BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000669
(1362 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UNA|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nad Bound
pdb|3UNA|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nad Bound
pdb|3UNC|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase To
1.65a Resolution
pdb|3UNC|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase To
1.65a Resolution
pdb|3UNI|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nadh Bound
pdb|3UNI|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nadh Bound
Length = 1332
Score = 554 bits (1428), Expect = e-157, Method: Compositional matrix adjust.
Identities = 411/1349 (30%), Positives = 647/1349 (47%), Gaps = 145/1349 (10%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
KY D++ F+ ++CL +C+++ ++TT EG+G++K HP+ +R A H SQCGFC
Sbjct: 57 KYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFC 116
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPG+ MS+++ L N+PEP T E E A GNLCRCTGYRPI ++FA
Sbjct: 117 TPGIVMSMYTLL-----RNQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 164
Query: 167 ADVDIEDLGFNSFWGKGESKEVKPSRLPPCKRNGDIFT---------FP----QFRKKEN 213
+ N+ K+ L P N + F FP + +
Sbjct: 165 KNGGCCGGNGNNPNCCMNQKKDHTVTLSPSLFNPEEFMPLDPTQEPIFPPELLRLKDVPP 224
Query: 214 KSWMLLDVKGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYI 271
K + +W +++EL +L H + KLVVGNT +G + ++ + I
Sbjct: 225 KQLRFEGERVTWIQASTLKELLDLKAQHPE-----AKLVVGNTEIGIEMKFKNQLFPMII 279
Query: 272 DIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIAS 331
+IPEL+ + GI GA +S ++L E ++ + +VFR + E + A
Sbjct: 280 CPAWIPELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAG 339
Query: 332 TFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERP 387
+++ AS+GGN++ A SD+ + +A G K+ I+ +G + M F +
Sbjct: 340 KQVKSVASLGGNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKT 396
Query: 388 PLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPC 447
L +LLSIEIPY S D F ++ A R + + + P
Sbjct: 397 LLGPEEILLSIEIPY--------SREDEF--FSAFKQASR-REDDIAKVTCGMRVLFQP- 444
Query: 448 KNGDRIMVNNCQLAFGAFG--TKHAIRA--RRVEEFLTGKLLSFDV---LYEAIILLRDT 500
+ V L +G T A++ +++ +F KLL DV L E + L D
Sbjct: 445 ---GSMQVKELALCYGGMADRTISALKTTQKQLSKFWNEKLLQ-DVCAGLAEELSLSPDA 500
Query: 501 VVAEVGTPNPAYRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDSKVQQYYD- 559
+ +R +L + F F+F+ ++ L G D K K+ Y
Sbjct: 501 PGGMI-----EFRRTLTLSFFFKFYLTV-----------LKKLGKDSKDKCGKLDPTYTS 544
Query: 560 --LSDKNKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLY 617
L + P + ++V + VG P+ AA+QASGEAVY DDIP N L+
Sbjct: 545 ATLLFQKDPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELF 604
Query: 618 GAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELT 677
+ ST+ A+IKSI+ G + L+ DIP E +F E +FA +
Sbjct: 605 LRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIPGSNET----GLFNDETVFAKDTV 660
Query: 678 RGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPK 737
G + VVADT ++A RAA++ + YE +L P I+++E+A++ +S +
Sbjct: 661 TCVGHIIGAVVADTPEHAERAAHVVKVTYE--DL-PAIITIEDAIKNNSFYG---SELKI 714
Query: 738 QVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPD-EDNCMVVYSSTQCPENVH 796
+ GD+ KG EAD ++S E+ + Q +FY+ET +A+P E+ M ++ STQ
Sbjct: 715 EKGDLKKGFSEADN-VVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQ 773
Query: 797 ATISRCLGIPQHNVRVITRRLXXXXXXKFLNPCLIHYRDIAYRVFKSVATACALAAYKLC 856
+ +++ LG+P + + V +R+ K L V+ A ALAAYK
Sbjct: 774 SFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTL-------------VSVAVALAAYKTG 820
Query: 857 RPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDIS-PVMPM 915
PVR +DR DM++TGGRHP Y VGF G I AL+++ +AG D+S +M
Sbjct: 821 HPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMER 880
Query: 916 IMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDF 975
+ Y + ++C+TNL S +A R G QA FIAE + VA T + +
Sbjct: 881 ALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEE 940
Query: 976 VRSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKR 1035
VR N++ L F + G +++P WD+ SS + R + +FN+ N W+KR
Sbjct: 941 VRWKNMYKEGDLTHFNQRLEG----FSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKR 996
Query: 1036 GICRVPIVHEM-----FVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSS 1090
G+C +P + F+ + + + +DGS++V GG E+GQGL TK+ Q+A+ AL
Sbjct: 997 GLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKI 1056
Query: 1091 VQGGELGDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRGRL 1150
+ K+ + ++ T ++ +AV C +++RL +
Sbjct: 1057 P--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFK--- 1105
Query: 1151 LERMGSVNWETLIQQAHLQSVNLSASSLY-VPD---------STSIHYLNYGAA---VEV 1197
++ +WE + A+ V+LS + Y P+ + HY YG A VE+
Sbjct: 1106 -KKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEI 1164
Query: 1198 NLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGT 1257
+ LTG+ LR DI+ D G SLNPA+D+GQ+EGAFVQG+G F LEE + +G + + G
Sbjct: 1165 DCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGP 1224
Query: 1258 WTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQ 1317
TYKIP +IP +F V +L ++K + +SKA GEPPL L SV A + AIR AR Q
Sbjct: 1225 STYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQ 1284
Query: 1318 LLTWSDLDRSDITFNLEVPATMPVVKELC 1346
+ + F L+ PAT ++ C
Sbjct: 1285 HTN----NNTKELFRLDSPATPEKIRNAC 1309
>pdb|1FO4|A Chain A, Crystal Structure Of Xanthine Dehydrogenase Isolated From
Bovine Milk
pdb|1FO4|B Chain B, Crystal Structure Of Xanthine Dehydrogenase Isolated From
Bovine Milk
pdb|1V97|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase
Fyx-051 Bound Form
pdb|1V97|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase
Fyx-051 Bound Form
pdb|1VDV|A Chain A, Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
pdb|1VDV|B Chain B, Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
pdb|3BDJ|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
A Covalently Bound Oxipurinol Inhibitor
pdb|3BDJ|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
A Covalently Bound Oxipurinol Inhibitor
pdb|3AM9|A Chain A, Complex Of Bovine Xanthine Dehydrogenase And Trihydroxy
Fyx-051
pdb|3AM9|B Chain B, Complex Of Bovine Xanthine Dehydrogenase And Trihydroxy
Fyx-051
pdb|3AMZ|A Chain A, Bovine Xanthine Oxidoreductase Urate Bound Form
pdb|3AMZ|B Chain B, Bovine Xanthine Oxidoreductase Urate Bound Form
pdb|3AX7|A Chain A, Bovine Xanthine Oxidase, Protease Cleaved Form
pdb|3AX7|B Chain B, Bovine Xanthine Oxidase, Protease Cleaved Form
pdb|3AX9|A Chain A, Bovine Xanthone Oxidase, Protease Cleaved Form
pdb|3AX9|B Chain B, Bovine Xanthone Oxidase, Protease Cleaved Form
Length = 1332
Score = 554 bits (1428), Expect = e-157, Method: Compositional matrix adjust.
Identities = 411/1349 (30%), Positives = 647/1349 (47%), Gaps = 145/1349 (10%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
KY D++ F+ ++CL +C+++ ++TT EG+G++K HP+ +R A H SQCGFC
Sbjct: 57 KYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFC 116
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPG+ MS+++ L N+PEP T E E A GNLCRCTGYRPI ++FA
Sbjct: 117 TPGIVMSMYTLL-----RNQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 164
Query: 167 ADVDIEDLGFNSFWGKGESKEVKPSRLPPCKRNGDIFT---------FP----QFRKKEN 213
+ N+ K+ L P N + F FP + +
Sbjct: 165 KNGGCCGGNGNNPNCCMNQKKDHTVTLSPSLFNPEEFMPLDPTQEPIFPPELLRLKDVPP 224
Query: 214 KSWMLLDVKGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYI 271
K + +W +++EL +L H + KLVVGNT +G + ++ + I
Sbjct: 225 KQLRFEGERVTWIQASTLKELLDLKAQHPE-----AKLVVGNTEIGIEMKFKNQLFPMII 279
Query: 272 DIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIAS 331
+IPEL+ + GI GA +S ++L E ++ + +VFR + E + A
Sbjct: 280 CPAWIPELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAG 339
Query: 332 TFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERP 387
+++ AS+GGN++ A SD+ + +A G K+ I+ +G + M F +
Sbjct: 340 KQVKSVASLGGNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKT 396
Query: 388 PLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPC 447
L +LLSIEIPY S D F ++ A R + + + P
Sbjct: 397 LLGPEEILLSIEIPY--------SREDEF--FSAFKQASR-REDDIAKVTCGMRVLFQP- 444
Query: 448 KNGDRIMVNNCQLAFGAFG--TKHAIRA--RRVEEFLTGKLLSFDV---LYEAIILLRDT 500
+ V L +G T A++ +++ +F KLL DV L E + L D
Sbjct: 445 ---GSMQVKELALCYGGMADRTISALKTTQKQLSKFWNEKLLQ-DVCAGLAEELSLSPDA 500
Query: 501 VVAEVGTPNPAYRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDSKVQQYYD- 559
+ +R +L + F F+F+ ++ L G D K K+ Y
Sbjct: 501 PGGMI-----EFRRTLTLSFFFKFYLTV-----------LKKLGKDSKDKCGKLDPTYTS 544
Query: 560 --LSDKNKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLY 617
L + P + ++V + VG P+ AA+QASGEAVY DDIP N L+
Sbjct: 545 ATLLFQKHPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELF 604
Query: 618 GAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELT 677
+ ST+ A+IKSI+ G + L+ DIP E +F E +FA +
Sbjct: 605 LRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIPGSNET----GLFNDETVFAKDTV 660
Query: 678 RGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPK 737
G + VVADT ++A RAA++ + YE +L P I+++E+A++ +S +
Sbjct: 661 TCVGHIIGAVVADTPEHAERAAHVVKVTYE--DL-PAIITIEDAIKNNSFYG---SELKI 714
Query: 738 QVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPD-EDNCMVVYSSTQCPENVH 796
+ GD+ KG EAD ++S E+ + Q +FY+ET +A+P E+ M ++ STQ
Sbjct: 715 EKGDLKKGFSEADN-VVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQ 773
Query: 797 ATISRCLGIPQHNVRVITRRLXXXXXXKFLNPCLIHYRDIAYRVFKSVATACALAAYKLC 856
+ +++ LG+P + + V +R+ K L V+ A ALAAYK
Sbjct: 774 SFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTL-------------VSVAVALAAYKTG 820
Query: 857 RPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDIS-PVMPM 915
PVR +DR DM++TGGRHP Y VGF G I AL+++ +AG D+S +M
Sbjct: 821 HPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMER 880
Query: 916 IMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDF 975
+ Y + ++C+TNL S +A R G QA FIAE + VA T + +
Sbjct: 881 ALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEE 940
Query: 976 VRSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKR 1035
VR N++ L F + G +++P WD+ SS + R + +FN+ N W+KR
Sbjct: 941 VRWKNMYKEGDLTHFNQRLEG----FSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKR 996
Query: 1036 GICRVPIVHEM-----FVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSS 1090
G+C +P + F+ + + + +DGS++V GG E+GQGL TK+ Q+A+ AL
Sbjct: 997 GLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKI 1056
Query: 1091 VQGGELGDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRGRL 1150
+ K+ + ++ T ++ +AV C +++RL +
Sbjct: 1057 P--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFK--- 1105
Query: 1151 LERMGSVNWETLIQQAHLQSVNLSASSLY-VPD---------STSIHYLNYGAA---VEV 1197
++ +WE + A+ V+LS + Y P+ + HY YG A VE+
Sbjct: 1106 -KKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEI 1164
Query: 1198 NLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGT 1257
+ LTG+ LR DI+ D G SLNPA+D+GQ+EGAFVQG+G F LEE + +G + + G
Sbjct: 1165 DCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGP 1224
Query: 1258 WTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQ 1317
TYKIP +IP +F V +L ++K + +SKA GEPPL L SV A + AIR AR Q
Sbjct: 1225 STYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQ 1284
Query: 1318 LLTWSDLDRSDITFNLEVPATMPVVKELC 1346
+ + F L+ PAT ++ C
Sbjct: 1285 HTN----NNTKELFRLDSPATPEKIRNAC 1309
>pdb|1N5X|A Chain A, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei-
6720 Bound
pdb|1N5X|B Chain B, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei-
6720 Bound
Length = 1331
Score = 553 bits (1426), Expect = e-157, Method: Compositional matrix adjust.
Identities = 411/1349 (30%), Positives = 647/1349 (47%), Gaps = 145/1349 (10%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
KY D++ F+ ++CL +C+++ ++TT EG+G++K HP+ +R A H SQCGFC
Sbjct: 56 KYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFC 115
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPG+ MS+++ L N+PEP T E E A GNLCRCTGYRPI ++FA
Sbjct: 116 TPGIVMSMYTLL-----RNQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 163
Query: 167 ADVDIEDLGFNSFWGKGESKEVKPSRLPPCKRNGDIFT---------FP----QFRKKEN 213
+ N+ K+ L P N + F FP + +
Sbjct: 164 KNGGCCGGNGNNPNCCMNQKKDHTVTLSPSLFNPEEFMPLDPTQEPIFPPELLRLKDVPP 223
Query: 214 KSWMLLDVKGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYI 271
K + +W +++EL +L H + KLVVGNT +G + ++ + I
Sbjct: 224 KQLRFEGERVTWIQASTLKELLDLKAQHPE-----AKLVVGNTEIGIEMKFKNQLFPMII 278
Query: 272 DIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIAS 331
+IPEL+ + GI GA +S ++L E ++ + +VFR + E + A
Sbjct: 279 CPAWIPELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAG 338
Query: 332 TFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERP 387
+++ AS+GGN++ A SD+ + +A G K+ I+ +G + M F +
Sbjct: 339 KQVKSVASLGGNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKT 395
Query: 388 PLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPC 447
L +LLSIEIPY S D F ++ A R + + + P
Sbjct: 396 LLGPEEILLSIEIPY--------SREDEF--FSAFKQASR-REDDIAKVTCGMRVLFQP- 443
Query: 448 KNGDRIMVNNCQLAFGAFG--TKHAIRA--RRVEEFLTGKLLSFDV---LYEAIILLRDT 500
+ V L +G T A++ +++ +F KLL DV L E + L D
Sbjct: 444 ---GSMQVKELALCYGGMADRTISALKTTQKQLSKFWNEKLLQ-DVCAGLAEELSLSPDA 499
Query: 501 VVAEVGTPNPAYRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDSKVQQYYD- 559
+ +R +L + F F+F+ ++ L G D K K+ Y
Sbjct: 500 PGGMI-----EFRRTLTLSFFFKFYLTV-----------LKKLGKDSKDKCGKLDPTYTS 543
Query: 560 --LSDKNKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLY 617
L + P + ++V + VG P+ AA+QASGEAVY DDIP N L+
Sbjct: 544 ATLLFQKHPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELF 603
Query: 618 GAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELT 677
+ ST+ A+IKSI+ G + L+ DIP E +F E +FA +
Sbjct: 604 LRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIPGSNET----GLFNDETVFAKDTV 659
Query: 678 RGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPK 737
G + VVADT ++A RAA++ + YE +L P I+++E+A++ +S +
Sbjct: 660 TCVGHIIGAVVADTPEHAERAAHVVKVTYE--DL-PAIITIEDAIKNNSFYG---SELKI 713
Query: 738 QVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPD-EDNCMVVYSSTQCPENVH 796
+ GD+ KG EAD ++S E+ + Q +FY+ET +A+P E+ M ++ STQ
Sbjct: 714 EKGDLKKGFSEADN-VVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQ 772
Query: 797 ATISRCLGIPQHNVRVITRRLXXXXXXKFLNPCLIHYRDIAYRVFKSVATACALAAYKLC 856
+ +++ LG+P + + V +R+ K L V+ A ALAAYK
Sbjct: 773 SFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTL-------------VSVAVALAAYKTG 819
Query: 857 RPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDIS-PVMPM 915
PVR +DR DM++TGGRHP Y VGF G I AL+++ +AG D+S +M
Sbjct: 820 HPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMER 879
Query: 916 IMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDF 975
+ Y + ++C+TNL S +A R G QA FIAE + VA T + +
Sbjct: 880 ALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEE 939
Query: 976 VRSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKR 1035
VR N++ L F + G +++P WD+ SS + R + +FN+ N W+KR
Sbjct: 940 VRWKNMYKEGDLTHFNQRLEG----FSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKR 995
Query: 1036 GICRVPIVHEM-----FVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSS 1090
G+C +P + F+ + + + +DGS++V GG E+GQGL TK+ Q+A+ AL
Sbjct: 996 GLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKI 1055
Query: 1091 VQGGELGDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRGRL 1150
+ K+ + ++ T ++ +AV C +++RL +
Sbjct: 1056 P--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFK--- 1104
Query: 1151 LERMGSVNWETLIQQAHLQSVNLSASSLY-VPD---------STSIHYLNYGAA---VEV 1197
++ +WE + A+ V+LS + Y P+ + HY YG A VE+
Sbjct: 1105 -KKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEI 1163
Query: 1198 NLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGT 1257
+ LTG+ LR DI+ D G SLNPA+D+GQ+EGAFVQG+G F LEE + +G + + G
Sbjct: 1164 DCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGP 1223
Query: 1258 WTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQ 1317
TYKIP +IP +F V +L ++K + +SKA GEPPL L SV A + AIR AR Q
Sbjct: 1224 STYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQ 1283
Query: 1318 LLTWSDLDRSDITFNLEVPATMPVVKELC 1346
+ + F L+ PAT ++ C
Sbjct: 1284 HTN----NNTKELFRLDSPATPEKIRNAC 1308
>pdb|2E1Q|A Chain A, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|B Chain B, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|C Chain C, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|D Chain D, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
Length = 1333
Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust.
