.+|++.||+.+.-+.-.-|+ .|.||-|.|.|.. + +.. + . ..
T Consensus 34 g~v~I~~~~~dG~~~~v~-~~~G~sLLeal~~~~~i~i~~~CGG~g~CgtC~V~V~~g~~~~l~~~~~~E~~~L~~~~~~ 112 (143)
T PTZ00490 34 GKVKVCVKKRDGTHCDVE-VPVGMSLMHALRDVAKLDVEGTCNGCMQCATCHVYLSAASFKKLGGPSEEEEDVLAKALDV 112 (143)
T ss_pred CcEEEEEEcCCCCEEEEE-ECCCccHHHHHHHcCCCCccccCCCCCEeCCCEEEECCCccccCCCCChHHHHHhhccccC
Confidence 34555553 6778886 889999999999864456666788 8999999999965 1 000 0 0 11
Q ss_pred cceeecccccchhc-cCCcEEEEecc
Q 000657 80 VHCAVNACLAPLYS-LEGMHVITVEG 104 (1370)
Q Consensus 80 ~~~~v~sCl~~~~~-~~g~~i~TvEg 104 (1370)
.-..-.||.+.+.. ++|..|..-|-
T Consensus 113 ~~gsRLaCQi~v~~~ldgl~V~vp~~ 138 (143)
T PTZ00490 113 KETSRLACQVDLTPEMDGLEVELPSY 138 (143)
T ss_pred CCCcEEeeeEEEecCCCCEEEEeCcc
Confidence 22334889988865 67887775543
No 83
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=94.04 E-value=0.14 Score=64.23 Aligned_cols=103 Identities=13% Similarity=0.065 Sum_probs=70.6
Q ss_pred ceEEecCCHHHHHHHHhhC--CC--cEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKY--PD--SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~--~~--a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~ 346 (1370)
...++|.|.+|+.++++.. .+ ..+.+|||++.-.. ......++||+++......|..++..++++|++++.+|.
T Consensus 57 ~~Vv~P~s~eeV~~iv~~a~~~~ipv~~rG~Gt~~~gg~--~~~~~gividl~~ln~I~~id~~~~~v~VeaGv~~~~L~ 134 (499)
T PRK11230 57 LLVVLPKQMEQVQALLAVCHRLRVPVVARGAGTGLSGGA--LPLEKGVLLVMARFNRILDINPVGRRARVQPGVRNLAIS 134 (499)
T ss_pred CEEEeeCCHHHHHHHHHHHHHcCCeEEEECCCcCcCCCc--ccCCCcEEEEcccCCCceEEcCCCCEEEEcCCccHHHHH
Confidence 3578999999998887643 12 34668888872211 111346899999966555556666789999999999999
Q ss_pred HHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccccc
Q 000657 347 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392 (1370)
Q Consensus 347 ~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a 392 (1370)
+.|.+.--.+ -..++-...+||||||++.
T Consensus 135 ~~l~~~Gl~~-----------------~~~p~s~~~~tvGG~ia~n 163 (499)
T PRK11230 135 QAAAPHGLYY-----------------APDPSSQIACSIGGNVAEN 163 (499)
T ss_pred HHHHHcCCee-----------------CCCCCccccceEcceeccC
Confidence 9876432111 1234445679999999864
No 84
>PLN02593 adrenodoxin-like ferredoxin protein
Probab=93.97 E-value=0.074 Score=53.41 Aligned_cols=48 Identities=19% Similarity=0.385 Sum_probs=40.8
Q ss_pred EEEE-EECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCC-CCCCceEEEE
Q 000657 20 EAIL-YVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGE-GGCGACTVMV 69 (1370)
Q Consensus 20 ~i~~-~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~-G~CGaCtV~~ 69 (1370)
+|+| ...|+..+++ +.++++|++.+++.|+. .-..|+. |.||.|-|.|
T Consensus 2 ~V~fi~~~G~~~~v~-~~~G~tLl~a~~~~gi~-i~~~CgG~g~C~tC~V~V 51 (117)
T PLN02593 2 SVTFVDKDGEERTVK-APVGMSLLEAAHENDIE-LEGACEGSLACSTCHVIV 51 (117)
T ss_pred EEEEEcCCCCEEEEE-ECCCCcHHHHHHHcCCC-CCccCCCcceeCCCEEEE
Confidence 4677 4789888886 78999999999998874 7778995 9999999999
No 85
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=93.90 E-value=0.39 Score=60.84 Aligned_cols=107 Identities=14% Similarity=0.087 Sum_probs=65.2
Q ss_pred ceEEecCCHHHHHHHHhhCC----CcEEEeccC-cceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKYP----DSKLLVGNT-EVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~----~a~lvaGgT-dl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1370)
...++|+|.+|+.++++... ..++++|++ .+.-........-.++||++++..+-.|..+...++++|++++.+|
T Consensus 33 ~~vv~P~s~eeV~~iV~~A~~~g~~v~v~GG~gHs~~~~a~t~~~~ggvvIdL~~Ln~il~iD~~~~tVtV~AG~~l~~L 112 (557)
T TIGR01677 33 ANVAYPKTEAELVSVVAAATAAGRKMKVVTRYSHSIPKLACPDGSDGALLISTKRLNHVVAVDATAMTVTVESGMSLREL 112 (557)
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCcCcccccCCCCCEEEEEcccCCCCEEEeCCCCEEEECCCCcHHHH
Confidence 46899999999999887542 245554432 2211000000011389999986655555555678999999999999
Q ss_pred HHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCC
Q 000657 346 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPI 395 (1370)
Q Consensus 346 ~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~ 395 (1370)
.+.|.+.--.++ ..+.+- ..||||.|.++..-
T Consensus 113 ~~~L~~~Glal~-----------------~~~~~~-~~TVGGaiatGthG 144 (557)
T TIGR01677 113 IVEAEKAGLALP-----------------YAPYWW-GLTVGGMMGTGAHG 144 (557)
T ss_pred HHHHHHcCCEec-----------------cCCCCC-CeEeeEhhhCCCCC
Confidence 998764311111 111222 24999999876543
No 86
>TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=93.88 E-value=0.088 Score=63.15 Aligned_cols=51 Identities=16% Similarity=0.268 Sum_probs=43.3
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
-.++|+..|+.+....++++++||+.|++.|+ -+..+|+.|.||+|.|-+-
T Consensus 263 ~~v~~~~~~~~~~~~~~~~~~slL~~~~~~gi-~~~~~C~~G~Cg~C~~~~~ 313 (352)
T TIGR02160 263 SKVTVTLDGRSTETSSLSRDESVLDAALRARP-DLPFACKGGVCGTCRAKVL 313 (352)
T ss_pred eEEEEEECCceEEEEecCCCCcHHHHHHHcCC-CCcCCCCCccCCCCEEEEe
Confidence 46889999998763237899999999988886 6889999999999999774
No 87
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.
Probab=93.83 E-value=0.27 Score=60.44 Aligned_cols=155 Identities=15% Similarity=0.119 Sum_probs=90.6
Q ss_pred ceEEecCCHHHHHHHHhhCC-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 349 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l 349 (1370)
...++|+|.+|+.++++... ..++++||.+..... .....+||++++..+-.+..+...++++|++++.+|.+.|
T Consensus 13 ~~v~~P~s~~ev~~~v~~a~~~v~~~G~Ghs~~~~~----~~~g~~idl~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~L 88 (419)
T TIGR01679 13 SAIVRPTDEGELADVIAQAAKPVRAVGSGHSFTDLA----CTDGTMISLTGLQGVVDVDQPTGLATVEAGTRLGALGPQL 88 (419)
T ss_pred CeEECCCCHHHHHHHHHHhCCCEEEEeCCCCCCCcc----cCCCEEEEhhHcCCceeecCCCCEEEEcCCCCHHHHHHHH
Confidence 46889999999999887653 477888886654321 2235899998855444445557889999999999999887
Q ss_pred HHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCCh-hHHHHhcCCEEEEEeCCCCeEEEeh---hH
Q 000657 350 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDL-NPLWMASGAKFHIVDCKGNIRTTMA---EE 425 (1370)
Q Consensus 350 ~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~-~p~L~al~A~v~i~s~~g~~R~vpl---~d 425 (1370)
.+.--.+ + ..+ .+ +..||||.|.+...-+.. ...+-..=-.++|+..+|..+++.- .|
T Consensus 89 ~~~G~~l--------~-------~~~--~~-~~~tvGG~ia~~~hG~g~~~G~~~d~V~~l~vV~a~G~v~~~~~~~~~d 150 (419)
T TIGR01679 89 AQRGLGL--------E-------NQG--DI-DPQSIGGALGTATHGTGVRFQALHARIVSLRLVTAGGKVLDLSEGDDQD 150 (419)
T ss_pred HHcCCcc--------c-------cCC--CC-CCceeccceecCCCCCCccCCchhhhEEEEEEEcCCCCEEEEcCCCCHH
Confidence 5421111 0 111 22 347899999875432211 0111111123555666664445443 23
Q ss_pred hhcccccccCCCCeEEEEEEccC
Q 000657 426 FFLGYRKVDLTSGEILLSIFLPW 448 (1370)
Q Consensus 426 F~~g~~~~~L~~~Eil~~I~iP~ 448 (1370)
.|...+- .+..=-||+++.+-.
T Consensus 151 Lf~a~~g-~~G~lGVIt~vtl~~ 172 (419)
T TIGR01679 151 MYLAARV-SLGALGVISQVTLQT 172 (419)
T ss_pred HHHHHHh-CCCceEEEEEEEEEe
Confidence 4442211 122334777777654
No 88
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=93.61 E-value=0.13 Score=63.28 Aligned_cols=100 Identities=13% Similarity=0.084 Sum_probs=66.2
Q ss_pred EecCCHHHHHHHHhh---CC-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHH
Q 000657 274 YRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 349 (1370)
Q Consensus 274 ~~P~sl~e~l~ll~~---~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l 349 (1370)
++|+|.+|+.++++. +. ...+.+|||++.-..- .....++||+++......|..++..++++|++++.+|.+.|
T Consensus 2 v~P~s~eev~~iv~~a~~~~i~v~~~G~Gt~~~g~~~--~~~~~vvidl~~mn~i~~id~~~~~v~veaGv~~~~l~~~l 79 (413)
T TIGR00387 2 VFPKNTEQVARILKLCHEHRIPIVPRGAGTGLSGGAL--PEEGGLVLVFKHMNKILEIDVVNLTAVVQPGVRNLELEQAV 79 (413)
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcc--CCCCeEEEEhHHcCceeEEcCCCCEEEEcCCccHHHHHHHH
Confidence 469999998887763 32 3677899998742110 01246788987744433444446789999999999999987
Q ss_pred HHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccccc
Q 000657 350 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392 (1370)
Q Consensus 350 ~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a 392 (1370)
.+.--.++ -.++-...+|+||+|++.
T Consensus 80 ~~~gl~~~-----------------~~p~s~~~~tiGG~ia~n 105 (413)
T TIGR00387 80 EEHNLFYP-----------------PDPSSQISSTIGGNIAEN 105 (413)
T ss_pred HHcCCeeC-----------------CCCcccccceehhhhhcC
Confidence 64321111 134445679999999864
No 89
>PRK10684 HCP oxidoreductase, NADH-dependent; Provisional
Probab=93.36 E-value=0.091 Score=62.56 Aligned_cols=49 Identities=22% Similarity=0.273 Sum_probs=37.7
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.++++++....++. ++++.+||+.|++.|+ -+..+|+.|.||.|.|-+-
T Consensus 248 ~~~v~~~~~~~~~~-~~~~~~lL~~~~~~gi-~~~~~C~~G~Cg~C~~~~~ 296 (332)
T PRK10684 248 GLTFTKLQPAREFY-APVGTTLLEALESNKV-PVVAACRAGVCGCCKTKVV 296 (332)
T ss_pred ceEEEEecCCEEEE-eCCCChHHHHHHHcCC-CccCCCCCcCCCCCEEEEe
Confidence 34444544434443 6689999999998886 7889999999999999874
No 90
>COG0633 Fdx Ferredoxin [Energy production and conversion]
Probab=92.96 E-value=0.14 Score=50.12 Aligned_cols=48 Identities=29% Similarity=0.476 Sum_probs=37.0
Q ss_pred EEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEcc
Q 000657 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
...+|+......++.+.+||+.+.++|+. .-.+|+.|.||+|.|.|.+
T Consensus 7 v~~~~~~~~~~~~~~g~tiLe~a~~~gi~-i~~~C~~g~C~TC~v~v~~ 54 (102)
T COG0633 7 VTIDGEGDVTEAVNEGETLLEAAERNGIP-IEYACRGGACGTCRVKVLE 54 (102)
T ss_pred EeccCCcceEEeccCCcHHHHHHHHCCCc-ceecCCCCccCccEEEEec
Confidence 34455434444366689999999888887 7789999999999998864
No 91
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=92.95 E-value=0.83 Score=52.62 Aligned_cols=152 Identities=18% Similarity=0.301 Sum_probs=96.0
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEccccc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVR 341 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vT 341 (1370)
++.+++ .-+|+.|.|.+|+.++++ -...++.||+-+.+.- .-.+..+|.+++ .+..++.++ +.||++.
