Query 000671
Match_columns 1361
No_of_seqs 474 out of 5059
Neff 7.6
Searched_HMMs 29240
Date Tue Mar 26 15:54:14 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000671.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_445-449//hhsearch_pdb/000671hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1348.4 100.8 1117 217-1345 1-1219(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1067.2 98.2 996 327-1330 117-1149(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 630.5 58.2 530 289-819 761-1316(1321)
4 4a82_A Cystic fibrosis transme 1.0 1 1 625.9 63.8 545 270-817 7-574 (578)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 615.6 62.0 543 272-820 32-591 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 614.2 68.9 546 268-819 14-578 (587)
7 3b60_A Lipid A export ATP-bind 1.0 1 1 588.8 69.5 541 271-819 19-579 (582)
8 3b5x_A Lipid A export ATP-bind 1.0 1 1 587.2 75.0 541 271-819 19-579 (582)
9 2yl4_A ATP-binding cassette SU 1.0 1 1 586.4 68.2 544 271-818 13-582 (595)
10 3g5u_A MCG1178, multidrug resi 1.0 1 1 537.2 56.8 542 275-820 703-1271(1284)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1348.36 Aligned_cols=1117 Identities=19% Similarity=0.215 Sum_probs=811.5
Q ss_pred HHHHHC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC---------CCCCCCHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 998141-6998889999999438289999999999999987202---------799983089999999-66879999999
Q 000671 217 LLSLGY-SKPLALEDIPSLVPEDEASFAYQKFAYAWDSLVRENN---------SNNNGNLVRKVITNV-YLKENIFIAIC 285 (1361)
Q Consensus 217 l~~~g~-~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~---------~~~~~~~l~~~l~~~-~~~~~~~~~~~ 285 (1361)
+++.|. |++|+..|.+.+.++|..+...+.+++.|....++.. +...++.-++.|++. -+.++++..+.
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf 98773100687635445679501110000113454243554334310012232025687799997315676789999999
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHCC-------CC--------CC----CHHHH----HHHHHHHHHHHHHHHH-HHHHH
Q ss_conf 999999999999999---99998413-------89--------72----34789----9999999999999999-99999
Q 000671 286 ALLRTIAVVVGPLLL---YAFVNYSN-------RG--------EE----NLQEG----LSIVGCLIITKVVESF-TQRHC 338 (1361)
Q Consensus 286 ~l~~~~~~~~~P~ll---~~li~~~~-------~~--------~~----~~~~g----~~~~~~l~~~~~~~~~-~~~~~ 338 (1361)
.++..+.+.+.|++. ..+++.+. .. .. ..... .++.++++++.++.++ ....+
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999985499456788997899999996899994088-7988999999999999999999997
Q 000671 339 FFGSRRSGMRMRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFP-FWFHLTWSLALQLFLAIGVLFGVVG 417 (1361)
Q Consensus 339 ~~~~~~~g~rir~~l~~~Iy~K~L~ls~~~~~~~s~G~ivNlms~D~~ri~~~~-~~~~~~w~~plqi~ial~~L~~~lG 417 (1361)
.+.+.|+..+ +...+|+|.++++..-.++.++|+++|.++.|++++.++. ..+..++..++.++.++++++..-.
T Consensus 161 ~~~~~r~~~~----lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~ 236 (1321)
T 4f4c_A 161 LYVAEQMNNR----LRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSW 236 (1321)
T ss_dssp HHHHHHHHHH----HHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHH----HHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999----999999999788989987998489999999999999999999999999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999998999999999999999999999999999994299999824499999999999999999999999
Q 000671 418 LGALPGLVLFLICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSEAQ 497 (1361)
Q Consensus 418 ~~~l~gl~v~~i~~~l~~~~~~~~~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~i~~~R~~El~~l~~~~ 497 (1361)
..+++.++++.+...+...+++...+.+++.++..+++.+.++|.++|||+||+|+||+.+.++..+..++..+...+..
T Consensus 237 ~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 316 (1321)
T 4f4c_A 237 QLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKG 316 (1321)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998399999821429999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999989999-9999999999985798778889999999999989999999999999999999999999984356
Q 000671 498 LRKAYGTVIYWMSPT-IISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDH 576 (1361)
Q Consensus 498 ~~~~~~~~~~~~~p~-lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~ 576 (1361)
...+........... ...++.+.+..++..+.++++.+|+.+.++..+..|+..++..+..+.++.+|.+||.+||+.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 396 (1321)
T 4f4c_A 317 LFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRK 396 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999959986999999999999999999989999999999999999999997178
Q ss_pred CC-CCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 78-97000100235899848998337972799998732211488518808999588998977899998299658871899
Q 000671 577 EL-NNDDVRRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVN 655 (1361)
Q Consensus 577 e~-~~~~~~~~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilge~~~~~G~v~ 655 (1361)
+. ++.........+..+.|+++|++|+|+..++.++|+|+||++++|++++||||+|||||||+++|+|++++.+|+|.
T Consensus 397 ~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G~I~ 476 (1321)
T 4f4c_A 397 PVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKIT 476 (1321)
T ss_dssp CCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCC
T ss_conf 53456665565677888767999855407999987433331886228827899805898577888875456516448615
Q ss_pred ECC-------------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 929-------------3999925776898888899623999-99899999999823168882199999741368988779
Q 000671 656 LYG-------------SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLS 721 (1361)
Q Consensus 656 ~~g-------------~iayv~Q~pwi~~~TireNIlfg~~-~d~~~y~~vi~~c~L~~dl~~lp~GD~T~IGe~G~~LS 721 (1361)
++| ++|||+|+||++|+||||||+||+| .+++++.++++.|++++|++.||+||+|+|||+|.+||
T Consensus 477 idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LS 556 (1321)
T 4f4c_A 477 IDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLS 556 (1321)
T ss_dssp ETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCC
T ss_pred CCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCC
T ss_conf 79965011259998504666587533207861678864155220999999998756546887088888607558988777
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 58999999999980499899982888896999999999999978159958999826702784259599993985879518
Q 000671 722 GGQKQRIQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGN 801 (1361)
Q Consensus 722 GGQkqRi~LARA~y~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kT~ilvth~~~~l~~~d~I~vl~~G~I~~~Gt 801 (1361)
|||||||+||||+|++|+|++|||||||||+++++ ++++++.+.+++||+|+|||++++++.||+|++|++|+|+|+|+
T Consensus 557 GGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~-~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gt 635 (1321)
T 4f4c_A 557 GGQKQRIAIARALVRNPKILLLDEATSALDAESEG-IVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGD 635 (1321)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHH-HHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH-HHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECCCC
T ss_conf 77879999999872599989984554468878999-99999999847988999736387898689899963996513689
Q ss_pred HHHHHHCCCHHHHHHHHHHHHCCC----CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-
Q ss_conf 689985183389999973210027----899988888984211135-67889999998887778643100015676636-
Q 000671 802 YQELLLAGTAFEQLVNAHRDAITG----LGPLDNAGQGGAEKVEKG-RTARPEEPNGIYPRKESSEGEISVKGLTQLTE- 875 (1361)
Q Consensus 802 ~~el~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 875 (1361)
|+||+++++.|+++.+.+...... ............+..+.. ......+..........+.. .........+
T Consensus 636 h~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 713 (1321)
T 4f4c_A 636 HRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTI--GSITNGPVIDE 713 (1321)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHCC--------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC--CCCCCCCCHHH
T ss_conf 9999985327999999622122223323344332232111222223422222221102211101321--24567740257
Q ss_pred --------------HHHHHHCCCCHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCC---CC
Q ss_conf --------------88876076038999999986022-35899999999999999997999999872----1788---76
Q 000671 876 --------------DEEMEIGDVGWKPFMDYLNVSKG-MSLLCLGVLAQSGFVGLQAAATYWLAYAI----QIPK---IT 933 (1361)
Q Consensus 876 --------------~e~~~~g~v~~~~y~~y~~~~~g-~~~~~l~~~~~~~~~~~~~~~~~wl~~~~----~~~~---~~ 933 (1361)
++.++.|..++..+..|.. .++ +..+++.+++..+.........+|+..|. ..+. ..
T Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1321)
T 4f4c_A 714 KEERIGKDALSRLKQELEENNAQKTNLFEILYH-ARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQ 792 (1321)
T ss_dssp --CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHH-TGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTT
T ss_pred HHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 775315403899999999707863109999999-8778999999999999999999999999999998751793455667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 1489999999999999999999999999999999999999999976398755333--58238999983079899834299
Q 000671 934 SGILIGVYAGVSTASAVFVYFRSFFAAHLGLKASKAFFSGFTNSIFKAPMLFFDS--TPVGRILTRLSSDLSILDFDIPF 1011 (1361)
Q Consensus 934 ~~~~l~iy~~l~~~~~i~~~~~~~~~~~~~~~as~~l~~~l~~~ilr~p~sfFd~--tp~GrIlnRfs~Di~~iD~~l~~ 1011 (1361)
..+|..+|++++++..++.+++.++....+.++++++|.+++++++++|++|||+ +|+|+|+|||++|++.+|..++.
T Consensus 793 ~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~ 872 (1321)
T 4f4c_A 793 GHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDF 872 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHH
T ss_conf 89999999999999999999999999999999999999999888734993332167888488885025059999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCC
Q ss_conf 99999999999999999999886999999999999999999999997899999980604618899999761538888424
Q 000671 1012 SIVFVAASGTELLAIIGIMTFVTWQVLVVAIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFN 1091 (1361)
Q Consensus 1012 ~l~~~~~~~~~~i~~i~v~~~~~~~~~~v~i~l~~~~~~i~~~y~~~sr~l~rl~~~~~spi~~~~~Etl~Gl~tIRAf~ 1091 (1361)
.+..++..++.+++.++++++.+|++.++++++++++++...++.+..+...+......++...++.|+++|++|||+|+
T Consensus 873 ~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~ 952 (1321)
T 4f4c_A 873 RFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALA 952 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999998653777702213786899999999888999999999999999999999998889889999996279888614
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCC--CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 189999999999988866799999998899999999999999999987-6520588--5477799999999999999999
Q 000671 1092 MVDRFFQNYLKLVDIDASLFFHTNGVMEWLILRVEALQNLTLFTAALF-LVLIPRG--YVAPGLVGLSLSYAFTLTGTQV 1168 (1361)
Q Consensus 1092 ~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~i~~~~~~~~~l~-~~~~~~g--~is~g~~gl~l~ya~~l~~~l~ 1168 (1361)
+|+++.+++.+..|...+..+.....+.+.......+..+....+.++ +.++..+ .++++.+...+.+......++.
T Consensus 953 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1032 (1321)
T 4f4c_A 953 REDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLG 1032 (1321)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 14889999999999999999999999999999999999999999998757887537654214789999999987788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCCCCCEEEEECCCEEE
Q ss_conf 9999999999886699999994449999998777899999999754199998999848999-984225128860896999
Q 000671 1169 FLSRWYCYLANYIISVERIKQFMHIPPEPPAIVEDKRPPSSWPFKGRIELRQLKIRYRPNA-PLVLKGITCTFSEGTRVG 1247 (1361)
Q Consensus 1169 ~lv~~~~~le~~~~sveRI~ey~~~~~E~~~~~~~~~~~~~wp~~G~Ief~nVs~~Y~~~~-~~VLk~isl~I~~GekVg 1247 (1361)
++.+.+.++++.+.+++|+.++++.++|.+ +...+++.||..|+|+|+||+|+|+++. .+||||+||+|+||||||
T Consensus 1033 ~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~va 1109 (1321)
T 4f4c_A 1033 FATSYFPEYAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLA 1109 (1321)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEE
T ss_conf 999999999999999998999860766577---76677878888881899987985799998821245169988989999
Q ss_pred EECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCCEECCCCCCCCCCHHHHC----CCCCCCCHHHHH
Q ss_conf 9869998589999888214579996799969638999947885119143476533345405415----999999999999
Q 000671 1248 VVGRTGSGKTTLISALFRLVEPAGGSILIDGVDICSMGLKDLRVKLSIIPQEPTLFRGSVRTNL----DPLGLYSDDEIW 1323 (1361)
Q Consensus 1248 IVGrTGSGKSTL~~~L~Rl~e~~~G~I~IDGvDI~~i~l~~LR~~isiIpQdp~LF~GTIR~NL----dP~~~~sDeeI~ 1323 (1361)
||||||||||||+++|+|||||++|+|+|||+||+++++++||++|++|||||+||+||||+|| || .+++|+|||
T Consensus 1110 IVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~-~~~sd~ei~ 1188 (1321)
T 4f4c_A 1110 LVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDP-SSVTMAQVE 1188 (1321)
T ss_dssp EECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCT-TTSCHHHHH
T ss_pred EECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCC-CCCCHHHHH
T ss_conf 9899998199999999568638997899999986549999998545998789973272399997454999-999999999
Q ss_pred HHHHHCC---------CCCCCCCCCCCCCCH
Q ss_conf 9996276---------878987444567702
Q 000671 1324 KVSQLTP---------NSRNSRIDIDFPTFN 1345 (1361)
Q Consensus 1324 ~AL~~~~---------~~~~~~~~~~~~~~~ 1345 (1361)
+||+.++ ++.++.++++--.||
T Consensus 1189 ~Al~~a~l~~~I~~Lp~GldT~vge~G~~LS 1219 (1321)
T 4f4c_A 1189 EAARLANIHNFIAELPEGFETRVGDRGTQLS 1219 (1321)
T ss_dssp HHHHHTTCHHHHHTSTTTTCSEETTTSCSSC
T ss_pred HHHHHHCCHHHHHCCCCCCCCEECCCCCCCC
T ss_conf 9999829849997176789998238891569
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1067.21 Aligned_cols=996 Identities=18% Similarity=0.186 Sum_probs=710.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999999854994567889978999999968999940887-988999999999
Q 000671 327 TKVVESFTQRHCFFGSRRSGMRMRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFPF-WFHLTWSLALQL 405 (1361)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~g~rir~~l~~~Iy~K~L~ls~~~~~~~s~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi 405 (1361)
..++..++.....+...+.+.++-..+...+|+|.++++..-.++.++|+++|.++.|++.+.+... .+..+....+.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~ 196 (1284)
T 3g5u_A 117 IGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATF 196 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999869989975688778999999889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 99999999999789999999999999998999999999999999999999999999994299999824499999999999
Q 000671 406 FLAIGVLFGVVGLGALPGLVLFLICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESR 485 (1361)
Q Consensus 406 ~ial~~L~~~lG~~~l~gl~v~~i~~~l~~~~~~~~~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~i~~~ 485 (1361)
+.++++++..-...+++.++++.+...+...+.+...+..++..+..++..+...|.++||++||.|++|+.+.++..+.