Identities = 409/1348 (30%), Positives = 652/1348 (48%), Gaps = 142/1348 (10%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
KY +++ F+ ++CL +CS++ ++TT EG+G++K HP+ +R A H SQCGFC
Sbjct: 57 KYDRLQNKIVHFSANACLAPICSLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFC 116
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPG+ MS+++ L N+PEP T E E A GNLCRCTGYRPI ++FA
Sbjct: 117 TPGIVMSMYTLL-----RNQPEP-------TMEEIENAFQGNLCRCTGYRPILQGFRTFA 164
Query: 167 ADVDIEDLGF---NSFWGKGESKEV-------KPSRLPPCKRNGDIFTFPQFRKKENKSW 216
D N + + V KP P + P+ + ++
Sbjct: 165 RDGGCCGGDGNNPNCCMNQKKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPR 224
Query: 217 MLLDVKG---SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYI 271
L +G +W +++EL +L H D KLVVGNT +G + ++ + +
Sbjct: 225 KQLRFEGERVTWIQASTLKELLDLKAQHPD-----AKLVVGNTEIGIEMKFKNMLFPMIV 279
Query: 272 DIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIAS 331
+IPEL+ + GI GA +S ++L + ++ + +VFR + E + A
Sbjct: 280 CPAWIPELNSVEHGPDGISFGAACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAG 339
Query: 332 TFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERP 387
+++ ASVGGN++ A SD+ + +A GAK+ ++ +G + M F +
Sbjct: 340 KQVKSVASVGGNIITASPI---SDLNPVFMASGAKLTLVSRGTRRTVQMDHTFFPGYRKT 396
Query: 388 PLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPC 447
L +LLSIEIPY SR F ++ A R + +A+V+
Sbjct: 397 LLSPEEILLSIEIPY---SREGE-------YFSAFKQASRREDD---------IAKVT-- 435
Query: 448 KNGDRIM-------VNNCQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDT 500
+G R++ V L +G + I A + + KL ++L + L +
Sbjct: 436 -SGMRVLFKPGTTEVQELALCYGGMANR-TISALKTTQRQLSKLWKEELLQDVCAGLAEE 493
Query: 501 VVAEVGTPNPA--YRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDSKVQQYY 558
+ P +R +L + F F+F+ ++ + + + CG K
Sbjct: 494 LHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKLGQENLEDKCG-------KLDPTFASA 546
Query: 559 DLSDKNKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYG 618
L + P + ++V + E VG P+ A +QASGEAVY DDIP N L
Sbjct: 547 TLLFQKDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRYENELSL 606
Query: 619 AFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTR 678
+ ST+ A+IKSI+ G + ++ D+P G NI + E +FA +
Sbjct: 607 RLVTSTRAHAKIKSIDTSEAKKVPGFVCFISADDVP--GSNI--TGICNDETVFAKDKVT 662
Query: 679 GAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQ 738
G + VVADT ++ RAA I YE P I+++E+A++ +S + P ++
Sbjct: 663 CVGHIIGAVVADTPEHTQRAAQGVKITYEEL---PAIITIEDAIKNNSFYG--PELKIEK 717
Query: 739 VGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPD-EDNCMVVYSSTQCPENVHA 797
GD+ KG EAD ++S EI + Q +FY+ET +AVP E M ++ STQ +
Sbjct: 718 -GDLKKGFSEADN-VVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQS 775
Query: 798 TISRCLGIPQHNVRVITRRLXXXXXXKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCR 857
+++ LG+P + + V +R+ K + V+TA ALAAYK R
Sbjct: 776 FVAKMLGVPANRIVVRVKRMGGGFGGKVTRSTV-------------VSTAVALAAYKTGR 822
Query: 858 PVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDIS-PVMPMI 916
PVR +DR DM++TGGRHP Y VGF G + AL+++ + G D+S +M
Sbjct: 823 PVRCMLDRDEDMLITGGRHPFLARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERA 882
Query: 917 MLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFV 976
+ Y + ++C+TNLPS +A R G Q IAE + VA T M + V
Sbjct: 883 LFHMDNCYKIPNIRGTGRLCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEV 942
Query: 977 RSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRG 1036
R NL+ L F + G +T+P W++ SS ++ R + +FN+ N W+KRG
Sbjct: 943 RRKNLYKEGDLTHFNQKLEG----FTLPRCWEECLASSQYHARKSEVDKFNKENCWKKRG 998
Query: 1037 ICRVPIVHEM-----FVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSV 1091
+C +P + F+ + + + +DGS+++ GG E+GQGL TK+ Q+A+ AL
Sbjct: 999 LCIIPTKFGISFTVPFLNQAGALLHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIP 1058
Query: 1092 QGGELGDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRGRLL 1151
K+ + ++ T ++ +AV C +++RL +
Sbjct: 1059 T--------SKIYISETSTNTVPNTSPTAASVSADLNGQAVYAACQTILKRLEPYK---- 1106
Query: 1152 ERMGSVNWETLIQQAHLQSVNLSASSLY-VPD---------STSIHYLNYGAA---VEVN 1198
++ S +WE + A++ +V+LSA+ Y P+ HY +YG A VE++
Sbjct: 1107 KKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNSGNPFHYFSYGVACSEVEID 1166
Query: 1199 LLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTW 1258
LTG+ LR DI+ D G SLNPA+D+GQ+EGAFVQG+G F LEE + +G + + G
Sbjct: 1167 CLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPS 1226
Query: 1259 TYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQL 1318
TYKIP +IP +F V +L ++K + +SKA GEPPL LA S+ A + AIR AR Q
Sbjct: 1227 TYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAVGEPPLFLAASIFFAIKDAIRAARAQ- 1285
Query: 1319 LTWSDLDRSDITFNLEVPATMPVVKELC 1346
T +++ F L+ PAT ++ C
Sbjct: 1286 HTGNNVKE---LFRLDSPATPEKIRNAC 1310
>pdb|2CKJ|A Chain A, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|B Chain B, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|C Chain C, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|D Chain D, Human Milk Xanthine Oxidoreductase
Length = 1333
Score = 551 bits (1419), Expect = e-156, Method: Compositional matrix adjust.
Identities = 409/1348 (30%), Positives = 652/1348 (48%), Gaps = 142/1348 (10%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
KY +++ F+ ++CL +CS++ ++TT EG+G++K HP+ +R A H SQCGFC
Sbjct: 57 KYDRLQNKIVHFSANACLAPICSLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFC 116
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPG+ MS+++ L N+PEP T E E A GNLCRCTGYRPI ++FA
Sbjct: 117 TPGIVMSMYTLL-----RNQPEP-------TMEEIENAFQGNLCRCTGYRPILQGFRTFA 164
Query: 167 ADVDIEDLGF---NSFWGKGESKEV-------KPSRLPPCKRNGDIFTFPQFRKKENKSW 216
D N + + V KP P + P+ + ++
Sbjct: 165 RDGGCCGGDGNNPNCCMNQKKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPR 224
Query: 217 MLLDVKG---SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYI 271
L +G +W +++EL +L H D KLVVGNT +G + ++ + +
Sbjct: 225 KQLRFEGERVTWIQASTLKELLDLKAQHPD-----AKLVVGNTEIGIEMKFKNMLFPMIV 279
Query: 272 DIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIAS 331
+IPEL+ + GI GA +S ++L + ++ + +VFR + E + A
Sbjct: 280 CPAWIPELNSVEHGPDGISFGAACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAG 339
Query: 332 TFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERP 387
+++ ASVGGN++ A SD+ + +A GAK+ ++ +G + M F +
Sbjct: 340 KQVKSVASVGGNIITASPI---SDLNPVFMASGAKLTLVSRGTRRTVQMDHTFFPGYRKT 396
Query: 388 PLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPC 447
L +LLSIEIPY SR F ++ A R + +A+V+
Sbjct: 397 LLSPEEILLSIEIPY---SREGE-------YFSAFKQASRREDD---------IAKVT-- 435
Query: 448 KNGDRIM-------VNNCQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDT 500
+G R++ V L +G + I A + + KL ++L + L +
Sbjct: 436 -SGMRVLFKPGTTEVQELALCYGGMANR-TISALKTTQRQLSKLWKEELLQDVCAGLAEE 493
Query: 501 VVAEVGTPNPA--YRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDSKVQQYY 558
+ P +R +L + F F+F+ ++ + + + CG K
Sbjct: 494 LHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKLGQENLEDKCG-------KLDPTFASA 546
Query: 559 DLSDKNKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYG 618
L + P + ++V + E VG P+ A +QASGEAVY DDIP N L
Sbjct: 547 TLLFQKDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRYENELSL 606
Query: 619 AFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTR 678
+ ST+ A+IKSI+ G + ++ D+P G NI + E +FA +
Sbjct: 607 RLVTSTRAHAKIKSIDTSEAKKVPGFVCFISADDVP--GSNI--TGICNDETVFAKDKVT 662
Query: 679 GAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQ 738
G + VVADT ++ RAA I YE P I+++E+A++ +S + P ++
Sbjct: 663 CVGHIIGAVVADTPEHTQRAAQGVKITYEEL---PAIITIEDAIKNNSFYG--PELKIEK 717
Query: 739 VGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPD-EDNCMVVYSSTQCPENVHA 797
GD+ KG EAD ++S EI + Q +FY+ET +AVP E M ++ STQ +
Sbjct: 718 -GDLKKGFSEADN-VVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQS 775
Query: 798 TISRCLGIPQHNVRVITRRLXXXXXXKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCR 857
+++ LG+P + + V +R+ K + V+TA ALAAYK R
Sbjct: 776 FVAKMLGVPANRIVVRVKRMGGGFGGKETRSTV-------------VSTAVALAAYKTGR 822
Query: 858 PVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDIS-PVMPMI 916
PVR +DR DM++TGGRHP Y VGF G + AL+++ + G D+S +M
Sbjct: 823 PVRCMLDRDEDMLITGGRHPFLARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERA 882
Query: 917 MLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFV 976
+ Y + ++C+TNLPS +A R G Q IAE + VA T M + V
Sbjct: 883 LFHMDNCYKIPNIRGTGRLCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEV 942
Query: 977 RSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRG 1036
R NL+ L F + G +T+P W++ SS ++ R + +FN+ N W+KRG
Sbjct: 943 RRKNLYKEGDLTHFNQKLEG----FTLPRCWEECLASSQYHARKSEVDKFNKENCWKKRG 998
Query: 1037 ICRVPIVHEM-----FVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSV 1091
+C +P + F+ + + + +DGS+++ GG E+GQGL TK+ Q+A+ AL
Sbjct: 999 LCIIPTKFGISFTVPFLNQAGALLHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIP 1058
Query: 1092 QGGELGDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRGRLL 1151
K+ + ++ T ++ +AV C +++RL +
Sbjct: 1059 T--------SKIYISETSTNTVPNTSPTAASVSADLNGQAVYAACQTILKRLEPYK---- 1106
Query: 1152 ERMGSVNWETLIQQAHLQSVNLSASSLY-VPD---------STSIHYLNYGAA---VEVN 1198
++ S +WE + A++ +V+LSA+ Y P+ HY +YG A VE++
Sbjct: 1107 KKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNSGNPFHYFSYGVACSEVEID 1166
Query: 1199 LLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTW 1258
LTG+ LR DI+ D G SLNPA+D+GQ+EGAFVQG+G F LEE + +G + + G
Sbjct: 1167 CLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPS 1226
Query: 1259 TYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQL 1318
TYKIP +IP +F V +L ++K + +SKA GEPPL LA S+ A + AIR AR Q
Sbjct: 1227 TYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAVGEPPLFLAASIFFAIKDAIRAARAQ- 1285
Query: 1319 LTWSDLDRSDITFNLEVPATMPVVKELC 1346
T +++ F L+ PAT ++ C
Sbjct: 1286 HTGNNVKE---LFRLDSPATPEKIRNAC 1310
>pdb|2E3T|A Chain A, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant
(W335a And F336l)
pdb|2E3T|B Chain B, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant
(W335a And F336l)
Length = 1331
Score = 550 bits (1418), Expect = e-156, Method: Compositional matrix adjust.