T Consensus 14 t~riGG--~A~~~~p~~~~~l~~~~~--~p~~vlG~GSNlL~~D---~g~~g~vI~l~~--~~~~~~~~~---~a~AG~~ 81 (273)
T PRK14651 14 TLGVGG--PAELWTVETHEQLAEATE--APYRVLGGGSNLLVSD---AGVPERVIRLGG--EFAEWDLDG---WVGGGVP 81 (273)
T ss_pred EeecCc--eEEEEecCCHHHHHHHHC--CCeEEEeceeEEEEcC---CCcceEEEEECC--cceeEeECC---EEECCCc
Confidence 455665 334444999999999983 3578899999987732 112356676643 255555443 7999999
Q ss_pred HHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCC-CCChhHHHHhcCCEEEEEeCCCCeE
Q 000657 342 LTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP-ISDLNPLWMASGAKFHIVDCKGNIR 419 (1370)
Q Consensus 342 l~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp-~sD~~p~L~al~A~v~i~s~~g~~R 419 (1370)
+.+|.....+. .+. -++..++-+ ||+||-++ ||.- -.++.=.|.. |++.. +|..+
T Consensus 82 ~~~l~~~~~~~--gl~------------GlE~l~gIP----GTVGGAv~mNaGayG~ei~d~l~~----V~~~~-~g~~~ 138 (273)
T PRK14651 82 LPGLVRRAARL--GLS------------GLEGLVGIP----AQVGGAVKMNAGTRFGEMADALHT----VEIVH-DGGFH 138 (273)
T ss_pred HHHHHHHHHHC--CCc------------chhhhcCCC----cchhhHHHhhCCccccChheeEEE----EEEEE-CCCEE
Confidence 99999875431 111 223334443 78888884 4432 2333333322 33333 45589
Q ss_pred EEehhHhhcccccccCCCCeEEEEEEccC
Q 000657 420 TTMAEEFFLGYRKVDLTSGEILLSIFLPW 448 (1370)
Q Consensus 420 ~vpl~dF~~g~~~~~L~~~Eil~~I~iP~ 448 (1370)
+++-+|..-+||.+.++.+.||+++.+..
T Consensus 139 ~~~~~e~~f~YR~S~~~~~~iIl~a~f~l 167 (273)
T PRK14651 139 QYSPDELGFGYRHSGLPPGHVVTRVRLKL 167 (273)
T ss_pred EEEHHHccccccccCCCCCEEEEEEEEEE
Confidence 99999988899998887666777666554
No 92
>PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated
Probab=92.92 E-value=0.1 Score=62.30 Aligned_cols=47 Identities=23% Similarity=0.446 Sum_probs=39.1
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.|+|.-+|+.++ ++++.+||+.|++.|+. ...+|+.|.||.|.|-+-
T Consensus 4 ~v~~~~~~~~~~---~~~g~tlL~a~~~~gi~-~~~~C~~G~Cg~C~~~~~ 50 (339)
T PRK07609 4 QVTLQPSGRQFT---AEPDETILDAALRQGIH-LPYGCKNGACGSCKGRLL 50 (339)
T ss_pred EEEEecCCeEEE---eCCCCcHHHHHHHcCCC-CCCCCCCeECCCCEEEEE
Confidence 577777777654 55899999999988865 789999999999999764
No 93
>TIGR02007 fdx_isc ferredoxin, 2Fe-2S type, ISC system. This family consists of proteobacterial ferredoxins associated with and essential to the ISC system of 2Fe-2S cluster assembly. This family is closely related to (but excludes) eukaryotic (mitochondrial) adrenodoxins, which are ferredoxins involved in electron transfer to P450 cytochromes.
Probab=92.91 E-value=0.1 Score=51.87 Aligned_cols=44 Identities=23% Similarity=0.396 Sum_probs=34.8
Q ss_pred EEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCC-CCCCCceEEEEc
Q 000657 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVS 70 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~ 70 (1370)
|.-+|+.++ +.++++||+.|++.|+. +-..|+ .|.||.|-|.|.
T Consensus 11 ~~p~~~~~~---~~~g~tLL~a~~~~gi~-i~~~CgG~G~CgtC~v~V~ 55 (110)
T TIGR02007 11 LCPEGAVVE---AKPGETILDVALDNGIE-IEHACEKSCACTTCHCIVR 55 (110)
T ss_pred cCCCCeEEE---ECCCChHHHHHHHcCCC-ccccCCCCceeCCCEEEEe
Confidence 334566554 55899999999998875 778998 699999999884
No 94
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=92.81 E-value=1.2 Score=51.34 Aligned_cols=155 Identities=23% Similarity=0.330 Sum_probs=100.5
Q ss_pred ccccCCCCceEEecCCHHHHHHHHhhCC----CcEEEeccCcceeeeeecccccceEEecCCcccccceee--cCCcEEE
Q 000657 263 LNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNV--KDDGLEI 336 (1370)
Q Consensus 263 ~~~~~~~~~~~~~P~sl~e~l~ll~~~~----~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~--~~~~l~I 336 (1370)
..+++ .-..|+.|++.+|+.++++... ...++.||+-+.+.-.. ...++|.+.. +..+.. +++.|++
T Consensus 15 friGg-~A~~~~~~~~~e~l~~~~~~~~~~~~p~~ilG~GSNlLv~d~g---~~gvvi~~~~---~~~~~~~~~~~~i~a 87 (291)
T COG0812 15 FRIGG-PAEVLVEPRDIEELKAALKYAKAEDLPVLILGGGSNLLVRDGG---IGGVVIKLGK---LNFIEIEGDDGLIEA 87 (291)
T ss_pred EecCc-ceeEEEecCCHHHHHHHHHhhhhcCCCEEEEecCceEEEecCC---CceEEEEccc---ccceeeeccCCeEEE
Confidence 44555 5568999999999988887653 36788999988773221 2234555443 333333 3348999
Q ss_pred cccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccc-ccc----CCCCChhHHHHhcCCEEEE
Q 000657 337 GAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNI-CTA----SPISDLNPLWMASGAKFHI 411 (1370)
Q Consensus 337 GA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl-~~a----sp~sD~~p~L~al~A~v~i 411 (1370)
||+..+.+|.....+. .++ - |+..+.-+ ||+||-+ ||+ .-++|.+. ++++
T Consensus 88 ~aG~~~~~l~~~~~~~--gl~-----G-------lE~l~gIP----GsvGgav~mNaGAyG~Ei~d~~~-------~v~~ 142 (291)
T COG0812 88 GAGAPWHDLVRFALEN--GLS-----G-------LEFLAGIP----GSVGGAVIMNAGAYGVEISDVLV-------SVEV 142 (291)
T ss_pred ccCCcHHHHHHHHHHc--CCc-----c-------hhhhcCCC----cccchhhhccCcccccchheeEE-------EEEE
Confidence 9999999998774431 111 0 11122222 5666655 333 22456553 4666
Q ss_pred EeCCCCeEEEehhHhhcccccccCCCC-eEEEEEEccCC
Q 000657 412 VDCKGNIRTTMAEEFFLGYRKVDLTSG-EILLSIFLPWT 449 (1370)
Q Consensus 412 ~s~~g~~R~vpl~dF~~g~~~~~L~~~-Eil~~I~iP~~ 449 (1370)
...+|..++++-+|.--|||...++.. -+|+++.+...
T Consensus 143 ld~~G~~~~l~~~el~f~YR~S~f~~~~~vvl~v~f~L~ 181 (291)
T COG0812 143 LDRDGEVRWLSAEELGFGYRTSPFKKEYLVVLSVEFKLT 181 (291)
T ss_pred EcCCCCEEEEEHHHhCcccccCcCCCCCEEEEEEEEEeC
Confidence 667888999999998889999999876 67777766654
No 95
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=92.64 E-value=0.99 Score=53.65 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=58.2
Q ss_pred CCccccCCCCceEEecCCHHHHHHHHhhCC----CcEEEeccCcceeeeeecccccceEEecCCccccccee-ecC-CcE
Q 000657 261 NPLNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLN-VKD-DGL 334 (1370)
Q Consensus 261 ~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~----~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~-~~~-~~l 334 (1370)
.++.+++ .-..|+.|.|.+|+.++++... ...++.||+-+.+.- .-.+..+|.+.++.++.-.. .++ ..|
T Consensus 22 tT~rIGG-~A~~~~~p~s~~el~~~l~~~~~~~~p~~iLG~GSNlL~~D---~g~~G~VI~l~~~~~i~i~~~~~~~~~v 97 (354)
T PRK14648 22 CSFRIGG-AAQFWAEPRSCTQLRALIEEAQRARIPLSLIGGGSNVLIAD---EGVPGLMLSLRRFRSLHTQTQRDGSVLV 97 (354)
T ss_pred ceeeeCc-EEEEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEeC---CCccEEEEEeCCcCceEEeeccCCcEEE
Confidence 3455666 5567999999999999886432 367889999988732 22346778775544442111 233 359
Q ss_pred EEcccccHHHHHHHHH
Q 000657 335 EIGAAVRLTELLKMFR 350 (1370)
Q Consensus 335 ~IGA~vTl~~l~~~l~ 350 (1370)
++||++.+.+|...+.
T Consensus 98 ~agAG~~~~~Lv~~~~ 113 (354)
T PRK14648 98 HAGAGLPVAALLAFCA 113 (354)
T ss_pred EEEeCCcHHHHHHHHH
Confidence 9999999999987743
No 96
>PRK05713 hypothetical protein; Provisional
Probab=92.01 E-value=0.2 Score=59.19 Aligned_cols=45 Identities=31% Similarity=0.443 Sum_probs=37.3
Q ss_pred EEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 22 ILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 22 ~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
+|+.||+.+++ .++.|||+.+++.|+. ...+|+.|.||.|.|.+-
T Consensus 3 ~~~~~~~~~~~---~~g~tlL~a~~~~gi~-~~~~C~~G~Cg~C~~~~~ 47 (312)
T PRK05713 3 ELRVGERRWSV---PAGSNLLDALNAAGVA-VPYSCRAGSCHACLVRCL 47 (312)
T ss_pred cEecCCeEEEE---CCCCcHHHHHHHcCCC-CCcCCCCcCCCCCeEEEE
Confidence 57899987665 5899999999987753 457899999999999884
No 97
>PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional
Probab=91.75 E-value=0.18 Score=61.74 Aligned_cols=52 Identities=31% Similarity=0.481 Sum_probs=42.3
Q ss_pred cceEEEEEECCE-EEEeccCCCCCcHHHHHhhCCCCccccCCCC-CCCCceEEEEc
Q 000657 17 WTKEAILYVNGL-RKVLPDGLAHLTLLEYLRDIGLTGTKLGCGE-GGCGACTVMVS 70 (1370)
Q Consensus 17 ~~~~i~~~~Ng~-~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~-G~CGaCtV~~~ 70 (1370)
.+.++++++||. ..+++ +.++++||+.|+..|+. ....|+. |.||.|.|-+.
T Consensus 32 ~~~~~~i~~~~~~~~~~~-~~~g~tLL~a~~~~gi~-i~~~C~g~G~CgtC~v~v~ 85 (409)
T PRK05464 32 PSGDVTIKINGDPEKTIT-VPAGGKLLGALASNGIF-LSSACGGGGSCGQCRVKVK 85 (409)
T ss_pred cCccEEEEEcCCCcEEEE-ECCCchHHHHHHHcCCC-cccCCCCccEeCCCEEEEe
Confidence 467888999983 34554 67999999999988875 6678995 99999999874
No 98
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=91.60 E-value=0.39 Score=60.90 Aligned_cols=101 Identities=15% Similarity=0.077 Sum_probs=69.6
Q ss_pred ceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~ 346 (1370)
...++|+|.+|+.++++.. . ...+.+|||++.-..- .....++||+++...+..|..++..++++|++++.+|.
