Query 000669
Match_columns 1362
No_of_seqs 512 out of 3980
Neff 7.0
Searched_HMMs 46136
Date Mon Apr 1 21:39:22 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000669.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000669hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00192 aldehyde oxidase 100.0 1E-261 2E-266 2556.1 134.0 1309 7-1359 21-1342(1344)
2 KOG0430 Xanthine dehydrogenase 100.0 3E-263 7E-268 2362.9 104.5 1228 6-1354 17-1255(1257)
3 PLN02906 xanthine dehydrogenas 100.0 1E-254 3E-259 2489.4 131.6 1241 9-1350 1-1313(1319)
4 TIGR02969 mam_aldehyde_ox alde 100.0 3E-253 6E-258 2473.6 127.8 1246 7-1355 18-1316(1330)
5 PRK09800 putative hypoxanthine 100.0 3E-172 7E-177 1648.3 92.7 709 584-1347 170-954 (956)
6 TIGR03313 Se_sel_red_Mo probab 100.0 4E-170 8E-175 1631.7 90.3 709 584-1347 166-950 (951)
7 TIGR03311 Se_dep_Molyb_1 selen 100.0 3E-164 5E-169 1570.1 82.2 670 586-1343 162-847 (848)
8 TIGR02965 xanthine_xdhB xanthi 100.0 2E-148 5E-153 1417.1 77.7 720 586-1348 1-756 (758)
9 COG4631 XdhB Xanthine dehydrog 100.0 2E-146 5E-151 1237.5 53.9 722 583-1348 16-773 (781)
10 PRK09970 xanthine dehydrogenas 100.0 7E-144 2E-148 1377.3 77.3 708 585-1348 2-755 (759)
11 TIGR03194 4hydrxCoA_A 4-hydrox 100.0 1E-143 2E-148 1369.8 74.7 695 590-1346 1-746 (746)
12 TIGR02416 CO_dehy_Mo_lg carbon 100.0 2E-142 3E-147 1365.1 76.3 705 594-1344 1-769 (770)
13 TIGR03196 pucD xanthine dehydr 100.0 8E-141 2E-145 1345.2 74.0 699 585-1343 2-768 (768)
14 COG1529 CoxL Aerobic-type carb 100.0 8E-112 2E-116 1073.9 69.4 703 583-1347 3-730 (731)
15 COG4630 XdhA Xanthine dehydrog 100.0 3E-105 7E-110 875.5 30.1 449 7-532 24-482 (493)
16 PF02738 Ald_Xan_dh_C2: Molybd 100.0 5E-101 1E-105 957.8 47.5 507 735-1269 16-547 (547)
17 TIGR02963 xanthine_xdhA xanthi 100.0 1E-99 2E-104 915.9 46.9 444 7-527 16-466 (467)
18 PRK09971 xanthine dehydrogenas 100.0 6E-52 1.3E-56 475.8 28.5 274 224-531 6-286 (291)
19 TIGR03195 4hydrxCoA_B 4-hydrox 100.0 4.1E-49 9E-54 452.0 29.0 274 222-529 4-320 (321)
20 TIGR03199 pucC xanthine dehydr 100.0 5.2E-49 1.1E-53 446.1 26.0 258 228-522 1-263 (264)
21 COG1319 CoxM Aerobic-type carb 100.0 2.9E-47 6.3E-52 426.0 22.5 273 222-531 3-282 (284)
22 PRK09799 putative oxidoreducta 100.0 2.5E-45 5.4E-50 413.0 25.7 249 224-531 4-254 (258)
23 TIGR03193 4hydroxCoAred 4-hydr 100.0 2.9E-46 6.2E-51 376.8 13.6 133 7-166 16-148 (148)
24 TIGR03312 Se_sel_red_FAD proba 100.0 9.1E-45 2E-49 407.8 25.3 250 224-531 3-253 (257)
25 PRK09908 xanthine dehydrogenas 100.0 1.1E-45 2.3E-50 376.3 14.3 133 7-165 23-155 (159)
26 TIGR03198 pucE xanthine dehydr 100.0 3.6E-45 7.9E-50 372.3 14.2 133 7-167 18-150 (151)
27 PRK11433 aldehyde oxidoreducta 100.0 6.5E-44 1.4E-48 379.9 13.7 146 7-168 66-215 (217)
28 COG2080 CoxS Aerobic-type carb 100.0 8.7E-44 1.9E-48 357.2 13.7 135 7-167 18-152 (156)
29 PF00941 FAD_binding_5: FAD bi 100.0 2.1E-36 4.6E-41 321.2 13.6 165 222-403 2-171 (171)
30 PF01799 Fer2_2: [2Fe-2S] bind 100.0 1.1E-29 2.4E-34 228.9 6.7 75 77-164 1-75 (75)
31 PF01315 Ald_Xan_dh_C: Aldehyd 99.9 1.6E-27 3.4E-32 234.8 8.3 107 600-711 1-110 (111)
32 PF03450 CO_deh_flav_C: CO deh 99.7 4E-16 8.7E-21 152.3 12.3 101 421-528 2-103 (103)
33 COG1529 CoxL Aerobic-type carb 99.4 4E-15 8.6E-20 190.9 -5.1 431 560-1078 160-622 (731)
34 PRK12386 fumarate reductase ir 98.4 2.3E-07 4.9E-12 104.3 5.3 66 7-83 27-93 (251)
35 PRK05950 sdhB succinate dehydr 97.9 1.1E-05 2.3E-10 90.7 4.5 65 8-83 27-91 (232)
36 TIGR00384 dhsB succinate dehyd 97.7 3E-05 6.6E-10 86.4 3.8 66 7-83 22-87 (220)
37 PRK12576 succinate dehydrogena 97.4 0.00012 2.6E-09 84.2 4.1 64 7-83 32-100 (279)
38 PF13085 Fer2_3: 2Fe-2S iron-s 97.0 0.00063 1.4E-08 67.0 4.5 62 9-83 31-94 (110)
39 PRK14652 UDP-N-acetylenolpyruv 96.6 0.0069 1.5E-07 70.7 9.0 163 216-405 29-195 (302)
40 PRK12385 fumarate reductase ir 96.4 0.0025 5.4E-08 72.1 3.8 61 8-83 33-96 (244)
41 PF01565 FAD_binding_4: FAD bi 95.9 0.009 2E-07 61.5 4.9 106 224-349 3-109 (139)
42 PRK14653 UDP-N-acetylenolpyruv 95.7 0.045 9.9E-07 63.7 10.1 160 216-404 27-192 (297)
43 TIGR01676 GLDHase galactonolac 95.6 0.029 6.2E-07 70.0 8.0 107 222-349 62-168 (541)
44 PRK13905 murB UDP-N-acetylenol 95.5 0.08 1.7E-06 62.0 11.0 163 216-405 24-192 (298)
45 COG0277 GlcD FAD/FMN-containin 95.2 0.031 6.8E-07 69.2 6.8 109 222-349 32-140 (459)
46 PRK12436 UDP-N-acetylenolpyruv 94.9 0.14 3.1E-06 60.0 10.8 155 222-404 37-196 (305)
47 PRK11230 glycolate oxidase sub 94.8 0.061 1.3E-06 67.4 7.9 109 223-349 57-165 (499)
48 PRK14650 UDP-N-acetylenolpyruv 94.4 0.37 8.1E-06 56.2 12.3 162 216-404 26-193 (302)
49 PRK13552 frdB fumarate reducta 94.3 0.041 9E-07 62.2 4.1 60 10-83 37-96 (239)
50 TIGR00387 glcD glycolate oxida 94.2 0.053 1.2E-06 66.5 5.2 106 226-349 2-107 (413)
51 PRK11183 D-lactate dehydrogena 94.1 0.11 2.4E-06 64.2 7.6 111 222-350 39-154 (564)
52 PRK08640 sdhB succinate dehydr 93.9 0.048 1E-06 62.0 3.8 59 10-83 36-101 (249)
53 TIGR00179 murB UDP-N-acetyleno 93.9 0.14 3.1E-06 59.4 7.7 159 217-402 7-172 (284)
54 TIGR01678 FAD_lactone_ox sugar 93.8 0.11 2.3E-06 64.1 6.9 106 223-349 16-121 (438)
55 PRK13906 murB UDP-N-acetylenol 93.7 0.44 9.5E-06 56.0 11.4 155 222-404 37-196 (307)
56 PLN02465 L-galactono-1,4-lacto 93.7 0.11 2.3E-06 65.6 6.6 106 222-348 97-202 (573)
57 PLN00129 succinate dehydrogena 93.6 0.061 1.3E-06 61.7 4.0 61 9-83 75-135 (276)
58 PRK12577 succinate dehydrogena 93.5 0.26 5.7E-06 58.5 9.2 65 8-83 27-101 (329)
59 TIGR01679 bact_FAD_ox FAD-link 93.5 0.18 4E-06 61.9 8.2 103 223-349 13-115 (419)
60 PLN02805 D-lactate dehydrogena 92.9 0.17 3.7E-06 64.1 6.8 107 223-349 135-241 (555)
61 PRK08493 NADH dehydrogenase su 92.8 0.092 2E-06 68.9 4.3 86 9-109 16-102 (819)
62 PRK06259 succinate dehydrogena 92.4 0.18 4E-06 63.2 6.1 57 8-79 29-88 (486)
63 PRK07570 succinate dehydrogena 92.4 0.095 2.1E-06 59.6 3.2 45 28-82 53-103 (250)
64 COG0479 FrdB Succinate dehydro 92.1 0.13 2.9E-06 57.3 3.9 60 10-83 33-92 (234)
65 PRK12575 succinate dehydrogena 91.5 0.14 3E-06 57.7 3.3 59 9-83 36-94 (235)
66 TIGR01677 pln_FAD_oxido plant- 91.3 0.42 9E-06 60.6 7.5 83 223-306 33-118 (557)
67 PRK12814 putative NADPH-depend 91.0 0.21 4.5E-06 64.9 4.6 83 8-107 17-101 (652)
68 PF13510 Fer2_4: 2Fe-2S iron-s 90.8 0.22 4.8E-06 46.7 3.4 57 9-78 18-80 (82)
69 cd00207 fer2 2Fe-2S iron-sulfu 89.7 0.21 4.6E-06 46.5 2.3 54 8-67 16-77 (84)
70 PRK09970 xanthine dehydrogenas 89.0 5.9 0.00013 52.6 15.5 61 767-827 457-529 (759)
71 PRK00046 murB UDP-N-acetylenol 88.9 2.7 5.9E-05 49.9 11.2 84 216-306 14-103 (334)
72 TIGR03194 4hydrxCoA_A 4-hydrox 88.3 4.6 9.9E-05 53.4 13.8 59 768-826 442-511 (746)
73 PRK11282 glcE glycolate oxidas 87.9 0.98 2.1E-05 54.1 6.7 86 246-349 18-103 (352)
74 COG0812 MurB UDP-N-acetylmuram 86.9 8.3 0.00018 44.8 13.0 161 216-405 14-183 (291)
75 PRK14651 UDP-N-acetylenolpyruv 85.5 6.3 0.00014 45.5 11.2 154 216-405 14-170 (273)
76 PRK13903 murB UDP-N-acetylenol 85.0 2.7 5.8E-05 50.5 8.3 85 216-306 26-113 (363)
77 TIGR03311 Se_dep_Molyb_1 selen 84.9 7.1 0.00015 52.4 12.9 135 7-169 13-147 (848)
78 PLN02441 cytokinin dehydrogena 84.7 2.1 4.5E-05 53.8 7.5 83 223-306 66-155 (525)
79 PRK14648 UDP-N-acetylenolpyruv 83.0 2.5 5.4E-05 50.4 6.7 89 216-306 23-114 (354)
80 PRK14649 UDP-N-acetylenolpyruv 82.3 2 4.2E-05 50.4 5.5 87 216-306 14-103 (295)
81 PRK07569 bidirectional hydroge 80.9 2.1 4.5E-05 48.4 5.0 86 8-110 17-107 (234)
82 TIGR02416 CO_dehy_Mo_lg carbon 75.6 4.4 9.6E-05 53.8 6.4 57 771-827 476-543 (770)
83 TIGR02965 xanthine_xdhB xanthi 72.9 4.8 0.0001 53.4 5.8 59 769-827 446-515 (758)
84 TIGR03313 Se_sel_red_Mo probab 70.9 6.8 0.00015 53.1 6.5 133 7-167 13-146 (951)
85 PRK09800 putative hypoxanthine 70.8 8.3 0.00018 52.3 7.3 134 7-168 17-151 (956)
86 PF00111 Fer2: 2Fe-2S iron-sul 65.1 4.5 9.8E-05 37.1 2.2 32 9-46 15-48 (78)
87 PLN00192 aldehyde oxidase 64.3 2E+02 0.0044 41.0 18.8 60 1049-1127 762-821 (1344)
88 PLN02906 xanthine dehydrogenas 60.8 16 0.00034 51.5 7.2 60 768-827 1010-1080(1319)
89 TIGR02969 mam_aldehyde_ox alde 60.1 12 0.00026 52.6 5.9 59 768-826 1015-1084(1330)
90 TIGR03196 pucD xanthine dehydr 59.8 16 0.00034 48.7 6.6 56 772-827 467-535 (768)
91 PF02738 Ald_Xan_dh_C2: Molybd 58.9 12 0.00026 47.8 5.2 57 770-826 319-386 (547)
92 PRK07860 NADH dehydrogenase su 50.9 9.4 0.0002 51.0 2.5 90 9-112 19-112 (797)
93 PF02594 DUF167: Uncharacteris 48.2 65 0.0014 30.0 6.8 53 1052-1112 17-69 (77)
94 PRK09129 NADH dehydrogenase su 44.7 25 0.00054 47.0 5.0 89 9-116 16-111 (776)
95 PRK00054 dihydroorotate dehydr 43.2 8.9 0.00019 43.6 0.4 16 30-45 214-229 (250)
96 PF10437 Lip_prot_lig_C: Bacte 43.0 1E+02 0.0022 29.0 7.5 43 452-497 26-68 (86)
97 TIGR01973 NuoG NADH-quinone ox 42.8 20 0.00043 46.4 3.5 81 9-110 13-103 (603)
98 cd06192 DHOD_e_trans_like FAD/ 42.1 14 0.00029 41.8 1.7 17 29-45 212-228 (243)
99 PRK10713 2Fe-2S ferredoxin Yfa 41.0 14 0.00029 34.9 1.2 30 10-45 20-49 (84)
100 TIGR02911 sulfite_red_B sulfit 40.0 11 0.00024 43.2 0.6 19 26-44 222-240 (261)
101 PTZ00305 NADH:ubiquinone oxido 36.3 31 0.00067 40.1 3.3 61 34-110 109-173 (297)
102 PF10418 DHODB_Fe-S_bind: Iron 33.5 22 0.00048 28.8 1.1 17 30-46 3-19 (40)
103 TIGR02008 fdx_plant ferredoxin 33.3 23 0.00051 34.2 1.5 32 8-45 21-52 (97)
104 PRK08221 anaerobic sulfite red 32.1 17 0.00037 41.8 0.4 18 27-44 225-242 (263)
105 PRK09130 NADH dehydrogenase su 28.9 44 0.00095 44.0 3.4 59 35-108 42-104 (687)
106 KOG2282 NADH-ubiquinone oxidor 27.9 41 0.00089 41.4 2.5 63 35-109 73-135 (708)
107 CHL00134 petF ferredoxin; Vali 26.8 38 0.00083 33.0 1.8 30 10-45 25-54 (99)
108 cd06220 DHOD_e_trans_like2 FAD 24.2 35 0.00076 38.3 1.1 16 30-45 200-215 (233)
109 COG0633 Fdx Ferredoxin [Energy 23.9 45 0.00098 32.7 1.7 31 10-46 23-53 (102)
110 PRK13904 murB UDP-N-acetylenol 23.7 1.3E+02 0.0028 34.7 5.5 74 216-306 12-86 (257)
111 PLN03136 Ferredoxin; Provision 23.6 45 0.00098 35.1 1.7 16 30-45 88-103 (148)
112 cd06219 DHOD_e_trans_like1 FAD 23.5 60 0.0013 36.9 2.8 26 20-45 202-228 (248)
113 PRK05802 hypothetical protein; 23.5 38 0.00083 40.2 1.3 17 29-45 288-304 (320)
114 PRK08166 NADH dehydrogenase su 21.9 47 0.001 44.9 1.8 89 9-110 16-110 (847)
115 KOG4730 D-arabinono-1, 4-lacto 21.8 1.4E+02 0.0031 36.7 5.4 80 224-306 52-131 (518)
No 1
>PLN00192 aldehyde oxidase
Probab=100.00 E-value=1e-261 Score=2556.08 Aligned_cols=1309 Identities=73% Similarity=1.136 Sum_probs=1132.0
Q ss_pred CCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
.|+.|||.+||+. |+|||||+||+||+||||||+|+++++.++++++++|||||+|++++||++|+|||||++.++
T Consensus 21 ~p~~~Ll~~LR~~----~~ltgtK~gC~~G~CGaCtV~v~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 96 (1344)
T PLN00192 21 DPSTTLLEFLRTQ----TPFKSVKLGCGEGGCGACVVLLSKYDPVLDQVEDFTVSSCLTLLCSVNGCSITTSEGLGNSKD 96 (1344)
T ss_pred CCCCcHHHHHHHh----hCCCCcCCCCCCCcCCCcEEEEeeccccccCcCCcEEehHHHHHHHhCCCEEEeecCcCCCCC
Confidence 6899999999985 556699999999999999999999999999999999999999999999999999999996467
Q ss_pred CccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHHh
Q 000669 87 GFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166 (1362)
Q Consensus 87 ~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~~ 166 (1362)
.|||||++|+++||+|||||||||||+||+||+++....+|+|.++.+++|++||+++|+||||||||||||++|+++++
T Consensus 97 ~lhpvq~a~~~~~~~QCGfCtpG~vms~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCRCtgY~~i~~a~~~~~ 176 (1344)
T PLN00192 97 GFHPIHKRFAGFHASQCGFCTPGMCISLFSALVNADKTDRPEPPSGFSKLTVVEAEKAVSGNLCRCTGYRPIVDACKSFA 176 (1344)
T ss_pred CCCHHHHHHHHcCCCccCCCChHHHHHHHHHHHhcccccCCCcccccCCCCHHHHHHHhcCCceeCCCCHHHHHHHHHHH
Confidence 89999999999999999999999999999999652100012321111235799999999999999999999999999999
Q ss_pred hcccccccCCCcccCCCCCCCCCCCCCCCCCCCCCCCcCCchhhcc--ccccccccCCceEEecCCHHHHHHHHHcccCC
Q 000669 167 ADVDIEDLGFNSFWGKGESKEVKPSRLPPCKRNGDIFTFPQFRKKE--NKSWMLLDVKGSWHNPISVQELQNLLESHEDN 244 (1362)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fp~~l~~~--~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~~ 244 (1362)
.+.++++++.++|++++++.....++++++++++++|+| |+|+.. ....+.+..+++|++|+||+||+++|+++..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~sl~ea~~ll~~~~~- 254 (1344)
T PLN00192 177 ADVDIEDLGLNSFWKKGESEEAKLSKLPPYNHSDHICTF-PEFLKKEIKSSLLLDSSRYRWYTPVSVEELQSLLESNNF- 254 (1344)
T ss_pred hhccchhcccccccccCCcchhhhhhcccCCCccccccC-hhhhhcccCccceecCCCceEECcCCHHHHHHHHHhCCC-
Confidence 887777776455655332223344688999999988889 455432 1222344447899999999999999996410
Q ss_pred CCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHHHHHHhhhcccchhhhhHHHHHH
Q 000669 245 NQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAE 324 (1362)
Q Consensus 245 ~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~ 324 (1362)
..+++++|||||+|++++....|+++|||++|+||+.|+.++++|+|||+|||+++++++.... .+ ..++|.|.+
T Consensus 255 ~~~~a~lvAGgTdl~~~k~~~~p~~lIdi~~I~EL~~I~~~~~~l~IGA~vTl~el~~~l~~~~--~~---~~~~p~L~~ 329 (1344)
T PLN00192 255 DGVSVKLVVGNTGTGYYKDEELYDKYIDIRHIPELSMIRRDEKGIEIGAVVTISKAIEALREES--KS---EYVFKKIAD 329 (1344)
T ss_pred CCCCeEEEEeCCcceeeeccCCCCeEEEcCCChhhhcEEecCCEEEEeecCcHHHHHHHHHhhc--cc---cchHHHHHH
Confidence 0248999999999988766567899999999999999999999999999999999998866520 00 015899999
Q ss_pred HHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCceEEEehhhhhcCCCCCCCceEEEEEecCCC
Q 000669 325 HMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFLERPPLDCRSVLLSIEIPYWD 404 (1362)
Q Consensus 325 ~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g~R~vpl~dF~~~~~l~~~EiI~~I~iP~~~ 404 (1362)
++++|||+||||+||||||||+++|.+++||++|+|+||||+|+|.+.+|.|+||++|||.++.++++|||++|+||.+.
T Consensus 330 ~~~~vAs~qIRN~aTlGGNI~~Asp~~p~sD~~p~LlAl~A~v~l~s~~g~R~vpl~dFf~~~~l~~~Eil~~I~iP~~~ 409 (1344)
T PLN00192 330 HMEKIASRFVRNTGSIGGNLVMAQRKQFPSDIATILLAAGSTVNIQNASKREKLTLEEFLERPPLDSKSLLLSVEIPSWT 409 (1344)
T ss_pred HHHHhcChhhccceechhhhcccCCCCCchhHHHHHHHhCcEEEEEeCCceEEEeHHHHhccCccCCcceEEEEEccCCc
Confidence 99999999999999999999999975556999999999999999999999999999999999899999999999999654
Q ss_pred CCCCCcccccccceeeeeeeccCCCCCccceeEEEEEEEEccCCCCCCceeeeeEEEEcccCC-CCcccHHHHHHHHcCC
Q 000669 405 PSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFGAFGT-KHAIRARRVEEFLTGK 483 (1362)
Q Consensus 405 ~~~~~~~~~~~~~~~~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~Ggv~~-~~p~ra~~~E~~L~Gk 483 (1362)
.. .+.....+|.+||+++||+++|||+||+||.++++.+...++++|+++||+||||++ + |+|++++|++|.||
T Consensus 410 ~~----~~~~~~~~f~~yk~~~Rr~~~diA~V~aA~~v~~~~~~~~~~~~i~~aria~Ggvap~~-P~ra~~~E~~L~Gk 484 (1344)
T PLN00192 410 SS----SGSDTKLLFETYRAAPRPLGNALPYLNAAFLAEVSQDASSGGIVVNDCRLAFGAYGTKH-AIRARKVEEFLTGK 484 (1344)
T ss_pred cc----cccCcccceeeeeecccccccchhhheeeEEEEEEecccCCCCeEeEEEEEEecCCCCc-eecHHHHHHHhcCC
Confidence 20 000124678899999995589999999999999851100013489999999999999 6 99999999999999
Q ss_pred CCCHHHHHHHHHHHhccccccCCCCCHHHHHHHHHHHHHHHHHHhhhhhc-cccccccCCCCCCCCcccccccccccccc
Q 000669 484 LLSFDVLYEAIILLRDTVVAEVGTPNPAYRSSLAVGFLFEFFSSLTETNV-EISRSSLCGYGNDFSLKDSKVQQYYDLSD 562 (1362)
Q Consensus 484 ~~~~~~l~~a~~~l~~~~~p~~d~~s~~YR~~la~~L~~r~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (1362)
+|+++++++|++++.+++.|.++.+|++||++|+.+|++|||.++++++. ..++.+ ++.....+.+ -.+.
T Consensus 485 ~~~~~~l~~A~~~l~~~~~p~~~~~s~eYRr~la~~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~ 555 (1344)
T PLN00192 485 VLSDSVLYEAVRLLKGIVVPEDGTSHPEYRSSLAVGFLFDFLSPLIESNAKSSNGWL-DGGSNTKQNP--------DQHD 555 (1344)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccccccccc-cccccccccc--------cccc
Confidence 99999999999999999999888899999999999999999999987651 111111 0000000000 0122
Q ss_pred cccCCccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCC
Q 000669 563 KNKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPC 642 (1362)
Q Consensus 563 ~~~~~~~~~~~~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~p 642 (1362)
....+++++++.|.|++.+++++|||+++|+|+.+|+||+++|++|++.+|||||+++||||++||+|++||+++|+++|
T Consensus 556 ~~~~~~~~~~~~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~p 635 (1344)
T PLN00192 556 DVKKPTLLLSSKQQVEENNEYHPVGEPIKKVGAALQASGEAVYVDDIPSPKNCLYGAFIYSTKPLARVKGIKFKSNLVPQ 635 (1344)
T ss_pred cccccCCCCCcceeeecccccCcCCCCCcChhhHhhcccceecccccCCCCCCEEEEEEecCCCceEEEEEEhHHhhcCC
Confidence 34578899999999998899999999999999999999999999999756899999999999999999999999999999
Q ss_pred CeEEEEEcCCCCCCCCCcccccCCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccC--CCCCcCCHHH
Q 000669 643 GVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMEN--LEPPILSVEE 720 (1362)
Q Consensus 643 GVv~vvt~~Dip~~g~n~~~~~~~~~~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~--l~p~v~~~~~ 720 (1362)
||++|+|++|+|..+.|++......|+|+|++++|+|+|||||+|||+|+++|++|+++|+|+| |+ |.|+++|+++
T Consensus 636 GV~aV~t~~Dip~~~~~~g~~~~~~~~~~la~~~Vr~~Gq~Va~VvA~t~~~A~~Aa~~V~VeY--e~~~l~p~v~~i~~ 713 (1344)
T PLN00192 636 GVLAVITFKDIPKGGQNIGSKTIFGPEPLFADEVTRCAGQRIALVVADTQKHADMAANLAVVEY--DTENLEPPILTVED 713 (1344)
T ss_pred CcEEEEchHHcCcccccCCCCCCCCCceeccCCEEEEcCCeEEEEEECCHHHHHHHhccCEEEE--ecCCCCCcccCHHH
Confidence 9999999999984333343222235889999999999999999999999999999999999999 54 3378999999
Q ss_pred HHhcCCCcccCCCccccccCchhhhhhccccceEEEEEEeCcccCCCCCCCcEEEEECCCCcEEEEeCCCChHHHHHHHH
Q 000669 721 AVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATIS 800 (1362)
Q Consensus 721 Al~~~~~~~~~~~~~~~~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~vA 800 (1362)
|++++++++.+........||++++|++|+++++|++|++++|+|+||||++|+|+|++||.|+||+|||+|+.+|..||
T Consensus 714 Al~~~s~~~~~~~~~~~~~GD~~~af~~a~~vv~e~~~~~~~q~H~~mEp~~~vA~~~~dg~l~V~~sTQ~p~~~r~~vA 793 (1344)
T PLN00192 714 AVKRSSLFEVPPFLYPKPVGDISKGMAEADHKILSAEIKLGSQYYFYMETQTALALPDEDNCIVVYSSTQCPEYVHSVIA 793 (1344)
T ss_pred HhcCCCCcccChhhcccccCCHHHHhccCCeEEEEEEEEECCEeeeeccCceEEEEEcCCCCEEEEECCCCHHHHHHHHH
Confidence 99998875422212235679999999999986459999999999999999999999998888999999999999999999
Q ss_pred HHhCCCCccEEEEEccCCCCCCCccCcccccccchhhhhhhhhHHHHHHHHHHhcCCCEEEEeCHHHHHhhcCCCCcEEE
Q 000669 801 RCLGIPQHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKI 880 (1362)
Q Consensus 801 ~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gRPVkl~~tReed~~~~~~R~~~~~ 880 (1362)
++||||++||||+++++|||||+|..+..+ ++++||++|+++||||||+|||+|+|.++++|||+.+
T Consensus 794 ~~Lgip~~~VrV~~~~vGGgFGgK~~~~~~-------------~~~~aAlaA~~~gRPVr~~~sR~Edm~~~~~R~~~~~ 860 (1344)
T PLN00192 794 RCLGIPEHNVRVITRRVGGGFGGKAVKSMP-------------VATACALAAFKLQRPVRMYLNRKTDMIMAGGRHPMKI 860 (1344)
T ss_pred HHhCCChHHEEEEecccccCCCccccccch-------------HHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEE
Confidence 999999999999999999999999876544 6789999999999999999999999999999999999
Q ss_pred EEEEeeCCCCcEEEEEEEEEecCCCCCCCCchhhHHhhccCCCCcCCcEEEEEEEeecCCCCccccCCCChhHHHHHHHH
Q 000669 881 SYSVGFKSNGKITALQLNILIDAGMYPDISPVMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEA 960 (1362)
Q Consensus 881 ~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~ 960 (1362)
+||+|+|+||+|++++++++.|+|+|.+.+.++...+.+..++|+|||++++++.|+||++|+|||||||.+|++|++|+
T Consensus 861 ~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~ 940 (1344)
T PLN00192 861 TYSVGFKSDGKITALHLDILINAGISPDISPIMPRNIIGALKKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIAEA 940 (1344)
T ss_pred EEEEEECCCCCEEEEEEEEEEecccCCCcchHHHHHHhhcCCCcCCCceEEEEEEEECCCCCCCcccCCCHHHHHHHHHH
Confidence 99999999999999999999999999887765555555777999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHhhCCCCCCccccccCCCCCcccCCHHHHHHHHHHhCCchhHHHHHHHHhhcCCCceeeeeee
Q 000669 961 VIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRV 1040 (1362)
Q Consensus 961 ~md~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGi~~a 1040 (1362)
+||++|++|||||+|||++||+++++...+|..+.|...++.+++||+++++.++|++|++++++||+.|+|+|||+|++
T Consensus 941 ~mD~lA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGig~~ 1020 (1344)
T PLN00192 941 IIEHVASTLSMDVDSVRKINLHTYESLKLFYGDSAGEPSEYTLPSIWDKLASSSEFKQRTEMVKEFNRSNKWKKRGISRV 1020 (1344)
T ss_pred HHHHHHHHhCcCHHHHHHhcCCCccccccCCCCcccccCCCcHHHHHHHHHHhcChHHHHHHHHHHhhcCCceEEEEEEE
Confidence 99999999999999999999997665444565554543345899999999999999999988899999999999999999
Q ss_pred eeEeecccCCCcEEEEEcCCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCc
Q 000669 1041 PIVHEMFVKSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTS 1120 (1362)
Q Consensus 1041 ~~~~~~~~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~ 1120 (1362)
+++|++++.++.+.|+|++||+|+|.+|++|||||++|+++||||++|||++++...-|+|+|+|..+||+.+||+++|+
T Consensus 1021 ~~~~~~~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~T~~aQiaA~~LGi~~~~~~~ip~e~I~v~~~dT~~~p~~~~t~ 1100 (1344)
T PLN00192 1021 PIVHEVMLRPTPGKVSILSDGSIAVEVGGIEIGQGLWTKVKQMAAFGLGMIKCDGGEDLLDKIRVIQSDTLSMIQGGFTA 1100 (1344)
T ss_pred EEEEeccccCCceEEEEeCCceEEEEECCCCCCCCHHHHHHHHHHHHhCCccccccCCChhhEEEEecCCCCCCCCCCCc
Confidence 99999988889999999999999999999999999999999999999994222111118999999999999999999999
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHhhhccCCCCHHHHHHHHhhcCceeEEEEEecCCCCCCcceeeEEE---EEE
Q 000669 1121 GSTTSESSCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQAHLQSVNLSASSLYVPDSTSIHYLNYGAA---VEV 1197 (1362)
Q Consensus 1121 gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~w~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~a~---VEV 1197 (1362)
|||+|+++|+||++||++|++||+++++++...++.++|.+++..++..+++|+++++|.++...+.|++||++ |||
T Consensus 1101 gSr~t~~~G~Av~~Ac~~l~~rl~~~a~~~~~~~~~~~~~~~~~~a~~~~~~L~a~~~~~~~~~~~~y~~~ga~~~eVEV 1180 (1344)
T PLN00192 1101 GSTTSESSCEAVRLCCVILVERLKPIKERLQEQMGSVTWDMLISQAYMQSVNLSASSYYTPDPSSMEYLNYGAAVSEVEV 1180 (1344)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHhcCCCCCeEEEEEECCCCCCccccceeEEEEEEEE
Confidence 99999999999999999999999999888765556899999998887667789999999764222346677776 999
Q ss_pred EccCCcEEEEEEEEEEecCCCCChhhhhhhhhchhHhhHHHHhhccceeCCCCccccCCCCCCCCCCCCCCCCccEEEEe
Q 000669 1198 NLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEIL 1277 (1362)
Q Consensus 1198 D~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~al~Ee~~~d~~G~~l~~~~~~Y~iP~~~diP~~~~v~l~ 1277 (1362)
|++||+++|+|+++++|||++|||.+++|||||||+||||++|+||+.||++|+++|++||+|+||++.|||.+|+|+++
T Consensus 1181 D~~TG~v~vlr~~~~~D~G~~INP~i~~GQIeGg~vqGiG~al~Ee~~yd~~G~llt~~~~dY~iPt~~DiP~~~~v~~~ 1260 (1344)
T PLN00192 1181 DLLTGETTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVVTDGTWTYKIPTVDTIPKQFNVEIL 1260 (1344)
T ss_pred ecCCCcEEEEEEEEEEecCcccCHHHHHHHHHHHHHHHHhHHhceeEEECCCCCCCCCChhhcCCCcccccCCceEEEEE
Confidence 99999999999999999999999999999999999999999999999999899999999999999999999966999999
Q ss_pred cCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhcccccCCCC----CcceeccCCCCChHHHHHHcCCChHHH
Q 000669 1278 NSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDR----SDITFNLEVPATMPVVKELCGLDSVER 1353 (1362)
Q Consensus 1278 ~~~~~p~g~~gsKgvGE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g----~~~~~~~~~P~tpe~i~~a~~~~~~~~ 1353 (1362)
+++.+|.|||||||+||+|++++++|++||+|||++||.+.. ..| .+.+|.++.|+|||+|+++|+++..+.
T Consensus 1261 e~~~~~~~p~gaKgvGE~~~~~~~~v~~Ai~~Ai~~Ar~~~~----~~g~~~~~~~~~~l~~pat~e~i~~~~~~~~~~~ 1336 (1344)
T PLN00192 1261 NSGHHKKRVLSSKASGEPPLLLAASVHCATRAAIREARKQLL----SWGGIDGSDSTFQLPVPATMPVVKELCGLDVVER 1336 (1344)
T ss_pred eCCCCCCCCCccccCccCcccccHHHHHHHHHHHHHHHhhhc----ccCCcccCCCceecCCCCChHHHHHhcCChHHHH
Confidence 987678999999999999999999999999999999998720 003 566799999999999999999988888
Q ss_pred HHHHHh
Q 000669 1354 YLQWRM 1359 (1362)
Q Consensus 1354 ~~~~~~ 1359 (1362)
++.++-
T Consensus 1337 ~~~~~~ 1342 (1344)
T PLN00192 1337 YLEWKI 1342 (1344)
T ss_pred hhhhhc
Confidence 877764
No 2
>KOG0430 consensus Xanthine dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.3e-263 Score=2362.88 Aligned_cols=1228 Identities=44% Similarity=0.693 Sum_probs=1123.7
Q ss_pred cCCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCC
Q 000669 6 RSQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSK 85 (1362)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~ 85 (1362)
--|.+||+++||. .|+|||||.||+||+||||||++++||+.+ ++.+.+|||||+|+++++|++|||+||||+++
T Consensus 17 vdP~~TL~~fLR~----k~~ltgtKlgC~EGGCGaCtv~ls~~dp~~-~~~~~avNsCLt~l~s~~g~~VtT~EGlGn~~ 91 (1257)
T KOG0430|consen 17 LPPDLTLNTFLRE----KLGLTGTKLGCGEGGCGACTVVLSKYDPEL-KVRHWAVNSCLTLLNSVHGLEVTTSEGLGNRR 91 (1257)
T ss_pred CCcchhHHHHHHH----hcCCcceeeccCCCCccceEEEEeccCCCc-eeEEeehhhhhhhcccccceEEEeeecccccc
Confidence 4699999999998 477789999999999999999999999998 99999999999999999999999999999988
Q ss_pred CCccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCC-CCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHH
Q 000669 86 AGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRP-EPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKS 164 (1362)
Q Consensus 86 ~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~-~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~ 164 (1362)
.++||||++|+++||+||||||||||||||+||.++ + .| |++||+++|+||||||||||||+||+|+
T Consensus 92 ~g~HPiq~RlA~~hgsQCGFCtPG~vmsmYalL~n~-----~~~~-------T~~eie~a~~GNLCRCTGYRPIldA~kS 159 (1257)
T KOG0430|consen 92 DGYHPIQERLAKMHGSQCGFCTPGFVMSMYALLRNS-----KNSP-------TMEEIENAFGGNLCRCTGYRPILDAMKS 159 (1257)
T ss_pred cCcCcHHHHHhhccCCcccCCCccHHHHHHHHHHhC-----CCCC-------CHHHHHHhhccceeeecCCchHHHHHhh
Confidence 899999999999999999999999999999999653 3 33 6999999999999999999999999999
Q ss_pred HhhcccccccCCCcccCCCCCCCCCCCCCCCCCCCCCCCcCCchhhccccccccccC-CceEEecCCHHHHHHHHHcccC
Q 000669 165 FAADVDIEDLGFNSFWGKGESKEVKPSRLPPCKRNGDIFTFPQFRKKENKSWMLLDV-KGSWHNPISVQELQNLLESHED 243 (1362)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fp~~l~~~~~~~~~~~~-~~~~~~P~sl~eal~ll~~~~~ 243 (1362)
||.+.++|+++++..|++ ++.....++ ++|||+++. +|||++....+. ..++. +.+|++|.||+|++++|+
T Consensus 160 Fa~d~~~~~~g~~~~~~~-~~~~~~~~~-~~~dp~~~~-i~~pe~~~~~~~-~~~~~~~~~W~~P~sl~eL~~~~~---- 231 (1257)
T KOG0430|consen 160 FAVDSDICGPGCDGFSIA-EEKDIEDLS-PPYDPKKEL-IFPPELLKRKKT-TLLGNDGIRWYWPVSLEELFELKA---- 231 (1257)
T ss_pred hccCCCccccCccccccc-ccccccccc-CCCCCccCc-ccChHHhccccc-cccCCCCcEEeCcccHHHHHHHHh----
Confidence 999999999876555554 333444555 899999877 677777654333 34443 899999999999999999
Q ss_pred CCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHHHHHHhhhcccchhhhhHHHHH
Q 000669 244 NNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIA 323 (1362)
Q Consensus 244 ~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~~~~~~~~~~~~~~~~~p~L~ 323 (1362)
+.+.+++|+|||..+++++....+++||+++||||+.++.++++|+|||++||+++++.++...+...+ ++++.+.
T Consensus 232 -~~~~~~Lv~GNT~~gv~~r~~~~~~~Id~~~v~el~~~~~~~~gi~lGa~~sls~~~~~l~~~~~~~~~---~~~~~~~ 307 (1257)
T KOG0430|consen 232 -NKPDAKLVAGNTAHGVYRRSPDYQKFIDVSGVPELKALNVDDNGLELGAALSLSETMELLRKLVKRPGF---EYFKALW 307 (1257)
T ss_pred -cCcceEEEeccccceEEeccCCCcceechhcCchhhhcccCCCceEEcccccHHHHHHHHHHHHhCcHH---HHHHHHH
Confidence 479999999999999976655699999999999999888899999999999999999998876552222 6899999
Q ss_pred HHHHhhhccchhcccccCCceecccCC-CCCCcHHHHHHHcCCEEEEEeCCc-eEEEehhhhhcCCCCCCCceEEEEEec
Q 000669 324 EHMEKIASTFIRNSASVGGNLVMAQRK-CFPSDIATILLAVGAKVNIMKGQK-CEKFMLEEFLERPPLDCRSVLLSIEIP 401 (1362)
Q Consensus 324 ~~~~~ias~qIRN~aTiGGNI~~asp~-~~~sDl~~~LlAldA~v~l~s~~g-~R~vpl~dF~~~~~l~~~EiI~~I~iP 401 (1362)
+|+++||++||||.|||||||+.+++. .||||++++|+|+||+|++.+..+ ..++.+++|.... |.++|||.+|.||
T Consensus 308 ~hl~~~A~~~IRN~atigGnI~~~~~~~~f~SDl~~~l~a~~a~v~~~~~~~~~~~~~l~~y~~~~-l~~~~illsv~ip 386 (1257)
T KOG0430|consen 308 EHLKWFANVQIRNVGTIGGNICTKAQSPEFPSDLFILLEALDAKVTILNNSGDLEKVFLEEYLGSS-LGAKEILLSVVLP 386 (1257)
T ss_pred HHHHHhcccceeccccccceeEeccCCCCCchhHHHHHHhhccEEEEeecCCccceeeHhhhhccc-cCcceEEEEEEcc
Confidence 999999999999999999999999884 789999999999999999998666 8899999998655 9999999999999
Q ss_pred CCCCCCCCcccccccceeeeeeeccCCCCCccceeEEEEEEEEccCCCCCCceeeeeEEEEcccCCCCcccHHHHHHHHc
Q 000669 402 YWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFGAFGTKHAIRARRVEEFLT 481 (1362)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~ 481 (1362)
.+. .+|.+||+++| +++|+|+||++|+... .+|+++||+|||++|. .+++.++|+.|.
T Consensus 387 ~~~------------~~f~~~k~a~R-~e~a~a~vNa~fl~e~--------~~V~~~~i~fGg~~p~-~i~a~~~~~~~~ 444 (1257)
T KOG0430|consen 387 ASR------------KYFESYKQAPR-RENAIAYVNAAFLAEV--------GKVSSARICFGGIAPD-FIHAKKTEELLL 444 (1257)
T ss_pred CcH------------HHHHHHHhccc-ccchhhhhhHHhhhcc--------ceeeeeeEeecCcCcc-hhhhhhHHHHhh
Confidence 974 27889999999 6899999999887655 3899999999999999 999999999999
Q ss_pred CCCCCHHHHHHHHHHHhccccccCCCCCHHHHHHHHHHHHHHHHHHhhhhhccccccccCCCCCCCCccccccccccccc
Q 000669 482 GKLLSFDVLYEAIILLRDTVVAEVGTPNPAYRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDSKVQQYYDLS 561 (1362)
Q Consensus 482 Gk~~~~~~l~~a~~~l~~~~~p~~d~~s~~YR~~la~~L~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (1362)
||.|+++.+++|+..+..++.|..+.++.+||+.||.+||+|||+.+.+..+.. +++.+|
T Consensus 445 gk~~~~~ll~~a~~lL~~~l~~~~p~~~~~yR~~La~sfffKF~l~~~~~~~~~-~~~~~g------------------- 504 (1257)
T KOG0430|consen 445 GKPWEEELLEDAFGLLQSDLVPDEPGGMPEYRKKLALGFFFKFLLKVAHKVKNG-NKFITG------------------- 504 (1257)
T ss_pred cccccHHHHHHHHHhhhhhccCCCCCCcHHHHHHHHHHHHHHHHHHHhhhcccc-CCccCC-------------------
Confidence 999999999999999999999988889999999999999999999999877421 222222
Q ss_pred ccccCCccCCccccccccCCCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCC
Q 000669 562 DKNKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIP 641 (1362)
Q Consensus 562 ~~~~~~~~~~~~~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~ 641 (1362)
.....+|+.++.|.+++..+.++||+|+.++.+..|+||||.|+|||+.+++.||++||.|+++||+|+|||+|+|+++
T Consensus 505 -~~~~~~~~ls~~Q~~~~~q~~~pVG~pi~~~~a~~qaSGEAvY~dDip~~~n~lh~aFV~St~p~A~I~sID~seAl~~ 583 (1257)
T KOG0430|consen 505 -GSLLARPLLSGGQQFETTQEHYPVGRPVEKLEALIQASGEATYVDDIPTPPNTLHAAFVLSTKPHAKILSIDASEALKL 583 (1257)
T ss_pred -CccccccccccceeecCCCCCCcCcchhhhhhhhhhcccceEEecCCCCCCCeeEEEEEEcccCCcEEeeecchhhcCC
Confidence 1234567777777788777799999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEcCCCCCCC-CCcccccCCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHH
Q 000669 642 CGVIALLTFKDIPEGG-ENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEE 720 (1362)
Q Consensus 642 pGVv~vvt~~Dip~~g-~n~~~~~~~~~~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~ 720 (1362)
|||+++++++|+|..+ .+++....+.|+++||+|+|+++|||||+|||+|.+.|++||++|+|+| ++|+|+++++++
T Consensus 584 ~GVv~~~~akDiPg~n~~~i~~~~~~~de~lFA~~~v~~~GQ~ig~ivAdt~~~A~rAA~lVkv~Y--~~l~p~I~t~e~ 661 (1257)
T KOG0430|consen 584 PGVVAFFSAKDIPGNNMKNIGNMFFPEDEELFATDVVTCVGQPIGVIVADTHELAKRAAKLVKVEY--EELPPPILPSED 661 (1257)
T ss_pred CceEEEEecccCCCCCccccccccCCCccceeecceeEEcCcEEEEEEeCCHHHHHHhhhceEEEe--ccCCCceecHHH
Confidence 9999999999999422 1233233457999999999999999999999999999999999999999 779888999999
Q ss_pred HHhcCCCcccCCCccccccCchhhhh--hccccceEEEEEEeCcccCCCCCCCcEEEEECCCCcEEEEeCCCChHHHHHH
Q 000669 721 AVEQSSLFEIFPHWYPKQVGDITKGM--DEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHAT 798 (1362)
Q Consensus 721 Al~~~~~~~~~~~~~~~~~Gd~~~a~--~~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~ 798 (1362)
|++..++++.++ ....+++.+.+ .++|.+ +|++.+++.|+|||||||+++|+|++| +|+||+|||||..+|..
T Consensus 662 Ai~~~s~~~~~~---~~~~~~~~~~~~~~~~d~i-~~Ge~~mG~QeHFYmEtQttl~vP~e~-el~v~~STQ~~~~tQ~~ 736 (1257)
T KOG0430|consen 662 AVKDKSLSETEP---RLRKGDVGKSFQLEECDKI-LEGELDMGGQEHFYMEPQTTLVVPFEG-ELQVYSSTQWPDFTQSV 736 (1257)
T ss_pred HHhhhcccCCCc---cccccCcccccccccccee-EEEEEEecceeEEEeccceeEEeecCC-eEEEEEcCcCcHHHHHH
Confidence 999988766333 34555555555 566874 999999999999999999999999977 89999999999999999
Q ss_pred HHHHhCCCCccEEEEEccCCCCCCCccCcccccccchhhhhhhhhHHHHHHHHHHhcCCCEEEEeCHHHHHhhcCCCCcE
Q 000669 799 ISRCLGIPQHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPM 878 (1362)
Q Consensus 799 vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gRPVkl~~tReed~~~~~~R~~~ 878 (1362)
||++||||.|||+|+++|+|||||||.++..+ +|++|||+|+|++||||++++|++||.++|+|||+
T Consensus 737 VA~~Lgipa~~V~v~trRvGGGFGGK~trs~~-------------VA~a~ALaA~Kl~RPvr~~l~r~~dM~itG~Rhp~ 803 (1257)
T KOG0430|consen 737 VAHVLGLPANKVQVKTRRLGGGFGGKETRSNP-------------VAAAAALAAYKLNRPVRFVLSRESDMIITGKRHPF 803 (1257)
T ss_pred HHHHhCCCccceEEEEEeeccccccccccccH-------------HHHHHHHHHHHhCCCEEEEecchhhhhhcCCccce
Confidence 99999999999999999999999999999888 99999999999999999999999999999999999
Q ss_pred EEEEEEeeCCCCcEEEEEEEEEecCCCCCCCCchhhHHhhccCCCCcCCcEEEEEEEeecCCCCccccCCCChhHHHHHH
Q 000669 879 KISYSVGFKSNGKITALQLNILIDAGMYPDISPVMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIA 958 (1362)
Q Consensus 879 ~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~ 958 (1362)
..+|++||++||||+|+++++|.|+|+..|.|+++.+++++++++|+|||+|+++++|+||.|+++||||||.||++++.
