Query 000658
Match_columns 1368
No_of_seqs 436 out of 2215
Neff 5.7
Searched_HMMs 29240
Date Tue Mar 26 16:26:35 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000658.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_431-435//hhsearch_pdb/000658hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxu_X Tripeptidyl-peptidase 2 1.0 1 1 2538.4 85.2 1218 87-1368 6-1354(1354)
2 1xf1_A C5A peptidase, SCP; hyd 1.0 1 1 450.1 27.9 367 348-736 84-607 (926)
3 3vta_A Cucumisin; subtilisin-l 1.0 1 1 406.5 35.3 246 345-600 87-475 (621)
4 3i6s_A Subtilisin-like proteas 1.0 1 1 404.5 35.1 366 346-734 97-644 (649)
5 3afg_A Subtilisin-like serine 1.0 1 1 398.5 37.2 273 281-602 131-419 (539)
6 4h6x_A Thiazoline oxidase/subt 1.0 1 1 386.5 16.8 237 347-607 104-344 (357)
7 1r6v_A Subtilisin-like serine 1.0 1 1 379.9 27.5 263 284-601 153-439 (671)
8 3t41_A Epidermin leader peptid 1.0 1 1 378.9 20.6 274 285-604 146-468 (471)
9 2x8j_A Intracellular subtilisi 1.0 1 1 378.6 18.4 267 285-607 41-317 (327)
10 3zxy_A Subtilisin-like protein 1.0 1 1 376.8 21.4 271 285-605 8-279 (282)
No 1
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=2538.39 Aligned_cols=1218 Identities=32% Similarity=0.538 Sum_probs=1126.2
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCCCCEEEE
Q ss_conf 454210135898122038789884999877532999985355899999733689981-2999982779885457525540
Q 000658 87 LNESTFLASLMPKKEIGADRFVEANPQFDGRGVVIAIFDSGVDPAAAGLQVTSDGKP-KILDVIDCTGSGDIDTSTVIKA 165 (1368)
Q Consensus 87 ~~~~~~~~~l~Pk~etga~~f~~~~p~~dGrgv~iaIlDTGVDp~~pglq~t~dG~~-Kiid~~D~Tg~GdVd~~~vv~~ 165 (1368)
..++||+++||||+||||.+|+++||+||||||+||||||||||+|||||+|+||+| ||||++||||+|||||++||++
T Consensus 6 ~~~~fp~~~llpK~et~~~~fl~~~P~ydGrgv~iai~DtGVDP~a~glq~t~dG~~~Kiid~~D~tG~GDVdts~v~~~ 85 (1354)
T 3lxu_X 6 IVESFPTGALVPKAETGVLNFLQKYPEYDGRDVTIAIFDSGVDPRATGLETLCDGKTVKVIERYDCSGCGDVDMKKKVTP 85 (1354)
T ss_dssp ------------CCTTTTCSSGGGSTTCSSTTCEEEEEESCCCTTSTTSSCCTTSSSCSCCEEEETTSTTEEETTEECCC
T ss_pred CCCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCEEEEC
T ss_conf 56788500007776761999998687878996489998178898988666468998642699885788876436137861
Q ss_pred CCCCCEEECCCCEEEECCCC----CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89981760014548747865----59983149966664013527899998763211-01134599999999889997430
Q 000658 166 DSDGCIRGASGATLVVNSSW----KNPSGEWHVGYKLVYELFTESLTSRLKSERKK-KWEEKNQEAIAKAVKHLDEFNQK 240 (1368)
Q Consensus 166 ~~dg~i~~~sGr~l~i~~~w----~~psg~~~vG~k~~~~lfp~~l~~rl~kerk~-~w~~~~~~a~aea~~~l~~f~~~ 240 (1368)
+.||+|+|++||+|+||++| +||+|+||||+|..|+|||+.|++|+++|||+ .|++.|+.+++++.+++.+|+.+
T Consensus 86 ~~~g~i~glsgr~l~~~~~w~~~~~~p~g~~~vG~k~~~~l~p~~l~~Rl~~erk~~~Wd~~~~~~~a~a~~~~~~~~~~ 165 (1354)
T 3lxu_X 86 DENGNIKGLSGNSLKLSPELMALNTDPEKAVRVGLKSFSDLLPSKVRNNIVAQAKLKHWDKPHKTATANASRKIVEFESQ 165 (1354)
T ss_dssp TTCC-----------------------CCSCCCCCSCCSSCTTSCCEEEEEECSSSSCTTCGGGCCCSSSTTTTCCCCCC
T ss_pred CCCCCEECCCCCEEECCHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 78983741658758669788511559888679987633334868789998876554313177799999999987776412
Q ss_pred CCCCC---CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 47653---201222125554547874201333499884001176448981999994999999999898588887778733
Q 000658 241 HKKVE---DGKLKRVREDLQNRVDILRKQAESYDDKGPVVDAVVWHDGEVWRVALDTQSLEDEPDHGKLADFAPLTNYKT 317 (1368)
Q Consensus 241 ~~~p~---~~~~k~~~e~l~~~v~~L~~~~~~y~d~gp~id~~vw~~GgV~VAVIDTGI~~~d~~~~dL~~~~~l~~y~~ 317 (1368)
++.+. ....++.+|+++.++++|+.+++.|.+.||.+||++|++|+||||||||| .++|+.+...+.+|+.
T Consensus 166 ~p~~~~~~~~~~k~~keelq~~~e~L~~~~k~y~d~gpv~D~vVw~dG~V~VAVIDTG------~d~DL~d~~~l~~Y~~ 239 (1354)
T 3lxu_X 166 NPGEASKLPWDKKILKENLDFELEMLNSYEKVYGDIKTSYDCILFPTADGWLTIVDTT------EQGDLDQALRIGEYSR 239 (1354)
T ss_dssp CCSCSSSCCTTTHHHHHHHHHHHHHHHHHHTTGGGCCCEEEEEEECCSSSCEEEECSS------SSCCSSCSEEEECTTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECC------CCCCCCCCCCCCCCCC
T ss_conf 8974334545679988777778999899987466878642068977899899999597------9888655644556544
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHH
Q ss_conf 34666433576643223213688732347899991989999986469999986431279739999960499997677225
Q 000658 318 ERKHGVFSKLDACTFVANVYDEGNVLSIVTDSSPHGTHVAGIATAFNPEEPLLNGIAPGAQLISCKIGDTRLGSMETGTG 397 (1368)
Q Consensus 318 ~~~~g~f~~~d~~~~~~n~~d~gn~~~~~~D~~gHGThVAGIIAg~~~n~~g~~GVAP~AkIi~vKV~d~~~gs~et~s~ 397 (1368)
..+|+.| .+.+++..+++++++...+..|++||||||||||||.. |+.++.||||+|+|+++|+++...+.++++.+
T Consensus 240 ~~dyg~F--~D~v~~~~n~~Ddgd~~~~v~D~~GHGThVAGIIAa~~-N~~g~~GVAP~AkI~~vKVld~~~g~~~t~s~ 316 (1354)
T 3lxu_X 240 THETRNV--DDFLSISVNVHDEGNVLEVVGMSSPHGTHVSSIASGNH-SSRDVDGVAPNAKIVSMTIGDGRLGSMETGTA 316 (1354)
T ss_dssp TCCCCEE--SSSCEEEEEEEGGGTEEEEEECCCHHHHHHHHHHCCCC-SSSSSCCSCTTCEEEEEECBCTTTSSCBCHHH
T ss_pred CCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC-CCCCCEEECCCCEEEEEEECCCCCCCCCCHHH
T ss_conf 2335543--34457877557998742458899996799999996677-87872556579879999942677776567179
Q ss_pred HHHHHHHHHH-----CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC-CCCCEEEE
Q ss_conf 9999999995-----99929996868999999837999999999973994999943899999998789999-99984999
Q 000658 398 LTRAFIAAVE-----HKCDLINMSYGEPTLLPDYGRFIDLVNEAVNKHRLVFVSSAGNSGPALNTVGAPGG-TSSSIIAV 471 (1368)
Q Consensus 398 ii~Ai~~Ai~-----~gadVINmS~G~~~~~~~~~~~~~~a~e~a~~~GVIvV~AAGN~G~~~~tvg~Pa~-~s~~VIsV 471 (1368)
++.+|.+|++ ++++|||||||....+.....+.+.+.+++.++|+++|+||||+|++.+++++|+. +++++|+|
T Consensus 317 l~~AI~~Aid~a~~~~gadVINmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItV 396 (1354)
T 3lxu_X 317 LVRAMTKVMELCRDGRRIDVINMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGV 396 (1354)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 99999999987763379659984876688887647999999999983795899808887788886578410258853899
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHH
Q ss_conf 43327210147631126999998310279998999997428994498122103668881120489971268887999999
Q 000658 472 GAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVCISAPGGAVAPVSTWTLQRRMLMNGTSMASPSACGGIALL 551 (1368)
Q Consensus 472 GA~~s~~~~~~~~~v~~~~~~g~~s~fSS~Gp~~DG~ikpDI~APG~~I~s~~~~~~~~~~~~sGTSmAAP~VAGaaALL 551 (1368)
||++...+....|+.... ..+.++.|||+||+.+++.+|||+|||++|.+.+.+..++|..++|||||||+|||++|||
T Consensus 397 GAtd~~~~~~a~ys~~~~-~~g~~asFSS~GPt~dg~~KpDIaAPG~~I~St~~~~~~~y~~~SGTSmAAP~VAGvAALL 475 (1354)
T 3lxu_X 397 GAYVSPQMMEAEYAMREK-LPGNVYTWTSRDPCIDGGQGVTVCAPGGAIASVPQFTMSKSQLMNGTSMAAPHVAGAVALL 475 (1354)
T ss_dssp EEECCTTCCCC-----------CCCCCCCCSCCSSSSCCEEEEEEC---------------CCCCGGGCHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHH
T ss_conf 766178874322234567-7774012258898756787615993573278730589996524787778899999999999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC--EEEEEEEECCCCCCCCCEE
Q ss_conf 89866179999999999999823955898888988543340499899999995399982--4589997048998873002
Q 000658 552 ISAMKANAIPVSPYTVRKAVENTSVPIGALAEDKLSTGHGLLQVDKAYEYVQQYGNVPC--VSYQIKINQSGKLTPTYRG 629 (1368)
Q Consensus 552 lsa~k~~~p~ltp~~Ik~lL~~TA~~~~~~~~~~~~~G~GlIdv~kAv~~l~~~~~~p~--~~~~vsv~~~~~~~~~~rg 629 (1368)