T Consensus 135 ~~Vv~P~s~eeV~~ivk~a~~~~ipv~prGgGts~~G~~~--~~~ggivIdl~~mn~I~~id~~~~~vtVeaGv~~~~L~ 212 (555)
T PLN02805 135 DVVVFPRSEEEVSKIVKSCNKYKVPIVPYGGATSIEGHTL--APHGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELN 212 (555)
T ss_pred CEEEEcCCHHHHHHHHHHHHHCCCcEEEECCCCCCCCCcc--CCCCEEEEEccCCCCeEEEeCCCCEEEEeCCcCHHHHH
Confidence 3578899999988877643 2 3567789998842110 01236899998876666666677889999999999999
Q ss_pred HHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccccc
Q 000657 347 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392 (1370)
Q Consensus 347 ~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a 392 (1370)
+.|++.--.++ . .+. ..+||||+|++.
T Consensus 213 ~~L~~~Gl~~p--------~---------~p~--~~~TIGG~ia~n 239 (555)
T PLN02805 213 EYLEPYGLFFP--------L---------DPG--PGATIGGMCATR 239 (555)
T ss_pred HHHHHcCCEeC--------C---------CCc--cccChhhHhhCC
Confidence 98765322211 0 111 347999999865
No 99
>TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit. This model represents the NqrF subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=91.14 E-value=0.24 Score=60.68 Aligned_cols=50 Identities=30% Similarity=0.462 Sum_probs=40.3
Q ss_pred eEEEEEECC-EEEEeccCCCCCcHHHHHhhCCCCccccCCCC-CCCCceEEEEc
Q 000657 19 KEAILYVNG-LRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGE-GGCGACTVMVS 70 (1370)
Q Consensus 19 ~~i~~~~Ng-~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~-G~CGaCtV~~~ 70 (1370)
..|++++|| +..+++ +.++++||+.+++.|+. ....|+. |.||.|.|.+.
T Consensus 30 ~~v~v~~~~~~~~~~~-~~~g~tlL~a~~~~gi~-i~~~C~g~G~Cg~C~v~v~ 81 (405)
T TIGR01941 30 GDITIGINDDEEKSIT-VPAGGKLLNTLASNGIF-ISSACGGGGTCGQCRVRVV 81 (405)
T ss_pred ccEEEEEcCCCceEEE-ECCCChHHHHHHHcCCC-CcccCCCccEeCCCEEEEc
Confidence 458899985 444554 67899999999988875 6788995 89999999885
No 100
>COG3383 Uncharacterized anaerobic dehydrogenase [General function prediction only]
Probab=90.02 E-value=0.59 Score=58.92 Aligned_cols=94 Identities=20% Similarity=0.327 Sum_probs=71.9
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCC-----ccccCCCCCCCCceEEEEccccccCCcccceeecccccchhc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLT-----GTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYS 93 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~-----g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 93 (1370)
..|+++|||+.+++ ++++|+|++|.+.|+- -.+.-=.-|.|-.|.|-+|| +.+.||-+++
T Consensus 4 ~~i~vtidg~~~~v---~~G~tiL~a~~~~gI~iP~iCy~~~l~pi~sCd~ClVEidG----------~l~rsCsT~v-- 68 (978)
T COG3383 4 KMITVTIDGRSIEV---EEGTTILRAANRNGIEIPHICYHESLGPIGSCDTCLVEIDG----------KLVRSCSTPV-- 68 (978)
T ss_pred eeEEEEECCeEEec---CCChHHHHHHHhcCCcccceeccCCCCcccccceEEEEecC----------ceeccccccc--
Confidence 46899999998865 4899999999875544 33444456899999999996 6899999997
Q ss_pred cCCcEEEEeccccCCCCCCCHH----HHHHHHcCCCCCCCCChH
Q 000657 94 LEGMHVITVEGVGNRKHGLHPI----QESLVRSHGSQCGFCTPG 133 (1370)
Q Consensus 94 ~~g~~i~TvEgl~~~~~~~~~i----q~a~~~~~~~qCG~CtpG 133 (1370)
.+|+.|.|-. +.+..+ -+.+...|-.-|--|--+
T Consensus 69 ~dGm~v~t~s------~rvk~~r~~~md~~l~nH~LyC~vCd~n 106 (978)
T COG3383 69 EDGMVVRTNS------ERVKEARREAMDRILSNHPLYCTVCDNN 106 (978)
T ss_pred cCCcEEeccc------HHHHHHHHHHHHHHHhcCCcCccccCCC
Confidence 4899999843 233334 456778899999888766
No 101
>COG1034 NuoG NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [Energy production and conversion]
Probab=89.49 E-value=0.72 Score=59.32 Aligned_cols=95 Identities=24% Similarity=0.426 Sum_probs=69.9
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccc----cCCC-CCCCCceEEEEccccccCCcccceeecccccchhcc
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTK----LGCG-EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL 94 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k----~gC~-~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~ 94 (1370)
+++++|||++++++ .+.|||+..|+.|+.=.. .+|+ -|.|.-|.|-+++.. +++.||.+|+ -
T Consensus 1 m~tI~IDG~ei~v~---~g~tvLqAa~~aGi~IP~fCyh~~ls~~GaCRmClVEveg~~--------k~~~SC~tpv--~ 67 (693)
T COG1034 1 MVTITIDGKEIEVP---EGETVLQAAREAGIDIPTFCYHPRLSIAGACRMCLVEVEGAP--------KLVASCATPV--T 67 (693)
T ss_pred CeEEEECCEEEecC---CCcHHHHHHHHcCCCCCcccccCCCCcccceeEEEEEecCCC--------cccccccccc--C
Confidence 36799999998764 788999999987654332 3455 599999999998622 6899999964 4
Q ss_pred CCcEEEEeccccCCCCC----CCHHHHHHHHcCCCCCCCCChH
Q 000657 95 EGMHVITVEGVGNRKHG----LHPIQESLVRSHGSQCGFCTPG 133 (1370)
Q Consensus 95 ~g~~i~TvEgl~~~~~~----~~~iq~a~~~~~~~qCG~CtpG 133 (1370)
+|+.|-| +.+. -+-|-+.+.-+|-.=|+-|--|
T Consensus 68 dGM~I~T------~s~~vk~~R~~vmE~LLiNHPlDCpiCD~g 104 (693)
T COG1034 68 DGMVIST------NSEEVKKAREGVMEFLLINHPLDCPVCDKG 104 (693)
T ss_pred CCeEEec------CCHHHHHHHHHHHHHHHhcCCCCCCccCCC
Confidence 8988765 2222 2456667777888888888654
No 102
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=88.95 E-value=13 Score=49.43 Aligned_cols=191 Identities=14% Similarity=0.130 Sum_probs=111.1
Q ss_pred CCCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe-------cccCCCCCCCCccchHHHH
Q 000657 781 YLEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT-------KRIGGGFGGKETRSAFIAA 848 (1370)
Q Consensus 781 ~mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~-------~~vGGgFGgK~~~~~~~~~ 848 (1370)
.++...+....+ .||.++|++++.-. ..+...+|+.||+|.++|+|+. ++-+|.||++.+...-.++
T Consensus 457 ~~~~~~a~v~i~-~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av 535 (759)
T PRK09970 457 GLEIAGARLLMN-QDGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQSYVAGPAI 535 (759)
T ss_pred CCCcceEEEEEc-cCceEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhHHHHHHHH
Confidence 366778888887 58999999998544 5667899999999999999983 4667888888663222111
Q ss_pred HH----------HHHHHcCCCCE---EE-----E--------eChHHHHhhc-C--------------------CCccEE
Q 000657 849 AA----------AVPSFLLNRPV---NL-----T--------LDRDIDMMIS-G--------------------QRHSFL 881 (1370)
Q Consensus 849 ~a----------AlaA~~~gRPV---kl-----~--------~sR~E~~~~~-~--------------------~R~~~~ 881 (1370)
.- .++|..++-++ .+ . .+-. ++... . .-.-.-
T Consensus 536 ~~Aa~~lr~~l~~~aa~~l~~~~~~l~~~~G~v~~~~~~~~~~~~~-~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a 614 (759)
T PRK09970 536 RKAALELKEKILAHAAVMLHQSAMNLDIIDGHIVVKRPGEPLMSLE-ELAMDAYYHPERGGQITAESSIKTTTNPPAFGC 614 (759)
T ss_pred HHHHHHHHHHHHHHHHHHhCCChHHEEEECCEEEECCCCCccccHH-HHHHHhhccccCCCceeEEEEecCCCCCCceEE
Confidence 11 01233333222 01 0 0000 01100 0 011233
Q ss_pred EEEEEeeC-CCCcEEEEEEEEEecCCCCCCchH--HHHH----HHhhc-------c-----------CCCcccCeE----
Q 000657 882 GKYKVGFT-NEGKVLALDLEIYNNAGNSLDLSL--AVLE----RAMFH-------S-----------DNVYEIPNV---- 932 (1370)
Q Consensus 882 ~~~k~g~~-~dG~i~a~~~~~~~d~Ga~~~~~~--~v~~----~~~~~-------~-----------~~~Y~ipn~---- 932 (1370)
.-.++-+| ..|++.=+++....|+|-..+... +.+. +++.. . ..-|.+|..
T Consensus 615 ~~aeVeVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~qGiG~aL~E~~~~d~~~G~~~~~~~~dY~ip~~~d~P 694 (759)
T PRK09970 615 TFVDVEVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDEKTGVVRNPNLLDYKLPTMMDLP 694 (759)
T ss_pred EEEEEEEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHHHHHHHHhcceeEEcCCCCeECCCChhhccCCCcccCC
Confidence 44556777 579999999999999997655210 0010 11100 0 112444332
Q ss_pred EEEEEEEeCCCCCCCc--cCCCChhhhHHHHHHHHHHHHHHhCC
Q 000657 933 RIMGNVCFTNFPSNTA--FRGFGGPQGMLITENWIQRVAVEVRK 974 (1370)
Q Consensus 933 r~~~~~v~TN~~p~ga--~Rg~G~~q~~fa~E~~mDelA~~lg~ 974 (1370)
.++...+.++.++ +. -+|.|.+...-+.=.+.+.+++.+|.
T Consensus 695 ~i~v~~ve~~~~~-~p~GaKgvGE~~~~~~~~AIanAi~~A~G~ 737 (759)
T PRK09970 695 QLESAFVEIYEPQ-SAYGHKSLGEPPIISPAPAIRNAVLMATGV 737 (759)
T ss_pred CeEEEEEecCCCC-CCCCCcccCCCcccchHHHHHHHHHHhhCC
Confidence 3555666676543 44 67788887776666777777878875
No 103
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=87.96 E-value=1.3 Score=52.98 Aligned_cols=93 Identities=11% Similarity=0.061 Sum_probs=58.5
Q ss_pred HHHHHHHhhCC-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHHHHhhhcCCC
Q 000657 280 QHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPA 358 (1370)
Q Consensus 280 ~e~l~ll~~~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~i~~~~~ 358 (1370)
.++++...++. ..++.+|||....-. .....+||++++.....+..++..++++|++++.+|.+.|.+.-..++
T Consensus 8 ~~~v~~A~~~~~~v~~~GgGt~~~~g~----~~~~~vldl~~ln~Ile~d~~~~~vtV~AG~~l~el~~~L~~~G~~lp- 82 (352)
T PRK11282 8 LERVRQAAADGTPLRIRGGGSKDFYGR----ALAGEVLDTRAHRGIVSYDPTELVITARAGTPLAELEAALAEAGQMLP- 82 (352)
T ss_pred HHHHHHHHHCCCeEEEECCCCCCCCCC----CCCCeEEEcccCCCcEEEcCCCCEEEECCCCCHHHHHHHHHHcCCeeC-
Confidence 34444444443 367888887532211 112458999987666566667788999999999999998765322211
Q ss_pred CccchHHHHHHHHHHhcccccccccccccccccc
Q 000657 359 HETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392 (1370)
Q Consensus 359 ~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a 392 (1370)
+--+.....+||||+|++.
