Query 000669
Match_columns 1362
No_of_seqs 382 out of 3980
Neff 6.9
Searched_HMMs 29240
Date Tue Mar 26 16:55:15 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000669.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_441-444//hhsearch_pdb/000669hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyv_A AOH1; oxidoreductase, m 1.0 1 1 2492.5 107.4 1244 6-1352 24-1317(1335)
2 3unc_A Xanthine dehydrogenase/ 1.0 1 1 2412.8 120.3 1245 6-1353 20-1316(1332)
3 1vlb_A Aldehyde oxidoreductase 1.0 1 1 1587.9 87.1 849 7-1347 18-906 (907)
4 1dgj_A Aldehyde oxidoreductase 1.0 1 1 1579.4 86.8 849 7-1347 18-906 (907)
5 3nvz_C Xanthine dehydrogenase/ 1.0 1 1 1396.8 79.5 721 584-1353 1-746 (755)
6 2w3s_B Xanthine dehydrogenase; 1.0 1 1 1365.7 77.5 716 585-1347 2-771 (777)
7 1ffv_B CUTL, molybdoprotein of 1.0 1 1 1344.0 71.9 723 582-1350 14-800 (803)
8 1n62_B Carbon monoxide dehydro 1.0 1 1 1337.9 71.8 719 584-1348 19-804 (809)
9 1rm6_A 4-hydroxybenzoyl-COA re 1.0 1 1 1336.2 76.6 707 581-1348 6-764 (769)
10 1t3q_B Quinoline 2-oxidoreduct 1.0 1 1 1328.5 72.6 710 585-1349 13-785 (788)
No 1
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=1.00 E-value=1 Score=2492.49 Aligned_cols=1244 Identities=30% Similarity=0.504 Sum_probs=1124.9
Q ss_pred CCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf 67724777874310232642533534658889880099972358997765760022227766710898799705888888
Q 000669 6 RSQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSK 85 (1362)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~gtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~~i~TvEg~~~~~ 85 (1362)
-+|+.|||.|||+. ++|||||+||+||+||||||+|+++|+.++++.+++|||||+|++++||++|+|||||++.+
T Consensus 24 ~~p~~tLl~~LR~~----~~ltGTK~gC~EG~CGACtV~v~~~~~~~~~~~~~avNsCl~~l~~~~g~~v~TvEglg~~~ 99 (1335)
T 3zyv_A 24 ADPEVNLLFYLRKV----IRLTGTKYGCGGGDCGACTVMISRYDPISKRISHFSATACLVPICSLHGAAVTTVEGIGSTK 99 (1335)
T ss_dssp CCTTCBHHHHHHHT----TCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECHHHHCCTT
T ss_pred CCCCCCHHHHHHCC----CCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 99674499997346----89961554457878816599975485799918998760989999982598898228988899
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 98658989998724998999970399989999971000599999998998999999999318944589984489999997
Q 000669 86 AGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSF 165 (1362)
Q Consensus 86 ~~~h~iq~~~~~~~~~qCG~Ctpg~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~ 165 (1362)
++||||||+|+++|||||||||||||||||+||+++ +.| ++++|+++|+||||||||||||+||+|+|
T Consensus 100 ~~lHpvQ~~~a~~hgsQCGFCTPGfVMSmyall~~~-----~~p-------t~~~ie~al~GNLCRCTGYRPIldA~ksf 167 (1335)
T 3zyv_A 100 TRIHPVQERIAKGHGTQCGFCTPGMVMSIYTLLRNH-----PEP-------STEQIMETLGGNLCRCTGYRPIVESAKSF 167 (1335)
T ss_dssp SCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHHC-----SSC-------CHHHHHHHHTTCCCSSSCSHHHHHHHHTT
T ss_pred CCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC-----CCC-------CHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 998999999984499848989729999999999769-----997-------99999998587641348888999999986
Q ss_pred HHCCCCCCCC-CCCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCHHHCCC----CCCCCCCC-CCEEEEC
Q ss_conf 5014532247-8764488988-----------8778999998899998776880000124----55301257-7159912
Q 000669 166 AADVDIEDLG-FNSFWGKGES-----------KEVKPSRLPPCKRNGDIFTFPQFRKKEN----KSWMLLDV-KGSWHNP 228 (1362)
Q Consensus 166 ~~~~d~~~l~-~~~c~~~~~~-----------~~~~~~~~~~~~~~~~~~~fp~~l~~~~----~~~~~~~~-~~~~~~P 228 (1362)
+.+.++|+.. .++||.+... ..+...++.+++|+++. ||||+|.... ...+.+.+ +.+||+|
T Consensus 168 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~-ifppel~~~~~~~~~~~l~~~g~~~~w~~P 246 (1335)
T 3zyv_A 168 CPSSTCCQMNGEGKCCLDEEKNEPERKNSVCTKLYEKKEFQPLDPTQEL-IFPPELMRMAEESQNTVLTFRGERTTWIAP 246 (1335)
T ss_dssp CC-----------------------------CCSSCGGGSCCCCGGGSC-CCCHHHHHHHC--CCCCEEEECSSCEEEEC
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHCCCCCEEEECCCCCEEECC
T ss_conf 0457631136887533353336731124321000241115777863354-689889863312456515655897469657
Q ss_pred CCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC--CCCCCEEEECCCCCCCCCEEECCCEEEECCCCCHHHHHHHHHH
Q ss_conf 99999999987156788997189915756412336--6789926708999887662645990896434649999999898
Q 000669 229 ISVQELQNLLESHEDNNQTSIKLVVGNTGMGYYKE--VEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESLKE 306 (1362)
Q Consensus 229 ~sl~eal~ll~~~~~~~~~~a~lvaGgT~lgi~k~--~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~ 306 (1362)
.||+|+++++.+ +|+++||+|||++|++.. ...++++|++++|+||+.|+.++++|+|||+|||+++++.+..
T Consensus 247 ~tl~el~~l~~~-----~p~a~lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~~~l~~ 321 (1335)
T 3zyv_A 247 GTLNDLLELKMK-----HPSAPLVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVKNVLSD 321 (1335)
T ss_dssp SSHHHHHHHHHH-----CTTSCBCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHHHHHHH
T ss_pred CCHHHHHHHHHH-----CCCCEEEEECCCCEEEEEECCCCCCEEEECCCCHHHHEEEECCCEEEECCCCCHHHHHHHHHH
T ss_conf 979999999987-----899869985661105683047888869875856657038866997998426869999999999
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEECCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEEEHHHHH-C
Q ss_conf 421010012123999999999641520414412478300045778998489999980989999948920899655441-2
Q 000669 307 ETKEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFL-E 385 (1362)
Q Consensus 307 ~~~~~~~~~~~~~~~L~~~l~~iAs~qIRN~ATiGGNI~~a~p~~~psDl~~~LlAldA~v~i~~~~g~r~i~l~dF~-~ 385 (1362)
.+++++.+++++|+.|.+++++|||+||||+||||||||++||+ ||++|+|+|++|+|+|.+.+|.|+++++||| .
T Consensus 322 ~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~asPi---sD~~p~L~A~~A~l~l~~~~g~r~i~l~d~F~~ 398 (1335)
T 3zyv_A 322 VVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISRLPT---SDLNPILGIGNCILNVASTEGIQQIPLNDHFLA 398 (1335)
T ss_dssp HHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTCCTT---CSSHHHHGGGTCEEEEECSSCEEEEECCTTTSC
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEECCCCC---CHHHHHHHHHCCEEEEECCCCEEEEECHHHHHH
T ss_conf 98644402114479999999985516424764336734205774---057789986287899962896189840686521
Q ss_pred ---CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEE
Q ss_conf ---99999784699999139999998766656210001242135999984013477899987068789996023239998
Q 000669 386 ---RPPLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAF 462 (1362)
Q Consensus 386 ---~~~l~~~eiI~~I~iP~~~~~~~~~~~~~~~~~~~~yK~~~R~~~~dia~Vn~a~~~~~~~~~~~~~~~i~~~ria~ 462 (1362)
+++|.++|||++|+||++.. +.+|++||+++| +++|||+||+||++.++++ +++|+++||+|
T Consensus 399 gyrk~~l~~~eil~si~iP~~~~----------~~~~~~yK~s~R-~d~dia~Vnaa~~v~l~~~----~~~v~~~~iaf 463 (1335)
T 3zyv_A 399 GVPDAILKPEQVLISVFVPRSSK----------WEFVSAFRQAPR-QQNAFATVNAGMKVVFKED----TNTITDLGILY 463 (1335)
T ss_dssp C----CCCTTCEEEEEEEECCCT----------TEEEEEEEECSS-SSSSCCSEEEEEEEEC--------CBCSEEEEEE
T ss_pred CCCCCCCCCCCEEEEEECCCCCH----------HHHHHHEEECCC-CCCCHHHHEEEEEEEEECC----CCEEEEEEEEE
T ss_conf 34201358870899863057843----------434441022464-4443143101226898448----98286999998
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 34698873418999999809999999999999998233654579-9-998999999999999999996633101344556
Q 000669 463 GAFGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVVAEVG-T-PNPAYRSSLAVGFLFEFFSSLTETNVEISRSSL 540 (1362)
Q Consensus 463 Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~ei~p~~~-~-~s~~YR~~la~~l~~k~l~~~~~~~~~~~~~~~ 540 (1362)
|||+++ |+|+.++|++|+||.|+++++++|++.|.+|+.|..+ . +|++||+.|+.+||||||+++.++++...+.
T Consensus 464 GGma~~-~~rA~~te~~L~Gk~~~~~~l~~A~~~L~~e~~p~~~~~g~~~~YR~~la~~ll~kf~l~~~~~~~~~~~~-- 540 (1335)
T 3zyv_A 464 GGIGAT-VISADKSCRQLIGRCWDEEMLDDAGKMICEEVSLLMAAPGGMEEYRKTLAISFLFMFYLDVLKQLKTRDPH-- 540 (1335)
T ss_dssp ESSSSS-CC---CTTGGGTTCBC---CHHHHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred ECCCCC-CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--
T ss_conf 447675-40689999986589887899999999987325987678874299999999999999999988763235666--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf 8999887765532212223332344786578665322258----788788986555542031232321233578899957
Q 000669 541 CGYGNDFSLKDSKVQQYYDLSDKNKVPTLLSSAKQVVQLS----REYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCL 616 (1362)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL 616 (1362)
.. ..++.. ..+.....++++|.+.|.|++. +.+++||||++|+|+..||||+++|++|++.+||||
T Consensus 541 -~~--------~~~~~~-~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~IGk~v~R~d~~~kvtG~a~Y~~Di~~~pgmL 610 (1335)
T 3zyv_A 541 -KY--------PDISQK-LLHILEDFPLTMPYGMQSFQDVDFQQPLQDPIGRPIMHQSGIKHATGEAVFCDDMSVLPGEL 610 (1335)
T ss_dssp -------------CCHH-HHGGGCCCCCC---CCEECCCCCTTSCTTCCTTSCCCCTTHHHHHHTCCCCSTTSCCCTTCE
T ss_pred -CC--------CCCCHH-HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCE
T ss_conf -67--------775554-42422246777777631343466668777889999768574887778314515578899989
Q ss_pred EEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCHHHHH
Q ss_conf 99997648889198101475587999859999728989998775655678995445677201139838999968999999
Q 000669 617 YGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNAN 696 (1362)
Q Consensus 617 ~a~~vrSp~~~a~I~sID~s~A~~~pGVv~vit~~Dip~~g~n~~~~~~~~~~~~~a~~~V~y~GqpVa~VVA~t~~~A~ 696 (1362)
|+++||||++||+|++||+++|+++|||++|+|++|+| +.|. ..++|+|++++|+|+|||||+|||+|+++|+
T Consensus 611 ~a~~vrSp~aharI~sID~s~A~~~pGV~aV~T~~DiP--~~~~-----~~~~~~la~d~Vr~~Gq~VA~VvAet~~~A~ 683 (1335)
T 3zyv_A 611 FLAVVTSSKSHAKIISLDASEALASLGVVDVVTARDVP--GDNG-----REEESLYAQDEVICVGQIVCAVAADSYAHAQ 683 (1335)
T ss_dssp EEEEEECSSSSEEEEEEECHHHHHSTTEEEEECGGGCS--SCCC-------CCCSSCCSEECSTTCEEEEEEESSHHHHH
T ss_pred EEEEEECCCCCEEEEEEEHHHHHCCCCEEEEEEHHHCC--CCCC-----CCCCCCCCCCEEEECCCEEEEEEECCHHHHH
T ss_conf 99999679898699997757875389839999631167--7678-----8876567788589869979999979999999
Q ss_pred HHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEE
Q ss_conf 86154728980367899767999898427975459984444458633331014611578899957504789799908999
Q 000669 697 RAANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAV 776 (1362)
Q Consensus 697 ~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~a~A~ 776 (1362)
+|+++|+|+| |+++|++.++++|++.+++.... .....||++++|++++++ +|++|++++|+|+||||++++|+
T Consensus 684 ~Aa~~V~VeY--e~l~P~v~~~~~a~~~~~~~~~~---~~~~~Gd~~~af~~a~~v-ve~~y~~~~~~h~~mEp~~~~a~ 757 (1335)
T 3zyv_A 684 QAAKKVKIVY--QDIEPMIVTVQDALQYESFIGPE---RKLEQGNVEEAFQCADQI-LEGEVHLGGQEHFYMETQSVRVV 757 (1335)
T ss_dssp HHHTTCEEEE--EECSCCCCSHHHHHHTTCCEEEE---EEEEESCHHHHTTSSSEE-EEEEEEECCBCCCCSSCCEEEEE
T ss_pred HHHCCCEEEE--EECCCCCCCHHHHHHCCCCCCCC---CCCCCCCHHHHHHHCCEE-EEEEEEECCEECCCCCCCCEEEE
T ss_conf 9852784899--82787648899975245565862---136678877887318849-99999987550245688436999
Q ss_pred EC-CCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89-99819999299884899999998829999629999744798889866764201100134532215999999999856
Q 000669 777 PD-EDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKL 855 (1362)
Q Consensus 777 ~~-~dg~l~V~~stQ~p~~vq~~iA~~Lgip~~kV~V~~~~vGGgFGgK~~~~~~~~~~~~~~~~~~~~a~~aAlaA~~~ 855 (1362)
|+ +||+|+||+|||+|+.+|..+|++||||++||||+++++|||||+|.+.+.+ +++.||++|+++
T Consensus 758 ~~~edg~l~v~~sTQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGGFG~K~~~~~~-------------~~~~aAlaA~~~ 824 (1335)
T 3zyv_A 758 PKGEDKEMDIYVSSQDAAFTQEMVARTLGIPKNRINCHVKRVGGAFGGKASKPGL-------------LASVAAVAAQKT 824 (1335)
T ss_dssp ECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEESCCSCCTTTTSSHHHH-------------HHHHHHHHHHHH
T ss_pred EECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHH-------------HHHHHHHHHHHH
T ss_conf 9889995999989869899999999987879766999858854789866567669-------------999999999976
Q ss_pred CCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCC-HHHHHHHCCCCCCCCCCEEEEEE
Q ss_conf 99899991777888641999957999999658899599999999833897999875-15677411688876782799999
Q 000669 856 CRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIK 934 (1362)
Q Consensus 856 gRPVkl~~sRee~~~~~~~R~~~~~~~k~~~~~dG~i~a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~ 934 (1362)
||||||+|||+|+|.++++||++..+||+|+|+||+|+|++++++.|+|+|.+++. +......+..++|++||++++++
T Consensus 825 gRPVK~~~tR~E~~~~~~~R~~~~~~~~~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~ 904 (1335)
T 3zyv_A 825 GRPIRFILERRDDMLITGGRHPLLGKYKIGFMNNGKIKAADIQLYINGGCTPDDSELVIEYALLKLENAYKIPNLRVRGR 904 (1335)
T ss_dssp CSCEEEECCHHHHHHHSCCBCCEEEEEEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHHTTTTBCCSEEEEEEE
T ss_pred CCCEEEEECHHHHHHHCCCCCCHHEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEE
T ss_conf 89889998779998446898711037788765899756233222205665666541034446550367502348999899
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHH
Q ss_conf 9645999766558988368898999999999999399999999961788887654334788975557-989999999970
Q 000669 935 VCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVS 1013 (1362)
Q Consensus 935 ~v~Tn~~~~~a~Rg~G~~q~~fa~E~~idelA~~lg~DP~e~R~~Nl~~~g~~~~~~~~~~g~~~~~-~~~~~l~~~~~~ 1013 (1362)
.|+||++|++||||||.||++|++|++||++|++|||||+|||++|++++++.. +.|+.++. .+.+||+++.+.
T Consensus 905 ~v~TN~~~~~a~RG~G~pq~~fa~E~~mD~lA~~lg~DP~elR~~N~~~~~~~~-----~~g~~~~~~~~~~~l~~~~~~ 979 (1335)
T 3zyv_A 905 VCKTNLPSNTAFRGFGFPQGAFVTETCMSAVAAKCRLPPEKVRELNMYRTIDRT-----IHNQEFDPTNLLQCWEACVEN 979 (1335)
T ss_dssp EECCSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHBCCSSCBC-----TTSCBC--CCHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCHHHEEEECCHHHHHHHHHCCCHHHHHHHHCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHH
T ss_conf 985157887755689705624676041467797747899999998346787666-----578655566389999998876
Q ss_pred CCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCC-----CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 792467999999862399850122453157505568-----874899994799599995775568775599999999871
Q 000669 1014 SSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVK-----SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFAL 1088 (1362)
Q Consensus 1014 ~~~~~r~~~~~~~n~~~~~~krGia~a~~~~~~~~~-----~~~a~v~i~~DGsv~v~~g~~e~GqG~~T~~~qiaA~~L 1088 (1362)
++|.+|+++..+||..++|+|||+++++..++.+++ ++.+.|+|++||+|+|.+|++|||||++|+++||||++|
T Consensus 980 ~~~~~~~~~~~~~~~~~~~~~rGi~~~~~~~~~g~~~~~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~T~~aQiaAe~L 1059 (1335)
T 3zyv_A 980 SSYYNRKKAVDEFNQQRFWKKRGIAIIPMKFSVGFPKTFYYQAAALVQIYTDGSVLVAHGGVELGQGINTKMIQVASREL 1059 (1335)
T ss_dssp TTHHHHHHHHHHHHHHCSSSEEEEEEEEEEEECCCSSGGGGCEEEEEEECTTSCEEECBSCCCSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 66888887655430147611062179898741257865566502899994798689997873789862689999999996
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 98878988999994799819988766887782333100039999999999999999999886520497799999999851
Q 000669 1089 SSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQAHL 1168 (1362)
Q Consensus 1089 gi~~~~~~~~p~~~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~l~~~~~~~~w~~~~~~a~~ 1168 (1362)
|| |+++|+|..+||+.+|++++|+|||+++++|.||++||++|++||+++++.. ...+|++++..++.