+|++++.+|.+++.+|+++|++||++.+.. +.+.+|||+||+.+|++.+..+...+. +.|.+++.. ...+|
T Consensus 476 LSalkq~~P~LTp~qVk~lL~~TA~~~~~~--~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~-----~~~rg 548 (1354)
T 3lxu_X 476 ISGLKQQNIEYSPYSIKRAISVTATKLGYV--DPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGN-----NADKG 548 (1354)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHTTSBCCTTS--CTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETT-----TTBSS
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHCCCCCCC--CCCCCCCCEECHHHHHHHHHHCCCCCCCCEEEEEEECC-----CCCCC
T ss_conf 976686489989999999999748568899--94454687857999999998658897663489998557-----78873
Q ss_pred EEEECCCCCCCEEEEEEEEEEEC--CCCCCCCCCCCCCEEEEEEEECCCCEEECCCCEEECCCCEEEEEEECCCCCCCCE
Q ss_conf 99813888885079999963210--4787875554471278998317974597275133048846999999189999970
Q 000658 630 IYLRDAGASQQSTEWTVQVEPKF--HEDASNLEELVPFEECIELHSTDKAVLRAPEYLLLTHNGRSFNVVVDPTNLEDGL 707 (1368)
Q Consensus 630 IylR~~~~~~~~~~~tv~v~p~f--~~~~~~~~~~~~~~~~v~l~~~~~~wV~vp~~~~l~~~~~~~~V~vDp~~L~~G~ 707 (1368)
||+|+... .++.+|+++|+|.| ++.+++ ..++.|+.++.|.++. +||+||.++.+++++|+|+|+|||++|++|+
T Consensus 549 IylR~~~~-~~~~~~tv~V~p~f~~~~~~~~-~~~i~f~~~l~L~~t~-~wv~~p~~l~l~~~~r~~~v~vDp~~L~~G~ 625 (1354)
T 3lxu_X 549 IHLRQGVQ-RNSIDYNVYIEPIFYNDKEADP-KDKFNFNVRLNLIASQ-PWVQCGAFLDLSYGTRSIAVRVDPTGLQPGV 625 (1354)
T ss_dssp EEECSSCC-CSCEEEEEEEEEEESSCSCSSS-TTCSCCCCEEEEEESS-TTEEECSCEECTTSCEEEEEEECGGGCCSEE
T ss_pred EEEECCCC-CCCEEEEEEEEEEECCCCCCCH-HHCCCEEEEEEEECCC-CCEECCCCEEECCCCCEEEEEECCCCCCCCC
T ss_conf 48713234-7861799999664157665772-1225657999986379-8140656235427982589998788899863
Q ss_pred EEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCC--------EEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECC
Q ss_conf 6999999955899999728997999903434589992--------45542111797068999725999718999996158
Q 000658 708 HYYEIYGIDCKAPGRGPLFRIPVTIIKPTAVVKRPPL--------VSFSRMSFLPGQIERRFIEVPLGATWVEATMRTSG 779 (1368)
Q Consensus 708 h~~~i~~~D~~~~~~g~~~~IPvTvv~P~~~~~~~~~--------~~~~~~~~~~G~i~R~Fv~VP~Gat~~~v~l~~~~ 779 (1368)
||++|++||+.+++.||+|+|||||++|..+...... ++++.+.|+||+|+|+||.||+||||++++|++++
T Consensus 626 h~~~v~~~D~~~~~~gp~f~ipvTv~~P~~~~~~~~~~~~~~~~~~~~~~~~~~pg~i~R~Fi~vP~gatwa~~~~~~~~ 705 (1354)
T 3lxu_X 626 HSAVIRAYDTDCVQKGSLFEIPVTVVQPHVLESDQNTPVFEPASSKGDNSVEFQPNTIQRDFILVPERATWAELRMRITD 705 (1354)
T ss_dssp EEEEEEEEESSCTTSCCSEEEEEEEEECBCCCCSSSSCEECCCCSSSCCCEEECSSCCEEEEEECCTTCCEEEEEEEECS
T ss_pred EEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCEEEEEEEECC
T ss_conf 16899999747866686388557998546606776755345433212330320689636898828899866999998358
Q ss_pred CCCC---CEEEEEEECCCCCC--CCCEEEEEEEECCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 9875---51999941136578--864044557406997312879742792799973302048989998428999999974
Q 000658 780 FDTT---RRFFVDTVQVCPLQ--RPLKWENVVTFSSPVSKNFAFPVVGGQTMELAIAQFWSSGMGSHETTIVDFEIEFHG 854 (1368)
Q Consensus 780 ~~~~---~~f~~h~~ql~p~~--r~~e~~~~~~~~~~~~~~~~f~v~~g~t~E~~ia~~Ws~~~~~~~~~~~~~~i~fhg 854 (1368)
++.+ +|||||++||+|++ |.+|++||++|+++++++++|+|+||+||||||||||| |+|++.|||+|+|||
T Consensus 706 ~~~~~~~~~f~~h~~ql~p~~~~~~~e~~k~~~~~~~~~~~~~~~v~~g~tlElcia~~Ws----s~~~~~~~~~i~F~g 781 (1354)
T 3lxu_X 706 PNRGEDIGKFFVHTNQLLPKQSCRKLETMKIVSVGSENESIMAFKVKSGRILELCIAKYWS----NYGQSHLKYSLRFRG 781 (1354)
T ss_dssp SCCTTCEEEEEEEEEECCTTCCGGGSEEEEEEEEESSSCEEEEEECCTTSEEEEEEEECCC----SSSCEEEEEEEEEEC
T ss_pred CCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEHHHHHC----CCCCEEEEEEEEEEE
T ss_conf 8887633159999660357645553111467622789833688996399679998665536----678746899999962
Q ss_pred EECCCC-EEEECCCCCCEEEEEECCCCCCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCCCCCCEEEEEEEEEEEECC
Q ss_conf 320787-0465079984399985257532222223523224441478721210799988778995058999889754146
Q 000658 855 IAVNKD-EVLLDGSEAPVRIDAEALLTSERLAPAAVLNKIRVPCRPIETKLTVLPTNRDKLPSGKQILALTLTYKFKLED 933 (1368)
Q Consensus 855 i~~~~~-~~~~~~~~~~~r~~~~s~l~~e~~~P~~~l~~~~~~~rP~~~~i~pl~~~rd~l~~~~q~~~l~ltY~f~~~~ 933 (1368)
|.++++ .++||+++|++||+|+| |++|+|+|+|+|++|+++|||+++||+||+++||+||+|||+|||+|||+|+++|
T Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~s-l~~e~~~P~~~l~~~~~~lrP~~~~i~pl~~~rd~l~~~~q~~~l~ltY~~~~~~ 860 (1354)
T 3lxu_X 782 VEAHNPNAYVMHAGRGIHKLEIEA-LVAEDVQPQLQLKNAEVVLKPTEAKISPLSATRDVIPDGRQVYQNLLAFNLNVAK 860 (1354)
T ss_dssp EEECSTTTTEEETTSCCEEEEEEE-SSCEEEEEEEEEEEEEEEECCSCEEEEECCSSSSEETTTEECEEEEEEEEEEESS
T ss_pred ECCCCCCCEEEECCCCCEEEEEEE-CCCCCCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEEECCC
T ss_conf 126898615761367614899840-3452225506750327870577534346786212478974124578889873167
Q ss_pred CEEEEECCCCCCCCCCCCCCCCEEEEEEECCC-----CCCCCC--CCCCCCCCEEEEEEEECCCHHHHHHCCCCCEEEEE
Q ss_conf 60563114332132356556513799972899-----987999--97778966799999840896788851387088998
Q 000658 934 GAEVKPQIPLLNNRIYDTKFESQFYMISDTNK-----GDVYPD--YSKLPKGDYNLQLYLRHDNVQYLEKMKQLVLFIER 1006 (1368)
Q Consensus 934 ~~~v~p~~p~l~~~lYes~~~sq~~~i~d~nk-----gd~yp~--~~kl~KG~Y~~~~qirh~~~~~Le~lk~~~l~~~~ 1006 (1368)
++||+|+||+||++||||+||||||||||+|| ||+||+ ++||+|||||||||||||++++|||||++||+|+|
T Consensus 861 ~~ev~~~~p~l~~~lYes~~esq~~~ifd~nk~~~~~gd~yp~~~~~kl~KG~Y~~r~qirh~~~~~Le~lk~~~l~~~~ 940 (1354)
T 3lxu_X 861 AADVSIYAPIFNDLLYEAEFESQMWMLFDANKALVATGDAHSHTSFTKLDKGEYTIRLQVRHEKRDLLEKISEANLVASF 940 (1354)
T ss_dssp CEEEEEECTTTTTCSSSCSSSCCCEEEECTTSCEEEEECSSCTTCCEEECSEEEEEEEEEEESCHHHHGGGTTCCEEEEE
T ss_pred CCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCEEEEE
T ss_conf 72476635433421115613413699984887478605767653443146755799999953998999886468289997
Q ss_pred ECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC--CEEEEEEEECCCCCCCCCCCCC
Q ss_conf 52888727886124999864479865431136997224995699999999999999--6489999911124567779999
Q 000658 1007 KLEEKDVIRLSFFSQPDGPIMGNGTYKSSILVPGKKEAFYLSPPGKDKLPKNSPQG--SILLGAISYGKLSFQGQEGGKN 1084 (1368)
Q Consensus 1007 kL~~~~~i~l~~~~~~~~a~~g~~~~~~~~l~~g~~~~~~~~~~~~~k~pk~~~~g--~~l~G~~~~~k~~~~~~~~~~~ 1084 (1368)
||+++ |+||||++|++|++|++|+++.+| ||+++||||+|+++||+||++.|| ++|+|+|+|+|++.+
T Consensus 941 kL~~~--i~l~~~~~~~~a~~~~~~~~~~~l-~g~~~~~~~~~~~~~k~pk~~~~g~~~~l~G~~~~~k~~~~------- 1010 (1354)
T 3lxu_X 941 KLTSP--LTLDFYENYNQCIVGGRKYVSSPL-RLSTRVLYIAPITQERLTKANLPAQCAWLSGNLVFPQDEVG------- 1010 (1354)
T ss_dssp EEEEE--EEECCBSSHHHHHTTCSCCCCEEE-CSSEEEEEECCCCHHHHHTTTCCTTEEEEEEEEEEESCHHH-------
T ss_pred ECCCC--EEEEEECCCHHHHHCCCCCCCCCC-CCCEEEEEEECCCHHHCCCCCCCCCCEEEEEEEEEECCCCC-------
T ss_conf 24886--366543373455316765555315-89725799606861216667899985189988897124468-------
Q ss_pred CCCCCEEEEEEEECCCC-CCCCCC-------------------------C------------------------------
Q ss_conf 99998169999991899-888888-------------------------9------------------------------
Q 000658 1085 PQKNPVSYEIAYIVPPN-KLDEDK-------------------------G------------------------------ 1108 (1368)
Q Consensus 1085 ~~~~~~~~~~~y~~~p~-~~~~~~-------------------------~------------------------------ 1108 (1368)
|+++.|||+|+++|+ +|..++ .