Identities = 403/1343 (30%), Positives = 639/1343 (47%), Gaps = 134/1343 (9%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
KY +++ F++++CL +CS++ ++TT EG+GN++ HP+ +R A H SQCGFC
Sbjct: 57 KYDRLQNKIVHFSVNACLAPICSLHHVAVTTVEGIGNTQK-LHPVQERIARSHGSQCGFC 115
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPG+ MS+++ L N+PEP T E E A GNLCRCTGYRPI ++FA
Sbjct: 116 TPGIVMSMYTLL-----RNQPEP-------TVEEIENAFQGNLCRCTGYRPILQGFRTFA 163
Query: 167 ADVDIEDLGF---NSFWGKGESKEV-------KPSRLPPCKRNGDIFTFPQFRKKENKSW 216
D N + + + V P P + P+ + ++
Sbjct: 164 KDGGCCGGSGNNPNCCMNQTKDQTVSLSPSLFNPEDFKPLDPTQEPIFPPELLRLKDTPQ 223
Query: 217 MLLDVKG---SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYI 271
L +G +W +++EL +L H D KLVVGNT +G + ++ + +
Sbjct: 224 KKLRFEGERVTWIQASTMEELLDLKAQHPD-----AKLVVGNTEIGIEMKFKNMLFPLIV 278
Query: 272 DIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIAS 331
+IPEL+ + GI GA+ +S L EE ++ + +VFR + E + +A
Sbjct: 279 CPAWIPELNSVVHGPEGISFGASCPLSLVESVLAEEIAKLPEQKTEVFRGVMEQLRALAG 338
Query: 332 TFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERP 387
+++ AS+GGN++ A SD+ + +A GAK+ ++ +G + M F +
Sbjct: 339 KQVKSVASIGGNIITASPI---SDLNPVFMASGAKLTLVSRGTRRTVRMDHTFFPGYRKT 395
Query: 388 PLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPC 447
L +LLSIEIPY F ++ A R + + + + P
Sbjct: 396 LLRPEEILLSIEIPYSKEGE----------FFSAFKQASR-REDDIAKVTSGMRVLFKP- 443
Query: 448 KNGDRIMVNNCQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVVAEVGT 507
I V L FG + I A + K + ++L L + +
Sbjct: 444 ---GTIEVQELSLCFGGMADR-TISALKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDA 499
Query: 508 PNPA--YRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDSKVQQYYDLSDKNK 565
P +R +L + F F+F+ ++ + +CG D L K+
Sbjct: 500 PGGMVEFRRTLTLSFFFKFYLTVLQKLGRADLEDMCGK------LDPTFASATLLFQKDP 553
Query: 566 VPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTK 625
P + ++V + E VG P+ A +QASGEAVY DDIP N L + ST+
Sbjct: 554 -PANVQLFQEVPKDQSEEDMVGRPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTSTR 612
Query: 626 PLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVA 685
A+I SI+ G + LT +D+P N +F E +FA + G +
Sbjct: 613 AHAKITSIDTSEAKKVPGFVCFLTAEDVP----NSNATGLFNDETVFAKDEVTCVGHIIG 668
Query: 686 FVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLF--EIFPHWYPKQVGDIT 743
VVADT ++A RAA I YE +L P I+++++A+ +S + EI + GD+
Sbjct: 669 AVVADTPEHAQRAARGVKITYE--DL-PAIITIQDAINNNSFYGSEI-----KIEKGDLK 720
Query: 744 KGMDEADQKILSAEIKLSSQYYFYMETQTALAVPD-EDNCMVVYSSTQCPENVHATISRC 802
KG EAD ++S E+ + Q +FY+ET +AVP E M ++ STQ + +++
Sbjct: 721 KGFSEADN-VVSGELYIGGQEHFYLETNCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKM 779
Query: 803 LGIPQHNVRVITRRLXXXXXXKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIY 862
LG+P + + V +R+ K + V+TA ALAA+K RPVR
Sbjct: 780 LGVPDNRIVVRVKRMGGGFGGKETRSTV-------------VSTALALAAHKTGRPVRCM 826
Query: 863 VDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDIS-PVMPMIMLGTL 921
+DR DM++TGGRHP Y VGF G + AL++ + G D+S +M +
Sbjct: 827 LDRDEDMLITGGRHPFLAKYKVGFMKTGTVVALEVAHFSNGGNTEDLSRSIMERALFHMD 886
Query: 922 KKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINL 981
Y + ++C+TNLPS +A R G Q IAE + VA T + + VR N+
Sbjct: 887 NAYKIPNIRGTGRICKTNLPSNTAFRGFGGPQGMLIAEYWMSEVAITCGLPAEEVRRKNM 946
Query: 982 HTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVP 1041
+ L F + G +T+P WD+ SS + R +++FNR N W+KRG+C +P
Sbjct: 947 YKEGDLTHFNQKLEG----FTLPRCWDECIASSQYLARKREVEKFNRENCWKKRGLCIIP 1002
Query: 1042 IVHEM-----FVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGEL 1096
+ F+ V + +DGS+++ GG E+GQGL TK+ Q+A+ AL
Sbjct: 1003 TKFGISFTLPFLNQGGALVHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPT---- 1058
Query: 1097 GDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRGRLLERMGS 1156
K+ + ++ T ++ + V C +++RL + ++ +
Sbjct: 1059 ----SKIHISETSTNTVPNTSPTAASASADLNGQGVYEACQTILKRLEPFK----KKKPT 1110
Query: 1157 VNWETLIQQAHLQSVNLSASSLY-VPD---------STSIHYLNYGAA---VEVNLLTGE 1203
WE + A+ +V+LSA+ Y P+ HY +YG A VE++ LTG+
Sbjct: 1111 GPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGD 1170
Query: 1204 TTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIP 1263
LR DI+ D G SLNPA+D+GQ+EGAFVQG+G F +EE + +G + + G TYKIP
Sbjct: 1171 HKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTMEELHYSPEGSLHTRGPSTYKIP 1230
Query: 1264 TIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSD 1323
+IP +F V +L +++ + +SKA GEPPL LA S+ A + AIR AR Q
Sbjct: 1231 AFGSIPIEFRVSLLRDCPNKRAIYASKAVGEPPLFLASSIFFAIKDAIRAARAQ-----H 1285
Query: 1324 LDRSDITFNLEVPATMPVVKELC 1346
D + F L+ PAT ++ C
Sbjct: 1286 GDNAKQLFQLDSPATPEKIRNAC 1308
>pdb|1WYG|A Chain A, Crystal Structure Of A Rat Xanthine Dehydrogenase Triple
Mutant (C535a, C992r And C1324s)
Length = 1331
Score = 550 bits (1416), Expect = e-156, Method: Compositional matrix adjust.
Identities = 403/1343 (30%), Positives = 641/1343 (47%), Gaps = 134/1343 (9%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
KY +++ F++++CL +CS++ ++TT EG+GN++ HP+ +R A H SQCGFC
Sbjct: 57 KYDRLQNKIVHFSVNACLAPICSLHHVAVTTVEGIGNTQK-LHPVQERIARSHGSQCGFC 115
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPG+ MS+++ L N+PEP T E E A GNLCRCTGYRPI ++FA
Sbjct: 116 TPGIVMSMYTLL-----RNQPEP-------TVEEIENAFQGNLCRCTGYRPILQGFRTFA 163
Query: 167 ADVDIEDLGF---NSFWGKGESKEV-------KPSRLPPCKRNGDIFTFPQFRKKENKSW 216
D N + + + V P P + P+ + ++
Sbjct: 164 KDGGCCGGSGNNPNCCMNQTKDQTVSLSPSLFNPEDFKPLDPTQEPIFPPELLRLKDTPQ 223
Query: 217 MLLDVKG---SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYI 271
L +G +W +++EL +L H D KLVVGNT +G + ++ + +
Sbjct: 224 KKLRFEGERVTWIQASTMEELLDLKAQHPD-----AKLVVGNTEIGIEMKFKNMLFPLIV 278
Query: 272 DIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIAS 331
+IPEL+ + GI GA+ +S L EE ++ + +VFR + E + A
Sbjct: 279 CPAWIPELNSVVHGPEGISFGASCPLSLVESVLAEEIAKLPEQKTEVFRGVMEQLRWFAG 338
Query: 332 TFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERP 387
+++ AS+GGN++ A SD+ + +A GAK+ ++ +G + M F +
Sbjct: 339 KQVKSVASIGGNIITASPI---SDLNPVFMASGAKLTLVSRGTRRTVRMDHTFFPGYRKT 395
Query: 388 PLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPC 447
L +LLSIEIPY F ++ A R + + + + P
Sbjct: 396 LLRPEEILLSIEIPYSKEGE----------FFSAFKQASR-REDDIAKVTSGMRVLFKP- 443
Query: 448 KNGDRIMVNNCQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVVAEVGT 507
I V L FG + I A + K + ++L L + +
Sbjct: 444 ---GTIEVQELSLCFGGMADR-TISALKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDA 499
Query: 508 PNP--AYRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDSKVQQYYDLSDKNK 565
P +R +L + F F+F+ ++ + ++ R+ L D + K L +
Sbjct: 500 PGGMVEFRRTLTLSFFFKFYLTVLQ---KLGRADL----EDMAGKLDPTFASATLLFQKD 552
Query: 566 VPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTK 625
P + ++V + E VG P+ A +QASGEAVY DDIP N L + ST+
Sbjct: 553 PPANVQLFQEVPKDQSEEDMVGRPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTSTR 612
Query: 626 PLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVA 685
A+I SI+ G + LT +D+P N +F E +FA + G +
Sbjct: 613 AHAKITSIDTSEAKKVPGFVCFLTAEDVP----NSNATGLFNDETVFAKDEVTCVGHIIG 668
Query: 686 FVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLF--EIFPHWYPKQVGDIT 743
VVADT ++A RAA I YE +L P I+++++A+ +S + EI + GD+
Sbjct: 669 AVVADTPEHAQRAARGVKITYE--DL-PAIITIQDAINNNSFYGSEI-----KIEKGDLK 720
Query: 744 KGMDEADQKILSAEIKLSSQYYFYMETQTALAVPD-EDNCMVVYSSTQCPENVHATISRC 802
KG EAD ++S E+ + Q +FY+ET +AVP E M ++ STQ + +++
Sbjct: 721 KGFSEADN-VVSGELYIGGQEHFYLETNCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKM 779
Query: 803 LGIPQHNVRVITRRLXXXXXXKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIY 862
LG+P + + V +R+ K + V+TA ALAA+K RPVR
Sbjct: 780 LGVPDNRIVVRVKRMGGGFGGKETRSTV-------------VSTALALAAHKTGRPVRCM 826
Query: 863 VDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDIS-PVMPMIMLGTL 921
+DR DM++TGGRHP Y VGF G + AL++ + G D+S +M +
Sbjct: 827 LDRDEDMLITGGRHPFLAKYKVGFMKTGTVVALEVAHFSNGGNTEDLSRSIMERALFHMD 886
Query: 922 KKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINL 981
Y + ++C+TNLPS +A R G Q IAE + VA T + + VR N+
Sbjct: 887 NAYKIPNIRGTGRICKTNLPSNTAFRGFGGPQGMLIAEYWMSEVAITCGLPAEEVRRKNM 946
Query: 982 HTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVP 1041
+ L F + G +T+P WD+ SS + R +++FNR N W+KRG+C +P
Sbjct: 947 YKEGDLTHFNQKLEG----FTLPRCWDECIASSQYLARKREVEKFNRENRWKKRGLCIIP 1002
Query: 1042 IVHEM-----FVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGEL 1096
+ F+ V + +DGS+++ GG E+GQGL TK+ Q+A+ AL
Sbjct: 1003 TKFGISFTLPFLNQGGALVHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPT---- 1058
Query: 1097 GDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRGRLLERMGS 1156
K+ + ++ T ++ + V C +++RL + ++ +
Sbjct: 1059 ----SKIHISETSTNTVPNTSPTAASASADLNGQGVYEACQTILKRLEPFK----KKKPT 1110
Query: 1157 VNWETLIQQAHLQSVNLSASSLY-VPD---------STSIHYLNYGAA---VEVNLLTGE 1203
WE + A+ +V+LSA+ Y P+ HY +YG A VE++ LTG+
Sbjct: 1111 GPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGD 1170
Query: 1204 TTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIP 1263
LR DI+ D G SLNPA+D+GQ+EGAFVQG+G F +EE + +G + + G TYKIP
Sbjct: 1171 HKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTMEELHYSPEGSLHTRGPSTYKIP 1230
Query: 1264 TIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSD 1323
+IP +F V +L +++ + +SKA GEPPL LA S+ A + AIR AR Q
Sbjct: 1231 AFGSIPIEFRVSLLRDCPNKRAIYASKAVGEPPLFLASSIFFAIKDAIRAARAQ-----H 1285
Query: 1324 LDRSDITFNLEVPATMPVVKELC 1346
D + F L+ PAT ++ C
Sbjct: 1286 GDNAKQLFQLDSPATPEKIRNAC 1308
>pdb|3AN1|A Chain A, Crystal Structure Of Rat D428a Mutant, Urate Bound Form
pdb|3AN1|B Chain B, Crystal Structure Of Rat D428a Mutant, Urate Bound Form
Length = 1331
Score = 549 bits (1415), Expect = e-156, Method: Compositional matrix adjust.
Identities = 404/1350 (29%), Positives = 641/1350 (47%), Gaps = 148/1350 (10%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
KY +++ F++++CL +CS++ ++TT EG+GN++ HP+ +R A H SQCGFC
Sbjct: 57 KYDRLQNKIVHFSVNACLAPICSLHHVAVTTVEGIGNTQK-LHPVQERIARSHGSQCGFC 115
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPG+ MS+++ L N+PEP T E E A GNLCRCTGYRPI ++FA
Sbjct: 116 TPGIVMSMYTLL-----RNQPEP-------TVEEIENAFQGNLCRCTGYRPILQGFRTFA 163
Query: 167 ADVDIEDLGF---NSFWGKGESKEV-------KPSRLPPCKRNGDIFTFPQFRKKENKSW 216
D N + + + V P P + P+ + ++
Sbjct: 164 KDGGCCGGSGNNPNCCMNQTKDQTVSLSPSLFNPEDFKPLDPTQEPIFPPELLRLKDTPQ 223
Query: 217 MLLDVKG---SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYI 271
L +G +W +++EL +L H D KLVVGNT +G + ++ + +
Sbjct: 224 KKLRFEGERVTWIQASTMEELLDLKAQHPD-----AKLVVGNTEIGIEMKFKNMLFPLIV 278
Query: 272 DIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIAS 331
+IPEL+ + GI GA+ +S L EE ++ + +VFR + E + A
Sbjct: 279 CPAWIPELNSVVHGPEGISFGASCPLSLVESVLAEEIAKLPEQKTEVFRGVMEQLRWFAG 338
Query: 332 TFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERP 387
+++ AS+GGN++ A SD+ + +A GAK+ ++ +G + M F +
Sbjct: 339 KQVKSVASIGGNIITASPI---SDLNPVFMASGAKLTLVSRGTRRTVRMDHTFFPGYRKT 395
Query: 388 PLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPC 447
L +LLSIEIPY F ++ A R A+++
Sbjct: 396 LLRPEEILLSIEIPYSKEGE----------FFSAFKQASRRE------------ADIAKV 433
Query: 448 KNGDRIM-------VNNCQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDT 500
+G R++ V L FG + I A + K + ++L L +
Sbjct: 434 TSGMRVLFKPGTIEVQELSLCFGGMADR-TISALKTTPKQLSKSWNEELLQSVCAGLAEE 492
Query: 501 VVAEVGTPNPA--YRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDSKVQQYY 558
+ P +R +L + F F+F+ ++ + +CG D
Sbjct: 493 LQLAPDAPGGMVEFRRTLTLSFFFKFYLTVLQKLGRADLEDMCGK------LDPTFASAT 546
Query: 559 DLSDKNKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYG 618
L K+ P + ++V + E VG P+ A +QASGEAVY DDIP N L
Sbjct: 547 LLFQKDP-PANVQLFQEVPKDQSEEDMVGRPLPHLAANMQASGEAVYCDDIPRYENELSL 605
Query: 619 AFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTR 678
+ ST+ A+I SI+ G + LT +D+P N +F E +FA +
Sbjct: 606 RLVTSTRAHAKITSIDTSEAKKVPGFVCFLTAEDVP----NSNATGLFNDETVFAKDEVT 661
Query: 679 GAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLF--EIFPHWYP 736
G + VVADT ++A RAA I YE +L P I+++++A+ +S + EI
Sbjct: 662 CVGHIIGAVVADTPEHAQRAARGVKITYE--DL-PAIITIQDAINNNSFYGSEI-----K 713
Query: 737 KQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPD-EDNCMVVYSSTQCPENV 795
+ GD+ KG EAD ++S E+ + Q +FY+ET +AVP E M ++ STQ
Sbjct: 714 IEKGDLKKGFSEADN-VVSGELYIGGQEHFYLETNCTIAVPKGEAGEMELFVSTQNTMKT 772
Query: 796 HATISRCLGIPQHNVRVITRRLXXXXXXKFLNPCLIHYRDIAYRVFKSVATACALAAYKL 855
+ +++ LG+P + + V +R+ K + V+TA ALAA+K
Sbjct: 773 QSFVAKMLGVPDNRIVVRVKRMGGGFGGKETRSTV-------------VSTALALAAHKT 819
Query: 856 CRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDIS-PVMP 914
RPVR +DR DM++TGGRHP Y VGF G + AL++ + G D+S +M
Sbjct: 820 GRPVRCMLDRDEDMLITGGRHPFLAKYKVGFMKTGTVVALEVAHFSNGGNTEDLSRSIME 879
Query: 915 MIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVD 974
+ Y + ++C+TNLPS +A R G Q IAE + VA T + +
Sbjct: 880 RALFHMDNAYKIPNIRGTGRICKTNLPSNTAFRGFGGPQGMLIAEYWMSEVAITCGLPAE 939
Query: 975 FVRSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQK 1034
VR N++ L F + G +T+P WD+ SS + R +++FNR N W+K
Sbjct: 940 EVRRKNMYKEGDLTHFNQKLEG----FTLPRCWDECIASSQYLARKREVEKFNRENCWKK 995
Query: 1035 RGICRVPIVHEM-----FVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALS 1089
RG+C +P + F+ V + +DGS+++ GG E+GQGL TK+ Q+A+ AL
Sbjct: 996 RGLCIIPTKFGISFTLPFLNQGGALVHVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALK 1055
Query: 1090 SVQGGELGDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRGR 1149
K+ + ++ T ++ + V C +++RL +
Sbjct: 1056 IPT--------SKIHISETSTNTVPNTSPTAASASADLNGQGVYEACQTILKRLEPFK-- 1105
Query: 1150 LLERMGSVNWETLIQQAHLQSVNLSASSLY-VPD---------STSIHYLNYGAA---VE 1196
++ + WE + A+ +V+LSA+ Y P+ HY +YG A VE
Sbjct: 1106 --KKKPTGPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNSGNPFHYFSYGVACSEVE 1163
Query: 1197 VNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEG 1256
++ LTG+ LR DI+ D G SLNPA+D+GQ+EGAFVQG+G F +EE + +G + + G
Sbjct: 1164 IDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTMEELHYSPEGSLHTRG 1223
Query: 1257 TWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARK 1316
TYKIP +IP +F V +L +++ + +SKA GEPPL LA S+ A + AIR AR
Sbjct: 1224 PSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAVGEPPLFLASSIFFAIKDAIRAARA 1283
Query: 1317 QLLTWSDLDRSDITFNLEVPATMPVVKELC 1346
Q D + F L+ PAT ++ C
Sbjct: 1284 Q-----HGDNAKQLFQLDSPATPEKIRNAC 1308
>pdb|3ZYV|A Chain A, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|B Chain B, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|C Chain C, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|D Chain D, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
Length = 1335
Score = 470 bits (1209), Expect = e-132, Method: Compositional matrix adjust.