T Consensus 1060 Gi--------p~e~I~v~~~DT~~~P~~~gt~gSr~t~~~G~Av~~Aa~~l~~rl~~~a~~~----~~~~~~~~~~~~~~ 1127 (1335)
T 3zyv_A 1060 KI--------PMSYIHLDEMSTVTVPNTVTTGASTGADVNGRAVQNACQILMKRLEPIIKQN----PSGTWEEWVKEAFV 1127 (1335)
T ss_dssp TS--------CGGGEEECCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHTTTHHHHS----TTSCHHHHHHHHHH
T ss_pred CC--------CHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCHHHHHHHHHH
T ss_conf 99--------8787899637867789999974037889999999999999999999998657----79988999877543
Q ss_pred CCCEEEEEEEECCC----------CCCCCCEEEEEE---EEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCHHHHH
Q ss_conf 48315898975389----------998751006999---99995479699999999991698779120211202045866
Q 000669 1169 QSVNLSASSLYVPD----------STSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQG 1235 (1362)
Q Consensus 1169 ~~~~l~a~~~~~~~----------~~~~~~~~~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~G 1235 (1362)
..+.|++.++|.+. +.+++|++|||+ ||||++||+++|+|+++++|||++|||.+++||||||++||
T Consensus 1128 ~~v~l~a~~~~~~~~~~~~~~~g~g~~~~~~~~ga~~aEVeVD~~TG~v~V~r~~~v~D~G~vINP~~~~gQieGG~vqG 1207 (1335)
T 3zyv_A 1128 QSISLSATGYFRGYQADMDWEKGEGDIFPYFVFGAACSEVEIDCLTGAHKNIRTDIVMDGSFSINPAVDIGQIEGAFVQG 1207 (1335)
T ss_dssp TTCCCEEEEEECCCCCEEETTTTEEECCSCEEEEEEEEEEEECTTTCCEEEEEEEEEECCSSCSCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 33112677774267687674457688676676069999999977999289999999996591249999999999999999
Q ss_pred HHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 78986014312799853358999998999898897208999317999888888775589995413339999999999998
Q 000669 1236 IGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREAR 1315 (1362)
Q Consensus 1236 lG~aL~Ee~~~d~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~p~g~~gsKg~GE~~~~~~~av~~Ai~nAi~~A~ 1315 (1362)
||++|+||+.||++|+++|+||++|++|++.|+|++|+|+++++.++|.+|||+||+||+|++++++|++||+|||++|+
T Consensus 1208 iG~AL~Ee~~~d~~G~~~t~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~~p~GaKGvGE~g~~~~~~v~~AI~nAv~~A~ 1287 (1335)
T 3zyv_A 1208 LGLYTLEELKYSPEGVLYTRGPHQYKIASVTDIPEEFHVSLLTPTPNPKAIYSSKGLGEAGTFLGCSVFFAIAAAVAAAR 1287 (1335)
T ss_dssp HHHHHTCCCCBCTTCCBCCCSTTTSCCCCTTTSCSEEEEEECCCCCCTTSGGGCCCCTTGGGGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEECCCCCCCCCCHHHCCCCCHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99998489799989848779934372867466798319999568999999887758325432355517999999999999
Q ss_pred HHCCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCHHH
Q ss_conf 7101136788886402147999968999970899078
Q 000669 1316 KQLLTWSDLDRSDITFNLEVPATMPVVKELCGLDSVE 1352 (1362)
Q Consensus 1316 ~~~~~~~~~~g~~~~~~~~~P~tpe~I~~a~~~~~~~ 1352 (1362)
+++ |.+++|.+++|+||||||+||.....+
T Consensus 1288 ~~~-------g~~g~~~~~~P~TperV~~A~~d~~~~ 1317 (1335)
T 3zyv_A 1288 EER-------GLSPIWAINSPATAEVIRMACEDQFTN 1317 (1335)
T ss_dssp HHC------------CCCCSSCCHHHHHHHSCCTTTS
T ss_pred HHC-------CCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 862-------899870068999999999986546532
No 2
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=1.00 E-value=1 Score=2412.82 Aligned_cols=1245 Identities=33% Similarity=0.542 Sum_probs=1120.0
Q ss_pred CCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf 67724777874310232642533534658889880099972358997765760022227766710898799705888888
Q 000669 6 RSQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSVNGCSITTSEGLGNSK 85 (1362)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~gtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~~i~TvEg~~~~~ 85 (1362)
-.|+.+||.+||+.. +|||||+||++|+||||||+++++|+.++++++++|||||+|+++++|++|+|||||++.+
T Consensus 20 ~~p~~~ll~~LR~~~----~ltgtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TiEgl~~~~ 95 (1332)
T 3unc_A 20 ADPETTLLAYLRRKL----GLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGIGSTK 95 (1332)
T ss_dssp CCTTCBHHHHHHHTS----CCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECGGGTCCTT
T ss_pred CCCCCCHHHHHHHHC----CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 899889999986425----9997677748999888689990146655553884840577569980897899956556778
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 98658989998724998999970399989999971000599999998998999999999318944589984489999997
Q 000669 86 AGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIAGNLCRCTGYRPIADACKSF 165 (1362)
Q Consensus 86 ~~~h~iq~~~~~~~~~qCG~Ctpg~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~ 165 (1362)
+.|||||++|+++|++|||||||||||++|+||+++ +.| |+++|+++|+|||||||||++|++|++.+
T Consensus 96 ~~~hpvq~a~~~~~~~QCG~CtpG~vms~~~ll~~~-----~~p-------~~~~i~~~l~gnlCRCtgy~~i~~a~~~~ 163 (1332)
T 3unc_A 96 TRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRNQ-----PEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTF 163 (1332)
T ss_dssp SCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHHC-----SSC-------CHHHHHHTTTTCCCSSSCSHHHHHHHGGG
T ss_pred CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC-----CCC-------CHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 876899999998099979987417999999999846-----998-------99999999717840677864499999987
Q ss_pred HHCCCCCC---CCCCCCCCCCC-C-------CCCCCCCCCCCCCCCCCCCCCCHHHC---CCCCCCCCCC-CCEEEECCC
Q ss_conf 50145322---47876448898-8-------87789999988999987768800001---2455301257-715991299
Q 000669 166 AADVDIED---LGFNSFWGKGE-S-------KEVKPSRLPPCKRNGDIFTFPQFRKK---ENKSWMLLDV-KGSWHNPIS 230 (1362)
Q Consensus 166 ~~~~d~~~---l~~~~c~~~~~-~-------~~~~~~~~~~~~~~~~~~~fp~~l~~---~~~~~~~~~~-~~~~~~P~s 230 (1362)
+.+.++|. .+ ..||+++. . ..+..+++++|||+++. ||||+|+. ....++.+.+ +++||+|.|
T Consensus 164 ~~~~~~c~~~~~g-~~cc~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~-ifpp~L~~~~~~~~~~l~~~~~~~~~~~P~s 241 (1332)
T 3unc_A 164 AKNGGCCGGNGNN-PNCCMNQKKDHTVTLSPSLFNPEEFMPLDPTQEP-IFPPELLRLKDVPPKQLRFEGERVTWIQAST 241 (1332)
T ss_dssp C-----------------------------CCSCCGGGSCCCCGGGSC-CCCHHHHHHTTSCCCCEEEECSSCEEEECCS
T ss_pred HHCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHCCCCCCCEEECCCCEEEECCCC
T ss_conf 5427755555567-7543565445555555221462225778864133-5797786300266773676389618990498
Q ss_pred HHHHHHHHHCCCCCCCCCEEEEECCCCCCC-CCCC-CCCCEEEECCCCCCCCCEEECCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 999999987156788997189915756412-3366-78992670899988766264599089643464999999989842
Q 000669 231 VQELQNLLESHEDNNQTSIKLVVGNTGMGY-YKEV-EHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESLKEET 308 (1362)
Q Consensus 231 l~eal~ll~~~~~~~~~~a~lvaGgT~lgi-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~ 308 (1362)
|+||++++++ ++++++|+|||++++ ++.+ ..++++|||++|+||+.|+.++++|+|||+||+++|++++...+
T Consensus 242 l~ea~~ll~~-----~~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~~l~~~l~~~~ 316 (1332)
T 3unc_A 242 LKELLDLKAQ-----HPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKTLLEAV 316 (1332)
T ss_dssp HHHHHHHHHH-----CTTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----CCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCHHHCCEEEECCEEEEEECCHHHHHHHHHHHHH
T ss_conf 9999999864-----89988999272778886347788886997688777674697099999971390999999999986
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEECCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEEEHHH-HHC--
Q ss_conf 10100121239999999996415204144124783000457789984899999809899999489208996554-412--
Q 000669 309 KEVHFECVQVFRKIAEHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEE-FLE-- 385 (1362)
Q Consensus 309 ~~~~~~~~~~~~~L~~~l~~iAs~qIRN~ATiGGNI~~a~p~~~psDl~~~LlAldA~v~i~~~~g~r~i~l~d-F~~-- 385 (1362)
.+++.+.++.+|.|.+++++|||+||||+|||||||++++|+ ||++|+|+||||+|+|.+.+|.|++|++| ||.
T Consensus 317 ~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asp~---sD~~~~LlAl~A~v~l~~~~G~R~ipl~d~Ff~g~ 393 (1332)
T 3unc_A 317 AKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSY 393 (1332)
T ss_dssp HHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCCTT---CSSHHHHHHTTCEEEEEETTEEEEEECCGGGCCST
T ss_pred HHCCCCCCCHHHHHHHHHHHHCCHHHHCEEECCCEECCCCCC---HHHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHCC
T ss_conf 432521113068999999874788883143544400225885---16899999839899999489748987478564364
Q ss_pred -CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECC
Q ss_conf -9999978469999913999999876665621000124213599998401347789998706878999602323999834
Q 000669 386 -RPPLDCRSVLLSIEIPYWDPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFGA 464 (1362)
Q Consensus 386 -~~~l~~~eiI~~I~iP~~~~~~~~~~~~~~~~~~~~yK~~~R~~~~dia~Vn~a~~~~~~~~~~~~~~~i~~~ria~Gg 464 (1362)
++.|.++|||++|+||.+.. ..++.+||+++| +++|||+||+||.++++++ +++|+++||+|||
T Consensus 394 ~~t~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~d~A~V~~A~~v~~~~~----~~~i~~~rIa~Gg 458 (1332)
T 3unc_A 394 RKTLLGPEEILLSIEIPYSRE----------DEFFSAFKQASR-REDDIAKVTCGMRVLFQPG----SMQVKELALCYGG 458 (1332)
T ss_dssp TCCSCCTTCEEEEEEEECCCT----------TEEEEEEEECSS-SSSCCCSEEEEEEEEESTT----SSBEEEEEEEEES
T ss_pred CCCCCCCCCEEEEEEECCCCC----------CCCEEEEEEECC-CCCCCCEEEEEEEEEECCC----CCEEEEEEEEEEC
T ss_conf 654589985899999047887----------761589998227-8898534899999998178----9859789999978
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 69887341899999980999999999999999823365-4579-999899999999999999999663310134455689
Q 000669 465 FGTKHAIRARRVEEFLTGKLLSFDVLYEAIILLRDTVV-AEVG-TPNPAYRSSLAVGFLFEFFSSLTETNVEISRSSLCG 542 (1362)
Q Consensus 465 v~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~ei~-p~~~-~~s~~YR~~la~~l~~k~l~~~~~~~~~~~~~~~~~ 542 (1362)
|+++ |+|++++|++|.||.|+++++++|++.+.+++. |.++ .+|++||++|+.+||+|||+++.++++. .+.. +
T Consensus 459 va~~-p~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~~~~~d~~gs~eYR~~La~~ll~r~l~~v~~~~~~-~~~~--~ 534 (1332)
T 3unc_A 459 MADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKLGK-DSKD--K 534 (1332)
T ss_dssp SSSS-CEECHHHHHTTTTCBSSHHHHHHHHHHHHHHTCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred CCCC-CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCC--C
T ss_conf 9774-2329999999638988689999999999846789855566799999999999999999999765245-6544--5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf 998877655322122233323447865786653222----5878878898655554203123232123357889995799
Q 000669 543 YGNDFSLKDSKVQQYYDLSDKNKVPTLLSSAKQVVQ----LSREYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYG 618 (1362)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a 618 (1362)
. ++ ++.. ..++....++++|++.|.|+ +.+++++||++++|+|+..||||+++|++|++.+|||||+
T Consensus 535 ~---~~-----~~~~-~~s~~~~~~~~~~~g~q~~~~~~~~~~~~~~iG~~v~R~d~~~kvtG~a~Y~~Di~~~pgmL~a 605 (1332)
T 3unc_A 535 C---GK-----LDPT-YTSATLLFQKDPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFL 605 (1332)
T ss_dssp -----------CCTT-TGGGGCCCCCCCCEEEEECCCCCTTCCTTCCTTSCCCCTTHHHHHHTCSCCGGGSCCBTTCEEE
T ss_pred C---CC-----CCHH-HCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEE
T ss_conf 6---77-----8844-3455311467887740564235666655686899875835587666333112556799996899
Q ss_pred EEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHH
Q ss_conf 99764888919810147558799985999972898999877-56556789954456772011398389999689999998
Q 000669 619 AFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGEN-IGCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANR 697 (1362)
Q Consensus 619 ~~vrSp~~~a~I~sID~s~A~~~pGVv~vit~~Dip~~g~n-~~~~~~~~~~~~~a~~~V~y~GqpVa~VVA~t~~~A~~ 697 (1362)
++||||++||+|++||+++|+++|||++|+|++|+| +.| ++ ...++|+|++++|||+|||||+|||+|+|+|++
T Consensus 606 ~~vrSp~aha~I~sID~s~A~~~pGV~~V~t~~Dip--~~~~~g---~~~d~~~la~~~Vry~GqpVa~VvA~t~~~A~~ 680 (1332)
T 3unc_A 606 RLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIP--GSNETG---LFNDETVFAKDTVTCVGHIIGAVVADTPEHAER 680 (1332)
T ss_dssp EEEECSSSSEEEEEEECTTGGGSTTEEEEECGGGCS--SCSEES---TTSCEESSCCSEECSTTCEEEEEEESSHHHHHH
T ss_pred EEEECCCCCEEEEEECHHHHHCCCCEEEEEECCCCC--CCCCCC---CCCCCCCCCCCEEEECCCEEEEEEECCHHHHHH
T ss_conf 999679888067420428985699879999610268--766678---888752346865887698499999899999999
Q ss_pred HCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEE
Q ss_conf 61547289803678997679998984279754599844444586333310146115788999575047897999089998
Q 000669 698 AANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVP 777 (1362)
Q Consensus 698 Aa~~V~V~y~~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~a~A~~ 777 (1362)
|+++|+|+| |++ |+++++++|+++++++... .....||++++|++|+++ +|++|++++|+|+||||++++|+|
T Consensus 681 Aa~~v~Vey--e~l-p~v~~~~~A~~~~~~~~~~---~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~H~~mEp~~~~A~~ 753 (1332)
T 3unc_A 681 AAHVVKVTY--EDL-PAIITIEDAIKNNSFYGSE---LKIEKGDLKKGFSEADNV-VSGELYIGGQDHFYLETHCTIAIP 753 (1332)
T ss_dssp HHHTCEEEE--EEC-CCCCSHHHHHHTTCEEEEE---EEEEESCHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEE
T ss_pred HHHCCCEEE--ECC-CCCCCHHHHHHCCCCCCCC---CCCCCCCHHHHHHCCCEE-EEEEEEECCCCCCCCCCCEEEEEE
T ss_conf 961575378--768-8768999996256766876---431148876776318867-633698177255578885389999
Q ss_pred C-CCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9-998199992998848999999988299996299997447988898667642011001345322159999999998569
Q 000669 778 D-EDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLC 856 (1362)
Q Consensus 778 ~-~dg~l~V~~stQ~p~~vq~~iA~~Lgip~~kV~V~~~~vGGgFGgK~~~~~~~~~~~~~~~~~~~~a~~aAlaA~~~g 856 (1362)
+ ++|+|+||+|||+|+.+|..+|++||||++||||+++++|||||+|...... +++.||++|+++|
T Consensus 754 ~~~~g~l~v~~sTQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~-------------~~~~aAlaA~~~g 820 (1332)
T 3unc_A 754 KGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTL-------------VSVAVALAAYKTG 820 (1332)
T ss_dssp CSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTTTSSTTHH-------------HHHHHHHHHHHHS
T ss_pred ECCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCCCH-------------HHHHHHHHHHHHC
T ss_conf 679996999989978899999999986898056799968877899988766654-------------9999999999829
Q ss_pred CCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCC-HHHHHHHCCCCCCCCCCEEEEEEE
Q ss_conf 9899991777888641999957999999658899599999999833897999875-156774116888767827999999
Q 000669 857 RPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKV 935 (1362)
Q Consensus 857 RPVkl~~sRee~~~~~~~R~~~~~~~k~~~~~dG~i~a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~ 935 (1362)
|||||+|||+|+|.++++||++.++||+++|+||+|+|++++++.|+|+|.+++. ++.+.+.++.++|++||++++++.