T Consensus 83 ---------------~~p~~~~~~~TIGG~iatg 101 (352)
T PRK11282 83 ---------------FEPPHFGGGATLGGMVAAG 101 (352)
T ss_pred ---------------CCCCCcCCCcEehhHHhcC
Confidence 1111233358999999875
No 104
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=86.83 E-value=10 Score=50.20 Aligned_cols=59 Identities=10% Similarity=0.179 Sum_probs=46.5
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEecc------cCCCCCCCCc
Q 000657 782 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTKR------IGGGFGGKET 841 (1370)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~~------vGGgFGgK~~ 841 (1370)
..+..+....+ .||.++|+++++.. ..++..+|+.||+|.++|+|.... -+|.+|++.+
T Consensus 442 ~~~~~a~v~l~-~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t 511 (746)
T TIGR03194 442 EPHATVALKLD-FDGGITLLTGAADIGQGSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVT 511 (746)
T ss_pred CCCceEEEEEc-CCccEEEEEcCCCCCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHH
Confidence 34567777776 58899999988655 566889999999999999998654 5677777765
No 105
>KOG2282 consensus NADH-ubiquinone oxidoreductase, NDUFS1/75 kDa subunit [Energy production and conversion]
Probab=86.27 E-value=1.2 Score=53.74 Aligned_cols=101 Identities=22% Similarity=0.409 Sum_probs=75.8
Q ss_pred ceEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCC-----CCCCCCceEEEEccccccCCcccceeecccccchh
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGC-----GEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLY 92 (1370)
Q Consensus 18 ~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC-----~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 92 (1370)
.+.|..+|+|+.+.+ +|++|+|..--..|..-.+.-- -.|.|--|.|.|.+.. ++|.||-||+
T Consensus 30 ~~~ievfvd~~~v~v---~pg~tvlqac~~~gv~iprfcyh~rlsvagncrmclveveksp--------kpva~campv- 97 (708)
T KOG2282|consen 30 PNKIEVFVDDQSVMV---EPGTTVLQACAKVGVDIPRFCYHERLSVAGNCRMCLVEVEKSP--------KPVAACAMPV- 97 (708)
T ss_pred ccceEEEECCeeEee---CCCcHHHHHHHHhCCCcchhhhhhhhhhccceeEEEEEeccCC--------Ccchhhcccc-
Confidence 478999999998875 4999999876433544333321 2489999999998632 7899999996
Q ss_pred ccCCcEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChH
Q 000657 93 SLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPG 133 (1370)
Q Consensus 93 ~~~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG 133 (1370)
+.|+.|.|=--+. +..-.-+-+-|.-+|-.-|.-|.-|
T Consensus 98 -m~g~~iktns~~~--kkaregvmefll~nhpldcpicdqg 135 (708)
T KOG2282|consen 98 -MKGWKIKTNSDKS--KKAREGVMEFLLMNHPLDCPICDQG 135 (708)
T ss_pred -cCCceeecCchHH--HHHHHHHHHHHHhCCCCCCCccCCC
Confidence 6899999865554 2233557888889999999999776
No 106
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=86.16 E-value=16 Score=49.68 Aligned_cols=191 Identities=13% Similarity=0.042 Sum_probs=110.0
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCccchHHHHHH
Q 000657 782 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKETRSAFIAAAA 850 (1370)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFGgK~~~~~~~~~~a 850 (1370)
+++..+....+ .||.++|+++++.. ..+...+|+.||+|.++|+|+.. +-+|.||++.+...--++..
T Consensus 658 ~~~~~a~v~l~-~dG~v~v~~g~~e~GqG~~T~~~QiaAe~LGvp~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~ 736 (951)
T TIGR03313 658 IDQANCMIKLE-SDGTFIVHSGGADIGTGLDTVVSKLTAEVLHCPMDDVHVISGDTDHALFDKGAYASSGTCFSGNAAKR 736 (951)
T ss_pred CCCccEEEEEc-CCceEEEEECCCCCCccHHHHHHHHHHHHHCCCHHhEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 45667777776 58999999999855 66788999999999999999864 44788888866322211111
Q ss_pred ----------HHHHHcCCCCE---EEE-----------eChHHH------------HhhcC-CCc------cEEEEEEEe
Q 000657 851 ----------AVPSFLLNRPV---NLT-----------LDRDID------------MMISG-QRH------SFLGKYKVG 887 (1370)
Q Consensus 851 ----------AlaA~~~gRPV---kl~-----------~sR~E~------------~~~~~-~R~------~~~~~~k~g 887 (1370)
.++|..++.|. .+. ++-.+- ....+ +++ -...-.++-
T Consensus 737 Aa~~l~~kl~~~aa~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVe 816 (951)
T TIGR03313 737 AAENLREKILFHGAEMLGEPVADVDLAAPGLVRGKTGEVSYFDIAHKAETGTGFGQLVGTGSYITSEFAFPYGANFAEVA 816 (951)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhccCCCCCeEEEEEecCCCCCccceeEEEEEE
Confidence 11233333222 111 011110 00001 011 122345677
Q ss_pred eCC-CCcEEEEEEEEEecCCCCCCchH--HHHH----HHhh-----------------ccCCCcccCeE-----EEEEEE
Q 000657 888 FTN-EGKVLALDLEIYNNAGNSLDLSL--AVLE----RAMF-----------------HSDNVYEIPNV-----RIMGNV 938 (1370)
Q Consensus 888 ~~~-dG~i~a~~~~~~~d~Ga~~~~~~--~v~~----~~~~-----------------~~~~~Y~ipn~-----r~~~~~ 938 (1370)
+|. .|++.=+++....|+|-..+... +.+. +++. ....-|.+|.. .++...
T Consensus 817 VD~~TG~vkv~r~~~~~D~G~~INP~~v~gQieGg~~qGiG~AL~Ee~~~d~~G~~~~~~l~~Y~iPt~~D~P~~~~v~~ 896 (951)
T TIGR03313 817 VNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATMRAIGHSMTEEIVYDDNGIPLTRDLKSYGAPKIGDIPRDFRAVL 896 (951)
T ss_pred EECCCCcEEEEEEEEEEECCcccCHHHHHHHHHHHHHHHHHHHHhCCcEECCCCcCCCCChhhCCCCChHhCCCceEEEE
Confidence 775 59999999999999997654210 0010 0110 01123544432 255556
Q ss_pred EeCCCCCCCc--cCCCChhhhHHHHHHHHHHHHHHhCC
Q 000657 939 CFTNFPSNTA--FRGFGGPQGMLITENWIQRVAVEVRK 974 (1370)
Q Consensus 939 v~TN~~p~ga--~Rg~G~~q~~fa~E~~mDelA~~lg~ 974 (1370)
+.++.+ .++ -+|.|.+...-+.=.+.+.+++.+|.
T Consensus 897 ve~~~~-~~p~GaKGiGE~~~~~~apAIanAI~dA~G~ 933 (951)
T TIGR03313 897 VPSDDK-VGPYGAKSISEIGVNGAAPAIATAIHDACGV 933 (951)
T ss_pred EcCCCC-CCCCCCcccCCCcccchHHHHHHHHHHHhCc
Confidence 666644 444 45788877776666777777777774
No 107
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=85.71 E-value=9.8 Score=51.12 Aligned_cols=183 Identities=14% Similarity=0.097 Sum_probs=100.9
Q ss_pred CCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCccchHHHHHHHH
Q 000657 784 PHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKETRSAFIAAAAAV 852 (1370)
Q Consensus 784 p~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFGgK~~~~~~~~~~aAl 852 (1370)
+..++.... ||.++|+++++.. ..+...+|+.||+|.++|+|... +-+|.+|++.+... ..++-.
T Consensus 594 ~~~~~~~~~--DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~aSR~t~~~--G~Av~~ 669 (848)
T TIGR03311 594 TGRCNLAVE--DGKVHIRTSAACIGQGLGTVLTQIVCETTGLPPEVIVCELPDTALTPDSGTTTASRQSLFT--GEATRR 669 (848)
T ss_pred cceEEEEEc--CCEEEEEECCCCcCcCHHHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCchhhHHHHH--HHHHHH
Confidence 345566554 7899999998665 45678889999999999999864 45777888866322 222222
Q ss_pred HHHcCCCCE------EE----EeCh----HHHHhhcC-CCcc-E---EEEEEEeeCCCCcEEEEEEEEEecCCCCCCchH
Q 000657 853 PSFLLNRPV------NL----TLDR----DIDMMISG-QRHS-F---LGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSL 913 (1370)
Q Consensus 853 aA~~~gRPV------kl----~~sR----~E~~~~~~-~R~~-~---~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~ 913 (1370)
+|.++++=+ .+ .... .+.+...+ ...+ + ..-.-+-++..|+|+ ++....|.|-..+...
T Consensus 670 Aa~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVd~tG~v~--r~~~v~D~G~vINP~~ 747 (848)
T TIGR03311 670 AAAKLKEALRGRTLAELEGEEFYGEYHSITDPLNSDKENPVSHVGYGYATQVVILDDAGKVE--KVVAAYDVGRAINPLN 747 (848)
T ss_pred HHHHHHHHHHhcCHHHcCCCEEeeccccccCcceeeccCCCCccccceEEEEEEECCCCeEE--EEEEEEeCCccCCHHH
Confidence 333332110 00 0000 00011101 0101 0 111122346789877 8888899997654211
Q ss_pred --HHHH----HHhh---------------------ccCCCcccCeEEEEEEEEeCCCCCCCc--cCCCChhhhHHHHHHH
Q 000657 914 --AVLE----RAMF---------------------HSDNVYEIPNVRIMGNVCFTNFPSNTA--FRGFGGPQGMLITENW 964 (1370)
Q Consensus 914 --~v~~----~~~~---------------------~~~~~Y~ipn~r~~~~~v~TN~~p~ga--~Rg~G~~q~~fa~E~~ 964 (1370)
+.+. +++. .++..-++|.+++ ..+.++.+ .++ .+|.|.+...-+.=.+
T Consensus 748 veGQieGG~~qGlG~AL~Ee~~~d~G~~~~~~~dY~iPt~~D~P~i~v--~~ve~~~~-~~p~GaKGvGE~~~~~~~~AI 824 (848)
T TIGR03311 748 LEGQIEGGIVMGLGYALTEDFPLREGIPTAKFGTLGLFRSTQVPEIET--HLIEKNGT-PLAYGAKGVGELATIPTAPAV 824 (848)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEecCCeecCChhhccCCChhhCCCeEE--EEEeCCCC-CCCCCCccCCCCcccchHHHH
Confidence 0111 0110 1112236665544 45555533 343 5788888888888888
Q ss_pred HHHHHHHhCCC
Q 000657 965 IQRVAVEVRKS 975 (1370)
Q Consensus 965 mDelA~~lg~D 975 (1370)
.+.+++.+|.-
T Consensus 825 anAV~~A~G~r 835 (848)
T TIGR03311 825 AGAYYRFDGKF 835 (848)
T ss_pred HHHHHHhHCcC
Confidence 88899999864
No 108
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=84.85 E-value=2.5 Score=48.34 Aligned_cols=143 Identities=13% Similarity=0.183 Sum_probs=85.0
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEccccc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVR 341 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vT 341 (1370)
++.+++ .-.-|+.|.+.+ + .-...++.+|+-+.+.-. . ...+| + ..+++.++.+++.|+.||++.
T Consensus 12 t~~iGG-~A~~~~~~~~~~-l------~~p~~vlG~GSNlLv~D~--g--~~~vv-~--~~~~~~~~~~~~~v~~~AG~~ 76 (257)
T PRK13904 12 SVKIGP-PLEVLVLEEIDD-F------SQDGQIIGGANNLLISPN--P--KNLAI-L--GKNFDYIKIDGECLEIGGATK 76 (257)
T ss_pred ceeECc-eEEEEEEechhh-h------CCCeEEEeceeEEEEecC--C--ccEEE-E--ccCcCeEEEeCCEEEEEcCCc
Confidence 355665 334567787777 4 224778999999888433 1 24455 2 234677777888999999999
Q ss_pred HHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCC-CCChhHHHHhcCCEEEEEeCCCCeE
Q 000657 342 LTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP-ISDLNPLWMASGAKFHIVDCKGNIR 419 (1370)
Q Consensus 342 l~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp-~sD~~p~L~al~A~v~i~s~~g~~R 419 (1370)
+.++.....+. .+ .-++..++.+ |||||-+. ||.- -.++.=.|. +|++.+ +
T Consensus 77 l~~l~~~~~~~--gl------------~GlE~l~gIP----GtVGGAv~mNaGa~g~ei~d~l~----~V~~~~--~--- 129 (257)
T PRK13904 77 SGKIFNYAKKN--NL------------GGFEFLGKLP----GTLGGLVKMNAGLKEYEISNNLE----SICTNG--G--- 129 (257)
T ss_pred HHHHHHHHHHC--CC------------chhhhhcCCC----ccHHHHHHhcCCcCccchheeEE----EEEEEe--e---
Confidence 99999874331 11 1233344444 78888884 4432 122222222 123332 2
Q ss_pred EEehhHhhcccccccCCCCeEEEEEEccC
Q 000657 420 TTMAEEFFLGYRKVDLTSGEILLSIFLPW 448 (1370)
Q Consensus 420 ~vpl~dF~~g~~~~~L~~~Eil~~I~iP~ 448 (1370)
+++-+|..-+||.+.++ .||+++.+-.