Identities = 392/1366 (28%), Positives = 639/1366 (46%), Gaps = 181/1366 (13%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
+Y P ++ F+ ++CL +CS++G ++TT EG+G++K HP+ +R A H +QCGFC
Sbjct: 61 RYDPISKRISHFSATACLVPICSLHGAAVTTVEGIGSTKTRIHPVQERIAKGHGTQCGFC 120
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPGM MS+++ L N PEP + + + + GNLCRCTGYRPI ++ KSF
Sbjct: 121 TPGMVMSIYTLL-----RNHPEP-------STEQIMETLGGNLCRCTGYRPIVESAKSFC 168
Query: 167 ADVDI----------------EDLGFNSFWGK-GESKEVKPSRLPPCKRNGDIFTFPQFR 209
E NS K E KE +P L P + IF R
Sbjct: 169 PSSTCCQMNGEGKCCLDEEKNEPERKNSVCTKLYEKKEFQP--LDPTQEL--IFPPELMR 224
Query: 210 KKENKSWMLLDVKG---SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH 266
E +L +G +W P ++ +L L H S LV+GNT +G +
Sbjct: 225 MAEESQNTVLTFRGERTTWIAPGTLNDLLELKMKH-----PSAPLVIGNTYLGLHM---- 275
Query: 267 YDKYIDIRY--------IPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQV 318
K+ D+ Y I EL ++ + G+ +G +++++ L + + E Q+
Sbjct: 276 --KFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVKNVLSDVVSRLPKEKTQI 333
Query: 319 FRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKF 378
+ + + ++ +A IRN AS+GG+++ + SD+ IL +N+ + ++
Sbjct: 334 YCALLKQLKTLAGQQIRNVASLGGHII---SRLPTSDLNPILGIGNCILNVASTEGIQQI 390
Query: 379 ML-EEFLERPP---LDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALP 434
L + FL P L VL+S+ +P + +R APR NA
Sbjct: 391 PLNDHFLAGVPDAILKPEQVLISVFVP----------RSSKWEFVSAFRQAPRQ-QNAFA 439
Query: 435 HLNAAFLAEVSPCKNGDRIMVNNCQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAI 494
+NA D + + + +G G I A + L G+ ++L +A
Sbjct: 440 TVNAGMKVVFKE----DTNTITDLGILYGGIGAT-VISADKSCRQLIGRCWDEEMLDDAG 494
Query: 495 ILLRDTVVAEVGTPN--PAYRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDS 552
++ + V + P YR +LA+ FLF F+ + + LK
Sbjct: 495 KMICEEVSLLMAAPGGMEEYRKTLAISFLFMFYLDVLK-----------------QLKTR 537
Query: 553 KVQQYYDLSDKN---------KVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEA 603
+Y D+S K +P + S + V P+G PI A+GEA
Sbjct: 538 DPHKYPDISQKLLHILEDFPLTMPYGMQSFQDVDFQQPLQDPIGRPIMHQSGIKHATGEA 597
Query: 604 VYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCK 663
V+ DD+ L+ A + S+K A+I S++ GV+ ++T +D+P G+N G +
Sbjct: 598 VFCDDMSVLPGELFLAVVTSSKSHAKIISLDASEALASLGVVDVVTARDVP--GDN-GRE 654
Query: 664 SMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVE 723
E L+A + GQ V V AD+ +A +AA I Y+ ++EP I++V++A++
Sbjct: 655 E----ESLYAQDEVICVGQIVCAVAADSYAHAQQAAKKVKIVYQ--DIEPMIVTVQDALQ 708
Query: 724 QSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPD-EDNC 782
S I P +Q G++ + ADQ IL E+ L Q +FYMETQ+ VP ED
Sbjct: 709 YESF--IGPERKLEQ-GNVEEAFQCADQ-ILEGEVHLGGQEHFYMETQSVRVVPKGEDKE 764
Query: 783 MVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXXXXXXKFLNPCLIHYRDIAYRVFK 842
M +Y S+Q ++R LGIP++ + +R+ K P
Sbjct: 765 MDIYVSSQDAAFTQEMVARTLGIPKNRINCHVKRVGGAFGGKASKP-------------G 811
Query: 843 SVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILID 902
+A+ A+AA K RP+R ++R+ DM++TGGRHP+ Y +GF +NGKI A + + I+
Sbjct: 812 LLASVAAVAAQKTGRPIRFILERRDDMLITGGRHPLLGKYKIGFMNNGKIKAADIQLYIN 871
Query: 903 AGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAV 961
G PD S V+ +L Y L +VC+TNLPS +A R G Q +F+ E
Sbjct: 872 GGCTPDDSELVIEYALLKLENAYKIPNLRVRGRVCKTNLPSNTAFRGFGFPQGAFVTETC 931
Query: 962 IEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTE 1021
+ VA+ + + VR +N++ + + E + W+ +SS+ R +
Sbjct: 932 MSAVAAKCRLPPEKVRELNMYRTIDRTIHNQ----EFDPTNLLQCWEACVENSSYYNRKK 987
Query: 1022 MIKEFNRSNLWQKRGICRVPI-----VHEMFVKSSPGKVSILSDGSIVVEVGGIELGQGL 1076
+ EFN+ W+KRGI +P+ + F + V I +DGS++V GG+ELGQG+
Sbjct: 988 AVDEFNQQRFWKKRGIAIIPMKFSVGFPKTFYYQAAALVQIYTDGSVLVAHGGVELGQGI 1047
Query: 1077 WTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCC 1136
TK+ Q+A+ EL + + + + T+++ AV+ C
Sbjct: 1048 NTKMIQVAS--------RELKIPMSYIHLDEMSTVTVPNTVTTGASTGADVNGRAVQNAC 1099
Query: 1137 NVLVERLSALRGRLLERMGSVNWETLIQQAHLQSVNLSASSLYVPDSTSIH--------- 1187
+L++RL + +++ S WE +++A +QS++LSA+ + +
Sbjct: 1100 QILMKRLEPI----IKQNPSGTWEEWVKEAFVQSISLSATGYFRGYQADMDWEKGEGDIF 1155
Query: 1188 -YLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEE 1243
Y +GAA VE++ LTG +R DI+ D S+NPAVD+GQIEGAFVQG+G + LEE
Sbjct: 1156 PYFVFGAACSEVEIDCLTGAHKNIRTDIVMDGSFSINPAVDIGQIEGAFVQGLGLYTLEE 1215
Query: 1244 YPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVS- 1302
+ +G++ + G YKI ++ IP++F+V +L + K + SSK GE L S
Sbjct: 1216 LKYSPEGVLYTRGPHQYKIASVTDIPEEFHVSLLTPTPNPKAIYSSKGLGEAGTFLGCSV 1275
Query: 1303 --VHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKELC 1346
A AA RE R W+ + PAT V++ C
Sbjct: 1276 FFAIAAAVAAAREERGLSPIWA----------INSPATAEVIRMAC 1311
>pdb|3SR6|C Chain C, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|L Chain L, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 745
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 261/781 (33%), Positives = 401/781 (51%), Gaps = 64/781 (8%)
Query: 586 VGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVI 645
VG P+ AA+QASGEAVY DDIP N L+ + ST+ A+IKSI+ G +
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 646 ALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVIN 705
L+ DIP E +F E +FA + G + VVADT ++A RAA++ +
Sbjct: 63 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 118
Query: 706 YEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYY 765
YE +L P I+++E+A++ +S + + GD+ KG EAD ++S E+ + Q +
Sbjct: 119 YE--DL-PAIITIEDAIKNNSFYG---SELKIEKGDLKKGFSEADN-VVSGELYIGGQDH 171
Query: 766 FYMETQTALAVPD-EDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXXXXXXK 824
FY+ET +A+P E+ M ++ STQ + +++ LG+P + + V +R+ K
Sbjct: 172 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 231
Query: 825 FLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSV 884
L V+ A ALAAYK PVR +DR DM++TGGRHP Y V
Sbjct: 232 ETRSTL-------------VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKV 278
Query: 885 GFKSNGKITALQLNILIDAGMYPDIS-PVMPMIMLGTLKKYDWGALHFDIKVCRTNLPSR 943
GF G I AL+++ +AG D+S +M + Y + ++C+TNL S
Sbjct: 279 GFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSN 338
Query: 944 SAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEYTI 1003
+A R G QA FIAE + VA T + + VR N++ L F + G +++
Sbjct: 339 TAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSV 394
Query: 1004 PLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEM-----FVKSSPGKVSIL 1058
P WD+ SS + R + +FN+ N W+KRG+C +P + F+ + + +
Sbjct: 395 PRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVY 454
Query: 1059 SDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQXXX 1118
+DGS++V GG E+GQGL TK+ Q+A+ AL + K+ + ++ T ++
Sbjct: 455 TDGSVLVSHGGTEMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSP 506
Query: 1119 XXXXXXXXXXCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQAHLQSVNLSASSL 1178
+AV C +++RL + ++ +WE + A+ V+LS +
Sbjct: 507 TAASVSTDIYGQAVYEACQTILKRLEPFK----KKNPDGSWEDWVMAAYQDRVSLSTTGF 562
Query: 1179 Y-VPD---------STSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDL 1225
Y P+ + HY YG A VE++ LTG+ LR DI+ D G SLNPA+D+
Sbjct: 563 YRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDI 622
Query: 1226 GQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKR 1285
GQ+EGAFVQG+G F LEE + +G + + G TYKIP +IP +F V +L ++K
Sbjct: 623 GQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKA 682
Query: 1286 VLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKEL 1345
+ +SKA GEPPL L SV A + AIR AR Q + + F L+ PAT ++
Sbjct: 683 IYASKAVGEPPLFLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNA 738
Query: 1346 C 1346
C
Sbjct: 739 C 739
>pdb|3NRZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Hypoxanthine
pdb|3NRZ|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Hypoxanthine
pdb|3NVW|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Guanine
pdb|3NVW|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Guanine
pdb|3NVY|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Quercetin
pdb|3NVY|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Quercetin
Length = 756
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 261/781 (33%), Positives = 401/781 (51%), Gaps = 64/781 (8%)
Query: 586 VGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVI 645
VG P+ AA+QASGEAVY DDIP N L+ + ST+ A+IKSI+ G +
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 646 ALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVIN 705
L+ DIP E +F E +FA + G + VVADT ++A RAA++ +
Sbjct: 63 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 118
Query: 706 YEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYY 765
YE +L P I+++E+A++ +S + + GD+ KG EAD ++S E+ + Q +
Sbjct: 119 YE--DL-PAIITIEDAIKNNSFYG---SELKIEKGDLKKGFSEADN-VVSGELYIGGQDH 171
Query: 766 FYMETQTALAVPD-EDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXXXXXXK 824
FY+ET +A+P E+ M ++ STQ + +++ LG+P + + V +R+ K
Sbjct: 172 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 231
Query: 825 FLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSV 884
L V+ A ALAAYK PVR +DR DM++TGGRHP Y V
Sbjct: 232 ETRSTL-------------VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKV 278
Query: 885 GFKSNGKITALQLNILIDAGMYPDIS-PVMPMIMLGTLKKYDWGALHFDIKVCRTNLPSR 943
GF G I AL+++ +AG D+S +M + Y + ++C+TNL S
Sbjct: 279 GFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSN 338
Query: 944 SAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEYTI 1003
+A R G QA FIAE + VA T + + VR N++ L F + G +++
Sbjct: 339 TAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSV 394
Query: 1004 PLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEM-----FVKSSPGKVSIL 1058
P WD+ SS + R + +FN+ N W+KRG+C +P + F+ + + +
Sbjct: 395 PRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVY 454
Query: 1059 SDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQXXX 1118
+DGS++V GG E+GQGL TK+ Q+A+ AL + K+ + ++ T ++
Sbjct: 455 TDGSVLVSHGGTEMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSP 506
Query: 1119 XXXXXXXXXXCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQAHLQSVNLSASSL 1178
+AV C +++RL + ++ +WE + A+ V+LS +
Sbjct: 507 TAASVSTDIYGQAVYEACQTILKRLEPFK----KKNPDGSWEDWVMAAYQDRVSLSTTGF 562
Query: 1179 Y-VPD---------STSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDL 1225
Y P+ + HY YG A VE++ LTG+ LR DI+ D G SLNPA+D+
Sbjct: 563 YRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDI 622
Query: 1226 GQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKR 1285
GQ+EGAFVQG+G F LEE + +G + + G TYKIP +IP +F V +L ++K
Sbjct: 623 GQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKA 682
Query: 1286 VLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKEL 1345
+ +SKA GEPPL L SV A + AIR AR Q + + F L+ PAT ++
Sbjct: 683 IYASKAVGEPPLFLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNA 738
Query: 1346 C 1346
C
Sbjct: 739 C 739
>pdb|1FIQ|C Chain C, Crystal Structure Of Xanthine Oxidase From Bovine Milk
pdb|3B9J|C Chain C, Structure Of Xanthine Oxidase With 2-Hydroxy-6-Methylpurine
pdb|3B9J|K Chain K, Structure Of Xanthine Oxidase With 2-Hydroxy-6-Methylpurine
Length = 763
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 261/781 (33%), Positives = 401/781 (51%), Gaps = 64/781 (8%)
Query: 586 VGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVI 645
VG P+ AA+QASGEAVY DDIP N L+ + ST+ A+IKSI+ G +
Sbjct: 4 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 63
Query: 646 ALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVIN 705
L+ DIP E +F E +FA + G + VVADT ++A RAA++ +
Sbjct: 64 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 119
Query: 706 YEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYY 765
YE +L P I+++E+A++ +S + + GD+ KG EAD ++S E+ + Q +
Sbjct: 120 YE--DL-PAIITIEDAIKNNSFYG---SELKIEKGDLKKGFSEADN-VVSGELYIGGQDH 172
Query: 766 FYMETQTALAVPD-EDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXXXXXXK 824
FY+ET +A+P E+ M ++ STQ + +++ LG+P + + V +R+ K
Sbjct: 173 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 232
Query: 825 FLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSV 884
L V+ A ALAAYK PVR +DR DM++TGGRHP Y V
Sbjct: 233 ETRSTL-------------VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKV 279
Query: 885 GFKSNGKITALQLNILIDAGMYPDIS-PVMPMIMLGTLKKYDWGALHFDIKVCRTNLPSR 943
GF G I AL+++ +AG D+S +M + Y + ++C+TNL S
Sbjct: 280 GFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSN 339
Query: 944 SAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEYTI 1003
+A R G QA FIAE + VA T + + VR N++ L F + G +++
Sbjct: 340 TAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSV 395
Query: 1004 PLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEM-----FVKSSPGKVSIL 1058
P WD+ SS + R + +FN+ N W+KRG+C +P + F+ + + +
Sbjct: 396 PRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVY 455
Query: 1059 SDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQXXX 1118
+DGS++V GG E+GQGL TK+ Q+A+ AL + K+ + ++ T ++
Sbjct: 456 TDGSVLVSHGGTEMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSP 507
Query: 1119 XXXXXXXXXXCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQAHLQSVNLSASSL 1178
+AV C +++RL + ++ +WE + A+ V+LS +
Sbjct: 508 TAASVSTDIYGQAVYEACQTILKRLEPFK----KKNPDGSWEDWVMAAYQDRVSLSTTGF 563
Query: 1179 Y-VPD---------STSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDL 1225
Y P+ + HY YG A VE++ LTG+ LR DI+ D G SLNPA+D+
Sbjct: 564 YRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDI 623
Query: 1226 GQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKR 1285
GQ+EGAFVQG+G F LEE + +G + + G TYKIP +IP +F V +L ++K
Sbjct: 624 GQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKA 683
Query: 1286 VLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKEL 1345
+ +SKA GEPPL L SV A + AIR AR Q + + F L+ PAT ++
Sbjct: 684 IYASKAVGEPPLFLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNA 739
Query: 1346 C 1346
C
Sbjct: 740 C 740
>pdb|3EUB|C Chain C, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
pdb|3EUB|L Chain L, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
pdb|3EUB|U Chain U, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
pdb|3EUB|4 Chain 4, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine
Length = 762
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 261/781 (33%), Positives = 401/781 (51%), Gaps = 64/781 (8%)