T Consensus 1011 --~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1088 (1354)
T 3lxu_X 1011 --RRVAQHPFTYILNPAEKKSHTNGSSNGSSAAGSTATAAAVTTANGAKPKAPATPQAATSVTNPAAGDGISVQNDPPVD 1088 (1354)
T ss_dssp --HHHCCEEEEEECCCCC--------------------------------------------------------------
T ss_pred --CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf --865505579996687776555545444322233433222212233444444332222333333345554433455444
Q ss_pred ---CCCCC-CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC----
Q ss_conf ---99999-9999679999999999998760367678132346999999999829999689999998551468878----
Q 000658 1109 ---KGSPT-GTKTVSERLEEEVRDAKMKVLGSLKQETDEECSDWKKLAASLKSEYPKYTPLLAKILEGLLSRSNVG---- 1180 (1368)
Q Consensus 1109 ---~~~~~-~~k~~~~~~~e~~rd~~i~~l~kl~~~~~~~~~~~~~~~~~l~~~~p~~lpl~~~~l~~l~~~~~~~---- 1180 (1368)
+.+++ ++|+.+|+|.|++||+||+||+||+.| +++++|++|+++||+|||||+++||+||+.+...
T Consensus 1089 ~~~~~~~~~~~~~~~~~~~e~~rd~~~~~~~k~~~~------~~~~~~~~l~~~~P~~l~~~~~~l~~l~~~~~~~~~p~ 1162 (1354)
T 3lxu_X 1089 SSGSPASPKKGKANADDYAESFRDFQCSQIVKCELE------MAEKIYNDVVAAHPKHLQANLLLIQNIESNQLKSQLPL 1162 (1354)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHHHTTSCHH------HHHHHHHHHHHHCTTCTHHHHHHHHHHHHHSSCCCCHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 566767765567768999999988888888623867------89999999998787647999999986641222014652
Q ss_pred -------------------CC------CCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -------------------75------40088999999999980797799968225689994789999763899699999
Q 000658 1181 -------------------DK------IHHYEEVIDAANEVVDSIDQDELAKFFSQKSDPEDEETEKIKKKMETTRDQLA 1235 (1368)
Q Consensus 1181 -------------------~~------~~~~~~ii~~ad~vi~~id~~~l~~~~~~k~d~~~~~a~~~k~~m~~~k~~li 1235 (1368)
|+ ++++++||++||+||++|||+|||+|||+|+|+| +||+|+|++|||||++||
T Consensus 1163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~ad~vi~~id~~~l~~~~g~k~d~~-~~a~k~k~~m~~~k~~l~ 1241 (1354)
T 3lxu_X 1163 TFVNAQKTSPPEAGESADKQKEDQKKVRSALERIVKLADKVIQETDSEALLSYYGLKNDTR-ADAAKIKTNMDKQKNTLI 1241 (1354)
T ss_dssp HHHHTTSCCCSSCTTHHHHTTHHHHHHHHHHHHHHHHHHHTTCHHHHTTTSTTCCSTHHHH-CSSSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC-HHHHHHHHHHHHHHHHHH
T ss_conf 1112333444332222233202345678889999999999998459989999856778996-278999988999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCHHHHH
Q ss_conf 99999999852133310456763223478766888899902499999999851014799842620566999917686899
Q 000658 1236 EALYQKALAMLEIESLKGEKSGAEAATEGTTDVDKTSDSQPDLFEENFKELKKWADVKSPKYGSLLVLREKRCGRLGTAL 1315 (1368)
Q Consensus 1236 ~AL~~k~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~kw~d~~d~k~~~~~~~~~~~~~~~g~al 1315 (1368)
|||||||+|||+++.+... ...++++|+++|+||+||+|++|+||++|++||+++++||||||
T Consensus 1242 ~al~~k~~ala~~~~~~~~-----------------~~~~~~~~~~~~~el~k~~d~~d~k~~~~~~~~~~~~~~~g~~~ 1304 (1354)
T 3lxu_X 1242 EALSKKGIAVAKLAVLDDC-----------------IKDSLAEINELYTEIIKFVDANDSKAIQFALWHAYAHGHYGRMY 1304 (1354)
T ss_dssp HHHHHHHHHHHHHHHHHTC-----------------SGGGHHHHHHHHHHHTTSSCTTSTTTHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998864300-----------------35689999999999876104678623144899999988899999
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99996520389994788999999999991991589999862000379999999
Q 000658 1316 KVLGDIIQDDSEPPKKKLYELKISLLEELGWSHLTTYEKLWMHVRFPPSLPLF 1368 (1368)
Q Consensus 1316 k~l~k~~~~~~~~~~k~~~~~~~~l~~~lgw~h~~~~~~~~~~~~~p~~~~~F 1368 (1368)
|+|+|++||+ ++|++++++++|+++|||+||++|+++|+++|||++||||
T Consensus 1305 k~l~k~~~~k---~~~~~~~~~~~~~~~l~w~h~~~~~~~~~~~~~p~~~~~f 1354 (1354)
T 3lxu_X 1305 KYVVKLIEEK---RTRDHFVELAAINGALGHEHIRTVINRMMITAFPSSFRLF 1354 (1354)
T ss_dssp HHHHHHHHHT---CCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCC
T ss_pred HHHHHHHHCC---CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999987413---3178999999999975988999999865656475658999
No 2
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=1.00 E-value=1 Score=450.14 Aligned_cols=367 Identities=20% Similarity=0.266 Sum_probs=251.6
Q ss_pred CCCCCHHHHHHHHHCCCC----CCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 999919899999864699----9998643127973999996049999767722599999999959992999686899999
Q 000658 348 DSSPHGTHVAGIATAFNP----EEPLLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEHKCDLINMSYGEPTLL 423 (1368)
Q Consensus 348 D~~gHGThVAGIIAg~~~----n~~g~~GVAP~AkIi~vKV~d~~~gs~et~s~ii~Ai~~Ai~~gadVINmS~G~~~~~ 423 (1368)
|..+|||||||||||+.. ++.++.||||+|+|+++|+++..+.+ ....++++||+||+++++||||||||....+
T Consensus 84 D~~gHGThVAgiiAg~~~~~~~~~~~~~GvAP~A~l~~~kv~~~~g~~-~~~~~i~~Ai~~Ai~~gvdVIn~SlG~~~~~ 162 (926)
T 1xf1_A 84 VDQEHGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLA-DYARNYAQAIRDAINLGAKVINMSFGNAALA 162 (926)
T ss_dssp CSSTTTTHHHHSSCCCCCCCCSCSCCTTTTCTTSEEEEEECCCCSCHH-HHHHHHHHHHHHHHHTTCEEEEECCSSCCCT
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCC-CCHHHHHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 989857899899867886676667746897888889999921389988-7289999999999981991999798789887
Q ss_pred -CCHHHHHHHHHHHHHCCCCEEEEECCCCCC-------------CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC----
Q ss_conf -983799999999997399499994389999-------------99987899999998499943327210147631----
Q 000658 424 -PDYGRFIDLVNEAVNKHRLVFVSSAGNSGP-------------ALNTVGAPGGTSSSIIAVGAYVSPAMAAGAHC---- 485 (1368)
Q Consensus 424 -~~~~~~~~~a~e~a~~~GVIvV~AAGN~G~-------------~~~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~---- 485 (1368)
......+..+.+.+.++|+++|+||||+|+ ...++++|+ .++++|+|||++..........
T Consensus 163 ~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA-~~~~vitVgA~~~~~~~~~~~~~~~~ 241 (926)
T 1xf1_A 163 YANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPA-AADSTLTVASYSPDKQLTETVRVKTA 241 (926)
T ss_dssp TCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCT-TTCCSEEEEEEBCSEEEEEEEEEECT
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCC-CCCCEEEEECCCCCCCCCCCEEEECC
T ss_conf 65556089999999974896899928988876775555434578742323766-68865999056566544211699837
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 000658 486 -------------------------------------------------------------------------------- 485 (1368)
Q Consensus 486 -------------------------------------------------------------------------------- 485 (1368)
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~lv~~~~g~~~~~~~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~ 321 (926)
T 1xf1_A 242 DQQDKEMPVLSTNRFEPNKAYDYAYANRGTKEDDFKDVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIE 321 (926)
T ss_dssp TSCEEEEEEEEESCCCTTCCEEEEECTTSCSTTTTTTCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEE
T ss_pred CCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC
T ss_conf 87640368772377788865788988888783306543880999989988899999999967971999983677773001
Q ss_pred -----------------------------------CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCC
Q ss_conf -----------------------------------126999998310279998999997428994498122103668881
Q 000658 486 -----------------------------------VVEPPSEGLEYTWSSRGPTADGDLGVCISAPGGAVAPVSTWTLQR 530 (1368)
Q Consensus 486 -----------------------------------v~~~~~~g~~s~fSS~Gp~~DG~ikpDI~APG~~I~s~~~~~~~~ 530 (1368)
.......+.++.||||||+.++++||||+|||++| +..+..+.