T Consensus 130 ~~~~~e~~f~YR~S~~~--~iIl~a~f~l 156 (257)
T PRK13904 130 WIEKEDIGFGYRSSGIN--GVILEARFKK 156 (257)
T ss_pred EEeHHHCcccccCcCCC--cEEEEEEEEE
Confidence 57778877788887775 2555554443
No 109
>PLN02441 cytokinin dehydrogenase
Probab=84.46 E-value=7.7 Score=48.93 Aligned_cols=156 Identities=12% Similarity=0.056 Sum_probs=87.2
Q ss_pred ceEEecCCHHHHHHHHhhCC----C--cEEEeccCcceeeeeecccccceEEecCCccc------ccceeecCCcEEEcc
Q 000657 271 LKWYRPLKLQHLLELKSKYP----D--SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPE------LNVLNVKDDGLEIGA 338 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~----~--a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~E------L~~I~~~~~~l~IGA 338 (1370)
...++|+|.+|+.++++... . .+..+||+++.-. ......++||++++.. ...+..+...+++||
T Consensus 66 ~aVv~P~S~eDVa~iVr~A~~~~~~~~V~~rGgGHS~~G~---a~~~~GivIdms~Ln~i~~~~~ii~vd~~~~~VtV~a 142 (525)
T PLN02441 66 AAVLYPSSVEDIASLVRAAYGSSSPLTVAARGHGHSLNGQ---AQAPGGVVVDMRSLRGGVRGPPVIVVSGDGPYVDVSG 142 (525)
T ss_pred CEEEeCCCHHHHHHHHHHHhhccCCceEEEECCCcCCCCC---ccCCCeEEEECCCCCCcCccCceEEEcCCCCEEEEcC
Confidence 46789999999999887652 2 3456788776431 1122468999998766 233444567899999
Q ss_pred cccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC--CCChhHHHHhcCCEEEEEeCCC
Q 000657 339 AVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP--ISDLNPLWMASGAKFHIVDCKG 416 (1370)
Q Consensus 339 ~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp--~sD~~p~L~al~A~v~i~s~~g 416 (1370)
++++.++.+.+.+. .+. ..+..=-+..|+||+|.++.- .+=-.-.+...=-.++++..+|
T Consensus 143 G~~~~dv~~~l~~~--Gla----------------P~~~~d~~~~TVGG~ist~G~gg~s~ryG~~~d~Vl~leVVtadG 204 (525)
T PLN02441 143 GELWIDVLKATLKH--GLA----------------PRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLELDVVTGKG 204 (525)
T ss_pred CCCHHHHHHHHHHC--CCc----------------cCCccccCceEEeEEcCCCCccccccccCcHHHhEEEEEEEeCCc
Confidence 99999988764331 000 011111234699999998421 1101111111112355666666
Q ss_pred CeEEEeh---hHhhcccccccCCCCeEEEEEEccC
Q 000657 417 NIRTTMA---EEFFLGYRKVDLTSGEILLSIFLPW 448 (1370)
Q Consensus 417 ~~R~vpl---~dF~~g~~~~~L~~~Eil~~I~iP~ 448 (1370)
..++..- .|.|..-+- .+..=-||+++.|..
T Consensus 205 evv~~s~~~n~DLF~Av~G-glG~fGIIT~atlrL 238 (525)
T PLN02441 205 EVVTCSPTQNSDLFFAVLG-GLGQFGIITRARIAL 238 (525)
T ss_pred eEEEeCCCCChhHHHhhcc-CCCCcEEEEEEEEEE
Confidence 4444433 244442211 122225788877754
No 110
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=83.01 E-value=24 Score=47.10 Aligned_cols=61 Identities=15% Similarity=0.113 Sum_probs=45.0
Q ss_pred CCceeEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhh
Q 000657 1052 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDI 1123 (1370)
Q Consensus 1052 ~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~ 1123 (1370)
+...++....+.||+++|.++++. . ..+...+|+.||+|.++|+|.. |+-+|.+|++....
T Consensus 182 mEp~~~~A~~~~~g~l~v~~stQ~----p-~~~r~~lA~~Lglp~~~VrV~~------~~vGGgFG~K~~~~ 242 (768)
T TIGR03196 182 LAPEAALAMPAADGGFDLRAATQH----G-HKDREQIAACFDIPEEKIRITL------AGMGGAFGGKDDLN 242 (768)
T ss_pred cCCceEEEEEcCCCCEEEEECCCc----h-HHHHHHHHHHhCCCHHHEEEEe------CCCCCccCCccccc
Confidence 344556666667899999988644 2 3456788899999999999984 45678888886543
No 111
>PLN02906 xanthine dehydrogenase
Probab=80.22 E-value=39 Score=47.77 Aligned_cols=191 Identities=12% Similarity=0.128 Sum_probs=106.8
Q ss_pred CCceeEEEEEecC-CcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhh--HHHHH
Q 000657 1052 MNQAGALVHVYTD-GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDI--YGAAV 1128 (1370)
Q Consensus 1052 ~~~~~a~V~l~~D-GsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~--~g~Av 1128 (1370)
+...++....+.| |.++|+++++.. ..+...+|+.||||.++|+|. .|.-+|.+|++.+.. ..-++
T Consensus 740 mEp~~~~A~~~~~~g~l~v~~sTQ~p-----~~~r~~vA~~Lgip~~kVrV~------~~~vGGgFGgK~~~~~~~~~~a 808 (1319)
T PLN02906 740 LEPNSSLVWTSDSGNEVHMISSTQAP-----QKHQKYVAHVLGLPMSKVVCK------TKRIGGGFGGKETRSAFIAAAA 808 (1319)
T ss_pred cCCCeEEEEEeCCCCEEEEEECCcCH-----HHHHHHHHHHhCCChHHeEEE------eCCcccCccccccccchHHHHH
Confidence 4445566666667 689999886543 456778999999999999998 445678888887632 22333
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCc
Q 000657 1129 LDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGD 1208 (1370)
Q Consensus 1129 ~~Ac~~L~~rl~~~a~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~ 1208 (1370)
..|+.++++ +++=. .+-+|-. ... +...+ + .+=.++-+|. .|+
T Consensus 809 AlaA~~~gR---PVkl~---~sReE~~----------~~~--------------~~R~~-----~-~~~~k~g~~~-dG~ 851 (1319)
T PLN02906 809 AVPAYLLNR---PVKLT---LDRDVDM----------MIT--------------GQRHA-----F-LGKYKVGFTN-EGK 851 (1319)
T ss_pred HHHHHHhCC---CEEEE---ecHHHHh----------hhc--------------CCccc-----e-EEEEEEEECC-CCC
Confidence 444444421 11000 0111100 000 00001 1 1233566774 699
Q ss_pred EEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEE
Q 000657 1209 FHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSL 1288 (1370)
Q Consensus 1209 v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~ 1288 (1370)
+.=+++.+..|.|-..+.... ++..+... ...-|++|.. .++...
T Consensus 852 I~a~~~~~~~d~Ga~~~~~~~--------v~~~~~~~----------------------~~~~Y~ipn~-----~~~~~~ 896 (1319)
T PLN02906 852 ILALDLEIYNNGGNSLDLSGA--------VLERAMFH----------------------SDNVYEIPNV-----RIVGNV 896 (1319)
T ss_pred EEEEEEEEEecCcccCCcchH--------HHHHHHHh----------------------cCCCccCcce-----EEEEEE
Confidence 999999999999988654211 11111100 0123666632 244455
Q ss_pred eecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCC
Q 000657 1289 LKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHT 1333 (1370)
Q Consensus 1289 ~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~ 1333 (1370)
+.+...|.+.| +|.|.+-. .+|+..++..+..++|++
T Consensus 897 v~TN~~~~ga~--RG~G~pq~------~fa~E~~mD~lA~~lG~D 933 (1319)
T PLN02906 897 CFTNFPSNTAF--RGFGGPQG------MLITENWIQRIAVELNKS 933 (1319)
T ss_pred EECCCCCCCcc--cCCCHHHH------HHHHHHHHHHHHHHhCcC
Confidence 55412234443 57666544 578888888877667764
No 112
>PLN00192 aldehyde oxidase
Probab=78.78 E-value=46 Score=47.12 Aligned_cols=59 Identities=20% Similarity=0.127 Sum_probs=45.0
Q ss_pred CCceeEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhh
Q 000657 1052 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASS 1121 (1370)
Q Consensus 1052 ~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t 1121 (1370)
+...++....+.||.++|+++++. . +.+...+|+.||||.++|+|.. +.-+|.+|++.+
T Consensus 761 mEp~~~vA~~~~dg~l~V~~sTQ~----p-~~~r~~vA~~Lgip~~~VrV~~------~~vGGgFGgK~~ 819 (1344)
T PLN00192 761 METQTALALPDEDNCIVVYSSTQC----P-EYVHSVIARCLGIPEHNVRVIT------RRVGGGFGGKAV 819 (1344)
T ss_pred ccCceEEEEEcCCCCEEEEECCCC----H-HHHHHHHHHHhCCChHHEEEEe------cccccCCCcccc
Confidence 445566777777899999988543 2 4567788999999999999984 456788888854
No 113
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form. This model describes the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members are share the same function. The model is designated as subfamily rather than equivalog for this reason.Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=69.71 E-value=9.8 Score=52.18 Aligned_cols=80 Identities=19% Similarity=0.104 Sum_probs=57.5
Q ss_pred cceEEEEEECCEEEEeccCCCCCcHHHHHhhCC--C--Cccc----cC--CCCCCCCceEEEEccccccCCcccceeecc
Q 000657 17 WTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIG--L--TGTK----LG--CGEGGCGACTVMVSRYDKKSKKCVHCAVNA 86 (1370)
Q Consensus 17 ~~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~--l--~g~k----~g--C~~G~CGaCtV~~~~~~~~~~~~~~~~v~s 86 (1370)
.+..|+|++||++++. .++.||..-|-..| + ++.| .| |..|.|--|.|.||+-. .+. .-+++
T Consensus 9 ~~~~~~~~~dg~~~~~---~~g~t~a~al~a~g~~~~~~s~~~~~prg~~c~~~~~~~c~v~i~~~~--~~~---~~~~a 80 (985)
T TIGR01372 9 RSRPLRFTFDGKSYSG---FAGDTLASALLANGVHLVGRSFKYHRPRGILTAGVEEPNALVTVGSGA--QRE---PNTRA 80 (985)
T ss_pred CCCeEEEEECCEEeec---CCCCHHHHHHHhCCCeeecccCCCCCCCcccccCccCCCeEEEECCCc--CCC---CCccc
Confidence 3568999999999875 48999998775422 2 2233 33 98888999999998510 000 23789
Q ss_pred cccchhccCCcEEEEecccc
Q 000657 87 CLAPLYSLEGMHVITVEGVG 106 (1370)
Q Consensus 87 Cl~~~~~~~g~~i~TvEgl~ 106 (1370)
|++++. +|..|.|.-+..
T Consensus 81 c~~~~~--~gm~~~~~~~~~ 98 (985)
T TIGR01372 81 TTQELY--DGLVATSQNRWP 98 (985)
T ss_pred eeEEcc--cCCEEecccCCC
Confidence 999974 899999987754
No 114
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=68.05 E-value=11 Score=50.33 Aligned_cols=70 Identities=16% Similarity=0.203 Sum_probs=50.5
Q ss_pred CeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCccchHHHHHHHHH
Q 000657 785 HSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKETRSAFIAAAAAVP 853 (1370)
Q Consensus 785 ~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFGgK~~~~~~~~~~aAla 853 (1370)
..+.+..+ .||.++|+++++.. ..+...+|+.||+|.++|+|... +-+|.||++.+.. ...++-.+
T Consensus 476 ~~a~v~l~-~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~--~G~Av~~A 552 (770)
T TIGR02416 476 DSCEIRIH-PTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRSTPV--AGAATALA 552 (770)
T ss_pred ceEEEEEC-CCceEEEEECCCCCCCCchHHHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHHHH--HHHHHHHH
Confidence 45667776 48899999998765 56678999999999999999854 4467888886632 22333344
Q ss_pred HHcC
Q 000657 854 SFLL 857 (1370)
Q Consensus 854 A~~~ 857 (1370)
|.++
T Consensus 553 a~~l 556 (770)
T TIGR02416 553 ARKI 556 (770)
T ss_pred HHHH
Confidence 5555
No 115
>PRK07440 hypothetical protein; Provisional
Probab=65.31 E-value=9.2 Score=34.81 Aligned_cols=29 Identities=24% Similarity=0.408 Sum_probs=24.2
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhCCCC
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLT 51 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~ 51 (1370)
.|.++|||+++++. ..+||.++|++.++.