Query: 586 VGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVI 645
VG P+ AA+QASGEAVY DDIP N L+ + ST+ A+IKSI+ G +
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 646 ALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVIN 705
L+ DIP E +F E +FA + G + VVADT ++A RAA++ +
Sbjct: 63 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 118
Query: 706 YEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYY 765
YE +L P I+++E+A++ +S + + GD+ KG EAD ++S E+ + Q +
Sbjct: 119 YE--DL-PAIITIEDAIKNNSFYG---SELKIEKGDLKKGFSEADN-VVSGELYIGGQDH 171
Query: 766 FYMETQTALAVPD-EDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXXXXXXK 824
FY+ET +A+P E+ M ++ STQ + +++ LG+P + + V +R+ K
Sbjct: 172 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 231
Query: 825 FLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSV 884
L V+ A ALAAYK PVR +DR DM++TGGRHP Y V
Sbjct: 232 ETRSTL-------------VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKV 278
Query: 885 GFKSNGKITALQLNILIDAGMYPDIS-PVMPMIMLGTLKKYDWGALHFDIKVCRTNLPSR 943
GF G I AL+++ +AG D+S +M + Y + ++C+TNL S
Sbjct: 279 GFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSN 338
Query: 944 SAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEYTI 1003
+A R G QA FIAE + VA T + + VR N++ L F + G +++
Sbjct: 339 TAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSV 394
Query: 1004 PLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEM-----FVKSSPGKVSIL 1058
P WD+ SS + R + +FN+ N W+KRG+C +P + F+ + + +
Sbjct: 395 PRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVY 454
Query: 1059 SDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQXXX 1118
+DGS++V GG E+GQGL TK+ Q+A+ AL + K+ + ++ T ++
Sbjct: 455 TDGSVLVSHGGTEMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSP 506
Query: 1119 XXXXXXXXXXCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQAHLQSVNLSASSL 1178
+AV C +++RL + ++ +WE + A+ V+LS +
Sbjct: 507 TAASVSTDIYGQAVYEACQTILKRLEPFK----KKNPDGSWEDWVMAAYQDRVSLSTTGF 562
Query: 1179 Y-VPD---------STSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDL 1225
Y P+ + HY YG A VE++ LTG+ LR DI+ D G SLNPA+D+
Sbjct: 563 YRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDI 622
Query: 1226 GQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKR 1285
GQ+EGAFVQG+G F LEE + +G + + G TYKIP +IP +F V +L ++K
Sbjct: 623 GQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKA 682
Query: 1286 VLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKEL 1345
+ +SKA GEPPL L SV A + AIR AR Q + + F L+ PAT ++
Sbjct: 683 IYASKAVGEPPLFLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNA 738
Query: 1346 C 1346
C
Sbjct: 739 C 739
>pdb|3ETR|C Chain C, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|N Chain N, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3NS1|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
6- Mercaptopurine
pdb|3NS1|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
6- Mercaptopurine
pdb|3NVV|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Arsenite
pdb|3NVV|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Arsenite
pdb|3NVZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Indole-3- Aldehyde
pdb|3NVZ|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex With
Indole-3- Aldehyde
Length = 755
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 261/781 (33%), Positives = 401/781 (51%), Gaps = 64/781 (8%)
Query: 586 VGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVI 645
VG P+ AA+QASGEAVY DDIP N L+ + ST+ A+IKSI+ G +
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 646 ALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVIN 705
L+ DIP E +F E +FA + G + VVADT ++A RAA++ +
Sbjct: 63 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 118
Query: 706 YEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYY 765
YE +L P I+++E+A++ +S + + GD+ KG EAD ++S E+ + Q +
Sbjct: 119 YE--DL-PAIITIEDAIKNNSFYG---SELKIEKGDLKKGFSEADN-VVSGELYIGGQDH 171
Query: 766 FYMETQTALAVPD-EDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXXXXXXK 824
FY+ET +A+P E+ M ++ STQ + +++ LG+P + + V +R+ K
Sbjct: 172 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 231
Query: 825 FLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSV 884
L V+ A ALAAYK PVR +DR DM++TGGRHP Y V
Sbjct: 232 ETRSTL-------------VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKV 278
Query: 885 GFKSNGKITALQLNILIDAGMYPDIS-PVMPMIMLGTLKKYDWGALHFDIKVCRTNLPSR 943
GF G I AL+++ +AG D+S +M + Y + ++C+TNL S
Sbjct: 279 GFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSN 338
Query: 944 SAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEYTI 1003
+A R G QA FIAE + VA T + + VR N++ L F + G +++
Sbjct: 339 TAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEG----FSV 394
Query: 1004 PLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEM-----FVKSSPGKVSIL 1058
P WD+ SS + R + +FN+ N W+KRG+C +P + F+ + + +
Sbjct: 395 PRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVY 454
Query: 1059 SDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQXXX 1118
+DGS++V GG E+GQGL TK+ Q+A+ AL + K+ + ++ T ++
Sbjct: 455 TDGSVLVSHGGTEMGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSP 506
Query: 1119 XXXXXXXXXXCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQAHLQSVNLSASSL 1178
+AV C +++RL + ++ +WE + A+ V+LS +
Sbjct: 507 TAASVSTDIYGQAVYEACQTILKRLEPFK----KKNPDGSWEDWVMAAYQDRVSLSTTGF 562
Query: 1179 Y-VPD---------STSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDL 1225
Y P+ + HY YG A VE++ LTG+ LR DI+ D G SLNPA+D+
Sbjct: 563 YRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDI 622
Query: 1226 GQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKR 1285
GQ+EGAFVQG+G F LEE + +G + + G TYKIP +IP +F V +L ++K
Sbjct: 623 GQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKA 682
Query: 1286 VLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKEL 1345
+ +SKA GEPPL L SV A + AIR AR Q + + F L+ PAT ++
Sbjct: 683 IYASKAVGEPPLFLGASVFFAIKDAIRAARAQHTN----NNTKELFRLDSPATPEKIRNA 738
Query: 1346 C 1346
C
Sbjct: 739 C 739
>pdb|2W55|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W55|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W55|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W55|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
Length = 777
Score = 281 bits (719), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 228/776 (29%), Positives = 350/776 (45%), Gaps = 91/776 (11%)
Query: 586 VGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVI 645
VG P+ A +G+A Y+DD+P P N L+ AF ST+ A I ++ + GVI
Sbjct: 3 VGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVI 62
Query: 646 ALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVIN 705
A+ T D+P + S PEP+ A GQ + V A + + A AA A I
Sbjct: 63 AVFTAADLPHDNDASPAPS---PEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARIT 119
Query: 706 YEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYY 765
Y P IL++++A+ S FE P + + GD+ + A + ++ Q +
Sbjct: 120 YAPR---PAILTLDQALAADSRFEGGPVIWAR--GDVETALAGA-AHLAEGCFEIGGQEH 173
Query: 766 FYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXXXXXXKF 825
FY+E Q ALA+P E +V++ S+Q P + ++ LG+ H+VRV RR+ K
Sbjct: 174 FYLEGQAALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGK- 231
Query: 826 LNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVG 885
+A ACA+AA RP ++ DR DM++TG RH +I Y +G
Sbjct: 232 ------------QSQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIG 279
Query: 886 FKSNGKITALQLNILIDAGMYPDIS-PVMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRS 944
++GK+ L G D+S PV ML Y AL + RTN S +
Sbjct: 280 ADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNT 339
Query: 945 AMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLH-------------------TRN 985
A R G Q + E IEH+A + + +R++N + T+
Sbjct: 340 AFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKK 399
Query: 986 SLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHE 1045
+ Y E A+ + + +L S++F R I +N +N RGI P+
Sbjct: 400 TQTTHYGQ---EVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFG 456
Query: 1046 M-----FVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLL 1100
+ + + V I +DGS+ + GG E+GQGL K+ Q+AA L +
Sbjct: 457 ISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLG----------I 506
Query: 1101 D--KVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSAL------------ 1146
D +VR+ +DT + AV+ C L RL+
Sbjct: 507 DPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDV 566
Query: 1147 ---RGRLLERMGSVNWETLIQQAHLQSVNLSASSLYVPDSTS----------IHYLNYGA 1193
G++ S + ++ A++ ++LSA+ Y S Y YGA
Sbjct: 567 IFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGA 626
Query: 1194 AVE---VNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDG 1250
A+ ++ LTGE ILR DI++D G SLNPA+D+GQIEGA+VQG G+ EE + G
Sbjct: 627 AITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCG 686
Query: 1251 LVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCA 1306
+++ TYKIP P+ FNV + + + ++ + SKA GEPP LL +S A
Sbjct: 687 RLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLA 742
>pdb|1JRO|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRO|D Chain D, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRO|F Chain F, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRO|H Chain H, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus
pdb|1JRP|B Chain B, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|D Chain D, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|F Chain F, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|H Chain H, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|2W3R|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3S|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W54|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|D Chain D, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|F Chain F, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|H Chain H, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter
Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
Length = 777
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 228/776 (29%), Positives = 350/776 (45%), Gaps = 91/776 (11%)
Query: 586 VGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVI 645
VG P+ A +G+A Y+DD+P P N L+ AF ST+ A I ++ + GVI
Sbjct: 3 VGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVI 62
Query: 646 ALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVIN 705
A+ T D+P + S PEP+ A GQ + V A + + A AA A I
Sbjct: 63 AVFTAADLPHDNDASPAPS---PEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARIT 119
Query: 706 YEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYY 765
Y P IL++++A+ S FE P + + GD+ + A + ++ Q +
Sbjct: 120 YAPR---PAILTLDQALAADSRFEGGPVIWAR--GDVETALAGA-AHLAEGCFEIGGQEH 173
Query: 766 FYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXXXXXXKF 825
FY+E Q ALA+P E +V++ S+Q P + ++ LG+ H+VRV RR+ K
Sbjct: 174 FYLEGQAALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGK- 231
Query: 826 LNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVG 885
+A ACA+AA RP ++ DR DM++TG RH +I Y +G
Sbjct: 232 ------------ESQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIG 279
Query: 886 FKSNGKITALQLNILIDAGMYPDIS-PVMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRS 944
++GK+ L G D+S PV ML Y AL + RTN S +
Sbjct: 280 ADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNT 339
Query: 945 AMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLH-------------------TRN 985
A R G Q + E IEH+A + + +R++N + T+
Sbjct: 340 AFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKK 399
Query: 986 SLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHE 1045
+ Y E A+ + + +L S++F R I +N +N RGI P+
Sbjct: 400 TQTTHYGQ---EVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFG 456
Query: 1046 M-----FVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLL 1100
+ + + V I +DGS+ + GG E+GQGL K+ Q+AA L +
Sbjct: 457 ISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLG----------I 506
Query: 1101 D--KVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSAL------------ 1146
D +VR+ +DT + AV+ C L RL+
Sbjct: 507 DPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDV 566
Query: 1147 ---RGRLLERMGSVNWETLIQQAHLQSVNLSASSLYVPDSTS----------IHYLNYGA 1193
G++ S + ++ A++ ++LSA+ Y S Y YGA
Sbjct: 567 IFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGA 626
Query: 1194 AVE---VNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDG 1250
A+ ++ LTGE ILR DI++D G SLNPA+D+GQIEGA+VQG G+ EE + G
Sbjct: 627 AITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCG 686
Query: 1251 LVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCA 1306
+++ TYKIP P+ FNV + + + ++ + SKA GEPP LL +S A
Sbjct: 687 RLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLA 742
>pdb|1FIQ|A Chain A, Crystal Structure Of Xanthine Oxidase From Bovine Milk
pdb|3B9J|A Chain A, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
pdb|3B9J|I Chain I, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
Length = 219
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 75/120 (62%), Gaps = 12/120 (10%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
KY D++ F+ ++CL +C+++ ++TT EG+G++K HP+ +R A H SQCGFC
Sbjct: 57 KYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFC 116
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPG+ MS+++ L N+PEP T E E A GNLCRCTGYRPI ++FA
Sbjct: 117 TPGIVMSMYTLL-----RNQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 164
>pdb|3EUB|A Chain A, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|J Chain J, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|S Chain S, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|2 Chain 2, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
Length = 165
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 75/120 (62%), Gaps = 12/120 (10%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
KY D++ F+ ++CL +C+++ ++TT EG+G++K HP+ +R A H SQCGFC
Sbjct: 57 KYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFC 116
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPG+ MS+++ L N+PEP T E E A GNLCRCTGYRPI ++FA
Sbjct: 117 TPGIVMSMYTLL-----RNQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 164