T Consensus 804 ~~~Ykvgf~~~GkI~aL~~~~~~naG~s~d~S~~~~~~~~~~~n~Y~~~~~r~~G~~ckTN~pSnTa~Rg~G~pQG~~i~ 883 (1257)
T KOG0430|consen 804 HGKYKVGFKSDGKILALDLEFYENAGWSKDESPSVLRAMFHSDNVYEIGDVRFDGYVCKTNLPSNTAFRGPGSPQGILIT 883 (1257)
T ss_pred EEeEEEEEccCCeEEEEehhhhhccCCCcCcchHHHhhhhhhhheecccceeeeeeEEecCCCCcchhcCCCChhhHHHH
Confidence 99999999999999999999999999999999966699999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHhhCCCCCCccccccCCCCCcccCCHHHHHHHHHHhCCchhHHHHHHHHhhcCCCceeeee
Q 000669 959 EAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGIC 1038 (1362)
Q Consensus 959 E~~md~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGi~ 1038 (1362)
|++|+++|.++|+||.|+|++|++++++.+++. |....+.+++||+++.+.++|++|+.++++||+.|+|+||||+
T Consensus 884 E~iie~VA~~~g~d~eeVR~~N~y~eg~~~~~~----~~~~~~~l~~~w~~~~~sS~y~~Rk~ev~~FN~~N~WrKRGi~ 959 (1257)
T KOG0430|consen 884 ENIIERIAFELGKDPEEVRKINFYVEGSLTYYH----GELQHCTLPQLWPECLVSSKFEKRKSEIEEFNKENRWKKRGLA 959 (1257)
T ss_pred HHHHHHHHHHhCCCHHHHhhhhhhhcccccccC----CCcccCcHHHHHHHHHHhchHHHHHHHHHHhhhcChhhhcCce
Confidence 999999999999999999999999988876432 5556679999999999999999999999999999999999999
Q ss_pred eeeeEeecccCC-CcEEEEEcCCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCCccCCC
Q 000669 1039 RVPIVHEMFVKS-SPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGG 1117 (1362)
Q Consensus 1039 ~a~~~~~~~~~~-~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~ 1117 (1362)
++|++|++++.. ..|+|.||.||||.|.|||+|||||+||||+|+||++||| |++.|+|.++||+.+||++
T Consensus 960 ~vp~~f~i~~~~~~~a~V~Iy~DGSV~v~hgGiEmGQGL~TK~~Qvaa~~l~i--------p~~~v~v~~tsT~~v~na~ 1031 (1257)
T KOG0430|consen 960 MVPMKFGISFTGQAPALVHIYTDGTVVVTHGGIEMGQGLNTKVAQVAAYALGI--------PLSSVFVSETSTDKVPNAS 1031 (1257)
T ss_pred EeeeecceeccCCCceEEEEEcCCeEEEEECcEEcccchhHHHHHHHHHHhCC--------cccceEEeecccccccCCC
Confidence 999999999875 9999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCcccccccchHHHHHHHHHHHHHHHHHHHHHhhhccCCCCHHHHHHHHhhcCceeEEEEEecCCCCCCcceeeEEE---
Q 000669 1118 TTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQAHLQSVNLSASSLYVPDSTSIHYLNYGAA--- 1194 (1362)
Q Consensus 1118 ~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~w~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~a~--- 1194 (1362)
.|+||.+++++|.||+.||++|.+||+|++.+. ...+|++++.+||.+.++|+++.+|++.++++.|++||++
T Consensus 1032 ~Ta~S~~Sd~~g~AV~~~C~~l~~RL~Pv~~k~----~~~tw~~~i~~AY~q~V~LsAs~~~~~~g~~~~Y~~yG~a~sE 1107 (1257)
T KOG0430|consen 1032 PTAASVSSDMYGAAVLDACETINARLEPVKSKH----NFNTWEELIQAAYGQSINLSASDWYKPEGDMFPYLTYGAAASE 1107 (1257)
T ss_pred ccccccccccccHHHHHHHHHHHHhhhhhhhhc----CCccHHHHHHHHhhCccceeeeccccCCCCcccceeccceeEE
Confidence 999999999999999999999999999999864 3479999999999999999999999998889999999987
Q ss_pred EEEEccCCcEEEEEEEEEEecCCCCChhhhhhhhhchhHhhHHHHhhccceeCCCCccccCCCCCCCCCCCCCCCCccEE
Q 000669 1195 VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNV 1274 (1362)
Q Consensus 1195 VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~al~Ee~~~d~~G~~l~~~~~~Y~iP~~~diP~~~~v 1274 (1362)
||||++||.++|+|+|+++|||.++||++|+|||||+|+||+|++++||+.||++|.++|+++|+||||++.|||.+|+|
T Consensus 1108 VEID~LTG~~~ilRtDIv~D~G~SLNPaIDIGQIEGAFvQGlG~~t~Eel~~~~~G~l~t~gt~~YKiP~~~dIP~~FrV 1187 (1257)
T KOG0430|consen 1108 VEIDTLTGDTEVLRVDILYDCGESLNPAIDIGQIEGAFVQGLGLVTLEELIYDPEGSLLTNGTWTYKIPGAKDIPKDFRV 1187 (1257)
T ss_pred EEEEEecCcceEEEEEEeeecccccCcccccchhhhHHHhchhhhhhhhheeCCCceEeecCCCcccCCCcccCchheEe
Confidence 99999999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred EEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhcccccCCCCCcceeccCCCCChHHHHHHcCCChHHHH
Q 000669 1275 EILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKELCGLDSVERY 1354 (1362)
Q Consensus 1275 ~l~~~~~~p~g~~gsKgvGE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~tpe~i~~a~~~~~~~~~ 1354 (1362)
.++...+|+.++|+||++||||++++++|++||++||.+||. . ||.++.|+|||+|+++|+++..+.+
T Consensus 1188 ~LL~~~pn~~~v~sSKA~GEPPl~La~sv~fAi~~Ai~aAR~-~-----------~f~L~~PaTpe~i~~~c~~~~~~~~ 1255 (1257)
T KOG0430|consen 1188 ELLNKNPNKAGVMSSKATGEPPLFLAASVFFAIRQAIKSARK-D-----------WFRLEAPATPERIRLACGDEFSEFK 1255 (1257)
T ss_pred eeccCCCCccceeeccccCCChHHHHHHHHHHHHHHHHHHhh-c-----------cccCCCCCCHHHHHHhhcchhhhhc
Confidence 999667899999999999999999999999999999999995 1 7889999999999999999765544
No 3
>PLN02906 xanthine dehydrogenase
Probab=100.00 E-value=1.3e-254 Score=2489.42 Aligned_cols=1241 Identities=34% Similarity=0.537 Sum_probs=1100.7
Q ss_pred chHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCCCc
Q 000669 9 TLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGF 88 (1362)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~~ 88 (1362)
+.|||.+||+ |+|||||+||++|+||||||+|+++++.+|++.+++|||||+|++++||++|+|||||++.++.|
T Consensus 1 ~~~ll~~LR~-----~~l~g~k~gC~~g~CGaCtv~~~~~~~~~~~~~~~~v~sC~~~~~~~~g~~i~Tvegl~~~~~~~ 75 (1319)
T PLN02906 1 HQTLLEYLRD-----LGLTGTKLGCGEGGCGACTVMVSHYDRKTGKCVHYAVNACLAPLYSVEGMHVITVEGIGNRRDGL 75 (1319)
T ss_pred CCcHHHHHHh-----CCCCCCCCCcCCCCCCCeEEEECCccccCCccCCeEehhhHHHHHHhCCCEEEecCCCCCCCCCC
Confidence 3689999995 67779999999999999999999999888999999999999999999999999999999645789
Q ss_pred cHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHHhhc
Q 000669 89 HPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFAAD 168 (1362)
Q Consensus 89 h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~~~~ 168 (1362)
||||++|+++|++|||||||||||+|++||+++ .+.| |++||+++|+|||||||||+||++|+++++.+
T Consensus 76 ~~vq~a~~~~~~~QCG~CtpG~vm~~~~ll~~~----~~~~-------~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~ 144 (1319)
T PLN02906 76 HPVQEALASMHGSQCGFCTPGFIMSMYALLRSS----KTPP-------TEEQIEECLAGNLCRCTGYRPILDAFRVFAKT 144 (1319)
T ss_pred CHHHHHHHHcCCCcCCCCchHHHHHHHHHHHhC----CCCC-------CHHHHHHHhcCCcccCCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999642 1344 59999999999999999999999999999877
Q ss_pred cc----------ccccCCCcccCCC-C-C-CC--------------C----CCCCCCCCCCCCCCCcCCchhhccccccc
Q 000669 169 VD----------IEDLGFNSFWGKG-E-S-KE--------------V----KPSRLPPCKRNGDIFTFPQFRKKENKSWM 217 (1362)
Q Consensus 169 ~~----------~~~~~~~~~~~~~-~-~-~~--------------~----~~~~~~~~~~~~~~~~fp~~l~~~~~~~~ 217 (1362)
.+ +++++ .||+.. . + +. + ..+++++|+++|++ +||++|.......+
T Consensus 145 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~f~~~l~~~~~~~~ 221 (1319)
T PLN02906 145 DDALYTGVSSLSLQDGE--PICPSTGKPCSCGSKTTSAAGTCKSDRFQPISYSEIDGSWYTEKEL-IFPPELLLRKLTPL 221 (1319)
T ss_pred ccccCCcccchhhhhcc--ccccccCcccccccccccccccccccccccccccccccccCccccc-cCCHHHhhCCCcce
Confidence 42 12222 334321 0 0 00 0 01456788888875 89999864434445
Q ss_pred cccC--CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCccccc-cccc-CCCCeeEeCCCCCCCcceeecCCeEEecc
Q 000669 218 LLDV--KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGY-YKEV-EHYDKYIDIRYIPELSMIRRDETGIEIGA 293 (1362)
Q Consensus 218 ~~~~--~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA 293 (1362)
.+.+ +++|++|+||+||+++|++ .+++++|||||||++ ++.+ ..++++|||++|+||+.|+.++++|+|||
T Consensus 222 ~~~~~~~~~~~~P~tl~ea~~ll~~-----~~~a~ivAGGTdl~~~~~~~~~~~~~lIdi~~I~eL~~I~~~~~~l~IGA 296 (1319)
T PLN02906 222 KLLGNGGLTWYRPTSLQHLLELKAE-----YPDAKLVVGNTEVGIEMRFKNAQYPVLISPTHVPELNAIKVKDDGLEIGA 296 (1319)
T ss_pred eecCCCCceEECcCCHHHHHHHHHh-----CCCCEEEEcCchhHHHhhhccCCCCeEEECCCChhhhcEEecCCEEEEec
Confidence 5643 7899999999999999995 578999999999988 5443 67899999999999999999999999999
Q ss_pred cccHHHHHHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCC
Q 000669 294 TVTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQ 373 (1362)
Q Consensus 294 ~vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~ 373 (1362)
+|||++|++++...+++.+....+.+|.|++++++|||+||||+||||||||+++|+ ||++|+|+||||+|+|.+.+
T Consensus 297 ~vT~~el~~~l~~~i~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asP~---sD~~p~LlAl~A~v~l~s~~ 373 (1319)
T PLN02906 297 AVRLSELQNLFRKVVKERPAHETSACKAFIEQLKWFAGTQIRNVASIGGNICTASPI---SDLNPLWMAAGATFVIISCD 373 (1319)
T ss_pred CCcHHHHHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCHhhcCceechhhhccCCCc---hhHHHHHHHcCcEEEEEcCC
Confidence 999999999876654444344456799999999999999999999999999999999 99999999999999999988
Q ss_pred c-eEEEehhhhhcC---CCCCCCceEEEEEecCCCCCCCCcccccccceeeeeeeccCCCCCccceeEEEEEEEEccCCC
Q 000669 374 K-CEKFMLEEFLER---PPLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKN 449 (1362)
Q Consensus 374 g-~R~vpl~dF~~~---~~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~ 449 (1362)
| .|+||++|||.+ +.|+++|||++|+||.+.. ..++.+||+++| +++|||+||+|+.++++..+
T Consensus 374 g~~R~vpl~dFf~g~~kt~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~dia~V~~A~~v~l~~~~- 441 (1319)
T PLN02906 374 GDIRSVPASDFFLGYRKVDLKPDEILLSVFLPWTRP----------FEYVKEFKQAHR-RDDDIAIVNAGMRVKLEEKD- 441 (1319)
T ss_pred CCeEEEEHHHhcCccccccCCCCceEEEEEccCCCC----------CccEEEEEEcCc-cccchhheeeEEEEEEecCC-
Confidence 6 899999999974 6899999999999997654 355678999999 69999999999999996210
Q ss_pred CCCceeeeeEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHhccccccCCC--CCHHHHHHHHHHHHHHHHHH
Q 000669 450 GDRIMVNNCQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVVAEVGT--PNPAYRSSLAVGFLFEFFSS 527 (1362)
Q Consensus 450 ~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~~~p~~d~--~s~~YR~~la~~L~~r~l~~ 527 (1362)
++++|+++||+||||+++ |+|++++|++|.|++|+++++++|++.+.+++.|.+|. +|++||++|+.+|++||+++
T Consensus 442 -~~~~i~~aria~Ggva~~-p~ra~~~E~~L~G~~~~~~~i~~A~~~l~~~~~p~~d~~~~sa~YR~~la~~ll~r~~~~ 519 (1319)
T PLN02906 442 -GEWIVSDASIAYGGVAPL-SVSARKTEEFLIGKPWNKETLQDALKVLQKDILIKEDAPGGMVEFRKSLALSFFFKFFLW 519 (1319)
T ss_pred -CCceEeEEEEEEeccCCc-eecHHHHHHHhcCCCCCHHHHHHHHHHHHhccCCCcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 112799999999999999 99999999999999999999999999999999988774 79999999999999999999
Q ss_pred hhhhhccccccccCCCCCCCCcccccccccccccccccCCccCCccccccccCCCCCCCCCcccccchhhhccccccccc
Q 000669 528 LTETNVEISRSSLCGYGNDFSLKDSKVQQYYDLSDKNKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVD 607 (1362)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~ 607 (1362)
+.+++....+.+ . . +... ..++....++|+|++.|.||..+++++|||+++|+|+..||||+++|++
T Consensus 520 ~~~~~~~~~~~~----~---~-----~~~~-~~~~~~~~~~~~~~~~q~~~~~~~~~~vGk~~~r~d~~~kvtG~a~Y~~ 586 (1319)
T PLN02906 520 VSHQLEADGSTI----E---T-----FPES-HLSAAQPFPRPSSVGMQDYETVKQGTAVGQPEVHLSAELQVTGEAEYAD 586 (1319)
T ss_pred Hhhhcccccccc----c---c-----CChh-hccccccccCCCCccceecccccccccCCCCccCcchhhhcceeEEecc
Confidence 997762100000 0 0 1111 1233456789999999999987899999999999999999999999999
Q ss_pred cCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCC-cccccCCCCcccccCCceeecCCeEEE
Q 000669 608 DIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGEN-IGCKSMFGPEPLFANELTRGAGQAVAF 686 (1362)
Q Consensus 608 Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n-~~~~~~~~~~~~~a~~~V~y~GqpVa~ 686 (1362)
|++.+|||||+++||||++||+|++||+|+|++||||++|+|++|+| +.| ++. ...++|+|++++|+|+|||||+
T Consensus 587 Di~~~~g~L~a~~vrSp~aharI~sID~s~A~~~pGV~~v~t~~Dip--~~~~~g~--~~~~~~~la~~~V~y~GqpVa~ 662 (1319)
T PLN02906 587 DIPMPPNTLHAALVLSTKPHARILSIDDSEAKSSPGFAGIFLAKDVP--GDNMIGP--VVHDEELFATDVVTCVGQVIGV 662 (1319)
T ss_pred CCcCCCCCEEEEEEecCcCceEEeecchHHHhCCCCeEEEEchhhCC--CCCCCCC--CCCCeeEecCcEEEEcCCeEEE
Confidence 99855899999999999999999999999999999999999999998 433 332 2358899999999999999999
Q ss_pred EEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHHHHhcCCCcccCCCccccccCchhhhhhc--cccceEEEEEEeCccc
Q 000669 687 VVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDE--ADQKILSAEIKLSSQY 764 (1362)
Q Consensus 687 VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~~~~~~~~~~~~~Gd~~~a~~~--a~~vvve~~y~~~~q~ 764 (1362)
|||+|+++|++|+++|+|+| |+| |+++|+++|++++++|+.. ......||++++|++ |+++ ||++|++++|+
T Consensus 663 VvA~t~~~A~~Aa~~V~Vey--e~l-p~v~~~~~Al~~~a~~~~~--~~~~~~Gdv~~af~~a~a~~v-ve~~~~~~~~~ 736 (1319)
T PLN02906 663 VVADTQENAKAAARKVKVEY--EEL-PAILSIEEAIEAGSFHPNT--ERRLEKGDVELCFASGQCDRI-IEGEVQMGGQE 736 (1319)
T ss_pred EEECCHHHHHHHhCCCEEEE--ecC-CccCCHHHHhcCCCcccCC--CceeecCCHHHHhhccCCceE-EEEEEEECCcc
Confidence 99999999999999999999 889 8999999999998876422 123578999999998 6885 99999999999
Q ss_pred CCCCCCCcEEEEECCC-CcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEccCCCCCCCccCcccccccchhhhhhhhh
Q 000669 765 YFYMETQTALAVPDED-NCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKS 843 (1362)
Q Consensus 765 H~~mEp~~avA~~~~d-g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~~~~~~~~~~ 843 (1362)
|+||||++|+|+|++| |+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+...+
T Consensus 737 H~~mEp~~~~A~~~~~~g~l~v~~sTQ~p~~~r~~vA~~Lgip~~kVrV~~~~vGGgFGgK~~~~~~------------- 803 (1319)
T PLN02906 737 HFYLEPNSSLVWTSDSGNEVHMISSTQAPQKHQKYVAHVLGLPMSKVVCKTKRIGGGFGGKETRSAF------------- 803 (1319)
T ss_pred ccccCCCeEEEEEeCCCCEEEEEECCcCHHHHHHHHHHHhCCChHHeEEEeCCcccCccccccccch-------------
Confidence 9999999999999977 58999999999999999999999999999999999999999999986544
Q ss_pred HHHHHHHHHHhcCCCEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCCCc-hhhHHhhccCC
Q 000669 844 VATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDISP-VMPMIMLGTLK 922 (1362)
Q Consensus 844 ~~~~aAlaA~~~gRPVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~~~~~~~~~ 922 (1362)
++++||++|+++||||||+|||+|+|+++++|||+.++||+|+|+||+|++++++++.|+|+|.+++. ++...+.+..+
T Consensus 804 ~~~~aAlaA~~~gRPVkl~~sReE~~~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~ 883 (1319)
T PLN02906 804 IAAAAAVPAYLLNRPVKLTLDRDVDMMITGQRHAFLGKYKVGFTNEGKILALDLEIYNNGGNSLDLSGAVLERAMFHSDN 883 (1319)
T ss_pred HHHHHHHHHHHhCCCEEEEecHHHHhhhcCCccceEEEEEEEECCCCCEEEEEEEEEecCcccCCcchHHHHHHHHhcCC
Confidence 56788999999999999999999999999999999999999999999999999999999999998875 55666678889
Q ss_pred CCcCCcEEEEEEEeecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCCCCCccccccCCCCCcccC-
Q 000669 923 KYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEY- 1001 (1362)
Q Consensus 923 ~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~- 1001 (1362)
+|+|||++++++.|+||++|+|||||||.+|++|++|++||++|++|||||+|||++|++++++.+ +.|+.+++
T Consensus 884 ~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl~~~g~~~-----~~g~~~~~~ 958 (1319)
T PLN02906 884 VYEIPNVRIVGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAVELNKSPEEIREMNFQGEGSVT-----HYGQVLQHC 958 (1319)
T ss_pred CccCcceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCCC-----cCCccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999877653 34666544
Q ss_pred CHHHHHHHHHHhCCchhHHHHHHHHhhcCCCceeeeeeeeeEeecccC-----CCcEEEEEcCCCcEEEEeCCcccCCCh
Q 000669 1002 TIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVK-----SSPGKVSILSDGSIVVEVGGIELGQGL 1076 (1362)
Q Consensus 1002 ~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGi~~a~~~~~~~~~-----~~~a~v~l~~DGsv~v~~g~~e~GQG~ 1076 (1362)
.+++||+++++.++|++|++.+++||+.++|+|||+|+++..|+.++. +..+.|+|++||+|+|.+|++|||||+
T Consensus 959 ~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~krGiG~a~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~G~~e~GQG~ 1038 (1319)
T PLN02906 959 TLPQLWDELKVSCDFLKRREEVDEFNAKNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1038 (1319)
T ss_pred CHHHHHHHHHHhCCHHHHHHHHHHHhhcCCCceEEEEEEecccccccccccCCccceEEEEcCCceEEEEECCccCCCCh
Confidence 899999999999999999888889999899999999999998887653 678999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 000669 1077 WTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLERMGS 1156 (1362)
Q Consensus 1077 ~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~ 1156 (1362)
+|+++||||++||| |+|+|+|..+||+.+||+++|+|||+|+++|+||++||++||+||.++++++ ..
T Consensus 1039 ~T~~aQiaAe~LGi--------p~d~V~v~~~DT~~~p~~~gT~aSr~t~~~G~Av~~Aa~~l~~rl~~~a~~~----~~ 1106 (1319)
T PLN02906 1039 HTKVAQVAASAFNI--------PLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEQIKARMEPVASKL----NF 1106 (1319)
T ss_pred HHHHHHHHHHHHCC--------CHHHEEEEccCCCCCCCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHHHc----CC
Confidence 99999999999999 9999999999999999999999999999999999999999999999997654 35
Q ss_pred CCHHHHHHHHhhcCceeEEEEEecCCC----------CCCcceeeEEE---EEEEccCCcEEEEEEEEEEecCCCCChhh
Q 000669 1157 VNWETLIQQAHLQSVNLSASSLYVPDS----------TSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAV 1223 (1362)
Q Consensus 1157 ~~w~~~~~~a~~~~~~l~~~~~~~~~~----------~~~~~~~~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~ 1223 (1362)
++|.+++..++..+.++.+.++|.++. .+++|++|+++ ||||++||+++|+|+++++|||++|||.+
T Consensus 1107 ~~~~~l~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~vlr~~~v~D~G~~iNP~~ 1186 (1319)
T PLN02906 1107 SSFAELVTACYFQRIDLSAHGFYITPDIGFDWKTGKGNPFNYFTYGAAFAEVEIDTLTGDFHTRRVDIVMDLGYSINPAI 1186 (1319)
T ss_pred CCHHHHHHHhhccCCCeEEEEEecCCCcccccccccCCCccceeeeEEEEEEEEecCCCcEEEEEEEEEEecCccCCHHH
Confidence 889999988876677799998886532 23456778877 99999999999999999999999999999
Q ss_pred hhhhhhchhHhhHHHHhhccceeCCC-------CccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCCCccCCCC
Q 000669 1224 DLGQIEGAFVQGIGFFMLEEYPTNSD-------GLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPP 1296 (1362)
Q Consensus 1224 ~~gQieGg~~~GlG~al~Ee~~~d~~-------G~~l~~~~~~Y~iP~~~diP~~~~v~l~~~~~~p~g~~gsKgvGE~~ 1296 (1362)
++|||||||+||||++|+||+.||++ |+++|+||++|+||++.|||.+|+|++++..++|.||||+||+||+|
T Consensus 1187 ~~GQieGg~vqGiG~aL~Ee~~~d~~~~~~~~~G~llt~~~~~Y~iPt~~DiP~~~~v~~~~~~~~~~~p~gaKGvGE~~ 1266 (1319)
T PLN02906 1187 DIGQIEGAFVQGLGWVALEELKWGDAAHKWIRPGSLFTCGPGTYKIPSVNDIPFKFNVSLLKGAPNPKAIHSSKAVGEPP 1266 (1319)
T ss_pred HhHhhHHHHHHHHHHHhcCceEEcccccccCCCCccccCCCcccCCCCccccCCceEEEEEeCCCCCCCCCcCccCCccc
Confidence 99999999999999999999999976 99999999999999999999559999997456889999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHhcccccCCCCCcceeccCCCCChHHHHHHcCCCh
Q 000669 1297 LLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKELCGLDS 1350 (1362)
Q Consensus 1297 ~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~tpe~i~~a~~~~~ 1350 (1362)
++++++|++||+|||++||++. |..++|++++|+|||+|+++|+++.
T Consensus 1267 ~~~~aav~~AI~~Ai~~A~~~~-------g~~~~~~~~~P~Tperi~~a~~~~~ 1313 (1319)
T PLN02906 1267 FFLAASVFFAIKDAIKAARAEV-------GLHGWFPLDTPATPERIRMACGDEI 1313 (1319)
T ss_pred cccchHHHHHHHHHHHHHHhhc-------CCCCcccCCCCCCHHHHHHHccchh
Confidence 9999999999999999999865 5556788999999999999999964
No 4
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=100.00 E-value=2.8e-253 Score=2473.62 Aligned_cols=1246 Identities=31% Similarity=0.498 Sum_probs=1092.7
Q ss_pred CCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
.|+.|||.+||+++++ ||||+||++|+||||||+|+.+++.++++++++|||||+|+++++|++|+|||||++.++
T Consensus 18 ~~~~~ll~~LR~~~~l----~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~v~TvEgl~~~~~ 93 (1330)
T TIGR02969 18 DPETMLLPYLRKKLRL----TGTKYGCGGGGCGACTVMISRYNPSTKSIRHHPVNACLTPICSLYGAAVTTVEGIGSTRT 93 (1330)
T ss_pred CCCCcHHHHHHhhcCC----CCCCCCcCCCCCCCcEEEECCccccccccCCcEEehhHHHHHHhCCCEEEecCCcCCCCC
Confidence 6899999999996555 599999999999999999999999889999999999999999999999999999996456
Q ss_pred CccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHHh
Q 000669 87 GFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166 (1362)
Q Consensus 87 ~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~~ 166 (1362)
.|||||+||+++|++|||||||||||++++||++ +|+| |++||+++|+|||||||||+||++|+++++
T Consensus 94 ~l~pvq~a~~~~~~~QCGfCtpG~vm~~~~ll~~-----~~~p-------~~~~i~~~l~gnlCRCtgY~~i~~a~~~~~ 161 (1330)
T TIGR02969 94 RLHPVQERIAKCHGTQCGFCTPGMVMSMYALLRN-----HPEP-------TLDQLTDALGGNLCRCTGYRPIIDACKTFC 161 (1330)
T ss_pred CCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHc-----CCCC-------CHHHHHHHhcCCcccCCCCHHHHHHHHHHh
Confidence 8999999999999999999999999999999954 4666 599999999999999999999999999999
Q ss_pred hccc--ccccCCCccc-C--CC--CC--------CCCCCCCCCCCCCCCCCCcCCchhhccc---ccc-ccccC-CceEE
Q 000669 167 ADVD--IEDLGFNSFW-G--KG--ES--------KEVKPSRLPPCKRNGDIFTFPQFRKKEN---KSW-MLLDV-KGSWH 226 (1362)
Q Consensus 167 ~~~~--~~~~~~~~~~-~--~~--~~--------~~~~~~~~~~~~~~~~~~~fp~~l~~~~---~~~-~~~~~-~~~~~ 226 (1362)
.+.. +++++.+||+ + ++ ++ .....+.+.++++.++ .+||++|.... ... +.+.+ +.+|+
T Consensus 162 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~fp~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (1330)
T TIGR02969 162 KTSGCCQSKENGVCCLDQGINGLPEFEEGDETSPELFSEEEFLPLDPTQE-LIFPPELMRMAEKQPQRTRVFYSERMMWI 240 (1330)
T ss_pred hccCCchhccccCccccccccccccccccccccccccchhcccCCCcccc-ccCChhHhhcccccccceeeecCCCceEE
Confidence 7743 2333324554 1 11 00 0111234556777765 48999987531 122 44554 57999
Q ss_pred ecCCHHHHHHHHHcccCCCCCCeEEEecCccccc-cccc-CCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHHHH
Q 000669 227 NPISVQELQNLLESHEDNNQTSIKLVVGNTGMGY-YKEV-EHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESL 304 (1362)
Q Consensus 227 ~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~~ 304 (1362)
+|+||+||+++|++ ++++++|||||||++ ++.+ ..++.+|||++|+||+.|+.++++|+|||+|||++|++++
T Consensus 241 ~P~tl~ea~~ll~~-----~~~a~lvAGGTdl~~~~k~~~~~~~~lIdi~~I~EL~~i~~~~~~l~IGA~vT~~el~~~l 315 (1330)
T TIGR02969 241 SPVTLKELLEAKFK-----YPQAPVVMGNTSVGPEVKFKGVFHPVIISPDRIEELSVVNHTGDGLTLGAGLSLAQVKDIL 315 (1330)
T ss_pred CCCCHHHHHHHHHh-----CCCCEEEecCcchHHHhhhccCCCCeEEECCCChhhhcEEEcCCEEEEeccccHHHHHHHH
Confidence 99999999999995 579999999999998 5553 5678999999999999999999999999999999999987
Q ss_pred HHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCceEEEehhhhh
Q 000669 305 KEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFL 384 (1362)
Q Consensus 305 ~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g~R~vpl~dF~ 384 (1362)
...+.+.+....+++|.|++++++|||+||||+||||||||++||+ ||++|+|+||||+|+|.+.+|+|+||++|||
T Consensus 316 ~~~i~~~p~~~~~~~p~L~~a~~~ias~qIRN~gTlGGNi~~asP~---sD~~p~LlAl~A~v~l~s~~g~R~vpl~dff 392 (1330)
T TIGR02969 316 ADVVQKLPEETTQTYRALLKHLGTLAGSQIRNMASLGGHIISRHLD---SDLNPLLAVGNCTLNLLSKEGKRQIPLSEQF 392 (1330)
T ss_pred HHhhhcCchhhhHHHHHHHHHHHHhCChhhcccccchhhcccCCCc---hhHHHHHHHcCcEEEEecCCceEEEehHHhh
Confidence 6654434444456899999999999999999999999999999999 9999999999999999999999999999988
Q ss_pred c----CCCCCCCceEEEEEecCCCCCCCCcccccccceeeeeeeccCCCCCccceeEEEEEEEEccCCCCCCceeeeeEE
Q 000669 385 E----RPPLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQL 460 (1362)
Q Consensus 385 ~----~~~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ri 460 (1362)
. ++.|+++|||++|.||.+.. ...+.+||+++| +++|||+||+|+.+++++ ++++|+++||
T Consensus 393 ~~~~~~t~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~dia~V~~A~~v~l~~----~~~~i~~ari 457 (1330)
T TIGR02969 393 LSKCPDADLKPQEILVSVNIPYSRK----------WEFVSAFRQAQR-QQNALAIVNSGMRVFFGE----GDGIIRELSI 457 (1330)
T ss_pred hcccccccCCCCceEEEEEecCCCC----------ccceeEEEEcCC-ccccHHHhhheEEEEEEc----CCCEEeEEEE
Confidence 3 46899999999999997643 345668999999 699999999999999941 1469999999
Q ss_pred EEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHhccccc-cCCC-CCHHHHHHHHHHHHHHHHHHhhhhhcccccc
Q 000669 461 AFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVVA-EVGT-PNPAYRSSLAVGFLFEFFSSLTETNVEISRS 538 (1362)
Q Consensus 461 a~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~~~p-~~d~-~s~~YR~~la~~L~~r~l~~~~~~~~~~~~~ 538 (1362)
+||||+++ |+|++++|++|.||+|+++++++|++++.+++.| .+|. +|++||++|+.+||+||++++..++....+.
T Consensus 458 a~Ggvap~-p~ra~~~E~~L~Gk~~~~~~~~~A~~~l~~~~~p~~~d~r~sa~YRr~la~~ll~kf~~~~~~~~~~~~~~ 536 (1330)
T TIGR02969 458 SYGGVGPT-TICAKNSCQKLIGRPWNEEMLDTACRLILDEVSLAGSAPGGKVEFKRTLIISFLFKFYLEVSQILKRMDPG 536 (1330)
T ss_pred EEEcCcCc-eecHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhhcccccc
Confidence 99999999 9999999999999999999999999999999986 5545 8999999999999999999998776311110
Q ss_pred ccCCCCCCCCcccccccccccccccccCCccCCccccccccC--CCC--CCCCCcccccchhhhccccccccccCCCCCC
Q 000669 539 SLCGYGNDFSLKDSKVQQYYDLSDKNKVPTLLSSAKQVVQLS--REY--YPVGGPITKSGAALQASGEAVYVDDIPSPTN 614 (1362)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~--~~~--~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pg 614 (1362)
. .|..++ . ..+.....++|++.+.|.|+.. .+. ++|||+++|+|+.+||||+++|++|++.+||
T Consensus 537 ~------~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGk~v~r~d~~~kvtG~a~Y~~Di~~~pg 604 (1330)
T TIGR02969 537 H------YPSLAD-----K-YESALEDLHSKHHWSTLKHQNVDSMQLPQDPIGHPIMHLSGVKHATGEAIYCDDMPAVDQ 604 (1330)
T ss_pred c------cccCCh-----h-hccccccccCCCCccccceecccccccccCcCCCCCcChhhHhhccccccccCCCCCCCC
Confidence 0 011111 1 1233456788999999988641 222 8899999999999999999999999974589
Q ss_pred cEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCcccccCCCCcccccCCceeecCCeEEEEEeCCHHH
Q 000669 615 CLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKN 694 (1362)
Q Consensus 615 mL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~~~~~~~~~a~~~V~y~GqpVa~VvAet~~~ 694 (1362)
|||+++||||++||||++||+|+|++||||++|+|++|+| +.|. ++++++|++++|+|+|||||+|||+|+++
T Consensus 605 mL~a~~vrSp~ahArI~sID~s~A~~~pGV~~V~t~~Dvp--~~~~-----~~~~~~la~~~Vr~~Gqpva~VvAet~~~ 677 (1330)
T TIGR02969 605 ELFLTFVTSSRAHAKIVSIDLSEALSLPGVVDIITAEHLQ--DANT-----FGTEKLLATDKVHCVGQLVCAVIADSEVQ 677 (1330)
T ss_pred CEEEEEEecCCCceEEEeeeHHHHhcCCCeEEEEeHHHCC--CCCC-----CCCeeecCCCeEEEcCCeEEEEEECCHHH
Confidence 9999999999999999999999999999999999999998 3331 24789999999999999999999999999
Q ss_pred HHHhcccCeEEEcccCCCCCcCCHHHHHhcCCCcccCCCccccccCchhhhhhccccceEEEEEEeCcccCCCCCCCcEE
Q 000669 695 ANRAANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTAL 774 (1362)
Q Consensus 695 A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~~~~~~~~~~~~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~av 774 (1362)
|++|+++|+|+| |+|+|+++|+++|+++++++... .....||++++|++|+++ ||++|++++|+|+||||++|+
T Consensus 678 A~~Aa~~V~VeY--e~l~~~v~d~~~Al~~~a~~~~~---~~~~~Gdv~~af~~a~~v-ve~~y~~~~~~H~~mEp~~~~ 751 (1330)
T TIGR02969 678 AKQAAKHVKIVY--RDLEPLILTIEEAIQHKSFFEPE---RKLEYGNVDEAFKVVDQI-LEGEIHMGGQEHFYMETQSML 751 (1330)
T ss_pred HHHHhcCCEEEE--ecCCCCcCCHHHHhcCCCEeccc---ccccCCchhhhhccCCEE-EEEEEEECCEeecccCCCEEE
Confidence 999999999999 88866779999999988754421 135789999999999985 999999999999999999999
Q ss_pred EEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEccCCCCCCCccCcccccccchhhhhhhhhHHHHHHHHHH
Q 000669 775 AVPDE-DNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAY 853 (1362)
Q Consensus 775 A~~~~-dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~ 853 (1362)
|+|++ ||+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+.... .++.||++|+
T Consensus 752 A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~-------------~~~~aA~aA~ 818 (1330)
T TIGR02969 752 VVPKGEDQEMDVYVSTQFPKYIQDIVAATLKLPVNKVMCHVRRVGGAFGGKVGKTSI-------------MAAITAFAAN 818 (1330)
T ss_pred EEEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHeEEEeCCcccCcccccccccH-------------HHHHHHHHHH
Confidence 99984 578999999999999999999999999999999999999999999875423 4678999999
Q ss_pred hcCCCEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCCCc-hhhHHhhccCCCCcCCcEEEE
Q 000669 854 KLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFD 932 (1362)
Q Consensus 854 ~~gRPVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~ 932 (1362)
++||||||+|||+|+|..+++|||+.++||+|+|+||+|++++++++.|+|+|.+.+. ++...+.+..++|+|||++++
T Consensus 819 ~~gRPVk~~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~ 898 (1330)
T TIGR02969 819 KHGRAVRCTLERGEDMLITGGRHPYLGKYKAGFMNDGRIVALDVEHYSNGGSSLDESLWVIEMGLLKMDNAYKFPNLRCR 898 (1330)
T ss_pred HhCCCEEEEecHHHHhhhcCCcCceEEEEEEEECCCCCEEEEEEEEEEecccccCcchHHHHHHHHhcCCCccCCcEEEE
Confidence 9999999999999999999999999999999999999999999999999999998775 555666778899999999999
Q ss_pred EEEeecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCCCCCccccccCCCCCccc-CCHHHHHHHHH
Q 000669 933 IKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAE-YTIPLMWDKLA 1011 (1362)
Q Consensus 933 ~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~-~~~~~~l~~~~ 1011 (1362)
++.|+||+||+|||||||.+|++|++|++||++|++|||||+|||++|++++++.. || |++++ .++++||++++
T Consensus 899 ~~~v~TN~~~~~a~RG~G~~q~~fa~E~~mD~lA~~lg~DP~e~R~~N~~~~gd~~-p~----~~~~~~~~~~~~l~~~~ 973 (1330)
T TIGR02969 899 GWACRTNLPSNTAFRGFGFPQAGLITEACITEVAAKCGLSPEKVRTINMYKEIDQT-PY----KQEINAKNLFQCWRECM 973 (1330)
T ss_pred EEEEECCCCCCCccCCCchHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCcccC-CC----CcccCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877653 33 44433 38999999999
Q ss_pred HhCCchhHHHHHHHHhhcCCCceeeeeeeeeEeecccC-----CCcEEEEEcCCCcEEEEeCCcccCCChhHHHHHHHHH
Q 000669 1012 VSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVK-----SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAF 1086 (1362)
Q Consensus 1012 ~~~~~~~r~~~~~~~n~~~~~~krGi~~a~~~~~~~~~-----~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~ 1086 (1362)
+.++|++|++.++.||+.++|++||+|++++.|++++. ++.+.|+|++||+|+|.+|++|||||++|+++||||+
T Consensus 974 ~~~~~~~r~~~~~~~~~~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe 1053 (1330)
T TIGR02969 974 AKSSYSERKVAVEKFNAENYWKKRGLAVIPLKFPVGLGSVAMGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVVSR 1053 (1330)
T ss_pred HhcCHHHHHHHHHHHhccCCCeEEEEEEEEEEeccccccCCCCCccEEEEEcCCceEEEEECCcCcCCChHHHHHHHHHH
Confidence 99999999888888998889999999999999987653 5789999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Q 000669 1087 ALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQA 1166 (1362)
Q Consensus 1087 ~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~w~~~~~~a 1166 (1362)
+||| |+|+|+|..+||+.+||+++|+|||+|+++|+||++||++|++||.+++++. ...+|.+++..+
T Consensus 1054 ~LGi--------p~e~V~v~~~DT~~~p~~~gt~gSr~t~~~G~Av~~A~~~l~~rl~~~aa~~----~~~~~~~~~~~~ 1121 (1330)
T TIGR02969 1054 ELKM--------PMSNVHLRGTSTETVPNTNASGGSVVADLNGLAVKDACQTLLKRLEPIISKN----PQGTWKDWAQTA 1121 (1330)
T ss_pred HhCC--------CHHHEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CCCCHHHHHHhh
Confidence 9999 9999999999999999999999999999999999999999999999998642 246799988666
Q ss_pred hhcCceeEEEEEecCCC----------CCCcceeeEEE---EEEEccCCcEEEEEEEEEEecCCCCChhhhhhhhhchhH
Q 000669 1167 HLQSVNLSASSLYVPDS----------TSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFV 1233 (1362)
Q Consensus 1167 ~~~~~~l~~~~~~~~~~----------~~~~~~~~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~ 1233 (1362)
+..+++|.+.++|.... .+++|++|||+ ||||++||+++|+|+++++|||++|||.+++|||||||+
T Consensus 1122 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVEVD~~TG~v~vlr~~~v~D~G~~INP~~~~GQieGg~v 1201 (1330)
T TIGR02969 1122 FDQSISLSAVGYFRGYESNINWEKGEGHPFEYFVYGAACSEVEIDCLTGDHKNIRTDIVMDVGHSINPALDIGQVEGAFI 1201 (1330)
T ss_pred ccCCCceEEEEEecCCcccccccCcCCCCccccceeeEEEEEEEecCCCCEEEEEEEEEEeCCcccCHHHHhHhHHHHHH
Confidence 65567888888774211 23446778877 999999999999999999999999999999999999999
Q ss_pred hhHHHHhhccceeCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHH
Q 000669 1234 QGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIRE 1313 (1362)
Q Consensus 1234 ~GlG~al~Ee~~~d~~G~~l~~~~~~Y~iP~~~diP~~~~v~l~~~~~~p~g~~gsKgvGE~~~~~~~av~~Ai~nAi~~ 1313 (1362)
||||++|+||+.||++|+++|+||++|++|++.|||.+|+|++++++++|.||||+||+||+|+++++++++||+|||++
T Consensus 1202 qGiG~al~Ee~~yd~~G~~lt~~~~dY~iPt~~DiP~~~~v~~~~~~~~~~~p~GaKGvGE~~~~~a~~v~~AI~nAI~~ 1281 (1330)
T TIGR02969 1202 QGMGLYTIEELSYSPQGILYSRGPNQYKIPAICDIPTELHISFLPPSEHSNTLYSSKGLGESGVFLGCSVFFAIHDAVRA 1281 (1330)
T ss_pred HHHHHHHcceeEECCCCCCCCCCcccccCCchhhcCCCEEEEEEeCCCCCCCCCccccCcccccccCccHHHHHHHHHHH
Confidence 99999999999999899999999999999999999955999999866788999999999999999888899999999999
Q ss_pred HHHhcccccCCCCCcceeccCCCCChHHHHHHcCCChHHHHH
Q 000669 1314 ARKQLLTWSDLDRSDITFNLEVPATMPVVKELCGLDSVERYL 1355 (1362)
Q Consensus 1314 A~~~~~~~~~~~g~~~~~~~~~P~tpe~i~~a~~~~~~~~~~ 1355 (1362)
|+++. |.+++|.+++|+|||+||++|..+..+.+.
T Consensus 1282 A~g~~-------g~~~~~~~~~P~Tperv~~al~~~~~~~~~ 1316 (1330)
T TIGR02969 1282 ARQER-------GLSGPWKLTSPLTPEKIRMACEDKFTKMIP 1316 (1330)
T ss_pred HHhhc-------CCCcCccCCCCCCHHHHHHHhhhhHHHhhh
Confidence 99764 555577899999999999999997544443
No 5
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=100.00 E-value=3.2e-172 Score=1648.30 Aligned_cols=709 Identities=23% Similarity=0.309 Sum_probs=612.3
Q ss_pred CCCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCC-----CCC
Q 000669 584 YPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPE-----GGE 658 (1362)
Q Consensus 584 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~-----~g~ 658 (1362)
+.|||+++|+|++.||||+++|++|+. +|||||++++|||++||||+|||+|+|++||||++|+|++|+|. .+.
T Consensus 170 ~~VGk~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~vvrSp~ahArI~sID~s~A~a~pGV~~Vvt~~Dvp~~~~~~~~~ 248 (956)
T PRK09800 170 EVIGKHYPKTDAAKMVQAKPCYVEDRV-TADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPDIYYTPGGQ 248 (956)
T ss_pred ccCCCCCCCcChHhhCcccccccccCC-CCCCEEEEEeecCCCcEEEeeeEHHHHHhCCCeEEEEcHHHCCcccccccCc
Confidence 458999999999999999999999996 78999999999999999999999999999999999999999982 111
Q ss_pred CcccccCCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHHHHhcCCC--ccc------
Q 000669 659 NIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSL--FEI------ 730 (1362)
Q Consensus 659 n~~~~~~~~~~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~--~~~------ 730 (1362)
.++. ...+.+++++++|||+|||||+|||+|+++|++|+++|+|+| |+| |+++|+++|++++++ |+.
T Consensus 249 ~~~~--~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~V~Vey--e~L-p~v~d~~~Al~~~a~~vh~~~~~~~~ 323 (956)
T PRK09800 249 SAPE--PSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEY--EVL-KPVMSIDEAMAEDAPVVHDEPVVYVA 323 (956)
T ss_pred CCCC--CCCCCccccCCeEEEcCCeEEEEEECCHHHHHHHhcCCceEE--EeC-CccCCHHHHhcCCCceeccccccccc
Confidence 1110 112234456999999999999999999999999999999999 889 999999999998874 321
Q ss_pred ------------------------------CCCc---cccccCchhhhhhccccceEEEEEEeCcccCCCCCCCcEEEEE
Q 000669 731 ------------------------------FPHW---YPKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVP 777 (1362)
Q Consensus 731 ------------------------------~~~~---~~~~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~ 777 (1362)
+.|+ .....||++++|++|+++ ||++|++++|+|+||||++|+|+|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af~~a~~v-ve~~y~~~~~~H~~mEp~~aiA~~ 402 (956)
T PRK09800 324 GAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADVI-IERTYNSTQAQQCPTETHICFTRM 402 (956)
T ss_pred ccccccccccccccccccccccccccccCCCCceeeeccccCCCHHHHHhhCCEE-EEEEEEeCCcccccCCCceEEEEE
Confidence 1222 224679999999999985 999999999999999999999999
Q ss_pred CCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEccCCCCCCCccCcccccccchhhhhhhhhHHHHHHHHHHhcCC
Q 000669 778 DEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCR 857 (1362)
Q Consensus 778 ~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gR 857 (1362)
++ |+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+.. ....||++|+++||
T Consensus 403 d~-~~l~v~~stQ~p~~~r~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~---------------~e~~aA~aA~~~gr 466 (956)
T PRK09800 403 DG-DRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDIL---------------LEEVCAWATCVTGR 466 (956)
T ss_pred eC-CeeEEEECCCcHHHHHHHHHHHHCCCHHHeEEEcCCCCccCcCccccc---------------HHHHHHHHHHHhCC
Confidence 85 489999999999999999999999999999999999999999998532 33557899999999
Q ss_pred CEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCCCc-hhhHHhhccCCCCcCCcEEEEEEEe
Q 000669 858 PVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVC 936 (1362)
Q Consensus 858 PVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v 936 (1362)
||||+|||+|+|.++.+|||+.+++|+|+|+||+|++++++++.|+|+|.+++. +......+..++|+|||++++.+.|
T Consensus 467 PVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v 546 (956)
T PRK09800 467 PVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNVDFQVTTY 546 (956)
T ss_pred CEEEEeeHHHHhhCcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcCCCcchHHHHHHHhhcCcCcccceEEEEEEEE
Confidence 999999999999999999999999999999999999999999999999998765 3333444566899999999999999
Q ss_pred ecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCCCCCccccc------cCCCCCc-c-cCCHHHHHH
Q 000669 937 RTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFY------ESSAGEH-A-EYTIPLMWD 1008 (1362)
Q Consensus 937 ~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~R~~Nl~~~~~~~~~~------~~~~g~~-~-~~~~~~~l~ 1008 (1362)
+||++|+|+|||||.+|+.|++|++||++|++|||||+|||+||+.++|+....+ ..+.+.+ + ++.+++||+
T Consensus 547 ~TN~~p~ga~RG~G~pq~~fa~Es~mDelA~~lg~DPve~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~~~s~~~~~~L~ 626 (956)
T PRK09800 547 YSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEILR 626 (956)
T ss_pred ECCCCCCCCcCCCCcchHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccCccccCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999877643110 0011222 2 347999999
Q ss_pred HHHHhCCchhHHHHHHHHhhcCCCceeeeeeeeeEeeccc---CCCcEEEEEcCCCcEEEEeCCcccCCChhHHHHHHHH
Q 000669 1009 KLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFV---KSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAA 1085 (1362)
Q Consensus 1009 ~~~~~~~~~~r~~~~~~~n~~~~~~krGi~~a~~~~~~~~---~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA 1085 (1362)
++++.++|+++++ .+++|+ ||+|+++..++.+. .++.+.|+|++||+|+|++|++|||||++|+++||+|
T Consensus 627 ~~~e~~~w~~~~~------~~g~~~-~G~Gia~~~~~~g~~~~~~~~a~v~l~~dGsv~v~~g~~e~GqG~~T~~~QiaA 699 (956)
T PRK09800 627 QGREMIQWSSPKP------QNGDWH-IGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAA 699 (956)
T ss_pred HHHHhcCcchhhh------hcCCCe-eEEEEEEEEEcccCCCCCCceEEEEECCCceEEEEECCCCCCccHHHHHHHHHH
Confidence 9999999987532 235564 35555555443332 2578999999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHHhhhc------------
Q 000669 1086 FALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLER------------ 1153 (1362)
Q Consensus 1086 ~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~------------ 1153 (1362)
++||+ |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||..++++++..
T Consensus 700 e~LGi--------p~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~~g~ 771 (956)
T PRK09800 700 EVLHC--------PPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQLATPGV 771 (956)
T ss_pred HHHCC--------CceeEEEEeCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEecCCE
Confidence 99999 9999999999999999999999999999999999999999999999887765421
Q ss_pred ----cCCCCHHHHHHHHhhc--CceeEEEEEecCCCCCCcceeeEEEEEEEccCCcEEEEEEEEEEecCCCCChhhhhhh
Q 000669 1154 ----MGSVNWETLIQQAHLQ--SVNLSASSLYVPDSTSIHYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNPAVDLGQ 1227 (1362)
Q Consensus 1154 ----~~~~~w~~~~~~a~~~--~~~l~~~~~~~~~~~~~~~~~~~a~VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQ 1227 (1362)
.+.++|.++...++.. ...+.+.++|.++...++|.+..++||||++||+|+|+|+++++|||++|||.+++||
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~aeVeVD~~TG~vkvl~~~~~~D~G~vINP~~v~gQ 851 (956)
T PRK09800 772 VRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQ 851 (956)
T ss_pred EeCCCCcccHHHHHHHHhcCCCCCCeEEEEEecCCCCCcceEEEEEEEEEECCCCcEEEEEEEEEEECCccCCHHHHHHH
Confidence 1246899998766542 2357778877654333344444444999999999999999999999999999999999
Q ss_pred hhchhHhhHHHHhhccceeCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHH
Q 000669 1228 IEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCAT 1307 (1362)
Q Consensus 1228 ieGg~~~GlG~al~Ee~~~d~~G~~l~~~~~~Y~iP~~~diP~~~~v~l~~~~~~p~g~~gsKgvGE~~~~~~~av~~Ai 1307 (1362)
||||++||||++|+||+.||++|+++|+||++|++|++.|+|.+|+++++|++ +|.||||+||+||+++.+ +++||
T Consensus 852 ieGgi~qGiG~AL~Ee~~~d~~G~~~~~~l~~Y~iPt~~DiP~~i~v~~ve~~-~~~~p~GaKgvGE~~~~~---~a~AI 927 (956)
T PRK09800 852 IYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSD-DKVGPFGAKSISEIGVNG---AAPAI 927 (956)
T ss_pred HHHHHHHHHHHHHhCCcEECCCCcCCCCCcccCCCCChhhCCCceEEEEEcCC-CCCCCCCCcccCCCcccc---hHHHH
Confidence 99999999999999999999889999999999999999999944999999864 678999999999999998 56699
Q ss_pred HHHHHHHHHhcccccCCCCCcceeccCCCCChHHHHHHcC
Q 000669 1308 RAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKELCG 1347 (1362)
Q Consensus 1308 ~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~tpe~i~~a~~ 1347 (1362)
+|||++|++ ++++++|+|||+|++++.
T Consensus 928 anAI~~A~G-------------~r~~~lP~tpe~vl~al~ 954 (956)
T PRK09800 928 ATAIHDACG-------------IWLREWHFTPEKILTALE 954 (956)
T ss_pred HHHHHHHhC-------------cCcccCCCCHHHHHHHHh
Confidence 999999995 557899999999999875
No 6
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=100.00 E-value=3.6e-170 Score=1631.68 Aligned_cols=709 Identities=24% Similarity=0.320 Sum_probs=610.9
Q ss_pred CCCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCC-----CCC
Q 000669 584 YPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPE-----GGE 658 (1362)
Q Consensus 584 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~-----~g~ 658 (1362)
+.|||+++|+|+..||||+++|++|+. +|||||++++|||++||||+|||+|+|++||||++|+|++|+|. .+.