T Consensus 4 ~m~i~vNG~~~~~~---~~~tl~~lL~~l~~~ 32 (70)
T PRK07440 4 PITLQVNGETRTCS---SGTSLPDLLQQLGFN 32 (70)
T ss_pred ceEEEECCEEEEcC---CCCCHHHHHHHcCCC
Confidence 58899999998764 679999999987664
No 116
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=65.15 E-value=21 Score=45.62 Aligned_cols=55 Identities=24% Similarity=0.217 Sum_probs=38.0
Q ss_pred CCceeEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCcc
Q 000657 1052 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAA 1117 (1370)
Q Consensus 1052 ~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~ 1117 (1370)
+...++....+.||.++|.++++. -..+...+|+.||||+++|+|.. |.-+|.+|
T Consensus 48 mEp~~~~A~~~~~g~l~v~~~tQ~-----p~~~r~~va~~lglp~~~V~V~~------~~~GGgFG 102 (547)
T PF02738_consen 48 MEPHGAVAWWDEDGRLTVWSSTQW-----PFHVRRAVAEALGLPPEKVRVIS------PYVGGGFG 102 (547)
T ss_dssp SS-SEEEEEEETTTEEEEEES-SS-----HHHHHHHHHHHHTS-GGGEEEEE------SB-S--TT
T ss_pred CCCCeEEEEEccCCCEEEEECCcC-----HhHHHHHHhhhhcCChhHEEEee------eecCCCCC
Confidence 345567777778999999987543 34567888999999999999984 44566677
No 117
>PRK08053 sulfur carrier protein ThiS; Provisional
Probab=64.75 E-value=13 Score=33.29 Aligned_cols=38 Identities=13% Similarity=0.121 Sum_probs=28.2
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEcc
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
+.++|||+++++. ..+||.++|+..++.. . .|.|.+|+
T Consensus 1 m~i~vNg~~~~~~---~~~tl~~ll~~l~~~~--~--------~vaVavN~ 38 (66)
T PRK08053 1 MQILFNDQPMQCA---AGQTVHELLEQLNQLQ--P--------GAALAINQ 38 (66)
T ss_pred CEEEECCeEEEcC---CCCCHHHHHHHcCCCC--C--------cEEEEECC
Confidence 4689999999875 5789999998766542 1 16787774
No 118
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=63.05 E-value=17 Score=49.50 Aligned_cols=60 Identities=13% Similarity=0.086 Sum_probs=48.0
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCcc
Q 000657 782 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKETR 842 (1370)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFGgK~~~ 842 (1370)
+++..+....+ .||.++|+++++.. ..+...+|+.||+|.++|+|... .-+|.||++.+.
T Consensus 662 ~~~~~a~v~l~-~dGsv~v~~g~~e~GqG~~T~~~QiaAe~LGip~d~V~v~~~DT~~~p~~~gt~aSr~t~ 732 (956)
T PRK09800 662 IDQANCMIKLE-SDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTC 732 (956)
T ss_pred CCCceEEEEEC-CCceEEEEECCCCCCccHHHHHHHHHHHHHCCCceeEEEEeCCCCCCCCCCCcchhhhHH
Confidence 45566777776 48899999998855 56788999999999999999864 457888888764
No 119
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=60.41 E-value=17 Score=48.29 Aligned_cols=59 Identities=8% Similarity=0.134 Sum_probs=45.8
Q ss_pred CCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe------cccCCCCCCCCcc
Q 000657 783 EPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT------KRIGGGFGGKETR 842 (1370)
Q Consensus 783 Ep~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~------~~vGGgFGgK~~~ 842 (1370)
.+..+....+ .||+++|+++++.. ..+...+|+.||+|.++|+|.. +.-+|.+|++.+.
T Consensus 446 ~~~~a~v~i~-~dG~v~v~~g~~e~GQG~~T~laQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t~ 515 (758)
T TIGR02965 446 NQAGALVHVY-TDGSIHLNHGGTEMGQGLNTKVAQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGSD 515 (758)
T ss_pred CccceEEEEe-CCCcEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHHH
Confidence 3456677776 48899999998664 4567889999999999999985 4567778888653
No 120
>PRK05863 sulfur carrier protein ThiS; Provisional
Probab=60.02 E-value=11 Score=33.75 Aligned_cols=28 Identities=21% Similarity=0.303 Sum_probs=23.1
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCC
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLT 51 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~ 51 (1370)
++++|||+++++. +.+||.++|.+.++.
T Consensus 1 m~i~vNG~~~~~~---~~~tl~~ll~~l~~~ 28 (65)
T PRK05863 1 MIVVVNEEQVEVD---EQTTVAALLDSLGFP 28 (65)
T ss_pred CEEEECCEEEEcC---CCCcHHHHHHHcCCC
Confidence 4689999998764 679999999987664
No 121
>PRK06083 sulfur carrier protein ThiS; Provisional
Probab=59.31 E-value=15 Score=34.81 Aligned_cols=33 Identities=9% Similarity=0.069 Sum_probs=26.6
Q ss_pred CcceEEEEEECCEEEEeccCCCCCcHHHHHhhCCCC
Q 000657 16 GWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLT 51 (1370)
Q Consensus 16 ~~~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~ 51 (1370)
+....|.++|||+++++. ..++|.++|...++.
T Consensus 14 ~~~~~m~I~VNG~~~~~~---~~~tl~~LL~~l~~~ 46 (84)
T PRK06083 14 AAMVLITISINDQSIQVD---ISSSLAQIIAQLSLP 46 (84)
T ss_pred CCCceEEEEECCeEEEcC---CCCcHHHHHHHcCCC
Confidence 445689999999998765 678999999876654
No 122
>COG2104 ThiS Sulfur transfer protein involved in thiamine biosynthesis [Coenzyme metabolism]
Probab=57.90 E-value=14 Score=33.42 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=26.2
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCcc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGT 53 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~ 53 (1370)
|.|++.+||+++++. ..+||.|+|++.++..-
T Consensus 1 ~~m~i~~ng~~~e~~---~~~tv~dLL~~l~~~~~ 32 (68)
T COG2104 1 MPMTIQLNGKEVEIA---EGTTVADLLAQLGLNPE 32 (68)
T ss_pred CcEEEEECCEEEEcC---CCCcHHHHHHHhCCCCc
Confidence 468899999999864 45999999998887753
No 123
>TIGR02911 sulfite_red_B sulfite reductase, subunit B. Members of this protein family include the B subunit, one of three subunits, of the anaerobic sulfite reductase of Salmonella, and close homologs from various Clostridum species, where the three-gene neighborhood is preserved. Two such gene clusters are found in Clostridium perfringens, but it may be that these sets of genes correspond to the distinct assimilatory and dissimilatory forms as seen in Clostridium pasteurianum.
Probab=57.54 E-value=6 Score=45.45 Aligned_cols=28 Identities=32% Similarity=0.749 Sum_probs=21.6
Q ss_pred HHHHHhhCCCC--------ccccCCCCCCCCceEEE
Q 000657 41 LLEYLRDIGLT--------GTKLGCGEGGCGACTVM 68 (1370)
Q Consensus 41 L~~~LR~~~l~--------g~k~gC~~G~CGaCtV~ 68 (1370)
+.+.|++.|+. .++..|+.|.||+|.|-
T Consensus 205 ~~~~L~~~Gv~~~~i~~~~~~~m~cg~g~c~~c~~~ 240 (261)
T TIGR02911 205 TVQELLKKGIKEENIWVSYERKMCCGVGKCGHCKID 240 (261)
T ss_pred HHHHHHHcCCCHHHEEEEeccceeccCcCCCCcccC
Confidence 45566665653 57889999999999875
No 124
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=55.70 E-value=40 Score=31.41 Aligned_cols=51 Identities=20% Similarity=0.256 Sum_probs=38.9
Q ss_pred EEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000657 1057 ALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1107 (1370)
Q Consensus 1057 a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1107 (1370)
....++.||.+.|.......--=.+..+....|+.||+|..+|+|..+.|.
T Consensus 18 ~i~~~~~~~~l~i~v~app~~GkAN~ali~~La~~l~v~ks~i~i~~G~~S 68 (77)
T PF02594_consen 18 AIVGVEGDGALKIRVTAPPVDGKANKALIRFLAKALGVPKSDIEIVSGHTS 68 (77)
T ss_dssp EEEEE-TTT-EEEEBSTTCCCCCHHHHHHHHHHHHCT--TTCEEECC-CCC
T ss_pred ccccccCceEEEEEEecCCCcChhHHHHHHHHHHHhCCCcccEEEEecCCC
Confidence 344666678999998888887678899999999999999999999988765
No 125
>PRK05659 sulfur carrier protein ThiS; Validated
Probab=54.50 E-value=15 Score=32.75 Aligned_cols=29 Identities=28% Similarity=0.395 Sum_probs=23.2
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCCc
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTG 52 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g 52 (1370)
++++|||+++++. ..+||.++|...++..
T Consensus 1 m~i~vNG~~~~~~---~~~tl~~lL~~l~~~~ 29 (66)
T PRK05659 1 MNIQLNGEPRELP---DGESVAALLAREGLAG 29 (66)
T ss_pred CEEEECCeEEEcC---CCCCHHHHHHhcCCCC
Confidence 3689999998764 6789999998777654
No 126
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=51.12 E-value=28 Score=49.18 Aligned_cols=59 Identities=19% Similarity=0.169 Sum_probs=46.6
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCc
Q 000657 782 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKET 841 (1370)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFGgK~~ 841 (1370)
+....+++... .||.++|+++++.. ..+...+|+.||||.++|+|... +-+|.+|++.+
T Consensus 1015 ~~~~~a~v~i~-~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~gSr~t 1084 (1330)
T TIGR02969 1015 MGQAAALVHIY-LDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGTSTETVPNTNASGGSVVA 1084 (1330)
T ss_pred CCCccEEEEEc-CCceEEEEECCcCcCCChHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCCchHHHH
Confidence 44567777776 48999999998655 45678899999999999999864 34788888765
No 127
>PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed
Probab=49.37 E-value=6.7 Score=44.65 Aligned_cols=31 Identities=29% Similarity=0.747 Sum_probs=22.4
Q ss_pred HHHHHhhCCCC-----ccccCCCCCCCCceEEEEcc
Q 000657 41 LLEYLRDIGLT-----GTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 41 L~~~LR~~~l~-----g~k~gC~~G~CGaCtV~~~~ 71 (1370)
+...|++.|+. ....+||.|.||+|.|.+++
T Consensus 196 v~~~l~~~Gv~~~~~~e~~m~cg~G~C~~C~~~~~~ 231 (250)
T PRK00054 196 VVEILKEKKVPAYVSLERRMKCGIGACGACVCDTET 231 (250)
T ss_pred HHHHHHHcCCcEEEEEcccccCcCcccCcCCcccCC
Confidence 55666665532 23468999999999999875
No 128
>cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (formi
Probab=48.34 E-value=11 Score=42.78 Aligned_cols=18 Identities=44% Similarity=1.016 Sum_probs=15.6
Q ss_pred cccCCCCCCCCceEEEEc
Q 000657 53 TKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 53 ~k~gC~~G~CGaCtV~~~ 70 (1370)
.+.+|+.|.||+|+|-.+
T Consensus 212 ~~m~Cg~G~C~~C~~~~~ 229 (243)
T cd06192 212 SPMCCGIGICGACTIETK 229 (243)
T ss_pred ccccCccccccceEEEeC
Confidence 467899999999999765
No 129
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases. Clostridium pasteurianum inducible dissimilatory type sulfite reductase is linked to ferredoxin and reduces NH2OH and SeO3 at a lesser rate than it's normal substate SO3(2-). Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+.