>pdb|3ETR|A Chain A, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|L Chain L, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3NRZ|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NRZ|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NS1|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NS1|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NVV|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVV|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVW|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVW|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVY|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVY|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVZ|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3NVZ|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3SR6|A Chain A, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|J Chain J, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 164
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 75/120 (62%), Gaps = 12/120 (10%)
Query: 47 KYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFC 106
KY D++ F+ ++CL +C+++ ++TT EG+G++K HP+ +R A H SQCGFC
Sbjct: 56 KYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFC 115
Query: 107 TPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166
TPG+ MS+++ L N+PEP T E E A GNLCRCTGYRPI ++FA
Sbjct: 116 TPGIVMSMYTLL-----RNQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 163
>pdb|3HRD|A Chain A, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|E Chain E, Crystal Structure Of Nicotinate Dehydrogenase
Length = 425
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 165/411 (40%), Gaps = 32/411 (7%)
Query: 579 LSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSN 638
+ ++Y +G K + + G A + D P + LY ST P ARI S++
Sbjct: 1 MGKDYQVLGKNKVKVDSLEKVMGTAKFAADYSFP-DMLYAGVFRSTVPHARIVSLDLSKA 59
Query: 639 SIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRA 698
GV A+L + IP G G + EP ++ R G A+A V A T A
Sbjct: 60 RAIDGVEAVLDYHAIP-GKNRFGI--IIKDEPCLVDDKVRRYGDAIAVVAAQTPDLVQEA 116
Query: 699 ANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEI 758
L I E E LE I ++E A+E+ S I QV + G + D +I
Sbjct: 117 --LDAITIEYEELEG-IFTMERALEEDSP-AIHGDTNIHQVKHLEYG--DVDAAFKQCDI 170
Query: 759 KLSSQY------YFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRV 812
+ Y + ++E ++ D + + V STQ P ++ L +P VR+
Sbjct: 171 VVEDTYSTHRLTHMFIEPDAGVSYYDNEGMLTVVVSTQNPHYDRGEVAGMLALPNSKVRI 230
Query: 813 ITRRLXXXXXXKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMT 872
I K D+ SV CAL Y +PV++ R+ ++
Sbjct: 231 IQATTGGGFGGKL---------DL------SVQCHCALLTYHTKKPVKMVRSREESTTVS 275
Query: 873 GGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHF 931
RHPM + G +G++ A+Q+ + D G Y P V+ + + Y +
Sbjct: 276 SKRHPMTMHCKTGATKDGRLQAVQVEMFGDTGAYASYGPAVITRATVHCMGPYVVPNVRV 335
Query: 932 DIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLH 982
D K TN P A R G QAS E + +A L M+ +R +N H
Sbjct: 336 DAKFVYTNNPMSGAFRGFGVPQASVCHEGQMNALAKALGMDPIDIRILNAH 386
>pdb|1RM6|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1RM6|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
Length = 769
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 168/739 (22%), Positives = 291/739 (39%), Gaps = 112/739 (15%)
Query: 598 QASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGG 657
+ +G+A Y DI +P + L G + S ARI +I+ + GVIA+ T + P
Sbjct: 23 KVTGKAKYTADIAAP-DALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETP--- 78
Query: 658 ENIGCKSMFGPEPLFANEL------TRGAGQAVAFVVADTQKNANRAANLAVINYEMENL 711
FG P+ NE R G VA V A + A +A L ++YE +
Sbjct: 79 ------VPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYE---V 129
Query: 712 EPPILSVEEAVEQSS--LFEIFPHWYPKQV----GDITKGMDEADQKILSAEIKLSSQYY 765
P ++ + A++ + L + P+ ++V GD+ EAD I + +
Sbjct: 130 LPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEADL-IREKTYTFAEVNH 188
Query: 766 FYMETQTALAVPDE-DNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXXXXXXK 824
+ME LA D + + + ++TQ P VH ++ CL + +RVI L +
Sbjct: 189 VHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGAR 248
Query: 825 FLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSV 884
+H+ IA L A K VR+ R+ I GR ++ +
Sbjct: 249 ---TEALHFEIIA-----------GLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKI 294
Query: 885 GFKSNGKITALQLNILIDAGMYPDISPVMPMIMLGTLKK--YDWGALHFDIKVCRTNLPS 942
G K +GKI AL L G Y ++ ++ G L Y A+ D TN P
Sbjct: 295 GLKKDGKIAALALEATQAGGAYAGYG-IITILYTGALMHGLYHIPAIKHDAWRVYTNTPP 353
Query: 943 RSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEYT 1002
AMR G V EA++ + L ++ +R IN+ + Y A Y
Sbjct: 354 CGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMY---AQRVMSYG 410
Query: 1003 IPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVKSSPG--------- 1053
+P +K+ +S + +R + L + RG+ + + H + S+P
Sbjct: 411 VPECLEKVKAASGWEER--------KGKLPKGRGLG-IALSHFVSGTSTPKHWTGEPHAT 461
Query: 1054 -KVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQS---- 1108
+ + DG I + G ++GQG T Q+AA L G L ++RV+ +
Sbjct: 462 VNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVL--------GVRLSRIRVISADSAL 513
Query: 1109 ---DTLSLIQXXXXXXXXXXXXXCEAVR-LCCNVLVERLSALRG--RLLERM----GS-- 1156
D S E ++ + ++L A +++ M GS
Sbjct: 514 TPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQD 573
Query: 1157 --VNWETLIQQAHLQSVNLSASSLY----------------VPDSTSIHYLNYGAAVEVN 1198
++++ +++ A + S ++ Y + + Y V+
Sbjct: 574 PGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVD 633
Query: 1199 LLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTW 1258
+TG+ T + + D G++LNP GQ +G G+G + EE +G +V
Sbjct: 634 EITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEET-VYDNGRMVHGNIL 692
Query: 1259 TYKIPTIDTIPKQFNVEIL 1277
Y++PTI P ++E++
Sbjct: 693 DYRVPTIVESP---DIEVI 708
>pdb|1ZXI|B Chain B, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
pdb|1ZXI|E Chain E, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
Length = 809
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 170/777 (21%), Positives = 294/777 (37%), Gaps = 118/777 (15%)
Query: 601 GEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEF-KSNSIPCGVIALLTFKDIPEGGEN 659
G+ YVDD+ P L+G F+ S+ ARIKSI+ K+ ++P GV A+LT D+ +
Sbjct: 36 GKGNYVDDVKLP-GMLFGDFVRSSHAHARIKSIDTSKAKALP-GVFAVLTAADLKPLNLH 93
Query: 660 IGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYE--------MENL 711
+ + A+E Q VAFVVA + A A L ++YE + +
Sbjct: 94 YMPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVLVDPFKAM 153
Query: 712 EPPILSVEEAVEQS-----SLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYYF 766
EP + E ++ + H + ++GD + D AE+ + +
Sbjct: 154 EPDAPLLREDIKDKMTGAHGARKHHNHIFRWEIGD----KEGTDATFAKAEVVSKDMFTY 209
Query: 767 Y------METQTALAVPDE-DNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXX 819
+ +ET +A D+ + ++ + Q P + +S G+P+H + VI +
Sbjct: 210 HRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDI-- 267
Query: 820 XXXXKFLNPCLIHYRDIAYRVFKSVATACA-LAAYKLCRPVRIYVDRKTDMIMTGGRHPM 878
F N +V CA +A+ L PV+ DR ++ T
Sbjct: 268 --GGGFGN-----------KVGAYSGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDY 314
Query: 879 KISYSVGFKSNGKITALQLNILIDAGMY---PDISPVMPMIMLGTLKKYDWGALHFDIKV 935
++ + +GKI A++ ++L D G + D S M YD H +
Sbjct: 315 HMTTELAATKDGKILAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDG 374
Query: 936 CRTNLPS-----RSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSL--- 987
TN S R + R +A + E IE +A L M+ S +L +N +
Sbjct: 375 VYTNKASGGVAYRCSFRV---TEAVYAIERAIETLAQRLEMD-----SADLRIKNFIQPE 426
Query: 988 NLFYESSAG-EHAEYTIPLMWDKLAVSSSFNQ-RTEMIKE---FNRSNLWQKRGICRVPI 1042
Y + G E+ PL K + ++Q R E + F R + GI +
Sbjct: 427 QFPYMAPLGWEYDSGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIG-ISF 485
Query: 1043 VHEMFVKSSPGK--------------VSILSDGSIVVEVGGIELGQGLWTKVKQMAAFAL 1088
E+ V + P K + I GS++ +G GQG T Q+ A
Sbjct: 486 FTEI-VGAGPSKNCDILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIA--- 541
Query: 1089 SSVQGGELGDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRG 1148
ELG D + + + +T + A + + + +
Sbjct: 542 -----TELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAA 596
Query: 1149 RLLE-RMGSVNWET-------------LIQQAHLQSVN---------LSASSLYVPDSTS 1185
+LE G + W+ +++ S N L A + Y P + +
Sbjct: 597 HMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPPNMT 656
Query: 1186 IHYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYP 1245
+ Y +++++ TG R + DCG +NP + GQ+ G + M +E
Sbjct: 657 YPFGAYFCIMDIDIDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIR 716
Query: 1246 TNSDGLVVSEGTWTYKIPTIDTIPK-QFNVEILNSGHHQKRVLSSKASGEPPLLLAV 1301
+ G V+ + +PT PK + + + S HH + +K GE P + V
Sbjct: 717 YDEQGNVLGASFMDFFLPTAVETPKWETDYTVTPSPHHP---IGAKGVGESPHVGGV 770
>pdb|1N5W|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N5W|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N60|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N60|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N61|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N61|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N62|B Chain B, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N62|E Chain E, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N63|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1N63|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
Length = 809
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 170/777 (21%), Positives = 294/777 (37%), Gaps = 118/777 (15%)
Query: 601 GEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEF-KSNSIPCGVIALLTFKDIPEGGEN 659
G+ YVDD+ P L+G F+ S+ ARIKSI+ K+ ++P GV A+LT D+ +
Sbjct: 36 GKGNYVDDVKLP-GMLFGDFVRSSHAHARIKSIDTSKAKALP-GVFAVLTAADLKPLNLH 93
Query: 660 IGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYE--------MENL 711
+ + A+E Q VAFVVA + A A L ++YE + +
Sbjct: 94 YMPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVLVDPFKAM 153
Query: 712 EPPILSVEEAVEQS-----SLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYYF 766
EP + E ++ + H + ++GD + D AE+ + +
Sbjct: 154 EPDAPLLREDIKDKMTGAHGARKHHNHIFRWEIGD----KEGTDATFAKAEVVSKDMFTY 209
Query: 767 Y------METQTALAVPDE-DNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXX 819
+ +ET +A D+ + ++ + Q P + +S G+P+H + VI +
Sbjct: 210 HRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDI-- 267
Query: 820 XXXXKFLNPCLIHYRDIAYRVFKSVATACA-LAAYKLCRPVRIYVDRKTDMIMTGGRHPM 878
F N +V CA +A+ L PV+ DR ++ T
Sbjct: 268 --GGGFGN-----------KVGAYSGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDY 314
Query: 879 KISYSVGFKSNGKITALQLNILIDAGMY---PDISPVMPMIMLGTLKKYDWGALHFDIKV 935
++ + +GKI A++ ++L D G + D S M YD H +
Sbjct: 315 HMTTELAATKDGKILAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDG 374
Query: 936 CRTNLPS-----RSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSL--- 987
TN S R + R +A + E IE +A L M+ S +L +N +
Sbjct: 375 VYTNKASGGVAYRCSFRV---TEAVYAIERAIETLAQRLEMD-----SADLRIKNFIQPE 426
Query: 988 NLFYESSAG-EHAEYTIPLMWDKLAVSSSFNQ-RTEMIKE---FNRSNLWQKRGICRVPI 1042
Y + G E+ PL K + ++Q R E + F R + GI +
Sbjct: 427 QFPYMAPLGWEYDSGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIG-ISF 485
Query: 1043 VHEMFVKSSPGK--------------VSILSDGSIVVEVGGIELGQGLWTKVKQMAAFAL 1088
E+ V + P K + I GS++ +G GQG T Q+ A
Sbjct: 486 FTEI-VGAGPSKNCDILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIA--- 541
Query: 1089 SSVQGGELGDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRG 1148
ELG D + + + +T + A + + + +
Sbjct: 542 -----TELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAA 596
Query: 1149 RLLE-RMGSVNWET-------------LIQQAHLQSVN---------LSASSLYVPDSTS 1185
+LE G + W+ +++ S N L A + Y P + +
Sbjct: 597 HMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPPNMT 656
Query: 1186 IHYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYP 1245
+ Y +++++ TG R + DCG +NP + GQ+ G + M +E
Sbjct: 657 YPFGAYFCIMDIDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIR 716
Query: 1246 TNSDGLVVSEGTWTYKIPTIDTIPK-QFNVEILNSGHHQKRVLSSKASGEPPLLLAV 1301
+ G V+ + +PT PK + + + S HH + +K GE P + V
Sbjct: 717 YDEQGNVLGASFMDFFLPTAVETPKWETDYTVTPSPHHP---IGAKGVGESPHVGGV 770
>pdb|2W3R|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3S|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W54|A Chain A, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|C Chain C, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|E Chain E, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|G Chain G, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W55|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
Length = 462
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 137/338 (40%), Gaps = 74/338 (21%)
Query: 53 DQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFCTPGMCM 112
D +++CL +L + G ++ T EG+ HP+ Q H SQCGFCTPG +
Sbjct: 53 DAAGSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIV 112
Query: 113 SLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFAADVDIE 172
S+ +A R + + +AGNLCRCTGY PI A ++ A + +
Sbjct: 113 SMAAA----------------HDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPPAD 156
Query: 173 DLGFNSFWGKGESKEVKPSRLPPCKRNGDIFTFPQF----RKKENKSWMLLDVKGSWHNP 228
W + ++ FT Q R + +++ P
Sbjct: 157 -------WLQADAA----------------FTLAQLSSGVRGQTAPAFL----------P 183
Query: 229 ISVQELQNLLESHEDNNQTSIKLVVGNTGMGYY--KEVEHYDKYIDIRYIPELSMIRRDE 286
+ L + +H + L+ G T + + K + + + + +L+ IR
Sbjct: 184 ETSDALADWYLAHPEAT-----LIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETP 238
Query: 287 TGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVM 346
G IGA VTI+ A+ + E +A + + AS +R A++GGN+
Sbjct: 239 DGYGIGAGVTIA-ALRAFAEGPHPA----------LAGLLRRFASEQVRQVATIGGNIAN 287
Query: 347 AQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFL 384
D L+A+GA + + +GQ+ + LE+F
Sbjct: 288 GSPI---GDGPPALIAMGASLTLRRGQERRRMPLEDFF 322
>pdb|1JRO|A Chain A, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|C Chain C, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|E Chain E, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|G Chain G, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRP|A Chain A, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|C Chain C, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|E Chain E, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|G Chain G, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