T Consensus 197 i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~ 276 (1284)
T 3g5u_A 197 FGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNN 276 (1284)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999999998999999999999999999999999999999999999999999999997879999846539999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999-99899999999999999985798778889999999999989999999999999999999
Q 000671 486 REKEFKWLSEAQLRKAYGTV-IYWMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKV 564 (1361)
Q Consensus 486 R~~El~~l~~~~~~~~~~~~-~~~~~p~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~l~~pl~~lp~~i~~~~~a~v 564 (1361)
.++-.+...+.....+.... .....-....++.+.+..++..+.++++.+++.+..+.....|+..+...+..+.++..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (1284)
T 3g5u_A 277 LEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARG 356 (1284)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999929988999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCC-CCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHH
Q ss_conf 9999999843567-897000100235899848998337972799998732211488518808999588998977899998
Q 000671 565 SFDRINAFLLDHE-LNNDDVRRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAI 643 (1361)
Q Consensus 565 S~~RI~~fL~~~e-~~~~~~~~~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~i 643 (1361)
+.+|+.++++.++ .++........++..+.|+++|++|+|+.+++.++|+|+||++++|+.++|+|++|||||||+++|
T Consensus 357 a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll 436 (1284)
T 3g5u_A 357 AAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLM 436 (1284)
T ss_dssp HHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHH
T ss_conf 99999999728986776665677777777718999989976999987101254589759988999899999799999998
Q ss_pred HCCCCCCCCEEEECC-------------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCC
Q ss_conf 299658871899929-------------3999925776898888899623999-99899999999823168882199999
Q 000671 644 LGEIPKISGTVNLYG-------------SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFDHGD 709 (1361)
Q Consensus 644 lge~~~~~G~v~~~g-------------~iayv~Q~pwi~~~TireNIlfg~~-~d~~~y~~vi~~c~L~~dl~~lp~GD 709 (1361)
+|++++.+|+|.++| +++||+|+||++++||+|||.||.+ .+++++.++++.|++.++++.+|+|+
T Consensus 437 ~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~ 516 (1284)
T 3g5u_A 437 QRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQF 516 (1284)
T ss_dssp TTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGG
T ss_pred HCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCC
T ss_conf 07889997389999998775799999865489868875377669999745798999999999999829699997465633
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEE
Q ss_conf 74136898877958999999999980499899982888896999999999999978159958999826702784259599
Q 000671 710 LTEIGQRGLNLSGGQKQRIQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRIL 789 (1361)
Q Consensus 710 ~T~IGe~G~~LSGGQkqRi~LARA~y~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kT~ilvth~~~~l~~~d~I~ 789 (1361)
+|.+||+|.+||||||||++||||++++|+|++||||+|+||+++++.+. +++....+++|+|++||+++.+..||+|+
T Consensus 517 ~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~i~~~d~i~ 595 (1284)
T 3g5u_A 517 DTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQ-AALDKAREGRTTIVIAHRLSTVRNADVIA 595 (1284)
T ss_dssp GCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHH-HHHHHHHTTSEEEEECSCHHHHTTCSEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEE
T ss_conf 45014787865999999999999995299989997987777999999999-99999739998999940778997499899
Q ss_pred EEECCEEEEECCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCC
Q ss_conf 993985879518689985183389999973210027899988888984211135678899999988877786431--000
Q 000671 790 VLEGGQITQSGNYQELLLAGTAFEQLVNAHRDAITGLGPLDNAGQGGAEKVEKGRTARPEEPNGIYPRKESSEGE--ISV 867 (1361)
Q Consensus 790 vl~~G~I~~~Gt~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 867 (1361)
+|++|+|++.|+|+|+++.++.|.++...+.......... ......++..... ................... ...
T Consensus 596 vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1284)
T 3g5u_A 596 GFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGN--EACKSKDEIDNLD-MSSKDSGSSLIRRRSTRKSICGPH 672 (1284)
T ss_dssp ECSSSCCCCEECHHHHHHTTSHHHHHHHHTC-------------------------------------------------
T ss_pred EEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9989999997889999867877999999743002211133--3333222223443-333333320003454333445642
Q ss_pred CCCCCCCHHHHH--HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCC-----CHHH
Q ss_conf 156766368887--607603899999998602235899999999999999997999----99987217887-----6148
Q 000671 868 KGLTQLTEDEEM--EIGDVGWKPFMDYLNVSKGMSLLCLGVLAQSGFVGLQAAATY----WLAYAIQIPKI-----TSGI 936 (1361)
Q Consensus 868 ~~~~~~~~~e~~--~~g~v~~~~y~~y~~~~~g~~~~~l~~~~~~~~~~~~~~~~~----wl~~~~~~~~~-----~~~~ 936 (1361)
........+|+. ......+..+++|.+.......+. +++.++..+......+ ++..+...... ....
T Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 750 (1284)
T 3g5u_A 673 DQDRKLSTKEALDEDVPPASFWRILKLNSTEWPYFVVG--IFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNL 750 (1284)
T ss_dssp -----------CCCCCSCCCTTHHHHHHHHTCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHH
T ss_pred CCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 23321102455531366258999999845157999999--9999999999999999999999998556850336779999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999999997639875533--358238999983079899834299999
Q 000671 937 LIGVYAGVSTASAVFVYFRSFFAAHLGLKASKAFFSGFTNSIFKAPMLFFD--STPVGRILTRLSSDLSILDFDIPFSIV 1014 (1361)
Q Consensus 937 ~l~iy~~l~~~~~i~~~~~~~~~~~~~~~as~~l~~~l~~~ilr~p~sfFd--~tp~GrIlnRfs~Di~~iD~~l~~~l~ 1014 (1361)
+..+|++++++..++.+++.+.+...+.+..+++|.+++++++++|++||| .+|+|+++||+++|++.++..++..+.
T Consensus 751 ~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~ 830 (1284)
T 3g5u_A 751 FSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLA 830 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999983998887578998899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCHH
Q ss_conf 99999999999999999886999999999999999999999997899999980604618899999761538888424189
Q 000671 1015 FVAASGTELLAIIGIMTFVTWQVLVVAIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFNMVD 1094 (1361)
Q Consensus 1015 ~~~~~~~~~i~~i~v~~~~~~~~~~v~i~l~~~~~~i~~~y~~~sr~l~rl~~~~~spi~~~~~Etl~Gl~tIRAf~~e~ 1094 (1361)
.++..++.+++.+++++..+|.+.++++..+++...+...+.+..+...+......+....++.|+++|+++||+|++|+
T Consensus 831 ~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~ 910 (1284)
T 3g5u_A 831 VIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQ 910 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 99999999999999999996999999999999999999999999999999999999999999999998899999846599
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998886679999999889999999999999999998-76520588547779999999999999999999999
Q 000671 1095 RFFQNYLKLVDIDASLFFHTNGVMEWLILRVEALQNLTLFTAAL-FLVLIPRGYVAPGLVGLSLSYAFTLTGTQVFLSRW 1173 (1361)
Q Consensus 1095 ~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~i~~~~~~~~~l-~~~~~~~g~is~g~~gl~l~ya~~l~~~l~~lv~~ 1173 (1361)
++.+++.+..+...+..........+.......+..+....+.. .+.++..+.++.|.+..++.+......++..+...
T Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1284)
T 3g5u_A 911 KFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSF 990 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999909806999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCCCCCEEEEECCCEEEEECCC
Q ss_conf 9999988669999999444999999877789999999975419999899984899-998422512886089699998699
Q 000671 1174 YCYLANYIISVERIKQFMHIPPEPPAIVEDKRPPSSWPFKGRIELRQLKIRYRPN-APLVLKGITCTFSEGTRVGVVGRT 1252 (1361)
Q Consensus 1174 ~~~le~~~~sveRI~ey~~~~~E~~~~~~~~~~~~~wp~~G~Ief~nVs~~Y~~~-~~~VLk~isl~I~~GekVgIVGrT 1252 (1361)
+.+++....+++|+.++++.++|.+...+ .+.+.|+.+|.|+|+||+|+|+.. ..++|+|+||+|++||++||||+|
T Consensus 991 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~s 1068 (1284)
T 3g5u_A 991 APDYAKATVSASHIIRIIEKTPEIDSYST--QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSS 1068 (1284)
T ss_dssp SCCSTHHHHHHHHHHHHHHSCCSSSSCCS--SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCC
T ss_conf 99999999999999999838876666555--6654567778579999899779999870020305997699889998899
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCCEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHHHHHC
Q ss_conf 98589999888214579996799969638999947885119143476533345405415999---999999999999627
Q 000671 1253 GSGKTTLISALFRLVEPAGGSILIDGVDICSMGLKDLRVKLSIIPQEPTLFRGSVRTNLDPL---GLYSDDEIWKVSQLT 1329 (1361)
Q Consensus 1253 GSGKSTL~~~L~Rl~e~~~G~I~IDGvDI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdP~---~~~sDeeI~~AL~~~ 1329 (1361)
|||||||+++|+|+++|++|+|.+||+||++++++++|+++++|||||.+|+||||+||.+. ...+|+++|++++.+
T Consensus 1069 GsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~ 1148 (1284)
T 3g5u_A 1069 GCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEA 1148 (1284)
T ss_dssp STTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 99789999999468678997798999980007899997026898778740666699997466877899999999999983
Q ss_pred C
Q ss_conf 6
Q 000671 1330 P 1330 (1361)
Q Consensus 1330 ~ 1330 (1361)
+
T Consensus 1149 ~ 1149 (1284)
T 3g5u_A 1149 N 1149 (1284)
T ss_dssp T
T ss_pred C
T ss_conf 9
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=630.49 Aligned_cols=530 Identities=19% Similarity=0.216 Sum_probs=385.9
Q ss_pred HHHHHHHHH---HHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999---99999998413-89723478999999999999999999999999999999999999999999998549
Q 000671 289 RTIAVVVGP---LLLYAFVNYSN-RGEENLQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMRMRSALMVAVYQKQLKL 364 (1361)
Q Consensus 289 ~~~~~~~~P---~ll~~li~~~~-~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~l~~~Iy~K~L~l 364 (1361)
..+..++.| +++...++... ++......+..|+..+++..++..++.....+...+.+.++-..+...+|+|.++.
T Consensus 761 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~ 840 (1321)
T 4f4c_A 761 ATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQ 840 (1321)
T ss_dssp HHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999998751793455667899999999999999999999999999999999999999998887349
Q ss_pred CCCCCC--CCCHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 945678--89978999999968999940887-988999999999999999999997899999999999999989999999
Q 000671 365 SSLGRK--KHSTGEIVNYIAVDAYRMGEFPF-WFHLTWSLALQLFLAIGVLFGVVGLGALPGLVLFLICGLLNVPFAKIL 441 (1361)
Q Consensus 365 s~~~~~--~~s~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~ial~~L~~~lG~~~l~gl~v~~i~~~l~~~~~~~~ 441 (1361)
+-.-.+ ++++|+++|.++.|++.+.+... .+..+....+.++.++++++..-.+.++..++++.+.........+..
T Consensus 841 ~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~ 920 (1321)
T 4f4c_A 841 HIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRF 920 (1321)
T ss_dssp CSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 93332167888488885025059999999999999999986537777022137868999999998889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q ss_conf 9999999999999999999999429999982449999999999999999999999999999999998999-999999999
Q 000671 442 QKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSEAQLRKAYGTVIYWMSP-TIISSVIFL 520 (1361)
Q Consensus 442 ~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~i~~~R~~El~~l~~~~~~~~~~~~~~~~~p-~lv~~~~f~ 520 (1361)
.+.+.+..+...+......|.++|+++||.|++|+.|.++..+.-+...+...+.....+.......... ....++.+.
T Consensus 921 ~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1321)
T 4f4c_A 921 TGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRM 1000 (1321)
T ss_dssp SSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998889889999996279888614148899999999999999999999999999999999999999999987
Q ss_pred HHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEE
Q ss_conf 999857--987788899999999999899999999999999999999999999843567897000100235899848998
Q 000671 521 GCALTG--SAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNNDDVRRISLQKSDRSVKIQ 598 (1361)
Q Consensus 521 ~~~l~~--~~~Lt~~~vFt~l~lf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~~~ 598 (1361)
+..++. ...+.+..+|..+..+.....|+..+......+.++..+.+|+.++++.++..++.....+..+..+.|+++
T Consensus 1001 g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~g~I~f~ 1080 (1321)
T 4f4c_A 1001 GLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLAGEKKKLYGKVIFK 1080 (1321)
T ss_dssp HHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCCCSBCCCCCCCEEEE
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 57887537654214789999999987788999999999999999999998999860766577766778788888818999
Q ss_pred EEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-------------EEEEEEC
Q ss_conf 337972799998732211488518808999588998977899998299658871899929-------------3999925
Q 000671 599 EGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG-------------SIAYVSQ 665 (1361)
Q Consensus 599 ~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilge~~~~~G~v~~~g-------------~iayv~Q 665 (1361)
|++|+|+.+++.++|+|+||+|++||.++|||++|||||||+++|+|.++|.+|+|.++| +++||||
T Consensus 1081 nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Q 1160 (1321)
T 4f4c_A 1081 NVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQ 1160 (1321)
T ss_dssp EEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECS
T ss_pred EEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECC
T ss_conf 87985799998821245169988989999989999819999999956863899789999998654999999854599878
Q ss_pred CCCCCCCCHHHHHHCCC---CCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 77689888889962399---999899999999823168882199999741368988779589999999999804998999
Q 000671 666 TSWIQSGSIRDNILYGK---PMDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQRIQLARAVYNDADIYL 742 (1361)
Q Consensus 666 ~pwi~~~TireNIlfg~---~~d~~~y~~vi~~c~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqRi~LARA~y~~~~i~l 742 (1361)
+|.+|+|||||||.||. ..++++..++++.|+++++++.||+|.+|.|||+|.|||||||||+|||||++++|+|++
T Consensus 1161 dp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILi 1240 (1321)
T 4f4c_A 1161 EPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILL 1240 (1321)
T ss_dssp SCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEE
T ss_pred CCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEE
T ss_conf 99732723999974549999999999999999829849997176789998238891569999999999999971799899
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHH
Q ss_conf 82888896999999999999978159958999826702784259599993985879518689985183389999973
Q 000671 743 FDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLLAGTAFEQLVNAH 819 (1361)
Q Consensus 743 LDdp~salD~~~~~~i~~~~i~~~l~~kT~ilvth~~~~l~~~d~I~vl~~G~I~~~Gt~~el~~~~~~~~~l~~~~ 819 (1361)
||||+||||+++++.|. +.+....++||+|+|+|+++.+..||+|+||++|+|+|.|+|+||+++++.|.++++.+