Probab=47.49 E-value=11 Score=43.19 Aligned_cols=28 Identities=29% Similarity=0.788 Sum_probs=22.3
Q ss_pred HHHHHhhCCCC--------ccccCCCCCCCCceEEE
Q 000657 41 LLEYLRDIGLT--------GTKLGCGEGGCGACTVM 68 (1370)
Q Consensus 41 L~~~LR~~~l~--------g~k~gC~~G~CGaCtV~ 68 (1370)
+.++|++.|+. .++..|++|-||+|.|.
T Consensus 205 ~~~~L~~~Gv~~~~i~~~~~~~~~~~~g~c~~c~~~ 240 (253)
T cd06221 205 VAKELLKLGVPEEQIWVSLERRMKCGVGKCGHCQIG 240 (253)
T ss_pred HHHHHHHcCCCHHHEEEehhhccccCCccccCcccC
Confidence 45677665654 67889999999999997
No 130
>PF10418 DHODB_Fe-S_bind: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; InterPro: IPR019480 Lactococcus lactis is one of the few organisms with two dihydroorotate dehydrogenases (DHODs) A and B []. The B enzyme is typical of DHODs in Gram-positive bacteria that use NAD+ as the second substrate. DHODB is a heterotetramer composed of a central homodimer of PyrDB subunits resembling the DHODA structure and two PyrK subunits along with three different cofactors: FMN, FAD, and a [2Fe-2S] cluster. The [2Fe-2S] iron-sulphur cluster binds to this C-terminal domain of the PyrK subunit, which is at the interface between the flavin and NAD binding domains and contains three beta-strands. The four cysteine residues at the N-terminal part of this domain are the ones that bind, in pairs, to the iron-sulphur cluster. The conformation of the whole molecule means that the iron-sulphur cluster is localized in a well-ordered part of this domain close to the FAD binding site []. The FAD and NAD binding domains are IPR008333 from INTERPRO and IPR001433 from INTERPRO respectively. ; PDB: 1EP2_B 1EP3_B 1EP1_B.
Probab=46.77 E-value=11 Score=30.43 Aligned_cols=19 Identities=42% Similarity=1.111 Sum_probs=13.7
Q ss_pred cccCCCCCCCCceEEEEcc
Q 000657 53 TKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 53 ~k~gC~~G~CGaCtV~~~~ 71 (1370)
.+.+|+-|.|++|.|-..+
T Consensus 2 ~~M~CG~G~C~~C~v~~~~ 20 (40)
T PF10418_consen 2 RRMACGVGACGGCVVPVKD 20 (40)
T ss_dssp ---SSSSSSS-TTEEECSS
T ss_pred CcccCCCcEeCCcEeeeec
Confidence 4678999999999998874
No 131
>COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion]
Probab=46.74 E-value=21 Score=40.78 Aligned_cols=51 Identities=31% Similarity=0.477 Sum_probs=38.8
Q ss_pred ceEEEEEECCEE-EEeccCCCCCcHHHHHhhCCCCccccCCCC-CCCCceEEEEc
Q 000657 18 TKEAILYVNGLR-KVLPDGLAHLTLLEYLRDIGLTGTKLGCGE-GGCGACTVMVS 70 (1370)
Q Consensus 18 ~~~i~~~~Ng~~-~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~-G~CGaCtV~~~ 70 (1370)
...+++.|||.+ ... .++++.+||.-|-..|+. +-..||. |.||-|.|-|-
T Consensus 34 ~gd~ti~IN~d~e~~~-t~~aG~kLL~~L~~~gif-i~SaCGGggsC~QCkv~v~ 86 (410)
T COG2871 34 VGDITIKINGDPEKTK-TVPAGGKLLGALASSGIF-ISSACGGGGSCGQCKVRVK 86 (410)
T ss_pred cCceEEEeCCChhhce-ecCCchhHHHHHHhCCcc-cccCCCCCccccccEEEEe
Confidence 356889999943 334 388999999999887765 4456774 68999999885
No 132
>PRK08364 sulfur carrier protein ThiS; Provisional
Probab=46.31 E-value=43 Score=30.41 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=30.2
Q ss_pred EEEEEECCE--EEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEcc
Q 000657 20 EAILYVNGL--RKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 20 ~i~~~~Ng~--~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
+|+++|||+ +.+++ .++++|+.++|++.++.. -.+.|.+|+
T Consensus 4 mm~v~vng~~~~~~~~-~~~~~tv~~ll~~l~~~~----------~~v~v~vNg 46 (70)
T PRK08364 4 MIRVKVIGRGIEKEIE-WRKGMKVADILRAVGFNT----------ESAIAKVNG 46 (70)
T ss_pred EEEEEEeccccceEEE-cCCCCcHHHHHHHcCCCC----------ccEEEEECC
Confidence 488999999 44443 567899999998877753 226788875
No 133
>TIGR01683 thiS thiamine biosynthesis protein ThiS. This model represents ThiS, a small thiamine-biosynthesis protein related to MoaD, a molybdenum cofactor biosynthesis protein. Both proteins are involved in sulfur transfer. ThiS has a conserved Gly-Gly C-terminus that is modified, in reactions requiring ThiI, ThiF, IscS, and a sulfur atom from Cys, into the thiocarboxylate that provides the sulfur for thiazole biosynthesis.
Probab=44.56 E-value=37 Score=30.10 Aligned_cols=36 Identities=31% Similarity=0.353 Sum_probs=27.1
Q ss_pred EEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEcc
Q 000657 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
++|||+.+++. ..+||.++|+..++.. ..+.|.+|+
T Consensus 1 i~iNg~~~~~~---~~~tv~~ll~~l~~~~----------~~v~v~vN~ 36 (64)
T TIGR01683 1 ITVNGEPVEVE---DGLTLAALLESLGLDP----------RRVAVAVNG 36 (64)
T ss_pred CEECCeEEEcC---CCCcHHHHHHHcCCCC----------CeEEEEECC
Confidence 47999998864 5789999998877652 335777775
No 134
>PRK06944 sulfur carrier protein ThiS; Provisional
Probab=42.61 E-value=27 Score=30.88 Aligned_cols=28 Identities=21% Similarity=0.195 Sum_probs=22.3
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCC
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLT 51 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~ 51 (1370)
+.++|||+.+++. +.+||.++|...++.
T Consensus 1 m~i~vNg~~~~~~---~~~tl~~ll~~l~~~ 28 (65)
T PRK06944 1 MDIQLNQQTLSLP---DGATVADALAAYGAR 28 (65)
T ss_pred CEEEECCEEEECC---CCCcHHHHHHhhCCC
Confidence 4689999998764 678999999876663
No 135
>PF08869 XisI: XisI protein; InterPro: IPR014968 The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required []. ; PDB: 3D7Q_A 2NWV_A 2NVM_A 2NLV_B.
Probab=40.40 E-value=44 Score=33.34 Aligned_cols=40 Identities=25% Similarity=0.539 Sum_probs=29.5
Q ss_pred eeEEEEEe-cCCcEEEEEcCccCCcchHHHHHHHHHHHh---CCCcccEEEecC
Q 000657 1055 AGALVHVY-TDGTVLVTHGGVEMGQGLHTKVAQVAASAF---NIPLSSVFVSET 1104 (1370)
Q Consensus 1055 ~~a~V~l~-~DGsV~V~~g~~e~GqG~~T~~~qiaAe~L---gip~~~V~v~~~ 1104 (1370)
.++.+.++ .||+|-|..-++|.| +|++| |||.++|.+.--
T Consensus 55 ~g~~iH~dI~dgKIWIq~d~TE~g----------Ia~eLve~GVpk~dIVLgF~ 98 (111)
T PF08869_consen 55 HGCLIHLDIKDGKIWIQRDGTEDG----------IAEELVEAGVPKEDIVLGFH 98 (111)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSH----------HHHHHHHTT--GGGEEETTS
T ss_pred EEEEEEEEEECCeEEEEcCchhhH----------HHHHHHHcCCCHHHEEEccC
Confidence 45666666 799999999999988 44444 999999988643
No 136
>PRK07696 sulfur carrier protein ThiS; Provisional
Probab=39.94 E-value=35 Score=30.73 Aligned_cols=28 Identities=29% Similarity=0.363 Sum_probs=22.0
Q ss_pred EEEEECCEEEEeccCCCC-CcHHHHHhhCCCC
Q 000657 21 AILYVNGLRKVLPDGLAH-LTLLEYLRDIGLT 51 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~-~~L~~~LR~~~l~ 51 (1370)
+.++|||+++++. .. .||.++|...++.
T Consensus 1 m~I~vNG~~~~~~---~~~~tv~~lL~~l~~~ 29 (67)
T PRK07696 1 MNLKINGNQIEVP---ESVKTVAELLTHLELD 29 (67)
T ss_pred CEEEECCEEEEcC---CCcccHHHHHHHcCCC
Confidence 4689999998764 34 6899999877775
No 137
>KOG3049 consensus Succinate dehydrogenase, Fe-S protein subunit [Energy production and conversion]
Probab=38.70 E-value=13 Score=40.33 Aligned_cols=46 Identities=22% Similarity=0.457 Sum_probs=33.4
Q ss_pred CCcHHHHHhh----C-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhc
Q 000657 38 HLTLLEYLRD----I-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYS 93 (1370)
Q Consensus 38 ~~~L~~~LR~----~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 93 (1370)
+.++||.|-. . ---..+.+|.||.||+|...++| .-..+|+..+-+
T Consensus 76 GpMvLDALiKIKnE~DptLTFRRSCREGICGSCAMNI~G----------~NtLACi~kId~ 126 (288)
T KOG3049|consen 76 GPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNING----------TNTLACICKIDQ 126 (288)
T ss_pred chHHHHHHHHhhcccCCceehhhhhhccccccceeccCC----------CceeEEEEeecc
Confidence 5678887753 2 22235789999999999999997 335788776554
No 138
>PF10437 Lip_prot_lig_C: Bacterial lipoate protein ligase C-terminus; InterPro: IPR019491 This is the C-terminal domain of a bacterial lipoate protein ligase. There is no conservation between this C terminus and that of vertebrate lipoate protein ligase C-termini, but both are associated with IPR004143 from INTERPRO, further upstream. This C-terminal domain is more stable than IPR004143 from INTERPRO and the hypothesis is that the C-terminal domain has a role in recognising the lipoyl domain and/or transferring the lipoyl group onto it from the lipoyl-AMP intermediate. C-terminal fragments of length 172 to 193 amino acid residues are observed in the eubacterial enzymes whereas in their archaeal counterparts the C-terminal segment is significantly smaller, ranging in size from 87 to 107 amino acid residues. ; PDB: 1X2G_A 3A7R_A 3A7A_A 1X2H_C 1VQZ_A 3R07_C.
Probab=37.27 E-value=1.7e+02 Score=27.54 Aligned_cols=50 Identities=12% Similarity=0.285 Sum_probs=37.6
Q ss_pred EEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhh
Q 000657 474 GMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKIL 529 (1370)
Q Consensus 474 A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 529 (1370)
-+.+.++. | +|++++|.==-+.+.. ..+.|+.|.|.+.+.+.+.++++.+
T Consensus 19 ~v~~~V~~-G---~I~~i~i~gDf~~~~~--i~~le~~L~G~~~~~~~i~~~l~~~ 68 (86)
T PF10437_consen 19 EVHLNVKN-G---IIKDIKIYGDFFGPED--IEELEEALIGCPYDREAIKEALNSV 68 (86)
T ss_dssp EEEEEEET-T---EEEEEEEEECBS-CCC--HHHHHHHHTTCBSSHHHHHHHHHHC
T ss_pred EEEEEEEC-C---EEEEEEEECCCCCchH--HHHHHHHHHhcCCCHHHHHHHHHHh
Confidence 34444554 4 9999999733334433 7899999999999999999999887
No 139
>PRK08221 anaerobic sulfite reductase subunit B; Provisional
Probab=36.94 E-value=13 Score=42.86 Aligned_cols=28 Identities=29% Similarity=0.668 Sum_probs=21.3
Q ss_pred HHHHHhhCCCC--------ccccCCCCCCCCceEEE
Q 000657 41 LLEYLRDIGLT--------GTKLGCGEGGCGACTVM 68 (1370)
Q Consensus 41 L~~~LR~~~l~--------g~k~gC~~G~CGaCtV~ 68 (1370)
..+.|++.|+. .++..|++|.||+|+|.