Length = 462
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 137/338 (40%), Gaps = 74/338 (21%)
Query: 53 DQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFCTPGMCM 112
D +++CL +L + G ++ T EG+ HP+ Q H SQCGFCTPG +
Sbjct: 53 DAAGSRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIV 112
Query: 113 SLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFAADVDIE 172
S+ +A R + + +AGNLCRCTGY PI A ++ A + +
Sbjct: 113 SMAAA----------------HDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPPAD 156
Query: 173 DLGFNSFWGKGESKEVKPSRLPPCKRNGDIFTFPQF----RKKENKSWMLLDVKGSWHNP 228
W + ++ FT Q R + +++ P
Sbjct: 157 -------WLQADAA----------------FTLAQLSSGVRGQTAPAFL----------P 183
Query: 229 ISVQELQNLLESHEDNNQTSIKLVVGNTGMGYY--KEVEHYDKYIDIRYIPELSMIRRDE 286
+ L + +H + L+ G T + + K + + + + +L+ IR
Sbjct: 184 ETSDALADWYLAHPEAT-----LIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETP 238
Query: 287 TGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVM 346
G IGA VTI+ A+ + E +A + + AS +R A++GGN+
Sbjct: 239 DGYGIGAGVTIA-ALRAFAEGPHPA----------LAGLLRRFASEQVRQVATIGGNIAN 287
Query: 347 AQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFL 384
D L+A+GA + + +GQ+ + LE+F
Sbjct: 288 GSPI---GDGPPALIAMGASLTLRRGQERRRMPLEDFF 322
>pdb|1FFU|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The
Molybdenum Cofactor
pdb|1FFU|E Chain E, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The
Molybdenum Cofactor
pdb|1FFV|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|E Chain E, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 803
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 170/791 (21%), Positives = 293/791 (37%), Gaps = 139/791 (17%)
Query: 601 GEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDI------- 653
G+ YVDDI P L+ + + RIK I + GV A+LT +D+
Sbjct: 33 GKGNYVDDIKMP-GMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLKPLKLHW 91
Query: 654 -PEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYE----- 707
P ++ + A+E Q VA V+AD + A A + Y+
Sbjct: 92 MPTLAGDVAA--------VLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEYDELPVV 143
Query: 708 ---MENLEP--PILSVEEAVEQSSLF---EIFPHWYPKQVGDITKGMDEADQKILSAEIK 759
++ L+P P+L + A + S E H + GD D +A +
Sbjct: 144 IDPIDALKPDAPVLREDLAGKTSGAHGPREHHNHIFTWGAGDKAA----TDAVFANAPVT 199
Query: 760 LSSQYYFY------METQTALAVPDE-DNCMVVYSSTQCPENVHATISRCLGIPQHNVRV 812
+S Y+ +ET +A D + Y ++Q P V +S GIP+ VR+
Sbjct: 200 VSQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTVVSMLSGIPESKVRI 259
Query: 813 ITRRLXXXXXXKF-LNPCLIHYRDIAYRVFKSVATACAL-AAYKLCRPVRIYVDRKTDMI 870
++ + K + P + CA+ A+ L RPV+ DR ++
Sbjct: 260 VSPDIGGGFGNKVGIYPGYV----------------CAIVASIVLGRPVKWVEDRVENIS 303
Query: 871 MTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMY---PDISPVMPMIMLGTLKKYDWG 927
T + + +GKI L++N++ D G + D + + YD
Sbjct: 304 TTAFARDYHMDGELAATPDGKILGLRVNVVADHGAFDACADPTKFPAGLFHICSGSYDIP 363
Query: 928 ALHFDIKVCRTNLPSRSAMRAPGEV---------QASFIAEAVIEHVASTLSMEVDFVRS 978
H +K TN +APG V +A ++ E +++ +A L+M+ +R+
Sbjct: 364 RAHCSVKGVYTN-------KAPGGVAYXXSFRVTEAVYLIERMVDVLAQKLNMDKAEIRA 416
Query: 979 INLHTRNSL----NLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQK 1034
N + +E +G++ + + D + + ++ + N L
Sbjct: 417 KNFIRKEQFPYTTQFGFEYDSGDY-HTALKKVLDAVDYPALRAEQAARRADPNSPTLM-- 473
Query: 1035 RGICRVPIVHEMFVKSSPGK--------------VSILSDGSIVVEVGGIELGQGLWTKV 1080
GI V V + P K + I GS + +G I GQG T
Sbjct: 474 -GIGLVTFTE--VVGAGPSKMCDILGVGMFDSCEIRIHPTGSAIARMGTITQGQGHQTTY 530
Query: 1081 KQMAAFALSSVQGGELGDLLDKVRVVQSDT------------LSLIQXXXXXXXXXXXXX 1128
Q+ A ELG + ++V + DT S
Sbjct: 531 AQIIAT--------ELGIPSEVIQVEEGDTSTAPYGLGTYGSRSTPVAGAAIALAARKIH 582
Query: 1129 CEAVRLCCNVL----------VERLSALRG--RLLERMGSVNWETLIQQAHLQSVNLSAS 1176
+A ++ ++L V+R ++G + M + W+ Q L A
Sbjct: 583 AKARKIAAHMLEVNENDLDWEVDRFK-VKGDDSKFKTMADIAWQAYHQPPAGLEPGLEAV 641
Query: 1177 SLYVPDSTSIHYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGI 1236
Y P + + + Y V+++ TGET + R + DCG +NP + GQI G +G
Sbjct: 642 HYYDPPNFTYPFGIYLCVVDIDRATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTEGY 701
Query: 1237 GFFMLEEYPTNSDGLVVSEGTWTYKIPT-IDTIPKQFNVEILNSGHH---QKRVLSSKAS 1292
M ++ P ++ G ++ Y +PT ++T + + + S HH K V S
Sbjct: 702 AVAMGQQMPFDAQGNLLGNTLMDYFLPTAVETPHWETDHTVTPSPHHPIGAKGVAESPHV 761
Query: 1293 GEPPLLLAVSV 1303
G P A V
Sbjct: 762 GSIPTFTAAVV 772
>pdb|1DGJ|A Chain A, Crystal Structure Of The Aldehyde Oxidoreductase From
Desulfovibrio Desulfuricans Atcc 27774
Length = 907
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 158/713 (22%), Positives = 272/713 (38%), Gaps = 64/713 (8%)
Query: 587 GGPITKSGAALQASGEAVYVDD--IPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGV 644
G I + A + +G A + D + P N L+ A + A IK I+ GV
Sbjct: 177 GSSIPRPSAVAKVTGLAEFGADAALRMPENTLHLALAQAKVSHALIKGIDTSEAEKMPGV 236
Query: 645 IALLTFKDIPEGGENIGC------KSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRA 698
+LT KD+ G K P+ + G A+A V AD++ NA A
Sbjct: 237 YKVLTHKDVKGKNRITGLITFPTNKGDGWERPILNDSKIFQYGDALAIVCADSEANARAA 296
Query: 699 ANLAVINYEMENLEPPILSVEEAVEQSSLFEIFP---HWYPKQVGDITKGMDEADQKILS 755
A + +++E L P +S EA+ ++ EI P + Y Q+ + KG D
Sbjct: 297 AEK--VKFDLE-LLPEYMSAPEAMAPDAI-EIHPGTPNVYYDQLEE--KGEDTVPFFNDP 350
Query: 756 AEIKLSSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITR 815
A + YY TQ +P E + Y + Q +H S+ + I H + +I
Sbjct: 351 ANVVAEGSYY----TQRQPHLPIEPDVGYGYINEQGQVVIH---SKSVAIHLHAL-MIAP 402
Query: 816 RLXXXXXXKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGR 875
L + Y+ ++ +A RP + + + TG R
Sbjct: 403 GLGLEFPKDLVLVQNTTGGTFGYKFSPTMEALVGVAVMATGRPCHLRYNYEQQQNYTGKR 462
Query: 876 HPMKISYSVGFKSNGKITALQLNILIDAGMYPDISPVMPMIMLGTLKKYDWGALHFDIKV 935
P + GKI A++ + +D G Y + ++ TL+ + + I
Sbjct: 463 SPFWTTMRYAADRQGKILAMETDWSVDHGPYSEFGDLL------TLRGAQYIGAGYGIAN 516
Query: 936 CR-------TNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLN 988
R TN +A R G ++ F +E +++ +A L M+ +R++N +
Sbjct: 517 IRGTGRTVATNHCWGAAFRGYGAPESEFPSEVLMDELAEKLGMDPFELRALNCYREGDT- 575
Query: 989 LFYESSAGEHAE-YTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMF 1047
+S+G+ E ++P M+DK+ + + + +KE RS KRG+ V+
Sbjct: 576 ----TSSGQIPEVMSLPEMFDKM--RPYYEESKKRVKE--RSTAEIKRGVGVALGVYGAG 627
Query: 1048 V---KSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVR 1104
+ +S V + DGS+ + + GQG A AL LG + +
Sbjct: 628 LDGPDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRP-----LGITPENIH 682
Query: 1105 VVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRGRLL---ERMGSVNWET 1161
+V +DT A+R+ C +L+E + G E
Sbjct: 683 LVMNDTSKTPNSGPAGGSRSQVVTGNAIRVACEMLIEGMRKPGGGFFTPAEMKAEGRPMR 742
Query: 1162 LIQQAHLQSVNLSASSLYVPDSTSIHYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNP 1221
+ + + A P + ++ L + V V + TG+ T+ + + D G+ N
Sbjct: 743 YDGKWTAPAKDCDAKGQGSPFACYMYGL-FLTEVAVEVATGKATVEKMVCVADIGKICNK 801
Query: 1222 AVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNV 1274
V GQI G QG+G + E+Y + L IP+I IP +
Sbjct: 802 LVVDGQIYGGLAQGVGLALSEDY----EDLKKHSTMGGAGIPSIKMIPDDIEI 850
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 60 ISSCLTLLCSV-NGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFCTPGMCMSLFSAL 118
+ +C+ + V S+TT EG+G HP+ + A+QCGFCTPG +S + L
Sbjct: 57 VRACIIKMSRVAENASVTTLEGIGAPDC-LHPLQHAWIQHGAAQCGFCTPGFIVSAKALL 115
Query: 119 VNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFAA----DVDIEDL 174
+R + F K N+CRCTGY+P+ DA AA + +E++
Sbjct: 116 DENVAPSREDVRDWFQKHH----------NICRCTGYKPLVDAVMDAAAILRGEKTVEEI 165
Query: 175 GF-----NSFWG 181
F WG
Sbjct: 166 SFKMPADGRIWG 177
>pdb|1SIJ|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A. Aor
Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
pdb|1VLB|A Chain A, Structure Refinement Of The Aldehyde Oxidoreductase From
Desulfovibrio Gigas At 1.28 A
pdb|3FAH|A Chain A, Glycerol Inhibited Form Of Aldehyde Oxidoreductase From
Desulfovibrio Gigas
pdb|3FC4|A Chain A, Ethylene Glycol Inhibited Form Of Aldehyde Oxidoreductase
From Desulfovibrio Gigas
pdb|3L4P|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A. Aor
Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
Length = 907
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 159/734 (21%), Positives = 274/734 (37%), Gaps = 82/734 (11%)
Query: 612 PTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGC------KSM 665
P L+ A + + A IK I+ GV +++T KD+ G K
Sbjct: 204 PAGTLHLAMVQAKVSHANIKGIDTSEALTMPGVHSVITHKDVKGKNRITGLITFPTNKGD 263
Query: 666 FGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILS--VEEAVE 723
P+ +E G +A V AD++ NA AA + ++E L P +S A +
Sbjct: 264 GWDRPILCDEKVFQYGDCIALVCADSEANARAAAEK--VKVDLEEL-PAYMSGPAAAAED 320
Query: 724 QSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCM 783
+ P+ Y +Q I KG D SA++ + +Y + +P E +
Sbjct: 321 AIEIHPGTPNVYFEQ--PIVKGEDTG-PIFASADVTVEGDFYVGRQPH----MPIEPDVA 373
Query: 784 VVYSSTQCPENVHATISRCLGIPQHNVRVITR-RLXXXXXXKFLNPCLIHYRDIAYRVFK 842
Y +H S+ +G+ H + L NP + Y+
Sbjct: 374 FAYMGDDGKCYIH---SKSIGVHLHLYMIAPGVGLEPDQLVLVANPMGGTF---GYKFSP 427
Query: 843 SVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILID 902
+ A+AA RPV + + + TG R P +++ K +G + A++ + L+D
Sbjct: 428 TSEALVAVAAMATGRPVHLRYNYQQQQQYTGKRSPWEMNVKFAAKKDGTLLAMESDWLVD 487
Query: 903 AGMYPDISPVMPMIMLGTLKKYDWGALHFDIKVCR-------TNLPSRSAMRAPGEVQAS 955
G Y + ++ TL+ + ++I R TN SA R G Q+
Sbjct: 488 HGPYSEFGDLL------TLRGAQFIGAGYNIPNIRGLGRTVATNHVWGSAFRGYGAPQSM 541
Query: 956 FIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAE-YTIPLMWDKLAVSS 1014
F +E +++ +A L M+ + L +N+ + G+ E +++P M D+L
Sbjct: 542 FASECLMDMLAEKLGMD-----PLELRYKNAYRPGDTNPTGQEPEVFSLPDMIDQL---- 592
Query: 1015 SFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFV---KSSPGKVSILSDGSIVVEVGGIE 1071
+ + K S K+G+ V+ + +S + +DG+I V +
Sbjct: 593 RPKYQAALEKAQKESTATHKKGVGISIGVYGSGLDGPDASEAWAELNADGTITVHTAWED 652
Query: 1072 LGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEA 1131
GQG A AL +G +K++ +T + A
Sbjct: 653 HGQGADIGCVGTAHEALRP-----MGVAPEKIKFTWPNTATTPNSGPSGGSRQQVMTGNA 707
Query: 1132 VRLCCNVLVERLSALRG--------RLLERMGSV--NWETLIQQAHLQSVNLSASSLYVP 1181
+R+ C L++ G + ++ + NW T H +V V
Sbjct: 708 IRVACENLLKACEKPGGGYYTYDELKAADKPTKITGNW-TASGATHCDAVTGLGKPFVV- 765
Query: 1182 DSTSIHYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFML 1241
Y + A V V++ TG+TT+ ++ D G N GQI G QGIG +
Sbjct: 766 ----YMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALS 821
Query: 1242 EEY-PTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLA 1300
E++ +V G P I IP + ++ +N + GE PL
Sbjct: 822 EDFEDIKKHATLVGAG-----FPFIKQIPDKLDIVYVNH-PRPDGPFGASGVGELPL--- 872
Query: 1301 VSVHCATRAAIREA 1314
S H A AI+ A
Sbjct: 873 TSPHAAIINAIKSA 886
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 60 ISSCLTLLCSV-NGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFCTPGMCMSLFSAL 118
+ +C+T + V +G ITT EG+G + HP+ + + +QCGFC+PG +S L
Sbjct: 57 VRACVTKMKRVADGAQITTIEGVGQPE-NLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLL 115
Query: 119 VNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFAADVD 170
+R + F K N CRCTGY+P+ DA AA ++
Sbjct: 116 DTNADPSREDVRDWFQKHR----------NACRCTGYKPLVDAVMDAAAVIN 157
>pdb|1T3Q|B Chain B, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|E Chain E, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 788
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 161/732 (21%), Positives = 268/732 (36%), Gaps = 101/732 (13%)
Query: 600 SGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGEN 659
+G Y+ D+ + L+ A + S ARI SI+ GV + D+ E +
Sbjct: 28 TGRGRYIADL-VLSGMLHVASLRSPFAHARIVSIDVADAQALPGVELVWCGADVAELSQG 86
Query: 660 I-------GCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLE 712
I G ++ +PL AN +TR G+ VA VVA ++ A AA L I E E L
Sbjct: 87 IVATMQVEGFQTTI--QPLLANGVTRFVGEIVAVVVASSRAIAEDAAQL--IQVEYEEL- 141
Query: 713 PPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYYFY----- 767
P + +E A+E + V ++ DE S+ + Q+
Sbjct: 142 PAVTGIEAALEGEA--RANDTLAGNVVSRTSRARDELAPIFASSAGVVRGQFSCGRVSAC 199
Query: 768 -METQTALAVPD-EDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLXXXXXXKF 825
MET+ A+A + ++++++TQ P V ++ IP+H + V + F
Sbjct: 200 PMETRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIEVRVPDVGG----GF 255
Query: 826 LNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVG 885
+H ++ L + L RPVR DR+ + + + +
Sbjct: 256 GQKAHLHPEELL----------VCLLSRALGRPVRWIEDRQENFLGATHAKQQRNEMGLA 305
Query: 886 FKSNGKITALQLNILIDAGMYPDI-------SPVMPMIMLGTLKKYDWGALHFDIKVCRT 938
F +G+ AL+ + D G Y ++ S V ++LG Y A+ + T
Sbjct: 306 FDGDGRFLALENRSITDGGAYNNLPWTQLVESHVGNAVILGV---YKVPAVSEESIAVAT 362
Query: 939 NLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEH 998
N A R G E +I+ A L + +R N+ F H
Sbjct: 363 NKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNVVMPEDFP-FTNRLGQTH 421
Query: 999 AE----YTIPLMWDKLAVSSSFNQRTEMIKEFNRS--------NLWQKRGICRVPIVHEM 1046
E TI L+ +++ +F QR + + N G + +
Sbjct: 422 REGTYLQTINLL-EEMVNPEAFRQRQAEARARGKYLGLGVSVFNEVTGTGTRTLSFLGTP 480
Query: 1047 FVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVV 1106
V I G + V GQG T + Q+AA V G D+ V+
Sbjct: 481 TTTHDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAA----DVLGVPASDV-----VI 531
Query: 1107 QSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQA 1166
Q+ + ++ +++ ER+ L G LLE + + + +I+
Sbjct: 532 QAGSTKNTYGFGAYASRGAVIGAGSIGRAASIVRERVKQLAGHLLE---AASEDIVIEDG 588
Query: 1167 --HLQSV---------------------------NLSASSLYVPDSTSIHYLNYGAAVEV 1197
H+ V L A++ Y P + + A VE+
Sbjct: 589 LVHVAGVPAKGMPFAEVVGAAYFADATHPPGFDATLEATATYDPSDLVLANGGHAAIVEI 648
Query: 1198 NLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGT 1257
+ T T + + DCG +NP + GQI G Q IG +LEE + G +V+
Sbjct: 649 DASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDFGQLVTTTL 708
Query: 1258 WTYKIPTIDTIP 1269
Y IPT +P
Sbjct: 709 MDYLIPTTLDVP 720
>pdb|1T3Q|A Chain A, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|D Chain D, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 168
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 60 ISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALV 119
+ SCLTL GCSI T EGL + + + F HA QCGFCT GM + S L