T Consensus 821 RPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~ 900 (1332)
T 3unc_A 821 HPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRL 900 (1332)
T ss_dssp SCEEEECCHHHHHHHSCCBCCEEEEEEEEECTTSCEEEEEEEEEEEEESSCTTHHHHHHHHHHTTTTTBCCSSEEEEEEE
T ss_pred CCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEE
T ss_conf 99899953799875358988144899999999996999999999837857663178999999745887268738999999
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHC
Q ss_conf 645999766558988368898999999999999399999999961788887654334788975557-9899999999707
Q 000669 936 CRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVSS 1014 (1362)
Q Consensus 936 v~Tn~~~~~a~Rg~G~~q~~fa~E~~idelA~~lg~DP~e~R~~Nl~~~g~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~ 1014 (1362)
|+||+++++||||||.||++|++|++|||+|+++||||+|||++|++++++.+ ++|+.+++ .+++||+++++.+
T Consensus 901 v~TN~~~~~a~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~g~~t-----~~g~~~~~~~l~~~l~~~~~~~ 975 (1332)
T 3unc_A 901 CKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLT-----HFNQRLEGFSVPRCWDECLKSS 975 (1332)
T ss_dssp EECSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCBC-----TTCCBCCSCCHHHHHHHHHHHT
T ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHC
T ss_conf 96899988853689808889999999999999979099999998368888868-----8886237889999999998751
Q ss_pred CCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCC-----CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 92467999999862399850122453157505568-----8748999947995999957755687755999999998719
Q 000669 1015 SFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVK-----SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALS 1089 (1362)
Q Consensus 1015 ~~~~r~~~~~~~n~~~~~~krGia~a~~~~~~~~~-----~~~a~v~i~~DGsv~v~~g~~e~GqG~~T~~~qiaA~~Lg 1089 (1362)
+|++|+++++.||++++|+|||+|+++.+|+++++ ++.+.|+|++||||+|.+|++|||||++|+++||||++||
T Consensus 976 ~~~~r~~~~~~~~~~~~~~~rGig~~~~~~g~g~~~~~~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~LG 1055 (1332)
T 3unc_A 976 QYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALK 1055 (1332)
T ss_dssp THHHHHHHHHHHHHHCSSEEEEEEEEEEEEEESCSSGGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHC
T ss_conf 88888888987531488633357898787636236777886038999927981999989967788878999999999969
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
Q ss_conf 88789889999947998199887668877823331000399999999999999999998865204977999999998514
Q 000669 1090 SVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQAHLQ 1169 (1362)
Q Consensus 1090 i~~~~~~~~p~~~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~l~~~~~~~~w~~~~~~a~~~ 1169 (1362)
| |+|+|+|..+||+.+||+++|+|||+|+++|.||++||++|++||.++++.. ...+|++++..++..
T Consensus 1056 i--------p~e~V~v~~~DT~~~P~~~~t~aSr~t~~~G~Av~~A~~~l~~rl~~~aa~~----~~~~~~~~~~~a~~~ 1123 (1332)
T 3unc_A 1056 I--------PISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKKN----PDGSWEDWVMAAYQD 1123 (1332)
T ss_dssp S--------CGGGEECCCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC----TTSCHHHHHHHHHHT
T ss_pred C--------CHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCHHHHHHHHHCC
T ss_conf 9--------8778899817888889999861777899999999999999999999998638----899899999886314
Q ss_pred CCEEEEEEEECCC----------CCCCCCEEEEEE---EEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCHHHHHH
Q ss_conf 8315898975389----------998751006999---999954796999999999916987791202112020458667
Q 000669 1170 SVNLSASSLYVPD----------STSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGI 1236 (1362)
Q Consensus 1170 ~~~l~a~~~~~~~----------~~~~~~~~~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~Gl 1236 (1362)
.+.|.++++|.++ +.++.|++||++ ||||++||+++|+|+++++|||++|||.+++|||||||+|||
T Consensus 1124 ~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~Ga~~aEVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~GQieGG~~qGi 1203 (1332)
T 3unc_A 1124 RVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGL 1203 (1332)
T ss_dssp TCCCEEEEEEECCSCCCBTTTTBSCSCSEEEEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 77548999981687665655677887765635789999999779996899899999857855799999889971299999
Q ss_pred HHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-
Q ss_conf 8986014312799853358999998999898897208999317999888888775589995413339999999999998-
Q 000669 1237 GFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREAR- 1315 (1362)
Q Consensus 1237 G~aL~Ee~~~d~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~p~g~~gsKg~GE~~~~~~~av~~Ai~nAi~~A~- 1315 (1362)
|++|+||+.||++|+++|++|++|+||++.|+|++|+|++++..++|.+|||+||+||+|++++++|++||+|||++|+
T Consensus 1204 G~aL~Ee~~~d~~G~l~t~~~~dY~iP~~~DiP~~~~v~~~~~~~~p~~p~GaKGvGE~~~~~~~av~~AI~nAv~~A~~ 1283 (1332)
T 3unc_A 1204 GLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARA 1283 (1332)
T ss_dssp HHHHTCCCCBCTTSCBCCCSTTTSCCCCGGGSCSEEEEEECSSCCCTTSGGGBCCCSSTTGGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEECCCCCCCCCCHHHCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 89983865699999898899787679662206983799996278998898876435775333206789999999999864
Q ss_pred --HHCCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCHHHH
Q ss_conf --71011367888864021479999689999708990789
Q 000669 1316 --KQLLTWSDLDRSDITFNLEVPATMPVVKELCGLDSVER 1353 (1362)
Q Consensus 1316 --~~~~~~~~~~g~~~~~~~~~P~tpe~I~~a~~~~~~~~ 1353 (1362)
.+. |..+++.+++|+|||+|+++|...+.++
T Consensus 1284 ~~~~~-------g~~g~~~~~~P~Tpe~v~~a~~~~~~~~ 1316 (1332)
T 3unc_A 1284 QHTNN-------NTKELFRLDSPATPEKIRNACVDKFTTL 1316 (1332)
T ss_dssp HHTCC-------CTTCCCCCCBSCCHHHHHHHSCCHHHHH
T ss_pred HCCCC-------CCCCCEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 10013-------6778451489999999999875678741
No 3
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=1.00 E-value=1 Score=1587.95 Aligned_cols=849 Identities=24% Similarity=0.310 Sum_probs=745.5
Q ss_pred CCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCHHHHHHHC-CCCEEEEECCCCCCC
Q ss_conf 7724777874310232642533534658889880099972358997765760022227766710-898799705888888
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSV-NGCSITTSEGLGNSK 85 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g~~i~TvEg~~~~~ 85 (1362)
.|..+||-+||+. |+|||||.||++|.||||||++ |+++||||++|+.++ +|++|+|||||++ .
T Consensus 18 ~~~~~ll~~Lr~~----~~l~g~k~gC~~g~CGaCtv~v----------dg~~~~sC~~~~~~~~~g~~i~Tiegl~~-~ 82 (907)
T 1vlb_A 18 DAEALLSDVLRQQ----LGLTGVKVGCEQGQCGACSVIL----------DGKVVRACVTKMKRVADGAQITTIEGVGQ-P 82 (907)
T ss_dssp CTTSBHHHHHHHT----TCCTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGSCTTCEEECHHHHCB-T
T ss_pred CCCCHHHHHHHHH----CCCCEECCCCCCCCCCCCEEEE----------CCEEEECHHHHHHHHCCCCCEEEECCCCC-C
T ss_conf 9999099999873----0897514787998728568999----------99286506768999769980899878998-7
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH--CCCCCCCCCHHHHHHHH
Q ss_conf 9865898999872499899997039998999997100059999999899899999999931--89445899844899999
Q 000669 86 AGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIA--GNLCRCTGYRPIADACK 163 (1362)
Q Consensus 86 ~~~h~iq~~~~~~~~~qCG~Ctpg~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~--gnlCRCtgy~~i~~a~~ 163 (1362)
+.|||||++|+++|++|||||||||||++++||++ ++.| |++||+++|+ |||||||||++|++|++
T Consensus 83 ~~~~~~q~a~~~~~~~qCG~c~pg~~~~~~~ll~~-----~~~p-------~~~~i~~~~~~~gn~cRctgY~~i~~a~~ 150 (907)
T 1vlb_A 83 ENLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLDT-----NADP-------SREDVRDWFQKHRNACRCTGYKPLVDAVM 150 (907)
T ss_dssp TBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHTT-----CSSC-------CHHHHHHHHHHTTCCCSSSCSHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC-----CCCC-------CHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 67689999999829988876737999999999974-----9999-------99999999986289866336699999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCC
Q ss_conf 97501453224787644889888778999998899998776880000124553012577159912999999999871567
Q 000669 164 SFAADVDIEDLGFNSFWGKGESKEVKPSRLPPCKRNGDIFTFPQFRKKENKSWMLLDVKGSWHNPISVQELQNLLESHED 243 (1362)
Q Consensus 164 ~~~~~~d~~~l~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~fp~~l~~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~ 243 (1362)
.++. +++
T Consensus 151 ~aa~---------------------------------------------------------------------~~~---- 157 (907)
T 1vlb_A 151 DAAA---------------------------------------------------------------------VIN---- 157 (907)
T ss_dssp HHHH---------------------------------------------------------------------HHT----
T ss_pred HHHH---------------------------------------------------------------------HHC----
T ss_conf 9987---------------------------------------------------------------------522----
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 88997189915756412336678992670899988766264599089643464999999989842101001212399999
Q 000669 244 NNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIA 323 (1362)
Q Consensus 244 ~~~~~a~lvaGgT~lgi~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~ 323 (1362)
.+.
T Consensus 158 --~~~--------------------------------------------------------------------------- 160 (907)
T 1vlb_A 158 --GKK--------------------------------------------------------------------------- 160 (907)
T ss_dssp --TSS---------------------------------------------------------------------------
T ss_pred --CCC---------------------------------------------------------------------------
T ss_conf --688---------------------------------------------------------------------------
Q ss_pred HHHHHHHCCCHHCCCCCCCCEECCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEEEHHHHHCCCCCCCCCEEEEEEECCC
Q ss_conf 99996415204144124783000457789984899999809899999489208996554412999997846999991399
Q 000669 324 EHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFLERPPLDCRSVLLSIEIPYW 403 (1362)
Q Consensus 324 ~~l~~iAs~qIRN~ATiGGNI~~a~p~~~psDl~~~LlAldA~v~i~~~~g~r~i~l~dF~~~~~l~~~eiI~~I~iP~~ 403 (1362)
T Consensus 161 -------------------------------------------------------------------------------- 160 (907)
T 1vlb_A 161 -------------------------------------------------------------------------------- 160 (907)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCC
Q ss_conf 99998766656210001242135999984013477899987068789996023239998346988734189999998099
Q 000669 404 DPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFGAFGTKHAIRARRVEEFLTGK 483 (1362)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~yK~~~R~~~~dia~Vn~a~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk 483 (1362)
++ .. +.
T Consensus 161 ~~----------~~-~~--------------------------------------------------------------- 166 (907)
T 1vlb_A 161 PE----------TD-LE--------------------------------------------------------------- 166 (907)
T ss_dssp CG----------GG-GS---------------------------------------------------------------
T ss_pred CC----------CC-CC---------------------------------------------------------------
T ss_conf 60----------00-13---------------------------------------------------------------
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999998233654579999899999999999999999663310134455689998877655322122233323
Q 000669 484 LLSFDVLYEAIILLRDTVVAEVGTPNPAYRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDSKVQQYYDLSDK 563 (1362)
Q Consensus 484 ~~~~~~l~~a~~~l~~ei~p~~~~~s~~YR~~la~~l~~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (1362)
++. |
T Consensus 167 ------------------------------------------------~k~--p-------------------------- 170 (907)
T 1vlb_A 167 ------------------------------------------------FKM--P-------------------------- 170 (907)
T ss_dssp ------------------------------------------------CCC--C--------------------------
T ss_pred ------------------------------------------------CCC--C--------------------------
T ss_conf ------------------------------------------------467--4--------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC---CCCCCCEEEEEEECCCCCEEEEECCCCCCCC
Q ss_conf 4478657866532225878878898655554203123232123357---8899957999976488891981014755879
Q 000669 564 NKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDDI---PSPTNCLYGAFIYSTKPLARIKSIEFKSNSI 640 (1362)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di---~~~~gmL~a~~vrSp~~~a~I~sID~s~A~~ 640 (1362)
.++++||++++|+|+..|+||+++|++|+ . +|||||+++||||++||+|++||+++|++
T Consensus 171 -----------------~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~-~~gmL~a~~vrSp~aharI~sID~s~A~~ 232 (907)
T 1vlb_A 171 -----------------ADGRIWGSKYPRPTAVAKVTGTLDYGADLGLKM-PAGTLHLAMVQAKVSHANIKGIDTSEALT 232 (907)
T ss_dssp -----------------SSCCCTTSCCCCTTHHHHHTTCSCCHHHHHHTS-CTTCEEEEEEECSSSSEEEEEEECHHHHT
T ss_pred -----------------CCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCC-CCCCEEEEEEECCCCCEEEEEECHHHHHC
T ss_conf -----------------324637876755563544278454211457677-99982999993699983999932068763
Q ss_pred CCCEEEEEECCCCCCCCCCCCCC------CCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 99859999728989998775655------678995445677201139838999968999999861547289803678997
Q 000669 641 PCGVIALLTFKDIPEGGENIGCK------SMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPP 714 (1362)
Q Consensus 641 ~pGVv~vit~~Dip~~g~n~~~~------~~~~~~~~~a~~~V~y~GqpVa~VVA~t~~~A~~Aa~~V~V~y~~e~l~p~ 714 (1362)
+|||++|+|++|+|......+.. ....++|+|++++|+|+|||||+|||+|+++|++|+++|+|+| |++ |+
T Consensus 233 ~pGV~~V~t~~D~p~~~~~~g~~~~~~~~~~~~~~~~la~~~Vr~~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~ 309 (907)
T 1vlb_A 233 MPGVHSVITHKDVKGKNRITGLITFPTNKGDGWDRPILCDEKVFQYGDCIALVCADSEANARAAAEKVKVDL--EEL-PA 309 (907)
T ss_dssp STTEEEEECGGGCCSCSEECCSSCCTTCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CC
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEECCCEEEEEEECCHHHHHHHHCCEEEEE--ECC-CC
T ss_conf 898399997502765334567543344455677750004776887698399999899999999843548999--759-98
Q ss_pred CCCHHHHHHCCCC--CCCCCCC---CCCCCCCHHHHH-HCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEC
Q ss_conf 6799989842797--5459984---444458633331-014611578899957504789799908999899981999929
Q 000669 715 ILSVEEAVEQSSL--FEIFPHW---YPKQVGDITKGM-DEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSS 788 (1362)
Q Consensus 715 v~~~~~Al~~~a~--~~~~~~~---~~~~~Gd~~~a~-~~a~~vvve~~y~~~~q~H~~mEp~~a~A~~~~dg~l~V~~s 788 (1362)
++++++|++++++ |+..+|+ .....||++++| ++++++ +|++|++++|+|+||||++++|+|++||+|+||+|
T Consensus 310 v~~~~~Al~~~a~~i~~~~~n~~~~~~~~~Gd~~~af~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~s 388 (907)
T 1vlb_A 310 YMSGPAAAAEDAIEIHPGTPNVYFEQPIVKGEDTGPIFASADVT-VEGDFYVGRQPHMPIEPDVAFAYMGDDGKCYIHSK 388 (907)
T ss_dssp CCSHHHHHSTTCCCSSTTSCSEEEEEEEEESSCHHHHHHHCSEE-EEEEEEECCCCCCCSSCCEEEEEECTTSCEEEEES
T ss_pred CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEE-EEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEC
T ss_conf 89999997316730155545623200124687555513569869-99999989844347878749999868996899979
Q ss_pred CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHH
Q ss_conf 98848999999988299996299997447988898667642011001345322159999999998569989999177788
Q 000669 789 TQCPENVHATISRCLGIPQHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTD 868 (1362)
Q Consensus 789 tQ~p~~vq~~iA~~Lgip~~kV~V~~~~vGGgFGgK~~~~~~~~~~~~~~~~~~~~a~~aAlaA~~~gRPVkl~~sRee~ 868 (1362)
||+|+.+|..+|++||||++||||+++++|||||+|.... .++.+|++|+++||||||+|||+|+
T Consensus 389 tQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~---------------~~~~aA~~A~~~grPVkl~~tR~e~ 453 (907)
T 1vlb_A 389 SIGVHLHLYMIAPGVGLEPDQLVLVANPMGGTFGYKFSPT---------------SEALVAVAAMATGRPVHLRYNYQQQ 453 (907)
T ss_dssp CSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTGGGSCS---------------SHHHHHHHHHHHSSCEEEECCHHHH
T ss_pred CCCHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCC---------------HHHHHHHHHHHHCCCEEEEECHHHH
T ss_conf 8676899999999868891368999676788899976644---------------8999999999749999999426998
Q ss_pred HHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCC-HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCC
Q ss_conf 8641999957999999658899599999999833897999875-156774116888767827999999645999766558
Q 000669 869 MIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMR 947 (1362)
Q Consensus 869 ~~~~~~R~~~~~~~k~~~~~dG~i~a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~~a~R 947 (1362)
|..+++||++.+++|+++|+||+|+|++++++.|+|+|.+++. ++.+...++.++|++||++++++.|+||++|++|||
T Consensus 454 ~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~R 533 (907)
T 1vlb_A 454 QQYTGKRSPWEMNVKFAAKKDGTLLAMESDWLVDHGPYSEFGDLLTLRGAQFIGAGYNIPNIRGLGRTVATNHVWGSAFR 533 (907)
T ss_dssp HHSSCBCCCEEEEEEEEECTTCCEEEEEEEEEEECTTCCTTHHHHHHHHHHHTTTTBCCCEEEEEEEEECCSSCCBCCCT
T ss_pred HHCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 52168988568999999999998999999999768756554348899987334888587858999999737999876557
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 988368898999999999999399999999961788887654334788975557-9899999999707924679999998
Q 000669 948 APGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFNQRTEMIKEF 1026 (1362)
Q Consensus 948 g~G~~q~~fa~E~~idelA~~lg~DP~e~R~~Nl~~~g~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~ 1026 (1362)
|||.+|++|++|++|||+|++|||||+|||++|++++++.+ +.|+.+++ ++++||+++++. |.+|+++.+.|
T Consensus 534 g~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~-----~~g~~~~~~~~~~~l~~~~~~--w~~r~~~~~~~ 606 (907)
T 1vlb_A 534 GYGAPQSMFASECLMDMLAEKLGMDPLELRYKNAYRPGDTN-----PTGQEPEVFSLPDMIDQLRPK--YQAALEKAQKE 606 (907)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCCC-----TTSCCCSCCCHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHH--HHHHHHHHHHC
T ss_conf 88748889999999999999959399999998558988768-----887413686699999999999--98766655302
Q ss_pred HHCCCCCEEEEEEEEEEEECCCC---CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHH---CCCCCCCCCCCC
Q ss_conf 62399850122453157505568---874899994799599995775568775599999999871---988789889999
Q 000669 1027 NRSNLWQKRGICRVPIVHEMFVK---SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFAL---SSVQGGELGDLL 1100 (1362)
Q Consensus 1027 n~~~~~~krGia~a~~~~~~~~~---~~~a~v~i~~DGsv~v~~g~~e~GqG~~T~~~qiaA~~L---gi~~~~~~~~p~ 1100 (1362)
..++| +||+|+++.+|+++++ .+.+.|+|++||+|+|.+|++|||||++|+++||||++| || |+
T Consensus 607 -~~g~~-~rGiGiA~~~~~~g~~~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gi--------p~ 676 (907)
T 1vlb_A 607 -STATH-KKGVGISIGVYGSGLDGPDASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGV--------AP 676 (907)
T ss_dssp -CCSSE-EEEEEEEEEEEESSSTTTCEEEEEEEECTTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTC--------CG
T ss_pred -CCCCC-EEEEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC--------CH
T ss_conf -57885-067999998762466888874179999279849999898167877889999999999856599--------87
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEEC
Q ss_conf 94799819988766887782333100039999999999999999999886520497799999999851483158989753
Q 000669 1101 DKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQAHLQSVNLSASSLYV 1180 (1362)
Q Consensus 1101 ~~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~l~~~~~~~~w~~~~~~a~~~~~~l~a~~~~~ 1180 (1362)
|+|+|..+||+.+|++++|+|||+|+++|+||++||++|++||.++++. .++|.+++..++ .+...+.|.