T Consensus 1241 LDEaTSaLD~~tE~~Iq-~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~g~y~~L~~~Q 1316 (1321)
T 4f4c_A 1241 LDEATSALDTESEKVVQ-EALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEKGAYYKLTQKQ 1316 (1321)
T ss_dssp EESCCCSTTSHHHHHHH-HHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC----------
T ss_pred EECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHH
T ss_conf 96811157899999999-99999739998999606899999699999998989999888899984980999999999
No 4
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=625.93 Aligned_cols=545 Identities=21% Similarity=0.284 Sum_probs=443.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-C-HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999966879999999999999999999999999984138972-3-47----8999999999999999999999999999
Q 000671 270 VITNVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEE-N-LQ----EGLSIVGCLIITKVVESFTQRHCFFGSR 343 (1361)
Q Consensus 270 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~-~-~~----~g~~~~~~l~~~~~~~~~~~~~~~~~~~ 343 (1361)
.+.+.+++.++...++.++..++..+.|+++..+++....... . .. ..+.++.++++..++..++.....+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (578)
T 4a82_A 7 QFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQ 86 (578)
T ss_dssp HHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99889999999999999999999999999999999999816871146778888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999854994567889978999999968999940887-98899999999999999999999789999
Q 000671 344 RSGMRMRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFPF-WFHLTWSLALQLFLAIGVLFGVVGLGALP 422 (1361)
Q Consensus 344 ~~g~rir~~l~~~Iy~K~L~ls~~~~~~~s~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~ial~~L~~~lG~~~l~ 422 (1361)
+.+.++...+...+|+|.++++....++.++|+++|.++.|++++.++.. .++.+|..++.+++++++++..-++.+++
T Consensus 87 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 166 (578)
T 4a82_A 87 WTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLA 166 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999987899997689869999999999999999999999999999999999999999996999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999899999999999999999999999999999429999982449999999999999999999999999999
Q 000671 423 GLVLFLICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSEAQLRKAY 502 (1361)
Q Consensus 423 gl~v~~i~~~l~~~~~~~~~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~i~~~R~~El~~l~~~~~~~~~ 502 (1361)
.++++.+...+...+.++..+.+++.++..+++.+.++|.++|||+||.|+||+.+.++..+.++++.+...+.....+.
T Consensus 167 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (578)
T 4a82_A 167 ALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAY 246 (578)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998249999981664999999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999899999--9999999999857987788899999999999899999999999999999999999999843567897
Q 000671 503 GTVIYWMSPTI--ISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNN 580 (1361)
Q Consensus 503 ~~~~~~~~p~l--v~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~ 580 (1361)
..........+ +.+..++++.... +.++++.+++.+.++..+..|+..++..+..+.++.+|.+|+.++++.++..+
T Consensus 247 ~~~~~~~~~~~~~~~v~~~g~~~v~~-g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 325 (578)
T 4a82_A 247 SFAAINTVTDIGPIIVIGVGAYLAIS-GSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIK 325 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-TSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999985-99589999999999999999999999999999999999999999976897666
Q ss_pred CHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC--
Q ss_conf 000100235899848998337972799998732211488518808999588998977899998299658871899929--
Q 000671 581 DDVRRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG-- 658 (1361)
Q Consensus 581 ~~~~~~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilge~~~~~G~v~~~g-- 658 (1361)
+.....+.+...+.++++|++|+|+.+ +.++|+|+|+++++|+.++|+||+|||||||+++|+|+++|.+|+|.++|
T Consensus 326 ~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 404 (578)
T 4a82_A 326 NGVGAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHN 404 (578)
T ss_dssp CCTTCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEE
T ss_pred CCCCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf 787766667778807999999975899-9741343379987999999989999859999999846788999679999998
Q ss_pred -----------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf -----------3999925776898888899623999-9989999999982316888219999974136898877958999
Q 000671 659 -----------SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQ 726 (1361)
Q Consensus 659 -----------~iayv~Q~pwi~~~TireNIlfg~~-~d~~~y~~vi~~c~L~~dl~~lp~GD~T~IGe~G~~LSGGQkq 726 (1361)
+++|++|+||++++|++|||.+|.+ .++++..++++.+++.++++.+|+|++|.+||+|.+|||||||
T Consensus 405 ~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~LSgGq~Q 484 (578)
T 4a82_A 405 IKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQ 484 (578)
T ss_dssp GGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHH
T ss_pred HHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCCCHHHHH
T ss_conf 44278999960068992898347645999985279998899999999880959999757330102530688967999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998049989998288889699999999999997815995899982670278425959999398587951868998
Q 000671 727 RIQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELL 806 (1361)
Q Consensus 727 Ri~LARA~y~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kT~ilvth~~~~l~~~d~I~vl~~G~I~~~Gt~~el~ 806 (1361)
|++||||++++|++++||||+|+||+++++.+. +++....+++|+|++||+++.+..||+|++|++|++++.|+++|++
T Consensus 485 rv~lAral~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~el~ 563 (578)
T 4a82_A 485 RLSIARIFLNNPPILILDEATSALDLESESIIQ-EALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELI 563 (578)
T ss_dssp HHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHH-HHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHH
T ss_conf 999999997499999997865457999999999-9999980899799983178999719989999899899988899998
Q ss_pred HCCCHHHHHHH
Q ss_conf 51833899999
Q 000671 807 LAGTAFEQLVN 817 (1361)
Q Consensus 807 ~~~~~~~~l~~ 817 (1361)
+.++.|+++.+
T Consensus 564 ~~~~~~~~~~~ 574 (578)
T 4a82_A 564 AKQGAYEHLYS 574 (578)
T ss_dssp HTTSHHHHHHT
T ss_pred HCCCHHHHHHH
T ss_conf 58838999998
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=615.64 Aligned_cols=543 Identities=20% Similarity=0.212 Sum_probs=442.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99966879999999999999999999999999984138972347899999999999999999999999999999999999
Q 000671 272 TNVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEENLQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMRMRS 351 (1361)
Q Consensus 272 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~ 351 (1361)
++.+++.++...++.++..++..+.|+++..+++....+.. ...-..++..+++..++..++.....+...+.+.++..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (598)
T 3qf4_B 32 LRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR-FDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVF 110 (598)
T ss_dssp TGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC-GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999973688-89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999985499456788997899999996899994088-79889999999999999999999978999999999999
Q 000671 352 ALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFP-FWFHLTWSLALQLFLAIGVLFGVVGLGALPGLVLFLIC 430 (1361)
Q Consensus 352 ~l~~~Iy~K~L~ls~~~~~~~s~G~ivNlms~D~~ri~~~~-~~~~~~w~~plqi~ial~~L~~~lG~~~l~gl~v~~i~ 430 (1361)
.+...+|+|.++++....++.++|+++|.++.|++++.++. ..+..++..++.++.++++++..-.+.+++.++++.+.