Sbjct: 65 MRSCLTLAVQAEGCSIETVEGLSQGEK-LNALQDSFRRHHALQCGFCTAGMLATARSIL- 122
Query: 120 NAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADA 161
P P +R E + ++GNLCRCTGY I DA
Sbjct: 123 ----AENPAP-------SRDEVREVMSGNLCRCTGYETIIDA 153
>pdb|1N5W|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N5W|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N60|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N60|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N61|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N61|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N62|A Chain A, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N62|D Chain D, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N63|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1N63|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1ZXI|A Chain A, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
pdb|1ZXI|D Chain D, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
Length = 166
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 55 VEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFCTPGMCMSL 114
++ ++ SC NG SITT EG+ + + F H QCG+CTPGM M
Sbjct: 54 LDGMSVKSCTMFAVQANGASITTIEGMAAPDGTLSALQEGFRMMHGLQCGYCTPGMIMRS 113
Query: 115 FSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFAADVD 170
L P P T +E I GNLCRCTGY+ I A + AA ++
Sbjct: 114 HRLL-----QENPSP-------TEAEIRFGIGGNLCRCTGYQNIVKAIQYAAAKIN 157
>pdb|3B9J|B Chain B, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
pdb|3B9J|J Chain J, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
Length = 350
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 14/185 (7%)
Query: 224 SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYIDIRYIPELSM 281
+W +++EL +L H + KLVVGNT +G + ++ + I +IPEL+
Sbjct: 16 TWIQASTLKELLDLKAQHPEA-----KLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNA 70
Query: 282 IRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVG 341
+ GI GA +S ++L E ++ + +VFR + E + A +++ AS+G
Sbjct: 71 VEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLG 130
Query: 342 GNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERPPLDCRSVLLS 397
GN++ A SD+ + +A G K+ I+ +G + M F + L +LLS
Sbjct: 131 GNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEILLS 187
Query: 398 IEIPY 402
IEIPY
Sbjct: 188 IEIPY 192
>pdb|1FIQ|B Chain B, Crystal Structure Of Xanthine Oxidase From Bovine Milk
Length = 350
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 14/185 (7%)
Query: 224 SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYIDIRYIPELSM 281
+W +++EL +L H + KLVVGNT +G + ++ + I +IPEL+
Sbjct: 16 TWIQASTLKELLDLKAQHPEA-----KLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNA 70
Query: 282 IRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVG 341
+ GI GA +S ++L E ++ + +VFR + E + A +++ AS+G
Sbjct: 71 VEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLG 130
Query: 342 GNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERPPLDCRSVLLS 397
GN++ A SD+ + +A G K+ I+ +G + M F + L +LLS
Sbjct: 131 GNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEILLS 187
Query: 398 IEIPY 402
IEIPY
Sbjct: 188 IEIPY 192
>pdb|3NVV|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVV|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVW|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVW|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVY|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVY|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
Length = 334
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 14/185 (7%)
Query: 224 SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYIDIRYIPELSM 281
+W +++EL +L H + KLVVGNT +G + ++ + I +IPEL+
Sbjct: 41 TWIQASTLKELLDLKAQHPEA-----KLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNA 95
Query: 282 IRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVG 341
+ GI GA +S ++L E ++ + +VFR + E + A +++ AS+G
Sbjct: 96 VEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLG 155
Query: 342 GNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERPPLDCRSVLLS 397
GN++ A SD+ + +A G K+ I+ +G + M F + L +LLS
Sbjct: 156 GNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEILLS 212
Query: 398 IEIPY 402
IEIPY
Sbjct: 213 IEIPY 217
>pdb|3ETR|B Chain B, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|M Chain M, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3EUB|B Chain B, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|K Chain K, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|T Chain T, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|3 Chain 3, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3NRZ|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NRZ|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NS1|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NS1|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NVZ|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3NVZ|K Chain K, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3SR6|B Chain B, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|K Chain K, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 305
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 14/185 (7%)
Query: 224 SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEH--YDKYIDIRYIPELSM 281
+W +++EL +L H + KLVVGNT +G + ++ + I +IPEL+
Sbjct: 12 TWIQASTLKELLDLKAQHPEA-----KLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNA 66
Query: 282 IRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVG 341
+ GI GA +S ++L E ++ + +VFR + E + A +++ AS+G
Sbjct: 67 VEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLG 126
Query: 342 GNLVMAQRKCFPSDIATILLAVGAKVNIM-KGQKCEKFMLEEFL---ERPPLDCRSVLLS 397
GN++ A SD+ + +A G K+ I+ +G + M F + L +LLS
Sbjct: 127 GNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEILLS 183
Query: 398 IEIPY 402
IEIPY
Sbjct: 184 IEIPY 188
>pdb|1FFU|A Chain A, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFU|D Chain D, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFV|A Chain A, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|D Chain D, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 163
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 55 VEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFCTPGMCMSL 114
++ ++ SC L +G + T EGL N K H + + F H QCGFCTPGM M
Sbjct: 54 IDGRSVKSCTHLAVQCDGSEVLTVEGLAN-KGVLHAVQEGFYKEHGLQCGFCTPGMLMRA 112
Query: 115 FSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADA 161
+ L P P T +E + GNLCRCTGY+ I A
Sbjct: 113 YRFL-----QENPNP-------TEAEIRMGMTGNLCRCTGYQNIVKA 147
>pdb|3HRD|B Chain B, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|F Chain F, Crystal Structure Of Nicotinate Dehydrogenase
Length = 330
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 130/333 (39%), Gaps = 52/333 (15%)
Query: 1029 SNLWQKRGICRVPIVHEMFVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFAL 1088
++W G +P FV+ I DGS V G ++GQG T + Q+AA
Sbjct: 9 GSMWYGIGNTGLPNPAAAFVE-------IHGDGSANVMFGAADIGQGSGTAMAQIAAE-- 59
Query: 1089 SSVQGGELGDLLDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRLCCNVLVERLSALRG 1148
ELG +K+ V DT+ AV L C E L+
Sbjct: 60 ------ELGLDYEKIHVTWGDTMVTPDGGATSASRQTLITGNAVILACRQAKETLAKTAA 113
Query: 1149 RLLE--------RMGSV----NWETLIQQAHLQSVNLSASSL------YVPDSTSI---- 1186
L+ R +V + E + L + +A + Y P++T +
Sbjct: 114 EKLDCAPEELSFRDNTVFITADPERSMTYGELMAAMKAAGRMAVGAGSYNPNTTGLAPEN 173
Query: 1187 ---------HYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIG 1237
Y A VEV+ TGE +L+ +D G +N ++ GQIEG G G
Sbjct: 174 MSGIPFEVYSYATTIAEVEVDTETGEVDVLKVVSAHDVGTPINRSMVEGQIEGGVTMGQG 233
Query: 1238 FFMLEEYPTNS-DGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPP 1296
F ++EE N+ +G + + Y IP+ +P+ ++ + + G +K GEP
Sbjct: 234 FVLMEEIEVNTKNGAIKNPSMSKYIIPSNRDVPEIHSILVESEGGPGP--FGAKGVGEPA 291
Query: 1297 LLLAVSVHCATRAAIREARKQLLTWSDLDRSDI 1329
L+ + A AAI +A T + + DI
Sbjct: 292 LIPMIP---AVVAAIEDALGTRFTHTPIMPKDI 321
>pdb|1RM6|C Chain C, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1RM6|F Chain F, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|C Chain C, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|F Chain F, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
Length = 161
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 19/116 (16%)
Query: 55 VEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFH---ASQCGFCTPGMC 111
V+D +C TL V G + T E L + + A FH +QCGFCTPGM
Sbjct: 53 VDDRPRLACSTLAHQVAGKKVETVESLATQGT----LSKLQAAFHEKLGTQCGFCTPGMI 108
Query: 112 MSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFAA 167
M+ + L P P +R E + A+AGNLCRCTGY I + ++ AA
Sbjct: 109 MASEALL-----RKNPSP-------SRDEIKAALAGNLCRCTGYVKIIKSVETAAA 152
>pdb|3HRD|D Chain D, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|H Chain H, Crystal Structure Of Nicotinate Dehydrogenase
Length = 160
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 60 ISSCLTLLCSVNGCSITTSEGLG-NSKAGFHPIHQRFAGFHASQCGFCTPGMCMSLFSAL 118
+++C L + +I T EG+ + K + Q F A QCG+CTPGM ++ + L
Sbjct: 59 VTTCCMLAGQADESTIITLEGVAEDGKPSL--LQQCFLEAGAVQCGYCTPGMILTAKALL 116
Query: 119 VNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPI 158
P+P T E A++GNLCRCTGY I
Sbjct: 117 -----DKNPDP-------TDEEITVAMSGNLCRCTGYIKI 144
>pdb|3HRD|C Chain C, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|G Chain G, Crystal Structure Of Nicotinate Dehydrogenase
Length = 296
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 117/306 (38%), Gaps = 29/306 (9%)
Query: 228 PISVQELQNLLESHEDNNQTSIKLVVGNTGM--GYYKEVEHYDKYIDIRYIPELSMIRRD 285
P +++E + LL ++D ++ G T + E D IDI+ + EL IR +
Sbjct: 9 PKTLEEAKGLLHQYKD---VPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVE 65
Query: 286 ETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLV 345
E I IGA T ++ E H R + + ++ S IRN ++GGNL
Sbjct: 66 ENTIHIGALSTFTQI---------ENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLS 116
Query: 346 MAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFLERPPLDCRSVLLSIEIPYWDP 405
+ D + + + A V + + + L +F + R+ L + EI
Sbjct: 117 TS---SVAGDGVSAMTTLDATVVLESVRGTRQMKLTDFFDGEGFKRRNALEADEI----M 169
Query: 406 SRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFGAF 465
+ + D Y+ A R L + + K D + + G
Sbjct: 170 TEVIIDRPDAHSASAFYKLAKR------KSLAISVIGGGMAVKVDDAGVCTWASMRGGCI 223
Query: 466 GTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVVAEV-GTPNPAYRSSLAVGFLFEF 524
G ++ + ++ EE L G L+ + + + +L DTV P+ Y+ G +
Sbjct: 224 G-RYPLHFKQAEEMLVGAPLTMETMEATLPILHDTVYDMARARPSVLYKKESVQGVFKKL 282
Query: 525 FSSLTE 530
F + +
Sbjct: 283 FVDILD 288
>pdb|1T3Q|C Chain C, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|F Chain F, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 288
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 51/271 (18%)
Query: 224 SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMG--YYKEVEHYDKYIDIRYIPELSM 281
S+ P S+QE+ +L D +++ G + + + +D+R + EL
Sbjct: 7 SYRAPASLQEVIQVLADDPDA-----RIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFE 61
Query: 282 IRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVG 341
I + + +GA VT + +T +CV + K+ H +A +RN ++G
Sbjct: 62 ISQSAGILSVGAMVT------HFRNKTDPTVAKCVPILPKVLAH---VAHQAVRNRGTLG 112
Query: 342 GNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFLER---PPLDCRSVLLSI 398
G+L A +++ ++ +GA + I +F++ L+ VL+ +
Sbjct: 113 GSLAHADAG---AEMPFLMATLGATMYIASSAGVRSVSATDFMKGHYFTDLEAGEVLVRV 169
Query: 399 EIP----YWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIM 454
EIP +W+ F+ Y R G+ A +A G R +
Sbjct: 170 EIPIPALHWE--------------FDEY---ARRKGD-----YALVMAAAGLSMQGGRCV 207
Query: 455 VNNCQLAFGAFGTKHAIRARRVEEFLTGKLL 485
++A GA + A +A R +FL GK++
Sbjct: 208 A--ARIALGAV-EERAHQAIRANDFLVGKVI 235
>pdb|1FFU|C Chain C, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFU|F Chain F, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
Length = 287
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 21/125 (16%)
Query: 225 WHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMG-----YYKEVEHYDKYIDIRYIPEL 279
+H P SV E LL + KL+ G + + + EH IDI IPEL
Sbjct: 8 YHAPKSVGEAVALL----GQLGSDAKLLAGGHSLLPMMKLRFAQPEHL---IDINRIPEL 60
Query: 280 SMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSAS 339
IR + + + IGA + I S + + +AE + IA +RN +
Sbjct: 61 RGIREEGSTVVIGAMTVENDLISSPIVQAR---------LPLLAEAAKLIADPQVRNRGT 111
Query: 340 VGGNL 344
+GG++
Sbjct: 112 IGGDI 116
>pdb|1FFV|C Chain C, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|F Chain F, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 287
Score = 33.5 bits (75), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 21/125 (16%)
Query: 225 WHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMG-----YYKEVEHYDKYIDIRYIPEL 279
+H P SV E LL + KL+ G + + + EH IDI IPEL
Sbjct: 8 YHAPKSVGEAVALL----GQLGSDAKLLAGGHSLLPMMKLRFAQPEHL---IDINRIPEL 60
Query: 280 SMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSAS 339
IR + + + IGA + I S + + +AE + IA +RN +
Sbjct: 61 RGIREEGSTVVIGAMTVENDLISSPIVQAR---------LPLLAEAAKLIADPQVRNRGT 111
Query: 340 VGGNL 344
+GG++
Sbjct: 112 IGGDI 116
>pdb|3AGR|A Chain A, Crystal Structure Of Nucleoside Triphosphate Hydrolases From
Neospora Caninum
pdb|3AGR|B Chain B, Crystal Structure Of Nucleoside Triphosphate Hydrolases From
Neospora Caninum
Length = 602
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 976 VRSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKR 1035
+R++NL L + S+ I + + +L V+SS KE + ++ +
Sbjct: 275 IRAVNLQHERFLPSRFPSAD------VISVSFMQLGVASSSGL---FFKELCSNAEFRHQ 325
Query: 1036 GICRVPIVHEMFVKS-SPGKVSILSDGSIVVE 1066
GIC P + F ++ S G V IL DG+IVV+
Sbjct: 326 GICYNPCIFRGFRQACSAGDVEILPDGTIVVD 357
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,013,319
Number of Sequences: 62578
Number of extensions: 1477174
Number of successful extensions: 3672
Number of sequences better than 100.0: 51
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3400
Number of HSP's gapped (non-prelim): 78
length of query: 1362
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1251
effective length of database: 8,027,179
effective search space: 10042000929
effective search space used: 10042000929
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)