T Consensus 677 ~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~Av~~Aa~~l~~~l~~~aa~------~l~~~el~~~~~----~~~~~~~~~ 746 (907)
T 1vlb_A 677 EKIKFTWPNTATTPNSGPSGGSRQQVMTGNAIRVACENLLKACEKPGGG------YYTYDELKAADK----PTKITGNWT 746 (907)
T ss_dssp GGEEECCCBTTTSCCCCCSCTTCHHHHHHHHHHHHHHHHHHHHBCTTSS------BCCHHHHHHTTC----CCEEEEEEE
T ss_pred HHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCHHHHHHHCC----CCCCCCEEC
T ss_conf 7889966788878999987303488999999999999999999987640------599999996301----222341223
Q ss_pred CCC-----------CCCCCEEEEEE---EEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHCCCEE
Q ss_conf 899-----------98751006999---9999547969999999999169877912021120204586678986014312
Q 000669 1181 PDS-----------TSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPT 1246 (1362)
Q Consensus 1181 ~~~-----------~~~~~~~~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~aL~Ee~~~ 1246 (1362)
.+. .++.+++|+|+ ||||++||+++|+|+++++|||++|||.+++||||||++||||++|+||+.
T Consensus 747 ~~~~~~~~~~~~~~~p~~~~~~ga~~aEVeVD~~TG~v~V~r~~~v~D~G~viNP~~~~gQieGG~~qGlG~aL~Ee~~- 825 (907)
T 1vlb_A 747 ASGATHCDAVTGLGKPFVVYMYGVFMAEVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDFE- 825 (907)
T ss_dssp CTTCBCCCTTTCCSBCCSCEEEEEEEEEEEEETTTCCEEEEEEEEEEECSSCSCHHHHHHHHHHHHHHHHHHHHTCCCC-
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf 7874444455677887787641899999999789993999999999978866798999999999999999999877754-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 79985335899999899989889720899931799988888877558999541333999999999999871011367888
Q 000669 1247 NSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDR 1326 (1362)
Q Consensus 1247 d~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~p~g~~gsKg~GE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g 1326 (1362)
|+++|+||++|++|++.|+|++|+|++++++ +|.+|||+||+||+++++ +++||+|||++|+|
T Consensus 826 ---G~~~~~~~~dY~ip~~~D~P~~i~v~~ve~~-~~~~p~GaKGvGE~~~~~---~~~AIaNAv~~A~G---------- 888 (907)
T 1vlb_A 826 ---DIKKHATLVGAGFPFIKQIPDKLDIVYVNHP-RPDGPFGASGVGELPLTS---PHAAIINAIKSATG---------- 888 (907)
T ss_dssp ---STTTSSSTTTTTCCCGGGSCSCEEEEECCCC-CTTSGGGCCCCTTGGGSS---HHHHHHHHHHHHHS----------
T ss_pred ---CEECCCCHHHCCCCCHHHCCCCEEEEEECCC-CCCCCCCCCCCCCCCCCH---HHHHHHHHHHHHHC----------
T ss_conf ---8567799242749875768983899972689-998987670556632113---89999999998559----------
Q ss_pred CCCEECCCCCCCHHHHHHHCC
Q ss_conf 864021479999689999708
Q 000669 1327 SDITFNLEVPATMPVVKELCG 1347 (1362)
Q Consensus 1327 ~~~~~~~~~P~tpe~I~~a~~ 1347 (1362)
.|++++|+|||+|++++.
T Consensus 889 ---~r~~~lP~tpe~v~~al~ 906 (907)
T 1vlb_A 889 ---VRIYRLPAYPEKVLEALK 906 (907)
T ss_dssp ---CCCCBSCCCHHHHHHHHH
T ss_pred ---CCCCCCCCCHHHHHHHHH
T ss_conf ---843548989999999844
No 4
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=1.00 E-value=1 Score=1579.38 Aligned_cols=849 Identities=24% Similarity=0.313 Sum_probs=742.4
Q ss_pred CCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCHHHHHHHC-CCCEEEEECCCCCCC
Q ss_conf 7724777874310232642533534658889880099972358997765760022227766710-898799705888888
Q 000669 7 SQTLTLLLLCLSSCVITLALRVSSSVVAKVVAAACVVLLSKYSPELDQVEDFTISSCLTLLCSV-NGCSITTSEGLGNSK 85 (1362)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~l~gtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g~~i~TvEg~~~~~ 85 (1362)
.|..+||-+||+. |+|||||+||++|.||||||++ |+++||||++|+.++ +|++|+|||||++ .
T Consensus 18 ~~~~~ll~~Lr~~----~~l~g~k~gC~~G~CGaCtv~v----------dg~~v~sC~~~~~~~~~g~~i~TiEgl~~-~ 82 (907)
T 1dgj_A 18 SPNDLLVDVLRSQ----LQLTSVKVGCGKGQCGACTVIL----------DGKVVRACIIKMSRVAENASVTTLEGIGA-P 82 (907)
T ss_dssp CTTCBHHHHHHHT----TCCTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGSCTTCEEECGGGTCB-T
T ss_pred CCCCCHHHHHHHH----CCCCCCCCCCCCCCCCCEEEEE----------CCEEEEHHHHHHHHHCCCCCEEEECCCCC-C
T ss_conf 9999499999874----5998647787998737519999----------99186015768999769981899778998-7
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH--CCCCCCCCCHHHHHHHH
Q ss_conf 9865898999872499899997039998999997100059999999899899999999931--89445899844899999
Q 000669 86 AGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVNAEKTNRPEPPAGFSKLTRSEAEKAIA--GNLCRCTGYRPIADACK 163 (1362)
Q Consensus 86 ~~~h~iq~~~~~~~~~qCG~Ctpg~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~--gnlCRCtgy~~i~~a~~ 163 (1362)
+.|||||++|+++|++|||||||||||++++||+++ +.| |+++|+++|+ |||||||||++|++|++
T Consensus 83 ~~~~~~q~a~~~~~~~qCG~c~pg~~~~~~~ll~~~-----~~p-------~~~~i~~~~~~~gnlcRctgY~~i~~a~~ 150 (907)
T 1dgj_A 83 DCLHPLQHAWIQHGAAQCGFCTPGFIVSAKALLDEN-----VAP-------SREDVRDWFQKHHNICRCTGYKPLVDAVM 150 (907)
T ss_dssp TBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHHHC-----SSC-------CHHHHHHHHHHTTCCCSSSCSHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC-----CCC-------CHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 666799999998099888868138999999998659-----999-------99999999975289866206799999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCC
Q ss_conf 97501453224787644889888778999998899998776880000124553012577159912999999999871567
Q 000669 164 SFAADVDIEDLGFNSFWGKGESKEVKPSRLPPCKRNGDIFTFPQFRKKENKSWMLLDVKGSWHNPISVQELQNLLESHED 243 (1362)
Q Consensus 164 ~~~~~~d~~~l~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~fp~~l~~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~ 243 (1362)
.++. +++
T Consensus 151 ~aa~---------------------------------------------------------------------~~~---- 157 (907)
T 1dgj_A 151 DAAA---------------------------------------------------------------------ILR---- 157 (907)
T ss_dssp HHHH---------------------------------------------------------------------HHT----
T ss_pred HHHH---------------------------------------------------------------------HHC----
T ss_conf 9987---------------------------------------------------------------------513----
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 88997189915756412336678992670899988766264599089643464999999989842101001212399999
Q 000669 244 NNQTSIKLVVGNTGMGYYKEVEHYDKYIDIRYIPELSMIRRDETGIEIGATVTISKAIESLKEETKEVHFECVQVFRKIA 323 (1362)
Q Consensus 244 ~~~~~a~lvaGgT~lgi~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~ 323 (1362)
.+.
T Consensus 158 --~~~--------------------------------------------------------------------------- 160 (907)
T 1dgj_A 158 --GEK--------------------------------------------------------------------------- 160 (907)
T ss_dssp --TSS---------------------------------------------------------------------------
T ss_pred --CCC---------------------------------------------------------------------------
T ss_conf --688---------------------------------------------------------------------------
Q ss_pred HHHHHHHCCCHHCCCCCCCCEECCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEEEHHHHHCCCCCCCCCEEEEEEECCC
Q ss_conf 99996415204144124783000457789984899999809899999489208996554412999997846999991399
Q 000669 324 EHMEKIASTFIRNSASVGGNLVMAQRKCFPSDIATILLAVGAKVNIMKGQKCEKFMLEEFLERPPLDCRSVLLSIEIPYW 403 (1362)
Q Consensus 324 ~~l~~iAs~qIRN~ATiGGNI~~a~p~~~psDl~~~LlAldA~v~i~~~~g~r~i~l~dF~~~~~l~~~eiI~~I~iP~~ 403 (1362)
T Consensus 161 -------------------------------------------------------------------------------- 160 (907)
T 1dgj_A 161 -------------------------------------------------------------------------------- 160 (907)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCC
Q ss_conf 99998766656210001242135999984013477899987068789996023239998346988734189999998099
Q 000669 404 DPSRNVTSETDNLLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKNGDRIMVNNCQLAFGAFGTKHAIRARRVEEFLTGK 483 (1362)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~yK~~~R~~~~dia~Vn~a~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk 483 (1362)
+. .. + .
T Consensus 161 ~~----------~~-~---~------------------------------------------------------------ 166 (907)
T 1dgj_A 161 TV----------EE-I---S------------------------------------------------------------ 166 (907)
T ss_dssp CH----------HH-H---S------------------------------------------------------------
T ss_pred CH----------HH-H---C------------------------------------------------------------
T ss_conf 82----------55-1---2------------------------------------------------------------
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999998233654579999899999999999999999663310134455689998877655322122233323
Q 000669 484 LLSFDVLYEAIILLRDTVVAEVGTPNPAYRSSLAVGFLFEFFSSLTETNVEISRSSLCGYGNDFSLKDSKVQQYYDLSDK 563 (1362)
Q Consensus 484 ~~~~~~l~~a~~~l~~ei~p~~~~~s~~YR~~la~~l~~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (1362)
++. |
T Consensus 167 ------------------------------------------------~k~--p-------------------------- 170 (907)
T 1dgj_A 167 ------------------------------------------------FKM--P-------------------------- 170 (907)
T ss_dssp ------------------------------------------------CCC--C--------------------------
T ss_pred ------------------------------------------------CCC--C--------------------------
T ss_conf ------------------------------------------------357--5--------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC--CCCCCCCEEEEEEECCCCCEEEEECCCCCCCCC
Q ss_conf 447865786653222587887889865555420312323212335--788999579999764888919810147558799
Q 000669 564 NKVPTLLSSAKQVVQLSREYYPVGGPITKSGAALQASGEAVYVDD--IPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIP 641 (1362)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~D--i~~~~gmL~a~~vrSp~~~a~I~sID~s~A~~~ 641 (1362)
.++++||++++|+|+..||||+++|++| ++.+|||||+++||||++||+|++||+++|+++
T Consensus 171 -----------------~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~~~gmL~a~~vrSp~aharI~sID~s~A~~~ 233 (907)
T 1dgj_A 171 -----------------ADGRIWGSSIPRPSAVAKVTGLAEFGADAALRMPENTLHLALAQAKVSHALIKGIDTSEAEKM 233 (907)
T ss_dssp -----------------TTCCCTTSCCCCTTHHHHHHTCCCBHHHHGGGSCTTCEEEEEEECSSSSEEEEEEECHHHHHS
T ss_pred -----------------CCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCEEEEEEECCCCCEEEEECCHHHHHCC
T ss_conf -----------------434636887878434552577357504867567999708999953879779996770798639
Q ss_pred CCEEEEEECCCCCCCCCCC-CCC------CCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 9859999728989998775-655------678995445677201139838999968999999861547289803678997
Q 000669 642 CGVIALLTFKDIPEGGENI-GCK------SMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPP 714 (1362)
Q Consensus 642 pGVv~vit~~Dip~~g~n~-~~~------~~~~~~~~~a~~~V~y~GqpVa~VVA~t~~~A~~Aa~~V~V~y~~e~l~p~ 714 (1362)
|||++|+|++|+|.. .+. +.. ....++|+|++++|+|+|||||+|||+|+++|++|+++|+|+| |++ |+
T Consensus 234 PGV~~V~t~~D~p~~-~~~~g~~~~~~~~~~~~~~~~la~~~Vry~Gq~VA~VvAet~~~A~~Aa~~v~Vey--e~l-p~ 309 (907)
T 1dgj_A 234 PGVYKVLTHKDVKGK-NRITGLITFPTNKGDGWERPILNDSKIFQYGDALAIVCADSEANARAAAEKVKFDL--ELL-PE 309 (907)
T ss_dssp TTEEEEECGGGCCSC-SEECCSSCCTTCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CC
T ss_pred CCCEEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHCCCEEEE--ECC-CC
T ss_conf 982899972027753-45567543344455678761025775887698599999899999999850657898--758-98
Q ss_pred CCCHHHHHHCCCC--CCCCCCC---CCCCCCCHHHHH--HCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEE
Q ss_conf 6799989842797--5459984---444458633331--01461157889995750478979990899989998199992
Q 000669 715 ILSVEEAVEQSSL--FEIFPHW---YPKQVGDITKGM--DEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYS 787 (1362)
Q Consensus 715 v~~~~~Al~~~a~--~~~~~~~---~~~~~Gd~~~a~--~~a~~vvve~~y~~~~q~H~~mEp~~a~A~~~~dg~l~V~~ 787 (1362)
++++++|++++++ |+..+|+ .....||++++| ++++++ +|++|++++|+|+||||++++|+|++||+|+||+
T Consensus 310 v~~~~~Al~~~a~~i~~~~~n~~~~~~~~~Gd~~~af~~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~ 388 (907)
T 1dgj_A 310 YMSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANVV-AEGSYYTQRQPHLPIEPDVGYGYINEQGQVVIHS 388 (907)
T ss_dssp CCSHHHHHSTTCCCSBTTBCSEEEEEEEEESSCSHHHHSCTTSEE-EEEEEEECCCCCCCSSCCEEEEEECTTSCEEEEE
T ss_pred CCCHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHCCCCCCEE-EEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEE
T ss_conf 899999974157301543246332001346874553024679879-9999998985444888975999983899589998
Q ss_pred CCCCHHHHHHHHHHHHCCC-CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHH
Q ss_conf 9988489999999882999-962999974479888986676420110013453221599999999985699899991777
Q 000669 788 STQCPENVHATISRCLGIP-QHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRK 866 (1362)
Q Consensus 788 stQ~p~~vq~~iA~~Lgip-~~kV~V~~~~vGGgFGgK~~~~~~~~~~~~~~~~~~~~a~~aAlaA~~~gRPVkl~~sRe 866 (1362)
|||+|+.+|..+|++|||| ++||||+++++|||||+|.... .++.+|++|+++||||||+|||+
T Consensus 389 stQ~p~~~r~~lA~~Lglp~~~~VrV~~~~vGGgFG~K~~~~---------------~~~~aA~~A~~~grPVkl~~tR~ 453 (907)
T 1dgj_A 389 KSVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPT---------------MEALVGVAVMATGRPCHLRYNYE 453 (907)
T ss_dssp CCSCHHHHHHHHHHHHTCCTTTTEEEEECBCSCCTTGGGSCS---------------SHHHHHHHHHHHCSCEEEECCHH
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCC---------------HHHHHHHHHHHHCCCEEEEEEHH
T ss_conf 986789999999998589997608999577788999886655---------------79999999997599989996059
Q ss_pred HHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCC-HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCC
Q ss_conf 888641999957999999658899599999999833897999875-1567741168887678279999996459997665
Q 000669 867 TDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSA 945 (1362)
Q Consensus 867 e~~~~~~~R~~~~~~~k~~~~~dG~i~a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~~a 945 (1362)
|+|..+++||++.+++|+++|+||+|+|++++++.|+|+|.+++. ++.+...++.++|++||++++++.|+||++|++|
T Consensus 454 e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga 533 (907)
T 1dgj_A 454 QQQNYTGKRSPFWTTMRYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAA 533 (907)
T ss_dssp HHHHSSCBCCCEEEEEEEEECTTSCEEEEEEEEEEECCSCCTTHHHHHHHHHHHTTTTBCCSEEEEEEEEECCSSCCBCC
T ss_pred HHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCC
T ss_conf 98620689883579999999999989999999997577555543489999987458886877399999997179998765
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 58988368898999999999999399999999961788887654334788975557-98999999997079246799999
Q 000669 946 MRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFNQRTEMIK 1024 (1362)
Q Consensus 946 ~Rg~G~~q~~fa~E~~idelA~~lg~DP~e~R~~Nl~~~g~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~ 1024 (1362)
|||||.+|++|++|++||++|++|||||+|||++|++++++.. +.|+.+++ ++++||+++++. |.+|+++.+
T Consensus 534 ~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~-----~~g~~~~s~~~~~~l~~~~~~--w~~r~~~~~ 606 (907)
T 1dgj_A 534 FRGYGAPESEFPSEVLMDELAEKLGMDPFELRALNCYREGDTT-----SSGQIPEVMSLPEMFDKMRPY--YEESKKRVK 606 (907)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCCC-----TTSCCCSCCCHHHHHHHHHHH--HHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHH--HHHHHHHHH
T ss_conf 5789778999999999999999859399999998558887768-----888403676299999999999--886555553
Q ss_pred HHHHCCCCCEEEEEEEEEEEECCCC---CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHH---CCCCCCCCCC
Q ss_conf 9862399850122453157505568---874899994799599995775568775599999999871---9887898899
Q 000669 1025 EFNRSNLWQKRGICRVPIVHEMFVK---SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFAL---SSVQGGELGD 1098 (1362)
Q Consensus 1025 ~~n~~~~~~krGia~a~~~~~~~~~---~~~a~v~i~~DGsv~v~~g~~e~GqG~~T~~~qiaA~~L---gi~~~~~~~~ 1098 (1362)
.| .+++| +||+|+++.+|+.+++ .+.+.|+|++||+|+|.+|++|||||++|+++||||++| ||
T Consensus 607 ~~-~~g~~-~rG~Gia~~~~~~g~~~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gi-------- 676 (907)
T 1dgj_A 607 ER-STAEI-KRGVGVALGVYGAGLDGPDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGI-------- 676 (907)
T ss_dssp TT-CCSSE-EEEEEEEEEEEEESSSSSCEEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHTGGGTC--------
T ss_pred CC-CCCCE-EEEEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC--------
T ss_conf 13-57870-289999998762467888874179999279839999898277866889999999999856699--------
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEE
Q ss_conf 99947998199887668877823331000399999999999999999998865204977999999998514831589897
Q 000669 1099 LLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLERMGSVNWETLIQQAHLQSVNLSASSL 1178 (1362)
Q Consensus 1099 p~~~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~l~~~~~~~~w~~~~~~a~~~~~~l~a~~~ 1178 (1362)
|+|+|+|..+||+.+|++++|+|||+|+++|+||++||++|++||.++++.+ ++|+++. .. +.-+.+.+.