T Consensus 166 ~~iGk~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~v~rSP~ahArI~sID~s~A~a~pGV~~Vvt~~D~p~~~~~~~~~ 244 (951)
T TIGR03313 166 TIIGKNCPKIDAAKMVQAKPCYVEDRV-PADACVIKMLRSPHPHAWITHLDVSKAEALPGVVHVITHLNCPDIYYTPGGQ 244 (951)
T ss_pred ccCCCCCcCcChHhhCccCccccccCC-CCCCEEEEEEecCCCcEEEEeeEHHHHHhCCCeEEEEeHHHCCccccCCCCc
Confidence 458999999999999999999999996 78999999999999999999999999999999999999999982 111
Q ss_pred CcccccCCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHHHHhcCCC--cccC-----
Q 000669 659 NIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSL--FEIF----- 731 (1362)
Q Consensus 659 n~~~~~~~~~~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~--~~~~----- 731 (1362)
.++. ...++++|++++|||+|||||+|||+|+|+|++|+++|+||| |+| |+++|+++|++++++ |+..
T Consensus 245 ~~~~--~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~I~Vey--e~L-p~v~d~~~Al~~~ap~ih~~~~~~~~ 319 (951)
T TIGR03313 245 SAPE--PSPLDRRMFGQKMRHVGDRVAAVVAESEEIALHALKLIEVEY--DVL-TPVMSIDEAMAAEAPIVHDEPIVYGA 319 (951)
T ss_pred cCCC--CCCCcccccCCeEEEcCCEEEEEEECCHHHHHHHhcCCeeEE--EeC-CccCCHHHHhcCCCCeeccccccccc
Confidence 1110 112344568999999999999999999999999999999999 889 999999999998885 3210
Q ss_pred -------------------------------CCc---cccccCchhhhhhccccceEEEEEEeCcccCCCCCCCcEEEEE
Q 000669 732 -------------------------------PHW---YPKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVP 777 (1362)
Q Consensus 732 -------------------------------~~~---~~~~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~ 777 (1362)
.|+ .....||++++|++|+++ ||++|++++|+|++|||++|+|+|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af~~A~~v-ve~~y~~~~~~H~~mEp~~aiA~~ 398 (951)
T TIGR03313 320 GAPDDLEEQNANADPRGEHMIINFPIGSRPRKNIAASVHGHIGDLNKGFAEADVI-IERTYESTQAQQCPTETHICFTYM 398 (951)
T ss_pred cccccccccccccccccccccccccccccCCCceeeeccccCCCHHHHHhcCCEE-EEEEEEECCEeeecCCCceEEEEE
Confidence 121 124679999999999985 999999999999999999999999
Q ss_pred CCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEccCCCCCCCccCcccccccchhhhhhhhhHHHHHHHHHHhcCC
Q 000669 778 DEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCR 857 (1362)
Q Consensus 778 ~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gR 857 (1362)
++ ++|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+.. +...||++|+++||
T Consensus 399 d~-~~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~---------------~e~~aA~aA~~~Gr 462 (951)
T TIGR03313 399 DG-ERLVIHASTQVPWHVRRQVARIVGMKQHKVHVIKERVGGGFGSKQDIL---------------LEEVCAWATWVTGR 462 (951)
T ss_pred cC-CeEEEEECCcCHHHHHHHHHHHHCCCHHHeEEEcCCCCcCcCCccccc---------------HHHHHHHHHHHhCC
Confidence 85 589999999999999999999999999999999999999999997532 33457899999999
Q ss_pred CEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCCCchhh-HHhhccCCCCcCCcEEEEEEEe
Q 000669 858 PVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDISPVMP-MIMLGTLKKYDWGALHFDIKVC 936 (1362)
Q Consensus 858 PVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~~~~-~~~~~~~~~Y~ipn~~~~~~~v 936 (1362)
||||+|||+|+|++..+||++.+++|+|+|+||+|+||+++++.|+|+|.+++..+. .......++|+|||++++.+.|
T Consensus 463 PVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~A~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v 542 (951)
T TIGR03313 463 PVYFRYTREEEFICNTSRHVAKVTVKLGAKKDGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLPLYPCDNVDFRVTTY 542 (951)
T ss_pred CEEEEeeHHHHhhccCCCCCeEEEEEEEECCCCcEEEEEEEEEEcCccCcccchHHhhhhhhhcCcCccCCeEEEEEEEE
Confidence 999999999999999999999999999999999999999999999999987665333 2334456889999999999999
Q ss_pred ecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCCCCCcccccc------CCCCCc-c-cCCHHHHHH
Q 000669 937 RTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYE------SSAGEH-A-EYTIPLMWD 1008 (1362)
Q Consensus 937 ~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~------~~~g~~-~-~~~~~~~l~ 1008 (1362)
+||++|.|||||||.+|+.|++|++||++|++|||||+|||+||+.++|+...... .+.+.+ . ...+.+||+
T Consensus 543 ~TN~~p~ga~Rg~G~~q~~fa~Es~mDelA~~lG~DP~e~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~~~s~~~~~~l~ 622 (951)
T TIGR03313 543 YSNICPTGAYQGYGAPKGNFALTMAMAELAEELGIDQLEMIETNRVHEGQELKILGAIGEGKMPTSVPKAASCALEEILR 622 (951)
T ss_pred ECCCCCCCCcCCCCcccHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccccccCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999998876432100 011111 2 237999999
Q ss_pred HHHHhCCchhHHHHHHHHhhcCCCceeeeeeeeeEeeccc---CCCcEEEEEcCCCcEEEEeCCcccCCChhHHHHHHHH
Q 000669 1009 KLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFV---KSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAA 1085 (1362)
Q Consensus 1009 ~~~~~~~~~~r~~~~~~~n~~~~~~krGi~~a~~~~~~~~---~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA 1085 (1362)
+++++++|+++.+ ++++|+ ||+|++...+..+. .++.+.|+|++||+|+|++|++|||||++|+++||+|
T Consensus 623 ~~~~~~~w~~~~~------~~g~~~-~G~Gia~~~~~~g~~~~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~~QiaA 695 (951)
T TIGR03313 623 QGRELIEWDSPKQ------AKGDWK-IGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSGGADIGTGLDTVVSKLTA 695 (951)
T ss_pred HHHHhcCccchhh------hccCce-eeeEEEEEEecccCCCCCCccEEEEEcCCceEEEEECCCCCCccHHHHHHHHHH
Confidence 9999999987642 235664 35555554443332 2578999999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHHhhhc------------
Q 000669 1086 FALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLER------------ 1153 (1362)
Q Consensus 1086 ~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~------------ 1153 (1362)
++||+ |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||..++++++..
T Consensus 696 e~LGv--------p~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~~g~ 767 (951)
T TIGR03313 696 EVLHC--------PMDDVHVISGDTDHALFDKGAYASSGTCFSGNAAKRAAENLREKILFHGAEMLGEPVADVDLAAPGL 767 (951)
T ss_pred HHHCC--------CHHhEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEecCCE
Confidence 99999 9999999999999999999999999999999999999999999998887665321
Q ss_pred ----cCCCCHHHHHHHHhhc--CceeEEEEEecCCCCCCcceeeEEEEEEEccCCcEEEEEEEEEEecCCCCChhhhhhh
Q 000669 1154 ----MGSVNWETLIQQAHLQ--SVNLSASSLYVPDSTSIHYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNPAVDLGQ 1227 (1362)
Q Consensus 1154 ----~~~~~w~~~~~~a~~~--~~~l~~~~~~~~~~~~~~~~~~~a~VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQ 1227 (1362)
.+.++|.+++..++.. ...+.+.+.|.++...++|.++.++||||++||++||+|+++++|||++|||.+++||
T Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVeVD~~TG~vkv~r~~~~~D~G~~INP~~v~gQ 847 (951)
T TIGR03313 768 VRGKTGEVSYFDIAHKAETGTGFGQLVGTGSYITSEFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQ 847 (951)
T ss_pred EeCCCCcccHHHHHHHHhccCCCCCeEEEEEecCCCCCccceeEEEEEEEECCCCcEEEEEEEEEEECCcccCHHHHHHH
Confidence 1236899997665431 2246677777553333445555555999999999999999999999999999999999
Q ss_pred hhchhHhhHHHHhhccceeCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHH
Q 000669 1228 IEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCAT 1307 (1362)
Q Consensus 1228 ieGg~~~GlG~al~Ee~~~d~~G~~l~~~~~~Y~iP~~~diP~~~~v~l~~~~~~p~g~~gsKgvGE~~~~~~~av~~Ai 1307 (1362)
||||++||||++|+|++.||++|+++|.||++|++|++.|+|.+|+++++|++ +|.||||+||+||+++++ +++||
T Consensus 848 ieGg~~qGiG~AL~Ee~~~d~~G~~~~~~l~~Y~iPt~~D~P~~~~v~~ve~~-~~~~p~GaKGiGE~~~~~---~apAI 923 (951)
T TIGR03313 848 IYGATMRAIGHSMTEEIVYDDNGIPLTRDLKSYGAPKIGDIPRDFRAVLVPSD-DKVGPYGAKSISEIGVNG---AAPAI 923 (951)
T ss_pred HHHHHHHHHHHHHhCCcEECCCCcCCCCChhhCCCCChHhCCCceEEEEEcCC-CCCCCCCCcccCCCcccc---hHHHH
Confidence 99999999999999999999899999999999999999999944999999865 678999999999999998 56699
Q ss_pred HHHHHHHHHhcccccCCCCCcceeccCCCCChHHHHHHcC
Q 000669 1308 RAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKELCG 1347 (1362)
Q Consensus 1308 ~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~tpe~i~~a~~ 1347 (1362)
+|||++|++ ++++++|+|||+|+++++
T Consensus 924 anAI~dA~G-------------~r~~~lP~tPe~vl~al~ 950 (951)
T TIGR03313 924 ATAIHDACG-------------VWLRDWHFTPEKILKGLN 950 (951)
T ss_pred HHHHHHHhC-------------cccccCCCCHHHHHHHhh
Confidence 999999995 567899999999999875
No 7
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=100.00 E-value=2.5e-164 Score=1570.13 Aligned_cols=670 Identities=25% Similarity=0.364 Sum_probs=575.0
Q ss_pred CCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCcccccC
Q 000669 586 VGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSM 665 (1362)
Q Consensus 586 vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~~ 665 (1362)
||++++|+|+.+||||+++|++|++ +|||||++++|||++||+|++||+|+|++||||++|+|++|+|. ..+++. .
T Consensus 162 iG~~~~R~d~~~kvtG~~~Y~~Di~-~pgmL~a~~vrSp~ahA~I~~ID~s~A~a~PGV~aVvt~~Dip~-~~~~g~--~ 237 (848)
T TIGR03311 162 LGENFPRVDAVPKVLGEGVYVDDMQ-IEGMLYGSALRSKYPRALVKSIDITVALKHPGVVAVLTAKDIPG-NRKIGH--I 237 (848)
T ss_pred CCCccCCcChhhhCcccccccccCC-CCCCEEEEEEeCCCCCEEEEeeEHHHHHhCCCcEEEEeHHHCCC-ccCCCC--C
Confidence 6788899999999999999999997 68999999999999999999999999999999999999999982 122322 2
Q ss_pred CCCcc-ccc-CCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHHHHhcCCC--cccCCCcc---ccc
Q 000669 666 FGPEP-LFA-NELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSL--FEIFPHWY---PKQ 738 (1362)
Q Consensus 666 ~~~~~-~~a-~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~--~~~~~~~~---~~~ 738 (1362)
..++| +|+ +++|||+|||||+|||+|+++|++|+++|+|+| ++| |+++|+++|++++++ |+ .+|+. ...
T Consensus 238 ~~~~~~~~a~~~~Vry~Ge~VA~VvA~t~~~A~~A~~~V~Vey--e~l-p~v~d~~~A~~~~a~~i~~-~~Nv~~~~~~~ 313 (848)
T TIGR03311 238 FKDWPALIAVGEITRYVGDAVALVAAKSKEALREALNLIKVDY--EEL-PPLTSPEEALAEGAPAIHP-KGNILSEEHVV 313 (848)
T ss_pred CCCccccccCCCEEEEcCCeEEEEEECCHHHHHHHhCCCcEEE--ecC-CCcCCHHHHhcCCCCeECC-CCCCcceeeec
Confidence 23444 344 589999999999999999999999999999999 888 899999999998873 43 33432 357
Q ss_pred cCchhhhhhccccceEEEEEEeCcccCCCCCCCcEEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEccCC
Q 000669 739 VGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLG 818 (1362)
Q Consensus 739 ~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vG 818 (1362)
.||++++|++|+++ ||++|++++|+|+||||++|+|+|++ |+|+||+|||+|+.+|..||++||||++||||+++++|
T Consensus 314 ~Gdv~~af~~A~~v-ve~~y~~~~~~h~~mEp~~~vA~~~~-~~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vG 391 (848)
T TIGR03311 314 RGDAEEALENSAYV-VTNHYSTPFTEHAFLEPESALAVPEG-DGVIIYTSTQGVYDEQRELASLLGLPKEKIRVINKFVG 391 (848)
T ss_pred CCCHHHHhhcCCeE-EEEEEEECCEeeeecCCceEEEEEeC-CeEEEEECCcCHHHHHHHHHHHhCCChHHEEEEeCCCC
Confidence 89999999999985 99999999999999999999999985 56999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccccchhhhhhhhhHHHHHHHHHHhcCCCEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCcEEEEEEE
Q 000669 819 GGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLN 898 (1362)
Q Consensus 819 GgFG~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gRPVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~ 898 (1362)
||||+|.... ....||++|+++||||||+|||+|+|..+.+||++.+++|+|+|+||+|++++++
T Consensus 392 GgFG~K~~~~---------------~~~~aA~~A~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~ 456 (848)
T TIGR03311 392 GGFGGKEDMS---------------VQHHAALLAWATKRPVKVTLTRKESILVHPKRHAMEMTFTTGCDEAGNLTAMKAD 456 (848)
T ss_pred CcCCcccccc---------------HHHHHHHHHHHhCCCEEEEechHHhhhccCCCCceEEEEEEEECCCCcEEEEEEE
Confidence 9999998753 3456888999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCc-hhhHHhhccCCCCcCCcEEEEEEEeecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHH
Q 000669 899 ILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVR 977 (1362)
Q Consensus 899 ~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~R 977 (1362)
++.|+|+|.+++. ++.....+..++|+|||++++++.|+||++|.|+|||||.+|++|++|++||++|++|||||+|||
T Consensus 457 ~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~lg~DP~E~R 536 (848)
T TIGR03311 457 IIADTGAYASLGGPVLQRACTHAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFGVTQSNFAMECNLNLLAEKVGLSPWEIR 536 (848)
T ss_pred EEEccccCCCccHHHHHHHHHhcCCCccCceEEEEEEEEECCCCCCCCccCCChhHHHHHHHHHHHHHHHHhCcCHHHHH
Confidence 9999999998765 445556677899999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCCCCccccccCCCCCccc-C-CHHHHHHHHHHhCCchhHHHHHHHHhhcCCCceeeeeeeeeEeecccC---CCc
Q 000669 978 SINLHTRNSLNLFYESSAGEHAE-Y-TIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVK---SSP 1052 (1362)
Q Consensus 978 ~~Nl~~~~~~~~~~~~~~g~~~~-~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGi~~a~~~~~~~~~---~~~ 1052 (1362)
+||++++++.. ++|+.++ . .+++||+++++. |++ ++++|+++.....|++.. ...
T Consensus 537 ~rN~~~~gd~~-----~~g~~~~~~~~~~~~l~~~~~~--~~~-------------~~~~G~~~~~~~~g~~~~~~~~~~ 596 (848)
T TIGR03311 537 FKNAVEPGDTL-----PNGQVVSEGTAIKETLLAVKEV--YEK-------------SPCAGIACAFKNSGVGVGIPDTGR 596 (848)
T ss_pred HHhCCCCCCcC-----CCCceeCCCchHHHHHHHHHHH--hhh-------------ccCCeEEEEEEEeccccCCCCcce
Confidence 99999887643 4576665 3 589999998874 431 134566654444444432 356
Q ss_pred EEEEEcCCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCcccccccchHHHH
Q 000669 1053 GKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAV 1132 (1362)
Q Consensus 1053 a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av 1132 (1362)
+.++++ ||+|+|.+|++|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|.++|+||
T Consensus 597 ~~~~~~-DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~~gt~aSR~t~~~G~Av 667 (848)
T TIGR03311 597 CNLAVE-DGKVHIRTSAACIGQGLGTVLTQIVCETTGL--------PPEVIVCELPDTALTPDSGTTTASRQSLFTGEAT 667 (848)
T ss_pred EEEEEc-CCEEEEEECCCCcCcCHHHHHHHHHHHHHCC--------CHHHEEEEcCCCCCCCCCCCCchhhHHHHHHHHH
Confidence 777777 9999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCC--CHHHHHHHHhhcCceeEEEEEecCCCCCCcceeeEEE-EEEEccCCcEEEEEE
Q 000669 1133 RLCCNVLVERLSALRGRLLERMGSV--NWETLIQQAHLQSVNLSASSLYVPDSTSIHYLNYGAA-VEVNLLTGETTILRA 1209 (1362)
Q Consensus 1133 ~~Ac~~L~~rl~~~~~~~~~~~~~~--~w~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~a~-VEVD~~TG~v~V~r~ 1209 (1362)
++||++||+||+......+ ..+.. .|.++. ..+.+.+.|.. ..+ .++|+++ |||| +|| +|+|+
T Consensus 668 ~~Aa~~l~~~l~~~~~~~l-~~~~~~~~~~~~~-------~~~~~~~~~~~--~~~-~~~~~~~~~eVd-~tG--~v~r~ 733 (848)
T TIGR03311 668 RRAAAKLKEALRGRTLAEL-EGEEFYGEYHSIT-------DPLNSDKENPV--SHV-GYGYATQVVILD-DAG--KVEKV 733 (848)
T ss_pred HHHHHHHHHHHHhcCHHHc-CCCEEeecccccc-------CcceeeccCCC--Ccc-ccceEEEEEEEC-CCC--eEEEE
Confidence 9999999999974321111 00000 011110 01333333321 111 2346667 9999 999 67899
Q ss_pred EEEEecCCCCChhhhhhhhhchhHhhHHHHhhccceeCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCC
Q 000669 1210 DIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSS 1289 (1362)
Q Consensus 1210 ~~~~D~G~~iNP~~~~gQieGg~~~GlG~al~Ee~~~d~~G~~l~~~~~~Y~iP~~~diP~~~~v~l~~~~~~p~g~~gs 1289 (1362)
++++|||++|||.+++||||||++||||++|+|++.|| +|++++ +|++|++|++.|+|+ |+++++|++ +|.+|||+
T Consensus 734 ~~v~D~G~vINP~~veGQieGG~~qGlG~AL~Ee~~~d-~G~~~~-~~~dY~iPt~~D~P~-i~v~~ve~~-~~~~p~Ga 809 (848)
T TIGR03311 734 VAAYDVGRAINPLNLEGQIEGGIVMGLGYALTEDFPLR-EGIPTA-KFGTLGLFRSTQVPE-IETHLIEKN-GTPLAYGA 809 (848)
T ss_pred EEEEeCCccCCHHHHHHHHHHHHHHHHHHHhcCcEEec-CCeecC-ChhhccCCChhhCCC-eEEEEEeCC-CCCCCCCC
Confidence 99999999999999999999999999999999999997 599886 599999999999995 999999865 68899999
Q ss_pred CccCCCCccchhhHHHHHHHHHHHHHHhcccccCCCCCcceeccCCCCChHHHH
Q 000669 1290 KASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVK 1343 (1362)
Q Consensus 1290 KgvGE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~tpe~i~ 1343 (1362)
||+||+++.+ +++||+|||++|+| ++++++|+|||+|+
T Consensus 810 KGvGE~~~~~---~~~AIanAV~~A~G-------------~r~~~lP~~p~~v~ 847 (848)
T TIGR03311 810 KGVGELATIP---TAPAVAGAYYRFDG-------------KFRLSLPLENTPYT 847 (848)
T ss_pred ccCCCCcccc---hHHHHHHHHHHhHC-------------cCcccCCCCccccc
Confidence 9999999998 66699999999995 67899999999986
No 8
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=100.00 E-value=2.1e-148 Score=1417.08 Aligned_cols=720 Identities=35% Similarity=0.523 Sum_probs=645.7
Q ss_pred CCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCcccccC
Q 000669 586 VGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSM 665 (1362)
Q Consensus 586 vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~~ 665 (1362)
|||+++|+|+..||||+++|++|+..+|||||+++||||++||+|++||+|+|+++|||++|+|++|+| +.|.. ...
T Consensus 1 ~G~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~~iD~s~A~~~pGV~~V~t~~D~p--~~~~~-g~~ 77 (758)
T TIGR02965 1 VGTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVVDVLTAADIP--GENDI-SPI 77 (758)
T ss_pred CCCCccCcchHhhCceeeEcccCCCCCCCCEEEEEEecCCCceEEeecchHHHhcCCCcEEEEEHHHCC--CCCCC-CCC
Confidence 699999999999999999999999546899999999999999999999999999999999999999998 43321 112
Q ss_pred CCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHHHHhcCCCcccCCCccccccCchhhh
Q 000669 666 FGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKG 745 (1362)
Q Consensus 666 ~~~~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~~~~~~~~~~~~~Gd~~~a 745 (1362)
..++|+|++++|||+|||||+|||+|+++|++|+++|+|+| |+| |+++|+++|++++++...+. .....||++++
T Consensus 78 ~~~~~~la~~~Vry~Ge~va~VvA~~~~~A~~A~~~i~V~y--e~l-p~v~d~~~Al~~~a~~~~~~--~~~~~Gd~~~a 152 (758)
T TIGR02965 78 IHDDPLLADGKVEFVGQPIFAVIATSRDAARRAARLAKIEY--EEL-PAVLDIEEALAAGSRFVTPP--LTLERGDAEAA 152 (758)
T ss_pred CCCceeccCCEEEEcCCeEEEEEECCHHHHHHHhhccEEEE--EcC-CccCCHHHHhcCCCCcccCc--ccccCCCHHHH
Confidence 35889999999999999999999999999999999999999 889 89999999999886421111 13578999999
Q ss_pred hhccccceEEEEEEeCcccCCCCCCCcEEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEccCCCCCCCcc
Q 000669 746 MDEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGGGFGGKF 825 (1362)
Q Consensus 746 ~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~ 825 (1362)
|++|+++ ||++|++++|+|++|||++|+|+|+++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.
T Consensus 153 f~~a~~v-ve~~y~~~~~~h~~mEp~~~vA~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~ 231 (758)
T TIGR02965 153 LAAAPHR-LSGEMRIGGQEHFYLEGQIALAVPGEDGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGGKE 231 (758)
T ss_pred HhhCCEE-EEEEEEECCEeEEecCCceEEEEEcCCCCEEEEECCCChHHHHHHHHHHhCCChHHEEEEeCCCccCccccc
Confidence 9999985 999999999999999999999999977789999999999999999999999999999999999999999998
Q ss_pred CcccccccchhhhhhhhhHHHHHHHHHHhcCCCEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCcEEEEEEEEEecCCC
Q 000669 826 LNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGM 905 (1362)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gRPVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga 905 (1362)
....+ .++.||++|+++||||||+|||+|+|.++.+||++.+++|+|+|+||+|++++++++.|+|+
T Consensus 232 ~~~~~-------------~~~~aa~~A~~~grPVk~~~sR~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Ga 298 (758)
T TIGR02965 232 TQANL-------------FACLAAVAARKTGRPVKLRPDRDDDMMITGKRHDFLVDYDVGFDDEGRILGVDIDMAARCGF 298 (758)
T ss_pred cccch-------------HHHHHHHHHHHHCCCEEEEechHHhhhhccCccceEEEEEEEECCCCCEEEEEEEEeecCcc
Confidence 75433 46788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCc-hhhHHhhccCCCCcCCcEEEEEEEeecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCCC
Q 000669 906 YPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTR 984 (1362)
Q Consensus 906 ~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~R~~Nl~~~ 984 (1362)
|.+.+. ++........++|+|||++++++.|+||++|+|+|||||.+|+.|++|++||++|++|||||+|||+||++++
T Consensus 299 y~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~Nl~~~ 378 (758)
T TIGR02965 299 SADLSGPVTDRALFHADNAYFLPDVTITSHPLKTNTQSNTAFRGFGGPQGMVAIERIMDEVARALGKDPLEVRKRNFYGK 378 (758)
T ss_pred cCCcchHHHHHHHHhcCCcccCCceEEEEEEEEcCCCCCccccCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHcCCCC
Confidence 987654 4445556778999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCccccccCCCCCcccC-CHHHHHHHHHHhCCchhHHHHHHHHhhcCCCceeeeeeeeeEeecccC-----CCcEEEEEc
Q 000669 985 NSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVK-----SSPGKVSIL 1058 (1362)
Q Consensus 985 ~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGi~~a~~~~~~~~~-----~~~a~v~l~ 1058 (1362)
++.. .++.|+.+++ .+++||+++++.++|++|++..++||..++|++||+|+++..++.++. ++.+.|+|+
T Consensus 379 g~~~---~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~i~ 455 (758)
T TIGR02965 379 DERN---VTPYHQTVEDNIIHEIIEELEESSDYAARRAAIRAFNAASPVLKKGIALTPVKFGISFTVTHLNQAGALVHVY 455 (758)
T ss_pred CCCC---cCCCceeccCCcHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCceeEEEEeeeeccccccccccCccceEEEEe
Confidence 7542 2345776555 899999999999999998887778888889999999999988887642 578999999
Q ss_pred CCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCcccccccchHHHHHHHHHH
Q 000669 1059 SDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCCNV 1138 (1362)
Q Consensus 1059 ~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~ 1138 (1362)
+||+|+|.+|.+|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|.++|+||++||++
T Consensus 456 ~dG~v~v~~g~~e~GQG~~T~laQIaAe~LGi--------~~d~V~v~~~DT~~~p~~~gT~gSr~t~~~g~Av~~Aa~~ 527 (758)
T TIGR02965 456 TDGSIHLNHGGTEMGQGLNTKVAQVVAEEFQV--------DIDRVKITATDTDKVPNTSATAASSGSDLNGMAAQDAARQ 527 (758)
T ss_pred CCCcEEEEECCCCCCCCHHHHHHHHHHHHhCC--------CHHHEEEEecCccCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc---------------cCCCCHHHHHHHHhhcCceeEEEEEecCCCC----------CCcceeeEE
Q 000669 1139 LVERLSALRGRLLER---------------MGSVNWETLIQQAHLQSVNLSASSLYVPDST----------SIHYLNYGA 1193 (1362)
Q Consensus 1139 L~~rl~~~~~~~~~~---------------~~~~~w~~~~~~a~~~~~~l~~~~~~~~~~~----------~~~~~~~~a 1193 (1362)
||+||++++++++.. ...++|.+++..++..+..|.+.++|.++.. ++++++|++
T Consensus 528 lr~~l~~~Aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~l~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga 607 (758)
T TIGR02965 528 IKERLVAFAAEKWQVPAEDVRFAPNHVRVGEQRVPFAELVQQAYFARVQLSSTGFYKTPKIHWDRAKGRGRPFYYFAYGA 607 (758)
T ss_pred HHHHHHHHHHHHhCCCHHHEEEECCEEEeCCCccCHHHHHHHHhhcCCCcEEEEEEcCCCccccccccCCCCcceeeeeE
Confidence 999999998776421 1247899998877765567888888865321 222455666
Q ss_pred E---EEEEccCCcEEEEEEEEEEecCCCCChhhhhhhhhchhHhhHHHHhhccceeCCCCccccCCCCCCCCCCCCCCCC
Q 000669 1194 A---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPK 1270 (1362)
Q Consensus 1194 ~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~al~Ee~~~d~~G~~l~~~~~~Y~iP~~~diP~ 1270 (1362)
+ ||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||++|+++|+||++|++|++.|||+
T Consensus 608 ~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d~~G~~l~~~~~dY~iPta~DiP~ 687 (758)
T TIGR02965 608 ACSEVSVDTLTGEYKVLRADILHDVGRSLNPAIDIGQVEGGFVQGMGWLTTEELVWDEKGRLRTHAPSTYKIPAASDRPK 687 (758)
T ss_pred EEEEEEEecCCCcEEEEEEEEEEecCCcCCHHHhhhhhhhhhhhhhhHhhccceEECCCcCCcCCCCcCcCCCChhhCCC
Confidence 6 9999999999999999999999999999999999999999999999999999989999999999999999999994
Q ss_pred ccEEEEecC-CCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhcccccCCCCCcceeccCCCCChHHHHHHcCC
Q 000669 1271 QFNVEILNS-GHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKELCGL 1348 (1362)
Q Consensus 1271 ~~~v~l~~~-~~~p~g~~gsKgvGE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~tpe~i~~a~~~ 1348 (1362)
+|+++++|+ +.+|.||||+||+||+++++.+++++||+|||++|++- .-++.+++|+|||+|+++|..
T Consensus 688 ~~~~~~~e~~~~~~~~p~GaKGvGE~~~~~~aav~~AI~nAi~~a~g~----------~~~~~~~lP~tpe~v~~al~~ 756 (758)
T TIGR02965 688 DFNVRLFEWSENREDTIHRSKAVGEPPLMLGISVLFAISDAVASVADY----------RVCPRLDAPATPERVLMAVEA 756 (758)
T ss_pred ccEEEEecCCCCCCCCCcCCcccCccchhhHHHHHHHHHHHHHHhhcc----------CCCCCCCCCCCHHHHHHHHHh
Confidence 499999995 44578999999999999998888999999999999851 112558999999999999864
No 9
>COG4631 XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.1e-146 Score=1237.49 Aligned_cols=722 Identities=35% Similarity=0.511 Sum_probs=668.0
Q ss_pred CCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCccc
Q 000669 583 YYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGC 662 (1362)
Q Consensus 583 ~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~ 662 (1362)
-..||.+.++-.+...|+|.|.|+||++.|+|.||+++-.|+++||||+++|.++.++.|||+.|+|++|+| |.|-.
T Consensus 16 ~~~v~~~~~HeSAhkHV~GtA~YiDD~pepag~LH~~~gls~~aHAri~~mDl~~v~a~PGVv~vlta~DvP--GenDi- 92 (781)
T COG4631 16 RGGVGTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAPGVVDVLTAADVP--GENDI- 92 (781)
T ss_pred CCcccccccccchhhcccceeEEecCCCCcccchhhhccccccchheeeecchHHhhcCCCeEEEEEecCCC--CCCCC-
Confidence 356899999999999999999999999999999999999999999999999999999999999999999999 77741
Q ss_pred ccCCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHHHHhcCCCcccCCCccccccCch
Q 000669 663 KSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDI 742 (1362)
Q Consensus 663 ~~~~~~~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~~~~~~~~~~~~~Gd~ 742 (1362)
.+...|+|+|++++|.|+||||-+|+|+|.++|++|+.+.+||| |+| |+++|+.+|+..+.+.. ++ ...++||.
T Consensus 93 sp~~hddpl~a~gkVef~GQ~vfaV~A~s~e~ARraA~~a~ieY--e~l-p~~~di~~a~a~~~~v~-~p--~~l~rGD~ 166 (781)
T COG4631 93 SPVKHDDPLLADGKVEFHGQPVFAVIAESREAARRAARLAKIEY--EDL-PPVTDIDEAIAAGRLVT-PP--LTLKRGDA 166 (781)
T ss_pred CcccCCCccccCceEEEccceEEEEeehhHHHHHHHHHhhhccc--ccC-CccCCHHHHhhcccccC-Cc--hhhcccch
Confidence 22367999999999999999999999999999999999999999 999 99999999998886543 22 25789999
Q ss_pred hhhhhccccceEEEEEEeCcccCCCCCCCcEEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEccCCCCCC
Q 000669 743 TKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGGGFG 822 (1362)
Q Consensus 743 ~~a~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG 822 (1362)
+.+|+.|.+. ++++++++.|+|||+|.|.++|.|+|||.++||+|||.|..+|..+|++||+|.|.|.|.++|+|||||
T Consensus 167 ~a~~~~Ap~r-~~G~~~iGGQehFYLEgqia~a~p~Ed~~v~v~~STQhPtE~Q~~vahvLGvpsn~VtV~~rRMGGGFG 245 (781)
T COG4631 167 AAALAAAPHR-LQGEMRIGGQEHFYLEGQIALAVPGEDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGFG 245 (781)
T ss_pred hhhhhhCchh-heeeEEEcCeeeEEEeeeeeEeccCCCCCEEEEecCCCcHHHHHHHHHHhCCCcceEEEEEEeecCCcC
Confidence 9999999996 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccccchhhhhhhhhHHHHHHHHHHhcCCCEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCcEEEEEEEEEec
Q 000669 823 GKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILID 902 (1362)
Q Consensus 823 ~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gRPVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d 902 (1362)
||++.... +++.||++|+|++||||+..+|.|||.++||||++...|++|||.||+|++++..+..+
T Consensus 246 GKEtQ~~~-------------fAa~aA~aA~k~~r~vk~RpdRdeDm~~TGKRHdF~v~y~vGfDdeGri~~v~~~~aar 312 (781)
T COG4631 246 GKETQANQ-------------FAALAALAAKKTGRPVKIRPDRDEDMTATGKRHDFHVDYEVGFDDEGRILGVDATLAAR 312 (781)
T ss_pred cccccchH-------------HHHHHHHHHHHhCCceeecCCcchhhhhccCcCceEEEeeeccCCCCcEEEeeeehhhc
Confidence 99987766 78999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCc-hhhHHhhccCCCCcCCcEEEEEEEeecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhC
Q 000669 903 AGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINL 981 (1362)
Q Consensus 903 ~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~R~~Nl 981 (1362)
+|+..++|. ++.++++|+++.|.+|++++.++.++||+.++++|||||.||+++++|++||++|..||+||+|+|++|+
T Consensus 313 cGfS~DLSgpV~dRAlfH~DNaYf~p~v~~~s~~~kTntvSnTAfRGFGGPQGm~~~Eriid~vA~alGkdpleiRk~Nf 392 (781)
T COG4631 313 CGFSADLSGPVTDRALFHADNAYFYPHVHILSRPLKTNTVSNTAFRGFGGPQGMLGIERIIDEVAYALGKDPLEIRKLNF 392 (781)
T ss_pred cCcccccCccchhhheeccccceeccceeeecceeeccccccccccccCCcchhhHHHHHHHHHHHHhCCCHHHHHhhhc
Confidence 999999886 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCCCCc-ccCCHHHHHHHHHHhCCchhHHHHHHHHhhcCCCceeeeeeeeeEeecccC-----CCcEEE
Q 000669 982 HTRNSLNLFYESSAGEH-AEYTIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVK-----SSPGKV 1055 (1362)
Q Consensus 982 ~~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGi~~a~~~~~~~~~-----~~~a~v 1055 (1362)
+.++... .+|.+|. .+..+.++|+++..+++|..|++++..||+.++..||||++.|.+||+++. +.+|+|
T Consensus 393 Yg~~~~n---~TpYhQ~Vednii~ri~~ELeaSsdyaaRr~~i~aFNa~spv~krGlAlTPVKFGISFt~t~~NQAGALV 469 (781)
T COG4631 393 YGKDGRN---VTPYHQTVEDNIIARIVDELEASSDYAARREAIRAFNAASPVIKRGLALTPVKFGISFTATHYNQAGALV 469 (781)
T ss_pred cCCCCCc---cCccccchHHhHHHHHHHHHHhcchHHHHHHHHHHhhccChhhhccccccceeeeEEEeeeeeccCceEE
Confidence 9764321 1233444 344788999999999999999999999999999999999999999999875 789999
Q ss_pred EEcCCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCcccccccchHHHHHHH
Q 000669 1056 SILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLC 1135 (1362)
Q Consensus 1056 ~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~A 1135 (1362)
+||.||||.++|||+|||||++||++|++|++|+| ++++|+|..++|+++||++.|++|.+++++|.|++.|
T Consensus 470 HvY~DGSi~lNHGGTEMGQGL~tKvaQVvA~~fqv--------d~~rVkitaT~T~KVpNTSaTAASSGsDLNGmAa~dA 541 (781)
T COG4631 470 HVYTDGSIHLNHGGTEMGQGLYTKVAQVVAEEFQV--------DIDRVKITATTTDKVPNTSATAASSGSDLNGMAAQDA 541 (781)
T ss_pred EEeccCeEEEcCCCcccccchhHHHHHHHHHHhCc--------ccceEEEeccccCCCCCCccccccccCCcccHHHHHH
Confidence 99999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhc---------------cCCCCHHHHHHHHhhcCceeEEEEEecC----------CCCCCccee
Q 000669 1136 CNVLVERLSALRGRLLER---------------MGSVNWETLIQQAHLQSVNLSASSLYVP----------DSTSIHYLN 1190 (1362)
Q Consensus 1136 c~~L~~rl~~~~~~~~~~---------------~~~~~w~~~~~~a~~~~~~l~~~~~~~~----------~~~~~~~~~ 1190 (1362)
|++||+||..++++-+.. ...+.|.+++.+||..++.|++.++|.. .+.+|.||+
T Consensus 542 a~qIk~RLv~fAA~~~~V~~~~v~F~~n~vrig~~~~~F~~lv~~AY~arvqLsaaGFY~TPkihwdra~~~G~PFyYFa 621 (781)
T COG4631 542 ARQIKERLVAFAAEHWGVPEEDVAFLPNRVRIGGQELAFADLVKQAYFARVQLSAAGFYKTPKIHWDRAAGRGRPFYYFA 621 (781)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHeEecCCeeEEcceecCHHHHHHHHhheeeeeeccccccCCccccchhhcCCCceEEEe
Confidence 999999999998754321 1247899999999999999999999964 357889999
Q ss_pred eEEE---EEEEccCCcEEEEEEEEEEecCCCCChhhhhhhhhchhHhhHHHHhhccceeCCCCccccCCCCCCCCCCCCC
Q 000669 1191 YGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDT 1267 (1362)
Q Consensus 1191 ~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~al~Ee~~~d~~G~~l~~~~~~Y~iP~~~d 1267 (1362)
|||. |+||++||+.+++|.++.||+|+++||.++.|||||||+||+||.++||+.||++|++.|....+||||.++|
T Consensus 622 YGAacSEV~vDtlTGey~~~R~DiLHDvG~SLNpaiDlGQiEGgFvQGmGWLTtEeL~wd~kGRlrThapSTYKiP~~sd 701 (781)
T COG4631 622 YGAACSEVSVDTLTGEYKVERTDILHDVGRSLNPAIDLGQIEGGFVQGMGWLTTEELWWDEKGRLRTHAPSTYKIPLASD 701 (781)
T ss_pred ecceeeeEEEecccceEEEEeehhhhhhhhhcccccccccccchhcccccccchhhheeccCCCeeecCCccccCccccc
Confidence 9987 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEEEecCCCC-CCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhcccccCCCCCcceeccCCCCChHHHHHHc
Q 000669 1268 IPKQFNVEILNSGHH-QKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKELC 1346 (1362)
Q Consensus 1268 iP~~~~v~l~~~~~~-p~g~~gsKgvGE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~tpe~i~~a~ 1346 (1362)
.|+.|+|.+.+.+.+ ...+++||++||||++++.||..||++|+.+- +|. +. ...++.|+|||+|++++
T Consensus 702 rP~~f~V~L~~~~~n~e~ti~rSKAVGEPPlmL~iSV~~Al~~AvAsv-aD~-------r~--~p~ldaPATpErVlmav 771 (781)
T COG4631 702 RPKIFNVRLAEWSENAEPTIHRSKAVGEPPLMLGISVLEALSDAVASV-ADY-------RV--CPRLDAPATPERVLMAV 771 (781)
T ss_pred CchheeeehhccccccccccccccccCCCCcchhHHHHHHHHHHHHHh-ccc-------Cc--CCCCCCCCCHHHHHHHH
Confidence 999999999986543 44679999999999999999999999999643 332 11 33489999999999998
Q ss_pred CC
Q 000669 1347 GL 1348 (1362)
Q Consensus 1347 ~~ 1348 (1362)
..
T Consensus 772 e~ 773 (781)
T COG4631 772 ER 773 (781)
T ss_pred HH
Confidence 54
No 10
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=100.00 E-value=7.5e-144 Score=1377.25 Aligned_cols=708 Identities=25% Similarity=0.314 Sum_probs=627.2
Q ss_pred CCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCccc--
Q 000669 585 PVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGC-- 662 (1362)
Q Consensus 585 ~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~-- 662 (1362)
.|||+++|+|+.+||||+++|++|++ +|||||++++|||++||||+|||+++|+++|||++|+|++|+| +.|+..
T Consensus 2 ~vG~~~~r~d~~~kvtG~~~Y~~D~~-~~gmL~a~~~rSp~aharI~siD~~~A~~~pGV~~Vvt~~D~p--~~~~~~~~ 78 (759)
T PRK09970 2 AIGKSIMRVDAIAKVTGRAKYTDDYV-MAGMLYAKYVRSPIAHGKVKSIDTEEARSLPGVEAVFTWEDVP--DIPFPTAG 78 (759)
T ss_pred CCCCCCcCcchHHhCcCCccccccCC-CCCCEEEEEEcCCCceEEEeeeeHHHHHhCCCcEEEEeHHHcC--Cccccccc
Confidence 48999999999999999999999997 6899999999999999999999999999999999999999998 433210
Q ss_pred -c------cCCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHHHHhcCCC--cccCCC
Q 000669 663 -K------SMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSL--FEIFPH 733 (1362)
Q Consensus 663 -~------~~~~~~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~--~~~~~~ 733 (1362)
. ....++|+|++++|||+|||||+|||+|+++|++|+++|+|+| |+| |+++|+++|+++++. |+..+|
T Consensus 79 ~~~~~~~~~~~~~~~~la~~~Vr~~G~~VAaVvA~~~~~A~~A~~~i~Vey--e~l-p~v~~~~~Al~~~a~~ih~~~~n 155 (759)
T PRK09970 79 HPWSLDPNHRDIADRALLTRHVRHHGDAVAAVVARDELTAEKALKLIKVEY--EEL-PVITDPEAALAEGAPPIHNGRGN 155 (759)
T ss_pred cccCCCCCCCCCCCccCcCCEEEEcCCeEEEEEeCCHHHHHHHhCCCcEeE--EeC-CccCCHHHHhCCCCCccCCCCCc
Confidence 0 0113779999999999999999999999999999999999999 889 999999999988773 432234
Q ss_pred cc---ccccCchhhhhhccccceEEEEEEeCcccCCCCCCCcEEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccE
Q 000669 734 WY---PKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNV 810 (1362)
Q Consensus 734 ~~---~~~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kV 810 (1362)
+. ....||++++|++|+++ ||++|++++|+|+||||++|+|+|+++|+|+||+|||+|+.+|..||++||||++||
T Consensus 156 i~~~~~~~~Gd~~~a~~~a~~v-ve~~y~~~~~~h~~mEp~~~iA~~~~~g~l~v~~stQ~p~~~~~~ia~~Lglp~~~V 234 (759)
T PRK09970 156 LLKQSTMSTGNVQQTIKAADYQ-VQGHYETPIVQHCHMENVTSYAYMEDDGRITIVSSTQIPHIVRRVVGQALGIPWGKV 234 (759)
T ss_pred eeeeeeeccCChhHhhccCCEE-EEEEEEECCEeEeccCCceEEEEECCCCCEEEEECCCcHHHHHHHHHHHhCCCHHHE
Confidence 32 35789999999999985 999999999999999999999999976789999999999999999999999999999
Q ss_pred EEEEccCCCCCCCccCcccccccchhhhhhhhhHHHHHHHHHHhc-CCCEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCC
Q 000669 811 RVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKL-CRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSN 889 (1362)
Q Consensus 811 rV~~~~vGGgFG~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~-gRPVkl~~tReed~~~~~~R~~~~~~~k~g~~~d 889 (1362)
||+++++|||||+|.+.. ....||++|+++ ||||||+|||+|+|..+.+||++.+++|+|+|+|
T Consensus 235 rV~~~~vGGgFG~K~~~~---------------~~~~aa~la~~~~grPVk~~~~R~E~~~~~~~r~~~~~~~~~g~~~d 299 (759)
T PRK09970 235 RVIKPYVGGGFGNKQDVL---------------EEPLAAFLTSKVGGRPVKVSLSREECFLATRTRHAFTIDIKMGVNRD 299 (759)
T ss_pred EEEeCCCCCCcCcccccC---------------HHHHHHHHHHHhcCCCeEEeechhHhhhcCCCCCceEEEEEEEECCC
Confidence 999999999999997643 224566778888 9999999999999999999999999999999999
Q ss_pred CcEEEEEEEEEecCCCCCCCCc-hhhHHhhccCCCCcCCcEEEEEEEeecCCCCccccCCCChhHHHHHHHHHHHHHHHH
Q 000669 890 GKITALQLNILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVAST 968 (1362)
Q Consensus 890 G~i~a~~~~~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~ 968 (1362)
|+|++++++++.|+|+|.++++ ++........++|+|||++++++.|+||++|+|+|||||.+|++|++|++||++|++
T Consensus 300 G~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~ 379 (759)
T PRK09970 300 GTLKGYSLDVLSNTGAYASHGHSIASAGGNKVAYLYPRCAYKYSSKTVYTNLPSAGAMRGYGAPQVVFAVESMLDDAATA 379 (759)
T ss_pred CcEEEEEEEEeeccccCCCcchHHHHHHHhhcCCCccCceEEEEEEEEECCCCCCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence 9999999999999999998775 444455567899999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHhhCCCCCCccccccCCC-CCcccC-CHHHHHHHHHHhCCchhHHHHHHHHhhcCCCceeeeeeeeeEeec
Q 000669 969 LSMEVDFVRSINLHTRNSLNLFYESSA-GEHAEY-TIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEM 1046 (1362)
Q Consensus 969 lG~DP~e~R~~Nl~~~~~~~~~~~~~~-g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGi~~a~~~~~~ 1046 (1362)
|||||+|||+||+.++++.+ +. |+.+++ ++++||+++++.++|+++++..+ +.+.|++||+|+++..++.
T Consensus 380 lg~DP~e~R~~N~~~~g~~~-----~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~rGiG~a~~~~~~ 451 (759)
T PRK09970 380 LGIDPVEFRLRNAAREGDAN-----PLSGKRIYSAGLPECLEKGRKIFEWDKRRAECK---NQQGNLRRGVGVACFSYTS 451 (759)
T ss_pred hCcCHHHHHHHhCCCCCCcC-----CCCCeeecCCCHHHHHHHHHHhcCchhhhHhHh---hhcCCceEEEEEEEEEEee
Confidence 99999999999999876543 22 554444 89999999999999998766433 1245688999999988876
Q ss_pred ccC-----CCcEEEEEcCCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcC-CCCCccCCCCCc
Q 000669 1047 FVK-----SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQS-DTLSLIQGGTTS 1120 (1362)
Q Consensus 1047 ~~~-----~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~-dT~~~p~~~~t~ 1120 (1362)
+.. ++.+.|+|++||+|+|.+|.+|||||++|+++||+||+||+ |+++|+|..+ ||+.+|++++|+
T Consensus 452 ~~~~~~~~~~~a~v~i~~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi--------~~~~V~v~~~~dT~~~p~~~gt~ 523 (759)
T PRK09970 452 GTWPVGLEIAGARLLMNQDGTVQVQSGATEIGQGSDTVFSQMVAETVGI--------PVSDVRVISTQDTDVTPFDPGAY 523 (759)
T ss_pred cCCCCCCCcceEEEEEccCceEEEEECCCCcCCCHHHHHHHHHHHHhCC--------CHHhEEEEccCCCCCCCCCCCCc
Confidence 543 57899999999999999999999999999999999999999 9999999988 999999999999
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHhhhc--------c--------C--CCCHHHHHHHHhhc---CceeEEEEEe
Q 000669 1121 GSTTSESSCEAVRLCCNVLVERLSALRGRLLER--------M--------G--SVNWETLIQQAHLQ---SVNLSASSLY 1179 (1362)
Q Consensus 1121 gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~--------~--------~--~~~w~~~~~~a~~~---~~~l~~~~~~ 1179 (1362)
|||+|.++|.|+++||++||+||+.++++++.. + + .++|.+++..++.. ...+...+.|
T Consensus 524 aSr~t~~~g~Av~~Aa~~lr~~l~~~aa~~l~~~~~~l~~~~G~v~~~~~~~~~~~~~~la~~a~~~~~~~~~~~~~~~~ 603 (759)
T PRK09970 524 ASRQSYVAGPAIRKAALELKEKILAHAAVMLHQSAMNLDIIDGHIVVKRPGEPLMSLEELAMDAYYHPERGGQITAESSI 603 (759)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHEEEECCEEEECCCCCccccHHHHHHHhhccccCCCceeEEEEe
Confidence 999999999999999999999999987765421 1 1 37899998776542 2346667777
Q ss_pred cCCCCCCcceeeEEEEEEEccCCcEEEEEEEEEEecCCCCChhhhhhhhhchhHhhHHHHhhccceeCCC-CccccCCCC
Q 000669 1180 VPDSTSIHYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSD-GLVVSEGTW 1258 (1362)
Q Consensus 1180 ~~~~~~~~~~~~~a~VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~al~Ee~~~d~~-G~~l~~~~~ 1258 (1362)
.+....++|.++.++||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||++ |+++++||+
T Consensus 604 ~~~~~~~~~~a~~aeVeVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~qGiG~aL~E~~~~d~~~G~~~~~~~~ 683 (759)
T PRK09970 604 KTTTNPPAFGCTFVDVEVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDEKTGVVRNPNLL 683 (759)
T ss_pred cCCCCCCceEEEEEEEEEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHHHHHHHHhcceeEEcCCCCeECCCChh
Confidence 6543344555555559999999999999999999999999999999999999999999999999999975 999999999
Q ss_pred CCCCCCCCCCCCccEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhcccccCCCCCcceeccCCCCC
Q 000669 1259 TYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPAT 1338 (1362)
Q Consensus 1259 ~Y~iP~~~diP~~~~v~l~~~~~~p~g~~gsKgvGE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~t 1338 (1362)
+|++|++.|+|+ |+|++++++ +|.+|||+||+||+++.+ +++||+|||++|++ .+++++|+|
T Consensus 684 dY~ip~~~d~P~-i~v~~ve~~-~~~~p~GaKgvGE~~~~~---~~~AIanAi~~A~G-------------~r~~~lP~t 745 (759)
T PRK09970 684 DYKLPTMMDLPQ-LESAFVEIY-EPQSAYGHKSLGEPPIIS---PAPAIRNAVLMATG-------------VAINTLPMT 745 (759)
T ss_pred hccCCCcccCCC-eEEEEEecC-CCCCCCCCcccCCCcccc---hHHHHHHHHHHhhC-------------CCcCCCCCC
Confidence 999999999995 999999874 678999999999999886 77799999999995 557899999
Q ss_pred hHHHHHHcCC
Q 000669 1339 MPVVKELCGL 1348 (1362)
Q Consensus 1339 pe~i~~a~~~ 1348 (1362)
||+|++++..