T Consensus 322 ~~~~~~iP~~~i~~~~g~~l~~~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~~~~lKPDI~APG~~I--~sa~~~~~ 399 (926)
T 1xf1_A 322 LPNVDQMPAAFISRKDGLLLKDNPQKTITFNATPKVLPTASGTKLSRFSSWGLTADGNIKPDIAAPGQDI--LSSVANNK 399 (926)
T ss_dssp CCCSTTCCEEEECHHHHHHHHHCSSCEEEECSSCEEEECSSCSBCCTTSCCCBCTTSCBSCCEEEECCCE--EESSSCSS
T ss_pred CCCCCCCCEEEEEHHHHHHHHHCCCEEEEECCCCEECCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCE--EEECCCCC
T ss_conf 5766423179985899999972894599855651121467766550236789898886073398899887--80116996
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH----HHHHHHHCCCCCCCC----CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 120489971268887999999898661799999999----999998239558988----889885433404998999999
Q 000658 531 RMLMNGTSMASPSACGGIALLISAMKANAIPVSPYT----VRKAVENTSVPIGAL----AEDKLSTGHGLLQVDKAYEYV 602 (1368)
Q Consensus 531 ~~~~sGTSmAAP~VAGaaALLlsa~k~~~p~ltp~~----Ik~lL~~TA~~~~~~----~~~~~~~G~GlIdv~kAv~~l 602 (1368)
|..++|||||||||||++|||+|++++.+|.|+|.+ ||.+|++||+++... .++++.||+|+||+.+|++.-
T Consensus 400 y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~ 479 (926)
T 1xf1_A 400 YAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDEDEKAYFSPRQQGAGAVDAKKASAAT 479 (926)
T ss_dssp SCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGGGTEECCHHHHTTCBCCHHHHHHCS
T ss_pred CEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCCC
T ss_conf 05637640567899999999999876118887877889999999985387765688873177103277702998965887
Q ss_pred H---HCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEE
Q ss_conf 9---5399982458999704899887300299813888885079999963210478787555447127899831797459
Q 000658 603 Q---QYGNVPCVSYQIKINQSGKLTPTYRGIYLRDAGASQQSTEWTVQVEPKFHEDASNLEELVPFEECIELHSTDKAVL 679 (1368)
Q Consensus 603 ~---~~~~~p~~~~~vsv~~~~~~~~~~rgIylR~~~~~~~~~~~tv~v~p~f~~~~~~~~~~~~~~~~v~l~~~~~~wV 679 (1368)
. .....+ -.+.+.... ......+.++|........+|.+++...-..+ ..+... --.|....+..|
T Consensus 480 ~~l~~~~~~~---~~i~l~~~~--~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~-----~~~~v~-p~~l~~~~~~~v 548 (926)
T 1xf1_A 480 MYVTDKDNTS---SKVHLNNVS--DKFEVTVNVHNKSDKPQELYYQATVQTDKVDG-----KHFALA-PKVLYETSWQKI 548 (926)
T ss_dssp EEEEESSSSC---SCEEEEEEC--SEEEEEEEEEECSSSCEEEEEEEEEEEEEEET-----TEEEEE-EEEEEECCCEEE
T ss_pred EEEECCCCCC---CEEECCCCC--CCEEEEEEEEEECCCCEEEEEEEEEEECCCCC-----CEEEEC-CCEEEECCCCEE
T ss_conf 6997689875---414526567--60899999998279962699999998436788-----348853-553575268759
Q ss_pred ECCCCEEECCCCEEEEEEECCCC--------CCCC-EEEEEEEEEECCCCCCCCEEEEEEEEEECC
Q ss_conf 72751330488469999991899--------9997-069999999558999997289979999034
Q 000658 680 RAPEYLLLTHNGRSFNVVVDPTN--------LEDG-LHYYEIYGIDCKAPGRGPLFRIPVTIIKPT 736 (1368)
Q Consensus 680 ~vp~~~~l~~~~~~~~V~vDp~~--------L~~G-~h~~~i~~~D~~~~~~g~~~~IPvTvv~P~ 736 (1368)
++|+ ++..+|+|+++++. ++.| .+++.|...+.. ..++.++||+.+....
T Consensus 549 tv~a-----g~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~--~~~~~v~~P~~~~~g~ 607 (926)
T 1xf1_A 549 TIPA-----NSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDP--TKEELMSIPYIGFRGD 607 (926)
T ss_dssp EECT-----TEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESST--TSCCCEEEEEEEEESC
T ss_pred EECC-----CCEEEEEEEEECCCCCHHHCCCCCCCCEEEEEEEEEECC--CCCCEEEEEEEEEECC
T ss_conf 9899-----998999999974765501013466871799999999589--9877899666999637
No 3
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=1.00 E-value=1 Score=406.49 Aligned_cols=246 Identities=23% Similarity=0.256 Sum_probs=191.4
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCC--------CCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 47899991989999986469999--------9864312797399999604999976772259999999995999299968
Q 000658 345 IVTDSSPHGTHVAGIATAFNPEE--------PLLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEHKCDLINMS 416 (1368)
Q Consensus 345 ~~~D~~gHGThVAGIIAg~~~n~--------~g~~GVAP~AkIi~vKV~d~~~gs~et~s~ii~Ai~~Ai~~gadVINmS 416 (1368)
.+.|++||||||||||||+..++ ..+.||||+|+|+.+|++...+ + ..++++.|+++|+++++||||||
T Consensus 87 ~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~--~~~di~~a~~~a~~~g~dVin~S 163 (621)
T 3vta_A 87 GPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDG-C--SDTDILAAYDDAIADGVDIISLS 163 (621)
T ss_dssp SSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTE-E--CHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCC-C--CHHHHHHHHHHHHHHCCCEEEEC
T ss_conf 98878927789999985767777663454666678888999799999114899-9--77999999999997299899826
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC----------------
Q ss_conf 6899999983799999999997399499994389999999878999999984999433272101----------------
Q 000658 417 YGEPTLLPDYGRFIDLVNEAVNKHRLVFVSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMA---------------- 480 (1368)
Q Consensus 417 ~G~~~~~~~~~~~~~~a~e~a~~~GVIvV~AAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~---------------- 480 (1368)
||+..........+..+...+.++|+++|+||||+|+...+++.++ +++++|++.......
T Consensus 164 lG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a---~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s 240 (621)
T 3vta_A 164 VGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLS---PWLLSVAASTMDRKFVTQVQIGNGQSFQGVS 240 (621)
T ss_dssp CCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCC---TTSEEEEEECCSEEEEEEEEETTSCEEEEBC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC---CCCEEEEEEECCCCCEEEEEECCCCEEEEEE
T ss_conf 7788777767759999999998789889994788888874047788---8741688760365402247732574054235
Q ss_pred ------------------------------------------------------------CCCCC---------------
Q ss_conf ------------------------------------------------------------47631---------------
Q 000658 481 ------------------------------------------------------------AGAHC--------------- 485 (1368)
Q Consensus 481 ------------------------------------------------------------~~~~~--------------- 485 (1368)
.+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~~~~~~~~~~~Ga~gvi~~~~~~~~~~~~~ 320 (621)
T 3vta_A 241 INTFDNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRDYADSYP 320 (621)
T ss_dssp CCCSCCEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCCCHHHHHHHHTTCSEEEEECSCCSSCCCCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCEEEEEEEECCCCCCCCCC
T ss_conf 03578864321025534545556543232466665531323309998147771677665156049999734777666645
Q ss_pred --------------------------------CCCCCCCCCCCCCCCCCCCC--CCCCCEEEEECCCCEEEC-CCC----
Q ss_conf --------------------------------12699999831027999899--999742899449812210-366----
Q 000658 486 --------------------------------VVEPPSEGLEYTWSSRGPTA--DGDLGVCISAPGGAVAPV-STW---- 526 (1368)
Q Consensus 486 --------------------------------v~~~~~~g~~s~fSS~Gp~~--DG~ikpDI~APG~~I~s~-~~~---- 526 (1368)
.......+.++.||||||+. ++.+||||+|||.+|.+. +..
T Consensus 321 lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~ 400 (621)
T 3vta_A 321 LPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVG 400 (621)
T ss_dssp SSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCSSSCBT
T ss_pred CCEEEECHHHHHHHHHHHHCCCCCCEEEECCEEECCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCC
T ss_conf 42599779999999999862677506872225750578872444057798887787206630368865675447665666
Q ss_pred ---CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCCHHHHHH
Q ss_conf ---8881120489971268887999999898661799999999999998239558988--8898854334049989999
Q 000658 527 ---TLQRRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGAL--AEDKLSTGHGLLQVDKAYE 600 (1368)
Q Consensus 527 ---~~~~~~~~sGTSmAAP~VAGaaALLlsa~k~~~p~ltp~~Ik~lL~~TA~~~~~~--~~~~~~~G~GlIdv~kAv~ 600 (1368)
....|..++|||||||||||++|||+|+ +|.|+|.+||.+|++||.++... +..++.+|+|+||+.+|++
T Consensus 401 ~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~----~P~~spa~IksaLmtTA~~~~~~~~~~~~~~~GaG~v~~~~A~~ 475 (621)
T 3vta_A 401 GIRRNTLFNIISGTSMSCPHITGIATYVKTY----NPTWSPAAIKSALMTTASPMNARFNPQAEFAYGSGHVNPLKAVR 475 (621)
T ss_dssp TBCCCCSEEEECSHHHHHHHHHHHHHHHHHH----CTTCCHHHHHHHHHHTCBCCCTTTCTTTHHHHTTCBCCHHHHSC
T ss_pred CCCCCCCCEEECCCCCCCHHHHHHHHHHHHH----CCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCHHHHCC
T ss_conf 7678875057437664215466689999977----89999999999998548766666787870312777438778248
No 4
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=1.00 E-value=1 Score=404.53 Aligned_cols=366 Identities=22% Similarity=0.262 Sum_probs=236.7
Q ss_pred CCCCCCCHHHHHHHHHCCCCCCC--------CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 78999919899999864699999--------8643127973999996049999767722599999999959992999686
Q 000658 346 VTDSSPHGTHVAGIATAFNPEEP--------LLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEHKCDLINMSY 417 (1368)
Q Consensus 346 ~~D~~gHGThVAGIIAg~~~n~~--------g~~GVAP~AkIi~vKV~d~~~gs~et~s~ii~Ai~~Ai~~gadVINmS~ 417 (1368)
+.|.+||||||||||||+..++. .+.||||+|+|+++|+++..+ + ...++++||+||+++++|||||||
T Consensus 97 ~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~--~~~~i~~Ai~~A~~~gvdVIn~Sl 173 (649)
T 3i6s_A 97 ARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG-T--FTSDLIAAMDQAVADGVDMISISY 173 (649)
T ss_dssp SBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE-E--CHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCC-C--CHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 8889985899999986877768663344667546787888899983347889-8--899999999999976997999587
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC-----------------
Q ss_conf 899999983799999999997399499994389999999878999999984999433272101-----------------
Q 000658 418 GEPTLLPDYGRFIDLVNEAVNKHRLVFVSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMA----------------- 480 (1368)
Q Consensus 418 G~~~~~~~~~~~~~~a~e~a~~~GVIvV~AAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~----------------- 480 (1368)
|.... +.....+..+...+.++|+++|+||||+|+...++. . ..+++|+|||.......