T Consensus 677 p~~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~------l~~~~l~-~~---g~~~~~~~~ 746 (907)
T 1dgj_A 677 TPENIHLVMNDTSKTPNSGPAGGSRSQVVTGNAIRVACEMLIEGMRKPGGGF------FTPAEMK-AE---GRPMRYDGK 746 (907)
T ss_dssp CGGGEEEEESBTTTSCCCCCSCTTCTTTHHHHHHHHHHHHHHHHTBCSSSSB------CCHHHHH-HT---TCCCEEEEE
T ss_pred CHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCHHHHH-HC---CEEEEECCE
T ss_conf 8778899668888789999873024889999999999999999999976413------9989986-27---918971314
Q ss_pred ECCC-------C--CCCCCEEEEEE---EEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHCCCEE
Q ss_conf 5389-------9--98751006999---9999547969999999999169877912021120204586678986014312
Q 000669 1179 YVPD-------S--TSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPT 1246 (1362)
Q Consensus 1179 ~~~~-------~--~~~~~~~~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~aL~Ee~~~ 1246 (1362)
+... + .++.+++|+|+ ||||++||+++|+|+++++|||++|||.+++||||||++||||++|+||+.
T Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~ga~~aEVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~- 825 (907)
T 1dgj_A 747 WTAPAKDCDAKGQGSPFACYMYGLFLTEVAVEVATGKATVEKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDYE- 825 (907)
T ss_dssp EECSCBCCCTTSCSBCCSEEEEEEEEEEEEEETTTTEEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCC-
T ss_pred EECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf 5035777687777787788751899999999889995999999999979866798999999999999999999877753-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 79985335899999899989889720899931799988888877558999541333999999999999871011367888
Q 000669 1247 NSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDR 1326 (1362)
Q Consensus 1247 d~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~p~g~~gsKg~GE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g 1326 (1362)
|+++|+||++|++|++.|+|++|+|++++++ +|.+|||+||+||+++++ +++||+|||++|+|
T Consensus 826 ---G~~~~~~~~dY~ip~~~D~P~~i~v~~~e~~-~~~~p~GaKGvGE~~~~~---~~~AIaNAv~~A~G---------- 888 (907)
T 1dgj_A 826 ---DLKKHSTMGGAGIPSIKMIPDDIEIVYVETP-RKDGPFGASGVGEMPLTA---PHAAIINGIYNACG---------- 888 (907)
T ss_dssp ---STTTTSSTTTTTCCCGGGSCSCEEEEECCCC-CTTSGGGBCCCTTGGGSS---HHHHHHHHHHHHHS----------
T ss_pred ---CEECCCCHHHCCCCCHHHCCCCEEEEEECCC-CCCCCCCCCCCCCCCCCH---HHHHHHHHHHHHHC----------
T ss_conf ---8067799343769876878974899974689-998887775067632021---89999999998569----------
Q ss_pred CCCEECCCCCCCHHHHHHHCC
Q ss_conf 864021479999689999708
Q 000669 1327 SDITFNLEVPATMPVVKELCG 1347 (1362)
Q Consensus 1327 ~~~~~~~~~P~tpe~I~~a~~ 1347 (1362)
.|++++|+|||+|++++.
T Consensus 889 ---~r~~~lP~tpe~v~~al~ 906 (907)
T 1dgj_A 889 ---ARVRHLPARPEKVLEAMP 906 (907)
T ss_dssp ---CCCCBSCCCHHHHHHTCC
T ss_pred ---CCCCCCCCCHHHHHHHHH
T ss_conf ---853558989999999854
No 5
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=1.00 E-value=1 Score=1396.78 Aligned_cols=721 Identities=37% Similarity=0.616 Sum_probs=661.8
Q ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCC-CC
Q ss_conf 78898655554203123232123357889995799997648889198101475587999859999728989998775-65
Q 000669 584 YPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENI-GC 662 (1362)
Q Consensus 584 ~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~~~a~I~sID~s~A~~~pGVv~vit~~Dip~~g~n~-~~ 662 (1362)
++||++++|+|+..||||+++|++|++.+|||||++++|||++||+|++||+++|+++|||++|+|++|+| +.|. +
T Consensus 1 ~~iG~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~siD~s~A~~~pGV~~V~t~~d~p--~~~~~g- 77 (755)
T 3nvz_C 1 DTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIP--GSNETG- 77 (755)
T ss_dssp CCTTSCCCCTTHHHHHHTCSCCGGGSCCBTTCEEEEEEECSSSSEEEEEEECTTGGGSTTEEEEECGGGCS--SCSEES-
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHHCCCCEEEEEECCCCC--CCCCCC-
T ss_conf 99899874845587665455330226799996899999779898589876658974689839999867777--656678-
Q ss_pred CCCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCH
Q ss_conf 56789954456772011398389999689999998615472898036789976799989842797545998444445863
Q 000669 663 KSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSLFEIFPHWYPKQVGDI 742 (1362)
Q Consensus 663 ~~~~~~~~~~a~~~V~y~GqpVa~VVA~t~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~a~~~~~~~~~~~~~Gd~ 742 (1362)
...++|+|++++|||+|||||+|||+|+|+|++|+++|+|+| |++ |+++++++|++++++.... .....||+
T Consensus 78 --~~~~~~~la~~~Vry~Gq~Va~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~a~~~~~~~~~~---~~~~~Gd~ 149 (755)
T 3nvz_C 78 --LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTY--EDL-PAIITIEDAIKNNSFYGSE---LKIEKGDL 149 (755)
T ss_dssp --TTSCEESSCCSEECSTTCEEEEEEESSHHHHHHHHHTCEEEE--EEC-CCCCSHHHHHHTTCEEEEE---EEEEESCH
T ss_pred --CCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHCCCCEEE--ECC-CCCCCHHHHHHCCCCCCCC---CCCCCCCH
T ss_conf --777753356775897698599999899999999950464588--758-8779999985145766777---43135897
Q ss_pred HHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEC-CCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
Q ss_conf 333101461157889995750478979990899989-9981999929988489999999882999962999974479888
Q 000669 743 TKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPD-EDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGGGF 821 (1362)
Q Consensus 743 ~~a~~~a~~vvve~~y~~~~q~H~~mEp~~a~A~~~-~dg~l~V~~stQ~p~~vq~~iA~~Lgip~~kV~V~~~~vGGgF 821 (1362)
+++|++++++ ||++|++++|+|+||||++++|+|+ ++|+|+||+|||+|+.+|..+|++||||++||||+++++||||
T Consensus 150 ~~a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgF 228 (755)
T 3nvz_C 150 KKGFSEADNV-VSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGF 228 (755)
T ss_dssp HHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCT
T ss_pred HHHHHCCCEE-EEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf 6775128868-877898477112578886599999679996999979978899999999987899861899979787999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEE
Q ss_conf 98667642011001345322159999999998569989999177788864199995799999965889959999999983
Q 000669 822 GGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILI 901 (1362)
Q Consensus 822 GgK~~~~~~~~~~~~~~~~~~~~a~~aAlaA~~~gRPVkl~~sRee~~~~~~~R~~~~~~~k~~~~~dG~i~a~~~~~~~ 901 (1362)
|+|...... +++.||++|+++||||||+|||+|+|..+++||++.+++|+++|+||+|+||+++++.
T Consensus 229 G~K~~~~~~-------------~~~~aa~aA~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~ 295 (755)
T 3nvz_C 229 GGKETRSTL-------------VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYS 295 (755)
T ss_dssp TTTSSTTHH-------------HHHHHHHHHHHHSSCEEEECCHHHHHHHSCCBCCEEEEEEEEECTTCCEEEEEEEEEE
T ss_pred CCCCCCCCH-------------HHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEE
T ss_conf 876556635-------------9999999999709988999368999732588876689999999999959999988898
Q ss_pred CCCCCCCCCC-HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 3897999875-156774116888767827999999645999766558988368898999999999999399999999961
Q 000669 902 DAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSIN 980 (1362)
Q Consensus 902 d~Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~~a~Rg~G~~q~~fa~E~~idelA~~lg~DP~e~R~~N 980 (1362)
|+|+|.+.+. ++.+.+.++.++|++||++++++.|+||+++++||||||.+|++|++|++|||+|++|||||+|||++|
T Consensus 296 d~Ga~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~~a~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N 375 (755)
T 3nvz_C 296 NAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKN 375 (755)
T ss_dssp EEESSCTTHHHHHHHHHHTTTTTBCCSSEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 36737674178999999745877467728999999868989887536898078899999999999999791989999972
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCC-----CCCEE
Q ss_conf 788887654334788975557-989999999970792467999999862399850122453157505568-----87489
Q 000669 981 LHTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVK-----SSPGK 1054 (1362)
Q Consensus 981 l~~~g~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGia~a~~~~~~~~~-----~~~a~ 1054 (1362)
++++++.+ ++|+++++ .+++||+++++.++|++|+++.+.||++++|++||+|+++..++++++ ++.+.
T Consensus 376 ~~~~~~~~-----~~g~~~~s~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGig~~~~~~g~g~~~~~~~~~~a~ 450 (755)
T 3nvz_C 376 MYKEGDLT-----HFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGAL 450 (755)
T ss_dssp BCCTTCBC-----TTCCBCTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHCSSEEEEEEEEEEEEEESCSSGGGCEEEEE
T ss_pred CCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEE
T ss_conf 78999858-----8885506887999999999855988877777753104786410589998873313567888861289
Q ss_pred EEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 99947995999957755687755999999998719887898899999479981998876688778233310003999999
Q 000669 1055 VSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRL 1134 (1362)
Q Consensus 1055 v~i~~DGsv~v~~g~~e~GqG~~T~~~qiaA~~Lgi~~~~~~~~p~~~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~ 1134 (1362)
|+|++||||+|.+|++|||||++|+++||||++||| |+++|+|..+||+.+|++++|+|||+|+++|.||++
T Consensus 451 v~l~~DG~v~v~~g~~e~GQG~~T~~aQiaAe~Lgi--------~~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~ 522 (755)
T 3nvz_C 451 IHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKI--------PISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYE 522 (755)
T ss_dssp EEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS--------CGGGEECCCEETTTSCSCCCSCTTCHHHHHHHHHHH
T ss_pred EEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC--------CHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999169829999888778988789999999999799--------878889977788888999997235789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEECCC----------CCCCCCEEEEEE---EEEECCC
Q ss_conf 999999999999988652049779999999985148315898975389----------998751006999---9999547
Q 000669 1135 CCNVLVERLSALRGRLLERMGSVNWETLIQQAHLQSVNLSASSLYVPD----------STSIHYLNYGAA---VEVNLLT 1201 (1362)
Q Consensus 1135 Ac~~L~~rl~~~~~~l~~~~~~~~w~~~~~~a~~~~~~l~a~~~~~~~----------~~~~~~~~~~a~---VEVD~~T 1201 (1362)
||++|++||.++++.. ...+|.+++..++...+.|.++++|.++ ++++.+++|+++ ||||++|
T Consensus 523 Aa~~l~~~l~~~aa~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~aeVeVD~~T 598 (755)
T 3nvz_C 523 ACQTILKRLEPFKKKN----PDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLT 598 (755)
T ss_dssp HHHHHHHHHHHHHHHC----TTSCHHHHHHHHHHTTCCCEEEEEEECSSCCCBTTTTBSCSCSEEEEEEEEEEEEEETTT
T ss_pred HHHHHHHHHHHHHHHC----CCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC
T ss_conf 9999999999987417----898899999886304664279999706876666556778876545357899999998899
Q ss_pred CCEEEEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 96999999999916987791202112020458667898601431279985335899999899989889720899931799
Q 000669 1202 GETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGH 1281 (1362)
Q Consensus 1202 G~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~aL~Ee~~~d~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~ 1281 (1362)
|+++|+|+++++|||++|||.+++||||||++||||++|+||+.||++|+++|++|++|++|++.|+|++|+|++++..+
T Consensus 599 G~v~v~r~~~v~D~G~~iNP~~~~GQi~GG~~qGiG~aL~Ee~~~d~~G~~~t~~~~dY~iP~~~DiP~~~~v~~~~~~~ 678 (755)
T 3nvz_C 599 GDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCP 678 (755)
T ss_dssp CCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCBCTTSCBCCCSTTTSCCCCGGGSCSEEEEEECSSCC
T ss_pred CCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHCCCCCHHHCCCCEEEEEEECCC
T ss_conf 98899899999968855798998898973588899888608539889998778988765697633179847999982789
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH---HHCCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCHHHH
Q ss_conf 9888888775589995413339999999999998---71011367888864021479999689999708990789
Q 000669 1282 HQKRVLSSKASGEPPLLLAVSVHCATRAAIREAR---KQLLTWSDLDRSDITFNLEVPATMPVVKELCGLDSVER 1353 (1362)
Q Consensus 1282 ~p~g~~gsKg~GE~~~~~~~av~~Ai~nAi~~A~---~~~~~~~~~~g~~~~~~~~~P~tpe~I~~a~~~~~~~~ 1353 (1362)
+|.+|||+||+||++++++++|++||+|||++|+ .+. |..+++.+++|+|||||+++|...+.++
T Consensus 679 ~p~~p~GaKGvGE~~~~~~~av~~Ai~~Av~~A~~~~~~~-------g~~g~~~~~~P~Tpe~v~~a~~~~~~~~ 746 (755)
T 3nvz_C 679 NKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQHTNN-------NTKELFRLDSPATPEKIRNACVDKFTTL 746 (755)
T ss_dssp CTTSGGGBCCCSSTTGGGGHHHHHHHHHHHHHHHHHHTCS-------CTTCCCCCCBSCCHHHHHHHSCSTTTSC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-------CCCCCEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999988723586542202779999999999876310013-------6678551379999999999976778863
No 6
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=1.00 E-value=1 Score=1365.71 Aligned_cols=716 Identities=33% Similarity=0.481 Sum_probs=648.9
Q ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 88986555542031232321233578899957999976488891981014755879998599997289899987756556
Q 000669 585 PVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCKS 664 (1362)
Q Consensus 585 ~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~~~a~I~sID~s~A~~~pGVv~vit~~Dip~~g~n~~~~~ 664 (1362)
+||++++|+|+..||||+++|++|++.+|||||++++|||++||+|++||+++|+++|||++|+|++|+| +.|. ...
T Consensus 2 ~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~V~t~~d~p--~~~~-~g~ 78 (777)
T 2w3s_B 2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLP--HDND-ASP 78 (777)
T ss_dssp CTTSCCCCTTHHHHHHTCCCCGGGSCCCTTCEEEEEEECSCSSEEEEEEECHHHHTSTTEEEEEEGGGCS--SCCC-CCS
T ss_pred CCCCCCCCCCHHHHCCCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHHCCCCCEEEEECCCCC--CCCC-CCC
T ss_conf 8899887856587665522410246789998899999789898599986868974089958999766677--7666-777
Q ss_pred CCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCC-CCCCCCCCCCCCCCHH
Q ss_conf 789954456772011398389999689999998615472898036789976799989842797-5459984444458633
Q 000669 665 MFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSL-FEIFPHWYPKQVGDIT 743 (1362)
Q Consensus 665 ~~~~~~~~a~~~V~y~GqpVa~VVA~t~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~a~-~~~~~~~~~~~~Gd~~ 743 (1362)
...++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++++++|+++++. .. .. .....||++
T Consensus 79 ~~~~~~~la~~~Vry~GqpVa~VvA~t~~~A~~Aa~~v~V~y--e~l-p~v~~~~~a~~~~~~~~~-~~--~~~~~Gd~~ 152 (777)
T 2w3s_B 79 APSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITY--APR-PAILTLDQALAADSRFEG-GP--VIWARGDVE 152 (777)
T ss_dssp SSSCCCSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CCCCSHHHHHHHTCBSSS-SC--EEEEESCHH
T ss_pred CCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHCCEEEEE--ECC-CCCCCHHHHHHCCCCCCC-CC--CCCCCCCHH
T ss_conf 777763245866876698099999899999999736507999--748-987999999614676536-76--531368866
Q ss_pred HHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
Q ss_conf 33101461157889995750478979990899989998199992998848999999988299996299997447988898
Q 000669 744 KGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDEDNCMVVYSSTQCPENVHATISRCLGIPQHNVRVITRRLGGGFGG 823 (1362)
Q Consensus 744 ~a~~~a~~vvve~~y~~~~q~H~~mEp~~a~A~~~~dg~l~V~~stQ~p~~vq~~iA~~Lgip~~kV~V~~~~vGGgFGg 823 (1362)
++|++++++ +|++|++++|+|+||||++++|+|++|+ |+||+|||+|+.+|..+|++||||++||||+++++|||||+
T Consensus 153 ~a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~-l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~ 230 (777)
T 2w3s_B 153 TALAGAAHL-AEGCFEIGGQEHFYLEGQAALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGG 230 (777)
T ss_dssp HHHHTCSEE-EEEEEEECCCCCCCSSCCEEEEEEETTE-EEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTT
T ss_pred HHHHCCCEE-EEEEEEECCCCCCCCCCCEEEEEEECCC-CEEEECCCCHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCC
T ss_conf 775129869-9999998985333776876999997996-19997986879999999999788979989995778899986
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECC
Q ss_conf 66764201100134532215999999999856998999917778886419999579999996588995999999998338
Q 000669 824 KFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKITALQLNILIDA 903 (1362)
Q Consensus 824 K~~~~~~~~~~~~~~~~~~~~a~~aAlaA~~~gRPVkl~~sRee~~~~~~~R~~~~~~~k~~~~~dG~i~a~~~~~~~d~ 903 (1362)
|.+...+ +++.+|++|+++||||||+|||+|+|..+++||++.+++|+++|+||+|++++++++.|+
T Consensus 231 K~~~~~~-------------~~~~aA~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~ 297 (777)
T 2w3s_B 231 KESQGNH-------------LAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARC 297 (777)
T ss_dssp TTTTTHH-------------HHHHHHHHHHHHSSCEEEECCHHHHHHHSCCCCCEEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred CCCCCCH-------------HHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECC
T ss_conf 8564652-------------999999999982999899952799863168888657999999999997999999998768
Q ss_pred CCCCCCCC-HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
Q ss_conf 97999875-15677411688876782799999964599976655898836889899999999999939999999996178
Q 000669 904 GMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSMEVDFVRSINLH 982 (1362)
Q Consensus 904 Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~~a~Rg~G~~q~~fa~E~~idelA~~lg~DP~e~R~~Nl~ 982 (1362)
|+|.+++. ++.+.+.++.++|++||++++++.|+||+++++||||||.+|++|++|++|||+|++|||||+|||++|+.