T Consensus 746 pe~v~~al~~ 755 (759)
T PRK09970 746 PQRLFEEFKE 755 (759)
T ss_pred HHHHHHHHHh
Confidence 9999999864
No 11
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=1.1e-143 Score=1369.81 Aligned_cols=695 Identities=24% Similarity=0.305 Sum_probs=618.8
Q ss_pred ccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCcccccCCCCc
Q 000669 590 ITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPE 669 (1362)
Q Consensus 590 ~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~~~~~~ 669 (1362)
++|+|+..||||+++|++|+. +|||||+++||||++||+|+|||+|+|+++|||++|+|++|+| + +++......|+
T Consensus 1 ~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~vvrSp~ahA~I~siD~s~A~a~pGV~~V~t~~D~p--~-~~g~~~~~~d~ 76 (746)
T TIGR03194 1 VPLVDGVEKVTGKAKYTADLA-APGALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCP--V-PYGVLPIAENE 76 (746)
T ss_pred CcCcchHhhCccccccccCCC-CCCCEEEEEEecCCccEEEeeccHHHHHhCCCcEEEEeHHHCC--c-ccCCCCCCCCC
Confidence 479999999999999999997 6899999999999999999999999999999999999999998 2 33322223588
Q ss_pred ccccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHHHHhcCCC--ccc-CCCc---cccccCchh
Q 000669 670 PLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSL--FEI-FPHW---YPKQVGDIT 743 (1362)
Q Consensus 670 ~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~--~~~-~~~~---~~~~~Gd~~ 743 (1362)
|+|++++|||+|||||+|||+|+++|++|+++|+||| |+| |+++|+++|++++++ |+. ++|+ .....||++
T Consensus 77 ~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~d~~~Al~~~a~~ih~~~~~Nv~~~~~~~~Gd~~ 153 (746)
T TIGR03194 77 YPLARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEY--EEL-PAYMDPKAAMKAGAILLHDNKPGNIEREVHNEFGDVA 153 (746)
T ss_pred ccCCCCeEEEcCCeEEEEEECCHHHHHHHhcCCcEEE--ecC-CCcCCHHHHhcCCCCccCCCCCCcEEEEEeeccCCHh
Confidence 9999999999999999999999999999999999999 889 899999999998874 432 2443 245789999
Q ss_pred hhhhccccceEEEEEEeCcccCCCCCCCcEEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEccCCCCCC
Q 000669 744 KGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDE-DNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGGGFG 822 (1362)
Q Consensus 744 ~a~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~-dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG 822 (1362)
++|++|+++ ||++|++++|+|+||||++|+|+|++ +|+|+||+|||+|+.+|..||++||||++||||+++++|||||
T Consensus 154 ~a~~~a~~v-ve~~~~~~~~~h~~mEp~~~~A~~~~~~~~l~v~~stQ~p~~~r~~va~~Lglp~~kVrV~~~~vGGgFG 232 (746)
T TIGR03194 154 AAFAEADLI-REKTFTCAEVNHAHMEPNATLAEYDPVRGMLTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFG 232 (746)
T ss_pred HHhccCCEE-EEEEEEECCEeEEccCCCeEEEEEeCCCCeEEEEECCCchHHHHHHHHHHhCCCHHHeEEEcCCCcCccc
Confidence 999999985 99999999999999999999999985 5789999999999999999999999999999999999999999
Q ss_pred CccCcccccccchhhhhhhhhHHHHHHHHHHhcCCCEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCcEEEEEEEEEec
Q 000669 823 GKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILID 902 (1362)
Q Consensus 823 ~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gRPVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d 902 (1362)
+|.... + +.+.||++|+++||||||+|||+|+|..+.+||++.+++|+|+|+||+|++++++++.|
T Consensus 233 ~K~~~~-~-------------~~~~aal~a~~~grPVk~~~~ReE~~~~~~~R~~~~~~~~~g~~~dG~i~a~~~~~~~d 298 (746)
T TIGR03194 233 ARVEPL-N-------------FEIIAGLLARKAKGTVRLLQTREETFITHRGRPQTYVKMKIGLKKDGKITACAAEVVQR 298 (746)
T ss_pred cccccc-h-------------HHHHHHHHHHHhCCCEEEecchhhhhhcCCCCCceEEEEEEEECCCCeEEEEEEEEeec
Confidence 998652 2 45788999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCc-hhhHHhhccCCCCcCCcEEEEEEEeecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhC
Q 000669 903 AGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINL 981 (1362)
Q Consensus 903 ~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~R~~Nl 981 (1362)
+|+|.++++ ++......+.++|+|||++++++.|+||++|+|+|||||.+|+.|++|++||++|++|||||+|||+||+
T Consensus 299 ~Gay~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~lA~~lg~DPve~R~~N~ 378 (746)
T TIGR03194 299 GGAYAGYGIVTILYAGALLHGLYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRAAFESLLDEMAAELGIDPFAIRRRNL 378 (746)
T ss_pred ccccCCcchHHHHHHHHhcCCCcccceEEEEEEEEEcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhC
Confidence 999998775 4444555678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCCCCcccC-CHHHHHHHHHHhCCchhHHHHHHHHhhcCCCceeeeeeeeeEeeccc---------CCC
Q 000669 982 HTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFV---------KSS 1051 (1362)
Q Consensus 982 ~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGi~~a~~~~~~~~---------~~~ 1051 (1362)
.+.++. ++.|+.+++ ++++||+++++.++|++|++.. +++||+|+++..++.+. .++
T Consensus 379 ~~~~~~-----~~~g~~~~s~~~~~~l~~~~e~~~w~~~~~~~--------~~~rGiG~a~~~~~~~~~~~~~~~~~~~~ 445 (746)
T TIGR03194 379 LQAPTV-----TMNDLRVMSYGLPECLEKVEQASGWEERKGRL--------PKGRGLGIACSHFVSGSAKPIHFTGEPHA 445 (746)
T ss_pred cCCCCC-----CCCCceecCCCHHHHHHHHHHhcCchhhhhhc--------cccEEEEEEEEEEeccCCcccccCCCCCc
Confidence 876543 355766554 8999999999999998764421 35789999888775432 257
Q ss_pred cEEEEEcCCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCcccccccchHHH
Q 000669 1052 PGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEA 1131 (1362)
Q Consensus 1052 ~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~gS~~t~~~g~A 1131 (1362)
++.|++++||+|+|.+|++|||||++|+++||+||+||+ |+|+|+|..+||+.+|++++|+|||+|+++|+|
T Consensus 446 ~a~v~l~~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGi--------p~d~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~A 517 (746)
T TIGR03194 446 TVALKLDFDGGITLLTGAADIGQGSSTIASQVAAEVLGV--------RLSRIRVISADSALTPKDNGSYSSRVTFMVGNA 517 (746)
T ss_pred eEEEEEcCCccEEEEEcCCCCCCCHHHHHHHHHHHHhCC--------CHHhEEEEccCCCCCCCCCCChhHhHHHHHHHH
Confidence 899999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc------------------cCCCCHHHHHHHHhhcCceeEEEEEecCCCC---------
Q 000669 1132 VRLCCNVLVERLSALRGRLLER------------------MGSVNWETLIQQAHLQSVNLSASSLYVPDST--------- 1184 (1362)
Q Consensus 1132 v~~Ac~~L~~rl~~~~~~~~~~------------------~~~~~w~~~~~~a~~~~~~l~~~~~~~~~~~--------- 1184 (1362)
|++||++||+||+.++++++.. +..++|.+++..++.....+.+.++|.....
T Consensus 518 v~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 597 (746)
T TIGR03194 518 AIDAAEELKGVLVAAAAKKLDAREEDIECAGEMFFVSGSADPGLSFQEVVKAALVDSGTITVKGTYTCPPEFQGGKKRGG 597 (746)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEECCCCCCceeHHHHHHHhcccCCCceEEEEecCCCcccccccccc
Confidence 9999999999999998776421 1236899998655544446778887752110
Q ss_pred ---CCcceeeEEE---EEEEccCCcEEEEEEEEEEecCCCCChhhhhhhhhchhHhhHHHHhhccceeCCCCccccCCCC
Q 000669 1185 ---SIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTW 1258 (1362)
Q Consensus 1185 ---~~~~~~~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~al~Ee~~~d~~G~~l~~~~~ 1258 (1362)
...+++|+|+ ||||++||+++|+|+++++|||++|||++++||||||++||||++|+|++.||+ |+++|+||+
T Consensus 598 ~~~~~~~~~~~a~~aeVeVD~~TG~v~v~~~~~~~D~G~viNP~~v~gQi~Gg~~~GiG~aL~E~~~~d~-G~~~~~~l~ 676 (746)
T TIGR03194 598 AVGSTMGFSYAAQVVEVSVDEETGKVTVHKVWVAVDCGKAINPLAVEGQVQGAVWMGMGQALSEETVYDN-GRMKHASLL 676 (746)
T ss_pred ccCcccccceeEEEEEEEEECCCCCEEEEEEEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHhcCceEecC-CeECCCChh
Confidence 0113345555 999999999999999999999999999999999999999999999999999984 999999999
Q ss_pred CCCCCCCCCCCCccEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhcccccCCCCCcceeccCCCCC
Q 000669 1259 TYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPAT 1338 (1362)
Q Consensus 1259 ~Y~iP~~~diP~~~~v~l~~~~~~p~g~~gsKgvGE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~t 1338 (1362)
+|++|++.|+|+ |+++++|++ +|.+|||+||+||+++.+ +++||+|||++|+| ++++++|+|
T Consensus 677 ~Y~ipt~~d~P~-i~v~~ve~~-~~~~p~Gakg~GE~~~~~---~~~AIanAI~~A~G-------------~r~~~lP~t 738 (746)
T TIGR03194 677 DYRVPTIVESPD-IEVIIVESM-DPNGPFGAKEASEGALAG---FLPAIHNAVYDAVG-------------VRATDLPLT 738 (746)
T ss_pred hccCCChhccCC-eEEEEEeCC-CCCCCCCCCcCCCCcccc---hHHHHHHHHHHhhC-------------CCcccCCCC
Confidence 999999999995 999999865 678999999999999997 67799999999995 567899999
Q ss_pred hHHHHHHc
Q 000669 1339 MPVVKELC 1346 (1362)
Q Consensus 1339 pe~i~~a~ 1346 (1362)
||+|+++|
T Consensus 739 pe~v~~al 746 (746)
T TIGR03194 739 PDRVTEAL 746 (746)
T ss_pred HHHHHhhC
Confidence 99999875
No 12
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=100.00 E-value=1.6e-142 Score=1365.05 Aligned_cols=705 Identities=22% Similarity=0.258 Sum_probs=613.2
Q ss_pred chhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCcccccCC--CCccc
Q 000669 594 GAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMF--GPEPL 671 (1362)
Q Consensus 594 d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~~~~~--~~~~~ 671 (1362)
|+.++|||+++|++|++ +|||||+++||||++||+|++||+|+|+++|||++|+|++|+| +.|....+.. .++|+
T Consensus 1 e~~r~vtG~a~Y~~Di~-~pgmL~a~~vrSp~aha~I~~ID~s~A~~~pGV~~V~t~~D~p--~~~~~~~~~~~~~~~~~ 77 (770)
T TIGR02416 1 EDIRFIQGKGNYVDDVK-LPGMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLK--PLNLHWMPTLAGDVQAV 77 (770)
T ss_pred CCcccccccccccccCC-CCCCEEEEEEcCCCccEEEecccHHHHhhCCCcEEEEEHHHcC--CccCCcCCCCCCCCccc
Confidence 46789999999999997 6899999999999999999999999999999999999999998 3222111111 23789
Q ss_pred ccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHHHHhcCCC--ccc-CC------------Cc-c
Q 000669 672 FANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSL--FEI-FP------------HW-Y 735 (1362)
Q Consensus 672 ~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~--~~~-~~------------~~-~ 735 (1362)
|++++|||+|||||+|||+|+++|++|+++|+|+| |+| |+|+|+++|++++++ |+. .. |. .
T Consensus 78 la~~~Vry~Ge~Va~VvA~t~~~A~~A~~~v~V~y--e~l-p~v~d~~~A~~~~a~~ih~~~~~~~~~~~~~~n~~~~~~ 154 (770)
T TIGR02416 78 LADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDY--EPL-PVVIDPFKALEPDAPVLREDLKGKTTGAHGARKHHNHIF 154 (770)
T ss_pred CcCCEEEEcCCcEEEEEECCHHHHHHHhccceeee--ecC-CccCCHHHHhcCCCceecCCCCCccccccccccccceee
Confidence 99999999999999999999999999999999999 889 999999999988774 431 11 11 1
Q ss_pred c---cccCchhhhhhccccceEEEEEEeCcccCCCCCCCcEEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCccEE
Q 000669 736 P---KQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDE-DNCMVVYSSTQCPENVHATISRCLGIPQHNVR 811 (1362)
Q Consensus 736 ~---~~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~-dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kVr 811 (1362)
. ...||++++|++|+++ ||++|++++|+|+||||++|+|+|++ +|+|+||+|||+|+.+|..||++||||++|||
T Consensus 155 ~~~~gd~gd~~~af~~a~~v-ve~~~~~~~~~h~~mEp~~~iA~~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~Vr 233 (770)
T TIGR02416 155 RWEIGDKAATDAVFAKAEVV-VKQMMTYPRVHPSPLETCGCVASMDPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIR 233 (770)
T ss_pred EEecCCccchhHHhccCCEE-EEEEEEeCceeeEcCCCCeEEEEEeCCCCeEEEEECCCcHHHHHHHHHHHhCCCHHHEE
Confidence 1 2445679999999985 99999999999999999999999985 57899999999999999999999999999999
Q ss_pred EEEccCCCCCCCccCcccccccchhhhhhhhhHHHHHHHHHHhcCCCEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCc
Q 000669 812 VITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGK 891 (1362)
Q Consensus 812 V~~~~vGGgFG~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gRPVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~ 891 (1362)
|+++++|||||+|...... . ..||++|+++||||||+|||+|+|..+++|||+.+++|+|+|+||+
T Consensus 234 V~~~~vGGgFG~K~~~~~~-------------~-~~aa~~A~~~gRPVk~~~sR~E~~~~~~~r~~~~~~~k~g~d~dG~ 299 (770)
T TIGR02416 234 VISPDIGGGFGNKVGIYPG-------------Y-VCAIVASIVLGVPVKWVEDRMENLSTTSFARDYHMTGELAATKDGK 299 (770)
T ss_pred EEcCCCCCCcccccccccH-------------H-HHHHHHHHHhCCCEEEecchHHhhhcCCCCCceEEEEEEEECCCCc
Confidence 9999999999999864322 2 3478899999999999999999999999999999999999999999
Q ss_pred EEEEEEEEEecCCCCCCCCc-hhhHHhh--ccCCCCcCCcEEEEEEEeecCCCCcc-ccC-CCChhHHHHHHHHHHHHHH
Q 000669 892 ITALQLNILIDAGMYPDISP-VMPMIML--GTLKKYDWGALHFDIKVCRTNLPSRS-AMR-APGEVQASFIAEAVIEHVA 966 (1362)
Q Consensus 892 i~a~~~~~~~d~Ga~~~~s~-~~~~~~~--~~~~~Y~ipn~~~~~~~v~TN~~~~g-a~R-g~G~~q~~fa~E~~md~lA 966 (1362)
|++++++++.|+|+|.+++. ++..... .+.++|+|||++++++.|+||++|.+ +|| |||.+|++|++|++||++|
T Consensus 300 i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~gta~Rgg~G~pq~~fa~E~~mD~~A 379 (770)
T TIGR02416 300 ILAMRCNVLADHGAFDACADPSKWPAGFFNICTGSYDIPVAHCAVDGVYTNKAPGGVAYRCSFRVTEAVYAIERAVDTLA 379 (770)
T ss_pred EEEEEEEEEeeccccCCCccchhhhhhhhhhcCCccccceEEEEEEEEECCCCCCCCccccCCccHHHHHHHHHHHHHHH
Confidence 99999999999999987654 3222222 46799999999999999999999997 999 8999999999999999999
Q ss_pred HHcCCCHHHHHHhhCCCCCCccccccCCCCCcccC-CHHHHHHHHHHhCCchhHHHHHHHHhhcCCC-ceeeeeeeeeEe
Q 000669 967 STLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFNQRTEMIKEFNRSNLW-QKRGICRVPIVH 1044 (1362)
Q Consensus 967 ~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~-~krGi~~a~~~~ 1044 (1362)
++|||||+|||+||++++++. ||.++.|+.+++ .+++||+++++.++|++|++..+++++.+++ ++||+|+++..+
T Consensus 380 ~~lg~DP~e~R~~N~~~~~~~--p~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~G~a~~~~ 457 (770)
T TIGR02416 380 QRLEMDSADLRIKNFIQPEQF--PYTAPLGWEYDSGDYPLAMKKAMDTVDYHQLRAEQAAKRKRGETRELMGIGISFFTE 457 (770)
T ss_pred HHhCcCHHHHHHHhCCCCccC--ccccCCCceecCCCHHHHHHHHHHhcCchhhHHHHHHHHhcCCCCceEEEEEEEEEE
Confidence 999999999999999987643 566777887666 8999999999999999877655545444443 356888877655
Q ss_pred ecccC------------CCcEEEEEcCCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCC
Q 000669 1045 EMFVK------------SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLS 1112 (1362)
Q Consensus 1045 ~~~~~------------~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~ 1112 (1362)
..+.. ++.+.|+|++||+|+|.+|++|||||++|+++||+||+||| |+|+|+|..+||+.
T Consensus 458 ~~~~~~~~~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~ 529 (770)
T TIGR02416 458 IVGAGPSKNCDILGVGMFDSCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGI--------PAEDIMVEEGDTDT 529 (770)
T ss_pred eccCCCcccccccccCccceEEEEECCCceEEEEECCCCCCCCchHHHHHHHHHHHCC--------CHHHEEEEecCCCC
Confidence 44332 34689999999999999999999999999999999999999 99999999999999
Q ss_pred ccCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHHhhhc--------c------C----CCCHHHHHHHHhhc-----
Q 000669 1113 LIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLER--------M------G----SVNWETLIQQAHLQ----- 1169 (1362)
Q Consensus 1113 ~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~--------~------~----~~~w~~~~~~a~~~----- 1169 (1362)
+|++++|+|||+|.++|+||++||++|++||++++++++.. + + .++|.+++..++..
T Consensus 530 ~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~l~~~~~~~~~~~~ 609 (770)
T TIGR02416 530 APYGLGTYGSRSTPVAGAATALAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGDPSKFKTMADIAWAAYNSPPPGL 609 (770)
T ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEECCCCCCcccHHHHHHHHhccCccCc
Confidence 99999999999999999999999999999999997765321 1 1 27899998877642
Q ss_pred CceeEEEEEecCCCCCCcceeeEEEEEEEccCCcEEEEEEEEEEecCCCCChhhhhhhhhchhHhhHHHHhhccceeCCC
Q 000669 1170 SVNLSASSLYVPDSTSIHYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSD 1249 (1362)
Q Consensus 1170 ~~~l~~~~~~~~~~~~~~~~~~~a~VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~al~Ee~~~d~~ 1249 (1362)
+..|.+.++|.++...++|.++.++||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||++
T Consensus 610 ~~~l~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d~~ 689 (770)
T TIGR02416 610 EPGLEAVNYYDPPNMTYPFGAYFCVVDIDVDTGVAKVRRFYALDDCGTRINPMIIEGQIHGGLTEGFAVAMGQEIRFDEQ 689 (770)
T ss_pred CCceEEEEEeCCCCCCCCceeEEEEEEEECCCCeEEEEEEEEEEECCCccCHHHHHHHHHhhHHHHHHHHHhCcceECCC
Confidence 13488888886643334454555559999999999999999999999999999999999999999999999999999989
Q ss_pred CccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhcccccCCCCCcc
Q 000669 1250 GLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDI 1329 (1362)
Q Consensus 1250 G~~l~~~~~~Y~iP~~~diP~~~~v~l~~~~~~p~g~~gsKgvGE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g~~~ 1329 (1362)
|+++|+||+||++|++.|+|+ +++++++++ +|.+|||+||+||+++++ +++||+|||++|+.+. |
T Consensus 690 G~~l~~~~~dY~iPta~DvP~-~~~~~~e~~-~~~~p~GaKGvGE~~~~~---~~aAianAI~dA~~~~-------G--- 754 (770)
T TIGR02416 690 GNVLGASLMDYFLPTAVETPH-WETDHTVTP-SPHHPIGAKGVGESPHVG---SVPCFSNAVVDAYAFL-------G--- 754 (770)
T ss_pred CCCCCCChhhCcCCchhcCCC-eEEEEeecC-CCCCCCCccccCCccccc---HHHHHHHHHHHHHhhc-------C---
Confidence 999999999999999999996 999999875 578999999999999998 5569999999998543 3
Q ss_pred eeccCCCCChHHHHH
Q 000669 1330 TFNLEVPATMPVVKE 1344 (1362)
Q Consensus 1330 ~~~~~~P~tpe~i~~ 1344 (1362)
++++++|+|||+||+
T Consensus 755 v~~~~lP~Tpe~v~~ 769 (770)
T TIGR02416 755 VGHIDMPHTAWRVWK 769 (770)
T ss_pred CCcccCCCCHHHHhh
Confidence 567899999999986
No 13
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=100.00 E-value=8e-141 Score=1345.24 Aligned_cols=699 Identities=23% Similarity=0.307 Sum_probs=606.6
Q ss_pred CCCCccc-ccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCC-ccc
Q 000669 585 PVGGPIT-KSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGEN-IGC 662 (1362)
Q Consensus 585 ~vG~~~~-r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n-~~~ 662 (1362)
.|||+++ |+|+..||||+++|++|++ +|||||++++|||++||+|++||+++|+++|||++|+|++|+| +.| ++.
T Consensus 2 ~iG~~~~~R~d~~~kvtG~a~Y~~Di~-~pgmL~a~~vrSp~aha~I~siD~s~A~a~pGV~~V~t~~D~p--~~~~~g~ 78 (768)
T TIGR03196 2 GIGKPSRVRPDGPDKVTGEFKYMGDLR-FPGMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQAMVTAADVP--GLARFGI 78 (768)
T ss_pred cCCCcCCcCcchHhhCcccccccccCC-CCCcEEEEEEecCCCcEEEeeccHHHHHhCCCcEEEEehHHCC--CCCCCCc
Confidence 4899999 9999999999999999997 6899999999999999999999999999999999999999998 333 222
Q ss_pred ccCCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHHHHhcCCC--cccCCCcc---cc
Q 000669 663 KSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSL--FEIFPHWY---PK 737 (1362)
Q Consensus 663 ~~~~~~~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~--~~~~~~~~---~~ 737 (1362)
...++|+|++++|||+|||||+|||+|+|+|++|+++|+|+| |+| |+++|+++|+++++. |+ +.|+. ..
T Consensus 79 --~~~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~d~~~a~~~~a~~i~~-~~ni~~~~~~ 152 (768)
T TIGR03196 79 --IIADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDY--EEL-APMDDPDKALQPDAEPLHE-AGNILHEAEF 152 (768)
T ss_pred --cCCCcccccCCEEEEcCCeEEEEEECCHHHHHHHhccCceEE--EeC-CCcCCHHHHhcCCCCeECC-CCcCcceeee
Confidence 235889999999999999999999999999999999999999 888 889999999987653 43 34432 35
Q ss_pred ccCchhhhhhccccceEEEEEEeCcccCCCCCCCcEEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEccC
Q 000669 738 QVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRL 817 (1362)
Q Consensus 738 ~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~v 817 (1362)
..||++++|++|+++ +|++|++++|+|++|||++|+|+|+++|+|+||+|||+|+.+|..||++||||++||||+++++
T Consensus 153 ~~Gd~~~af~~a~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~v 231 (768)
T TIGR03196 153 RHGDPDEGFAAGDTV-FEDQYELGMQDHAFLAPEAALAMPAADGGFDLRAATQHGHKDREQIAACFDIPEEKIRITLAGM 231 (768)
T ss_pred ccCCHhHHhccCCEE-EEEEEEeCCeeeeecCCceEEEEEcCCCCEEEEECCCchHHHHHHHHHHhCCCHHHEEEEeCCC
Confidence 789999999999985 9999999999999999999999999777899999999999999999999999999999999999
Q ss_pred CCCCCCccCcccccccchhhhhhhhhHHHHHHHHHHhcCCCEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCcEEEEEE
Q 000669 818 GGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQL 897 (1362)
Q Consensus 818 GGgFG~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gRPVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~ 897 (1362)
|||||+|.... ..+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+++++
T Consensus 232 GGgFG~K~~~~---------------~~~~aa~~A~~~gRPVk~~~sReE~~~~~~~r~~~~~~~k~g~~~dG~i~a~~~ 296 (768)
T TIGR03196 232 GGAFGGKDDLN---------------IQIHAALLALASGLPVKIAQDRKESFLGGIHRHPAKITFKHGADADGNLLAHDA 296 (768)
T ss_pred CCccCCccccc---------------HHHHHHHHHHHhCCCEEEEechHHhhhcCCCCCCeEEEEEEEECCCCcEEEEEE
Confidence 99999998653 335678999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCc-hhhHHhhccCCCCcCCcEEEEEEEeecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHH
Q 000669 898 NILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFV 976 (1362)
Q Consensus 898 ~~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~ 976 (1362)
+++.|+|+|.++++ +.......+.++|++||++++++.|+||++|+|||||||.+|+.|++|++||++|++|||||+||
T Consensus 297 ~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~ 376 (768)
T TIGR03196 297 KIVADGGAYASLGPAVLAFAVEHAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGGNQITFAHEAHLDRLADALGIDPLDL 376 (768)
T ss_pred EEEecccccCCccHHHHHHHHHhcCCCcccceEEEEEEEEEcCCCCCCccCCCChhHHHHHHHHHHHHHHHHhCcCHHHH
Confidence 99999999998775 34444556689999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCCCCccccccCCCCCcccCCHHHHHHHHHHhCCch-----hHHHHHHHHh------hcCCCceeeeeeeeeEee
Q 000669 977 RSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSFN-----QRTEMIKEFN------RSNLWQKRGICRVPIVHE 1045 (1362)
Q Consensus 977 R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~r~~~~~~~n------~~~~~~krGi~~a~~~~~ 1045 (1362)
|++|+.++++.. |++.+.+. .+.+++||+++++.++|+ ++......|+ +++.|++||+||++..++
T Consensus 377 R~~Nl~~~g~~~-~~g~~~~~--~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~~~rGiG~a~~~~~ 453 (768)
T TIGR03196 377 RRKNARKPGDLG-PLEHRIAA--PDGAAEVIEAIASRPLPKAPILKKANRAVTALPGGRPAAAECGRLQRGTGAAIAMHG 453 (768)
T ss_pred HHHhCCCCCCcC-CCCcccCC--cCCHHHHHHHHHhhccccchhhhhhhhhhhhhhhhhhhhhhcCCeeEEEEEEEEEec
Confidence 999999877643 23322221 347899999999999998 3322211221 123456789999998877
Q ss_pred cccC-----CC--cEEEEEcCCCc--EEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCCccCC
Q 000669 1046 MFVK-----SS--PGKVSILSDGS--IVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQG 1116 (1362)
Q Consensus 1046 ~~~~-----~~--~a~v~l~~DGs--v~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~ 1116 (1362)
.+.. ++ .+.|+|++||| |+|.+|++|||||++|+++|||||+||| |+|+|+|..+||+.+|++
T Consensus 454 ~~~~~~~~~~~~~~a~v~l~~dGsv~v~v~~g~~d~GQG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~ 525 (768)
T TIGR03196 454 GGFGEGMDDAAVAGARLELAEDGTVKIRAHFACAECGQGFLAAAEQIAMEELGC--------AAEDISIAIADTAKGPKA 525 (768)
T ss_pred ccCCCCccccCCccEEEEEeCCCCeEEEEEECCCCcCCCHHHHHHHHHHHHhCC--------CHHHEEEecCCCCCCCCC
Confidence 6543 23 78999999996 8899999999999999999999999999 999999999999999999
Q ss_pred CCCcccccccchHHHHHHHHHHHHHHHHHHHHHhhhc--------cC------------------CCCHHHHHHHHhhcC
Q 000669 1117 GTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLER--------MG------------------SVNWETLIQQAHLQS 1170 (1362)
Q Consensus 1117 ~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~--------~~------------------~~~w~~~~~~a~~~~ 1170 (1362)
++|+|||+|+++|+||++||++|++||++++++++.. ++ .++|.+++..
T Consensus 526 ~gt~~Sr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~~----- 600 (768)
T TIGR03196 526 GSSSASRGTSMSGGAIQGACAAFAAQLKARAAETAGLPAEVVEAPAENLIPGAAEIVGDKNEAALRVPLAEAAAD----- 600 (768)
T ss_pred CCCchhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhEEEeCCeeeecccceeeecCCCcceEEHHHHhcc-----
Confidence 9999999999999999999999999999887654321 11 2456666421
Q ss_pred ceeEEEEEe-cC-C---------CCCCcceeeEEE---EEEEccCCcEEEEEEEEEEecCCCCChhhhhhhhhchhHhhH
Q 000669 1171 VNLSASSLY-VP-D---------STSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGI 1236 (1362)
Q Consensus 1171 ~~l~~~~~~-~~-~---------~~~~~~~~~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~Gl 1236 (1362)
..+.+.+.| .. . +.++.+++|+|+ ||||++||+++|+|+++++|||++|||.+++||||||++|||
T Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eveVd~~tG~v~v~~~~~~~D~G~~iNp~~~~gQi~Gg~~~Gi 680 (768)
T TIGR03196 601 GPIAAETAFHDFPTSALDADVGQGDGHFAFAAAAAAAEVDVDLDLGDVKLIDCAHAIAAGPVLNPLALRGQIEGGAAMAL 680 (768)
T ss_pred ccceeeeccccCCCcccccccccCCCcccccceEEEEEEEEECCCCcEEEEEEEEEEECCCccCHHHHHHHHHHHHHHHH
Confidence 112232222 10 0 001234455655 999999999999999999999999999999999999999999
Q ss_pred HHHhhccceeCCCCccccCCCCCCCCCCCCCCCCccEEEEecCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHH
Q 000669 1237 GFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARK 1316 (1362)
Q Consensus 1237 G~al~Ee~~~d~~G~~l~~~~~~Y~iP~~~diP~~~~v~l~~~~~~p~g~~gsKgvGE~~~~~~~av~~Ai~nAi~~A~~ 1316 (1362)
|++|+|++.|| +|+++|+||++|++|++.|+|+ +++++++++ +|.+|||+||+||+++++ +++||+|||++|++
T Consensus 681 g~al~E~~~~~-~G~~~~~~~~~Y~~p~~~d~P~-~~~~~~~~~-~~~~p~G~kG~GE~~~~~---~~~AianAi~~A~G 754 (768)
T TIGR03196 681 GLALMEEAKMT-DGRVAAENFDDYLIPGIADVPD-LDFIAIEDL-MKDAPYGPKGVGEAGTCA---ATPAIIAAIHDAVG 754 (768)
T ss_pred HHHHhCCeEec-CCeECCCCcccccCCChhhCCC-eEEEEEeCC-CCCCCCCCccCcCccccc---hHHHHHHHHHHHhC
Confidence 99999999996 7999999999999999999995 999999864 678999999999999998 66699999999995
Q ss_pred hcccccCCCCCcceeccCCCCChHHHH
Q 000669 1317 QLLTWSDLDRSDITFNLEVPATMPVVK 1343 (1362)
Q Consensus 1317 ~~~~~~~~~g~~~~~~~~~P~tpe~i~ 1343 (1362)
.+++++|+|||+|+
T Consensus 755 -------------~r~~~lP~tpe~v~ 768 (768)
T TIGR03196 755 -------------CDINKLPIRPEDLL 768 (768)
T ss_pred -------------cCcccCCCChhhCC
Confidence 56789999999984
No 14
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=100.00 E-value=8.4e-112 Score=1073.92 Aligned_cols=703 Identities=27% Similarity=0.353 Sum_probs=609.4
Q ss_pred CCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCccc
Q 000669 583 YYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGC 662 (1362)
Q Consensus 583 ~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~~~ 662 (1362)
...+|+++.|.|+..||||+++|++|+. .|||+|++|||||++|++|++||.++|+++|||++|+|++|+|. ..+. .
T Consensus 3 ~~~~gr~~~R~~~~~~vtG~~~y~~d~~-~~~~~~~~~vrs~~a~a~i~~id~~ea~~~~gv~av~ta~~l~~-~~~~-~ 79 (731)
T COG1529 3 AEIIGRSVLRADGLGKVTGKGRYADDIV-APGMLYAAFVRSPYAHARIVSIDVSEAQGLPGVLAVITAEELPA-WSPV-R 79 (731)
T ss_pred cccCCCCcccccchhheeeeeheehhhc-CCCCceEEEEeccCCceEEEEechHHHhhCCCeEEEechhhCcc-cccc-c
Confidence 3579999999999999999999999997 68999999999999999999999999999999999999999983 0110 0
Q ss_pred ccCCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCHHHHHhcCCC--cccCCCc-ccccc
Q 000669 663 KSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSL--FEIFPHW-YPKQV 739 (1362)
Q Consensus 663 ~~~~~~~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~~~Al~~~~~--~~~~~~~-~~~~~ 739 (1362)
.......++|+.++|+|+||+||+|+|+|+++|++|+++|+|+| +++ |+++++++|+.++.. |+ ..|. .....
T Consensus 80 ~~~~p~~~~l~~~~v~~~G~~vA~vva~d~~~A~~aa~~v~V~y--e~l-~~~v~~~~a~~~~~~~ih~-~~n~~~~~~~ 155 (731)
T COG1529 80 VELAPADEVLARGKVRYTGEPVAAVVAEDEYQARAAAELVLVEY--EAL-PPVVDPEEALAEDAPVIHD-ELNIARDATF 155 (731)
T ss_pred cccCCcchhhccCceEEeCCeEEEEEeCCHHHHHHHHhhceeee--ccC-CCcCCHHHHhcCCCccccc-cccccccccc
Confidence 00011112788999999999999999999999999999999999 889 899999999998764 33 1122 34567
Q ss_pred CchhhhhhccccceEEEEEEeCcccCCCCCCCcEEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEccCCC
Q 000669 740 GDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGG 819 (1362)
Q Consensus 740 Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGG 819 (1362)
||.+ +|++|+++ ++.+|.++++.|.+|||++++++|+++++|++|++||+|+.++..++++|++|+++|||+++.+||
T Consensus 156 g~~~-a~a~A~~~-v~~~~~~~~~~~~~~E~~g~~a~~~d~~~lt~~~~tQ~~~~~~~~l~~~l~~p~~~vrvi~~dvGg 233 (731)
T COG1529 156 GDDD-AFAAAAVV-VEAPYKTPRKDPNPMEPHGVVAVPDDGDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISPDVGG 233 (731)
T ss_pred ccch-hhhcCcEE-eeeeeeccCcCccCcccccceeeEcCCCeEEEEEccCCchHHHHHHHHHhCCCHHHeEEecCCCCc
Confidence 7888 99999986 999999999999999999999999933389999999999999999999999999999999999999
Q ss_pred CCCCccCcccccccchhhhhhhhhHHHHHHHHHHhcCCCEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCcEEEEEEEE
Q 000669 820 GFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNI 899 (1362)
Q Consensus 820 gFG~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gRPVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~ 899 (1362)
|||+|..... ....++++|+++||||||+++|+|.|..+.+||+...++++++++||+|+++.+++
T Consensus 234 gfG~K~~~~~--------------~~~~~~~aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~ 299 (731)
T COG1529 234 GFGSKGVVYV--------------EEILAALAAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTV 299 (731)
T ss_pred ccCCccccee--------------HHHHHHHHHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeE
Confidence 9999986532 34556788999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCc-hhhHHhhccCCCCcCCcEEEEEEEeecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 000669 900 LIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRS 978 (1362)
Q Consensus 900 ~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~R~ 978 (1362)
+.|.|+|. +. ..........++|.|+|.++..+.++||++|+++|||+|.++++|+.|++||++|++|||||+|||+
T Consensus 300 ~~~~Gay~--~~~~~~~~~~~~~g~Y~i~~~~~~~~~v~tn~~p~~~~Rg~g~~~~~~a~E~~~d~lA~~Lgidp~eiR~ 377 (731)
T COG1529 300 AADTGAYN--GPTVPAAAAGLARGPYKIEAVYIEPYLVHTNMPPNGAYRGAGRPEGTFALERAVDELAEELGIDPVEIRL 377 (731)
T ss_pred EecCCCcc--ccchhHHHHHhcCCceecccceeeeEEEEcCCCCCcccccCCCchhHHHHHHHHHHHHHHhCCCHHHHhh
Confidence 99999997 33 2333445677999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCccccccCCCCCcccC-CHHHHHHHHHHhCCchhHHHHHHHHhhcCCCceeeeeeeeeEeecccCC-CcEEEE
Q 000669 979 INLHTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVKS-SPGKVS 1056 (1362)
Q Consensus 979 ~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGi~~a~~~~~~~~~~-~~a~v~ 1056 (1362)
+|+...|++. .+..++. ++.+|+++++++++|.+|.....+.++ ....+|+|+++..+.....+ ..+.|+
T Consensus 378 ~n~~~~g~~~------~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~re--~~~~~G~g~a~~~~~~~~~~~~~a~v~ 449 (731)
T COG1529 378 RNLIRGGPFG------LGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTRE--GDLRRGVGRAMYTEPSGAGPGEGARVR 449 (731)
T ss_pred hhccccCCCC------CcccccCccHHHHHHHHHHhcCcccccCChhhhhc--CCeeeeeEEEEEEEeccCCCCCcEEEE
Confidence 9999876542 2444444 899999999999999875444333322 23467888888888888776 779999
Q ss_pred EcCCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCcccccccchHHHHHHHH
Q 000669 1057 ILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCC 1136 (1362)
Q Consensus 1057 l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac 1136 (1362)
++.||+++|.+|..++|||++|.++|++|+.||| |.++|+|+.+||+..+.+++|+|||++.+.+.|++.||
T Consensus 450 ~~~~g~v~v~~g~~~~G~G~~t~~~q~~ae~lgi--------p~~~V~v~~gDt~~~~~~~~s~GS~~~~~~~~A~~~a~ 521 (731)
T COG1529 450 LEADGTVTVRTGATDIGQGTDTVLAQIAAEELGI--------PPDDVEVVHGDTDVPVGGWGSVGSRGTAVAGSAVIDAA 521 (731)
T ss_pred EcCCCcEEEEECCccCCCcHHHHHHHHHHHHhCC--------CHHHEEEEecCCCCCCCCCCCcCcccccchHHHHHHHH
Confidence 9999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhc--------cC-----------CCCHHHHHHHHhhcCceeEEEEEecCCCCCCcceeeEEEEEE
Q 000669 1137 NVLVERLSALRGRLLER--------MG-----------SVNWETLIQQAHLQSVNLSASSLYVPDSTSIHYLNYGAAVEV 1197 (1362)
Q Consensus 1137 ~~L~~rl~~~~~~~~~~--------~~-----------~~~w~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~a~VEV 1197 (1362)
++|++|+...+..++.. .+ .++|.+....+... .+.....|...+ .++|.++.++|||
T Consensus 522 ~~l~~k~~~~aa~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~-~~~~~A~~~EV~V 598 (731)
T COG1529 522 AKLAEKDPVAAARMLGADAEDVVLEDGAFKVGGGDRRSAVSLKEVAGKGLAP--GLAVAASFGSDN-TYPYGAHIAEVEV 598 (731)
T ss_pred HHHHHHHHHHHHhhhCCChhHeeeccCeeeeccCCccceeeHHHhhhccccC--cccccccccccc-cccceeEEEEEEE
Confidence 99999987766554411 11 03566665543222 233333443322 3445556666999
Q ss_pred EccCCcEEEEEEEEEEecCCCCChhhhhhhhhchhHhhHHHHhhccceeCCCCccccCCCCCCCCCCCCCCCCccEEEEe
Q 000669 1198 NLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEIL 1277 (1362)
Q Consensus 1198 D~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~al~Ee~~~d~~G~~l~~~~~~Y~iP~~~diP~~~~v~l~ 1277 (1362)
|++||++||+|+++++|||++|||++++|||+||++||||++|+|+..||++|+++|.||.||.||++.|+|+ ++|+++
T Consensus 599 d~~tG~vrV~r~~~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d~~g~~~~~n~~dY~ip~~~d~P~-iev~~v 677 (731)
T COG1529 599 DPETGEVRVLRVVAVDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDEDGQLLNSNLADYGIPRAADAPE-VEVEFV 677 (731)
T ss_pred ECCCCcEEEEEEEEEEecCCccCHHHHHHHHHhHHHHHHHHHhhccceECCCCCcCCCCcccccCCCcccCCc-eEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 999999
Q ss_pred cCCCCCCCCCCCCccCCCCccchhhHHHHHHHHHHHHHHhcccccCCCCCcceeccCCCCChHHHHHHcC
Q 000669 1278 NSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDITFNLEVPATMPVVKELCG 1347 (1362)
Q Consensus 1278 ~~~~~p~g~~gsKgvGE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g~~~~~~~~~P~tpe~i~~a~~ 1347 (1362)
+++ +|.+|+|+||+||+++++ +++||+|||++|++ .+++++|+|||+|+.++.
T Consensus 678 ~~p-~~~~p~g~kGvGE~g~~~---~~pAvaNAV~~AtG-------------kri~~lP~tp~~i~~al~ 730 (731)
T COG1529 678 ESP-SPFGPLGAKGVGEGGIIG---IAPAIANAVFDATG-------------KRIRDLPITPERILAALR 730 (731)
T ss_pred cCC-CCCCCCCCCCcCcCccCc---hhHHHHHHHHHHhC-------------CccccCCCCHHHHHHhhh
Confidence 998 888999999999999998 66699999999996 557899999999999875
No 15
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.1e-105 Score=875.49 Aligned_cols=449 Identities=26% Similarity=0.441 Sum_probs=393.4
Q ss_pred CCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
+|+.|||-||| +..+|||||+||+||+||||||+|++..+.. .+.+++||+||.++.++||++|+|||+|+.+++
T Consensus 24 ~P~~TlLd~LR----~d~~ltGtKEGCAEGDCGACTVlVgrl~~g~-~l~yeSVNACirfl~sL~G~hvvTvE~L~~~~g 98 (493)
T COG4630 24 PPTTTLLDYLR----LDRRLTGTKEGCAEGDCGACTVLVGRLVDGG-SLRYESVNACIRFLGSLDGTHVVTVEHLRGQDG 98 (493)
T ss_pred CcchHHHHHHH----HhcccccccccccCCCcCceEEEEEeecCCC-ceeeeehhHHHHHHhhcCCceEEEehhhcCCCC
Confidence 79999999999 3467789999999999999999999886542 389999999999999999999999999998777
Q ss_pred CccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHHh
Q 000669 87 GFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166 (1362)
Q Consensus 87 ~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~~ 166 (1362)
.||||||+|+++|||||||||||||||||+|+.+ .+.| +++.|+++|+||||||||||||++|....+
T Consensus 99 ~LHpVQqamvd~hGSQCGfCTPGFVmSLyal~~~-----~~~P-------~~a~i~kALqGNLCRCTGY~pI~~AA~~~~ 166 (493)
T COG4630 99 TLHPVQQAMVDFHGSQCGFCTPGFVMSLYALWMN-----SPTP-------SRAAIEKALQGNLCRCTGYRPIIRAAEAIA 166 (493)
T ss_pred CcCHHHHHHHhccCCccCCcCchHHHHHHHHHhc-----CCCC-------chhHHHHHhhCCcccccCchHHHHHHHHHh
Confidence 7999999999999999999999999999999954 3555 489999999999999999999999998775
Q ss_pred hcccccccCCCcccCCCCCCCCCCCCCCCCCC--CCCCCcCCchhh-ccccccccccC-CceEEecCCHHHHHHHHHccc
Q 000669 167 ADVDIEDLGFNSFWGKGESKEVKPSRLPPCKR--NGDIFTFPQFRK-KENKSWMLLDV-KGSWHNPISVQELQNLLESHE 242 (1362)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~fp~~l~-~~~~~~~~~~~-~~~~~~P~sl~eal~ll~~~~ 242 (1362)
.-... ..|.|..- ++ +-+ .|. ......+.+.+ .-.++.|.+++++..+++
T Consensus 167 a~~~~-------------------a~fDPl~~~R~~---~~~-~L~A~~~~e~v~~~~~~~r~~~P~~l~D~a~l~a--- 220 (493)
T COG4630 167 ALGPA-------------------AGFDPLAARRTA---ITA-RLRALRDTETVEVGSGDDRFIVPATLADFADLLA--- 220 (493)
T ss_pred ccCCc-------------------ccCChhhhhHHH---HHH-HHhhccCCcEEEecCCCceeEeeccHHHHHHHHh---
Confidence 32100 00111000 00 000 000 00011233444 678999999999999999
Q ss_pred CCCCCCeEEEecCcccccc--cccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHHHHHHhhhcccchhhhhHH
Q 000669 243 DNNQTSIKLVVGNTGMGYY--KEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFR 320 (1362)
Q Consensus 243 ~~~~~~a~lvaGgT~l~v~--k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~~~~~~~~~~~~~~~~~p 320 (1362)
++|++++|||+||++++ |.......+|-+++|+||+.|++..+.|+|||++||++....+.. .+|
T Consensus 221 --a~P~AtivAGsTDvgLwVtk~mr~l~~vi~v~~l~eL~~i~~~~~~l~iGAgvt~t~a~~~la~-----------~~P 287 (493)
T COG4630 221 --AHPGATIVAGSTDVGLWVTKQMRDLNPVIFVGHLAELRRIEVSTGGLEIGAGVTYTQAYRALAG-----------RYP 287 (493)
T ss_pred --hCCCCEEEecCcchhhHHHHHHhhcCCeEEecchhhhheeeecCCcEEEccCccHHHHHHHHHh-----------hCc
Confidence 47999999999999983 444567789999999999999999999999999999999998776 599
Q ss_pred HHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCceEEEehhhhhc---CCCCCCCceEEE
Q 000669 321 KIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFLE---RPPLDCRSVLLS 397 (1362)
Q Consensus 321 ~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g~R~vpl~dF~~---~~~l~~~EiI~~ 397 (1362)
.|.+...+|||.||||+|||||||+|+||+ .|.+|+|+||||+|+|++.++.|++|++|||. +.++.|||+|.+
T Consensus 288 ~l~~L~~r~gg~qvRN~gTlGGNIangSPI---GDtPPaLIALgA~ltLr~g~~~RtlPLe~~Fi~Y~kqdr~pGEfVe~ 364 (493)
T COG4630 288 ALGELWDRFGGEQVRNMGTLGGNIANGSPI---GDTPPALIALGATLTLRSGDGRRTLPLEDYFIAYGKQDRQPGEFVEA 364 (493)
T ss_pred hHHHHHHHhcchhhhccccccccccCCCcC---CCCCchhhhcCcEEEEEecCCcccccHHHHHHHhhhhccCcchhhhh
Confidence 999999999999999999999999999999 89999999999999999999999999999996 568999999999
Q ss_pred EEecCCCCCCCCcccccccceeeeeeeccCCCCCccceeEEEEEEEEccCCCCCCceeeeeEEEEcccCCCCcccHHHHH
Q 000669 398 IEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFGAFGTKHAIRARRVE 477 (1362)
Q Consensus 398 I~iP~~~~~~~~~~~~~~~~~~~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E 477 (1362)
++||.+.+ ...|.+||++|| ++.|||.|.+||.++++ +++|.++||+||||+.+ |+|+.++|
T Consensus 365 v~vP~~~~----------~~rfa~yKisKR-rdeDISAv~~Af~l~Ld------g~~V~~arIa~GGmAaT-PkRA~~~E 426 (493)
T COG4630 365 VRVPLPAP----------SERFAAYKISKR-RDEDISAVCGAFALDLD------GGRVADARIAFGGMAAT-PKRASEVE 426 (493)
T ss_pred eecCCCCc----------chhhhhhhhhhh-ccchHHHHHhHheeeec------CCeeeeeeeecCccccC-ccchHHHH
Confidence 99999986 577899999999 69999999999999997 46999999999999999 99999999
Q ss_pred HHHcCCCCCHHHHHHHHHHHhccccccCCC-CCHHHHHHHHHHHHHHHHHHhhhhh
Q 000669 478 EFLTGKLLSFDVLYEAIILLRDTVVAEVGT-PNPAYRSSLAVGFLFEFFSSLTETN 532 (1362)
Q Consensus 478 ~~L~Gk~~~~~~l~~a~~~l~~~~~p~~d~-~s~~YR~~la~~L~~r~l~~~~~~~ 532 (1362)
++|.||+|++++++.|++++..+++|.+|+ +|++||..+++|+++|||++.....
T Consensus 427 aAL~Gk~wteatve~A~aAl~~D~tPltD~RAsaeYR~l~a~nlL~RfflEt~~~~ 482 (493)
T COG4630 427 AALLGKPWTEATVEAAAAALAGDFTPLTDMRASAEYRALTAKNLLRRFFLETQGEA 482 (493)
T ss_pred HHHcCCCccHHHHHHHHHHHhcCCCcccchhhhHHHHHHHHHHHHHHHhhhccCCc
Confidence 999999999999999999999999999998 8999999999999999999877654
No 16
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=100.00 E-value=5.4e-101 Score=957.80 Aligned_cols=507 Identities=34% Similarity=0.460 Sum_probs=409.6
Q ss_pred cccccCchhhhhhccccceEEEEEEeCcccCCCCCCCcEEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEE
Q 000669 735 YPKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVIT 814 (1362)
Q Consensus 735 ~~~~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~dg~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~ 814 (1362)
...+.||++++|++|+++ ||++|++|+|+|++|||++|+|+|+++|+|+||++||+|+.+|..||++||||++||||+.