T Consensus 174 G~~~~-~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~--~-~ap~vitVgAst~dr~f~~~~~lgng~~~~g~sl 249 (649)
T 3i6s_A 174 GYRFI-PLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLN--N-GSPWILCVASGHTDRTFAGTLTLGNGLKIRGWSL 249 (649)
T ss_dssp CCCSC-CGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCS--C-CCTTSEEEEEEECSCEEEEEEEETTSCEEEEECC
T ss_pred CCCCC-CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC--C-CCCCEEEEEEEECCCCEEEEEEECCCCEEEEEEC
T ss_conf 66776-420269999999998499489995888899878557--8-8994689966511553036899279857865642
Q ss_pred ---------------------------------CCCC-------------------------------------------
Q ss_conf ---------------------------------4763-------------------------------------------
Q 000658 481 ---------------------------------AGAH------------------------------------------- 484 (1368)
Q Consensus 481 ---------------------------------~~~~------------------------------------------- 484 (1368)
.+..
T Consensus 250 ~~~~~~~~~~plv~~~~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~P~ 329 (649)
T 3i6s_A 250 FPARAFVRDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPGVFRSATFPNPG 329 (649)
T ss_dssp CSSCBCEEEEEEECCTTTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGGGGGCCCCCSCE
T ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCE
T ss_conf 56766676035686466443565545654213488489992798618888888975584378972475433565676877
Q ss_pred -----------------------------CCCCCCCCCCCCCCCCCCCCCC--CCCCEEEEECCCCEEECCCC-------
Q ss_conf -----------------------------1126999998310279998999--99742899449812210366-------
Q 000658 485 -----------------------------CVVEPPSEGLEYTWSSRGPTAD--GDLGVCISAPGGAVAPVSTW------- 526 (1368)
Q Consensus 485 -----------------------------~v~~~~~~g~~s~fSS~Gp~~D--G~ikpDI~APG~~I~s~~~~------- 526 (1368)
.+......+.++.||||||..+ +.+||||+|||.+|.+....
T Consensus 330 ~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~ 409 (649)
T 3i6s_A 330 VVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSI 409 (649)
T ss_dssp EEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEE
T ss_pred EEECHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCC
T ss_conf 99748897999999865898459996253250467788522368989987788865885995888868535798776655
Q ss_pred -----CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC-----------CCCCCCCCC
Q ss_conf -----8881120489971268887999999898661799999999999998239558988-----------889885433
Q 000658 527 -----TLQRRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGAL-----------AEDKLSTGH 590 (1368)
Q Consensus 527 -----~~~~~~~~sGTSmAAP~VAGaaALLlsa~k~~~p~ltp~~Ik~lL~~TA~~~~~~-----------~~~~~~~G~ 590 (1368)
....|..++|||||+|||||++|||+|+ +|.|+|.+||.+|++||.+++.. +..++.||+
T Consensus 410 ~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~----~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~~~~a~~~~~Ga 485 (649)
T 3i6s_A 410 GTNILLSTDYILESGTSMAAPHAAGIAAMLKAA----HPEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGA 485 (649)
T ss_dssp TTTEEECCSEEEECSHHHHHHHHHHHHHHHHHH----STTCCHHHHHHHHHHTCBCBCTTSSBCEETTTSSBCCHHHHTT
T ss_pred CCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHH----CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 665446664032466420068788999999875----7899999999999630635467898421356677577677980
Q ss_pred CCCCHHHHHH-----------HHHHCCCCCCEEEEEEE------E--CC-CCCCCCCEEEEEEC-CCCCCCE--EEEEEE
Q ss_conf 4049989999-----------99953999824589997------0--48-99887300299813-8888850--799999
Q 000658 591 GLLQVDKAYE-----------YVQQYGNVPCVSYQIKI------N--QS-GKLTPTYRGIYLRD-AGASQQS--TEWTVQ 647 (1368)
Q Consensus 591 GlIdv~kAv~-----------~l~~~~~~p~~~~~vsv------~--~~-~~~~~~~rgIylR~-~~~~~~~--~~~tv~ 647 (1368)
|+||+.+|++ |+.-........-.+.. . ++ ....-+.-.|.+.+ ....... .+++-+
T Consensus 486 G~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rt 565 (649)
T 3i6s_A 486 GHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSNPSADLNYPSFIALYSIEGNFTLLEQKFKRT 565 (649)
T ss_dssp CBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCCCCCCCCCSSEEEEECCSSCCCCEEEEEEEE
T ss_pred EEECHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCEEEEEEE
T ss_conf 55479996595632447730678864147998222225635877677888642347884780235688775430899988
Q ss_pred EEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEC-CCCEEEC--CCCEEEEEEECCCCCC-CCEEEEEEEEEECCCCCCC
Q ss_conf 6321047878755544712789983179745972-7513304--8846999999189999-9706999999955899999
Q 000658 648 VEPKFHEDASNLEELVPFEECIELHSTDKAVLRA-PEYLLLT--HNGRSFNVVVDPTNLE-DGLHYYEIYGIDCKAPGRG 723 (1368)
Q Consensus 648 v~p~f~~~~~~~~~~~~~~~~v~l~~~~~~wV~v-p~~~~l~--~~~~~~~V~vDp~~L~-~G~h~~~i~~~D~~~~~~g 723 (1368)
|+-+- . . ....++.+......-|+| |..+... +...+|.|++..+... .+..++.+.-.|.. ..
T Consensus 566 vtnvg----~---~--~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w~~~~---~~ 633 (649)
T 3i6s_A 566 VTNVG----K---G--AATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQN---GN 633 (649)
T ss_dssp EEECC-----------CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEEEETT---SC
T ss_pred EEEEC----C---C--CCEEEEEEECCCCCEEEEECCEEEEECCCCEEEEEEEEEECCCCCCCEEEEEEEEECCC---CC
T ss_conf 99717----9---9--85899999069997899988978981189889999999964357886589999998389---97
Q ss_pred CEEEEEEEEEE
Q ss_conf 72899799990
Q 000658 724 PLFRIPVTIIK 734 (1368)
Q Consensus 724 ~~~~IPvTvv~ 734 (1368)
...|+|+.|..
T Consensus 634 h~vrsPi~v~~ 644 (649)
T 3i6s_A 634 HSVRSPIVTSP 644 (649)
T ss_dssp CEEEEEEEEEE
T ss_pred EEEEEEEEEEE
T ss_conf 69987599997
No 5
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=1.00 E-value=1 Score=398.55 Aligned_cols=273 Identities=29% Similarity=0.350 Sum_probs=219.7
Q ss_pred EECCC----CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 64489----81999994999999999898588887778733346664335766432232136887323478999919899
Q 000658 281 VWHDG----EVWRVALDTQSLEDEPDHGKLADFAPLTNYKTERKHGVFSKLDACTFVANVYDEGNVLSIVTDSSPHGTHV 356 (1368)
Q Consensus 281 vw~~G----gV~VAVIDTGI~~~d~~~~dL~~~~~l~~y~~~~~~g~f~~~d~~~~~~n~~d~gn~~~~~~D~~gHGThV 356 (1368)
+|..| +|+||||||| +|+.|++|.+... ..++|. ++. ..+.|+++|||||
T Consensus 131 ~~~~g~~G~gv~VaViDtG---id~~Hpdl~~~i~----------------~~~d~~----~~~---~~~~D~~gHGThV 184 (539)
T 3afg_A 131 MWNLGYDGSGITIGIIDTG---IDASHPDLQGKVI----------------GWVDFV----NGK---TTPYDDNGHGTHV 184 (539)
T ss_dssp CBCCSCCCTTCEEEEEESB---CCTTSGGGTTTEE----------------EEEETT----TCC---SSCCBSSSHHHHH
T ss_pred HHHCCCCCCCCEEEEEECC---CCCCCHHHHCCEE----------------EEEECC----CCC---CCCCCCCCCHHHH
T ss_conf 7735789998289999258---7789957848886----------------458787----898---9988999888899
Q ss_pred HHHHHCCCCCCC-CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHC----CCCEEEECCCCCCCCCCHHHHHH
Q ss_conf 999864699999-8643127973999996049999767722599999999959----99299968689999998379999
Q 000658 357 AGIATAFNPEEP-LLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEH----KCDLINMSYGEPTLLPDYGRFID 431 (1368)
Q Consensus 357 AGIIAg~~~n~~-g~~GVAP~AkIi~vKV~d~~~gs~et~s~ii~Ai~~Ai~~----gadVINmS~G~~~~~~~~~~~~~ 431 (1368)
||||||.+++.. .+.||||+|+|+++|+++..+.+ +..+++++|+|++++ +++|||||||........ ..+.