T Consensus 111 ~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~l~ 190 (598)
T 3qf4_B 111 RLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLT 190 (598)
T ss_dssp HHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999997799999768888999999999999999999999999999999999999999999899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99989999999999999999999999999999942999998244999999999999999999999999999999999899
Q 000671 431 GLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSEAQLRKAYGTVIYWMS 510 (1361)
Q Consensus 431 ~~l~~~~~~~~~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~i~~~R~~El~~l~~~~~~~~~~~~~~~~~ 510 (1361)
..+...+.+...+.+++..+..+++.+.+.|.++||++||.|+||+.+.++..+.+++..+...+.....+.........
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (598)
T 3qf4_B 191 VLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMV 270 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999737999997487099999999999999999999999999999999999
Q ss_pred HHH--HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC
Q ss_conf 999--999999999985798778889999999999989999999999999999999999999984356789700010023
Q 000671 511 PTI--ISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNNDDVRRISL 588 (1361)
Q Consensus 511 p~l--v~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~ 588 (1361)
..+ +.+..++++.... +.++++.+++.+.++..+..|+..++..+..+.++.+|.+|+.++++.++..+.. ...+.
T Consensus 271 ~~~~~~~~~~~g~~l~~~-g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~-~~~~~ 348 (598)
T 3qf4_B 271 NNLGFALISGFGGWLALK-DIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDP-DAVEL 348 (598)
T ss_dssp HHHHHHHHHHHHHHHGGG-TSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCS-SCCCC
T ss_pred HHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCC
T ss_conf 999999999999999985-9978999999999999999999999999999999999999999997688777777-77777
Q ss_pred CCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC----------
Q ss_conf 5899848998337972799998732211488518808999588998977899998299658871899929----------
Q 000671 589 QKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG---------- 658 (1361)
Q Consensus 589 ~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilge~~~~~G~v~~~g---------- 658 (1361)
.+..+.|+++|++|+|+. +.++|+|+|+++++|+.++|+||+|||||||+++++|.++|.+|+|.++|
T Consensus 349 ~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~ 426 (598)
T 3qf4_B 349 REVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSS 426 (598)
T ss_dssp CSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEEGGGSCHHH
T ss_pred CCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHH
T ss_conf 777771899998997799--986012227998699889998999996999999994585799808999999830188999
Q ss_pred ---EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf ---3999925776898888899623999-998999999998231688821999997413689887795899999999998
Q 000671 659 ---SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQRIQLARAV 734 (1361)
Q Consensus 659 ---~iayv~Q~pwi~~~TireNIlfg~~-~d~~~y~~vi~~c~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqRi~LARA~ 734 (1361)
+++|++|+|+++++|++|||.+|.+ .+++++.++++.++++++++.+|+|++|.+||+|.+||||||||++||||+
T Consensus 427 ~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Qrv~iAral 506 (598)
T 3qf4_B 427 LRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAF 506 (598)
T ss_dssp HHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98410899079823246399997447999999999999999697888974645323642278898799999999999999
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHH
Q ss_conf 04998999828888969999999999999781599589998267027842595999939858795186899851833899
Q 000671 735 YNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLLAGTAFEQ 814 (1361)
Q Consensus 735 y~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kT~ilvth~~~~l~~~d~I~vl~~G~I~~~Gt~~el~~~~~~~~~ 814 (1361)
+++|++++||||+|+||+++++.+.+ ++....+++|+|++||+++.+..||+|++|++|++++.|+++|+++.++.|.+
T Consensus 507 ~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 585 (598)
T 3qf4_B 507 LANPKILILDEATSNVDTKTEKSIQA-AMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYE 585 (598)
T ss_dssp HTCCSEEEECCCCTTCCHHHHHHHHH-HHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHHTTCHHHH
T ss_pred HCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHH
T ss_conf 64999999989766799999999999-99998089989999427789971998999989999987789999867877999
Q ss_pred HHHHHH
Q ss_conf 999732
Q 000671 815 LVNAHR 820 (1361)
Q Consensus 815 l~~~~~ 820 (1361)
+...+.
T Consensus 586 ~~~~~~ 591 (598)
T 3qf4_B 586 LFTSQY 591 (598)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999976
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=614.23 Aligned_cols=546 Identities=20% Similarity=0.238 Sum_probs=425.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999996687999999999999999999999999998413897234789999999999999999999999999999999
Q 000671 268 RKVITNVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEENLQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGM 347 (1361)
Q Consensus 268 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ 347 (1361)
++.+++.+++.++...++.++..++..++|+++..+++...... .....+.++..+++..++..++.....+...+.+.
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (587)
T 3qf4_A 14 LARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARG-DFSLVLKTGILMLIVALIGAVGGIGCTVFASYASQ 92 (587)
T ss_dssp GGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999987369-87999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999998549945678899789999999689999408879-88999999999999999999997899999999
Q 000671 348 RMRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFPFW-FHLTWSLALQLFLAIGVLFGVVGLGALPGLVL 426 (1361)
Q Consensus 348 rir~~l~~~Iy~K~L~ls~~~~~~~s~G~ivNlms~D~~ri~~~~~~-~~~~w~~plqi~ial~~L~~~lG~~~l~gl~v 426 (1361)
++...+...+|+|.++++....++.++|+++|.++.|++++.++... +..++..++.++.++++++..-...+++.+++
T Consensus 93 ~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~ 172 (587)
T 3qf4_A 93 NFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSVLIFL 172 (587)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999788979976588899999999999999999999999999999999999999999989999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Q ss_conf 9999999899999999999999999999999999999429999982449999999999----999999999999999999
Q 000671 427 FLICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIES----RREKEFKWLSEAQLRKAY 502 (1361)
Q Consensus 427 ~~i~~~l~~~~~~~~~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~i~~----~R~~El~~l~~~~~~~~~ 502 (1361)
+.+...+...+.++..+..++..+..+++.+.++|.++|||+||.|+||+.+.++..+ .|+.+.+..+........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (587)
T 3qf4_A 173 IPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVFALPL 252 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999985599999862149999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 99999899999999999999985798778889999999999989999999999999999999999999984356789700
Q 000671 503 GTVIYWMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNNDD 582 (1361)
Q Consensus 503 ~~~~~~~~p~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~ 582 (1361)
..++ .....+.+..++++.... +.++++.+++.+.++..+..|+..++..+..+.++.+|.+|+.++++.++..++.
T Consensus 253 ~~~~--~~~~~~~vl~~g~~~v~~-g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~ 329 (587)
T 3qf4_A 253 FIFI--VNMGMIAVLWFGGVLVRN-NQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEEA 329 (587)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHHT-TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCC
T ss_pred HHHH--HHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9999--999999999999999984-9938999999999999999999999999999999999999999997689765788
Q ss_pred HHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC----
Q ss_conf 0100235899848998337972799998732211488518808999588998977899998299658871899929----
Q 000671 583 VRRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG---- 658 (1361)
Q Consensus 583 ~~~~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilge~~~~~G~v~~~g---- 658 (1361)
....+.++.++.|+++|++|+|+.+ +.++|+|+||++++||.++|+||+|||||||+++|+|.+++.+|+|.++|
T Consensus 330 ~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~i~ 408 (587)
T 3qf4_A 330 DNALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVR 408 (587)
T ss_dssp TTCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSSBGG
T ss_pred CCCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECC
T ss_conf 7765668888807997889984899-976421117998699889998999997999999992786699867989999834
Q ss_pred ---------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf ---------3999925776898888899623999-998999999998231688821999997413689887795899999
Q 000671 659 ---------SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQRI 728 (1361)
Q Consensus 659 ---------~iayv~Q~pwi~~~TireNIlfg~~-~d~~~y~~vi~~c~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqRi 728 (1361)
+++|++|+|+++++|++|||.+|.+ .+++++.++++.|++.++++.+|+|++|.+||+|.+||||||||+
T Consensus 409 ~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqrQrv 488 (587)
T 3qf4_A 409 TVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQRL 488 (587)
T ss_dssp GBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHHHHH
T ss_pred CCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHHHHH
T ss_conf 07899998413897789867675599998524889999999999999684999975653121275189899299999999
Q ss_pred HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHC
Q ss_conf 99999804998999828888969999999999999781599589998267027842595999939858795186899851
Q 000671 729 QLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLLA 808 (1361)
Q Consensus 729 ~LARA~y~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kT~ilvth~~~~l~~~d~I~vl~~G~I~~~Gt~~el~~~ 808 (1361)
+||||++++|++++||||+|+||+++++.+.+ .+....+++|+|++||+++.+..||+|++|++|++++.|+++|+++.