T Consensus 16 ~~~~~GDve~af~~a~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~~tQ~p~~~r~~va~~lglp~~~V~V~~ 94 (547)
T PF02738_consen 16 RHIERGDVEAAFAEADHV-VEAEYRTPRQAHAPMEPHGAVAWWDEDGRLTVWSSTQWPFHVRRAVAEALGLPPEKVRVIS 94 (547)
T ss_dssp EEEEESSHHHHHHHTSEE-EEEEEEE-BB----SS-SEEEEEEETTTEEEEEES-SSHHHHHHHHHHHHTS-GGGEEEEE
T ss_pred cccccCCHHHHHhhCCEE-EEEEEEECCccccCCCCCeEEEEEccCCCEEEEECCcCHhHHHHHHhhhhcCChhHEEEee
Confidence 357899999999999985 9999999999999999999999999678999999999999999999999999999999999
Q ss_pred ccCCCCCCCccCcccccccchhhhhhhhhHHHHHHHHHHhcCCCEEEEeCHHHHHhhcCCCCcEEEEEEEeeCCCCcEEE
Q 000669 815 RRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITA 894 (1362)
Q Consensus 815 ~~vGGgFG~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~gRPVkl~~tReed~~~~~~R~~~~~~~k~g~~~dG~i~a 894 (1362)
+++|||||.|.. ... +++.||++|+++||||||+|||+|+|+.+.+||++.+++|+|+|+||+|+|
T Consensus 95 ~~~GGgFG~~~~-~~~-------------~~~~aa~~a~~~grPVk~~~tR~e~~~~~~~r~~~~~~~~~g~~~dG~i~a 160 (547)
T PF02738_consen 95 PYVGGGFGKKKQ-DSP-------------IAVLAALAAKKTGRPVKLVWTREEDFRAGPKRPPTRIRVRAGADKDGKITA 160 (547)
T ss_dssp SB-S--TTTTSS-THH-------------HHHHHHHHHHHHSSEEEEE--HHHHHHHS-BB-EEEEEEEEEE-TTS-EEE
T ss_pred eecCCCCCCccc-cch-------------HHHHHHHHHhccCceEEEEechHHhcCCCCCccHHHhhhhheECCCCCEEE
Confidence 999999994432 223 678899999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCc-hhhHHhhccCCCCcCCcEEEEEEEeecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCH
Q 000669 895 LQLNILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEV 973 (1362)
Q Consensus 895 ~~~~~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP 973 (1362)
++++++.|+|+|.+++. +....+....++|+|||++++++.|+||++|.++|||||.+|+.|++|++||++|++|||||
T Consensus 161 ~~~~~~~d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~g~~Rg~G~~q~~fa~E~~~DelA~~lg~DP 240 (547)
T PF02738_consen 161 LDHDIYADGGAYASFSPAVAPRAGAGADGPYRIPNVRIDARAVYTNTPPAGAFRGFGAPQAAFALESFMDELAEKLGMDP 240 (547)
T ss_dssp EEEEEEEEEESS-TTHHHHHHHHHHTTTTTB--SEEEEEEEEEE-SSSSBE-STTTTHHHHHHHHHHHHHHHHHHHTS-H
T ss_pred eeeeeeccCCccccccccchhhhhcccCCCcccccEEEEEEeccCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHhCcCh
Confidence 99999999999998875 45556667789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCCccccccCCCCCcccC-CHHH-HHHHHHHhCCchhHHHHHHHHhhcCCCceeeeeeeeeEeecccCC-
Q 000669 974 DFVRSINLHTRNSLNLFYESSAGEHAEY-TIPL-MWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVKS- 1050 (1362)
Q Consensus 974 ~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~-~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGi~~a~~~~~~~~~~- 1050 (1362)
+|||++|+.+.++. ++.|..+++ .+.+ ||+++++.++|.+|.+..+.++..++|++||+|+++..++.++..
T Consensus 241 ~e~R~~N~~~~~~~-----~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gig~~~~~~~~~~~~~ 315 (547)
T PF02738_consen 241 LEFRLKNLIDPGDR-----TPTGQPYDSGDYPEDCLEKAAEHSGWRRRQKEVREFGSGNGWRGRGIGLGCAMYGSGTGGG 315 (547)
T ss_dssp HHHHHHHB-GTTEB------TTS-BETS--HHHHHHHHHHHHHCHHHHHHHHHHCCHEESSEEEEEEEEEEEEEESTTSG
T ss_pred HHHHHhcccccccc-----cccCcccccCcHHHHHHHHHHhhhchhhhhhHHhhccccccccccccCCCccccccccccc
Confidence 99999999976643 345666554 7887 999999999999999888888888899999999999988877653
Q ss_pred ----CcEEEEEcCCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCccccccc
Q 000669 1051 ----SPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSE 1126 (1362)
Q Consensus 1051 ----~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~gS~~t~ 1126 (1362)
+++.|+|++||+|+|.+|.+|||||++|+++||+||+||| |+|+|+|..+||+.+|++++|+|||+|.
T Consensus 316 ~~~~~~a~v~l~~DG~v~v~~~~~e~GqG~~T~~~qiaAe~Lgi--------~~~~V~v~~~dT~~~p~~~~t~gSr~t~ 387 (547)
T PF02738_consen 316 SGDQSSARVRLNPDGSVTVYTGGVEMGQGSRTALAQIAAEELGI--------PPEDVRVVSGDTDTTPYDGGTGGSRSTY 387 (547)
T ss_dssp GGSEEEEEEEE-TTS-EEEEES--BSSSSHHHHHHHHHHHHHTS---------GGGEEEEECBTTTS-SB--S-TTTHHH
T ss_pred cccCCcEEEEEEeCCCEEEEEecccCCcchhhhHHHHHHHHhCC--------ChhhEEEEeCCCcCCCCCCCCccchhhH
Confidence 5799999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCHHHH--HHHHhhcCceeEEEEEecCC-----------CCCCcceeeE
Q 000669 1127 SSCEAVRLCCNVLVERLSALRGRLLERM-GSVNWETL--IQQAHLQSVNLSASSLYVPD-----------STSIHYLNYG 1192 (1362)
Q Consensus 1127 ~~g~Av~~Ac~~L~~rl~~~~~~~~~~~-~~~~w~~~--~~~a~~~~~~l~~~~~~~~~-----------~~~~~~~~~~ 1192 (1362)
++|+|+++||++||+||+++++.++... ..+.|++- ........+.+.+...+... ...+.+++|+
T Consensus 388 ~~g~Av~~Aa~~lr~~l~~~Aa~~~~~~~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (547)
T PF02738_consen 388 MSGNAVRKAAEDLREKLLEIAAEILGVDPEDLELEDGRVISPAKGVSISEAAIAAYANPPTGFDPGTGGYGPPASYYSFG 467 (547)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSGGGEECHCHETHHHHHHEEHHHEEEHHHCTTSTTCETTTTEESBSSSEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhhccccccccccccccccccccccccccccccccccCCccceeee
Confidence 9999999999999999999998876432 23445443 32222222222222111110 1234556676
Q ss_pred EE---EEEEccCCcEEEEEEEEEEecCCCCChhhhhhhhhchhHhhHHHHhhccceeCCCCccccCCCCCCCCCCCCCCC
Q 000669 1193 AA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIP 1269 (1362)
Q Consensus 1193 a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~al~Ee~~~d~~G~~l~~~~~~Y~iP~~~diP 1269 (1362)
++ ||||++||+++|+|+++++|||++|||..++||||||++||||++|+|++.||++|+++|+||++|++|++.|+|
T Consensus 468 a~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~~Glg~al~E~~~~d~~G~~~~~~~~dY~ip~~~d~P 547 (547)
T PF02738_consen 468 AHFAEVEVDTETGEVRVLRVVAAHDCGRVINPDIVEGQIEGGIVQGLGYALYEELVYDENGRPLNPNFADYKIPTAADVP 547 (547)
T ss_dssp EEEEEEEEETTTSEEEEEEEEEEEEEBS-SBHHHHHHHHHHHHHHHHHHHHT--BEBTTTSEBSTSSTTTST---GGGS-
T ss_pred eeecccccccccccccceeeeeeccCCcccCHHHHhhhccccHHHHHHHHhcCCeEECCCCcCCCCChhhCcCCCccccC
Confidence 66 999999999999999999999999999999999999999999999999999998899999999999999999998
No 17
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and
Probab=100.00 E-value=9.8e-100 Score=915.87 Aligned_cols=444 Identities=28% Similarity=0.458 Sum_probs=391.7
Q ss_pred CCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
.|+.+||.+||+.++ |||||.||++|+||||||+|+++|+.+ ++.+++||||++|+++++|++|+|||||++.++
T Consensus 16 ~~~~~ll~~lR~~~~----l~g~k~gC~~G~CGaCtv~~~~~~~~~-~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 90 (467)
T TIGR02963 16 DPTRTLLDYLREDAG----LTGTKEGCAEGDCGACTVVVGELVDGG-KLRYRSVNACIQFLPSLDGKAVVTVEDLRQPDG 90 (467)
T ss_pred CCCCCHHHHHHHhcC----CCCCCcccCCCCCCceEEEEEecCCCC-cccceEEehhhhhHHhcCCCEEEecCCCCCCCC
Confidence 588999999999655 559999999999999999999998665 888999999999999999999999999986456
Q ss_pred CccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHHh
Q 000669 87 GFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166 (1362)
Q Consensus 87 ~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~~ 166 (1362)
.|||||++|+++|++|||||||||||++++||++ +|+| |++||+++|+|||||||||++|++|++. +
T Consensus 91 ~l~~~q~a~~~~~~~QCG~CtpG~vm~~~~ll~~-----~~~~-------~~~~i~~~l~gnlCRCtgy~~i~~a~~~-~ 157 (467)
T TIGR02963 91 RLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKN-----SPAP-------SRADIEDALQGNLCRCTGYRPILDAAEA-A 157 (467)
T ss_pred CCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHhc-----CCCC-------CHHHHHHHhcCCcccCCCCHHHHHHHHH-H
Confidence 8999999999999999999999999999999954 4666 5999999999999999999999999954 4
Q ss_pred hcccccccCCCcccCCCCCCCCCCCCCCCCCCCCCCCcCCchhhccccccccccC-CceEEecCCHHHHHHHHHcccCCC
Q 000669 167 ADVDIEDLGFNSFWGKGESKEVKPSRLPPCKRNGDIFTFPQFRKKENKSWMLLDV-KGSWHNPISVQELQNLLESHEDNN 245 (1362)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fp~~l~~~~~~~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~ 245 (1362)
.+.. | +++|++.++. +||.........++.+.+ +.+||+|+||+||+++|++
T Consensus 158 ~~~~--------~-------------~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~P~sl~Ea~~ll~~----- 210 (467)
T TIGR02963 158 FDYP--------C-------------SDPLDADRAP-IIERLRALRAGETVELNFGGERFIAPTTLDDLAALKAA----- 210 (467)
T ss_pred HhCC--------C-------------CCcCCcchhh-hhhHHHhcCCCcceeecCCCceEECCCCHHHHHHHHhh-----
Confidence 3310 1 2344554432 564432211223344544 6799999999999999995
Q ss_pred CCCeEEEecCccccc-cccc-CCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHHHHHHhhhcccchhhhhHHHHH
Q 000669 246 QTSIKLVVGNTGMGY-YKEV-EHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIA 323 (1362)
Q Consensus 246 ~~~a~lvaGgT~l~v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~~~~~~~~~~~~~~~~~p~L~ 323 (1362)
+++++++||||++++ ++.+ ..++++|||++|+||+.|+.++++|+|||+|||+++.+.+.. .+|.|+
T Consensus 211 ~~~a~lvAGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vT~~el~~~l~~-----------~~p~L~ 279 (467)
T TIGR02963 211 HPDARIVAGSTDVGLWVTKQMRDLPDVIYVGQVAELKRIEETDDGIEIGAAVTLTDAYAALAK-----------RYPELG 279 (467)
T ss_pred CCCCEEEecCcchHHHHhcCCCCCCeEEECCCChhhccEEEcCCEEEEecCCcHHHHHHHHHH-----------HhHHHH
Confidence 578999999999988 4443 578999999999999999999999999999999999876654 589999
Q ss_pred HHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCceEEEehhhhhcC---CCCCCCceEEEEEe
Q 000669 324 EHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFLER---PPLDCRSVLLSIEI 400 (1362)
Q Consensus 324 ~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g~R~vpl~dF~~~---~~l~~~EiI~~I~i 400 (1362)
+++++|||+||||+|||||||++++|+ ||++|+|+||||+|+|.+.+|+|+||++|||.+ +.|+++|||++|+|
T Consensus 280 ~a~~~ias~qIRN~aTiGGNI~~asP~---sD~~p~LlALdA~v~l~~~~G~R~vpl~dF~~g~~kt~L~~~EiI~~I~i 356 (467)
T TIGR02963 280 ELLRRFASLQIRNAGTLGGNIANGSPI---GDSPPALIALGARLTLRKGEGRRTLPLEDFFIDYGKTDRQPGEFVEALHV 356 (467)
T ss_pred HHHHHhCCHHHcCceecccccccCCCc---hHHHHHHHHcCCEEEEEcCCCcEEEeHHHhhcccccccCCCCceEEEEEe
Confidence 999999999999999999999999999 999999999999999999999999999999974 58999999999999
Q ss_pred cCCCCCCCCcccccccceeeeeeeccCCCCCccceeEEEEEEEEccCCCCCCceeeeeEEEEcccCCCCcccHHHHHHHH
Q 000669 401 PYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFGAFGTKHAIRARRVEEFL 480 (1362)
Q Consensus 401 P~~~~~~~~~~~~~~~~~~~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L 480 (1362)
|.+.. +..+.+||+++| +++|||+||+|+.++++ +++|+++||+|||++++ |+|++++|++|
T Consensus 357 P~~~~----------~~~~~~~K~~~R-~~~dia~V~~A~~v~~~------~~~i~~~ria~Ggva~~-p~r~~~~E~~L 418 (467)
T TIGR02963 357 PRPTP----------GERFRAYKISKR-FDDDISAVCAAFNLELD------GGVVAEIRIAFGGMAAT-PKRAAATEAAL 418 (467)
T ss_pred cCCCC----------CCceEEEEeccc-ccccceeeEEEEEEEEc------CCeEeEEEEEEecCCCC-ceehHHHHHHh
Confidence 97654 345678999999 69999999999999996 46899999999999999 99999999999
Q ss_pred cCCCCCHHHHHHHHHHHhccccccCCC-CCHHHHHHHHHHHHHHHHHH
Q 000669 481 TGKLLSFDVLYEAIILLRDTVVAEVGT-PNPAYRSSLAVGFLFEFFSS 527 (1362)
Q Consensus 481 ~Gk~~~~~~l~~a~~~l~~~~~p~~d~-~s~~YR~~la~~L~~r~l~~ 527 (1362)
.|++|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.+
T Consensus 419 ~G~~~~~~~l~~a~~~l~~~~~p~~d~r~sa~YR~~la~~l~~r~~~~ 466 (467)
T TIGR02963 419 LGKPWNEATVEAAMAALAGDFTPLSDMRASAEYRLLTAKNLLRRFFLE 466 (467)
T ss_pred cCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999886 89999999999999999876
No 18
>PRK09971 xanthine dehydrogenase subunit XdhB; Provisional
Probab=100.00 E-value=6e-52 Score=475.75 Aligned_cols=274 Identities=22% Similarity=0.277 Sum_probs=248.5
Q ss_pred eEEecCCHHHHHHHHHcccCCCCCCeEEEecCccccc-cccc-CCCCeeEeCCCCCCCcceeec-CCeEEecccccHHHH
Q 000669 224 SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGY-YKEV-EHYDKYIDIRYIPELSMIRRD-ETGIEIGATVTISKA 300 (1362)
Q Consensus 224 ~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~-~~~~~lIdl~~I~EL~~I~~~-~~~l~IGA~vTl~~l 300 (1362)
+|++|+|++||+++|++ .+++++++|||+|++ ++.+ ..|+++|||++|+||+.|+.. +++|+|||+|||+++
T Consensus 6 ~~~~P~sl~Ea~~ll~~-----~~~a~ivaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~I~~~~~~~l~IGA~vt~~~l 80 (291)
T PRK09971 6 EYHEAATLEEAIELLAD-----NPQAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDGSIRIGAATTFTQI 80 (291)
T ss_pred ceeCCCCHHHHHHHHHh-----CCCCEEEeccchHHHHHhCCCCCCCeEEEcCCChhhhCeEecCCCEEEEEeCCcHHHH
Confidence 89999999999999995 478999999999988 5554 678999999999999999964 567999999999999
Q ss_pred HHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCceEEEeh
Q 000669 301 IESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFML 380 (1362)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g~R~vpl 380 (1362)
+++... ...+|.|.+++++||++||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|++|+
T Consensus 81 ~~~~~i---------~~~~p~L~~a~~~ia~~qIRN~aTiGGNi~~a~p~---sD~~~~Llal~A~v~i~~~~g~R~vp~ 148 (291)
T PRK09971 81 IEDPII---------QKHLPALAEAAVSIGGPQIRNVATIGGNICNGATS---ADSAPPLFALDAKLEIHSPNGVRFVPI 148 (291)
T ss_pred hcChHH---------HHHhHHHHHHHHHhCCHHHhcceecccccccCCcc---hhHHHHHHHcCCEEEEEcCCCcEEEEH
Confidence 985322 13689999999999999999999999999999999 999999999999999999999999999
Q ss_pred hhhhcC---CCCCCCceEEEEEecCCCCCCCCcccccccceeeeeeeccCCCCCccceeEEEEEEEEccCCCCCCceeee
Q 000669 381 EEFLER---PPLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNN 457 (1362)
Q Consensus 381 ~dF~~~---~~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~ 457 (1362)
+|||.+ +.|.++|||++|+||.++.. +..+.+||+.+| +++|||+||+|+.++++ +++|++
T Consensus 149 ~df~~g~~~t~l~~~Eil~~I~iP~~~~~---------~~~~~~~K~~~R-~~~~~a~v~~a~~~~~~------~g~i~~ 212 (291)
T PRK09971 149 NGFYTGPGKVSLEHDEILVAFIIPPEPYE---------HAGGAYIKYAMR-DAMDIATIGCAVLCRLD------NGNFED 212 (291)
T ss_pred HHhcCCccccccCCCceEEEEEeCCCCCC---------CCceEEEEEccc-chhhHhHheeEEEEEEc------CCEEEE
Confidence 999974 58999999999999975431 234456899999 69999999999999985 468999
Q ss_pred eEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHhccccccCCC-CCHHHHHHHHHHHHHHHHHHhhhh
Q 000669 458 CQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVVAEVGT-PNPAYRSSLAVGFLFEFFSSLTET 531 (1362)
Q Consensus 458 ~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~~~p~~d~-~s~~YR~~la~~L~~r~l~~~~~~ 531 (1362)
+||+|||++++ |+|+.++|++|.|++|++++++++.+.+.+++.|.+|. +|++||++|+.+|++|++.++..+
T Consensus 213 ~ria~G~v~~~-p~r~~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~~~s~~YR~~l~~~l~~r~l~~~~~~ 286 (291)
T PRK09971 213 LRLAFGVAAPT-PIRCQHAEQTAKGAPLNLETLEAIGELVLQDVAPRSSWRASKEFRLHLIQELTKRVIKEAVAA 286 (291)
T ss_pred EEEEEEcccCc-eeeHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 99999999999999999999999999999999999986 899999999999999999988754
No 19
>TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit. This model represents the second largest chain, beta, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=100.00 E-value=4.1e-49 Score=452.02 Aligned_cols=274 Identities=19% Similarity=0.235 Sum_probs=239.7
Q ss_pred CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCccccc-cccc-CCCCeeEeCCCCCCCcceeecCCeEEecccccHHH
Q 000669 222 KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGY-YKEV-EHYDKYIDIRYIPELSMIRRDETGIEIGATVTISK 299 (1362)
Q Consensus 222 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 299 (1362)
.|+|++|+|++||+++|++ .+++++++|||+|++ ++.+ ..|+++|||++||||+.|+.++++|+|||+|||++
T Consensus 4 ~f~~~~P~sl~eA~~ll~~-----~~~a~ivaGGTdl~~~~~~~~~~p~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~~ 78 (321)
T TIGR03195 4 DFRTLRPASLADAVAALAA-----HPAARPLAGGTDLLPNLRRGLGQPETLVDLTGIDEIAQLSTLADGLRIGAGVTLAA 78 (321)
T ss_pred CceEECCCCHHHHHHHHhh-----CCCCEEEEccchHHHHHhcccCCCCeEEECCCChhhccEEecCCEEEEeccCcHHH
Confidence 5899999999999999995 478999999999988 5544 67899999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccC------------------------------
Q 000669 300 AIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQR------------------------------ 349 (1362)
Q Consensus 300 l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp------------------------------ 349 (1362)
|+++.... ..+|.|.++++.||++||||+||||||||+++|
T Consensus 79 l~~~~~i~---------~~~p~L~~a~~~ias~qIRN~aTiGGNi~~~~~c~~~~~~~~~~~~~~~c~~~~~~~c~~~~~ 149 (321)
T TIGR03195 79 LAEDALVR---------TRWPALAQAARAVAGPTHRAAATLGGNLCLDTRCIYYNQSEWWRSGNGYCLKYRGDKCHVAPK 149 (321)
T ss_pred HhhChhhH---------hHhHHHHHHHHHhCCHHHhCceecHHhhhccCCCcccccccccccccccccccCCccccccCC
Confidence 99874431 368999999999999999999999999996443
Q ss_pred -----CCCCCcHHHHHHHcCCEEEEEeCCceEEEehhhhhc--C---CCCCCCceEEEEEecCCCCCCCCccccccccee
Q 000669 350 -----KCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFLE--R---PPLDCRSVLLSIEIPYWDPSRNVTSETDNLLLF 419 (1362)
Q Consensus 350 -----~~~~sDl~~~LlAldA~v~l~s~~g~R~vpl~dF~~--~---~~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~ 419 (1362)
.+++||++|+|+||||+|+|.+.+|+|+||++|||. + +.|+++|||++|+||.... ..
T Consensus 150 ~~~c~a~p~sD~~~~LlAldA~v~i~~~~g~R~vpl~dF~~~~g~~~t~L~~~Eiit~I~iP~~~~-----------~~- 217 (321)
T TIGR03195 150 SDRCYAAFSGDVAPALLVLDAEAEIVGPAGVRRVPLAELYVEDGAAHLTLEPGEVLAAVRVPPTGG-----------WT- 217 (321)
T ss_pred CccccCCCchHHHHHHHHcCCEEEEEeCCccEEEEHHHHhcccCCccccCCCCCeEEEEEecCCCC-----------Cc-
Confidence 123489999999999999999999999999999997 2 4789999999999996532 22
Q ss_pred eeeeeccCCCCCccceeEEEEEEEEccCCCCCCceeeeeEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHhc
Q 000669 420 ETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRD 499 (1362)
Q Consensus 420 ~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~ 499 (1362)
.+|++.++|.+.+|+.+++|+.++.+ +++|+++||+|||++++ |+|++++ ++|.|+.|++++++++.+++.+
T Consensus 218 ~~y~k~~~r~a~~~~~~~vav~l~~~------~~~i~~~ria~Ggva~~-p~r~~~~-e~l~G~~~~~~~~~~a~~~~~~ 289 (321)
T TIGR03195 218 SAYSKVRVRGAIDFPLAGVAVALQRD------GDRIAGLRVALTGTNSR-PLMVPGT-DALAGRPLDDAAAEEIARLVRK 289 (321)
T ss_pred cEEEEEecCccccceeEEEEEEEEeC------CCeEEEEEEEEECccCc-eeehHHH-HHhcCCCCCHHHHHHHHHHHHh
Confidence 23444444368899999999888875 46899999999999999 9999999 5589999999999999999999
Q ss_pred cccccCCC-CCHHHHHHHHHHHHHHHHHHhh
Q 000669 500 TVVAEVGT-PNPAYRSSLAVGFLFEFFSSLT 529 (1362)
Q Consensus 500 ~~~p~~d~-~s~~YR~~la~~L~~r~l~~~~ 529 (1362)
++.|.+|. +|++||++++.+|++|++.+++
T Consensus 290 ~~~p~~d~~~s~~YRr~l~~~l~~r~~~~~~ 320 (321)
T TIGR03195 290 TSQPMRTTLMGVKYRRRVLLAIARRLVDQLW 320 (321)
T ss_pred hCCCccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999886 8999999999999999998764
No 20
>TIGR03199 pucC xanthine dehydrogenase C subunit. This gene has been characterized in B. subtilis as the FAD binding-subunit of xanthine dehydrogenase (pucC), acting in conjunction with pucD, the molybdopterin-binding subunit and pucE, the FeS-binding subunit.
Probab=100.00 E-value=5.2e-49 Score=446.10 Aligned_cols=258 Identities=19% Similarity=0.213 Sum_probs=232.8
Q ss_pred cCCHHHHHHHHHcccCCCCCCeEEEecCccccc-cccc--CCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHHHH
Q 000669 228 PISVQELQNLLESHEDNNQTSIKLVVGNTGMGY-YKEV--EHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESL 304 (1362)
Q Consensus 228 P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~--~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~~ 304 (1362)
|+||+||+++|++ +++++++||||+|++ ++.+ ..|+.+|||++|+||+.|+.++++|+|||+|||++|+++.
T Consensus 1 P~sl~ea~~ll~~-----~~~a~ivaGgT~l~~~~~~~~~~~~~~lIdi~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~~ 75 (264)
T TIGR03199 1 PAALDEAWSLLEK-----APDSTFVSGSTLLQLQWEKGTLPMKQHLVSLEGIDELKGISTSDTHVSIGALTTLNECRKNP 75 (264)
T ss_pred CCCHHHHHHHHHh-----CCCCEEEEccChHHHHHhcCcCCCCCeEEEcCCChhhCcEEecCCEEEEecCCcHHHHhhCh
Confidence 8999999999995 578999999999988 4443 3589999999999999999999999999999999999753
Q ss_pred HHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCceEEEehhhhh
Q 000669 305 KEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFL 384 (1362)
Q Consensus 305 ~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g~R~vpl~dF~ 384 (1362)
.. .+.+|.|+++++.|||+||||+||||||||++ . ||++|+|+||||+|+|.+ +|.|+||++|||
T Consensus 76 ~i---------~~~~p~L~~a~~~ia~~qIRN~aTlGGNl~~~--~---sD~~p~Llal~A~v~i~~-~g~r~vp~~~f~ 140 (264)
T TIGR03199 76 LI---------KRALPCFVDAASAIAAPGVRNRATIGGNIASG--I---GDFIPALLVLGAELIVYQ-KELIRLPLGAWL 140 (264)
T ss_pred Hh---------HhHhHHHHHHHHHhcCHHHhcceecHHhccCc--c---cchHHHHHHcCCEEEEEe-CCEEEEEHHHhh
Confidence 32 24699999999999999999999999999998 4 899999999999999999 899999999999
Q ss_pred cCCCCCCCceEEEEEe-cCCCCCCCCcccccccceeeeeeeccCCCCCccceeEEEEEEEEccCCCCCCceeeeeEEEEc
Q 000669 385 ERPPLDCRSVLLSIEI-PYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFG 463 (1362)
Q Consensus 385 ~~~~l~~~EiI~~I~i-P~~~~~~~~~~~~~~~~~~~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~G 463 (1362)
.++.|.++|||++|.| |.+.. +..+.+||+.+| +++++++||+|+.+.+++ +++|+++||+||
T Consensus 141 ~~~~l~~~Eii~~I~i~p~~~~----------~~~~~~~k~~~R-~~~~~a~v~~a~~~~~~~-----~~~i~~~ria~G 204 (264)
T TIGR03199 141 SEEDFKPTAIVTRVIIGPRAET----------GEFVFYHKVGRR-ETFTGSLVVVAGRFLLDG-----SQTIKEIRLAVG 204 (264)
T ss_pred hccCCCCCcEEEEEEEECCCCC----------CCcEEEEEEecc-chhHHHHheeeEEEEEcC-----CCeEEEEEEEee
Confidence 9889999999999999 65433 234456788877 688999999999999862 478999999999
Q ss_pred ccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHhccccccCCC-CCHHHHHHHHHHHHH
Q 000669 464 AFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVVAEVGT-PNPAYRSSLAVGFLF 522 (1362)
Q Consensus 464 gv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~~~p~~d~-~s~~YR~~la~~L~~ 522 (1362)
|++++ |+|++++|++|.|++|++++++++.+.+.+++.|.+|. +|++||++|+.+|+.
T Consensus 205 gv~~~-p~r~~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~~~s~~YR~~l~~~~~~ 263 (264)
T TIGR03199 205 GADIT-PRRLLDSEAKLMAPPWDPHLLAELYKTIIQELPFSSDPFATAAYRKKVAANVIV 263 (264)
T ss_pred cCCCc-eeeHHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHhc
Confidence 99999 99999999999999999999999999999999999986 899999999999874
No 21
>COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]
Probab=100.00 E-value=2.9e-47 Score=425.96 Aligned_cols=273 Identities=26% Similarity=0.291 Sum_probs=244.6
Q ss_pred CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCccccc-cccc-CCCCeeEeCCCCCCCcceeecCCe-EEecccccHH
Q 000669 222 KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGY-YKEV-EHYDKYIDIRYIPELSMIRRDETG-IEIGATVTIS 298 (1362)
Q Consensus 222 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~-l~IGA~vTl~ 298 (1362)
.|+|++|+|++||+.+|++ .+++++++|||+|.. +|.+ ..|.++|||++|+|+..+...+++ |+|||+||++
T Consensus 3 ~f~y~rp~Sv~eA~~ll~~-----~~~a~~laGGt~L~~~~k~~~~~p~~lVdI~~l~~~~~~~~~~g~~l~IGA~vt~~ 77 (284)
T COG1319 3 NFEYYRPASVEEALNLLAR-----APDAKYLAGGTDLLPLMKLGIERPDHLVDINGLDELLGIVTTEGGSLRIGALVTLT 77 (284)
T ss_pred ceEEECCCCHHHHHHHHHh-----CCCcEEeeCcchHHHHhhcccCCcceEEEecCChhhhceEeecCCEEEEeecccHH
Confidence 4899999999999999995 469999999999988 7765 689999999999988888777555 9999999999
Q ss_pred HHHHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCceEEE
Q 000669 299 KAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKF 378 (1362)
Q Consensus 299 ~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g~R~v 378 (1362)
+|.++... .+.+|.|.+++..|||+||||+||||||||+++|. +|++++|+||||+|++.+..|+|++
T Consensus 78 ei~~~~~~---------~~~~p~L~ea~~~ia~~qvRN~aTiGGn~c~a~p~---aD~~~aLlaLdA~v~~~~~~g~r~i 145 (284)
T COG1319 78 EIARHPAV---------RRIPPALSEAASAIASPQVRNRATIGGNLCNADPA---ADLAPALLALDAEVEIRSPGGERTI 145 (284)
T ss_pred HHHhChhh---------hhhchHHHHHHHHhcChhhcceeeecchhccCCCc---hhhHHHHHHcCCEEEEecCCccEEE
Confidence 99987533 24799999999999999999999999999999998 9999999999999999999999999
Q ss_pred ehhhhhcC---CCCCCCceEEEEEecCCCCCCCCcccccccceeeeeeeccCCCCCccceeEEEEEEEEccCCCCCCcee
Q 000669 379 MLEEFLER---PPLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMV 455 (1362)
Q Consensus 379 pl~dF~~~---~~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i 455 (1362)
|++|||.+ +.|+++||||+|+||.++.. ....||+.+|+...+++.|++|..+.. ++|
T Consensus 146 ~~~~f~~~p~~t~l~~gelit~v~lP~~~~~-----------~~~~~kk~r~r~~~~~~~vsvA~~~~~--------~~v 206 (284)
T COG1319 146 PIEDFFRGPGETALEPGELITAVILPPPPAA-----------RGAYYKKVRRRASFAIALVSVAAKLRG--------DRV 206 (284)
T ss_pred EHHHhhcCccccccCCCcEEEEEEcCCCccC-----------CccEEEEeecchhhhHHHHHHHhhhcc--------cce
Confidence 99999985 48999999999999998332 234577777767788888887776654 388
Q ss_pred eeeEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHhccccccCCC-CCHHHHHHHHHHHHHHHHHHhhhh
Q 000669 456 NNCQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVVAEVGT-PNPAYRSSLAVGFLFEFFSSLTET 531 (1362)
Q Consensus 456 ~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~~~p~~d~-~s~~YR~~la~~L~~r~l~~~~~~ 531 (1362)
+++||++||++++ |+|+.++|+.|.|+++++++++++.+.+.+++.|.+|. +|++||++|+++++.|.+.++..+
T Consensus 207 ~~~RvAlgg~a~~-p~R~~~~E~~L~~~~l~~~~~~~~~~~~~~~~~p~~d~r~s~~yr~~l~~~~~~ral~~a~~~ 282 (284)
T COG1319 207 SEARVALGGVAPK-PWRLEDAEAALLGKPLSLETLEAAAEAAMQEAAPISDVRGSAEYRRKLAKVLLARALAEAQGR 282 (284)
T ss_pred eeeeeeecccCCc-ceehHHHHHHhhCCCCChHHHHHHHHHhhcccCCcccccchHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999 99999999999999999999999999999999999986 999999999999999999988754
No 22
>PRK09799 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.5e-45 Score=413.05 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=218.9
Q ss_pred eEEecCCHHHHHHHHHcccCCCCCCeEEEecCccccc-ccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHH
Q 000669 224 SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGY-YKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIE 302 (1362)
Q Consensus 224 ~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 302 (1362)
+|++|+|++|++++|+++ .++++++||||+|++ ++. ..|+.+|||++| ||+.|+.++++|+|||+|||+++.+
T Consensus 4 ~y~~P~sl~Ea~~ll~~~----~~~a~ilAGGT~L~~~~~~-~~~~~lIdi~~i-eL~~I~~~~~~l~IGA~vT~~~l~~ 77 (258)
T PRK09799 4 QFFRPDSVEQALELKRRY----QDEAVWFAGGSKLNATPTR-TDKKIAISLQDL-ELDWIEWDNGALRIGAMSRLQPLRD 77 (258)
T ss_pred cEeCCCCHHHHHHHHHhC----CCCCEEEecCCChHhhhCC-CCCCEEEEcCCC-CCCeEEecCCEEEEccCCcHHHHHh
Confidence 799999999999999964 357999999999987 433 568899999999 9999999999999999999999988
Q ss_pred HHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCceEEEehhh
Q 000669 303 SLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEE 382 (1362)
Q Consensus 303 ~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g~R~vpl~d 382 (1362)
+.. ..+.|.++++.|||+||||+||||||||+++|. ||++|+|+||||+|+|.+. |++|++|
T Consensus 78 ~~~------------~~~~L~~a~~~vas~qIRN~aTiGGNl~~a~p~---sD~~p~LlAldA~v~l~~~---r~vpl~~ 139 (258)
T PRK09799 78 ARF------------IPAALREALGFVYSRHLRNQSTIGGEIAARQEE---SVLLPVLLALDAELVFGNG---ETLSIED 139 (258)
T ss_pred Ccc------------cHHHHHHHHHHhCCHHHhccchhHHHhhcCCcc---HHHHHHHHHcCCEEEEecC---cEEeHHH
Confidence 632 124899999999999999999999999999998 9999999999999999884 8999999
Q ss_pred hhcCCCCCCCceEEEEEecCCCCCCCCcccccccceeeeeeeccCCCCCccceeEEEEEEEEccCCCCCCceeeeeEEEE
Q 000669 383 FLERPPLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAF 462 (1362)
Q Consensus 383 F~~~~~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~ 462 (1362)
||.+. ++|||++|+||.+.. .+.+||+. | +.+|+|+||+|+.++++. .+||+|
T Consensus 140 f~~g~---~~Eil~~I~iP~~~~------------~~~~~K~~-r-~~~~~a~v~~A~~~~~~~----------~~ria~ 192 (258)
T PRK09799 140 YLACP---CDRLLTEIIIPDPYR------------TCATRKIS-R-SQAGLTVVTAAVALTDHD----------GMRIAL 192 (258)
T ss_pred hcCCC---CCcEEEEEEcCCCCC------------cceEEEec-c-cccChhhheeEEEEEEcC----------CeEEEE
Confidence 99874 799999999996532 22346775 6 589999999999998851 389999
Q ss_pred cccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHhccccccCCC-CCHHHHHHHHHHHHHHHHHHhhhh
Q 000669 463 GAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVVAEVGT-PNPAYRSSLAVGFLFEFFSSLTET 531 (1362)
Q Consensus 463 Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~~~p~~d~-~s~~YR~~la~~L~~r~l~~~~~~ 531 (1362)
||++++ |+|++++|+ ++++++++.++ +.+++.|.+|. +|++||++++.+|+.|+|.++.+.
T Consensus 193 Ggv~~~-p~r~~~~E~----~~~~~~~~~~a---~~~~~~p~~d~~~s~~YR~~~~~~l~~r~l~~~~~~ 254 (258)
T PRK09799 193 DGVASK-PLRLHDVEK----QNLEGNALEQA---VANAIFPQEDLRGSVAYKRYIAGVLVADLYADCQQA 254 (258)
T ss_pred ECCCCc-ccchHHHhc----CCCCHHHHHHH---HHhcCCCCccCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999998 88999888876 44788998886 899999999999999999988764
No 23
>TIGR03193 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamma subunit. 4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme.
Probab=100.00 E-value=2.9e-46 Score=376.75 Aligned_cols=133 Identities=34% Similarity=0.572 Sum_probs=123.0
Q ss_pred CCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
.|..+||.+||+++ +|||||.||++|+||||||+| |+++||||++|+.+++|++|+|||||++ .+
T Consensus 16 ~~~~~Ll~~LR~~l----gltg~K~gC~~G~CGACtVlv----------dg~~v~SCl~~~~~~~G~~V~TiEgl~~-~~ 80 (148)
T TIGR03193 16 ADNMLLVDYLRDTV----GLTGTKQGCDGGECGACTVLV----------DGRPRLACSTLAHRVAGRKVETVEGLAT-NG 80 (148)
T ss_pred CCCCcHHHHHHHhc----CCCCCCCCCCCCCCCCCEEEE----------CCeEeeccHhhHhhcCCCcEEEeCCCCC-CC
Confidence 47889999999955 566999999999999999999 8999999999999999999999999986 56
Q ss_pred CccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHHh
Q 000669 87 GFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166 (1362)
Q Consensus 87 ~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~~ 166 (1362)
.+||+|++|+++|++|||||||||||++++||++ +|+| |++||+++|+|||||||||++|++|++.++
T Consensus 81 ~l~pvq~af~~~~a~QCGfCtPG~vms~~~ll~~-----~p~p-------s~~ei~~al~GnLCRCTGY~~I~~Av~~aa 148 (148)
T TIGR03193 81 RLSRLQQAFHERLGTQCGFCTPGMIMAAEALLRR-----NPSP-------SRDEIRAALAGNLCRCTGYVKIIESVEAAA 148 (148)
T ss_pred CCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHc-----CCCC-------CHHHHHHHHcCCccCCCCCHHHHHHHHHhC
Confidence 8999999999999999999999999999999954 4666 599999999999999999999999998753
No 24
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit. This protein is suggested by Bebien, et al., to be the FAD-binding subunit of a molydbopterin-containing selenate reductase. Our comparative genomics suggests it to be a subunit of a selenium-dependent molybdenum hydroxylase for an unknown substrate.
Probab=100.00 E-value=9.1e-45 Score=407.84 Aligned_cols=250 Identities=20% Similarity=0.267 Sum_probs=217.1
Q ss_pred eEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHHH
Q 000669 224 SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIES 303 (1362)
Q Consensus 224 ~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~ 303 (1362)
+|++|+|++||+++|+++ .++++++||||+|.+......++++|||++| ||+.|+.++++|+|||+|||++|+++
T Consensus 3 ~y~~P~sl~Ea~~ll~~~----~~~a~~lAGGTdL~~~~~~~~~~~lIdl~~i-eL~~I~~~~~~l~IGA~~t~~~l~~~ 77 (257)
T TIGR03312 3 QFFRPESTIQALELKKRH----TGVAVWFAGGSKLNATPTRTDKKVAISLDKL-ALDKIELQGGALHIGAMCHLQSLIDN 77 (257)
T ss_pred ceECCCCHHHHHHHHHhC----CCCCEEEecCcchhhhhcccCCCEEEEcCCC-CCCcEEecCCEEEEEeCCcHHHHHhC
Confidence 799999999999999963 3579999999999873223567899999999 99999999999999999999999876
Q ss_pred HHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCceEEEehhhh
Q 000669 304 LKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEF 383 (1362)
Q Consensus 304 ~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g~R~vpl~dF 383 (1362)
... .+.|.+++++||++||||+||||||||+++|. +|++|+|+||||+|+|.+. |+||++||
T Consensus 78 ~~~------------~~~L~~aa~~va~~qIRN~gTlGGNl~~a~p~---~D~~~~LlaldA~v~l~~~---r~vp~~dF 139 (257)
T TIGR03312 78 ELT------------PAALKEALGFVYSRHIRNQATIGGEIAAFQSE---SLLLPVLLALKATVVLANA---SQMDIEDY 139 (257)
T ss_pred cch------------HHHHHHHHHHhCCHHHhccccHHHHhhcCCCc---hHHHHHHHHcCCEEEEecC---cEEeHHHh
Confidence 421 23799999999999999999999999999999 9999999999999999876 89999999
Q ss_pred hcCCCCCCCceEEEEEecCCCCCCCCcccccccceeeeeeeccCCCCCccceeEEEEEEEEccCCCCCCceeeeeEEEEc
Q 000669 384 LERPPLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFG 463 (1362)
Q Consensus 384 ~~~~~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~G 463 (1362)
|.+. ++|||++|+||.+.. .+.++|+ +| +..+||+||+|+.+++++ ++||+||
T Consensus 140 ~~g~---~~Ell~~V~iP~~~~------------~~~~~k~-~R-~~~~~a~v~~A~~~~~~~----------~~ria~g 192 (257)
T TIGR03312 140 LASE---QRELIVEVIIPNPNL------------MCATRNI-SR-SAAGLAVVTAAVAVDQKG----------NMRIALD 192 (257)
T ss_pred cCCC---CCcEEEEEEcCCCCC------------CceEEEe-cC-cccchhhheeEEEEEecC----------CEEEEEE
Confidence 9874 799999999997532 2234566 66 689999999999988741 3899999
Q ss_pred ccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHhccccccCCC-CCHHHHHHHHHHHHHHHHHHhhhh
Q 000669 464 AFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVVAEVGT-PNPAYRSSLAVGFLFEFFSSLTET 531 (1362)
Q Consensus 464 gv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~~~p~~d~-~s~~YR~~la~~L~~r~l~~~~~~ 531 (1362)
|++++ |+|+.++|+. .++++.++++ +.+++.|.+|. +|++||++|+.+|++|++.++.+-
T Consensus 193 gv~~~-p~r~~~~E~~----~~~~~~~~~~---~~~~~~p~~D~r~sa~YRr~~~~~l~~r~l~~~~~~ 253 (257)
T TIGR03312 193 GVSPV-PVRLRDVEAQ----DLKGEALEQA---VADAIHPVADLCGSVAYKRYIAGVVVADLLAECQQL 253 (257)
T ss_pred ccCCc-eeehHHHhhC----cCCHHHHHHH---HHhcCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 9999999985 6777877654 56789999997 899999999999999999987763
No 25
>PRK09908 xanthine dehydrogenase subunit XdhC; Provisional
Probab=100.00 E-value=1.1e-45 Score=376.27 Aligned_cols=133 Identities=35% Similarity=0.540 Sum_probs=121.5
Q ss_pred CCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
.|..+||.+||+. +|||||.||++|+||||||+| |+++||||++|+.+++|++|+|||||++ .+
T Consensus 23 ~~~~~Ll~~LR~~-----gltgtK~GC~~G~CGACtVlv----------dg~~v~SCl~~a~~~~G~~V~TiEGl~~-~~ 86 (159)
T PRK09908 23 APGTPLSELLREQ-----GLLSVKQGCCVGECGACTVLV----------DGTAIDSCLYLAAWAEGKEIRTLEGEAK-GG 86 (159)
T ss_pred CCCCcHHHHHHHc-----CCCCCCCCcCCCCCCCcEEEE----------CCcEeehhHhhHHHhCCCEEEeecCCCC-CC
Confidence 5889999999972 677999999999999999999 8899999999999999999999999986 57
Q ss_pred CccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHH
Q 000669 87 GFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSF 165 (1362)
Q Consensus 87 ~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~ 165 (1362)
.+||||+||+++|++|||||||||||++++||++ +|.|+ +|++||+++|+|||||||||++|++|++.+
T Consensus 87 ~l~pvQ~Af~~~~a~QCGyCtPG~ims~~aLl~~-----~~~~~-----~s~~eI~~al~GNlCRCTGY~~I~~Av~~~ 155 (159)
T PRK09908 87 KLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAK-----PREKP-----LTITEIRRGLAGNLCRCTGYQMIVNTVLDC 155 (159)
T ss_pred CCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHc-----CCCCC-----CCHHHHHHHHcCCccCCCCCHHHHHHHHHH
Confidence 8999999999999999999999999999999964 33211 369999999999999999999999999865
No 26
>TIGR03198 pucE xanthine dehydrogenase E subunit. This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.
Probab=100.00 E-value=3.6e-45 Score=372.31 Aligned_cols=133 Identities=31% Similarity=0.546 Sum_probs=123.3
Q ss_pred CCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
.|+.+|+.+||++.++| |||.||++|+||||||+| |+++|+||++|+.+++|++|+|||||+. +
T Consensus 18 ~~~~~Ll~~LR~~~~lt----gtK~gC~~G~CGACtVlv----------dG~~v~SCl~~~~~~~G~~v~TiEgl~~--~ 81 (151)
T TIGR03198 18 VPTTRLSDLLRKELQLT----GTKVSCGIGRCGACSVLI----------DGKLANACLTMAYQADGHEITTIEGIAE--N 81 (151)
T ss_pred CCCcHHHHHHHhccCCC----CCCCCCCCCcCCccEEEE----------CCcEEechHHHHHHhcCCEEEecCCcCC--C
Confidence 47899999999976555 999999999999999999 7899999999999999999999999973 5
Q ss_pred CccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHHh
Q 000669 87 GFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166 (1362)
Q Consensus 87 ~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~~ 166 (1362)
.+||||+||+++|++|||||||||||++++||++ +|+| |++||+++|+|||||||||++|++|++.++
T Consensus 82 ~l~pvQ~af~~~~a~QCGfCtpG~im~~~~ll~~-----~p~p-------~~~ei~~al~gnlCRCtgY~~I~~Av~~~~ 149 (151)
T TIGR03198 82 ELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRE-----TPQP-------SDEDMEEGLSGNLCRCTGYGGIIRSACRIR 149 (151)
T ss_pred CCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHc-----CCCC-------CHHHHHHHHcCCCcCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999954 4666 599999999999999999999999999886
Q ss_pred h
Q 000669 167 A 167 (1362)
Q Consensus 167 ~ 167 (1362)
.
T Consensus 150 ~ 150 (151)
T TIGR03198 150 R 150 (151)
T ss_pred c
Confidence 3
No 27
>PRK11433 aldehyde oxidoreductase 2Fe-2S subunit; Provisional
Probab=100.00 E-value=6.5e-44 Score=379.86 Aligned_cols=146 Identities=31% Similarity=0.521 Sum_probs=126.2
Q ss_pred CCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
.|..+||.+||+.. +|||||.||++|.||||||+| |+++||||++|+.+++|++|+|||||++ .+
T Consensus 66 ~~~~tLLd~LR~~l----~ltGtK~GC~~G~CGACTVlV----------dG~~v~SCl~la~~~~G~~ItTiEGL~~-~~ 130 (217)
T PRK11433 66 DTRTTLLDALREHL----HLTGTKKGCDHGQCGACTVLV----------NGRRLNACLTLAVMHQGAEITTIEGLGS-PD 130 (217)
T ss_pred CCCCcHHHHHHHhc----CCCCCCCCCCCCCcCceEEEE----------CCEEeeeeeeehhhcCCCEEEEeCCcCC-CC
Confidence 47899999999955 567999999999999999999 8999999999999999999999999986 56
Q ss_pred CccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCC----CCCCCCCCHHHHHHHhhCCcccCCCChhHHHHH
Q 000669 87 GFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEP----PAGFSKLTRSEAEKAIAGNLCRCTGYRPIADAC 162 (1362)
Q Consensus 87 ~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~----~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~ 162 (1362)
.|||+|+||+++|++|||||||||||++++||++++... |.. ....+.+|++||+++|+|||||||||++|++|+
T Consensus 131 ~lhpvQ~Af~~~~a~QCGyCTPG~imsa~alL~~~~~~~-~~~~~~~~~~~p~pt~~eIrealsGNlCRCtgY~~Iv~Av 209 (217)
T PRK11433 131 NLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGI-PSHVTVDLTAAPELTADEIRERMSGNICRCGAYSNILEAI 209 (217)
T ss_pred CCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHhccccC-ccccccccccCCCCCHHHHHHHHcCCccCCCCcHHHHHHH
Confidence 899999999999999999999999999999998643210 000 000123579999999999999999999999999
Q ss_pred HHHhhc
Q 000669 163 KSFAAD 168 (1362)
Q Consensus 163 ~~~~~~ 168 (1362)
++++..
T Consensus 210 ~~~a~~ 215 (217)
T PRK11433 210 EDVAGE 215 (217)
T ss_pred HHHHhc
Confidence 998753
No 28
>COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]
Probab=100.00 E-value=8.7e-44 Score=357.20 Aligned_cols=135 Identities=39% Similarity=0.657 Sum_probs=125.3
Q ss_pred CCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
-|...|+-.|||. |+|||||.||+.|.||||||+| |+++||||++|+++++|++|+|||||+....