T Consensus 207 ~~~~L~~~Gv~~~~i~~~~~~~m~cg~g~c~~c~~~ 242 (263)
T PRK08221 207 TVLEFLKRGIKEENIWVSYERKMCCGVGKCGHCKID 242 (263)
T ss_pred HHHHHHHcCCCHHHEEEEecceeEccCcccCCcccC
Confidence 45566655654 46789999999999975
No 140
>cd00565 ThiS ThiaminS ubiquitin-like sulfur carrier protein. ThiS (ThiaminS) is a sulfur carrier protein involved in thiamin biosynthesis in bacteria. The ThiS fold, like those of two closely related proteins MoaD and Urm1, is similar to that of ubiquitin although there is little or no sequence similarity.
Probab=35.56 E-value=75 Score=28.23 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=26.8
Q ss_pred EEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEcc
Q 000657 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
++|||+++++. ..+|+.++|...++.. ..|.|.+|+
T Consensus 2 i~iNg~~~~~~---~~~tv~~ll~~l~~~~----------~~i~V~vNg 37 (65)
T cd00565 2 ITVNGEPREVE---EGATLAELLEELGLDP----------RGVAVALNG 37 (65)
T ss_pred EEECCeEEEcC---CCCCHHHHHHHcCCCC----------CcEEEEECC
Confidence 78999998865 5789999998776542 235677765
No 141
>KOG4730 consensus D-arabinono-1, 4-lactone oxidase [Defense mechanisms]
Probab=34.72 E-value=49 Score=40.38 Aligned_cols=76 Identities=16% Similarity=0.168 Sum_probs=50.0
Q ss_pred eEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHH
Q 000657 272 KWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLK 347 (1370)
Q Consensus 272 ~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~ 347 (1370)
..-.|+|++|+.++.+.. + ..|.|. .++-+- .-...-..+|+++.+.-.-++..+...+++=|++++.||.+
T Consensus 52 nv~yP~teaeL~~lVa~A~~a~~kirvVg--~gHSp~--~l~ctdg~lisl~~lnkVv~~dpe~~tvTV~aGirlrQLie 127 (518)
T KOG4730|consen 52 NVNYPKTEAELVELVAAATEAGKKIRVVG--SGHSPS--KLVCTDGLLISLDKLNKVVEFDPELKTVTVQAGIRLRQLIE 127 (518)
T ss_pred ccCCCCCHHHHHHHHHHHHHcCceEEEec--ccCCCC--cceeccccEEEhhhhccceeeCchhceEEeccCcCHHHHHH
Confidence 455699999999998765 2 234443 343331 11112237888877665555555567889999999999999
Q ss_pred HHHH
Q 000657 348 MFRK 351 (1370)
Q Consensus 348 ~l~~ 351 (1370)
.+++
T Consensus 128 ~~~~ 131 (518)
T KOG4730|consen 128 ELAK 131 (518)
T ss_pred HHHh
Confidence 8764
No 142
>cd06219 DHOD_e_trans_like1 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group, as in flavoenzymes, or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD,
Probab=32.22 E-value=24 Score=40.17 Aligned_cols=31 Identities=35% Similarity=0.592 Sum_probs=23.2
Q ss_pred HHHHHhhCCCCc-----cccCCCCCCCCceEEEEcc
Q 000657 41 LLEYLRDIGLTG-----TKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 41 L~~~LR~~~l~g-----~k~gC~~G~CGaCtV~~~~ 71 (1370)
+.+.|++.|+.. .+.+||.|.||+|+|-.++
T Consensus 195 ~~~~l~~~Gv~~~~s~e~~m~Cg~G~C~~C~~~~~~ 230 (248)
T cd06219 195 VSELTRPYGIPTVVSLNPIMVDGTGMCGACRVTVGG 230 (248)
T ss_pred HHHHHHHcCCCEEEEecccccCccceeeeEEEEeCC
Confidence 456776655543 5688999999999998653
No 143
>PRK08345 cytochrome-c3 hydrogenase subunit gamma; Provisional
Probab=31.73 E-value=27 Score=40.74 Aligned_cols=31 Identities=32% Similarity=0.695 Sum_probs=23.4
Q ss_pred HHHHHhhCCCC--------ccccCCCCCCCCceEEEEcc
Q 000657 41 LLEYLRDIGLT--------GTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 41 L~~~LR~~~l~--------g~k~gC~~G~CGaCtV~~~~ 71 (1370)
+.+.|++.|+. ....+||-|.||+|+|-.++
T Consensus 227 v~~~L~~~Gv~~~~i~~~l~~~m~cg~g~c~~c~~~~~~ 265 (289)
T PRK08345 227 VFKELINRGYRPERIYVTLERRMRCGIGKCGHCIVGTST 265 (289)
T ss_pred HHHHHHHcCCCHHHEEEEehhcccccCcccCCCccCCCC
Confidence 55566655654 35789999999999998753
No 144
>PRK06488 sulfur carrier protein ThiS; Validated
Probab=29.52 E-value=57 Score=29.00 Aligned_cols=27 Identities=26% Similarity=0.261 Sum_probs=21.1
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCC
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLT 51 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~ 51 (1370)
|+++|||++++++ .+||.++|+..++.
T Consensus 1 m~i~~Ng~~~~~~----~~tl~~Ll~~l~~~ 27 (65)
T PRK06488 1 MKLFVNGETLQTE----ATTLALLLAELDYE 27 (65)
T ss_pred CEEEECCeEEEcC----cCcHHHHHHHcCCC
Confidence 4689999999873 36899999876654
No 145
>PRK05802 hypothetical protein; Provisional
Probab=28.92 E-value=33 Score=40.72 Aligned_cols=20 Identities=55% Similarity=1.054 Sum_probs=17.2
Q ss_pred ccccCCCCCCCCceEEEEcc
Q 000657 52 GTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 52 g~k~gC~~G~CGaCtV~~~~ 71 (1370)
..+.+||.|.||+|+|-.++
T Consensus 287 e~~M~CG~G~Cg~C~v~~~g 306 (320)
T PRK05802 287 NAKMCCGEGICGACTVRYGG 306 (320)
T ss_pred CCeeeCcCccCCeeEEEECC
Confidence 35889999999999999753
No 146
>PRK00647 hypothetical protein; Validated
Probab=27.29 E-value=1.3e+02 Score=29.22 Aligned_cols=45 Identities=18% Similarity=0.152 Sum_probs=38.6
Q ss_pred cCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000657 1063 TDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1107 (1370)
Q Consensus 1063 ~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1107 (1370)
.+|.+.|..-..+.---.+..+.+..|+.||+|..+|.|..+.|.
T Consensus 25 ~~~~Lkvrv~ApPvdGKAN~ali~~LAk~l~vpks~I~Iv~G~tS 69 (96)
T PRK00647 25 EGGILKVRVTEVPEKGKANDAVIALLAKFLSLPKRDVTLIAGETS 69 (96)
T ss_pred cCCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 357778887777777678899999999999999999999988775
No 147
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=27.08 E-value=54 Score=32.72 Aligned_cols=31 Identities=10% Similarity=0.270 Sum_probs=25.3
Q ss_pred cchHHHHHHHHHHHhCCCcccEEEecCCCCC
Q 000657 1078 QGLHTKVAQVAASAFNIPLSSVFVSETSTDK 1108 (1370)
Q Consensus 1078 qG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~ 1108 (1370)
+-+...++..+++.||||+++|.|.-.|...
T Consensus 75 ~~l~~~i~~~l~~~lgi~~~rv~I~f~~~~~ 105 (116)
T PTZ00397 75 SSIAAAITKILASHLKVKSERVYIEFKDCSA 105 (116)
T ss_pred HHHHHHHHHHHHHHhCcCcccEEEEEEECCh
Confidence 3466778899999999999999998776543
No 148
>cd06220 DHOD_e_trans_like2 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.
Probab=25.65 E-value=32 Score=38.67 Aligned_cols=31 Identities=32% Similarity=0.710 Sum_probs=21.8
Q ss_pred cHHHHHhhCCC-----CccccCCCCCCCCceEEEEc
Q 000657 40 TLLEYLRDIGL-----TGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 40 ~L~~~LR~~~l-----~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.+.+.|++.|+ ......|+.|.||+|.|-..
T Consensus 181 ~~~~~L~~~g~~~~i~~e~f~~cg~g~C~~C~v~~~ 216 (233)
T cd06220 181 KVLEILDERGVRAQFSLERYMKCGIGICGSCCIDPT 216 (233)
T ss_pred HHHHHHHhcCCcEEEEecccccCcCCCcCccEeccC
Confidence 35556665444 22346899999999999875
No 149
>COG3894 Uncharacterized metal-binding protein [General function prediction only]
Probab=22.49 E-value=86 Score=38.86 Aligned_cols=47 Identities=30% Similarity=0.526 Sum_probs=37.6
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCC-CCCCCceEEEEccc
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSRY 72 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~~ 72 (1370)
++|.=-|++.+ +..+|.|+.-|+.| -.++.-|| .|.||-|.|.|.+.
T Consensus 4 v~f~psgkr~~----~~g~~il~aar~~g-v~i~s~cggk~~cgkc~v~v~~g 51 (614)
T COG3894 4 VTFMPSGKRGE----DEGTTILDAARRLG-VYIRSVCGGKGTCGKCQVVVQEG 51 (614)
T ss_pred eEeecCCCcCC----CCCchHHHHHHhhC-ceEeeecCCCccccceEEEEEeC
Confidence 56777888765 35899999999887 45777787 69999999999763
No 150
>PRK05090 hypothetical protein; Validated
Probab=22.43 E-value=1.9e+02 Score=28.17 Aligned_cols=45 Identities=11% Similarity=0.147 Sum_probs=37.8
Q ss_pred cCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000657 1063 TDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1107 (1370)
Q Consensus 1063 ~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1107 (1370)
.+|.+.|.......--=.+..+....|+.||+|..+|.|..+.|.
T Consensus 30 ~~~~lkv~v~ApPveGkAN~ali~~LAk~l~v~ks~I~i~~G~ts 74 (95)
T PRK05090 30 HGDELKVAITAPPVDGQANAHLLKFLAKQFRVAKSQVVIEKGELG 74 (95)
T ss_pred cCCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 467788887777776567889999999999999999999988765
No 151
>PRK01530 hypothetical protein; Reviewed
Probab=21.29 E-value=1.9e+02 Score=28.63 Aligned_cols=44 Identities=7% Similarity=0.052 Sum_probs=36.4
Q ss_pred CCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCC
Q 000657 1064 DGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1107 (1370)
Q Consensus 1064 DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~ 1107 (1370)
+|.+.|.....+.--=.+..+....|+.||||..+|.|..+.|.
T Consensus 38 ~~~Lki~v~ApPvdGkAN~ali~~LAk~l~v~ks~I~IvsG~tS 81 (105)
T PRK01530 38 IPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTH 81 (105)
T ss_pred CCEEEEEEecCCCCChHHHHHHHHHHHHhCCChhhEEEEecCCC
Confidence 45677777776665557888999999999999999999988775
No 152
>PF06971 Put_DNA-bind_N: Putative DNA-binding protein N-terminus; InterPro: IPR009718 This entry represents the C terminus (approximately 30 residues) of a number of Rex proteins. These are redox-sensing repressors that appear to be widespread among Gram-positive bacteria []. They modulate transcription in response to changes in cellular NADH/NAD(+) redox state. Rex is predicted to include a pyridine nucleotide-binding domain (Rossmann fold), and residues that might play key structural and nucleotide binding roles are highly conserved.; GO: 0045892 negative regulation of transcription, DNA-dependent, 0051775 response to redox state, 0005737 cytoplasm; PDB: 3IL2_B 3IKT_A 3IKV_B 1XCB_F 2DT5_A 2VT3_A 2VT2_A 3KEO_B 3KET_A 3KEQ_A ....
Probab=20.19 E-value=84 Score=26.83 Aligned_cols=17 Identities=24% Similarity=0.395 Sum_probs=14.1
Q ss_pred HHHHHHhCCCHHHHHHH
Q 000657 966 QRVAVEVRKSPEEIREI 982 (1370)
Q Consensus 966 DelA~~lg~DP~e~Rl~ 982 (1370)
.+||+.+|++|.++|+.
T Consensus 32 ~~La~~~gi~~~qVRKD 48 (50)
T PF06971_consen 32 QELAEALGITPAQVRKD 48 (50)
T ss_dssp HHHHHHHTS-HHHHHHH
T ss_pred HHHHHHHCCCHHHhccc
Confidence 58999999999999963
Done!