T Consensus 298 Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~ 377 (777)
T 2w3s_B 298 GWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFY 377 (777)
T ss_dssp CSSCTTHHHHHHHHHHTTTTTBCCSSEEEEEEEECCSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHTTBC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
T ss_conf 85666633578899975277614687899999985798988765788758999999999999999969299999998456
Q ss_pred CC------------------CCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEEEE
Q ss_conf 88------------------87654334788975557-989999999970792467999999862399850122453157
Q 000669 983 TR------------------NSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIV 1043 (1362)
Q Consensus 983 ~~------------------g~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGia~a~~~ 1043 (1362)
++ ++ |+.++.|+.+++ ++++||+++++.++|++|+++...||.+++|++||+||++..
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~---p~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGiG~a~~~ 454 (777)
T 2w3s_B 378 DPPERGGLSAPPSPPEPIATKK---TQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVK 454 (777)
T ss_dssp CCC-----------------CC---CCBCTTCCBCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHTCSSEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEEEE
T ss_conf 7655654332100124557898---8537798542679799999999886697788888987642799726999999856
Q ss_pred EECCCC-----CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 505568-----874899994799599995775568775599999999871988789889999947998199887668877
Q 000669 1044 HEMFVK-----SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGT 1118 (1362)
Q Consensus 1044 ~~~~~~-----~~~a~v~i~~DGsv~v~~g~~e~GqG~~T~~~qiaA~~Lgi~~~~~~~~p~~~I~v~~~dT~~~p~~~~ 1118 (1362)
|++++. ++.+.|+|++||||+|.+|++|||||++|+++||||++||| |+|+|+|..+||+.+|++++
T Consensus 455 ~g~~~~~~~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~~~ 526 (777)
T 2w3s_B 455 FGISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGI--------DPVQVRITATDTSKVPNTSA 526 (777)
T ss_dssp EECSCSSGGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS--------CGGGEEECCEETTTSCSCCC
T ss_pred ECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC--------CHHHEEEECCCCCCCCCCCC
T ss_conf 8654555668877569999069829999898368988668999999999799--------88989997278787899998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------C-------CCCCHHHHHHHHHHCCCEEEEEEEECCCC
Q ss_conf 82333100039999999999999999999886520--------4-------97799999999851483158989753899
Q 000669 1119 TSGSTTSESSCEAVRLCCNVLVERLSALRGRLLER--------M-------GSVNWETLIQQAHLQSVNLSASSLYVPDS 1183 (1362)
Q Consensus 1119 t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~l~~~--------~-------~~~~w~~~~~~a~~~~~~l~a~~~~~~~~ 1183 (1362)
|+|||+|+++|+||++||++|++||.++++.++.. + ..++|.+++..++..++.|.++++|.++.
T Consensus 527 t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~~~~~~~~l~~~~g~v~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~~~ 606 (777)
T 2w3s_B 527 TAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATPK 606 (777)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCEEETTEEEETTEEEEHHHHHHHHHHTTCCCEEEEEEECSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf 73335789999999999999999999987877199879989979999979986269999987652476448899984787
Q ss_pred ----------CCCCCEEEEEE---EEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHCCCEECCCC
Q ss_conf ----------98751006999---99995479699999999991698779120211202045866789860143127998
Q 000669 1184 ----------TSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNSDG 1250 (1362)
Q Consensus 1184 ----------~~~~~~~~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~aL~Ee~~~d~~G 1250 (1362)
.++.|++|+++ ||||++||+++|+|+++++|||++|||.+++||||||++||||++|+||+.||++|
T Consensus 607 ~~~~~~~~~g~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~GQi~GG~~qGiG~aL~Ee~~~d~~G 686 (777)
T 2w3s_B 607 LSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCG 686 (777)
T ss_dssp CEEETTTTEEECCSCEEEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHTTTCCCCBCTTS
T ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCHHHEEEEEECCCC
T ss_conf 56553346788766400156899999946778799999999997874479899888887427742145530235999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
Q ss_conf 53358999998999898897208999317999888888775589995413339999999999998710113678888640
Q 000669 1251 LVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSDIT 1330 (1362)
Q Consensus 1251 ~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~p~g~~gsKg~GE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g~~~~ 1330 (1362)
+++|++|++|++|++.|+|++|+|+++++++++.+|||+||+||+++++++++++||.|||++|++. +
T Consensus 687 ~~~t~~~~~Y~iP~~~DvP~~~~v~~~e~~~~~~~p~gaKGvGE~~~~~~~a~~~Ai~~Ai~~a~g~------------~ 754 (777)
T 2w3s_B 687 RLMTHAPSTYKIPAFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPH------------W 754 (777)
T ss_dssp CBSCCSTTTSCCCCGGGSCSEEEEEEECCCCSSCCGGGBCCCSSGGGGGGHHHHHHHHHHHTTSCSS------------C
T ss_pred CCCCCCHHHCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC------------C
T ss_conf 8898996755596365378846999971799888987875256662120688999999999873288------------4
Q ss_pred ECCCCCCCHHHHHHHCC
Q ss_conf 21479999689999708
Q 000669 1331 FNLEVPATMPVVKELCG 1347 (1362)
Q Consensus 1331 ~~~~~P~tpe~I~~a~~ 1347 (1362)
+.+++|+|||+|+++|.
T Consensus 755 ~~~~~P~Tpe~v~~al~ 771 (777)
T 2w3s_B 755 PDLQAPATPEAVLAAVR 771 (777)
T ss_dssp CCCCSSCCHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
T ss_conf 40589989999999986
No 7
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=1.00 E-value=1 Score=1343.98 Aligned_cols=723 Identities=22% Similarity=0.249 Sum_probs=639.2
Q ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 88788986555542031232321233578899957999976488891981014755879998599997289899987756
Q 000669 582 EYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIG 661 (1362)
Q Consensus 582 ~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~~~a~I~sID~s~A~~~pGVv~vit~~Dip~~g~n~~ 661 (1362)
.++.||++++|+|+..||||+++|++|++ +|||||+++||||++||+|++||+++|+++|||++|+|++|+| +.+.+
T Consensus 14 ~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aharI~sID~s~A~~~PGV~~V~t~~D~p--~~~~~ 90 (803)
T 1ffv_B 14 ALAGMGASRLRKEDARFIQGKGNYVDDIK-MPGMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLK--PLKLH 90 (803)
T ss_dssp HHTCTTCCCCCSSHHHHTTTCCCCGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECHHHHG--GGTCS
T ss_pred HHCCCCCCCCCCCHHHHCCCCEECCCCCC-CCCCEEEEEEECCCCCEEEEEEEHHHHHCCCCEEEEEEHHHCC--CCCCC
T ss_conf 21227998767576764553003102268-8997899999679887599885537875089859999666666--76666
Q ss_pred CCC--CCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCC--CCC-CC----
Q ss_conf 556--789954456772011398389999689999998615472898036789976799989842797--545-99----
Q 000669 662 CKS--MFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSL--FEI-FP---- 732 (1362)
Q Consensus 662 ~~~--~~~~~~~~a~~~V~y~GqpVa~VVA~t~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~a~--~~~-~~---- 732 (1362)
... ...++++|++++|+|+|||||+|||+|+++|++|+++|+|+| |++ |+++++++|++++++ |+. +.
T Consensus 91 ~~~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~~~~~~ 167 (803)
T 1ffv_B 91 WMPTLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEY--DEL-PVVIDPIDALKPDAPVLREDLAGKTSG 167 (803)
T ss_dssp EEECTTSCEEESSCCSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCHHHHTSTTCCCSCGGGTTCCEE
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHCCCEEEE--EEC-CCCCCHHHHHHCCCCEECCCCCCCCCC
T ss_conf 55666777652366866877589689999899999999836777998--607-864899999516996014555664434
Q ss_pred --------CCC---CCCC-CCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEECC-CCCEEEEECCCCHHHHHHHH
Q ss_conf --------844---4445-8633331014611578899957504789799908999899-98199992998848999999
Q 000669 733 --------HWY---PKQV-GDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDE-DNCMVVYSSTQCPENVHATI 799 (1362)
Q Consensus 733 --------~~~---~~~~-Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~a~A~~~~-dg~l~V~~stQ~p~~vq~~i 799 (1362)
|+. .... ||++++|++++++ +|++|++++|+|+||||++++|+|++ +|+|+||+|||+|+.+|..+
T Consensus 168 ~~~~~~~~n~~~~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~l 246 (803)
T 1ffv_B 168 AHGPREHHNHIFTWGAGDKAATDAVFANAPVT-VSQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTVV 246 (803)
T ss_dssp TTEECSSTTEEEEEEEECHHHHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEE-EEEEEEECCEECCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHH
T ss_conf 44455566523311100158755664139879-99999989870237878669999918996499997987889999999
Q ss_pred HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEE
Q ss_conf 98829999629999744798889866764201100134532215999999999856998999917778886419999579
Q 000669 800 SRCLGIPQHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMK 879 (1362)
Q Consensus 800 A~~Lgip~~kV~V~~~~vGGgFGgK~~~~~~~~~~~~~~~~~~~~a~~aAlaA~~~gRPVkl~~sRee~~~~~~~R~~~~ 879 (1362)
|++||||++||||+++++|||||+|..... ..+.+|++|+++||||||+|||+|+|..+++||++.
T Consensus 247 A~~Lglp~~~VrV~~~~vGGgFG~K~~~~~--------------~~~~aa~~A~~~grPVkl~~tR~e~~~~~~~R~~~~ 312 (803)
T 1ffv_B 247 SMLSGIPESKVRIVSPDIGGGFGNKVGIYP--------------GYVCAIVASIVLGRPVKWVEDRVENISTTAFARDYH 312 (803)
T ss_dssp HHHHCCCGGGEEEECCCCSCCTTTTSSCCH--------------HHHHHHHHHHHHTSCEEEECCHHHHHHHSCEECCEE
T ss_pred HHHHCCCHHHEEEEECCCCCCCCCCCCCCH--------------HHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCEE
T ss_conf 998699878989996877788874543557--------------899999999972999899943089753148988759
Q ss_pred EEEEEEECCCCCEEEEEEEEEECCCCCCC-CCC-HHHHHH-HCCCCCCCCCCEEEEEEEEECCCCCCC-CCCCCCH-HHH
Q ss_conf 99999658899599999999833897999-875-156774-116888767827999999645999766-5589883-688
Q 000669 880 ISYSVGFKSNGKITALQLNILIDAGMYPD-ISP-VMPMIM-LGTLKKYDWGALHFDIKVCRTNLPSRS-AMRAPGE-VQA 954 (1362)
Q Consensus 880 ~~~k~~~~~dG~i~a~~~~~~~d~Ga~~~-~~~-~~~~~~-~~~~~~Y~ipn~~~~~~~v~Tn~~~~~-a~Rg~G~-~q~ 954 (1362)
+++|+++|+||+|+|++++++.|+|+|.+ ++. +..+.. ..+.++|++||++++++.|+||++|++ ||||||. +|+
T Consensus 313 ~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~g~a~Rg~G~~~q~ 392 (803)
T 1ffv_B 313 MDGELAATPDGKILGLRVNVVADHGAFDACADPTKFPAGLFHICSGSYDIPRAHCSVKGVYTNKAPGGVAYXXSFRVTEA 392 (803)
T ss_dssp EEEEEEECTTCCEEEEEEEEEEECCSSCCCCCCTTCTTTTGGGTTTTBCCSEEEEEEEEECCSSCCEESCSSCTTTHHHH
T ss_pred EEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCEECCCCCCHH
T ss_conf 99999999999899999999963776554345036778877432887367748999999976899986320236877314
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHHHHHHHHCCC-C
Q ss_conf 98999999999999399999999961788887654334788975557-989999999970792467999999862399-8
Q 000669 955 SFIAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFNQRTEMIKEFNRSNL-W 1032 (1362)
Q Consensus 955 ~fa~E~~idelA~~lg~DP~e~R~~Nl~~~g~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~-~ 1032 (1362)
+|++|++||++|++|||||+|||++|+.++++ ++|.+++|+.+++ ++++||+++++.++|.+++++..++|+.++ |
T Consensus 393 ~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~--~p~~~~~g~~~~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~g~~~ 470 (803)
T 1ffv_B 393 VYLIERMVDVLAQKLNMDKAEIRAKNFIRKEQ--FPYTTQFGFEYDSGDYHTALKKVLDAVDYPALRAEQAARRADPNSP 470 (803)
T ss_dssp HHHHHHHHHHHHHHHTCCTTHHHHHHBCCGGG--CSEECTTSCEECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHCTTCS
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
T ss_conf 78899999999999790999999971889776--7643677730577669999999998779466777767664059876
Q ss_pred CEEEEEEEEEEEECCCC------------CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 50122453157505568------------874899994799599995775568775599999999871988789889999
Q 000669 1033 QKRGICRVPIVHEMFVK------------SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLL 1100 (1362)
Q Consensus 1033 ~krGia~a~~~~~~~~~------------~~~a~v~i~~DGsv~v~~g~~e~GqG~~T~~~qiaA~~Lgi~~~~~~~~p~ 1100 (1362)
++||+||++..++.+++ ++.+.|+|++||+|+|.+|++|||||++|+++||||++||| |+
T Consensus 471 ~~rGiG~a~~~~~~g~~~~~~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------~~ 542 (803)
T 1ffv_B 471 TLMGIGLVTFTEVVGAGPSKMCDILGVGMFDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATELGI--------PS 542 (803)
T ss_dssp EEEEEEEEEEECCBCCCCTTTCEETTEESCEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTC--------CG
T ss_pred CEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC--------CH
T ss_conf 2379999998872255632223555667763179999569849999899677888899999999999799--------88
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC------------------CCCCCHHHH
Q ss_conf 94799819988766887782333100039999999999999999999886520------------------497799999
Q 000669 1101 DKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLER------------------MGSVNWETL 1162 (1362)
Q Consensus 1101 ~~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~l~~~------------------~~~~~w~~~ 1162 (1362)
|+|+|..+||+.+|++++|+|||+|+++|+||++||++|++||.++++.++.. +..++|.++
T Consensus 543 e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~el 622 (803)
T 1ffv_B 543 EVIQVEEGDTSTAPYGLGTYGSRSTPVAGAAIALAARKIHAKARKIAAHMLEVNENDLDWEVDRFKVKGDDSKFKTMADI 622 (803)
T ss_dssp GGEEEECCBTTTSCCCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEECSSEEEESSCTTCEEEHHHH
T ss_pred HHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCEEEECCCCCCCCCHHHH
T ss_conf 98999647878789999863022788899999999999999999998877389878979968999981798886479999
Q ss_pred HHHHHHC---CC--EEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCHHHHHHH
Q ss_conf 9998514---83--158989753899987510069999999547969999999999169877912021120204586678
Q 000669 1163 IQQAHLQ---SV--NLSASSLYVPDSTSIHYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIG 1237 (1362)
Q Consensus 1163 ~~~a~~~---~~--~l~a~~~~~~~~~~~~~~~~~a~VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG 1237 (1362)
+..++.. +. .|.++++|.+....++|.++.++||||++||+++|+|+++++|||++|||.+++||||||++||||
T Consensus 623 ~~~a~~~~~~~~~~gl~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG 702 (803)
T 1ffv_B 623 AWQAYHQPPAGLEPGLEAVHYYDPPNFTYPFGIYLCVVDIDRATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTEGYA 702 (803)
T ss_dssp HHHHHHCCCTTCCSSEEEEEEECCSSCBCCEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99887526755455504666406888875406799999997677739999999999798457989988889988998999
Q ss_pred HHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 98601431279985335899999899989889720899931799988888877558999541333999999999999871
Q 000669 1238 FFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQ 1317 (1362)
Q Consensus 1238 ~aL~Ee~~~d~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~p~g~~gsKg~GE~~~~~~~av~~Ai~nAi~~A~~~ 1317 (1362)
++|+||+.||++|+++|+||++|++|++.|+|+ |+|++++++ ++.+|||+||+||+++++ +++||+|||++|+.+
T Consensus 703 ~aL~Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~-i~v~~~e~p-~~~~p~GaKGvGE~~~~~---~apAiaNAI~~A~~~ 777 (803)
T 1ffv_B 703 VAMGQQMPFDAQGNLLGNTLMDYFLPTAVETPH-WETDHTVTP-SPHHPIGAKGVAESPHVG---SIPTFTAAVVDAFAH 777 (803)
T ss_dssp HHHTCCCCBCTTCCBCSCSTTTSCCCCTTTSCC-CEEEECCCC-CTTSTTCBCCCTTHHHHH---HHHHHHHHHHHHHGG
T ss_pred HHHHCCEEECCCCCCCCCCHHHCCCCCCCCCCC-EEEEEEECC-CCCCCCCCCCCCCCCCCH---HHHHHHHHHHHHHHC
T ss_conf 997173178999978889976565997122787-589998579-999987772146774130---899999999999870
Q ss_pred CCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCH
Q ss_conf 011367888864021479999689999708990
Q 000669 1318 LLTWSDLDRSDITFNLEVPATMPVVKELCGLDS 1350 (1362)
Q Consensus 1318 ~~~~~~~~g~~~~~~~~~P~tpe~I~~a~~~~~ 1350 (1362)
. | .+++++|+|||+|+++|...+
T Consensus 778 ~-------G---~r~~~lP~tpe~v~~al~~~~ 800 (803)
T 1ffv_B 778 V-------G---VTHLDMPHTSYRVWKSLKEHN 800 (803)
T ss_dssp G-------T---CCCCCSCCCHHHHHHHHHHTT
T ss_pred C-------C---CCCCCCCCCHHHHHHHHHHCC
T ss_conf 5-------9---965568989999999866526
No 8
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=1.00 E-value=1 Score=1337.91 Aligned_cols=719 Identities=22% Similarity=0.269 Sum_probs=632.8
Q ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 78898655554203123232123357889995799997648889198101475587999859999728989998775655
Q 000669 584 YPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENIGCK 663 (1362)
Q Consensus 584 ~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~~~a~I~sID~s~A~~~pGVv~vit~~Dip~~g~n~~~~ 663 (1362)
..||++++|+|+..||||+++|++|++ +|||||+++||||++||+|++||+++|+++|||++|+|++|+| +.|+...