T Consensus 18 ~p~~~Ll~~LRd~----l~ltgtk~GC~~g~CGACtVlv----------DG~~v~SCl~~a~~~~G~~ItTiEGl~~~~~ 83 (156)
T COG2080 18 DPRTPLLDVLRDE----LGLTGTKKGCGHGQCGACTVLV----------DGEAVNSCLTLAVQAEGAEITTIEGLAKKDG 83 (156)
T ss_pred CCCChHHHHHHHh----cCCCCcCCCCCCccCCceEEEE----------CCeEehHHHHHHHHhCCCeEEEeecccCCCC
Confidence 4777899999995 7777999999999999999999 9999999999999999999999999996567
Q ss_pred CccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHHh
Q 000669 87 GFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166 (1362)
Q Consensus 87 ~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~~ 166 (1362)
.|||+|+||+++++.|||||||||||++++||++ +|.| |++||+++|+||+||||||..|++|++.++
T Consensus 84 ~l~~vQ~Af~e~~~~QCGyCtpG~Imsa~~lL~~-----~~~p-------s~~eI~~~lsGnlCRCt~Y~~I~~Ai~~aa 151 (156)
T COG2080 84 GLHPVQQAFLEHDAFQCGYCTPGQIMSATALLDR-----NPAP-------TDEEIREALSGNLCRCTGYQNIVAAILDAA 151 (156)
T ss_pred CcCHHHHHHHHcCCCcCCCCcHHHHHHHHHHHHh-----CCCC-------CHHHHHHHHhcCccccCCHHHHHHHHHHHH
Confidence 7899999999999999999999999999999965 4666 599999999999999999999999999887
Q ss_pred h
Q 000669 167 A 167 (1362)
Q Consensus 167 ~ 167 (1362)
+
T Consensus 152 ~ 152 (156)
T COG2080 152 E 152 (156)
T ss_pred H
Confidence 4
No 29
>PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain. They include aldehyde oxidase (1.2.3.1 from EC), that converts an aldehyde and water to an acid and hydrogen peroxide, and xanthine dehydrogenase (1.1.1.204 from EC), that converts xanthine to urate. These enzymes require molybdopterin and FAD as cofactors and have and two 2FE-2S clusters. Another enzyme that contains this domain is the Pseudomonas thermocarboxydovorans carbon monoxide oxygenase.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2E1Q_C 2CKJ_A 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B ....
Probab=100.00 E-value=2.1e-36 Score=321.15 Aligned_cols=165 Identities=36% Similarity=0.484 Sum_probs=141.5
Q ss_pred CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCccccc-cccc-CCCCeeEeCCCCCCCcceeecCCeEEecccccHHH
Q 000669 222 KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGY-YKEV-EHYDKYIDIRYIPELSMIRRDETGIEIGATVTISK 299 (1362)
Q Consensus 222 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 299 (1362)
+|+|++|+|++||+++++. +++++++||||++++ ++.+ ..|+.+|||++|+||+.|+.++++|+|||+||+++
T Consensus 2 ~~~~~~P~sl~ea~~ll~~-----~~~a~~vaGgT~l~~~~~~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~ 76 (171)
T PF00941_consen 2 PFEYFRPKSLEEALELLAK-----GPDARIVAGGTDLGVQMREGILSPDVLIDLSRIPELNGISEDDGGLRIGAAVTLSE 76 (171)
T ss_dssp S-EEEE-SSHHHHHHHHHH-----GTTEEEESS-TTHHHHHHTTS---SEEEEGTTSGGGG-EEEETSEEEEETTSBHHH
T ss_pred CeEEEccCCHHHHHHHHhc-----CCCCEEEeCCCccchhcccCccccceEEEeEEecccccEEEeccEEEECCCccHHH
Confidence 4799999999999999993 689999999999998 4443 57899999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCceEEEe
Q 000669 300 AIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFM 379 (1362)
Q Consensus 300 l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g~R~vp 379 (1362)
++++... .+.+|.|++++++||++||||+||||||||+++|. ||++++|+||||+|+|.+.+|+|++|
T Consensus 77 l~~~~~~---------~~~~p~L~~~~~~ias~~IRn~aTiGGNl~~~~~~---sD~~~~Llal~A~v~i~~~~g~r~~~ 144 (171)
T PF00941_consen 77 LEESPLI---------QQYFPALAQAARRIASPQIRNRATIGGNLCNASPA---SDLAPALLALDARVEIASPDGTRTVP 144 (171)
T ss_dssp HHHHHHH---------HHHHHHHHHHHCTSS-HHHHTT-BHHHHHHHTBTT----SHHHHHHHTT-EEEEEETTEEEEEE
T ss_pred Hhhcchh---------hhhHHHHHHHHHHhCCHhHeeeeeeccccccCccc---ccHHHHHHHhCcEEEEEcCCeeEEEE
Confidence 9998433 24799999999999999999999999999999998 99999999999999999999999999
Q ss_pred hhhhhcC---CCCCCCceEEEEEecCC
Q 000669 380 LEEFLER---PPLDCRSVLLSIEIPYW 403 (1362)
Q Consensus 380 l~dF~~~---~~l~~~EiI~~I~iP~~ 403 (1362)
++|||.+ +.|+++|||++|+||.|
T Consensus 145 ~~~f~~g~~~~~l~~~eli~~I~iP~~ 171 (171)
T PF00941_consen 145 LEDFFTGPRKTDLEPGELITSIRIPKP 171 (171)
T ss_dssp GGGGEECTTEESS-TTEEEEEEEEES-
T ss_pred HHHhcCccccccCCCCcEEEEEECCCC
Confidence 9999984 48999999999999985
No 30
>PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases. The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A ....
Probab=99.96 E-value=1.1e-29 Score=228.90 Aligned_cols=75 Identities=52% Similarity=1.032 Sum_probs=61.7
Q ss_pred EecCCCCCCCCccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCCh
Q 000669 77 TSEGLGNSKAGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYR 156 (1362)
Q Consensus 77 TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~ 156 (1362)
|||||++ ++.|||||++|+++|++|||||||||||++++||++ ++.| |++||+++|+|||||||||+
T Consensus 1 TvEGl~~-~~~~~~iq~af~~~~a~QCGfCtpG~im~~~~ll~~-----~~~p-------~~~ei~~al~gnlCRCTgY~ 67 (75)
T PF01799_consen 1 TVEGLAS-DGELHPIQQAFVEHGAVQCGFCTPGMIMAAYALLRR-----NPDP-------TEEEIREALSGNLCRCTGYR 67 (75)
T ss_dssp -GGGSSB-TTB--HHHHHHHHTT--SSSSSHHHHHHHHHHHHHH-----SSS--------CHHHHHHHTTTS--SSSTSH
T ss_pred CcCcCCC-CCCcCHHHHHHHHhCCCcCCcchHHHHHHHHHHhhc-----ccch-------hhHHHHHHHHcCccCCCCcH
Confidence 8999986 789999999999999999999999999999999975 3555 59999999999999999999
Q ss_pred hHHHHHHH
Q 000669 157 PIADACKS 164 (1362)
Q Consensus 157 ~I~~A~~~ 164 (1362)
+|++|+++
T Consensus 68 ~I~~Av~~ 75 (75)
T PF01799_consen 68 PIVEAVRQ 75 (75)
T ss_dssp HHHHHHH-
T ss_pred HHHHHHhC
Confidence 99999974
No 31
>PF01315 Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; InterPro: IPR000674 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1N63_E 1N60_B 1ZXI_E 1N5W_E 1N62_B 1N61_E 3AN1_B 2E3T_A 1WYG_A 2W3R_D ....
Probab=99.94 E-value=1.6e-27 Score=234.77 Aligned_cols=107 Identities=46% Similarity=0.661 Sum_probs=89.2
Q ss_pred cccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCc-ccccCCCC--cccccCCc
Q 000669 600 SGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENI-GCKSMFGP--EPLFANEL 676 (1362)
Q Consensus 600 tG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A~~~pGVv~vvt~~Dip~~g~n~-~~~~~~~~--~~~~a~~~ 676 (1362)
||+++|++|++ +|||||+++||||++||+|+|||+++|+++|||++|+|++|+| +.|. +......+ +|+|++++
T Consensus 1 TG~a~Y~~Di~-~~~~l~~~~vrS~~a~a~I~sid~~~A~~~pGV~~v~t~~Dip--~~~~~~~~~~~~~~~~~~la~~~ 77 (111)
T PF01315_consen 1 TGEARYVDDIP-PPGMLYAAFVRSPIAHARIKSIDTSEALAMPGVVAVITAEDIP--GINPNGGLPIPHDEPQPVLADDK 77 (111)
T ss_dssp TT-S-BGGGSC-STTTEEEEEEE-SSSSEEEEEEEGHHHHHSTTEEEEEEGGGHS--SGSEESCSCSTTSSEEESS-SSE
T ss_pred CcCeEcccccC-CCCCeEEEEEecCcCcEEEEEEecHHHccCCCEEEEEEecccC--ccccCccccccCCCceEeccCCe
Confidence 89999999997 6899999999999999999999999999999999999999999 4432 11122334 47999999
Q ss_pred eeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCC
Q 000669 677 TRGAGQAVAFVVADTQKNANRAANLAVINYEMENL 711 (1362)
Q Consensus 677 V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l 711 (1362)
|+|+|||||+|||+|+++|++|+++|+|+| |+|
T Consensus 78 V~y~GqpVa~VvAet~~~A~~Aa~~V~V~Y--e~l 110 (111)
T PF01315_consen 78 VRYVGQPVALVVAETREAARDAAELVKVEY--EEL 110 (111)
T ss_dssp ESSTT-EEEEEEESSHHHHHHHHHT-EEEE--EE-
T ss_pred EeECCCeEEEEEECCHHHHHHHhcCcEEEe--EeC
Confidence 999999999999999999999999999999 777
No 32
>PF03450 CO_deh_flav_C: CO dehydrogenase flavoprotein C-terminal domain; InterPro: IPR005107 Proteins containing this domain form structural complexes with other known families, such as IPR008274 from INTERPRO and IPR001041 from INTERPRO]. The carbon monoxide (CO) dehydrogenase of Oligotropha carboxidovorans is a heterotrimeric complex composed of a apoflavoprotein, a molybdoprotein, and an iron-sulphur protein. It can be dissociated with sodium dodecylsulphate []. CO dehydrogenase catalyzes the oxidation of CO according to the following equation []: CO + H2O = CO2 + 2e + 2H+ Subunit S represents the iron-sulphur protein of CO dehydrogenase and is clearly divided into a C- and an N-terminal domain, each binding a [2Fe-2S] cluster [].; PDB: 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B 3UNI_A 3AMZ_A ....
Probab=99.67 E-value=4e-16 Score=152.34 Aligned_cols=101 Identities=25% Similarity=0.333 Sum_probs=93.1
Q ss_pred eeeeccCCCCCccceeEEEEEEEEccCCCCCCceeeeeEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHhcc
Q 000669 421 TYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDT 500 (1362)
Q Consensus 421 ~yk~~~R~~~~d~a~v~~a~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~~ 500 (1362)
+||+.+| +++|++++|+|+.+.+++ +++|+++||++||++++ |+|++++|++|.|++|++++++++.+.+.++
T Consensus 2 ayk~~~R-~~~d~a~v~~a~~~~~~~-----~~~i~~~ria~g~v~~~-p~r~~~~E~~L~g~~~~~~~~~~~~~~~~~~ 74 (103)
T PF03450_consen 2 AYKIGRR-KANDIAIVNVAVLVSVDD-----DGRIEDARIAVGGVAPT-PVRAEEVEAALIGKPLSEETLEEAAEAVSEE 74 (103)
T ss_dssp EEEESSS-SSSSSSSEEEEEEEEEET-----TSEEEEEEEEEESSSSS-TEE-HHHHHHTTTSBSSHHHHHHHHHHHHHH
T ss_pred CeeccCc-cccHHHHHhhhheEEEec-----CceEEEEEEEEeccccc-eeehHHHHHHHhhcchhhhhHHHHHHHHHhc
Confidence 5777777 799999999999999983 45999999999999999 9999999999999999999999999999999
Q ss_pred ccccCCC-CCHHHHHHHHHHHHHHHHHHh
Q 000669 501 VVAEVGT-PNPAYRSSLAVGFLFEFFSSL 528 (1362)
Q Consensus 501 ~~p~~d~-~s~~YR~~la~~L~~r~l~~~ 528 (1362)
+.|.+|. +|++||++|+.+|++|+|.++
T Consensus 75 ~~~~~d~r~s~~YR~~l~~~l~~ral~~~ 103 (103)
T PF03450_consen 75 IDPISDMRASAEYRRHLARVLVRRALEEV 103 (103)
T ss_dssp THHCTTTTBTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 9999986 899999999999999999864
No 33
>COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]
Probab=99.44 E-value=4e-15 Score=190.86 Aligned_cols=431 Identities=14% Similarity=0.077 Sum_probs=257.1
Q ss_pred ccccccCCccCCccccccccCCCCCCCC-CcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccC
Q 000669 560 LSDKNKVPTLLSSAKQVVQLSREYYPVG-GPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSN 638 (1362)
Q Consensus 560 ~~~~~~~~~~~~~~~q~~~~~~~~~~vG-~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~ivrSp~a~A~I~sID~s~A 638 (1362)
.++..+...+.+-..+ ++.+..+.++| ...++ |+. ++|+.+.|..|.. .++||+..+.+++..-.+|.+ |...+
T Consensus 160 a~a~A~~~v~~~~~~~-~~~~~~~E~~g~~a~~~-d~~-~lt~~~~tQ~~~~-~~~~l~~~l~~p~~~vrvi~~-dvGgg 234 (731)
T COG1529 160 AFAAAAVVVEAPYKTP-RKDPNPMEPHGVVAVPD-DGD-KLTVWASTQIPHR-LRGMLAAVLGIPPSKVRVISP-DVGGG 234 (731)
T ss_pred hhhcCcEEeeeeeecc-CcCccCcccccceeeEc-CCC-eEEEEEccCCchH-HHHHHHHHhCCCHHHeEEecC-CCCcc
Confidence 3434444444444444 56677889999 77888 777 9999999999997 689999999855555555555 88877
Q ss_pred CCCCCeEEEEEcCCCCCCCCCcccccCCCCcccccCCceeecCCeEEEEEeCCHHHHHHhcccCeEEEcccCCCCCcCCH
Q 000669 639 SIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSV 718 (1362)
Q Consensus 639 ~~~pGVv~vvt~~Dip~~g~n~~~~~~~~~~~~~a~~~V~y~GqpVa~VvAet~~~A~~Aa~lV~Vey~~e~l~p~v~~~ 718 (1362)
...++++.+... + +---..-.|.||.++-..++... .. ....+...++
T Consensus 235 fG~K~~~~~~~~---~------------------~~~aa~~~grpVk~~~tR~e~~~---------~~--~~~~~~~~~~ 282 (731)
T COG1529 235 FGSKGVVYVEEI---L------------------AALAAVVAGRPVKWIETREELFV---------AT--GHRRATLIDV 282 (731)
T ss_pred cCCcccceeHHH---H------------------HHHHHHhcCCCeEEecchHHhhh---------cc--CCCCCceEEe
Confidence 777775444332 1 10111122344543333322222 11 1000011111
Q ss_pred HHHH-hcCCCcccCCCccccccCc-----hhhhhh---ccccceEEEEEEeCcccCCCCCCCcEEEEECCCCcEEEEeCC
Q 000669 719 EEAV-EQSSLFEIFPHWYPKQVGD-----ITKGMD---EADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSST 789 (1362)
Q Consensus 719 ~~Al-~~~~~~~~~~~~~~~~~Gd-----~~~a~~---~a~~vvve~~y~~~~q~H~~mEp~~avA~~~~dg~l~V~~st 789 (1362)
+-+. +.+.+..... ......|+ +.+.+. ...+. ++..|..++..|..||| ++.....++. ..|
T Consensus 283 ~~~a~~dg~l~~~~~-~~~~~~Gay~~~~~~~~~~~~~~g~Y~-i~~~~~~~~~v~tn~~p-~~~~Rg~g~~-----~~~ 354 (731)
T COG1529 283 KLGADKDGRLLAIKG-TVAADTGAYNGPTVPAAAAGLARGPYK-IEAVYIEPYLVHTNMPP-NGAYRGAGRP-----EGT 354 (731)
T ss_pred eeecCcCCcEEeeee-eEEecCCCccccchhHHHHHhcCCcee-cccceeeeEEEEcCCCC-CcccccCCCc-----hhH
Confidence 1111 1111100000 00122233 322222 23344 89999999999999999 6666654332 789
Q ss_pred CChHHHHHHHHHHhCCCCccEEEEEccCCCCCC-CccCcccccccchhhhhhhhhHHHHHHHHHHhcC---CCEEEEeCH
Q 000669 790 QCPENVHATISRCLGIPQHNVRVITRRLGGGFG-GKFLNPCLIHYRDIAYRVFKSVATACALAAYKLC---RPVRIYVDR 865 (1362)
Q Consensus 790 Q~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG-~K~~~~~~~~~~~~~~~~~~~~~~~aAlaA~~~g---RPVkl~~tR 865 (1362)
|.+...+..+|+.|||++.+||++....+|+|| ++...... +...+..++++++ ||+|..|+|
T Consensus 355 ~a~E~~~d~lA~~Lgidp~eiR~~n~~~~g~~~~~~~~~~~~-------------~~~~~~~~ak~~~~~~~~~k~~~~r 421 (731)
T COG1529 355 FALERAVDELAEELGIDPVEIRLRNLIRGGPFGLGRRYDSGD-------------YLEELDEAAKRFGWSERPVKPIWTR 421 (731)
T ss_pred HHHHHHHHHHHHHhCCCHHHHhhhhccccCCCCCcccccCcc-------------HHHHHHHHHHhcCcccccCChhhhh
Confidence 999999999999999999999999999999999 44332222 4455566778776 999999999
Q ss_pred HHHHhhcCCCCcEE--------EEEEEeeCCCCcEEEEEEEEEecCCCCCCCCchhhH-HhhccCCCCcCCcEEEEEEEe
Q 000669 866 KTDMIMTGGRHPMK--------ISYSVGFKSNGKITALQLNILIDAGMYPDISPVMPM-IMLGTLKKYDWGALHFDIKVC 936 (1362)
Q Consensus 866 eed~~~~~~R~~~~--------~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~~~~~-~~~~~~~~Y~ipn~~~~~~~v 936 (1362)
++++...-++.-+. ...++-++.||++....... +++..... ......-.|.||+-+++....
T Consensus 422 e~~~~~G~g~a~~~~~~~~~~~~~a~v~~~~~g~v~v~~g~~--------~~G~G~~t~~~q~~ae~lgip~~~V~v~~g 493 (731)
T COG1529 422 EGDLRRGVGRAMYTEPSGAGPGEGARVRLEADGTVTVRTGAT--------DIGQGTDTVLAQIAAEELGIPPDDVEVVHG 493 (731)
T ss_pred cCCeeeeeEEEEEEEeccCCCCCcEEEEEcCCCcEEEEECCc--------cCCCcHHHHHHHHHHHHhCCCHHHEEEEec
Confidence 99987533333222 22344455677766432221 11211111 111224678999999988888
Q ss_pred ecCCCCccccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhCCCCCCccccccCCCCCcccCCHHHHHHHHHHhCCc
Q 000669 937 RTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEYTIPLMWDKLAVSSSF 1016 (1362)
Q Consensus 937 ~TN~~~~ga~Rg~G~~q~~fa~E~~md~lA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 1016 (1362)
.|..++ .+||.+|+....|+.|.+++++++..+.||..+|+..-.+..+. .|+.......|
T Consensus 494 Dt~~~~-~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~aa~~l~~~~~~~------------------~~~~g~~~~~~ 554 (731)
T COG1529 494 DTDVPV-GGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAARMLGADAEDV------------------VLEDGAFKVGG 554 (731)
T ss_pred CCCCCC-CCCCCcCcccccchHHHHHHHHHHHHHHHHHHHHhhhCCChhHe------------------eeccCeeeecc
Confidence 888665 88999999999999999999999999999999998872222111 22333334444
Q ss_pred hhHHH--HHHHHhhcCCCceeeeeeeeeEeecc----cCCCcEEEEEcC-CCcEEEE--eCCcccCCChhH
Q 000669 1017 NQRTE--MIKEFNRSNLWQKRGICRVPIVHEMF----VKSSPGKVSILS-DGSIVVE--VGGIELGQGLWT 1078 (1362)
Q Consensus 1017 ~~r~~--~~~~~n~~~~~~krGi~~a~~~~~~~----~~~~~a~v~l~~-DGsv~v~--~g~~e~GQG~~T 1078 (1362)
..+.. ...+. ..+-+.+|+.+... |+.. +...-+.|+|++ +|+|.|. ....|.|.=++=
T Consensus 555 ~~~~~~~~~~~~--a~~~~~~~~~~~~~-~~~~~~~~~~A~~~EV~Vd~~tG~vrV~r~~~~~D~G~vvNP 622 (731)
T COG1529 555 GDRRSAVSLKEV--AGKGLAPGLAVAAS-FGSDNTYPYGAHIAEVEVDPETGEVRVLRVVAVDDCGRVVNP 622 (731)
T ss_pred CCccceeeHHHh--hhccccCccccccc-ccccccccceeEEEEEEEECCCCcEEEEEEEEEEecCCccCH
Confidence 32100 00000 00013355555432 1111 223457889995 8987775 455666654443
No 34
>PRK12386 fumarate reductase iron-sulfur subunit; Provisional
Probab=98.41 E-value=2.3e-07 Score=104.28 Aligned_cols=66 Identities=11% Similarity=0.030 Sum_probs=55.6
Q ss_pred CCchHHHHHhhhccceeecc-cccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLAL-RVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGN 83 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l-~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~ 83 (1362)
.|..|||-.|+. -..+..= .++|.||++|.||+|+|+| ||++++||.+++.+++|.+++|||+|.+
T Consensus 27 ~~~~tvLd~L~~-i~~~~d~~l~~r~~C~~g~CGsCa~~I----------nG~p~laC~t~~~~~~~~~~itiepl~~ 93 (251)
T PRK12386 27 NEGEVVLDVIHR-LQATQAPDLAVRWNCKAGKCGSCSAEI----------NGRPRLMCMTRMSTFDEDETVTVTPMRT 93 (251)
T ss_pred CCCCCHHHHHHH-hccccCCCCcccCCCCCCcCCCCEEEE----------CccEeccHHhHHHHhCCCCeEEEccCCC
Confidence 467888888887 2222111 4899999999999999999 9999999999999999999999999975
No 35
>PRK05950 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=97.87 E-value=1.1e-05 Score=90.73 Aligned_cols=65 Identities=8% Similarity=-0.094 Sum_probs=57.5
Q ss_pred CchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCC
Q 000669 8 QTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGN 83 (1362)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~ 83 (1362)
+..|||..|+.--.+.....+.+.||++|.||+|+|.| ||+++.||.+++..+ |.+++|||+|.+
T Consensus 27 ~~~tvl~~L~~~~~~~~~~l~~~~~c~~g~Cg~C~v~v----------nG~~~laC~t~~~~~-~~~~~tiepl~~ 91 (232)
T PRK05950 27 CGPMVLDALIKIKNEIDPTLTFRRSCREGVCGSDAMNI----------NGKNGLACITPISDL-KKGKIVIRPLPG 91 (232)
T ss_pred CCCHHHHHHHHhCCccCCcceeeCCCCCCCCCCCEEEE----------CCcCccchhChHhHc-CCCeEEEEECCC
Confidence 67899999998765555677889999999999999999 899999999999999 668999999975
No 36
>TIGR00384 dhsB succinate dehydrogenase and fumarate reductase iron-sulfur protein. Succinate dehydrogenase and fumarate reductase are reverse directions of the same enzymatic interconversion, succinate + FAD+ = fumarate + FADH2 (EC 1.3.11.1). In E. coli, the forward and reverse reactions are catalyzed by distinct complexes: fumarate reductase operates under anaerobic conditions and succinate dehydrogenase operates under aerobic conditions. This model also describes a region of the B subunit of a cytosolic archaeal fumarate reductase.
Probab=97.66 E-value=3e-05 Score=86.42 Aligned_cols=66 Identities=14% Similarity=0.087 Sum_probs=56.3
Q ss_pred CCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGN 83 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~ 83 (1362)
.+..|||..|+.--.......+.+.+|+.|.||+|+|.| ||+++.||.+++..+ |++++|||.|.+
T Consensus 22 ~~~~tvl~~l~~i~~~~~~~l~~~~~C~~g~Cg~C~v~v----------nG~~~laC~t~v~~~-g~~~~~iepl~~ 87 (220)
T TIGR00384 22 DEGMTVLDALNYIKDEQDPSLAFRRSCRNGICGSCAMNV----------NGKPVLACKTKVEDL-GQPVMKIEPLPN 87 (220)
T ss_pred CCCCcHHHHHHHHHHhcCCCceeecccCCCCCCCCeeEE----------CCEEhhhhhChHHHc-CCCcEEEeeCCC
Confidence 367888888887654444556778999999999999999 889999999999998 999999999964
No 37
>PRK12576 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=97.38 E-value=0.00012 Score=84.23 Aligned_cols=64 Identities=17% Similarity=0.099 Sum_probs=51.1
Q ss_pred CCchHHHHHhhh---ccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhc--CCCEEEEecCC
Q 000669 7 SQTLTLLLLCLS---SCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSV--NGCSITTSEGL 81 (1362)
Q Consensus 7 ~~~~~~~~~~~~---~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~--~g~~i~TvEgl 81 (1362)
.+..|||..|+. ....|| +.+.+|.+|.||+|+|.| ||+++.||.+++..+ ++.+++|||+|
T Consensus 32 ~~~~tvLd~L~~i~~~~d~tl---~~~~~C~~G~CgsC~v~I----------NG~~~laC~t~v~~~~~~~~~~~tiePl 98 (279)
T PRK12576 32 DRFTQVTEALRRIKEEQDPTL---SYRASCHMAVCGSCGMKI----------NGEPRLACKTLVLDVAKKYNSVITIEPM 98 (279)
T ss_pred CCCCHHHHHHHHhCCccCCCc---eecCCCCCCCCCCCEEEE----------CCcEeccccCcHHHhhcCCCCcEEEEEC
Confidence 356677776665 333333 457999999999999999 899999999999998 46788999999
Q ss_pred CC
Q 000669 82 GN 83 (1362)
Q Consensus 82 ~~ 83 (1362)
.+
T Consensus 99 ~~ 100 (279)
T PRK12576 99 DY 100 (279)
T ss_pred CC
Confidence 75
No 38
>PF13085 Fer2_3: 2Fe-2S iron-sulfur cluster binding domain; PDB: 3P4Q_N 1KFY_N 3CIR_N 3P4R_B 2B76_N 1KF6_B 3P4P_N 3P4S_B 1L0V_B 1ZOY_B ....
Probab=97.05 E-value=0.00063 Score=67.00 Aligned_cols=62 Identities=19% Similarity=0.152 Sum_probs=48.6
Q ss_pred chHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCE--EEEecCCCC
Q 000669 9 TLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCS--ITTSEGLGN 83 (1362)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~--i~TvEgl~~ 83 (1362)
-|++|.+++..-.-+|..+ .+|.+|.||+|.|.| ||+++.+|.+++-.+.... .+|||=|.+
T Consensus 31 VLd~L~~Ik~~~D~sLafr---~sCr~giCGsCam~I----------NG~~~LAC~t~v~~~~~~~~~~i~IePL~~ 94 (110)
T PF13085_consen 31 VLDALNYIKEEQDPSLAFR---YSCRSGICGSCAMRI----------NGRPRLACKTQVDDLIEKFGNVITIEPLPN 94 (110)
T ss_dssp HHHHHHHHHHHT-TT--B-----SSSSSSSSTTEEEE----------TTEEEEGGGSBGGGCTTSETBEEEEEESTT
T ss_pred HHHHHHHHHhccCCCeEEE---ecCCCCCCCCCEEEE----------CCceecceeeEchhccCCCcceEEEEECCC
Confidence 3677778877766566554 999999999999999 9999999999999998763 788998854
No 39
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.57 E-value=0.0069 Score=70.73 Aligned_cols=163 Identities=12% Similarity=0.090 Sum_probs=103.7
Q ss_pred cccccC-CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEeccc
Q 000669 216 WMLLDV-KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGAT 294 (1362)
Q Consensus 216 ~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~ 294 (1362)
++.+.+ ...++.|+|.+|+.++++-... +.-...+++|||.+.+-.. ..+..+|++++. +..|+.+++.+++||+
T Consensus 29 t~~igg~a~~~v~p~~~edl~~~v~~a~~-~~ip~~vlGgGSNllv~d~-g~~gvVI~l~~~--~~~i~~~~~~v~v~AG 104 (302)
T PRK14652 29 AVRVGGPADLLVRPADPDALSALLRAVRE-LGVPLSILGGGANTLVADA-GVRGVVLRLPQD--FPGESTDGGRLVLGAG 104 (302)
T ss_pred EeecCCcceEEEEcCCHHHHHHHHHHHHH-CCCcEEEEcCCcceeecCC-CEeeEEEEecCC--cceEEecCCEEEEECC
Confidence 455556 5678899999999988763211 1346888999999865332 234688998752 5566767789999999
Q ss_pred ccHHHHHHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCc
Q 000669 295 VTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQK 374 (1362)
Q Consensus 295 vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g 374 (1362)
+++.+|.+.+... .+.. +...++.+ ||+||++++.... +-.++.=.+. .|++...+|
T Consensus 105 ~~~~~L~~~~~~~----------GL~G----lE~l~gIP----GTvGGav~mNaGa-~ggei~d~v~----~v~vv~~~G 161 (302)
T PRK14652 105 APISRLPARAHAH----------GLVG----MEFLAGIP----GTLGGAVAMNAGT-KLGEMKDVVT----AVELATADG 161 (302)
T ss_pred CcHHHHHHHHHHc----------CCcc----cccccCCC----cchhHHHHHcCCC-CceEhhheEE----EEEEECCCC
Confidence 9999999886652 1111 22233322 6999999766541 1122222222 455666677
Q ss_pred eEEEehhh-hhc--CCCCCCCceEEEEEecCCCC
Q 000669 375 CEKFMLEE-FLE--RPPLDCRSVLLSIEIPYWDP 405 (1362)
Q Consensus 375 ~R~vpl~d-F~~--~~~l~~~EiI~~I~iP~~~~ 405 (1362)
.++++-+| +|. ...+..+-||+++.+-..+.
T Consensus 162 ~~~~~~~e~~f~YR~s~~~~~~II~~a~~~L~~~ 195 (302)
T PRK14652 162 AGFVPAAALGYAYRTCRLPPGAVITRVEVRLRPG 195 (302)
T ss_pred cEEeehhhcCcccceeccCCCeEEEEEEEEEecC
Confidence 66788777 332 22233356999988876543
No 40
>PRK12385 fumarate reductase iron-sulfur subunit; Provisional
Probab=96.40 E-value=0.0025 Score=72.15 Aligned_cols=61 Identities=20% Similarity=0.278 Sum_probs=46.3
Q ss_pred CchHHHHHh---hhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCC
Q 000669 8 QTLTLLLLC---LSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGN 83 (1362)
Q Consensus 8 ~~~~~~~~~---~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~ 83 (1362)
++.|||..| ++....+|.. +.+|..|.||+|+|.| ||+++.+|.+++..+.+. +|||=|.+
T Consensus 33 ~~~tvl~~L~~ik~~~d~~l~f---r~~C~~giCGsC~v~I----------nG~~~laC~t~~~~~~~~--~~iePl~~ 96 (244)
T PRK12385 33 ETTSLLDALGYIKDNLAPDLSY---RWSCRMAICGSCGMMV----------NNVPKLACKTFLRDYTGG--MKVEALAN 96 (244)
T ss_pred CCCcHHHHHHHHHHhcCCCcee---ccCCCCCcCCCCcceE----------CccChhhHhhHHHHcCCC--eEEeeCCC
Confidence 556666666 5555555544 4599999999999999 899999999999987532 67777743
No 41
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage. One of the enzymes Vanillyl-alcohol oxidase (VAO, 1.1.3.38 from EC) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110 []. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyses the oxidation of a wide variety of substrates, ranging from aromatic amines to 4-alkylphenols. ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZR6_A 3HSU_A 2AXR_A 3D2J_A 3D2H_A 3FW9_A 3FW8_A 3FW7_A 3GSY_A 3FWA_A ....
Probab=95.93 E-value=0.009 Score=61.45 Aligned_cols=106 Identities=18% Similarity=0.214 Sum_probs=73.3
Q ss_pred eEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHHH
Q 000669 224 SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIES 303 (1362)
Q Consensus 224 ~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~ 303 (1362)
-+++|+|.+|+.++++.... ..-..++.+||+.+.-... .....+||++++...-.+..++..++++|++++.+|.+.
T Consensus 3 ~vv~P~s~~ev~~~v~~a~~-~~~~v~~~g~G~~~~~~~~-~~~~ivi~~~~l~~i~~id~~~~~v~v~aG~~~~~l~~~ 80 (139)
T PF01565_consen 3 AVVRPKSVEEVQAIVKFANE-NGVPVRVRGGGHSWTGQSS-DEGGIVIDMSRLNKIIEIDPENGTVTVGAGVTWGDLYEA 80 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHH-TTSEEEEESSSTTSSSTTS-STTEEEEECTTCGCEEEEETTTTEEEEETTSBHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHH-cCCcEEEEcCCCCcccccc-cCCcEEEeeccccccccccccceeEEEeccccchhcccc
Confidence 47899999999998874321 2456788899988853211 356789999986654445556789999999999999987
Q ss_pred HHHhhhcccchhhhhHHHHHHHHHhhh-ccchhcccccCCceecccC
Q 000669 304 LKEETKEVHFECVQVFRKIAEHMEKIA-STFIRNSASVGGNLVMAQR 349 (1362)
Q Consensus 304 ~~~~~~~~~~~~~~~~p~L~~~~~~ia-s~qIRN~aTiGGNI~~asp 349 (1362)
+... -..+. .+.--.-+|+||.|++..-
T Consensus 81 l~~~------------------g~~~~~~~~~~~~~tvGG~i~~~~~ 109 (139)
T PF01565_consen 81 LAPR------------------GLMLPVEPGSGIPGTVGGAIAGNGH 109 (139)
T ss_dssp HHHH------------------TEEESSGGGSTTTSBHHHHHHTT-E
T ss_pred cccc------------------cccccccccccccceEchhhcCCCc
Confidence 6542 01111 1333446799999988654
No 42
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=95.74 E-value=0.045 Score=63.71 Aligned_cols=160 Identities=14% Similarity=0.112 Sum_probs=101.3
Q ss_pred cccccC-CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEeccc
Q 000669 216 WMLLDV-KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGAT 294 (1362)
Q Consensus 216 ~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~ 294 (1362)
++.+++ ..-|+.|+|.+|+.++++-.. +.-...++.|||-+.+-.. ..+..+|.+++ |+.|+.+++.+++||+
T Consensus 27 t~~iGG~A~~~v~p~s~eel~~~~~~~~--~~~p~~vlG~GSNlLv~d~-g~~gvVI~l~~---~~~i~i~~~~v~v~AG 100 (297)
T PRK14653 27 SFKIGGPVPLFAIPNSTNGFIETINLLK--EGIEVKILGNGTNVLPKDE-PMDFVVVSTER---LDDIFVDNDKIICESG 100 (297)
T ss_pred EeeeCcEEEEEEecCCHHHHHHHHHHHh--cCCCEEEEcCCeeEEEecC-CccEEEEEeCC---cCceEEeCCEEEEeCC
Confidence 456666 567899999999999887431 1345788999999876333 23467888755 5667767789999999
Q ss_pred ccHHHHHHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCc
Q 000669 295 VTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQK 374 (1362)
Q Consensus 295 vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g 374 (1362)
+++.+|....... .+..| +.++.. =|||||++++...+ +-.++.=.+. +|++.+.+.
T Consensus 101 ~~l~~L~~~~~~~----------GL~Gl----E~l~gI----PGTVGGAv~mNAGa-yG~ei~d~l~----~V~~~d~g~ 157 (297)
T PRK14653 101 LSLKKLCLVAAKN----------GLSGF----ENAYGI----PGSVGGAVYMNAGA-YGWETAENIV----EVVAYDGKK 157 (297)
T ss_pred CcHHHHHHHHHHC----------CCcch----hhhcCC----chhHHHHHHHhCcc-CchhhheeEE----EEEEECCCE
Confidence 9999999876652 12222 222332 47899998766553 2233333333 667766333
Q ss_pred eEEEehhhh-h--cCCCCCC--CceEEEEEecCCC
Q 000669 375 CEKFMLEEF-L--ERPPLDC--RSVLLSIEIPYWD 404 (1362)
Q Consensus 375 ~R~vpl~dF-~--~~~~l~~--~EiI~~I~iP~~~ 404 (1362)
.++++-+|. | ....+.. +-||+++.+...+
T Consensus 158 v~~~~~~e~~f~YR~S~~~~~~~~iI~~a~f~L~~ 192 (297)
T PRK14653 158 IIRLGKNEIKFSYRNSIFKEEKDLIILRVTFKLKK 192 (297)
T ss_pred EEEEchhhccccCccccCCCCCcEEEEEEEEEEec
Confidence 667777762 2 1222322 2388888776654
No 43
>TIGR01676 GLDHase galactonolactone dehydrogenase. This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.
Probab=95.56 E-value=0.029 Score=69.99 Aligned_cols=107 Identities=10% Similarity=0.254 Sum_probs=75.3
Q ss_pred CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHH
Q 000669 222 KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAI 301 (1362)
Q Consensus 222 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 301 (1362)
...+++|+|.+|+.++++.... .+...+.++||++..-... ....+||++++..+-.|..+...++++|++++.+|.
T Consensus 62 p~~~~~P~s~eEV~~iV~~A~~-~g~~Vr~~GsGhS~sg~a~--t~g~lldL~~ln~Vl~vD~~~~tVtV~AG~~l~~L~ 138 (541)
T TIGR01676 62 TRTFHQPEAIEELEGIVKQANE-KKARIRPVGSGLSPNGIGL--SRAGMVNLALMDKVLEVDEEKKRVRVQAGIRVQQLV 138 (541)
T ss_pred cceEECCCCHHHHHHHHHHHHH-cCCcEEEECCCcCCCCccc--CCCeEEEhhhCCCCEEEcCCCCEEEEcCCCCHHHHH
Confidence 3568999999999999875321 1346889999998743111 124589999987776677777899999999999998
Q ss_pred HHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccC
Q 000669 302 ESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQR 349 (1362)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp 349 (1362)
+.+... . -+ +.+..-=+..||||+|+++.-
T Consensus 139 ~~L~~~----------G-----la---l~n~gsi~~~TIGGaiatgtH 168 (541)
T TIGR01676 139 DAIKEY----------G-----IT---LQNFASIREQQIGGIIQVGAH 168 (541)
T ss_pred HHHHHc----------C-----CE---eccCCCCCCceEccccccCCc
Confidence 876642 0 01 122222355899999998744
No 44
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=95.46 E-value=0.08 Score=61.97 Aligned_cols=163 Identities=17% Similarity=0.196 Sum_probs=99.8
Q ss_pred cccccC-CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEeccc
Q 000669 216 WMLLDV-KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGAT 294 (1362)
Q Consensus 216 ~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~ 294 (1362)
++.+.+ ...++.|+|.+|+.++++.... +.-...+++|||.+.+-.. .....+||+++ .|+.|+.+++.+++||+
T Consensus 24 t~~igg~a~~vv~P~s~edv~~~v~~a~~-~~~p~~v~GgGsnll~~d~-g~~gvvI~l~~--~l~~i~~~~~~v~v~aG 99 (298)
T PRK13905 24 SFRVGGPADYLVEPADIEDLQEFLKLLKE-NNIPVTVLGNGSNLLVRDG-GIRGVVIRLGK--GLNEIEVEGNRITAGAG 99 (298)
T ss_pred eeecCceEeEEEeCCCHHHHHHHHHHHHH-cCCCEEEEeCCceEEecCC-CcceEEEEecC--CcceEEecCCEEEEECC
Confidence 345555 4567999999999998763211 1346889999999854222 23478999873 47777777789999999
Q ss_pred ccHHHHHHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCc
Q 000669 295 VTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQK 374 (1362)
Q Consensus 295 vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g 374 (1362)
+++.+|.+.+... .+. -+...++. -+||||.+++.... +-.++.-.+ . .|++...+|
T Consensus 100 ~~~~~L~~~l~~~----------Gl~----gle~~~gi----pGTVGGai~~NaG~-~G~~~~d~v--~--~v~vv~~~G 156 (298)
T PRK13905 100 APLIKLARFAAEA----------GLS----GLEFAAGI----PGTVGGAVFMNAGA-YGGETADVL--E--SVEVLDRDG 156 (298)
T ss_pred CcHHHHHHHHHHc----------CCC----cchhccCC----CcchhHHHHHcCCc-CceEhheeE--E--EEEEEeCCC
Confidence 9999999887652 111 11122222 26888888753332 101111111 1 244445566
Q ss_pred -eEEEehhhhh-c--CCCCC-CCceEEEEEecCCCC
Q 000669 375 -CEKFMLEEFL-E--RPPLD-CRSVLLSIEIPYWDP 405 (1362)
Q Consensus 375 -~R~vpl~dF~-~--~~~l~-~~EiI~~I~iP~~~~ 405 (1362)
.++++-+|.+ . ...+. ...||+++.+-..+.
T Consensus 157 ~~~~~~~~e~~~~yR~s~~~~~~gII~~~~l~l~~~ 192 (298)
T PRK13905 157 EIKTLSNEELGFGYRHSALQEEGLIVLSATFQLEPG 192 (298)
T ss_pred CEEEEEHHHcCCcCccccCCCCCEEEEEEEEEEcCC
Confidence 5677777744 2 22333 246999998876653
No 45
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion]
Probab=95.18 E-value=0.031 Score=69.23 Aligned_cols=109 Identities=16% Similarity=0.150 Sum_probs=78.6
Q ss_pred CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHH
Q 000669 222 KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAI 301 (1362)
Q Consensus 222 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 301 (1362)
...+..|+|.+|+.++++.... ++-...+.+|||++.--.... ..++||++++..+..|..++..+++.|++++.+|.
T Consensus 32 p~~v~~p~s~~eV~~iv~~a~~-~~~~v~prG~gts~~g~~~~~-~gvvl~l~~mn~i~~id~~~~~~~v~aGv~l~~l~ 109 (459)
T COG0277 32 PLAVVFPKSEEEVAAILRLANE-NGIPVVPRGGGTSLSGGAVPD-GGVVLDLSRLNRILEIDPEDGTATVQAGVTLEDLE 109 (459)
T ss_pred CCEEEccCCHHHHHHHHHHHHH-cCCeEEEECCCCCccccccCC-CcEEEEchhhcchhccCcCCCEEEEcCCccHHHHH
Confidence 3468899999999998884311 122377889999985411101 27899999966665667778999999999999999
Q ss_pred HHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccC
Q 000669 302 ESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQR 349 (1362)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp 349 (1362)
+.+... ...+ =..|+.++.+||||||++.+.
T Consensus 110 ~~l~~~--------G~~~---------p~~p~s~~~~tIGG~ia~~~~ 140 (459)
T COG0277 110 KALAPH--------GLFL---------PVDPSSSGTATIGGNIATNAG 140 (459)
T ss_pred HHHHHc--------CCcc---------CCCccccccceEccchhcCCC
Confidence 876642 0011 136677799999999998876
No 46
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.93 E-value=0.14 Score=60.04 Aligned_cols=155 Identities=12% Similarity=0.163 Sum_probs=95.1
Q ss_pred CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHH
Q 000669 222 KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAI 301 (1362)
Q Consensus 222 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 301 (1362)
..-++.|.|.+|+.++++-... ..-...+++|||.+.+... .....+|++++ |+.|+.+++.+++||++++.+|.
T Consensus 37 a~~vv~p~~~edv~~~l~~a~~-~~ip~~v~GgGSNll~~d~-g~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~L~ 111 (305)
T PRK12436 37 ADVFVAPTNYDEIQEVIKYANK-YNIPVTFLGNGSNVIIKDG-GIRGITVSLIH---ITGVTVTGTTIVAQCGAAIIDVS 111 (305)
T ss_pred EEEEEecCCHHHHHHHHHHHHH-cCCCEEEEcCCeEEEEeCC-CeeEEEEEeCC---cCcEEEeCCEEEEEeCCcHHHHH
Confidence 4568899999999988852210 1345889999999975332 23468899875 55677778899999999999998
Q ss_pred HHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCc-eEEEeh
Q 000669 302 ESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQK-CEKFML 380 (1362)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g-~R~vpl 380 (1362)
+.+... .+..|.- .+ ---+||||++.+.... +-.++.=. +. .+++...+| .++++-
T Consensus 112 ~~~~~~----------gl~Gle~----~~----giPGtVGGav~~NAGa-yG~~~~dv---l~-~v~vv~~~G~v~~~~~ 168 (305)
T PRK12436 112 RIALDH----------NLTGLEF----AC----GIPGSVGGALYMNAGA-YGGEISFV---LT-EAVVMTGDGELRTLTK 168 (305)
T ss_pred HHHHHc----------CCccchh----hc----CCccchhHHHHhcCcc-chhehhee---ee-EEEEEeCCCCEEEEEH
Confidence 876642 1111111 11 1247899999765542 11111111 11 233334455 677888
Q ss_pred hhhh-c--CCCCCC-CceEEEEEecCCC
Q 000669 381 EEFL-E--RPPLDC-RSVLLSIEIPYWD 404 (1362)
Q Consensus 381 ~dF~-~--~~~l~~-~EiI~~I~iP~~~ 404 (1362)
+|.. . ...+.. ..||+++.+-...
T Consensus 169 ~e~~f~YR~s~~~~~~~iil~a~~~l~~ 196 (305)
T PRK12436 169 EAFEFGYRKSVFANNHYIILEARFELEE 196 (305)
T ss_pred HHhcCcCCCCcCCCCCEEEEEEEEEEcC
Confidence 8833 2 234443 3478888776654
No 47
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=94.81 E-value=0.061 Score=67.38 Aligned_cols=109 Identities=11% Similarity=-0.001 Sum_probs=73.5
Q ss_pred ceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHH
Q 000669 223 GSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIE 302 (1362)
Q Consensus 223 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 302 (1362)
.-.++|.|.+|+.++++-... ..-...+.+|||++.--..-.....+||++++.....|..++..++++|++|+.+|.+
T Consensus 57 ~~Vv~P~s~eeV~~iv~~a~~-~~ipv~~rG~Gt~~~gg~~~~~~gividl~~ln~I~~id~~~~~v~VeaGv~~~~L~~ 135 (499)
T PRK11230 57 LLVVLPKQMEQVQALLAVCHR-LRVPVVARGAGTGLSGGALPLEKGVLLVMARFNRILDINPVGRRARVQPGVRNLAISQ 135 (499)
T ss_pred CEEEeeCCHHHHHHHHHHHHH-cCCeEEEECCCcCcCCCcccCCCcEEEEcccCCCceEEcCCCCEEEEcCCccHHHHHH
Confidence 357899999999998873210 1234567789998732000012468999999665555666778999999999999998
Q ss_pred HHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccC
Q 000669 303 SLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQR 349 (1362)
Q Consensus 303 ~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp 349 (1362)
.+... .+ ..-..|+-...+||||||++...
T Consensus 136 ~l~~~----------Gl-------~~~~~p~s~~~~tvGG~ia~nag 165 (499)
T PRK11230 136 AAAPH----------GL-------YYAPDPSSQIACSIGGNVAENAG 165 (499)
T ss_pred HHHHc----------CC-------eeCCCCCccccceEcceeccCCC
Confidence 87752 11 00123444567999999997533
No 48
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=94.35 E-value=0.37 Score=56.19 Aligned_cols=162 Identities=13% Similarity=0.163 Sum_probs=98.5
Q ss_pred cccccC-CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEeccc
Q 000669 216 WMLLDV-KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGAT 294 (1362)
Q Consensus 216 ~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~ 294 (1362)
++.+++ ...|+.|.|.+|+.++++.... +.-...++.||+-+.+-..+.....+|-+.+ ++.|+..++.|++||+
T Consensus 26 t~~iGG~A~~~~~p~~~~eL~~~l~~~~~-~~~p~~vlG~GSNlLv~D~g~~~g~vi~~~~---~~~i~~~~~~v~a~AG 101 (302)
T PRK14650 26 TYKIGGISKLFLTPKTIKDAEHIFKAAIE-EKIKIFILGGGSNILINDEEEIDFPIIYTGH---LNKIEIHDNQIVAECG 101 (302)
T ss_pred eeeeCcEEEEEEecCCHHHHHHHHHHHHH-cCCCEEEEeceeEEEEECCCccceEEEEECC---cCcEEEeCCEEEEEeC
Confidence 466666 5678899999999988864211 1345788999998876443214456676543 6777777788999999
Q ss_pred ccHHHHHHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCc
Q 000669 295 VTISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQK 374 (1362)
Q Consensus 295 vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g 374 (1362)
+.+.++....... .+..|- ..+.. =|||||.+++-..+ +-.++.-.+ -+|++.+.+|
T Consensus 102 ~~~~~l~~~~~~~----------gl~GlE----~l~gI----PGTVGGAv~mNAGa-yG~ei~d~l----~sV~~~d~~g 158 (302)
T PRK14650 102 TNFEDLCKFALQN----------ELSGLE----FIYGL----PGTLGGAIWMNARC-FGNEISEIL----DKITFIDEKG 158 (302)
T ss_pred CcHHHHHHHHHHc----------CCchhh----hhcCC----CcchhHHHHhhCCc-cccchheeE----EEEEEEECCC
Confidence 9999999875542 222222 22222 26777766444332 112222222 1355555555
Q ss_pred -eEEEehhhhh---cCCCCCC-CceEEEEEecCCC
Q 000669 375 -CEKFMLEEFL---ERPPLDC-RSVLLSIEIPYWD 404 (1362)
Q Consensus 375 -~R~vpl~dF~---~~~~l~~-~EiI~~I~iP~~~ 404 (1362)
.++++-+|.- ....++. +.||+++.+...+
T Consensus 159 ~~~~~~~~e~~f~YR~S~f~~~~~iIl~a~f~L~~ 193 (302)
T PRK14650 159 KTICKKFKKEEFKYKISPFQNKNTFILKATLNLKK 193 (302)
T ss_pred CEEEEEHHHcCcccccccCCCCCEEEEEEEEEEcC
Confidence 6778888843 2223443 4588998876654
No 49
>PRK13552 frdB fumarate reductase iron-sulfur subunit; Provisional
Probab=94.26 E-value=0.041 Score=62.16 Aligned_cols=60 Identities=15% Similarity=0.099 Sum_probs=47.1
Q ss_pred hHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCC
Q 000669 10 LTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGN 83 (1362)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~ 83 (1362)
|++|.++.+.-.-+|. ...+|.+|.||+|.|.| ||+++.+|.+.+-.+.+. .+|||=|.+
T Consensus 37 LdaL~~Ik~~~D~sL~---fr~sCr~giCGsCam~I----------NG~~~LAC~t~v~~~~~~-~i~iePl~~ 96 (239)
T PRK13552 37 FIALNRIREEQDPSLQ---FDFVCRAGICGSCAMVI----------NGRPTLACRTLTSDYPDG-VITLMPLPV 96 (239)
T ss_pred HHHHHHHHhcCCCCee---EeccCCCCCCCCceeEE----------CCeEhhhhhccHhhcCCC-cEEEEECCC
Confidence 5566666665444443 35999999999999999 999999999999887532 578998864
No 50
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=94.16 E-value=0.053 Score=66.46 Aligned_cols=106 Identities=12% Similarity=0.105 Sum_probs=69.9
Q ss_pred EecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHHHHH
Q 000669 226 HNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESLK 305 (1362)
Q Consensus 226 ~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~~~ 305 (1362)
++|.|.+|+.++++.... .+-...+.+|||.+.--........+||++++.....|..++..++++|++++.+|.+.+.