T Consensus 489 ~lARal~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 567 (587)
T 3qf4_A 489 SIARALVKKPKVLILDDCTSSVDPITEKRILD-GLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELLEH 567 (587)
T ss_dssp HHHHHHHTCCSEEEEESCCTTSCHHHHHHHHH-HHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHC
T ss_conf 99999972999999979754479999999999-99986799989998227688981998999989989997889999867
Q ss_pred CCHHHHHHHHH
Q ss_conf 83389999973
Q 000671 809 GTAFEQLVNAH 819 (1361)
Q Consensus 809 ~~~~~~l~~~~ 819 (1361)
++.|.++...+
T Consensus 568 ~~~~~~~~~~~ 578 (587)
T 3qf4_A 568 CKPYREIYESQ 578 (587)
T ss_dssp CHHHHHHHHHH
T ss_pred CCHHHHHHHHH
T ss_conf 83999999998
No 7
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=588.78 Aligned_cols=541 Identities=18% Similarity=0.225 Sum_probs=431.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99996687999999999999999999999999998413897234789999999999999999999999999999999999
Q 000671 271 ITNVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEENLQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMRMR 350 (1361)
Q Consensus 271 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~rir 350 (1361)
..+.+++.++...++.++..++..+.|+++..+++...... .....+.++.++++..++..++.....+...+.+.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (582)
T 3b60_A 19 TIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKT-DRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVV 97 (582)
T ss_dssp HHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTST-THHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999884368-65799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998549945678899789999999689999408-87988999999999999999999997899999999999
Q 000671 351 SALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEF-PFWFHLTWSLALQLFLAIGVLFGVVGLGALPGLVLFLI 429 (1361)
Q Consensus 351 ~~l~~~Iy~K~L~ls~~~~~~~s~G~ivNlms~D~~ri~~~-~~~~~~~w~~plqi~ial~~L~~~lG~~~l~gl~v~~i 429 (1361)
..+...+|+|.++++....++.++|+++|.++.|++.+.++ ...+..++..++.+++++++++..-.+.+++.++++.+
T Consensus 98 ~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l 177 (582)
T 3b60_A 98 MTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPI 177 (582)
T ss_dssp HHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999809999978898658999999879999999999999999999999999999999809999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998999999999999999999999999999994299999824499999999----99999999999999999999999
Q 000671 430 CGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLI----ESRREKEFKWLSEAQLRKAYGTV 505 (1361)
Q Consensus 430 ~~~l~~~~~~~~~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~i----~~~R~~El~~l~~~~~~~~~~~~ 505 (1361)
...+...+.+...+..++..+..+++.+.+.|.++|+++||.|++|+.+.++. .+.++.+.+..+..........+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (582)
T 3b60_A 178 VSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQL 257 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999996199999837689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 99899999999999999985798778889999999999989999999999999999999999999984356789700010
Q 000671 506 IYWMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNNDDVRR 585 (1361)
Q Consensus 506 ~~~~~p~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 585 (1361)
+...... .+..++++ ++..+.++++.+++.+.++..+..|+..++..+..+.++.++.+|+.++++.++..++. .
T Consensus 258 ~~~~~~~--~~~~~g~~-~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~--~ 332 (582)
T 3b60_A 258 IASLALA--FVLYAASF-PSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEG--K 332 (582)
T ss_dssp HHHHHHH--HHHHHHHS-SSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCCC--C
T ss_pred HHHHHHH--HHHHHHHH-HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--C
T ss_conf 9999999--99999999-99849998999999999999999999999999999999999999999997599876677--7
Q ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-------
Q ss_conf 0235899848998337972799998732211488518808999588998977899998299658871899929-------
Q 000671 586 ISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG------- 658 (1361)
Q Consensus 586 ~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilge~~~~~G~v~~~g------- 658 (1361)
.+.++..+.++++|.+|+|+.+ +.++|+|+|+++++|+.++|+||+|||||||++++.|.++|.+|+|.++|
T Consensus 333 ~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~ 411 (582)
T 3b60_A 333 RVIDRATGDLEFRNVTFTYPGR-EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYT 411 (582)
T ss_dssp BCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBC
T ss_pred CCCCCCCCCEEEEEEEEECCCC-CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEECCCCC
T ss_conf 7777888847999889973999-974415615997699989998999998999999986106898976979999823069
Q ss_pred ------EEEEEECCCCCCCCCHHHHHHCCC--CCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf ------399992577689888889962399--999899999999823168882199999741368988779589999999
Q 000671 659 ------SIAYVSQTSWIQSGSIRDNILYGK--PMDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQRIQL 730 (1361)
Q Consensus 659 ------~iayv~Q~pwi~~~TireNIlfg~--~~d~~~y~~vi~~c~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqRi~L 730 (1361)
+++|++|+|+++++|++|||.+|. ..++++++++++.+++.++++.+|+|++|.+||+|.+||||||||++|
T Consensus 412 ~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq~qrl~i 491 (582)
T 3b60_A 412 LASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAI 491 (582)
T ss_dssp HHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHHHH
T ss_pred HHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999608088068747787899998545999989999999999849799998450411451147988789999999999
Q ss_pred HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCC
Q ss_conf 99980499899982888896999999999999978159958999826702784259599993985879518689985183
Q 000671 731 ARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLLAGT 810 (1361)
Q Consensus 731 ARA~y~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kT~ilvth~~~~l~~~d~I~vl~~G~I~~~Gt~~el~~~~~ 810 (1361)
|||++++|++++||||+|+||+++++.+.+ .+....+++|+|++||+++.+..||+|++|++|++++.|+++|+++.++
T Consensus 492 Aral~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 570 (582)
T 3b60_A 492 ARALLRDSPILILDEATSALDTESERAIQA-ALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHG 570 (582)
T ss_dssp HHHHHHCCSEEEEETTTSSCCHHHHHHHHH-HHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHHHHHTS
T ss_pred HHHHHHCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCC
T ss_conf 999972899899978655579899999999-9999967997999945477898599899997888988458999987698
Q ss_pred HHHHHHHHH
Q ss_conf 389999973
Q 000671 811 AFEQLVNAH 819 (1361)
Q Consensus 811 ~~~~l~~~~ 819 (1361)
.|.++.+.+
T Consensus 571 ~~~~~~~~q 579 (582)
T 3b60_A 571 VYAQLHKMQ 579 (582)
T ss_dssp SHHHHHHHT
T ss_pred HHHHHHHHH
T ss_conf 899999975
No 8
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=587.15 Aligned_cols=541 Identities=18% Similarity=0.224 Sum_probs=433.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99996687999999999999999999999999998413897234789999999999999999999999999999999999
Q 000671 271 ITNVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEENLQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMRMR 350 (1361)
Q Consensus 271 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~rir 350 (1361)
..+.+++.++...++.++..++..+.|+++..+++...... .....+.++.++++..++..++.....+...+.+.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (582)
T 3b5x_A 19 YIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNA-ESNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNVV 97 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98899999999999999999999999999999999986468-66799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998549945678899789999999689999408-87988999999999999999999997899999999999
Q 000671 351 SALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEF-PFWFHLTWSLALQLFLAIGVLFGVVGLGALPGLVLFLI 429 (1361)
Q Consensus 351 ~~l~~~Iy~K~L~ls~~~~~~~s~G~ivNlms~D~~ri~~~-~~~~~~~w~~plqi~ial~~L~~~lG~~~l~gl~v~~i 429 (1361)
..+...+|+|.++++....++.++|+++|.++.|++++.++ ...+..++..++.+++++++++..-.+.+++.++++.+
T Consensus 98 ~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l 177 (582)
T 3b5x_A 98 MQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPV 177 (582)
T ss_pred HHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999869999977898789999999889999999999999999999999999999999829999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999899999999999999999999999999999429999982449999999----999999999999999999999999
Q 000671 430 CGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSL----IESRREKEFKWLSEAQLRKAYGTV 505 (1361)
Q Consensus 430 ~~~l~~~~~~~~~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~----i~~~R~~El~~l~~~~~~~~~~~~ 505 (1361)
...+...+.+...+..++..+..+++.+.+.|.++|+|+||.|++|+.+.++ ..+.++.+.+..+..........+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (582)
T 3b5x_A 178 VAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQM 257 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999995199999708759999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 99899999999999999985798778889999999999989999999999999999999999999984356789700010
Q 000671 506 IYWMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNNDDVRR 585 (1361)
Q Consensus 506 ~~~~~p~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 585 (1361)
+...... .+..++++.... +.++++.+++.+.++..+..|+..++..+..+.++.++.+|+.++++.++..++. .