T Consensus 185 Agiiag~~~~~~g~~~GvAp~A~l~~~kv~~~~g~~--~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~-~~l~ 261 (539)
T 3afg_A 185 ASIAAGTGAASNGKYKGMAPGAKLVGIKVLNGQGSG--SISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGT-DSLS 261 (539)
T ss_dssp HHHHHCCCGGGTTTTCCSCTTCEEEEEECSCTTSEE--EHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSC-SHHH
T ss_pred HHHHHCCCCCCCCCEEEECCCCEEEEEEEECCCCCC--CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-HHHH
T ss_conf 999858675677988998889989999735699986--8899999999998632532985899588888888643-3999
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 99999973994999943899999998789999999849994332721014763112699999831027999899999742
Q 000658 432 LVNEAVNKHRLVFVSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGV 511 (1368)
Q Consensus 432 ~a~e~a~~~GVIvV~AAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~~s~fSS~Gp~~DG~ikp 511 (1368)
.+.+.+.++|+++|+||||+|+...++.+|+ ..+++|+|||++ ..+.++.|||+||+.++++||
T Consensus 262 ~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa-~~~~vitVgA~~---------------~~~~~a~fSs~Gp~~~~~~kp 325 (539)
T 3afg_A 262 QAVNNAWDAGLVVVVAAGNSGPNKYTVGSPA-AASKVITVGAVD---------------KYDVITDFSSRGPTADNRLKP 325 (539)
T ss_dssp HHHHHHHHTTCEEEEECCSCCSSSSCCCTTT-TCSSSEEEEEEC---------------TTSCBCSSSCCCCCTTCBCCC
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCCCC-CCCCEEEEEEEC---------------CCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999998669889997888899777644776-678558996541---------------776534334778887778766
Q ss_pred EEEECCCCEEECCCC---CC----CCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 899449812210366---88----81120489971268887999999898661799999999999998239558988889
Q 000658 512 CISAPGGAVAPVSTW---TL----QRRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGALAED 584 (1368)
Q Consensus 512 DI~APG~~I~s~~~~---~~----~~~~~~sGTSmAAP~VAGaaALLlsa~k~~~p~ltp~~Ik~lL~~TA~~~~~~~~~ 584 (1368)
||+|||.+|.+.... .. ..|..++|||||||||||++|||+|. +|.+++.+||.+|++||++++....+
T Consensus 326 di~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~p~~s~~~vk~~L~~tA~~~~~~~~~ 401 (539)
T 3afg_A 326 EVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQA----HPSWTPDKVKTALIETADIVKPDEIA 401 (539)
T ss_dssp SEEEECSSEEEECCTTCCCSEECSSSEEEECSHHHHHHHHHHHHHHHHHH----CTTCCHHHHHHHHHHHSBCSSGGGCS
T ss_pred CEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH----CCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 67558688882036887778887665546676478889999999999987----79999999999999629347888998
Q ss_pred CCCCCCCCCCHHHHHHHH
Q ss_conf 885433404998999999
Q 000658 585 KLSTGHGLLQVDKAYEYV 602 (1368)
Q Consensus 585 ~~~~G~GlIdv~kAv~~l 602 (1368)
...+|||++|+.+|+...
T Consensus 402 ~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 402 DIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp BTTTBTCBCCHHHHHTGG
T ss_pred CCCCCCCCCCHHHHHHHC
T ss_conf 567557811799996100
No 6
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=1.00 E-value=1 Score=386.55 Aligned_cols=237 Identities=23% Similarity=0.296 Sum_probs=195.5
Q ss_pred CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCC---CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 899991989999986469999986431279739999960499997---67722599999999959992999686899999
Q 000658 347 TDSSPHGTHVAGIATAFNPEEPLLNGIAPGAQLISCKIGDTRLGS---METGTGLTRAFIAAVEHKCDLINMSYGEPTLL 423 (1368)
Q Consensus 347 ~D~~gHGThVAGIIAg~~~n~~g~~GVAP~AkIi~vKV~d~~~gs---~et~s~ii~Ai~~Ai~~gadVINmS~G~~~~~ 423 (1368)
.|.++|||||||||+|..++ ++.||||+|+|+++|++....+. .....+++++++|+++++++|||||||.....
T Consensus 104 ~D~~gHGThVAGiiag~~~~--g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~~ 181 (357)
T 4h6x_A 104 IVLNDHACHVTSTIVGQEHS--PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANIIHCAFCRPTQT 181 (357)
T ss_dssp HHHHHHHHHHHHHHHCCTTS--SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTCSEEEEC-------
T ss_pred CCCCCCHHHHHHHHHCCCCC--CCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 67788679998987415788--7058601014876641026788854432499999999999974998785134467765
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98379999999999739949999438999999987899999998499943327210147631126999998310279998
Q 000658 424 PDYGRFIDLVNEAVNKHRLVFVSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGP 503 (1368)
Q Consensus 424 ~~~~~~~~~a~e~a~~~GVIvV~AAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~~s~fSS~Gp 503 (1368)
......+..+++.+.++|+++|+||||+|.. ...+|+ ..+++|+|||++ ..+.++.|||+|+
T Consensus 182 ~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~--~~~~Pa-~~~~vi~Vga~~---------------~~~~~~~fSn~G~ 243 (357)
T 4h6x_A 182 SEGEEILVQAIKKCQDNNVLIVSPTGNNSNE--SWCLPA-VLPGTLAVGAAK---------------VDGTPCHFSNWGG 243 (357)
T ss_dssp ----CHHHHHHHHHHHTTCEEEEECC------------------CEEEEEEC---------------TTSSBCTTCC---
T ss_pred CCCHHHHHHHHHHHHHCCEEEEECCCCCCCC--CCCCCC-CCCCCCEEEEEC---------------CCCCCCCCCCCCC
T ss_conf 4410679999999862885899622578987--675765-589971578743---------------6886334256788
Q ss_pred CCCCCCCEEEEECCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC-
Q ss_conf 9999974289944981221036688811204899712688879999998986617999999999999982395589888-
Q 000658 504 TADGDLGVCISAPGGAVAPVSTWTLQRRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGALA- 582 (1368)
Q Consensus 504 ~~DG~ikpDI~APG~~I~s~~~~~~~~~~~~sGTSmAAP~VAGaaALLlsa~k~~~p~ltp~~Ik~lL~~TA~~~~~~~- 582 (1368)
. ..+|||+|||.+|.+... ..+.+..++|||||||+|||++|||++.+++.+|.+++.+||.+|++||++++...
T Consensus 244 ~---~~~~di~APG~~i~s~~~-~~~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~~ 319 (357)
T 4h6x_A 244 N---NTKEGILAPGEEILGAQP-CTEEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEVV 319 (357)
T ss_dssp C---TTTTEEEEECSSEEECCT-TCSCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC---------
T ss_pred C---CCCCCEEECCCCEEECCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 8---776526616787674258-998544058189999999999999999608657998799999999943956899888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 8988543340499899999995399
Q 000658 583 EDKLSTGHGLLQVDKAYEYVQQYGN 607 (1368)
Q Consensus 583 ~~~~~~G~GlIdv~kAv~~l~~~~~ 607 (1368)
.....+|||+||+.+|++.+.....
T Consensus 320 ~~~~~~G~G~vn~~~A~~~~~~~~~ 344 (357)
T 4h6x_A 320 EEPERCLRGFVNIPGAMKVLFGQPS 344 (357)
T ss_dssp -----CTTCBCCHHHHHHHHHSCCC
T ss_pred CCCCCCEEEEECHHHHHHHHHCCCC
T ss_conf 8766540477529999999767985
No 7
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=1.00 E-value=1 Score=379.92 Aligned_cols=263 Identities=25% Similarity=0.291 Sum_probs=207.1
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 8981999994999999999898588887778733346664335766432232-136887323478999919899999864
Q 000658 284 DGEVWRVALDTQSLEDEPDHGKLADFAPLTNYKTERKHGVFSKLDACTFVAN-VYDEGNVLSIVTDSSPHGTHVAGIATA 362 (1368)
Q Consensus 284 ~GgV~VAVIDTGI~~~d~~~~dL~~~~~l~~y~~~~~~g~f~~~d~~~~~~n-~~d~gn~~~~~~D~~gHGThVAGIIAg 362 (1368)
..+|+||||||| +|..|+||.+... ..|+ +..+ ..+.+ .+..|.++|||||||||||
T Consensus 153 G~gV~VAVIDTG---Vd~~HpdL~~~~~-~g~~---------------~~~~~~~p~~---~d~~d~~gHGThVAGiIAa 210 (671)
T 1r6v_A 153 GTNIIVAVVDTG---VDGTHPDLEGQVI-AGYR---------------PAFDEELPAG---TDSSYGGSAGTHVAGTIAA 210 (671)
T ss_dssp CTTCEEEEEESC---CBTTSGGGTTTBC-CEEE---------------GGGTEEECTT---CBCCTTCSHHHHHHHHHHC
T ss_pred CCCCEEEEEECC---CCCCCCCCCCCEE-ECCC---------------CCCCCCCCCC---CCCCCCCCCCHHHHHHHHC
T ss_conf 999789999589---8988841015577-1454---------------5678757888---8876678843212016341
Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCC----CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 69999986431279739999960499----99767722599999999959992999686899999983799999999997
Q 000658 363 FNPEEPLLNGIAPGAQLISCKIGDTR----LGSMETGTGLTRAFIAAVEHKCDLINMSYGEPTLLPDYGRFIDLVNEAVN 438 (1368)
Q Consensus 363 ~~~n~~g~~GVAP~AkIi~vKV~d~~----~gs~et~s~ii~Ai~~Ai~~gadVINmS~G~~~~~~~~~~~~~~a~e~a~ 438 (1368)
.. |+.++.||||+|+|+++|+++.. +++......++++|.||++++++|||||||.... ...++.+++.+.