T Consensus 2 v~P~s~eev~~iv~~a~~-~~i~v~~~G~Gt~~~g~~~~~~~~vvidl~~mn~i~~id~~~~~v~veaGv~~~~l~~~l~ 80 (413)
T TIGR00387 2 VFPKNTEQVARILKLCHE-HRIPIVPRGAGTGLSGGALPEEGGLVLVFKHMNKILEIDVVNLTAVVQPGVRNLELEQAVE 80 (413)
T ss_pred CCCCCHHHHHHHHHHHHH-cCCcEEEECCCCCCCCCccCCCCeEEEEhHHcCceeEEcCCCCEEEEcCCccHHHHHHHHH
Confidence 479999999988773210 1345788899999731000012467899987554434445568999999999999998876
Q ss_pred HhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccC
Q 000669 306 EETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQR 349 (1362)
Q Consensus 306 ~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp 349 (1362)
.. ...+| -.++-...+||||+|++...
T Consensus 81 ~~--------gl~~~---------~~p~s~~~~tiGG~ia~na~ 107 (413)
T TIGR00387 81 EH--------NLFYP---------PDPSSQISSTIGGNIAENAG 107 (413)
T ss_pred Hc--------CCeeC---------CCCcccccceehhhhhcCCC
Confidence 52 00111 14455567999999987543
No 51
>PRK11183 D-lactate dehydrogenase; Provisional
Probab=94.08 E-value=0.11 Score=64.16 Aligned_cols=111 Identities=17% Similarity=0.096 Sum_probs=72.6
Q ss_pred CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCccccc--ccc---cCCCCeeEeCCCCCCCcceeecCCeEEeccccc
Q 000669 222 KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGY--YKE---VEHYDKYIDIRYIPELSMIRRDETGIEIGATVT 296 (1362)
Q Consensus 222 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v--~k~---~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vT 296 (1362)
..-.++|.|.+|..++++-... .+-....-+|||+|.= ... ..+..++||+.++..+..|. ++..+.+.++||
T Consensus 39 P~AVV~P~SteEVa~IVklC~e-~~vPVIPRGgGTGLtGGAvP~~~~~dR~gVVIsl~RMNrIleID-~~~~VvVePGVt 116 (564)
T PRK11183 39 ALAVVFPGTLLELWRVLQACVA-ADKIIIMQAANTGLTGGSTPNGNDYDRDIVIISTLRLDKIQLLN-NGKQVLALPGTT 116 (564)
T ss_pred CCEEEecCCHHHHHHHHHHHHH-cCCeEEEeCCCcccccCcccCCCCCcCCEEEEEhhHcCCcEEEC-CCCeEEEeCCCc
Confidence 3467899999999998873210 1233555699998831 211 12346899999876665565 456899999999
Q ss_pred HHHHHHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCC
Q 000669 297 ISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRK 350 (1362)
Q Consensus 297 l~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~ 350 (1362)
+.+|.+.++.. ..+|.. .++|.+|- +||||||++.+..
T Consensus 117 l~~LeeaLk~~---------Gl~p~s-----d~GSS~IG--asIGGnIAtNAGG 154 (564)
T PRK11183 117 LYQLEKALKPL---------GREPHS-----VIGSSCIG--ASVIGGICNNSGG 154 (564)
T ss_pred HHHHHHHHHHh---------CCCCCC-----cccccccC--CCCccceEECCcc
Confidence 99999987753 112110 12343333 4999999988773
No 52
>PRK08640 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed
Probab=93.93 E-value=0.048 Score=62.00 Aligned_cols=59 Identities=12% Similarity=0.175 Sum_probs=45.1
Q ss_pred hHHHHHhhhccceeecccc-------cccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCC
Q 000669 10 LTLLLLCLSSCVITLALRV-------SSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLG 82 (1362)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~g-------tk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~ 82 (1362)
|++|.++.+.. +.+.| ...+|.+|.||+|.|.| ||++..+|.+.+-.+. ..+|||=|.
T Consensus 36 LdaL~~I~~~~---~~~~g~~~~~l~fr~sCr~giCGsCam~I----------NG~p~LAC~t~v~~~~--~~i~iePl~ 100 (249)
T PRK08640 36 ISALMEIRRNP---VNAKGEKTTPVVWDMNCLEEVCGACSMVI----------NGKPRQACTALIDQLE--QPIRLEPMS 100 (249)
T ss_pred HHHHHHHHhcc---cccccccCCCeeEecccCCCCCCcCeeEE----------CCccchhhhChHHHcC--CcEEEEECC
Confidence 45566666653 22323 36899999999999999 9999999999998873 347899886
Q ss_pred C
Q 000669 83 N 83 (1362)
Q Consensus 83 ~ 83 (1362)
+
T Consensus 101 ~ 101 (249)
T PRK08640 101 T 101 (249)
T ss_pred C
Confidence 4
No 53
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase. This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan.
Probab=93.89 E-value=0.14 Score=59.44 Aligned_cols=159 Identities=14% Similarity=0.222 Sum_probs=93.8
Q ss_pred ccccC-CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccc
Q 000669 217 MLLDV-KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATV 295 (1362)
Q Consensus 217 ~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~v 295 (1362)
+.+++ ...|+.|+|.+|+.++++-... +.-...+++|||.+.+... .....+|++.+... .+...++.+++||++
T Consensus 7 ~~igg~a~~~v~p~s~edl~~~l~~a~~-~~~p~~vlGgGSNll~~d~-~~~gvvi~l~~~~~--~~~~~~~~v~v~aG~ 82 (284)
T TIGR00179 7 YKIGGNARHIVCPESIEQLVNVLDNAKE-EDQPLLILGEGSNLLILDD-GRGGVIINLGKGID--IEDDEGEYVHVGGGE 82 (284)
T ss_pred eecCceeeEEEEeCCHHHHHHHHHHHHH-cCCCEEEEecceEEEEccC-CcCeEEEECCCCce--EEEecCCEEEEEcCC
Confidence 44455 5578999999999988763211 2346889999999975332 33468899876432 222335689999999
Q ss_pred cHHHHHHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCc-
Q 000669 296 TISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQK- 374 (1362)
Q Consensus 296 Tl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g- 374 (1362)
++.+|.+.+... .+. -+...+..+ |||||++++.... +-.++.-.| + .|++...+|
T Consensus 83 ~~~~l~~~~~~~----------Gl~----GlE~l~giP----GtvGGai~mNAGa-yG~~i~d~l--~--~v~vv~~~G~ 139 (284)
T TIGR00179 83 NWHKLVKYALKN----------GLS----GLEFLAGIP----GTVGGAVIMNAGA-YGVEISEVL--V--YATILLATGK 139 (284)
T ss_pred cHHHHHHHHHHC----------CCc----ccccCCCCC----chHHHHHHHhccc-chhehhheE--E--EEEEEeCCCC
Confidence 999999876542 111 111222221 4899999776553 111111111 2 234445556
Q ss_pred eEEEehhhh-h--cCCCCCCC--ceEEEEEecC
Q 000669 375 CEKFMLEEF-L--ERPPLDCR--SVLLSIEIPY 402 (1362)
Q Consensus 375 ~R~vpl~dF-~--~~~~l~~~--EiI~~I~iP~ 402 (1362)
.++++-+|. | ....++.+ .+|++..+..
T Consensus 140 ~~~~~~~~~~f~YR~S~f~~~~~~iil~a~~~l 172 (284)
T TIGR00179 140 TEWLTNEQLGFGYRTSIFQHKYVGLVLKAEFQL 172 (284)
T ss_pred EEEEEHHHccccCCccccCCCCcEEEEEEEEEe
Confidence 477777773 2 22234433 3777766544
No 54
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1.
Probab=93.83 E-value=0.11 Score=64.11 Aligned_cols=106 Identities=18% Similarity=0.274 Sum_probs=70.9
Q ss_pred ceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHH
Q 000669 223 GSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIE 302 (1362)
Q Consensus 223 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 302 (1362)
...++|+|.+|+.++++.... .+-..++++||++..-.- .....+||++++..+..|..+.+.++++|++++.+|.+
T Consensus 16 ~~v~~P~s~eev~~iv~~A~~-~~~~v~v~G~GhS~s~~~--~~~gvvIdl~~l~~i~~id~~~~~vtV~aG~~l~~L~~ 92 (438)
T TIGR01678 16 EVYYQPTSVEEVREVLALARE-QKKKVKVVGGGHSPSDIA--CTDGFLIHLDKMNKVLQFDKEKKQITVEAGIRLYQLHE 92 (438)
T ss_pred CEEEecCCHHHHHHHHHHHHH-CCCeEEEECCCCCCCCCc--cCCeEEEEhhhcCCceEEcCCCCEEEEcCCCCHHHHHH
Confidence 468999999999998874311 134588889997653211 12358999988665544555557899999999999998
Q ss_pred HHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccC
Q 000669 303 SLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQR 349 (1362)
Q Consensus 303 ~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp 349 (1362)
.+... . +. +...++. +..||||.|+++.-
T Consensus 93 ~L~~~----------G---l~--l~~~g~~---~~~TvGG~iatg~h 121 (438)
T TIGR01678 93 QLDEH----------G---YS--MSNLGSI---SEVSVAGIISTGTH 121 (438)
T ss_pred HHHHc----------C---CE--ecCCCCC---CCceeeehhcCCCC
Confidence 76652 0 11 1112221 45899998876654
No 55
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=93.73 E-value=0.44 Score=56.02 Aligned_cols=155 Identities=13% Similarity=0.163 Sum_probs=96.4
Q ss_pred CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHH
Q 000669 222 KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAI 301 (1362)
Q Consensus 222 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 301 (1362)
..-|+.|.|.+|+.++++-... ..-...+++|||.+.+... .....+|++++ |+.|+.+++.+++||++++.+|.
T Consensus 37 A~~~v~p~~~edv~~~v~~a~~-~~ip~~vlGgGSNll~~d~-g~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~l~ 111 (307)
T PRK13906 37 ADFYITPTKNEEVQAVVKYAYQ-NEIPVTYLGNGSNIIIREG-GIRGIVISLLS---LDHIEVSDDAIIAGSGAAIIDVS 111 (307)
T ss_pred eEEEEEcCCHHHHHHHHHHHHH-cCCCEEEEcCceeEeecCC-CcceEEEEecC---ccceEEeCCEEEEECCCcHHHHH
Confidence 4568999999999988763211 1345888999999865332 23468899866 67777777899999999999999
Q ss_pred HHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCc-eEEEeh
Q 000669 302 ESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQK-CEKFML 380 (1362)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g-~R~vpl 380 (1362)
+..... .+..+.-. ++. -|||||++.+.... +-.++.=.+. .|++...+| .++++-
T Consensus 112 ~~~~~~----------Gl~GlE~~----~gI----PGtVGGav~mNaGa-yGg~i~D~l~----~v~vv~~~G~~~~~~~ 168 (307)
T PRK13906 112 RVARDY----------ALTGLEFA----CGI----PGSIGGAVYMNAGA-YGGEVKDCID----YALCVNEQGSLIKLTT 168 (307)
T ss_pred HHHHHc----------CCccchhh----cCC----CccHhHHHHhhCCc-chhhhhhhee----EEEEEeCCCCEEEEEH
Confidence 876542 12111111 111 36899999766553 1112222221 334444455 677888
Q ss_pred hhh-hc--CCCCCC-CceEEEEEecCCC
Q 000669 381 EEF-LE--RPPLDC-RSVLLSIEIPYWD 404 (1362)
Q Consensus 381 ~dF-~~--~~~l~~-~EiI~~I~iP~~~ 404 (1362)
+|. |. ...+.. +.||+++.+-..+
T Consensus 169 ~e~~f~YR~S~~~~~~~ii~~~~~~l~~ 196 (307)
T PRK13906 169 KELELDYRNSIIQKEHLVVLEAAFTLAP 196 (307)
T ss_pred HHccCcCCcccCCCCCEEEEEEEEEECC
Confidence 873 22 223443 3488887776554
No 56
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=93.73 E-value=0.11 Score=65.61 Aligned_cols=106 Identities=14% Similarity=0.333 Sum_probs=70.3
Q ss_pred CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHH
Q 000669 222 KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAI 301 (1362)
Q Consensus 222 ~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 301 (1362)
...+++|+|.+|+.++++.... ++...+++++|.+..-.- .....+||++++..+-.|..+...++++|++++.+|.
T Consensus 97 p~~vv~P~S~eEV~~iV~~A~~-~g~~VrvvGsGhS~~~l~--~td~glIdL~~l~~Il~vD~e~~~VtV~AG~~l~~L~ 173 (573)
T PLN02465 97 TRRYHQPESLEELEDIVKEAHE-KGRRIRPVGSGLSPNGLA--FSREGMVNLALMDKVLEVDKEKKRVTVQAGARVQQVV 173 (573)
T ss_pred CCEEEEeCCHHHHHHHHHHHHH-cCCcEEEEcCCcCCCCee--eCCCEEEECcCCCCcEEEeCCCCEEEEccCCCHHHHH
Confidence 3468999999999999874311 234688898888653211 1224579998865544445555799999999999999
Q ss_pred HHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceeccc
Q 000669 302 ESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQ 348 (1362)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~as 348 (1362)
+.+... . |+ +...++ | +.+||||.|+++.
T Consensus 174 ~~L~~~----------G---La--l~n~g~--I-~~~TIGGaIstGt 202 (573)
T PLN02465 174 EALRPH----------G---LT--LQNYAS--I-REQQIGGFIQVGA 202 (573)
T ss_pred HHHHHc----------C---CE--eccCCC--C-CCeeecchhhCCC
Confidence 887652 0 11 122232 2 4679999997653
No 57
>PLN00129 succinate dehydrogenase [ubiquinone] iron-sulfur subunit
Probab=93.63 E-value=0.061 Score=61.73 Aligned_cols=61 Identities=16% Similarity=0.208 Sum_probs=47.9
Q ss_pred chHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCC
Q 000669 9 TLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGN 83 (1362)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~ 83 (1362)
-|+.|.++.+.-.-+|.. ..+|.+|.||+|.|.| ||++..+|.+.+..+.+ ..+|||=|.+
T Consensus 75 VLd~L~~Ik~~~D~sLsf---r~sCr~giCGsCam~I----------NG~p~LAC~t~v~~~~~-~~i~iePl~~ 135 (276)
T PLN00129 75 VLDVLIKIKNEQDPSLTF---RRSCREGICGSCAMNI----------DGKNTLACLTKIDRDES-GPTTITPLPH 135 (276)
T ss_pred HHHHHHHHHHcCCCCeEE---eccCCCCCCCCCeeEE----------CCcccccccccHhhcCC-CcEEEEECCC
Confidence 466677777666556544 5799999999999999 99999999999987743 3467998864
No 58
>PRK12577 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=93.50 E-value=0.26 Score=58.47 Aligned_cols=65 Identities=14% Similarity=0.081 Sum_probs=44.9
Q ss_pred CchHHHHHhhhccceeec-ccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHh-cC--------CCEEEE
Q 000669 8 QTLTLLLLCLSSCVITLA-LRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCS-VN--------GCSITT 77 (1362)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~-~~--------g~~i~T 77 (1362)
+..|+|-.|+ .-+++.. =-.-..+|..|.||+|.|.| ||+++.||.+++.. ++ +...+|
T Consensus 27 ~~~tvL~~l~-~i~~~~d~tL~~~~~c~~~~Cg~C~v~i----------nG~~~laC~t~v~~~~~~~~~~~~~~~~~i~ 95 (329)
T PRK12577 27 PGNTILDCLN-RIKWEQDGSLAFRKNCRNTICGSCAMRI----------NGRSALACKENVGSELARLSDSNSGAIPEIT 95 (329)
T ss_pred CCChHHHHHH-HhCCcCCCCcEEcCCCCCCCCCCCEEEE----------CCeeecCcccchhhhhccccccccCCCCeEE
Confidence 4456665443 3344431 11134689999999999999 89999999999875 22 235678
Q ss_pred ecCCCC
Q 000669 78 SEGLGN 83 (1362)
Q Consensus 78 vEgl~~ 83 (1362)
||=|++
T Consensus 96 iePl~~ 101 (329)
T PRK12577 96 IAPLGN 101 (329)
T ss_pred EEECCC
Confidence 998876
No 59
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.
Probab=93.50 E-value=0.18 Score=61.86 Aligned_cols=103 Identities=13% Similarity=0.134 Sum_probs=71.3
Q ss_pred ceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHH
Q 000669 223 GSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIE 302 (1362)
Q Consensus 223 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 302 (1362)
...++|+|.+|+.++++.. ....++++||++..-.- .....+||++++..+-.+..+.+.++++|++++.+|.+
T Consensus 13 ~~v~~P~s~~ev~~~v~~a----~~~v~~~G~Ghs~~~~~--~~~g~~idl~~l~~i~~~d~~~~~v~v~aG~~l~~l~~ 86 (419)
T TIGR01679 13 SAIVRPTDEGELADVIAQA----AKPVRAVGSGHSFTDLA--CTDGTMISLTGLQGVVDVDQPTGLATVEAGTRLGALGP 86 (419)
T ss_pred CeEECCCCHHHHHHHHHHh----CCCEEEEeCCCCCCCcc--cCCCEEEEhhHcCCceeecCCCCEEEEcCCCCHHHHHH
Confidence 4688999999999999853 23588899987764321 12358999988655444555578999999999999998
Q ss_pred HHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccC
Q 000669 303 SLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQR 349 (1362)
Q Consensus 303 ~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp 349 (1362)
.+... ...+| ..++ + +..||||.|++..-
T Consensus 87 ~L~~~--------G~~l~-------~~~~--~-~~~tvGG~ia~~~h 115 (419)
T TIGR01679 87 QLAQR--------GLGLE-------NQGD--I-DPQSIGGALGTATH 115 (419)
T ss_pred HHHHc--------CCccc-------cCCC--C-CCceeccceecCCC
Confidence 77652 00111 1222 2 34799999987543
No 60
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=92.92 E-value=0.17 Score=64.05 Aligned_cols=107 Identities=15% Similarity=0.126 Sum_probs=72.5
Q ss_pred ceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHH
Q 000669 223 GSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIE 302 (1362)
Q Consensus 223 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 302 (1362)
.-.++|+|.+|+.++++-... ..-...+.+|||++.=.........+||++++..+..|..++..++++|++++.+|.+
T Consensus 135 ~~Vv~P~s~eeV~~ivk~a~~-~~ipv~prGgGts~~G~~~~~~ggivIdl~~mn~I~~id~~~~~vtVeaGv~~~~L~~ 213 (555)
T PLN02805 135 DVVVFPRSEEEVSKIVKSCNK-YKVPIVPYGGATSIEGHTLAPHGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELNE 213 (555)
T ss_pred CEEEEcCCHHHHHHHHHHHHH-CCCcEEEECCCCCCCCCccCCCCEEEEEccCCCCeEEEeCCCCEEEEeCCcCHHHHHH
Confidence 357889999999988773210 1335778899998842000012358999998776666667778999999999999999
Q ss_pred HHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccC
Q 000669 303 SLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQR 349 (1362)
Q Consensus 303 ~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp 349 (1362)
.+... ...+|. .+. ..+||||+|++...
T Consensus 214 ~L~~~--------Gl~~p~---------~p~--~~~TIGG~ia~n~~ 241 (555)
T PLN02805 214 YLEPY--------GLFFPL---------DPG--PGATIGGMCATRCS 241 (555)
T ss_pred HHHHc--------CCEeCC---------CCc--cccChhhHhhCCCc
Confidence 87653 111221 111 34799999987744
No 61
>PRK08493 NADH dehydrogenase subunit G; Validated
Probab=92.81 E-value=0.092 Score=68.88 Aligned_cols=86 Identities=20% Similarity=0.196 Sum_probs=60.2
Q ss_pred chHHHHHhhhccceeecccccccccC-CCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCCC
Q 000669 9 TLTLLLLCLSSCVITLALRVSSSVVA-KVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAG 87 (1362)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~gtk~gC~-~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~ 87 (1362)
.-|+|..++. =||..-----..+|. .|.|+.|.|.| +++++.||.+|+. +|+.|.|-..-- ...
T Consensus 16 G~til~aa~~-~gi~iP~lC~~~~~~~~G~Cr~C~VeV----------~G~~~~AC~t~v~--dGM~V~T~s~~v--~~~ 80 (819)
T PRK08493 16 GEYILNVARR-NGIFIPAICYLSGCSPTLACRLCMVEA----------DGKRVYSCNTKAK--EGMNILTNTPNL--MDE 80 (819)
T ss_pred CCHHHHHHHH-cCCccccccccCCCCCCccccceEEEE----------CCEEeccccCCCC--CCCEEEecCHHH--HHH
Confidence 3466666654 344431111234665 59999999999 6778999999984 899999942111 123
Q ss_pred ccHHHHHHHHhcCCCCCCCCch
Q 000669 88 FHPIHQRFAGFHASQCGFCTPG 109 (1362)
Q Consensus 88 ~h~iq~a~~~~~~~qCG~CtpG 109 (1362)
-+.+++.+...|--+|+.|.-+
T Consensus 81 Rk~vle~ll~~HpldC~~Cd~~ 102 (819)
T PRK08493 81 RNAIMQTYDVNHPLECGVCDKS 102 (819)
T ss_pred HHHHHHHHHhccCCCCCcCCCC
Confidence 3678889999999999999864
No 62
>PRK06259 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Provisional
Probab=92.39 E-value=0.18 Score=63.16 Aligned_cols=57 Identities=18% Similarity=0.200 Sum_probs=43.5
Q ss_pred CchHHHHHhhhccce---eecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEec
Q 000669 8 QTLTLLLLCLSSCVI---TLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSE 79 (1362)
Q Consensus 8 ~~~~~~~~~~~~~~~---~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvE 79 (1362)
+..|||..++..-.. +|.+ +.+|..|.||+|+|.+ +|+++.||.+++. +|..|.+..
T Consensus 29 ~~~tvl~al~~~~~~~~~~l~~---~~~C~~g~Cg~C~v~v----------~G~~~laC~~~~~--~~~~i~~~~ 88 (486)
T PRK06259 29 EGMTVLDALEYINKTYDANIAF---RSSCRAGQCGSCAVTI----------NGEPVLACKTEVE--DGMIIEPLD 88 (486)
T ss_pred CCChHHHHHHHhchhcCCCcee---cCCCCCCCCCCCEEEE----------CCeEecccccCCC--CCCEEEecC
Confidence 567888888754332 2222 5799999999999998 7888999999875 588888775
No 63
>PRK07570 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated
Probab=92.39 E-value=0.095 Score=59.56 Aligned_cols=45 Identities=11% Similarity=0.144 Sum_probs=38.9
Q ss_pred ccccccCCCCCCeeEEEEcccCCCCCccCcee------ccchHHhhHhcCCCEEEEecCCC
Q 000669 28 VSSSVVAKVVAAACVVLLSKYSPELDQVEDFT------ISSCLTLLCSVNGCSITTSEGLG 82 (1362)
Q Consensus 28 gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~------v~sCl~~~~~~~g~~i~TvEgl~ 82 (1362)
....+|.+|.||+|.|.| ||++ ..||.+.+..+.+...+|||=|.
T Consensus 53 ~fr~sCr~~iCGsCam~I----------NG~p~~~~~~~LAC~t~~~~~~~~~~i~iePl~ 103 (250)
T PRK07570 53 AFDHDCREGICGMCGLVI----------NGRPHGPDRGTTTCQLHMRSFKDGDTITIEPWR 103 (250)
T ss_pred eEeccccCCcCCcceeEE----------CCccCCCCcccchhhhhhhhcCCCCeEEEEECC
Confidence 457999999999999999 9999 89999998888654568899884
No 64
>COG0479 FrdB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion]
Probab=92.12 E-value=0.13 Score=57.31 Aligned_cols=60 Identities=22% Similarity=0.218 Sum_probs=48.1
Q ss_pred hHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCC
Q 000669 10 LTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGN 83 (1362)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~ 83 (1362)
|+.|.++++-=.-+| .....|.+|.||+|.+.| ||++..||.+.+.++... ++|||=|.+
T Consensus 33 LdaL~~Ik~e~d~~L---sfr~sCR~gICGSCam~I----------NG~prLAC~t~~~~~~~~-~i~iePL~~ 92 (234)
T COG0479 33 LDALLYIKEEQDPTL---SFRRSCREGICGSCAMNI----------NGKPRLACKTLMKDLEEG-VITIEPLPN 92 (234)
T ss_pred HHHHHHHHHhcCCcc---chhhhccCCcCCcceeEE----------CCccccchhchhhhccCC-ceEEEECCC
Confidence 566666666333333 346899999999999999 999999999999998766 889998874
No 65
>PRK12575 succinate dehydrogenase iron-sulfur subunit; Provisional
Probab=91.55 E-value=0.14 Score=57.73 Aligned_cols=59 Identities=14% Similarity=0.022 Sum_probs=43.8
Q ss_pred chHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCC
Q 000669 9 TLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGN 83 (1362)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~ 83 (1362)
-|++|.++.. -.=+|. ...+|.+|.||+|.|+| ||++..+|.+.+-.+.+ -+|||=|.+
T Consensus 36 vld~L~~ik~-~d~~l~---fr~sCr~giCGsCa~~i----------NG~~~LaC~t~~~~~~~--~i~iePl~~ 94 (235)
T PRK12575 36 LLDVLGRVKA-QDETLS---YRRSCREGICGSDAMNI----------NGRNGLACLTNMQALPR--EIVLRPLPG 94 (235)
T ss_pred HHHHHHHHHh-cCCCee---eeccCCCCCCCCCeeEE----------CCeEcchhhCcHhHcCC--CEEEeECCC
Confidence 3455555542 133333 35799999999999999 99999999999998843 368998854
No 66
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=91.35 E-value=0.42 Score=60.56 Aligned_cols=83 Identities=8% Similarity=0.123 Sum_probs=55.7
Q ss_pred ceEEecCCHHHHHHHHHcccCCCCCCeEEEec-Ccccccccc-cCCC-CeeEeCCCCCCCcceeecCCeEEecccccHHH
Q 000669 223 GSWHNPISVQELQNLLESHEDNNQTSIKLVVG-NTGMGYYKE-VEHY-DKYIDIRYIPELSMIRRDETGIEIGATVTISK 299 (1362)
Q Consensus 223 ~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaG-gT~l~v~k~-~~~~-~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 299 (1362)
..+++|+|.+|+.++++.... .+...++++| |.++.-.-. .... ..+||++++..+-.|..+...++++|++++.+
T Consensus 33 ~~vv~P~s~eeV~~iV~~A~~-~g~~v~v~GG~gHs~~~~a~t~~~~ggvvIdL~~Ln~il~iD~~~~tVtV~AG~~l~~ 111 (557)
T TIGR01677 33 ANVAYPKTEAELVSVVAAATA-AGRKMKVVTRYSHSIPKLACPDGSDGALLISTKRLNHVVAVDATAMTVTVESGMSLRE 111 (557)
T ss_pred CEEEecCCHHHHHHHHHHHHH-CCCeEEEEeCCCCCcCcccccCCCCCEEEEEcccCCCCEEEeCCCCEEEECCCCcHHH
Confidence 468999999999999874311 1234666655 333321111 0112 38999998665545566667999999999999
Q ss_pred HHHHHHH
Q 000669 300 AIESLKE 306 (1362)
Q Consensus 300 l~~~~~~ 306 (1362)
|.+.+..
T Consensus 112 L~~~L~~ 118 (557)
T TIGR01677 112 LIVEAEK 118 (557)
T ss_pred HHHHHHH
Confidence 9988765
No 67
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=90.99 E-value=0.21 Score=64.91 Aligned_cols=83 Identities=23% Similarity=0.337 Sum_probs=52.2
Q ss_pred CchHHHHHhhhccceee-cccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 8 QTLTLLLLCLSSCVITL-ALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 8 ~~~~~~~~~~~~~~~~~-~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
+..|||..|+.. ||++ .|-.-..-|..|.|+.|.|.|. | ..+.+.||.+++ -+|+.|.| . +.
T Consensus 17 ~g~ti~~a~~~~-g~~ip~~c~~~~~~~~g~C~~C~V~v~------g--~~~~~~aC~t~~--~~Gm~v~t----~--~~ 79 (652)
T PRK12814 17 PGTSILEAAASA-GITIPTLCFHQELEATGSCWMCIVEIK------G--KNRFVPACSTAV--SEGMVIET----E--NA 79 (652)
T ss_pred CcCcHHHHHHHc-CCccccccCCCCCCCccccceeEEEEC------C--CcceecCcCCCC--CCCCEEEe----C--cH
Confidence 456777777664 4441 1112223345799999999991 1 123589999998 48999999 2 34
Q ss_pred CccHHHHHHHHhcCCC-CCCCC
Q 000669 87 GFHPIHQRFAGFHASQ-CGFCT 107 (1362)
Q Consensus 87 ~~h~iq~a~~~~~~~q-CG~Ct 107 (1362)
.+..+|+...+.-.++ |++|.
T Consensus 80 ~~~~~r~~~le~l~~~~c~~C~ 101 (652)
T PRK12814 80 ELHAMRRQSLERLIEQHCGDCL 101 (652)
T ss_pred HHHHHHHHHHHHHHhhcccccC
Confidence 6667774444433333 88885
No 68
>PF13510 Fer2_4: 2Fe-2S iron-sulfur cluster binding domain; PDB: 1Y56_A 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A.
Probab=90.82 E-value=0.22 Score=46.71 Aligned_cols=57 Identities=19% Similarity=0.258 Sum_probs=32.8
Q ss_pred chHHHHHhhhccceee-ccccc----ccccCCCCCCeeEEEEcccCCCCCccCcee-ccchHHhhHhcCCCEEEEe
Q 000669 9 TLTLLLLCLSSCVITL-ALRVS----SSVVAKVVAAACVVLLSKYSPELDQVEDFT-ISSCLTLLCSVNGCSITTS 78 (1362)
Q Consensus 9 ~~~~~~~~~~~~~~~~-~l~gt----k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~-v~sCl~~~~~~~g~~i~Tv 78 (1362)
.-|||..|+. .||.+ .+-.. +.-|..|.|+.|.|.| ++++ +.||.+++. +|+.|.|-
T Consensus 18 G~til~al~~-~gi~ip~~c~~~~~r~~~~~~g~C~~C~Vev----------~g~~~v~AC~t~v~--~GM~V~T~ 80 (82)
T PF13510_consen 18 GETILEALLA-AGIDIPRLCYHGRPRGGLCPIGSCRLCLVEV----------DGEPNVRACSTPVE--DGMVVETQ 80 (82)
T ss_dssp T-BHHHHHHH-TT--B-EETTTS-EEBSSSSSTT-SS-EEEE----------SSEEEEETTT-B----TTEEEE--
T ss_pred CCHHHHHHHH-CCCeEEEeeeccCcccccCCccccceEEEEE----------CCCcceEcccCCCc--CCcEEEEe
Confidence 3455555543 34442 12222 5568899999999999 5666 999999975 69999884
No 69
>cd00207 fer2 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.
Probab=89.74 E-value=0.21 Score=46.47 Aligned_cols=54 Identities=17% Similarity=0.112 Sum_probs=37.4
Q ss_pred CchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCC--------CCccCceeccchHHhh
Q 000669 8 QTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPE--------LDQVEDFTISSCLTLL 67 (1362)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~--------~~~~~~~~v~sCl~~~ 67 (1362)
+.-+||..++. .+|. ...+|+.|.||+|.|.|.+-+.. ........+.||.+.+
T Consensus 16 ~g~~ll~al~~-~g~~-----~~~~C~~g~Cg~C~v~v~~G~~~~~~~~~~~~~~~~~~~~LaC~~~~ 77 (84)
T cd00207 16 EGETLLDAARE-AGID-----IPYSCRAGACGTCKVEVVEGEVDQSDPSLLDEEEAEGGYVLACQTRV 77 (84)
T ss_pred CCCcHHHHHHH-cCCC-----cccCCCCcCCcCCEEEEeeCccccCcccCCCHHHHhCCeEEEEeCee
Confidence 45688888887 7766 56899999999999999532211 1112345678888766
No 70
>PRK09970 xanthine dehydrogenase subunit XdhA; Provisional
Probab=88.98 E-value=5.9 Score=52.61 Aligned_cols=61 Identities=21% Similarity=0.249 Sum_probs=49.3
Q ss_pred CCCCCcEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE-------ccCCCCCCCccCc
Q 000669 767 YMETQTALAVPDEDNCMVVYSSTQCP-----ENVHATISRCLGIPQHNVRVIT-------RRLGGGFGGKFLN 827 (1362)
Q Consensus 767 ~mEp~~avA~~~~dg~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~-------~~vGGgFG~K~~~ 827 (1362)
.++..++....+.||.++|++++... ..+.+.+|+.||+|.++|+|+. ++-+|.||++.+.
T Consensus 457 ~~~~~~a~v~i~~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t~ 529 (759)
T PRK09970 457 GLEIAGARLLMNQDGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQSY 529 (759)
T ss_pred CCCcceEEEEEccCceEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhHH
Confidence 36677788888889999999998544 4457889999999999999984 4667888888754
No 71
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=88.92 E-value=2.7 Score=49.86 Aligned_cols=84 Identities=11% Similarity=0.075 Sum_probs=59.3
Q ss_pred cccccC-CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceee---cCC--eE
Q 000669 216 WMLLDV-KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRR---DET--GI 289 (1362)
Q Consensus 216 ~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~---~~~--~l 289 (1362)
++.+++ .-.|+.|.|.+|+.++++-... ..-...+|.||+-+.+-. ..+..+|-+ + |+.++. .++ .+
T Consensus 14 t~riGG~A~~~~~p~~~~el~~~~~~~~~-~~~p~~vlG~GSNlLv~D--~~~g~vI~~-~---~~~~~~~~~~~~~~~v 86 (334)
T PRK00046 14 TFGIDARARHLVEAESEEQLLEALADARA-AGLPVLVLGGGSNVLFTE--DFDGTVLLN-R---IKGIEVLSEDDDAWYL 86 (334)
T ss_pred eeccCcEEeEEEeeCCHHHHHHHHHHHHH-cCCCEEEEeceEEEEECC--CCCEEEEEe-c---CCceEEEecCCCeEEE
Confidence 456666 5678899999999998873211 134588899999987643 245667775 3 444444 333 69
Q ss_pred EecccccHHHHHHHHHH
Q 000669 290 EIGATVTISKAIESLKE 306 (1362)
Q Consensus 290 ~IGA~vTl~~l~~~~~~ 306 (1362)
++||++.+.++......
T Consensus 87 ~a~AG~~~~~l~~~~~~ 103 (334)
T PRK00046 87 HVGAGENWHDLVLWTLQ 103 (334)
T ss_pred EEEcCCcHHHHHHHHHH
Confidence 99999999999987654
No 72
>TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit. This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA.
Probab=88.29 E-value=4.6 Score=53.45 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=46.7
Q ss_pred CCCCcEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEEcc------CCCCCCCccC
Q 000669 768 METQTALAVPDEDNCMVVYSSTQCP-----ENVHATISRCLGIPQHNVRVITRR------LGGGFGGKFL 826 (1362)
Q Consensus 768 mEp~~avA~~~~dg~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~~------vGGgFG~K~~ 826 (1362)
..+.++.+..++||.++|+++++.. ..++..+|+.||+|.++|+|.... -+|.+|++.+
T Consensus 442 ~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t 511 (746)
T TIGR03194 442 EPHATVALKLDFDGGITLLTGAADIGQGSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVT 511 (746)
T ss_pred CCCceEEEEEcCCccEEEEEcCCCCCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHH
Confidence 3456777778888999999888655 456788999999999999998654 5777887765
No 73
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=87.92 E-value=0.98 Score=54.08 Aligned_cols=86 Identities=16% Similarity=0.147 Sum_probs=56.0
Q ss_pred CCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHHHHHHhhhcccchhhhhHHHHHHH
Q 000669 246 QTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIAEH 325 (1362)
Q Consensus 246 ~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~ 325 (1362)
+-..++.+|||.... . ......+||++++.....++.++..++++|++++.+|.+.+... ...+|.
T Consensus 18 ~~~v~~~GgGt~~~~-g-~~~~~~vldl~~ln~Ile~d~~~~~vtV~AG~~l~el~~~L~~~--------G~~lp~---- 83 (352)
T PRK11282 18 GTPLRIRGGGSKDFY-G-RALAGEVLDTRAHRGIVSYDPTELVITARAGTPLAELEAALAEA--------GQMLPF---- 83 (352)
T ss_pred CCeEEEECCCCCCCC-C-CCCCCeEEEcccCCCcEEEcCCCCEEEECCCCCHHHHHHHHHHc--------CCeeCC----
Confidence 446888999985421 1 11234589999876555556677899999999999999887652 011110
Q ss_pred HHhhhccchhcccccCCceecccC
Q 000669 326 MEKIASTFIRNSASVGGNLVMAQR 349 (1362)
Q Consensus 326 ~~~ias~qIRN~aTiGGNI~~asp 349 (1362)
--+.....+||||+|++...
T Consensus 84 ----~p~~~~~~~TIGG~iatg~~ 103 (352)
T PRK11282 84 ----EPPHFGGGATLGGMVAAGLS 103 (352)
T ss_pred ----CCCCcCCCcEehhHHhcCCC
Confidence 01123336999999997754
No 74
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=86.85 E-value=8.3 Score=44.77 Aligned_cols=161 Identities=16% Similarity=0.191 Sum_probs=97.9
Q ss_pred cccccC-CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEeccc
Q 000669 216 WMLLDV-KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGAT 294 (1362)
Q Consensus 216 ~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~ 294 (1362)
++.+++ ...|+.|.+.+|+.++++.... ..-...+++||+-+.+... .....+|.+...- ...++.+++.|++||+
T Consensus 14 tfriGg~A~~~~~~~~~e~l~~~~~~~~~-~~~p~~ilG~GSNlLv~d~-g~~gvvi~~~~~~-~~~~~~~~~~i~a~aG 90 (291)
T COG0812 14 TFRIGGPAEVLVEPRDIEELKAALKYAKA-EDLPVLILGGGSNLLVRDG-GIGGVVIKLGKLN-FIEIEGDDGLIEAGAG 90 (291)
T ss_pred eEecCcceeEEEecCCHHHHHHHHHhhhh-cCCCEEEEecCceEEEecC-CCceEEEEccccc-ceeeeccCCeEEEccC
Confidence 355555 5679999999999998875421 1346788899888876444 2334555554432 1233344449999999
Q ss_pred ccHHHHHHHHHHhhhcccchhhhhHHHHHHHH---HhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEe
Q 000669 295 VTISKAIESLKEETKEVHFECVQVFRKIAEHM---EKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMK 371 (1362)
Q Consensus 295 vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~---~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s 371 (1362)
..+.+|....... .+..|--++ ..+|+-.+-|.|+=|+.| +|.+. +|++..
T Consensus 91 ~~~~~l~~~~~~~----------gl~GlE~l~gIPGsvGgav~mNaGAyG~Ei---------~d~~~-------~v~~ld 144 (291)
T COG0812 91 APWHDLVRFALEN----------GLSGLEFLAGIPGSVGGAVIMNAGAYGVEI---------SDVLV-------SVEVLD 144 (291)
T ss_pred CcHHHHHHHHHHc----------CCcchhhhcCCCcccchhhhccCcccccch---------heeEE-------EEEEEc
Confidence 9999999875542 344443332 223444444444444433 22221 355666
Q ss_pred CCc-eEEEehhhh-hc--CCCCCCC-ceEEEEEecCCCC
Q 000669 372 GQK-CEKFMLEEF-LE--RPPLDCR-SVLLSIEIPYWDP 405 (1362)
Q Consensus 372 ~~g-~R~vpl~dF-~~--~~~l~~~-EiI~~I~iP~~~~ 405 (1362)
.+| .++++.+|. |. ...++.. -+|+++.+-..+.
T Consensus 145 ~~G~~~~l~~~el~f~YR~S~f~~~~~vvl~v~f~L~~~ 183 (291)
T COG0812 145 RDGEVRWLSAEELGFGYRTSPFKKEYLVVLSVEFKLTKG 183 (291)
T ss_pred CCCCEEEEEHHHhCcccccCcCCCCCEEEEEEEEEeCCC
Confidence 667 789999983 32 2344444 7999998877653
No 75
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=85.52 E-value=6.3 Score=45.54 Aligned_cols=154 Identities=14% Similarity=0.164 Sum_probs=95.1
Q ss_pred cccccCCceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccc
Q 000669 216 WMLLDVKGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATV 295 (1362)
Q Consensus 216 ~~~~~~~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~v 295 (1362)
++.+.+.-+|+.|.|.+|+.++++ -...++.||+-+.+... ..+..+|-+++ .+..++.++ ++||++
T Consensus 14 t~riGG~A~~~~p~~~~~l~~~~~-------~p~~vlG~GSNlL~~D~-g~~g~vI~l~~--~~~~~~~~~---~a~AG~ 80 (273)
T PRK14651 14 TLGVGGPAELWTVETHEQLAEATE-------APYRVLGGGSNLLVSDA-GVPERVIRLGG--EFAEWDLDG---WVGGGV 80 (273)
T ss_pred EeecCceEEEEecCCHHHHHHHHC-------CCeEEEeceeEEEEcCC-CcceEEEEECC--cceeEeECC---EEECCC
Confidence 456666445555999999999985 35889999998876433 34467777653 255565543 799999
Q ss_pred cHHHHHHHHHHhhhcccchhhhhHHHHHHHHHhhhccchhcccccCCceecccCCCCCCcHHHHHHHcCCEEEEEeCCce
Q 000669 296 TISKAIESLKEETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKC 375 (1362)
Q Consensus 296 Tl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asp~~~~sDl~~~LlAldA~v~l~s~~g~ 375 (1362)
.+.++....... .+..| ++++.. =|||||.+.+...+ +-.++.-.+.. |++...+..
T Consensus 81 ~~~~l~~~~~~~----------gl~Gl----E~l~gI----PGTVGGAv~mNaGa-yG~ei~d~l~~----V~~~~~g~~ 137 (273)
T PRK14651 81 PLPGLVRRAARL----------GLSGL----EGLVGI----PAQVGGAVKMNAGT-RFGEMADALHT----VEIVHDGGF 137 (273)
T ss_pred cHHHHHHHHHHC----------CCcch----hhhcCC----CcchhhHHHhhCCc-cccChheeEEE----EEEEECCCE
Confidence 999998875542 12212 222332 27788877554442 11333333332 333343447
Q ss_pred EEEehhhh-hc--CCCCCCCceEEEEEecCCCC
Q 000669 376 EKFMLEEF-LE--RPPLDCRSVLLSIEIPYWDP 405 (1362)
Q Consensus 376 R~vpl~dF-~~--~~~l~~~EiI~~I~iP~~~~ 405 (1362)
++++-+|. |. ...++.+.||+++.+...+.
T Consensus 138 ~~~~~~e~~f~YR~S~~~~~~iIl~a~f~l~~~ 170 (273)
T PRK14651 138 HQYSPDELGFGYRHSGLPPGHVVTRVRLKLRPS 170 (273)
T ss_pred EEEEHHHccccccccCCCCCEEEEEEEEEECCC
Confidence 88899883 32 33555567999998877653
No 76
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=85.05 E-value=2.7 Score=50.54 Aligned_cols=85 Identities=8% Similarity=0.037 Sum_probs=61.8
Q ss_pred cccccC-CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeec--CCeEEec
Q 000669 216 WMLLDV-KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRD--ETGIEIG 292 (1362)
Q Consensus 216 ~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~--~~~l~IG 292 (1362)
++.+++ ...|+.|.|.+|+.++++.... +.-...+++||+.+.+-.. ..+..+|+++. +.|+.+ ++.|++|
T Consensus 26 t~~iGg~A~~~~~p~s~edl~~~l~~a~~-~~~p~~vlGgGSNlLv~D~-g~~GvVI~l~~----~~i~i~~~~~~v~vg 99 (363)
T PRK13903 26 TLRVGGPARRLVTCTSTEELVAAVRELDA-AGEPLLVLGGGSNLVIADD-GFDGTVVRVAT----RGVTVDCGGGLVRAE 99 (363)
T ss_pred EeecCccceEEEEeCCHHHHHHHHHHHHH-CCCCEEEEeCCeeEeECCC-CccEEEEEeCC----CcEEEeCCCCEEEEE
Confidence 456666 5567899999999998763211 2346889999999865332 34568899863 555554 6789999
Q ss_pred ccccHHHHHHHHHH
Q 000669 293 ATVTISKAIESLKE 306 (1362)
Q Consensus 293 A~vTl~~l~~~~~~ 306 (1362)
|++++.++.+....
T Consensus 100 AG~~~~~l~~~a~~ 113 (363)
T PRK13903 100 AGAVWDDVVARTVE 113 (363)
T ss_pred cCCCHHHHHHHHHH
Confidence 99999999887554
No 77
>TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1. Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme.
Probab=84.86 E-value=7.1 Score=52.38 Aligned_cols=135 Identities=33% Similarity=0.505 Sum_probs=124.4
Q ss_pred CCchHHHHHhhhccceeecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
.|+.+||.+||+++++| |||.||++|.||||||+| |+++||||++|+.+++|++|+|||||++ .
T Consensus 13 ~~~~~l~~~lr~~~~~~----~~k~gc~~g~cgactv~~----------dg~~~~sc~~~~~~~~g~~i~T~egl~~--~ 76 (848)
T TIGR03311 13 NEEKKLLEFLREDLRLT----GVKNGCGEGACGACTVIV----------NGKAVRACRFTTAKLAGKEITTVEGLTE--R 76 (848)
T ss_pred CCCCcHHHHHHHhcCCC----cCCCCCCCCCCCCcEEEE----------CCeEEehhhhhHHhcCCCEEEecCCCCC--C
Confidence 47899999999987766 999999999999999999 8999999999999999999999999985 3
Q ss_pred CccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHHh
Q 000669 87 GFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSFA 166 (1362)
Q Consensus 87 ~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~~ 166 (1362)
++||||+||+++|++|||||||||||++++||++ +|+| +++||+++|+|||||||||++|++|++.++
T Consensus 77 ~~~~~q~a~~~~~~~qcG~ctpg~~~~~~~ll~~-----~~~p-------~~~~i~~~l~gnlcrctgy~~i~~a~~~~~ 144 (848)
T TIGR03311 77 EKDVYAWAFAKAGAVQCGFCIPGMVISAKALLDK-----NPNP-------TEAEIKKALKGNICRCTGYVKIIKAVRLAA 144 (848)
T ss_pred CCCHHHHHHHHcCCCcCCCCchhHHHHHHHHHhc-----CCCC-------CHHHHHHHHhcCccccCChHHHHHHHHHHH
Confidence 5799999999999999999999999999999954 4666 499999999999999999999999999887
Q ss_pred hcc
Q 000669 167 ADV 169 (1362)
Q Consensus 167 ~~~ 169 (1362)
+..
T Consensus 145 ~~~ 147 (848)
T TIGR03311 145 KAF 147 (848)
T ss_pred Hhh
Confidence 643
No 78
>PLN02441 cytokinin dehydrogenase
Probab=84.75 E-value=2.1 Score=53.83 Aligned_cols=83 Identities=8% Similarity=0.123 Sum_probs=56.7
Q ss_pred ceEEecCCHHHHHHHHHcccC-CCCCCeEEEecCcccccccccCCCCeeEeCCCCCC------CcceeecCCeEEecccc
Q 000669 223 GSWHNPISVQELQNLLESHED-NNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPE------LSMIRRDETGIEIGATV 295 (1362)
Q Consensus 223 ~~~~~P~sl~eal~ll~~~~~-~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~E------L~~I~~~~~~l~IGA~v 295 (1362)
...++|+|.+|+.++++.... ...-..++.+||+++.-... .....+||++++.. ...+..+...+++||++
T Consensus 66 ~aVv~P~S~eDVa~iVr~A~~~~~~~~V~~rGgGHS~~G~a~-~~~GivIdms~Ln~i~~~~~ii~vd~~~~~VtV~aG~ 144 (525)
T PLN02441 66 AAVLYPSSVEDIASLVRAAYGSSSPLTVAARGHGHSLNGQAQ-APGGVVVDMRSLRGGVRGPPVIVVSGDGPYVDVSGGE 144 (525)
T ss_pred CEEEeCCCHHHHHHHHHHHhhccCCceEEEECCCcCCCCCcc-CCCeEEEECCCCCCcCccCceEEEcCCCCEEEEcCCC
Confidence 467899999999998885310 01223567788888742111 12468999998765 23334456789999999
Q ss_pred cHHHHHHHHHH
Q 000669 296 TISKAIESLKE 306 (1362)
Q Consensus 296 Tl~~l~~~~~~ 306 (1362)
++.++.+.+..