T Consensus 19 ~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aha~I~sID~s~A~~~PGV~~V~t~~D~p--~~~~~~~ 95 (809)
T 1n62_B 19 QGMGCKRKRVEDIRFTQGKGNYVDDVK-LPGMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLK--PLNLHYM 95 (809)
T ss_dssp TCTTCCCCCTHHHHHTTTCCCBGGGCC-CTTCEEEEEEECSCSSEEEEEEECHHHHHSTTEEEEEEHHHHG--GGTCSEE
T ss_pred CCCCCCCCCCCHHHHCCCEEEEHHHCC-CCCCEEEEEEECCCCCEEEEECCHHHHHHCCCEEEEEEHHHCC--CCCCCCC
T ss_conf 669998767666774565564132068-9998899999679886699743568886289849999767766--5556666
Q ss_pred CC--CCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCC--CCCC-CC------
Q ss_conf 67--8995445677201139838999968999999861547289803678997679998984279--7545-99------
Q 000669 664 SM--FGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSS--LFEI-FP------ 732 (1362)
Q Consensus 664 ~~--~~~~~~~a~~~V~y~GqpVa~VVA~t~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~a--~~~~-~~------ 732 (1362)
.. ..++|+|++++|+|+|||||+|||+|+++|++|+++|+|+| |++ |+++++++|+++++ +|+. +.
T Consensus 96 ~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~~~~~~~~ 172 (809)
T 1n62_B 96 PTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDY--EPL-PVLVDPFKAMEPDAPLLREDIKDKMTGAH 172 (809)
T ss_dssp ECTTSSEEESSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCGGGTTSTTCCCCCGGGTTCCEETT
T ss_pred CCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHCCCEEEE--EEC-CCCCCHHHHHHCCCCEECCCCCCCCCCCC
T ss_conf 666788753466865887588289999899999999837664999--708-87589999851489612466566443444
Q ss_pred ------CCC---CCCC-CCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEECC-CCCEEEEECCCCHHHHHHHHHH
Q ss_conf ------844---4445-8633331014611578899957504789799908999899-9819999299884899999998
Q 000669 733 ------HWY---PKQV-GDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDE-DNCMVVYSSTQCPENVHATISR 801 (1362)
Q Consensus 733 ------~~~---~~~~-Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~a~A~~~~-dg~l~V~~stQ~p~~vq~~iA~ 801 (1362)
|+. .... ||++++|++|+++ +|++|++++|+|+||||++++|+|++ +|+|+||+|||+|+.+|..+|+
T Consensus 173 ~~~~~~n~~~~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~~A~ 251 (809)
T 1n62_B 173 GARKHHNHIFRWEIGDKEGTDATFAKAEVV-SKDMFTYHRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSL 251 (809)
T ss_dssp EECSSTTEEEEEEEECHHHHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSSHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCCCCEE-EEEEEEECCEECCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 555666413322102368755664029879-9999998988023777866999995899739999898676999999999
Q ss_pred HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEEE
Q ss_conf 82999962999974479888986676420110013453221599999999985699899991777888641999957999
Q 000669 802 CLGIPQHNVRVITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKIS 881 (1362)
Q Consensus 802 ~Lgip~~kV~V~~~~vGGgFGgK~~~~~~~~~~~~~~~~~~~~a~~aAlaA~~~gRPVkl~~sRee~~~~~~~R~~~~~~ 881 (1362)
+||||++||||+++++|||||+|..... ..+.||++|+++||||||+|||+|+|..+++||++.++
T Consensus 252 ~Lglp~~~VrV~~~~vGGgFG~K~~~~~--------------~~~~aA~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~ 317 (809)
T 1n62_B 252 ISGLPEHKIHVIAPDIGGGFGNKVGAYS--------------GYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDYHMT 317 (809)
T ss_dssp HHCCCGGGEEEECCBCSCCTTTTSSCCH--------------HHHHHHHHHHHHSSCEEEECCHHHHHHHSCEECCEEEE
T ss_pred HHCCCHHHEEEEECCCCCCCCCCCCCCH--------------HHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCEEEE
T ss_conf 8699978989983877877865666566--------------89999999997299989996159986425898875999
Q ss_pred EEEEECCCCCEEEEEEEEEECCCCCCC-CCC-HHHHH-HHCCCCCCCCCCEEEEEEEEECCCCCCC-CCCCCCH-HHHHH
Q ss_conf 999658899599999999833897999-875-15677-4116888767827999999645999766-5589883-68898
Q 000669 882 YSVGFKSNGKITALQLNILIDAGMYPD-ISP-VMPMI-MLGTLKKYDWGALHFDIKVCRTNLPSRS-AMRAPGE-VQASF 956 (1362)
Q Consensus 882 ~k~~~~~dG~i~a~~~~~~~d~Ga~~~-~~~-~~~~~-~~~~~~~Y~ipn~~~~~~~v~Tn~~~~~-a~Rg~G~-~q~~f 956 (1362)
+|+++|+||+|+|++++++.|+|+|.+ ++. +..+. ...+.++|++||++++++.|+||++|++ ||||||. +|++|
T Consensus 318 ~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~g~a~Rg~G~~~q~~f 397 (809)
T 1n62_B 318 TELAATKDGKILAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYRCSFRVTEAVY 397 (809)
T ss_dssp EEEEECTTCCEEEEEEEEEEECCSSCCCCCCTTCTTTTGGGTTTTBCCSCEEEEEEEECCSSCCEESCSSCTTTHHHHHH
T ss_pred EEEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCHHHHH
T ss_conf 99999999959999999998478676554514666666632378767774999999997889987877228983089999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHHH----HHHHHCCC
Q ss_conf 999999999999399999999961788887654334788975557-9899999999707924679999----99862399
Q 000669 957 IAEAVIEHVASTLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFNQRTEMI----KEFNRSNL 1031 (1362)
Q Consensus 957 a~E~~idelA~~lg~DP~e~R~~Nl~~~g~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~----~~~n~~~~ 1031 (1362)
++|++||++|++|||||+|||++|+.++++ ++|.+++|+.+++ ++++||+++++.++|.+++++. ..||...+
T Consensus 398 a~E~~mDelA~~lG~DP~e~R~~N~~~~~~--~p~~~~~g~~~~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~fn~g~~ 475 (809)
T 1n62_B 398 AIERAIETLAQRLEMDSADLRIKNFIQPEQ--FPYMAPLGWEYDSGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGET 475 (809)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHBCCGGG--CSEECTTSCEECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 999999999999790999999972567787--764367773058878999999999876954667767765543126987
Q ss_pred CCEEEEEEEEEEEECCCC------------CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 850122453157505568------------87489999479959999577556877559999999987198878988999
Q 000669 1032 WQKRGICRVPIVHEMFVK------------SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDL 1099 (1362)
Q Consensus 1032 ~~krGia~a~~~~~~~~~------------~~~a~v~i~~DGsv~v~~g~~e~GqG~~T~~~qiaA~~Lgi~~~~~~~~p 1099 (1362)
|++||+||++..++.+++ .+.+.|+|++||||+|.+|++|||||++|+++||||++||| |
T Consensus 476 ~~~rGiGia~~~~~~g~~~~~~~~~~~~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------p 547 (809)
T 1n62_B 476 REIMGIGISFFTEIVGAGPSKNCDILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGI--------P 547 (809)
T ss_dssp SEEEEEEEEEEECCBSCCCTTTCEETTEECCEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTC--------C
T ss_pred CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC--------C
T ss_conf 43689999998885034532223555667764379999569809999899778888889999999999699--------8
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC------------------CCCCCHHH
Q ss_conf 994799819988766887782333100039999999999999999999886520------------------49779999
Q 000669 1100 LDKVRVVQSDTLSLIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLER------------------MGSVNWET 1161 (1362)
Q Consensus 1100 ~~~I~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~l~~~------------------~~~~~w~~ 1161 (1362)
+|+|+|..+||+.+|++++|+|||+|+++|+||++||++|++||.++++.++.. +..++|.+
T Consensus 548 ~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~e 627 (809)
T 1n62_B 548 ADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKE 627 (809)
T ss_dssp GGGEEEECCBTTTSCCCCCSCTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGEEECSSEEEETTEEEEEEEHHH
T ss_pred HHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCEEEECCCCCCCCCHHH
T ss_conf 89899964787878999986213488999999999999999999999887728987897996899998269887626999
Q ss_pred HHHHHHHC---CC--EEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCHHHHHH
Q ss_conf 99998514---83--15898975389998751006999999954796999999999916987791202112020458667
Q 000669 1162 LIQQAHLQ---SV--NLSASSLYVPDSTSIHYLNYGAAVEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGI 1236 (1362)
Q Consensus 1162 ~~~~a~~~---~~--~l~a~~~~~~~~~~~~~~~~~a~VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~Gl 1236 (1362)
++..++.. ++ .|.++++|.++...++|.++.++||||++||+++|+|+++++|||++|||.+++||||||++|||
T Consensus 628 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~v~D~G~viNP~~~~gQieGG~~qGl 707 (809)
T 1n62_B 628 LAWASYNSPPPNLEPGLEAVNYYDPPNMTYPFGAYFCIMDIDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAF 707 (809)
T ss_dssp HHHHHHHSCCTTSCSSCEEEEEECCSSCBCCEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99988642675445562144211688786540679999999888685999999999978723799999988988899999
Q ss_pred HHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 89860143127998533589999989998988972089993179998888887755899954133399999999999987
Q 000669 1237 GFFMLEEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARK 1316 (1362)
Q Consensus 1237 G~aL~Ee~~~d~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~p~g~~gsKg~GE~~~~~~~av~~Ai~nAi~~A~~ 1316 (1362)
|++|+||+.||++|+++|+||++|++|++.|+|+ |+|++++++ ++.+|||+||+||+++++ +++||+|||++|+.
T Consensus 708 G~aL~Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~-i~v~~ve~~-~~~~p~GaKGvGE~~~~~---~apAiaNAI~~A~~ 782 (809)
T 1n62_B 708 AVAMGQEIRYDEQGNVLGASFMDFFLPTAVETPK-WETDYTVTP-SPHHPIGAKGVGESPHVG---GVPCFSNAVNDAYA 782 (809)
T ss_dssp HHHHTCCCEECTTCCEESCSTTTSCCCCTTTSCC-CEEEECCCC-CTTSTTSBCCCTTHHHHH---HHHHHHHHHHHHHH
T ss_pred HHHHHCCEEECCCCCCCCCCHHHCCCCCHHHCCC-EEEEEEECC-CCCCCCCCCCCCCCCCCH---HHHHHHHHHHHHHH
T ss_conf 9997071078999988989961256987421797-599998479-999998870467762013---89999999999987
Q ss_pred HCCCCCCCCCCCCEECCCCCCCHHHHHHHCCC
Q ss_conf 10113678888640214799996899997089
Q 000669 1317 QLLTWSDLDRSDITFNLEVPATMPVVKELCGL 1348 (1362)
Q Consensus 1317 ~~~~~~~~~g~~~~~~~~~P~tpe~I~~a~~~ 1348 (1362)
+. | .+++++|+|||+|+++|..
T Consensus 783 ~~-------G---~r~~~lP~tpe~v~~al~~ 804 (809)
T 1n62_B 783 FL-------N---AGHIQMPHDAWRLWKVGEQ 804 (809)
T ss_dssp TT-------T---CCCCCSCCCHHHHHHHHHH
T ss_pred HC-------C---CCCCCCCCCHHHHHHHHHH
T ss_conf 06-------9---9646689799999999875
No 9
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=1.00 E-value=1 Score=1336.24 Aligned_cols=707 Identities=24% Similarity=0.291 Sum_probs=633.5
Q ss_pred CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 78878898655554203123232123357889995799997648889198101475587999859999728989998775
Q 000669 581 REYYPVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGENI 660 (1362)
Q Consensus 581 ~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~~~a~I~sID~s~A~~~pGVv~vit~~Dip~~g~n~ 660 (1362)
+++++||++++|+|+..||||+++|++|+. +|||||+++||||++||+|++||+++|+++|||++|+|++|+| + |.
T Consensus 6 ~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~~gmL~a~~vrSp~aharI~siD~s~A~~~pGV~~V~t~~Dip--~-~~ 81 (769)
T 1rm6_A 6 PQHGTVGVRTPLVDGVEKVTGKAKYTADIA-APDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETP--V-PF 81 (769)
T ss_dssp ---CCTTSCCCCTTHHHHHHTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEGGGCC--S-CB
T ss_pred CCCCCCCCCCCCCCHHHHCCCEEEEHHCCC-CCCCEEEEEEECCCCCEEEEEEEHHHHHCCCCEEEEEEHHHCC--C-CC
T ss_conf 555767998868545774664233210068-9998799999788777478863036875289849998467767--7-66
Q ss_pred CCCCCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCC--CCC-CCCC---
Q ss_conf 6556789954456772011398389999689999998615472898036789976799989842797--545-9984---
Q 000669 661 GCKSMFGPEPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSSL--FEI-FPHW--- 734 (1362)
Q Consensus 661 ~~~~~~~~~~~~a~~~V~y~GqpVa~VVA~t~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~a~--~~~-~~~~--- 734 (1362)
+......++|+|++++|+|+|||||+|||+|+++|++|+++|+|+| |++ |+++++++|++++++ |+. ++|+
T Consensus 82 g~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~~~~~al~~~a~~~~~~~~~n~~~~ 158 (769)
T 1rm6_A 82 GVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDY--EVL-PAYMTPKAAMKAGAIALHDDKPNNILRE 158 (769)
T ss_dssp CSSTTCCCBCSSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCSHHHHHSTTCCCSSTTCTTSEEEE
T ss_pred CCCCCCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHCCCEEEE--EEC-CCCCCHHHHHCCCCCEECCCCCCCCCCC
T ss_conf 7777778863356987888698499999899999999847774999--607-8779999985047961146778762242
Q ss_pred CCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEECC-CCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 444458633331014611578899957504789799908999899-9819999299884899999998829999629999
Q 000669 735 YPKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDE-DNCMVVYSSTQCPENVHATISRCLGIPQHNVRVI 813 (1362)
Q Consensus 735 ~~~~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~a~A~~~~-dg~l~V~~stQ~p~~vq~~iA~~Lgip~~kV~V~ 813 (1362)
.....||++++|++|+++ +|++|++++|+|+||||++++|+|++ +|+|+||+|||+|+.+|..+|++||||++||||+
T Consensus 159 ~~~~~Gd~~~a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~~A~~Lglp~~~VrV~ 237 (769)
T 1rm6_A 159 VHAEFGDVAAAFAEADLI-REKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVI 237 (769)
T ss_dssp EEEEESCHHHHHHTCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCCCCHHHHHCCCCEE-EEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHEEEE
T ss_conf 332367754664239889-9999997985145778864999996899969999798688999999999869987898999
Q ss_pred ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEE
Q ss_conf 74479888986676420110013453221599999999985699899991777888641999957999999658899599
Q 000669 814 TRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGKIT 893 (1362)
Q Consensus 814 ~~~vGGgFGgK~~~~~~~~~~~~~~~~~~~~a~~aAlaA~~~gRPVkl~~sRee~~~~~~~R~~~~~~~k~~~~~dG~i~ 893 (1362)
++++|||||+|...... ++.+|++|+++||||||+|||+|+|..+++||++.+++|+++|+||+|+
T Consensus 238 ~~~vGGgFG~K~~~~~~--------------~~~aA~~A~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~ 303 (769)
T 1rm6_A 238 KPFLGGGFGARTEALHF--------------EIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIA 303 (769)
T ss_dssp CCBCCCCTTTTSSCCHH--------------HHHHHHHHHHHTSEEEEECCHHHHHHHCCCBCEEEEEEEEEECTTSCEE
T ss_pred ECCCCCCCCCCCCCCCH--------------HHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCEEE
T ss_conf 68778899976433428--------------9999999997199989996379986315898987999999989898399
Q ss_pred EEEEEEEECCCCCCCCCC-HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999999833897999875-1567741168887678279999996459997665589883688989999999999993999
Q 000669 894 ALQLNILIDAGMYPDISP-VMPMIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVASTLSME 972 (1362)
Q Consensus 894 a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~~a~Rg~G~~q~~fa~E~~idelA~~lg~D 972 (1362)
|++++++.|+|+|.+++. ++.+...++.++|++||++++++.|+||++|++||||||.+|++|++|++||++|++||||
T Consensus 304 a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~D 383 (769)
T 1rm6_A 304 ALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGID 383 (769)
T ss_dssp EEEEEEEEECCSSCTTHHHHHHHHHHTTSSSBCCSCEEEEEEEECCSSSCCCCCSSTTTHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999998078686653689999998527785777489999999898998865367876899999999999999997909
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCC--
Q ss_conf 99999961788887654334788975557-989999999970792467999999862399850122453157505568--
Q 000669 973 VDFVRSINLHTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFNQRTEMIKEFNRSNLWQKRGICRVPIVHEMFVK-- 1049 (1362)
Q Consensus 973 P~e~R~~Nl~~~g~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGia~a~~~~~~~~~-- 1049 (1362)
|+|||++|+.++++.. +++|+.+++ ++++||+++++.++|.+|+++. .+| ||+||++.+|+++++
T Consensus 384 P~e~R~~N~~~~~~~~----~~~g~~~~s~~~~~~l~~~~~~~~w~~r~~~~------~~g--rG~Gia~~~~~~g~~~~ 451 (769)
T 1rm6_A 384 SLKIRQINMLPQIPYV----TMYAQRVMSYGVPECLEKVKAASGWEERKGKL------PKG--RGLGIALSHFVSGTSTP 451 (769)
T ss_dssp HHHHHHHTBCSSSSEE----CTTCCEECCCCHHHHHHHHHHHHTHHHHTTCS------CTT--EEEEEEEEEEESSCSSC
T ss_pred HHHHHHHHCCCCCCCC----CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH------CCC--CEEEEEEEEEECCCCCC
T ss_conf 9999998378988776----88773216887999999998767925444430------368--24899989981356742
Q ss_pred -------CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf -------8748999947995999957755687755999999998719887898899999479981998876688778233
Q 000669 1050 -------SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDTLSLIQGGTTSGS 1122 (1362)
Q Consensus 1050 -------~~~a~v~i~~DGsv~v~~g~~e~GqG~~T~~~qiaA~~Lgi~~~~~~~~p~~~I~v~~~dT~~~p~~~~t~gS 1122 (1362)
.+.+.|+|++||+|+|.+|++|||||++|+++||||++||| |+++|+|..+||+.+|++++|+||
T Consensus 452 ~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~Lgi--------p~e~V~v~~~DT~~~p~~~~t~aS 523 (769)
T 1rm6_A 452 KHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGV--------RLSRIRVISADSALTPKDNGSYSS 523 (769)
T ss_dssp SSCCCCCSEEEEEEECTTCCEEEEECCCCSSSCHHHHHHHHHHHHHTC--------CGGGEEEEESBTTTSCCCCCSCTT
T ss_pred CCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC--------CHHHEEEECCCCCCCCCCCCCCCC
T ss_conf 245678875179999179839999888268988788999999999699--------878799966788878999997554
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC------------------CCCCCHHHHHHHHHHCCCEEEEEEEECC---
Q ss_conf 3100039999999999999999999886520------------------4977999999998514831589897538---
Q 000669 1123 TTSESSCEAVRLCCNVLVERLSALRGRLLER------------------MGSVNWETLIQQAHLQSVNLSASSLYVP--- 1181 (1362)
Q Consensus 1123 ~~t~~~g~Av~~Ac~~L~~rl~~~~~~l~~~------------------~~~~~w~~~~~~a~~~~~~l~a~~~~~~--- 1181 (1362)
|+|+++|+||++||++|++||.++++.++.. +..++|.+++..++..++.+...+.+..