T Consensus 211 ~~-ng~gv~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~~----s~~l~~Ai~~A~ 285 (671)
T 1r6v_A 211 KK-DGKGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWGY----SYTMKEAFDYAM 285 (671)
T ss_dssp CC-SSSSCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSCC----CHHHHHHHHHHH
T ss_pred CC-CCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC----CHHHHHHHHHHH
T ss_conf 57-8886177878998999991067655678874688999999999998699799957878877----899999999998
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCEEEEE
Q ss_conf 39949999438999999987899999998499943327210147631126999998---310279998999997428994
Q 000658 439 KHRLVFVSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGL---EYTWSSRGPTADGDLGVCISA 515 (1368)
Q Consensus 439 ~~GVIvV~AAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~---~s~fSS~Gp~~DG~ikpDI~A 515 (1368)
++|+++|+||||+|... ...+|+ ..+++|+|||++ ..+. ++.||++||. +||+|
T Consensus 286 ~~GvlvVaAAGN~g~~~-~~~yPA-~~~~VItVgA~d---------------~~g~~~~~a~fSn~G~~------vdv~A 342 (671)
T 1r6v_A 286 EHGVVMVVSAGNNTSDS-HHQYPA-GYPGVIQVAALD---------------YYGGTFRVAGFSSRSDG------VSVGA 342 (671)
T ss_dssp HTTCEEEEECCSCSSSC-CCCBTT-TSTTCEEEEEEE---------------EETTEEEECSSSCCCTT------EEEEE
T ss_pred HCCCEEEEECCCCCCCC-CCCCCC-CCCCEEEEEEEC---------------CCCCCEEECCCCCCCCC------EEEEE
T ss_conf 68988999578888777-766755-578759999886---------------79984123564689997------26995
Q ss_pred CCCCEEEC-CCC---------------CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 49812210-366---------------88811204899712688879999998986617999999999999982395589
Q 000658 516 PGGAVAPV-STW---------------TLQRRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIG 579 (1368)
Q Consensus 516 PG~~I~s~-~~~---------------~~~~~~~~sGTSmAAP~VAGaaALLlsa~k~~~p~ltp~~Ik~lL~~TA~~~~ 579 (1368)
||.+|.+. +.. ..+.|..++|||||||||||++|||+|. +|.++|.+||++|++||.+++
T Consensus 343 PG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~----~P~lt~~~Vr~~L~~TA~~~~ 418 (671)
T 1r6v_A 343 PGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQK----FPNAKPWQIRKLLENTAFDFN 418 (671)
T ss_dssp ECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHH----CTTCCHHHHHHHHHHHCBCSS
T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH----CCCCCHHHHHHHHHHHCCCCC
T ss_conf 6877785157877655456654211258986487647637889999999999977----889999999999997583778
Q ss_pred CCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 8888988543340499899999
Q 000658 580 ALAEDKLSTGHGLLQVDKAYEY 601 (1368)
Q Consensus 580 ~~~~~~~~~G~GlIdv~kAv~~ 601 (1368)
..+ .+..+|||++|+.+|++.
T Consensus 419 ~~g-~d~~~G~G~vna~~Al~~ 439 (671)
T 1r6v_A 419 GNG-WDHDTGYGLVKLDAALQG 439 (671)
T ss_dssp SSS-CBTTTBTCBCCHHHHHHC
T ss_pred CCC-CCCCCCCCEECHHHHHHH
T ss_conf 888-777855435189998202
No 8
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=1.00 E-value=1 Score=378.93 Aligned_cols=274 Identities=23% Similarity=0.268 Sum_probs=211.7
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 98199999499999999989858888777873334666433576643223213688732347899991989999986469
Q 000658 285 GEVWRVALDTQSLEDEPDHGKLADFAPLTNYKTERKHGVFSKLDACTFVANVYDEGNVLSIVTDSSPHGTHVAGIATAFN 364 (1368)
Q Consensus 285 GgV~VAVIDTGI~~~d~~~~dL~~~~~l~~y~~~~~~g~f~~~d~~~~~~n~~d~gn~~~~~~D~~gHGThVAGIIAg~~ 364 (1368)
.+|+||||||| +++.|++|.+........... ...|..+..+.........|..+|||||||||+|++
T Consensus 146 ~gv~VaViDtG---id~~Hp~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g 213 (471)
T 3t41_A 146 ANTKIAIIDTG---VMKNHDDLKNNFSTDSKNLVP---------LNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANG 213 (471)
T ss_dssp CCCCEEEEESC---CCTTCTTTTTTBCTTCEECCC---------TTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBS
T ss_pred CCCEEEEEECC---CCCCCHHHHCCCCCCCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCC
T ss_conf 98189999399---898995575376667753455---------787457773447887777677785005653000378
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC------------CCHHHHHHH
Q ss_conf 99998643127973999996049999767722599999999959992999686899999------------983799999
Q 000658 365 PEEPLLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEHKCDLINMSYGEPTLL------------PDYGRFIDL 432 (1368)
Q Consensus 365 ~n~~g~~GVAP~AkIi~vKV~d~~~gs~et~s~ii~Ai~~Ai~~gadVINmS~G~~~~~------------~~~~~~~~~ 432 (1368)
+ +.||||+|+|+++|+++...+ ...++++||+|+++++++|||||||..... ......+..
T Consensus 214 ~----~~GvAp~a~l~~~kv~~~~~~---~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (471)
T 3t41_A 214 K----LIGVAPNNKFTMYRVFGSKKT---ELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQK 286 (471)
T ss_dssp S----SBCSSTTSCEEEEECCSSSCC---CHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHH
T ss_pred C----EEEECCCCEEEEEEECCCCCC---CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 6----068889985999981268987---689999999999867998999689878777544566543222026799999
Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCC----------------CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999973994999943899999998----------------789999999849994332721014763112699999831
Q 000658 433 VNEAVNKHRLVFVSSAGNSGPALNT----------------VGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGLEY 496 (1368)
Q Consensus 433 a~e~a~~~GVIvV~AAGN~G~~~~t----------------vg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~~s 496 (1368)
+++.+.++|+++|+||||+|...+. +.+|+ ..+++|+|||++ ..+.++
T Consensus 287 ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa-~~~~vitVgA~~---------------~~~~~a 350 (471)
T 3t41_A 287 AINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPA-SMDNVVTVGSTD---------------QKSNLS 350 (471)
T ss_dssp HHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETT-TSTTEEEEEEEC---------------TTSSBC
T ss_pred HHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCC-CCCCEEEEEEEC---------------CCCCCC
T ss_conf 9999984997899974899867776433455666566775011665-579749999517---------------989888
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCEE--------------------ECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 0279998999997428994498122--------------------10366888112048997126888799999989866
Q 000658 497 TWSSRGPTADGDLGVCISAPGGAVA--------------------PVSTWTLQRRMLMNGTSMASPSACGGIALLISAMK 556 (1368)
Q Consensus 497 ~fSS~Gp~~DG~ikpDI~APG~~I~--------------------s~~~~~~~~~~~~sGTSmAAP~VAGaaALLlsa~k 556 (1368)
.||++||.. |||+|||+++. ..+.+..+.|..++|||||||+|||++|||+|+
T Consensus 351 ~fS~~G~~~-----~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~~~~~~sGTS~AaP~VAG~aAll~~~-- 423 (471)
T 3t41_A 351 EFSNFGMNY-----TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNGRYIYQAGTALATPKVSGALALIIDK-- 423 (471)
T ss_dssp TTCCBCTTT-----CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTSSEEEECSHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCCCCCC-----CEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHH--
T ss_conf 766899999-----8699558873333445654334555666750683279998785254688789999999999986--
Q ss_pred HCCC-CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 1799-99999999999823955898888988543340499899999995
Q 000658 557 ANAI-PVSPYTVRKAVENTSVPIGALAEDKLSTGHGLLQVDKAYEYVQQ 604 (1368)
Q Consensus 557 ~~~p-~ltp~~Ik~lL~~TA~~~~~~~~~~~~~G~GlIdv~kAv~~l~~ 604 (1368)
+| .++|.+||.+|++||.+... .++..+|||+||+.+|++.+.+
T Consensus 424 --~p~~~~~~~v~~~L~~tA~~~~~--~~~~~~G~G~vd~~~Al~~a~~ 468 (471)
T 3t41_A 424 --YHLEKHPDKAIELLYQHGTSKNN--KPFSRYGHGELDVYKALNVANQ 468 (471)
T ss_dssp --HTCTTCHHHHHHHHHHHSBCCSC--CCHHHHTTCBBCHHHHTTTTCC
T ss_pred --CCCCCCHHHHHHHHHHHCCCCCC--CCCCCCCCCHHCHHHHHHHHHH
T ss_conf --16789999999999984877778--9967655674379999998775
No 9
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=1.00 E-value=1 Score=378.59 Aligned_cols=267 Identities=24% Similarity=0.293 Sum_probs=216.7
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 98199999499999999989858888777873334666433576643223213688732347899991989999986469
Q 000658 285 GEVWRVALDTQSLEDEPDHGKLADFAPLTNYKTERKHGVFSKLDACTFVANVYDEGNVLSIVTDSSPHGTHVAGIATAFN 364 (1368)
Q Consensus 285 GgV~VAVIDTGI~~~d~~~~dL~~~~~l~~y~~~~~~g~f~~~d~~~~~~n~~d~gn~~~~~~D~~gHGThVAGIIAg~~ 364 (1368)
.+|+||||||| ++.+|++|.+... .+.+|..+... ......|..+|||||||||+|..
T Consensus 41 ~gv~VaViDtG---id~~Hp~l~~~~~----------------~~~~~~~~~~~---~~~~~~d~~gHGT~VAgiia~~~ 98 (327)
T 2x8j_A 41 AGQIIGVIDTG---CQVDHPDLAERII----------------GGVNLTTDYGG---DETNFSDNNGHGTHVAGTVAAAE 98 (327)
T ss_dssp TTCEEEEEESC---CCTTCTTTGGGEE----------------EEEECSSGGGG---CTTCCCCSSSHHHHHHHHHHCCC
T ss_pred CCCEEEEECCC---CCCCCHHHHHCCC----------------CCCCCCCCCCC---CCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 99789998578---7989954720646----------------77666678788---87889999894689999996667
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH------CCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9999864312797399999604999976772259999999995------9992999686899999983799999999997
Q 000658 365 PEEPLLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVE------HKCDLINMSYGEPTLLPDYGRFIDLVNEAVN 438 (1368)
Q Consensus 365 ~n~~g~~GVAP~AkIi~vKV~d~~~gs~et~s~ii~Ai~~Ai~------~gadVINmS~G~~~~~~~~~~~~~~a~e~a~ 438 (1368)
++.++.||||+|+|+++|+++..+.+ +...++++++|+++ ++++|||||||..... ..+..+++.+.