T Consensus 145 ~~~dv~~~l~~ 155 (525)
T PLN02441 145 LWIDVLKATLK 155 (525)
T ss_pred CHHHHHHHHHH
Confidence 99999876543
No 79
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=82.99 E-value=2.5 Score=50.36 Aligned_cols=89 Identities=17% Similarity=0.250 Sum_probs=60.6
Q ss_pred cccccC-CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCccee-ecC-CeEEec
Q 000669 216 WMLLDV-KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIR-RDE-TGIEIG 292 (1362)
Q Consensus 216 ~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~-~~~-~~l~IG 292 (1362)
++.+++ ...|+.|.|.+|+.++++.... ..-...++.||+-+.+... ..+..+|.+.++.++...+ .++ ..|++|
T Consensus 23 T~rIGG~A~~~~~p~s~~el~~~l~~~~~-~~~p~~iLG~GSNlL~~D~-g~~G~VI~l~~~~~i~i~~~~~~~~~v~ag 100 (354)
T PRK14648 23 SFRIGGAAQFWAEPRSCTQLRALIEEAQR-ARIPLSLIGGGSNVLIADE-GVPGLMLSLRRFRSLHTQTQRDGSVLVHAG 100 (354)
T ss_pred eeeeCcEEEEEEeeCCHHHHHHHHHHHHH-cCCCEEEEeceeEEEEeCC-CccEEEEEeCCcCceEEeeccCCcEEEEEE
Confidence 456666 5678999999999998874311 1335778899998866443 3557888875544442111 233 369999
Q ss_pred ccccHHHHHHHHHH
Q 000669 293 ATVTISKAIESLKE 306 (1362)
Q Consensus 293 A~vTl~~l~~~~~~ 306 (1362)
|++.+.++......
T Consensus 101 AG~~~~~Lv~~~~~ 114 (354)
T PRK14648 101 AGLPVAALLAFCAH 114 (354)
T ss_pred eCCcHHHHHHHHHH
Confidence 99999999887554
No 80
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=82.29 E-value=2 Score=50.38 Aligned_cols=87 Identities=10% Similarity=0.022 Sum_probs=61.3
Q ss_pred cccccC-CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCC--eEEec
Q 000669 216 WMLLDV-KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDET--GIEIG 292 (1362)
Q Consensus 216 ~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~--~l~IG 292 (1362)
++.+++ ...|+.|+|.+|+.++++-... +.-...+++||+-+.+... .....+|++++- .+ .+..+++ .+++|
T Consensus 14 t~~iGg~a~~~v~p~~~~dl~~~l~~~~~-~~ip~~vlG~GSNlL~~d~-g~~GvVI~l~~~-~~-~i~~~~~~~~v~v~ 89 (295)
T PRK14649 14 SWRIGGPARYFVEPTTPDEAIAAAAWAEQ-RQLPLFWLGGGSNLLVRDE-GFDGLVARYRGQ-RW-ELHEHGDTAEVWVE 89 (295)
T ss_pred EeeeCceeeEEEEcCCHHHHHHHHHHHHH-CCCCEEEEecceeEEEeCC-CcCeEEEEecCC-Cc-EEEEeCCcEEEEEE
Confidence 456666 5568889999999998763211 2346888999999866433 345688988652 24 4454444 79999
Q ss_pred ccccHHHHHHHHHH
Q 000669 293 ATVTISKAIESLKE 306 (1362)
Q Consensus 293 A~vTl~~l~~~~~~ 306 (1362)
|++++.++......
T Consensus 90 AG~~~~~l~~~~~~ 103 (295)
T PRK14649 90 AGAPMAGTARRLAA 103 (295)
T ss_pred cCCcHHHHHHHHHH
Confidence 99999999987554
No 81
>PRK07569 bidirectional hydrogenase complex protein HoxU; Validated
Probab=80.94 E-value=2.1 Score=48.42 Aligned_cols=86 Identities=16% Similarity=0.244 Sum_probs=55.7
Q ss_pred CchHHHHHhhhccceeec-ccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCC
Q 000669 8 QTLTLLLLCLSSCVITLA-LRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKA 86 (1362)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~ 86 (1362)
+.-|||..++ +-||.+- +...+.-|..|.||.|.|.|. | ....+.||.+++. +|+.|.|- ..
T Consensus 17 ~g~til~a~~-~~gi~ip~~C~~~~~~~~G~C~~C~V~v~------g--~~~~~~aC~t~v~--~Gm~v~t~------~~ 79 (234)
T PRK07569 17 EGETLLEAAR-EAGIPIPTLCHLDGLSDVGACRLCLVEIE------G--SNKLLPACVTPVA--EGMVVQTN------TP 79 (234)
T ss_pred CCCHHHHHHH-HcCCCCCcCcCCCCCCCCCccCCcEEEEC------C--CCccccCcCCCCC--CCCEEEEC------CH
Confidence 3456666654 3344431 122233456999999999991 1 1235789999976 79999983 22
Q ss_pred Ccc----HHHHHHHHhcCCCCCCCCchH
Q 000669 87 GFH----PIHQRFAGFHASQCGFCTPGM 110 (1362)
Q Consensus 87 ~~h----~iq~a~~~~~~~qCG~CtpG~ 110 (1362)
.+. -+.+.+...|-.-|.-|..+-
T Consensus 80 ~~~~~rk~~l~~ll~~h~~~C~~C~~~g 107 (234)
T PRK07569 80 RLQEYRRMIVELLFAEGNHVCAVCVANG 107 (234)
T ss_pred HHHHHHHHHHHHHHHhccccCcccCCCC
Confidence 332 355667788999999998754
No 82
>TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit. This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins.
Probab=75.56 E-value=4.4 Score=53.79 Aligned_cols=57 Identities=16% Similarity=0.169 Sum_probs=45.7
Q ss_pred CcEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEEc------cCCCCCCCccCc
Q 000669 771 QTALAVPDEDNCMVVYSSTQCP-----ENVHATISRCLGIPQHNVRVITR------RLGGGFGGKFLN 827 (1362)
Q Consensus 771 ~~avA~~~~dg~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFG~K~~~ 827 (1362)
..+.+..++||.++|+++++.. ..+.+.+|+.||+|.++|+|... +-+|.||++.+.
T Consensus 476 ~~a~v~l~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~ 543 (770)
T TIGR02416 476 DSCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRSTP 543 (770)
T ss_pred ceEEEEECCCceEEEEECCCCCCCCchHHHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHHH
Confidence 4577778888999999998765 34678889999999999999854 456888888753
No 83
>TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase.
Probab=72.87 E-value=4.8 Score=53.35 Aligned_cols=59 Identities=8% Similarity=0.041 Sum_probs=46.3
Q ss_pred CCCcEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------ccCCCCCCCccCc
Q 000669 769 ETQTALAVPDEDNCMVVYSSTQCP-----ENVHATISRCLGIPQHNVRVIT------RRLGGGFGGKFLN 827 (1362)
Q Consensus 769 Ep~~avA~~~~dg~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~------~~vGGgFG~K~~~ 827 (1362)
.+..+....++||.++|+++++.. ..+...+|+.||+|.++|+|.. +..+|.+|++.+.
T Consensus 446 ~~~~a~v~i~~dG~v~v~~g~~e~GQG~~T~laQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t~ 515 (758)
T TIGR02965 446 NQAGALVHVYTDGSIHLNHGGTEMGQGLNTKVAQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGSD 515 (758)
T ss_pred CccceEEEEeCCCcEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHHH
Confidence 445677777888999999998664 3457788999999999999984 4567778888653
No 84
>TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit. Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity.
Probab=70.87 E-value=6.8 Score=53.08 Aligned_cols=133 Identities=17% Similarity=0.270 Sum_probs=123.0
Q ss_pred CCchHHHHHhhhccceeeccccccc-ccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSS-VVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSK 85 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~-gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~ 85 (1362)
.|..+||.+||+. +|||+|. ||++|.||||||+| |+++||||++|+.+++|++|+|||||+. .
T Consensus 13 ~~~~~l~~~LR~~-----~l~~~k~~~c~~g~CGaCtv~~----------dg~~v~sC~~~~~~~~g~~i~Tiegl~~-~ 76 (951)
T TIGR03313 13 KLGENVQTLLFNM-----GMHSVRNSDDGFGFAGSDAILF----------NGVLKNASLLIAAQLEGAEVRTAESLGQ-W 76 (951)
T ss_pred CCCCCHHHHHHHC-----CCCCCcCCCCCcccCCCCEEEE----------CCeEeeHHHHHHHHcCCCEEEecCcCCC-C
Confidence 4788999999993 6669999 79999999999999 8999999999999999999999999985 5
Q ss_pred CCccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHH
Q 000669 86 AGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSF 165 (1362)
Q Consensus 86 ~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~ 165 (1362)
+.|||+|++|++++++|||||||||||++++||++ +|+| |++||+++|+|||||||||++|++|++.+
T Consensus 77 ~~~~~~q~af~~~~a~QCG~CtpG~~~~~~~ll~~-----~~~p-------~~~~i~~~l~gnlcrctgy~~i~~av~~~ 144 (951)
T TIGR03313 77 NQLSLVQQAMVDVGVVQSGYNDPAAALILTDLLDR-----NTQP-------NRAEIDDALSGLFSRDAGYQQFYQVIELA 144 (951)
T ss_pred CCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhc-----CCCC-------CHHHHHHHHhcceeccCCcHHHHHHHHHH
Confidence 68999999999999999999999999999999954 4666 59999999999999999999999999987
Q ss_pred hh
Q 000669 166 AA 167 (1362)
Q Consensus 166 ~~ 167 (1362)
+.
T Consensus 145 ~~ 146 (951)
T TIGR03313 145 VK 146 (951)
T ss_pred HH
Confidence 65
No 85
>PRK09800 putative hypoxanthine oxidase; Provisional
Probab=70.78 E-value=8.3 Score=52.28 Aligned_cols=134 Identities=16% Similarity=0.248 Sum_probs=123.3
Q ss_pred CCchHHHHHhhhccceeecccccccc-cCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCC
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSV-VAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSK 85 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~g-C~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~ 85 (1362)
.|..+||.+||+ + +|||||.| |++|.||||||+| |+++||||++|+.+++|++|+|||||+. .
T Consensus 17 ~~~~~l~~~LR~-~----~~~~~k~g~c~~g~CGaCtv~~----------dg~~v~sC~~~~~~~~g~~i~Tvegl~~-~ 80 (956)
T PRK09800 17 NPGENVQKLLFN-M----GMHSVRNSDDGFGFAGSDAIIF----------NGNIVNASLLIAAQLEKADIRTAESLGK-W 80 (956)
T ss_pred CCCCCHHHHHHH-C----CCCccccCCCCcccCCCCEEEE----------CCeEEeHHHHHHHHcCCCEEEecCCcCC-C
Confidence 478899999998 5 45599998 8999999999999 8999999999999999999999999986 5
Q ss_pred CCccHHHHHHHHhcCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhhCCcccCCCChhHHHHHHHH
Q 000669 86 AGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSF 165 (1362)
Q Consensus 86 ~~~h~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgY~~I~~A~~~~ 165 (1362)
+.|||+|+||+++|++|||||||||||++++||++ +|+| |++||+++|+|||||||||++|++|++.+
T Consensus 81 ~~~~~~q~af~~~~~~QCG~CtpG~~m~~~~ll~~-----~~~p-------~~~~i~~~l~gnlCRCtgy~~i~~av~~~ 148 (956)
T PRK09800 81 NELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDR-----IAAP-------TREEIDDALSGLFSRDAGWQQYYQVIELA 148 (956)
T ss_pred CCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhc-----CCCC-------CHHHHHHHHhhchhccCCcHHHHHHHHHH
Confidence 68999999999999999999999999999999954 4666 59999999999999999999999999887
Q ss_pred hhc
Q 000669 166 AAD 168 (1362)
Q Consensus 166 ~~~ 168 (1362)
+..
T Consensus 149 ~~~ 151 (956)
T PRK09800 149 VAR 151 (956)
T ss_pred HHh
Confidence 653
No 86
>PF00111 Fer2: 2Fe-2S iron-sulfur cluster binding domain; InterPro: IPR001041 The ferredoxin protein family are electron carrier proteins with an iron-sulphur cofactor that act in a wide variety of metabolic reactions. Ferredoxins can be divided into several subgroups depending upon the physiological nature of the iron-sulphur cluster(s) and according to sequence similarities. This entry represents members of the 2Fe-2S ferredoxin family that have a general core structure consisting of beta(2)-alpha-beta(2), which includes putidaredoxin and terpredoxin, and adrenodoxin [, , , ]. They are proteins of around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This conserved region is also found as a domain in various metabolic enzymes and in multidomain proteins, such as aldehyde oxidoreductase (N-terminal), xanthine oxidase (N-terminal), phthalate dioxygenase reductase (C-terminal), succinate dehydrogenase iron-sulphur protein (N-terminal), and methane monooxygenase reductase (N-terminal).; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding; PDB: 3M9S_C 2FUG_L 3IAS_L 2YBB_3 3IAM_3 3I9V_3 1JQ4_A 1DOX_A 1DOY_A 2KAJ_A ....
Probab=65.09 E-value=4.5 Score=37.11 Aligned_cols=32 Identities=19% Similarity=-0.046 Sum_probs=24.1
Q ss_pred chH-HHHHhhhcc-ceeecccccccccCCCCCCeeEEEEc
Q 000669 9 TLT-LLLLCLSSC-VITLALRVSSSVVAKVVAAACVVLLS 46 (1362)
Q Consensus 9 ~~~-~~~~~~~~~-~~~~~l~gtk~gC~~G~CGaCtV~~~ 46 (1362)
.-+ ||..+++ . +| +...+|+.|.||.|.|.|.
T Consensus 15 ~~~~ll~~~~~-~~gi-----~i~~~C~~g~Cg~C~v~v~ 48 (78)
T PF00111_consen 15 GETLLLDALER-AGGI-----GIPYSCGGGGCGTCRVRVL 48 (78)
T ss_dssp TSBBHHHHHHH-TTTT-----TSTTSSSSSSSSTTEEEEE
T ss_pred CccHHHHHHHH-cCCC-----CcccCCCCCccCCcEEEEe
Confidence 345 6666664 4 44 5679999999999999884
No 87
>PLN00192 aldehyde oxidase
Probab=64.29 E-value=2e+02 Score=40.96 Aligned_cols=60 Identities=23% Similarity=0.148 Sum_probs=46.6
Q ss_pred CCCcEEEEEcCCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCCccCCCCCcccccccc
Q 000669 1049 KSSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSES 1127 (1362)
Q Consensus 1049 ~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~~p~~~~t~gS~~t~~ 1127 (1362)
.+..+....+.||.++|+++. |.. +.+...+|+.||+ |.++|+|+. +.-+|.+|++.+..
T Consensus 762 Ep~~~vA~~~~dg~l~V~~sT----Q~p-~~~r~~vA~~Lgi--------p~~~VrV~~------~~vGGgFGgK~~~~ 821 (1344)
T PLN00192 762 ETQTALALPDEDNCIVVYSST----QCP-EYVHSVIARCLGI--------PEHNVRVIT------RRVGGGFGGKAVKS 821 (1344)
T ss_pred cCceEEEEEcCCCCEEEEECC----CCH-HHHHHHHHHHhCC--------ChHHEEEEe------cccccCCCcccccc
Confidence 356777777888999999986 444 4567788999999 999999985 45678888886543
No 88
>PLN02906 xanthine dehydrogenase
Probab=60.82 E-value=16 Score=51.54 Aligned_cols=60 Identities=15% Similarity=0.086 Sum_probs=46.9
Q ss_pred CCCCcEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------ccCCCCCCCccCc
Q 000669 768 METQTALAVPDEDNCMVVYSSTQCP-----ENVHATISRCLGIPQHNVRVIT------RRLGGGFGGKFLN 827 (1362)
Q Consensus 768 mEp~~avA~~~~dg~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~------~~vGGgFG~K~~~ 827 (1362)
+.+..+.+..+.||.++|+++++.. ..+...+|+.||+|.++|+|.. +..+|.+|++.+.
T Consensus 1010 ~~~~~a~V~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~d~V~v~~~DT~~~p~~~gT~aSr~t~ 1080 (1319)
T PLN02906 1010 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFISETSTDKVPNASPTAASASSD 1080 (1319)
T ss_pred CCccceEEEEcCCceEEEEECCccCCCChHHHHHHHHHHHHCCCHHHEEEEccCCCCCCCCCCCccchhhH
Confidence 4556677888888999999987544 3357788999999999999985 4567888888753
No 89
>TIGR02969 mam_aldehyde_ox aldehyde oxidase. Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.
Probab=60.08 E-value=12 Score=52.64 Aligned_cols=59 Identities=20% Similarity=0.149 Sum_probs=47.0
Q ss_pred CCCCcEEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEEc------cCCCCCCCccC
Q 000669 768 METQTALAVPDEDNCMVVYSSTQCP-----ENVHATISRCLGIPQHNVRVITR------RLGGGFGGKFL 826 (1362)
Q Consensus 768 mEp~~avA~~~~dg~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFG~K~~ 826 (1362)
+...++++..+.||.++|+.+++.. ..+...+|+.||||.++|+|... .-+|.+|++.+
T Consensus 1015 ~~~~~a~v~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~gSr~t 1084 (1330)
T TIGR02969 1015 MGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGTSTETVPNTNASGGSVVA 1084 (1330)
T ss_pred CCCccEEEEEcCCceEEEEECCcCcCCChHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCCchHHHH
Confidence 4456778888888999999998655 34578889999999999999854 45788888865
No 90
>TIGR03196 pucD xanthine dehydrogenase D subunit. This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin.
Probab=59.76 E-value=16 Score=48.66 Aligned_cols=56 Identities=11% Similarity=0.039 Sum_probs=43.2
Q ss_pred cEEEEECCCCc--EEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------ccCCCCCCCccCc
Q 000669 772 TALAVPDEDNC--MVVYSSTQCP-----ENVHATISRCLGIPQHNVRVIT------RRLGGGFGGKFLN 827 (1362)
Q Consensus 772 ~avA~~~~dg~--l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~------~~vGGgFG~K~~~ 827 (1362)
.+.+..++||. ++|+++++.. ..+.+.+|+.||+|.++|+|.. +.-+|.+|++.+.
T Consensus 467 ~a~v~l~~dGsv~v~v~~g~~d~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~ 535 (768)
T TIGR03196 467 GARLELAEDGTVKIRAHFACAECGQGFLAAAEQIAMEELGCAAEDISIAIADTAKGPKAGSSSASRGTS 535 (768)
T ss_pred cEEEEEeCCCCeEEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCchhhhhH
Confidence 56777777884 8899877554 3457788999999999999984 4567888888764
No 91
>PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1.2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N ....
Probab=58.85 E-value=12 Score=47.80 Aligned_cols=57 Identities=26% Similarity=0.383 Sum_probs=38.7
Q ss_pred CCcEEEEECCCCcEEEEeCC----CChH-HHHHHHHHHhCCCCccEEEEEcc------CCCCCCCccC
Q 000669 770 TQTALAVPDEDNCMVVYSST----QCPE-NVHATISRCLGIPQHNVRVITRR------LGGGFGGKFL 826 (1362)
Q Consensus 770 p~~avA~~~~dg~l~V~~st----Q~p~-~~r~~vA~~Lglp~~kVrV~~~~------vGGgFG~K~~ 826 (1362)
..++....++||.++|+++. |... .+...+|+.||+|+++|+|.... -+|.+|++.+
T Consensus 319 ~~~a~v~l~~DG~v~v~~~~~e~GqG~~T~~~qiaAe~Lgi~~~~V~v~~~dT~~~p~~~~t~gSr~t 386 (547)
T PF02738_consen 319 QSSARVRLNPDGSVTVYTGGVEMGQGSRTALAQIAAEELGIPPEDVRVVSGDTDTTPYDGGTGGSRST 386 (547)
T ss_dssp EEEEEEEE-TTS-EEEEES--BSSSSHHHHHHHHHHHHHTS-GGGEEEEECBTTTS-SB--S-TTTHH
T ss_pred CCcEEEEEEeCCCEEEEEecccCCcchhhhHHHHHHHHhCCChhhEEEEeCCCcCCCCCCCCccchhh
Confidence 34677778889999999887 4444 45788899999999999998544 4577777764
No 92
>PRK07860 NADH dehydrogenase subunit G; Validated
Probab=50.86 E-value=9.4 Score=51.03 Aligned_cols=90 Identities=14% Similarity=0.141 Sum_probs=57.9
Q ss_pred chHHHHHhhhcccee-ecccccccccCCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEe---cCCCCC
Q 000669 9 TLTLLLLCLSSCVIT-LALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTS---EGLGNS 84 (1362)
Q Consensus 9 ~~~~~~~~~~~~~~~-~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv---Egl~~~ 84 (1362)
..|+|.-++. .||. =.|...+..+.-|.|.-|.|.|. | ..+.+.||.+|+. +|+.|.|- |-+.+
T Consensus 19 g~til~aa~~-~gi~ip~~C~~~~l~~~g~Cr~C~Vev~------g--~~~~~~aC~t~v~--~gm~V~t~~~s~~v~~- 86 (797)
T PRK07860 19 GTLVIRAAEL-LGIQIPRFCDHPLLDPVGACRQCLVEVE------G--QRKPQASCTTTVT--DGMVVKTQLTSPVADK- 86 (797)
T ss_pred CChHHHHHHH-cCCCCCeecCCCCCCCCcccCccEEEEC------C--CcccccccCCCCC--CCcEEEeCCCCHHHHH-
Confidence 3455554432 2332 13445566677899999999991 1 1246889999976 79999993 22211
Q ss_pred CCCccHHHHHHHHhcCCCCCCCCchHHH
Q 000669 85 KAGFHPIHQRFAGFHASQCGFCTPGMCM 112 (1362)
Q Consensus 85 ~~~~h~iq~a~~~~~~~qCG~CtpG~vm 112 (1362)
.=.-+.+-+..+|--.|..|.-+-=+
T Consensus 87 --~r~~~le~ll~~hp~dC~~C~~~g~C 112 (797)
T PRK07860 87 --AQHGVMELLLINHPLDCPVCDKGGEC 112 (797)
T ss_pred --HHHHHHHHHHhcCCCCCCCCCCCCCc
Confidence 11345566778899999999876433
No 93
>PF02594 DUF167: Uncharacterised ACR, YggU family COG1872; InterPro: IPR003746 This entry describes proteins of unknown function. Structures for two of these proteins, YggU from Escherichia coli and MTH637 from the archaea Methanobacterium thermoautotrophicum, have been determined; they have a core 2-layer alpha/beta structure consisting of beta(2)-loop-alpha-beta(2)-alpha [, ].; PDB: 1YH5_A 1N91_A 1JRM_A.
Probab=48.16 E-value=65 Score=30.02 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=41.1
Q ss_pred cEEEEEcCCCcEEEEeCCcccCCChhHHHHHHHHHHhCCCCCCCCCCCCCcEEEEcCCCCC
Q 000669 1052 PGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLS 1112 (1362)
Q Consensus 1052 ~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aqiaA~~Lgi~~~~~~~~p~~~V~v~~~dT~~ 1112 (1362)
+....++.||.+.|.....+..-=.+..+.+..|+.||+ |..+|.+..+.|..
T Consensus 17 ~~i~~~~~~~~l~i~v~app~~GkAN~ali~~La~~l~v--------~ks~i~i~~G~~Sr 69 (77)
T PF02594_consen 17 NAIVGVEGDGALKIRVTAPPVDGKANKALIRFLAKALGV--------PKSDIEIVSGHTSR 69 (77)
T ss_dssp -EEEEE-TTT-EEEEBSTTCCCCCHHHHHHHHHHHHCT----------TTCEEECC-CCCS
T ss_pred cccccccCceEEEEEEecCCCcChhHHHHHHHHHHHhCC--------CcccEEEEecCCCC
Confidence 445567778999999999988888899999999999999 99999999887753
No 94
>PRK09129 NADH dehydrogenase subunit G; Validated
Probab=44.68 E-value=25 Score=47.02 Aligned_cols=89 Identities=15% Similarity=0.204 Sum_probs=57.5
Q ss_pred chHHHHHhhhccceee-cccccccccCCCCCCeeEEEEcccCCCCCccCc--eeccchHHhhHhcCCCEEEEecCCCCCC
Q 000669 9 TLTLLLLCLSSCVITL-ALRVSSSVVAKVVAAACVVLLSKYSPELDQVED--FTISSCLTLLCSVNGCSITTSEGLGNSK 85 (1362)
Q Consensus 9 ~~~~~~~~~~~~~~~~-~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~--~~v~sCl~~~~~~~g~~i~TvEgl~~~~ 85 (1362)
.-|||.-|+. +||++ .|.-.+.-=..|.|.-|.|.+ ++ +.+.||.+|+. +|+.|.|- .
T Consensus 16 g~~il~a~~~-~g~~ip~~c~~~~~~~~~~C~~C~v~v----------~~~~~~~~aC~~~~~--~gm~v~t~------~ 76 (776)
T PRK09129 16 GSMVIEAADK-AGIYIPRFCYHKKLSIAANCRMCLVEV----------EKAPKPLPACATPVT--DGMKVFTR------S 76 (776)
T ss_pred CCHHHHHHHH-cCCCCCcccCCCCCCCCCCcceeEEEE----------CCCCCcCcccCCCCC--CCCEEEcC------C
Confidence 3456665544 66654 222211111257899999999 33 35899999976 69999992 2
Q ss_pred CCc----cHHHHHHHHhcCCCCCCCCchHHHHHHH
Q 000669 86 AGF----HPIHQRFAGFHASQCGFCTPGMCMSLFS 116 (1362)
Q Consensus 86 ~~~----h~iq~a~~~~~~~qCG~CtpG~vm~~~~ 116 (1362)
..+ .-+-+.+..+|--.|..|.-+--+-+-.
T Consensus 77 ~~~~~~r~~~l~~ll~~h~~~C~~c~~~g~C~Lq~ 111 (776)
T PRK09129 77 EKALKAQKSVMEFLLINHPLDCPICDQGGECQLQD 111 (776)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHH
Confidence 223 2345567788999999999877554443
No 95
>PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed
Probab=43.15 E-value=8.9 Score=43.63 Aligned_cols=16 Identities=19% Similarity=0.104 Sum_probs=14.3
Q ss_pred ccccCCCCCCeeEEEE
Q 000669 30 SSVVAKVVAAACVVLL 45 (1362)
Q Consensus 30 k~gC~~G~CGaCtV~~ 45 (1362)
..+|+.|.||+|.|.+
T Consensus 214 ~m~cg~G~C~~C~~~~ 229 (250)
T PRK00054 214 RMKCGIGACGACVCDT 229 (250)
T ss_pred cccCcCcccCcCCccc
Confidence 5589999999999986
No 96
>PF10437 Lip_prot_lig_C: Bacterial lipoate protein ligase C-terminus; InterPro: IPR019491 This is the C-terminal domain of a bacterial lipoate protein ligase. There is no conservation between this C terminus and that of vertebrate lipoate protein ligase C-termini, but both are associated with IPR004143 from INTERPRO, further upstream. This C-terminal domain is more stable than IPR004143 from INTERPRO and the hypothesis is that the C-terminal domain has a role in recognising the lipoyl domain and/or transferring the lipoyl group onto it from the lipoyl-AMP intermediate. C-terminal fragments of length 172 to 193 amino acid residues are observed in the eubacterial enzymes whereas in their archaeal counterparts the C-terminal segment is significantly smaller, ranging in size from 87 to 107 amino acid residues. ; PDB: 1X2G_A 3A7R_A 3A7A_A 1X2H_C 1VQZ_A 3R07_C.
Probab=42.98 E-value=1e+02 Score=28.98 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=34.6
Q ss_pred CceeeeeEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHH
Q 000669 452 RIMVNNCQLAFGAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILL 497 (1362)
Q Consensus 452 ~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l 497 (1362)
+++|++++|.=-.+... . ..++|+.|.|.+++.+.+.+++..+
T Consensus 26 ~G~I~~i~i~gDf~~~~-~--i~~le~~L~G~~~~~~~i~~~l~~~ 68 (86)
T PF10437_consen 26 NGIIKDIKIYGDFFGPE-D--IEELEEALIGCPYDREAIKEALNSV 68 (86)
T ss_dssp TTEEEEEEEEECBS-CC-C--HHHHHHHHTTCBSSHHHHHHHHHHC
T ss_pred CCEEEEEEEECCCCCch-H--HHHHHHHHHhcCCCHHHHHHHHHHh
Confidence 58999999954344433 3 7899999999999999999998876
No 97
>TIGR01973 NuoG NADH-quinone oxidoreductase, chain G. This model represents the G subunit (one of 14: A-N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria while translocating protons, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This model excludes related subunits from formate dehydrogenase complexes.
Probab=42.85 E-value=20 Score=46.43 Aligned_cols=81 Identities=23% Similarity=0.368 Sum_probs=53.8
Q ss_pred chHHHHHhhhccceeecccccccccC------CCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCC
Q 000669 9 TLTLLLLCLSSCVITLALRVSSSVVA------KVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLG 82 (1362)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~ 82 (1362)
.-|||..++ +.||.. -.=|. .|.|.-|.|.+. |+ ..+.+.||.+|+. +|+.|.|-
T Consensus 13 g~~il~a~~-~~gi~i-----p~~C~~~~l~~~g~Cr~C~v~v~------g~-~~~~~~aC~~~~~--~gm~v~t~---- 73 (603)
T TIGR01973 13 GTTVLQACL-SAGIEI-----PRFCYHEKLSIAGNCRMCLVEVE------KF-PDKPVASCATPVT--DGMKISTN---- 73 (603)
T ss_pred CCHHHHHHH-HcCCCc-----cccCCCCCCCCCCccccCEEEEC------CC-CCCcccccCCCCC--CCCEEEeC----
Confidence 345666554 345542 12453 899999999992 10 0127999999976 69999992
Q ss_pred CCCCCccH----HHHHHHHhcCCCCCCCCchH
Q 000669 83 NSKAGFHP----IHQRFAGFHASQCGFCTPGM 110 (1362)
Q Consensus 83 ~~~~~~h~----iq~a~~~~~~~qCG~CtpG~ 110 (1362)
...+.. +.+.|..+|---|..|.-+-
T Consensus 74 --~~~~~~~r~~~~e~ll~~h~~dC~~C~~~g 103 (603)
T TIGR01973 74 --SEKVKKAREGVMEFLLINHPLDCPICDQGG 103 (603)
T ss_pred --CHHHHHHHHHHHHHHHhcCCCCCCcCCCCC
Confidence 233433 44556777888999999864
No 98
>cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (formi
Probab=42.11 E-value=14 Score=41.85 Aligned_cols=17 Identities=18% Similarity=0.262 Sum_probs=14.7
Q ss_pred cccccCCCCCCeeEEEE
Q 000669 29 SSSVVAKVVAAACVVLL 45 (1362)
Q Consensus 29 tk~gC~~G~CGaCtV~~ 45 (1362)
.+-+|+.|.||+|+|-.
T Consensus 212 ~~m~Cg~G~C~~C~~~~ 228 (243)
T cd06192 212 SPMCCGIGICGACTIET 228 (243)
T ss_pred ccccCccccccceEEEe
Confidence 45689999999999975
No 99
>PRK10713 2Fe-2S ferredoxin YfaE; Provisional
Probab=41.05 E-value=14 Score=34.87 Aligned_cols=30 Identities=17% Similarity=0.094 Sum_probs=22.4
Q ss_pred hHHHHHhhhccceeecccccccccCCCCCCeeEEEE
Q 000669 10 LTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLL 45 (1362)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~ 45 (1362)
-|||.-++ +-||. ...+|+.|.||+|.+-+
T Consensus 20 ~tlL~a~~-~~gi~-----~p~~Cr~G~Cg~C~~~~ 49 (84)
T PRK10713 20 PSLLAALE-SHNVA-----VEYQCREGYCGSCRTRL 49 (84)
T ss_pred CcHHHHHH-HcCCC-----CCCCCCCeECCCCEeEE
Confidence 45665544 44554 57999999999999987
No 100
>TIGR02911 sulfite_red_B sulfite reductase, subunit B. Members of this protein family include the B subunit, one of three subunits, of the anaerobic sulfite reductase of Salmonella, and close homologs from various Clostridum species, where the three-gene neighborhood is preserved. Two such gene clusters are found in Clostridium perfringens, but it may be that these sets of genes correspond to the distinct assimilatory and dissimilatory forms as seen in Clostridium pasteurianum.
Probab=40.00 E-value=11 Score=43.20 Aligned_cols=19 Identities=5% Similarity=-0.074 Sum_probs=16.3
Q ss_pred ccccccccCCCCCCeeEEE
Q 000669 26 LRVSSSVVAKVVAAACVVL 44 (1362)
Q Consensus 26 l~gtk~gC~~G~CGaCtV~ 44 (1362)
.-.++-.|+.|-||+|+|-
T Consensus 222 ~~~~~m~cg~g~c~~c~~~ 240 (261)
T TIGR02911 222 SYERKMCCGVGKCGHCKID 240 (261)
T ss_pred EeccceeccCcCCCCcccC
Confidence 3468999999999999984
No 101
>PTZ00305 NADH:ubiquinone oxidoreductase; Provisional
Probab=36.31 E-value=31 Score=40.06 Aligned_cols=61 Identities=20% Similarity=0.269 Sum_probs=42.9
Q ss_pred CCCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCCCccH----HHHHHHHhcCCCCCCCCch
Q 000669 34 AKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHP----IHQRFAGFHASQCGFCTPG 109 (1362)
Q Consensus 34 ~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~~h~----iq~a~~~~~~~qCG~CtpG 109 (1362)
..|.|+-|.|.|. | ..+.+.||.+|+. +|+.|.|- +..+.. +.+-|...|-.-|.-|.-+
T Consensus 109 p~G~CRlClVEVe------G--~~~lv~AC~tpV~--eGM~V~T~------Se~v~~~Rk~vLElLLs~Hp~DC~~C~k~ 172 (297)
T PTZ00305 109 VAGNCRMCLVQVD------G--TQNLVVSCATVAL--PGMSIITD------SRLVRDAREGNVELILINHPNDCPICEQA 172 (297)
T ss_pred CCCccceeEEEEC------C--CcCcccccCCcCC--CCCEEEeC------CHHHHHHHHHHHHHHHhcCCCcCCcccCc
Confidence 4789999999992 1 2357999999976 69999982 233333 3445666777778887754
Q ss_pred H
Q 000669 110 M 110 (1362)
Q Consensus 110 ~ 110 (1362)
=
T Consensus 173 G 173 (297)
T PTZ00305 173 T 173 (297)
T ss_pred C
Confidence 3
No 102
>PF10418 DHODB_Fe-S_bind: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; InterPro: IPR019480 Lactococcus lactis is one of the few organisms with two dihydroorotate dehydrogenases (DHODs) A and B []. The B enzyme is typical of DHODs in Gram-positive bacteria that use NAD+ as the second substrate. DHODB is a heterotetramer composed of a central homodimer of PyrDB subunits resembling the DHODA structure and two PyrK subunits along with three different cofactors: FMN, FAD, and a [2Fe-2S] cluster. The [2Fe-2S] iron-sulphur cluster binds to this C-terminal domain of the PyrK subunit, which is at the interface between the flavin and NAD binding domains and contains three beta-strands. The four cysteine residues at the N-terminal part of this domain are the ones that bind, in pairs, to the iron-sulphur cluster. The conformation of the whole molecule means that the iron-sulphur cluster is localized in a well-ordered part of this domain close to the FAD binding site []. The FAD and NAD binding domains are IPR008333 from INTERPRO and IPR001433 from INTERPRO respectively. ; PDB: 1EP2_B 1EP3_B 1EP1_B.
Probab=33.49 E-value=22 Score=28.77 Aligned_cols=17 Identities=18% Similarity=0.266 Sum_probs=12.6
Q ss_pred ccccCCCCCCeeEEEEc
Q 000669 30 SSVVAKVVAAACVVLLS 46 (1362)
Q Consensus 30 k~gC~~G~CGaCtV~~~ 46 (1362)
+-+|+-|.|++|.|-..
T Consensus 3 ~M~CG~G~C~~C~v~~~ 19 (40)
T PF10418_consen 3 RMACGVGACGGCVVPVK 19 (40)
T ss_dssp --SSSSSSS-TTEEECS
T ss_pred cccCCCcEeCCcEeeee
Confidence 56899999999999873
No 103
>TIGR02008 fdx_plant ferredoxin [2Fe-2S]. This model represents single domain 2Fe-2S (also called plant type) ferredoxins. In general, these occur as a single domain proteins or with a chloroplast transit peptide. Species tend to be photosynthetic, but several forms may occur in one species and individually may not be associated with photocynthesis. Halobacterial forms differ somewhat in architecture; they score between trusted and noise cutoffs. Sequences scoring below the noise cutoff tend to be ferredoxin-related domains of larger proteins.
Probab=33.34 E-value=23 Score=34.23 Aligned_cols=32 Identities=9% Similarity=0.004 Sum_probs=23.1
Q ss_pred CchHHHHHhhhccceeecccccccccCCCCCCeeEEEE
Q 000669 8 QTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLL 45 (1362)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~ 45 (1362)
+.-+||..++.. ||. ...+|+.|.||.|.|-|
T Consensus 21 ~g~tLLda~~~~-Gi~-----i~~~C~~G~Cg~C~v~v 52 (97)
T TIGR02008 21 DDQYILDAAEEA-GID-----LPYSCRAGACSTCAGKV 52 (97)
T ss_pred CCCcHHHHHHHc-CCC-----CCcCCCCccCCCCceEE
Confidence 445666665543 443 36799999999999988
No 104
>PRK08221 anaerobic sulfite reductase subunit B; Provisional
Probab=32.10 E-value=17 Score=41.80 Aligned_cols=18 Identities=6% Similarity=-0.040 Sum_probs=15.6
Q ss_pred cccccccCCCCCCeeEEE
Q 000669 27 RVSSSVVAKVVAAACVVL 44 (1362)
Q Consensus 27 ~gtk~gC~~G~CGaCtV~ 44 (1362)
--++-.|++|.||+|+|.
T Consensus 225 ~~~~m~cg~g~c~~c~~~ 242 (263)
T PRK08221 225 YERKMCCGVGKCGHCKID 242 (263)
T ss_pred ecceeEccCcccCCcccC
Confidence 357889999999999985
No 105
>PRK09130 NADH dehydrogenase subunit G; Validated
Probab=28.85 E-value=44 Score=44.01 Aligned_cols=59 Identities=17% Similarity=0.235 Sum_probs=39.9
Q ss_pred CCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCCCccH----HHHHHHHhcCCCCCCCCc
Q 000669 35 KVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHP----IHQRFAGFHASQCGFCTP 108 (1362)
Q Consensus 35 ~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~~h~----iq~a~~~~~~~qCG~Ctp 108 (1362)
.|.|.-|.|.|... ..+.+.||.+|+. +|+.|.| . +..... +.+-+..+|---|..|.-
T Consensus 42 ~g~Cr~ClVev~~~-------~~~~~~sC~~~v~--~gm~v~T----~--s~~v~~~r~~~le~ll~~Hp~dC~~C~~ 104 (687)
T PRK09130 42 AGNCRMCLVEVKGG-------PPKPVASCAMPVG--EGMVIFT----N--TPMVKKAREGVMEFLLINHPLDCPICDQ 104 (687)
T ss_pred CCCCCCCEEEECCC-------CCCcccccCCCCC--CCCEEEe----C--CHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 69999999999210 0358999999976 7999998 2 233333 334455566666766664
No 106
>KOG2282 consensus NADH-ubiquinone oxidoreductase, NDUFS1/75 kDa subunit [Energy production and conversion]
Probab=27.91 E-value=41 Score=41.36 Aligned_cols=63 Identities=17% Similarity=0.331 Sum_probs=48.6
Q ss_pred CCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCCCCCCCccHHHHHHHHhcCCCCCCCCch
Q 000669 35 KVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSKAGFHPIHQRFAGFHASQCGFCTPG 109 (1362)
Q Consensus 35 ~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~~h~iq~a~~~~~~~qCG~CtpG 109 (1362)
-|.|--|.|.|-+ .-++|-||-||+ +.|+.|.|=--+.. ..-.-+.+-|.-+|-.-|.-|--|
T Consensus 73 agncrmclvevek--------spkpva~campv--m~g~~iktns~~~k--karegvmefll~nhpldcpicdqg 135 (708)
T KOG2282|consen 73 AGNCRMCLVEVEK--------SPKPVAACAMPV--MKGWKIKTNSDKSK--KAREGVMEFLLMNHPLDCPICDQG 135 (708)
T ss_pred ccceeEEEEEecc--------CCCcchhhcccc--cCCceeecCchHHH--HHHHHHHHHHHhCCCCCCCccCCC
Confidence 4899999999943 346899999996 57999999655532 122447788888999999998876
No 107
>CHL00134 petF ferredoxin; Validated
Probab=26.84 E-value=38 Score=32.97 Aligned_cols=30 Identities=10% Similarity=-0.011 Sum_probs=21.1
Q ss_pred hHHHHHhhhccceeecccccccccCCCCCCeeEEEE
Q 000669 10 LTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLL 45 (1362)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~ 45 (1362)
-+||-.++.. || ....+|+.|.||.|.|-+
T Consensus 25 ~tLL~a~~~~-Gi-----~i~~~C~~G~Cg~C~v~v 54 (99)
T CHL00134 25 VYILDAAEEQ-GI-----DLPYSCRAGACSTCAGKV 54 (99)
T ss_pred CcHHHHHHHc-CC-----CCCcCCCCccCCCCEEEE
Confidence 3555555432 33 345699999999999988
No 108
>cd06220 DHOD_e_trans_like2 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.
Probab=24.24 E-value=35 Score=38.30 Aligned_cols=16 Identities=6% Similarity=0.077 Sum_probs=14.2
Q ss_pred ccccCCCCCCeeEEEE
Q 000669 30 SSVVAKVVAAACVVLL 45 (1362)
Q Consensus 30 k~gC~~G~CGaCtV~~ 45 (1362)
...|+.|.||+|.|-.
T Consensus 200 f~~cg~g~C~~C~v~~ 215 (233)
T cd06220 200 YMKCGIGICGSCCIDP 215 (233)
T ss_pred cccCcCCCcCccEecc
Confidence 3689999999999977
No 109
>COG0633 Fdx Ferredoxin [Energy production and conversion]
Probab=23.86 E-value=45 Score=32.68 Aligned_cols=31 Identities=19% Similarity=0.074 Sum_probs=21.5
Q ss_pred hHHHHHhhhccceeecccccccccCCCCCCeeEEEEc
Q 000669 10 LTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLS 46 (1362)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~gtk~gC~~G~CGaCtV~~~ 46 (1362)
-+||-.+... ||. .-..|+.|.||.|.|.|.
T Consensus 23 ~tiLe~a~~~-gi~-----i~~~C~~g~C~TC~v~v~ 53 (102)
T COG0633 23 ETLLEAAERN-GIP-----IEYACRGGACGTCRVKVL 53 (102)
T ss_pred cHHHHHHHHC-CCc-----ceecCCCCccCccEEEEe
Confidence 4555555443 222 248999999999999994
No 110
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=23.75 E-value=1.3e+02 Score=34.67 Aligned_cols=74 Identities=12% Similarity=0.064 Sum_probs=51.4
Q ss_pred cccccC-CceEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEeccc
Q 000669 216 WMLLDV-KGSWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGAT 294 (1362)
Q Consensus 216 ~~~~~~-~~~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~ 294 (1362)
++.+.+ .--|+.|.+.+ + . -...++.+|+-+.+-... ...+| + ..+++.|+.+++.|+.||+
T Consensus 12 t~~iGG~A~~~~~~~~~~-l----~-------~p~~vlG~GSNlLv~D~g--~~~vv-~--~~~~~~~~~~~~~v~~~AG 74 (257)
T PRK13904 12 SVKIGPPLEVLVLEEIDD-F----S-------QDGQIIGGANNLLISPNP--KNLAI-L--GKNFDYIKIDGECLEIGGA 74 (257)
T ss_pred ceeECceEEEEEEechhh-h----C-------CCeEEEeceeEEEEecCC--ccEEE-E--ccCcCeEEEeCCEEEEEcC
Confidence 455666 34466687776 4 2 358899999988764332 34555 2 2346777777789999999
Q ss_pred ccHHHHHHHHHH
Q 000669 295 VTISKAIESLKE 306 (1362)
Q Consensus 295 vTl~~l~~~~~~ 306 (1362)
+.+.++......
T Consensus 75 ~~l~~l~~~~~~ 86 (257)
T PRK13904 75 TKSGKIFNYAKK 86 (257)
T ss_pred CcHHHHHHHHHH
Confidence 999999887554
No 111
>PLN03136 Ferredoxin; Provisional
Probab=23.65 E-value=45 Score=35.05 Aligned_cols=16 Identities=6% Similarity=0.063 Sum_probs=14.6
Q ss_pred ccccCCCCCCeeEEEE
Q 000669 30 SSVVAKVVAAACVVLL 45 (1362)
Q Consensus 30 k~gC~~G~CGaCtV~~ 45 (1362)
..+|+.|.||.|.+-+
T Consensus 88 p~sCr~G~CGtC~~~l 103 (148)
T PLN03136 88 PYSCRAGSCSSCAGKV 103 (148)
T ss_pred CcCCCCccCCCCEEEE
Confidence 4689999999999988
No 112
>cd06219 DHOD_e_trans_like1 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group, as in flavoenzymes, or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD,
Probab=23.50 E-value=60 Score=36.87 Aligned_cols=26 Identities=19% Similarity=0.206 Sum_probs=19.8
Q ss_pred cceeecccc-cccccCCCCCCeeEEEE
Q 000669 20 CVITLALRV-SSSVVAKVVAAACVVLL 45 (1362)
Q Consensus 20 ~~~~~~l~g-tk~gC~~G~CGaCtV~~ 45 (1362)
.|+..-+.- ..-+|+.|.||+|+|..
T Consensus 202 ~Gv~~~~s~e~~m~Cg~G~C~~C~~~~ 228 (248)
T cd06219 202 YGIPTVVSLNPIMVDGTGMCGACRVTV 228 (248)
T ss_pred cCCCEEEEecccccCccceeeeEEEEe
Confidence 455444444 68899999999999975
No 113
>PRK05802 hypothetical protein; Provisional
Probab=23.47 E-value=38 Score=40.22 Aligned_cols=17 Identities=18% Similarity=0.343 Sum_probs=15.4
Q ss_pred cccccCCCCCCeeEEEE
Q 000669 29 SSSVVAKVVAAACVVLL 45 (1362)
Q Consensus 29 tk~gC~~G~CGaCtV~~ 45 (1362)
++-.||.|.||+|+|-.
T Consensus 288 ~~M~CG~G~Cg~C~v~~ 304 (320)
T PRK05802 288 AKMCCGEGICGACTVRY 304 (320)
T ss_pred CeeeCcCccCCeeEEEE
Confidence 47899999999999986
No 114
>PRK08166 NADH dehydrogenase subunit G; Validated
Probab=21.85 E-value=47 Score=44.91 Aligned_cols=89 Identities=22% Similarity=0.277 Sum_probs=56.1
Q ss_pred chHHHHHhhhccceeecccccccccC------CCCCCeeEEEEcccCCCCCccCceeccchHHhhHhcCCCEEEEecCCC
Q 000669 9 TLTLLLLCLSSCVITLALRVSSSVVA------KVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLG 82 (1362)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~gtk~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~ 82 (1362)
.-|||.-++ +.||.+ -..|. .|.|+.|.|.|..-. . +.....+.||.+|+. +|+.|.|-.---
T Consensus 16 g~til~a~~-~~gi~i-----p~~C~~~~~~~~G~C~~C~v~v~~g~-~--~~~~~~~~aC~~~v~--~gm~v~t~~~~~ 84 (847)
T PRK08166 16 ADNLLEACL-SLGIDI-----PYFCWHPALGSVGACRQCAVKQYQNP-E--DTRGRLVMSCMTPAT--DGTFISIDDPEA 84 (847)
T ss_pred CCHHHHHHH-HcCCCC-----CccccCCCCCCCCccCCCeEEEeecC-c--cCCCCcccCcCCCCC--CCCEEEeCCHHH
Confidence 345555544 344442 34786 599999999993210 0 113457899998876 599999832110
Q ss_pred CCCCCccHHHHHHHHhcCCCCCCCCchH
Q 000669 83 NSKAGFHPIHQRFAGFHASQCGFCTPGM 110 (1362)
Q Consensus 83 ~~~~~~h~iq~a~~~~~~~qCG~CtpG~ 110 (1362)
...=.-+.+.+..+|-..|..|.-|-
T Consensus 85 --~~~r~~~~e~ll~~hp~dc~~c~~~g 110 (847)
T PRK08166 85 --KAFRASVVEWLMTNHPHDCPVCEEGG 110 (847)
T ss_pred --HHHHHHHHHHHHhcCCCCCCccCCCC
Confidence 11113466778889999999998653
No 115
>KOG4730 consensus D-arabinono-1, 4-lactone oxidase [Defense mechanisms]
Probab=21.75 E-value=1.4e+02 Score=36.68 Aligned_cols=80 Identities=18% Similarity=0.228 Sum_probs=52.3
Q ss_pred eEEecCCHHHHHHHHHcccCCCCCCeEEEecCcccccccccCCCCeeEeCCCCCCCcceeecCCeEEecccccHHHHHHH
Q 000669 224 SWHNPISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIES 303 (1362)
Q Consensus 224 ~~~~P~sl~eal~ll~~~~~~~~~~a~lvaGgT~l~v~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~ 303 (1362)
.+-.|+|++|+.++.+.... ++...|.|. .++-+-+.......+|+++.+.--..+.-+.-.+++=|++|+.||.+.
T Consensus 52 nv~yP~teaeL~~lVa~A~~-a~~kirvVg--~gHSp~~l~ctdg~lisl~~lnkVv~~dpe~~tvTV~aGirlrQLie~ 128 (518)
T KOG4730|consen 52 NVNYPKTEAELVELVAAATE-AGKKIRVVG--SGHSPSKLVCTDGLLISLDKLNKVVEFDPELKTVTVQAGIRLRQLIEE 128 (518)
T ss_pred ccCCCCCHHHHHHHHHHHHH-cCceEEEec--ccCCCCcceeccccEEEhhhhccceeeCchhceEEeccCcCHHHHHHH
Confidence 34459999999999885311 244566665 333332222233488998887643344444568899999999999987
Q ss_pred HHH
Q 000669 304 LKE 306 (1362)
Q Consensus 304 ~~~ 306 (1362)
+..
T Consensus 129 ~~~ 131 (518)
T KOG4730|consen 129 LAK 131 (518)
T ss_pred HHh
Confidence 665
Done!