T Consensus 524 r~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~~~~ 603 (769)
T 1rm6_A 524 RVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTE 603 (769)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTEEEETTCSSCCEEHHHHHHHHHTTTCSEEEEEEECCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCC
T ss_conf 17888999999999999999999888771798789587478799726987765899999764304655345542002454
Q ss_pred ---CC-------CCCCCEEEEEE---EEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHCCCEECC
Q ss_conf ---99-------98751006999---999954796999999999916987791202112020458667898601431279
Q 000669 1182 ---DS-------TSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYPTNS 1248 (1362)
Q Consensus 1182 ---~~-------~~~~~~~~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~aL~Ee~~~d~ 1248 (1362)
.+ .++.+++|+|+ ||||++||+++|+|+++++|||++|||.+++||||||++||||++|+||+.||+
T Consensus 604 ~~~~~~g~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d~ 683 (769)
T 1rm6_A 604 FQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDN 683 (769)
T ss_dssp GSCCTTCGGGGTTCCSCEEEEEEEEEEEECTTTCCEEEEEEEEEEECSSCSSHHHHHHHHHHHHHHHHHHHHTCCCCEET
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECC
T ss_conf 46666665446688787550899999999788866999999999989845899999999986899999888512168349
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 98533589999989998988972089993179998888887755899954133399999999999987101136788886
Q 000669 1249 DGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTWSDLDRSD 1328 (1362)
Q Consensus 1249 ~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~p~g~~gsKg~GE~~~~~~~av~~Ai~nAi~~A~~~~~~~~~~~g~~ 1328 (1362)
|+++|+||++|++|++.|+|+ |+|++++++ +|.+|||+||+||+++++ +++||+|||++|+|
T Consensus 684 -G~~~~~~~~dY~ip~~~D~P~-i~v~~ve~~-~~~~p~GaKGvGE~~~~~---~~~AIaNAv~~A~G------------ 745 (769)
T 1rm6_A 684 -GRMVHGNILDYRVPTIVESPD-IEVIIVESM-DPNGPFGAKEASEGMLAG---FLPAIHEAVYEAVG------------ 745 (769)
T ss_dssp -TEESCCSTTTSCCCCTTTCCE-EEEEEECCC-CTTSGGGCCCCSSTTTTT---HHHHHHHHHHHHHS------------
T ss_pred -CEECCCCHHHCCCCCCCCCCC-EEEEEEECC-CCCCCCCCCCCCCCCHHH---HHHHHHHHHHHHHC------------
T ss_conf -976889954356987133798-899998379-999998770255640314---89999999999759------------
Q ss_pred CEECCCCCCCHHHHHHHCCC
Q ss_conf 40214799996899997089
Q 000669 1329 ITFNLEVPATMPVVKELCGL 1348 (1362)
Q Consensus 1329 ~~~~~~~P~tpe~I~~a~~~ 1348 (1362)
.|++++|+|||+|+++|..
T Consensus 746 -~r~~~lP~tpe~v~~al~~ 764 (769)
T 1rm6_A 746 -VRATDFPLSPDRITELLDA 764 (769)
T ss_dssp -CCCCEESCCHHHHHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHHHH
T ss_conf -8746679899999999766
No 10
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=1.00 E-value=1 Score=1328.50 Aligned_cols=710 Identities=23% Similarity=0.261 Sum_probs=625.9
Q ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCC--CCC
Q ss_conf 889865555420312323212335788999579999764888919810147558799985999972898999877--565
Q 000669 585 PVGGPITKSGAALQASGEAVYVDDIPSPTNCLYGAFIYSTKPLARIKSIEFKSNSIPCGVIALLTFKDIPEGGEN--IGC 662 (1362)
Q Consensus 585 ~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~~~a~I~sID~s~A~~~pGVv~vit~~Dip~~g~n--~~~ 662 (1362)
.||++++|+|+..||||+++|++|+. +|||||+++||||++||+|++||+++|+++|||++|+|++|+| +.| .+.
T Consensus 13 ~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aharI~sID~s~A~~~pGV~~V~t~~D~p--~~~~~~~~ 89 (788)
T 1t3q_B 13 SIGTSVLRREDTRLLTGRGRYIADLV-LSGMLHVASLRSPFAHARIVSIDVADAQALPGVELVWCGADVA--ELSQGIVA 89 (788)
T ss_dssp STTSCCCCTTHHHHHTTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEHHHHH--TTCCCEEE
T ss_pred CCCCCCCCCCHHHHCCCCEECCCCCC-CCCCEEEEEEECCCCCEEEEEEEHHHHHHCCCEEEEEEHHHCC--CCCCCCCC
T ss_conf 68998768565874765113200058-9998899999569887799886858875089849998378775--54466675
Q ss_pred CCC---CCC--CCCCCCCCEEECCCEEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCC-CCCC-CCCC-
Q ss_conf 567---899--5445677201139838999968999999861547289803678997679998984279-7545-9984-
Q 000669 663 KSM---FGP--EPLFANELTRGAGQAVAFVVADTQKNANRAANLAVINYEMENLEPPILSVEEAVEQSS-LFEI-FPHW- 734 (1362)
Q Consensus 663 ~~~---~~~--~~~~a~~~V~y~GqpVa~VVA~t~~~A~~Aa~~V~V~y~~e~l~p~v~~~~~Al~~~a-~~~~-~~~~- 734 (1362)
... +.+ .++|++++|+|+|||||+|||+|+++|++|+++|+|+| |++ |+++++++|+++++ +|+. ++|+
T Consensus 90 ~~~~~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~i~~~~~~n~~ 166 (788)
T 1t3q_B 90 TMQVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAAQLIQVEY--EEL-PAVTGIEAALEGEARANDTLAGNVV 166 (788)
T ss_dssp CCSSTTCCCEEECSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CCCCSHHHHHHCSCCSCTTSSSSEE
T ss_pred CCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHCCCEEEE--EEC-CCCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 5554555677420046876898388289999899999999847774999--608-8769999984056710677777613
Q ss_pred --CCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEECC-CCCEEEEECCCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf --444458633331014611578899957504789799908999899-98199992998848999999988299996299
Q 000669 735 --YPKQVGDITKGMDEADQKILSAEIKLSSQYYFYMETQTALAVPDE-DNCMVVYSSTQCPENVHATISRCLGIPQHNVR 811 (1362)
Q Consensus 735 --~~~~~Gd~~~a~~~a~~vvve~~y~~~~q~H~~mEp~~a~A~~~~-dg~l~V~~stQ~p~~vq~~iA~~Lgip~~kV~ 811 (1362)
.....||++++|++|+++ +|++|++++|+|+||||++++|+|++ +|+|+||+|||+|+.+|..+|++||||++|||
T Consensus 167 ~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~Vr 245 (788)
T 1t3q_B 167 SRTSRARDELAPIFASSAGV-VRGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIE 245 (788)
T ss_dssp EEEEEEECCCHHHHHHSSEE-EEEEEEECBBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCCCCCCHHHHHCCCCCE-EEEEEEECCEECCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHEE
T ss_conf 30010267855664138819-99999989882337778659999978999799998987889999999998789858989
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCC
Q ss_conf 99744798889866764201100134532215999999999856998999917778886419999579999996588995
Q 000669 812 VITRRLGGGFGGKFLNPCLIHYRDIAYRVFKSVATACALAAYKLCRPVRIYVDRKTDMIMTGGRHPMKISYSVGFKSNGK 891 (1362)
Q Consensus 812 V~~~~vGGgFGgK~~~~~~~~~~~~~~~~~~~~a~~aAlaA~~~gRPVkl~~sRee~~~~~~~R~~~~~~~k~~~~~dG~ 891 (1362)
|+++++|||||+|..... .++.+|++|+++||||||+|||+|+|..+++||++.+++|+++|+||+
T Consensus 246 V~~~~vGGgFG~K~~~~~--------------~~~~aA~~A~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~ 311 (788)
T 1t3q_B 246 VRVPDVGGGFGQKAHLHP--------------EELLVCLLSRALGRPVRWIEDRQENFLGATHAKQQRNEMGLAFDGDGR 311 (788)
T ss_dssp EECCBCSCCTTTTSSCCH--------------HHHHHHHHHHHHTSCEEEECCHHHHHHHSCBBCCEEEEEEEEECTTCC
T ss_pred EEECCCCCCCCCCCCCCH--------------HHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCC
T ss_conf 994887888789876663--------------799999999983999899962799864258989769999999889993
Q ss_pred EEEEEEEEEECCCCCCC--CCC-HHH-HHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999833897999--875-156-77411688876782799999964599976655898836889899999999999
Q 000669 892 ITALQLNILIDAGMYPD--ISP-VMP-MIMLGTLKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQASFIAEAVIEHVAS 967 (1362)
Q Consensus 892 i~a~~~~~~~d~Ga~~~--~~~-~~~-~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~~a~Rg~G~~q~~fa~E~~idelA~ 967 (1362)
|+|++++++.|+|+|.+ ++. +.. ....++.++|++||++++++.|+||++|++||||||.+|++|++|++||++|+
T Consensus 312 i~a~~~~~~~d~Gay~~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~ 391 (788)
T 1t3q_B 312 FLALENRSITDGGAYNNLPWTQLVESHVGNAVILGVYKVPAVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAAR 391 (788)
T ss_dssp EEEEEEEEEEECCSSCCTTTCGGGTHHHHHHTTTTTBCCSEEEEEEEEECCSSSCBCCCTTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999973787765345621578899875277737775899999998899988764678678999999999999999
Q ss_pred HCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCH---HHHHHHHHHHHCCCCCEEEEEEEEEE
Q ss_conf 9399999999961788887654334788975557-9899999999707924---67999999862399850122453157
Q 000669 968 TLSMEVDFVRSINLHTRNSLNLFYESSAGEHAEY-TIPLMWDKLAVSSSFN---QRTEMIKEFNRSNLWQKRGICRVPIV 1043 (1362)
Q Consensus 968 ~lg~DP~e~R~~Nl~~~g~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~---~r~~~~~~~n~~~~~~krGia~a~~~ 1043 (1362)
+|||||+|||++|+.++++ +||.++.|+.+++ ++++||+++++.++|. +|+++.+ ..++| ||+|+++..
T Consensus 392 ~lG~DP~e~R~~N~~~~~~--~p~~~~~g~~~~s~~~~~~l~~~~~~~~w~~~~~r~~~~~---~~g~~--~G~GiA~~~ 464 (788)
T 1t3q_B 392 QLGLSPFEIRRRNVVMPED--FPFTNRLGQTHREGTYLQTINLLEEMVNPEAFRQRQAEAR---ARGKY--LGLGVSVFN 464 (788)
T ss_dssp HHTCCHHHHHHTTBCCGGG--CSEECTTSCEECSCCHHHHHHHHHHHHCHHHHHHHHHHHH---TTTEE--EEEEEEEEE
T ss_pred HHCCCHHHHHHHHCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH---CCCCE--EEEEEEEEE
T ss_conf 9790999999984678887--6644777753677789999999997669740445555441---26974--889999988
Q ss_pred EECCCC-------------CCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 505568-------------8748999947995999957755687755999999998719887898899999479981998
Q 000669 1044 HEMFVK-------------SSPGKVSILSDGSIVVEVGGIELGQGLWTKVKQMAAFALSSVQGGELGDLLDKVRVVQSDT 1110 (1362)
Q Consensus 1044 ~~~~~~-------------~~~a~v~i~~DGsv~v~~g~~e~GqG~~T~~~qiaA~~Lgi~~~~~~~~p~~~I~v~~~dT 1110 (1362)
++.+++ ...+.|+|++||+|+|.+|++|||||++|+++||||++||| |+|+|+|..+||
T Consensus 465 ~~~g~~~~~~~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------p~~~V~v~~~DT 536 (788)
T 1t3q_B 465 EVTGTGTRTLSFLGTPTTTHDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGV--------PASDVVIQAGST 536 (788)
T ss_dssp EEESCCHHHHHHTTCCCCCCBEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS--------CGGGEEEECSBT
T ss_pred ECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC--------CHHHEEEECCCC
T ss_conf 614567554554444567653079999269819999888578988778999999999799--------889899964789
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC------------------CCCCCHHHHHHHHHHCCC-
Q ss_conf 8766887782333100039999999999999999999886520------------------497799999999851483-
Q 000669 1111 LSLIQGGTTSGSTTSESSCEAVRLCCNVLVERLSALRGRLLER------------------MGSVNWETLIQQAHLQSV- 1171 (1362)
Q Consensus 1111 ~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rl~~~~~~l~~~------------------~~~~~w~~~~~~a~~~~~- 1171 (1362)
+ +|++++|+|||+|+++|+||++||++|++||.++++.++.. +..++|.+++..++....
T Consensus 537 ~-~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~el~~~~~~~~~~ 615 (788)
T 1t3q_B 537 K-NTYGFGAYASRGAVIGAGSIGRAASIVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFADAT 615 (788)
T ss_dssp T-SCCBCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEETTEEEETTEEEEEEEHHHHHHHHHHCGGG
T ss_pred C-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCEEEECCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 9-999998755527888999999999999999999767661898899799689999826988763699999987525765
Q ss_pred -------EEEEEEEECCCCCCCCCEEEEEE---EEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHH
Q ss_conf -------15898975389998751006999---99995479699999999991698779120211202045866789860
Q 000669 1172 -------NLSASSLYVPDSTSIHYLNYGAA---VEVNLLTGETTILRADIIYDCGQSLNPAVDLGQIEGAFVQGIGFFML 1241 (1362)
Q Consensus 1172 -------~l~a~~~~~~~~~~~~~~~~~a~---VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~~GlG~aL~ 1241 (1362)
.+....+|.+. +.+++|+|+ ||||++||+++|+|+++++|||++|||.+++||||||++||||++|+
T Consensus 616 l~~~~~~~~~~~~~~~~~---~~~~~~ga~~aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~ 692 (788)
T 1t3q_B 616 HPPGFDATLEATATYDPS---DLVLANGGHAAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLL 692 (788)
T ss_dssp CCTTCCCCCEEEEECCCS---SCEEEEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCC---CCCCCEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 556766775643245888---78744088999999977876599999999998984589999899988769888888741
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 14312799853358999998999898897208999317999888888775589995413339999999999998710113
Q 000669 1242 EEYPTNSDGLVVSEGTWTYKIPTIDTIPKQFNVEILNSGHHQKRVLSSKASGEPPLLLAVSVHCATRAAIREARKQLLTW 1321 (1362)
Q Consensus 1242 Ee~~~d~~G~~~~~~~~~Y~iP~~~diP~~~~v~~~~~~~~p~g~~gsKg~GE~~~~~~~av~~Ai~nAi~~A~~~~~~~ 1321 (1362)
||+.||++|+++|+||++|++|++.|+|+ |+|++++++ +|.+|||+||+||+++++ +++||+|||++|+.+.
T Consensus 693 Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~-i~v~~ve~~-~~~~p~GaKGvGE~~~~~---~a~AiaNAI~~A~~~~--- 764 (788)
T 1t3q_B 693 EEVIYDDFGQLVTTTLMDYLIPTTLDVPD-IRIRHLETP-SPLVPGGIKGMGESAMIS---APAAVVAAVNDALAHL--- 764 (788)
T ss_dssp CCBCBCTTSCBCCCSTTTSCCCCTTTCCC-EEEEECCCC-CTTSGGGBCCCTTHHHHH---HHHHHHHHHHHHHGGG---
T ss_pred CEEEECCCCCCCCCCHHHCCCCCCCCCCC-EEEEEEECC-CCCCCCCCCCCCCCCHHH---HHHHHHHHHHHHHHHC---
T ss_conf 12588899977789953256998343798-899998279-999998772156540100---7999999999998726---
Q ss_pred CCCCCCCCEECCCCCCCHHHHHHHCCCC
Q ss_conf 6788886402147999968999970899
Q 000669 1322 SDLDRSDITFNLEVPATMPVVKELCGLD 1349 (1362)
Q Consensus 1322 ~~~~g~~~~~~~~~P~tpe~I~~a~~~~ 1349 (1362)
| .+++++|+|||+|+++|...
T Consensus 765 ----G---~r~~~lP~tpe~v~~al~~~ 785 (788)
T 1t3q_B 765 ----E---VVIETVPITPERIFRSIQER 785 (788)
T ss_dssp ----T---CCCCEESCCHHHHHHHHHTC
T ss_pred ----C---CCCCCCCCCHHHHHHHHHHC
T ss_conf ----9---96356898999999987644
Done!