T Consensus 99 -~~~g~~GvAp~a~l~~~kv~~~~g~~--~~~~i~~ai~~a~~~~~~~~~~~~Vin~S~G~~~~~----~~~~~ai~~a~ 171 (327)
T 2x8j_A 99 -TGSGVVGVAPKADLFIIKALSGDGSG--EMGWIAKAIRYAVDWRGPKGEQMRIITMSLGGPTDS----EELHDAVKYAV 171 (327)
T ss_dssp -CSSBCCCSSTTCEEEEEECSCTTSEE--CHHHHHHHHHHHHHCCCTTSCCCSEEEECEEBSCCC----HHHHHHHHHHH
T ss_pred -CCCCCEEECCCCEEEEEEEECCCCCC--CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC----HHHHHHHHHHH
T ss_conf -89973755799989999848899985--899999999999850201368956999799868889----89999999999
Q ss_pred CCCCEEEEECCCCCCCC---CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 39949999438999999---987899999998499943327210147631126999998310279998999997428994
Q 000658 439 KHRLVFVSSAGNSGPAL---NTVGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVCISA 515 (1368)
Q Consensus 439 ~~GVIvV~AAGN~G~~~---~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~~s~fSS~Gp~~DG~ikpDI~A 515 (1368)
.+|+++|+||||+|... .++.+|+ ..+++|+|||++ ..+.++.||++|+. |||+|
T Consensus 172 ~~gi~vV~AAGN~g~~~~~~~~~~~Pa-~~~~vi~Vga~~---------------~~~~~~~fS~~G~~------~di~A 229 (327)
T 2x8j_A 172 SNNVSVVCAAGNEGDGREDTNEFAYPA-AYNEVIAVGAVD---------------FDLRLSDFTNTNEE------IDIVA 229 (327)
T ss_dssp HTTCEEEEECCCT---------TCBTT-TSTTSEEEEEEC---------------TTCCBSCC---CCC------CSEEE
T ss_pred HCCCEEEEECCCCCCCCCCCCCEECCC-CCCCEEEEEEEC---------------CCCCCCCCCCCCCC------CEEEC
T ss_conf 789769997377787777777600666-689979999977---------------99998876689998------62745
Q ss_pred CCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4981221036688811204899712688879999998986617-999999999999982395589888898854334049
Q 000658 516 PGGAVAPVSTWTLQRRMLMNGTSMASPSACGGIALLISAMKAN-AIPVSPYTVRKAVENTSVPIGALAEDKLSTGHGLLQ 594 (1368)
Q Consensus 516 PG~~I~s~~~~~~~~~~~~sGTSmAAP~VAGaaALLlsa~k~~-~p~ltp~~Ik~lL~~TA~~~~~~~~~~~~~G~GlId 594 (1368)
||.+|.+ .+..+.|..++|||||||+|||++|||+|.++.. +|.+++.+||++|++||++++. +...+|||++|
T Consensus 230 PG~~i~s--~~~~~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~---~~~~~G~G~vd 304 (327)
T 2x8j_A 230 PGVGIKS--TYLDSGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF---TAQAEGNGFLT 304 (327)
T ss_dssp ECSSEEE--ECSTTCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS---CHHHHTTCEEC
T ss_pred CCCCEEE--ECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC---CCCCEEEEEEC
T ss_conf 8676474--237998776067899899999999999985454048999999999999972824799---97864213878
Q ss_pred HHHHHHHHHHCCC
Q ss_conf 9899999995399
Q 000658 595 VDKAYEYVQQYGN 607 (1368)
Q Consensus 595 v~kAv~~l~~~~~ 607 (1368)
+.+|++.+.++..
T Consensus 305 ~~~A~~~~~~~~~ 317 (327)
T 2x8j_A 305 LDLVERITGQFTE 317 (327)
T ss_dssp TTHHHHHTTCCC-
T ss_pred HHHHHHHHHCCCC
T ss_conf 9999976650133
No 10
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=1.00 E-value=1 Score=376.78 Aligned_cols=271 Identities=23% Similarity=0.252 Sum_probs=218.3
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 98199999499999999989858888777873334666433576643223213688732347899991989999986469
Q 000658 285 GEVWRVALDTQSLEDEPDHGKLADFAPLTNYKTERKHGVFSKLDACTFVANVYDEGNVLSIVTDSSPHGTHVAGIATAFN 364 (1368)
Q Consensus 285 GgV~VAVIDTGI~~~d~~~~dL~~~~~l~~y~~~~~~g~f~~~d~~~~~~n~~d~gn~~~~~~D~~gHGThVAGIIAg~~ 364 (1368)
.+|+||||||| +|++|++|.+.... ..++. +... .....|.++|||||||||+|..
T Consensus 8 ~gV~VaViDtG---id~~Hpdl~g~~~~----------------~~~~~----~~~~-~~~d~~~~gHGT~VAGiiag~~ 63 (282)
T 3zxy_A 8 HNIRVAILDGP---VDIAHPCFQGADLT----------------VLPTL----APTA-ARSDGFMSAHGTHVASIIFGQP 63 (282)
T ss_dssp TTSEEEEEESC---CCTTSGGGTTCEEE----------------ECCCS----SCCC-CCTTCHHHHHHHHHHHHHHCCT
T ss_pred CCCEEEEECCC---CCCCCHHHCCCEEE----------------CCCCC----CCCC-CCCCCCCCCCCCCEEEHHHCCC
T ss_conf 99899997489---89999667788031----------------47677----8998-8889988885641201312468
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 99998643127973999996049999767722599999999959992999686899999983799999999997399499
Q 000658 365 PEEPLLNGIAPGAQLISCKIGDTRLGSMETGTGLTRAFIAAVEHKCDLINMSYGEPTLLPDYGRFIDLVNEAVNKHRLVF 444 (1368)
Q Consensus 365 ~n~~g~~GVAP~AkIi~vKV~d~~~gs~et~s~ii~Ai~~Ai~~gadVINmS~G~~~~~~~~~~~~~~a~e~a~~~GVIv 444 (1368)
++ ++.||||+|+|+++|++....+.. +...++++++|+++++++|||||||...........++.+++.+..+|+++
T Consensus 64 ~~--~~~GvAp~a~l~~~kv~~~~~~~~-~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gi~v 140 (282)
T 3zxy_A 64 ET--SVPGIAPQCRGLIVPIFSDDRRRI-TQLDLARGIERAVNAGAHIINISGGELTDFGEADGWLENAVSLCRQNNVLL 140 (282)
T ss_dssp TS--SSCCSSTTSEEEEEECSCSSSSCC-CHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEE
T ss_pred CC--EEEEECCCCCEEEEEEECCCCCCC-HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 73--363103532057667512334643-099999998776405970885467666656666689999999876327447
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECC
Q ss_conf 99438999999987899999998499943327210147631126999998310279998999997428994498122103
Q 000658 445 VSSAGNSGPALNTVGAPGGTSSSIIAVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVCISAPGGAVAPVS 524 (1368)
Q Consensus 445 V~AAGN~G~~~~tvg~Pa~~s~~VIsVGA~~s~~~~~~~~~v~~~~~~g~~s~fSS~Gp~~DG~ikpDI~APG~~I~s~~ 524 (1368)
|+||||+|.. ...+|+ ..+++|+|||++ ..+.++.||++|+. ..+|||+|||.+|. .
T Consensus 141 V~AaGN~g~~--~~~~Pa-~~~~vi~Vga~~---------------~~~~~~~~S~~~~~---~~~~di~ApG~~i~--s 197 (282)
T 3zxy_A 141 VAAAGNNGCD--CLHVPA-ALPAVLAVGAMD---------------DHGHPLDFSNWGST---YEQQGILAPGEDIL--G 197 (282)
T ss_dssp EEECCSSCSS--CEEETT-TSTTCEEEEEEC---------------TTSCBCSSSCCCHH---HHHHEEEEECSSEE--E
T ss_pred EEECCCCCCC--CCCCCC-CCCEEEEEEEEC---------------CCCCCCCCCCCCCC---CCCCCEECCCCCEE--E
T ss_conf 9824667886--556765-444358999974---------------89963234677887---56552302676523--4
Q ss_pred CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 668881120489971268887999999898661799999999999998239558988-8898854334049989999999
Q 000658 525 TWTLQRRMLMNGTSMASPSACGGIALLISAMKANAIPVSPYTVRKAVENTSVPIGAL-AEDKLSTGHGLLQVDKAYEYVQ 603 (1368)
Q Consensus 525 ~~~~~~~~~~sGTSmAAP~VAGaaALLlsa~k~~~p~ltp~~Ik~lL~~TA~~~~~~-~~~~~~~G~GlIdv~kAv~~l~ 603 (1368)
.+..+.|..++|||||||+|||++|||++++++.+|.++|.+||++|++||+++... +.....+|||+||+.+|++.++
T Consensus 198 ~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~~~~~~~~~G~G~ln~~~A~~~~~ 277 (282)
T 3zxy_A 198 AKPGGGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDDAPEQARRCLAGRLNVSGAFTLLK 277 (282)
T ss_dssp ECTTSCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-------CGGGTTCBCCHHHHHHHHH
T ss_pred ECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEECCCCCCCCCCCEEEEEECHHHHHHHHH
T ss_conf 53899525368984643678799999999747527999899999999941953788998766744552837999999875
Q ss_pred HC
Q ss_conf 53
Q 000658 604 QY 605 (1368)
Q Consensus 604 ~~ 605 (1368)
..
T Consensus 278 ~g 279 (282)
T 3zxy_A 278 GG 279 (282)
T ss_dssp HT
T ss_pred CC
T ss_conf 75
Done!