T Consensus 258 ~~~~~~~--~i~~~g~~~v~~-g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~--~ 332 (582)
T 3b5x_A 258 IASLALF--AVLFLASVDSIR-AELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDNG--K 332 (582)
T ss_pred HHHHHHH--HHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--C
T ss_conf 9999999--999999999985-9988999999999999999999999999999999999999999997589767777--7
Q ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-------
Q ss_conf 0235899848998337972799998732211488518808999588998977899998299658871899929-------
Q 000671 586 ISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG------- 658 (1361)
Q Consensus 586 ~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilge~~~~~G~v~~~g------- 658 (1361)
.+.+...+.++++|++|+|+.+ +.++|+|+|+++++|+.++|+||+|||||||++++.|.++|.+|+|.++|
T Consensus 333 ~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~ 411 (582)
T 3b5x_A 333 YEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYK 411 (582)
T ss_pred CCCCCCCCEEEEEEEEEECCCC-CCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHHHCC
T ss_conf 7777788828999989972899-865400416998799989998999997999999996577899987989999856388
Q ss_pred ------EEEEEECCCCCCCCCHHHHHHCCC--CCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf ------399992577689888889962399--999899999999823168882199999741368988779589999999
Q 000671 659 ------SIAYVSQTSWIQSGSIRDNILYGK--PMDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQRIQL 730 (1361)
Q Consensus 659 ------~iayv~Q~pwi~~~TireNIlfg~--~~d~~~y~~vi~~c~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqRi~L 730 (1361)
+++|++|+|+++++|++|||.+|. ..++++++++++.++++++++.+|+|++|.+||+|.+||||||||++|
T Consensus 412 ~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq~qr~~i 491 (582)
T 3b5x_A 412 LTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAI 491 (582)
T ss_pred HHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHH
T ss_conf 99996485898279905310299998566889999999999999879899998476533451068888479999999999
Q ss_pred HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCC
Q ss_conf 99980499899982888896999999999999978159958999826702784259599993985879518689985183
Q 000671 731 ARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLLAGT 810 (1361)
Q Consensus 731 ARA~y~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kT~ilvth~~~~l~~~d~I~vl~~G~I~~~Gt~~el~~~~~ 810 (1361)
|||++++|++++||||+|+||+++++.+.+ .+....+++|+|++||+++.+..||+|++|++|++++.|+++|+++.++
T Consensus 492 Aral~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 570 (582)
T 3b5x_A 492 ARALLRDAPVLILDEATSALDTESERAIQA-ALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDG 570 (582)
T ss_pred HHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCC
T ss_conf 999974999999978544689999999999-9999728998999936889998199899998998999778999984885
Q ss_pred HHHHHHHHH
Q ss_conf 389999973
Q 000671 811 AFEQLVNAH 819 (1361)
Q Consensus 811 ~~~~l~~~~ 819 (1361)
.|.++.+.+
T Consensus 571 ~~~~~~~~q 579 (582)
T 3b5x_A 571 AYAQLHRIQ 579 (582)
T ss_pred HHHHHHHHH
T ss_conf 899999986
No 9
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=586.37 Aligned_cols=544 Identities=20% Similarity=0.213 Sum_probs=421.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999668799999999999999999999999999841389-7234-7899999999999999999999999999999999
Q 000671 271 ITNVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRG-EENL-QEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMR 348 (1361)
Q Consensus 271 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~-~~~~-~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~r 348 (1361)
+.+.+++.++...++.++..++..+.|+++..+++..... .... ..-+.++..+++..++..++.....+...+.+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (595)
T 2yl4_A 13 LAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQR 92 (595)
T ss_dssp HHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98878999999999999999999999999999999997357402667999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998549945678899789999999689999408-879889999999999999999999978999999999
Q 000671 349 MRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEF-PFWFHLTWSLALQLFLAIGVLFGVVGLGALPGLVLF 427 (1361)
Q Consensus 349 ir~~l~~~Iy~K~L~ls~~~~~~~s~G~ivNlms~D~~ri~~~-~~~~~~~w~~plqi~ial~~L~~~lG~~~l~gl~v~ 427 (1361)
+...+...+|+|.++++....++.++|+++|.++.|++.+.+. ...+..++..++.+++++++++..-.+.+++.++++
T Consensus 93 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~ 172 (595)
T 2yl4_A 93 IVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLSVV 172 (595)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998199999777984889999999999999999999999999999999999999998199999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999998999999999999999999999999999994299999824499999999----999999999999999999999
Q 000671 428 LICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLI----ESRREKEFKWLSEAQLRKAYG 503 (1361)
Q Consensus 428 ~i~~~l~~~~~~~~~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~i----~~~R~~El~~l~~~~~~~~~~ 503 (1361)
.+...+...+.+...+..++..+..++..+.+.|.++||++||.|++|+.+.++. .+.++.+.+..+.........
T Consensus 173 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (595)
T 2yl4_A 173 PPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGAT 252 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999811999998375699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 99998999999999999999857987788899999999999899999999999999999999999999843567897000
Q 000671 504 TVIYWMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNNDDV 583 (1361)
Q Consensus 504 ~~~~~~~p~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 583 (1361)
.++... ..+.+..++++.... +.++++..++.+.+...+..|+..++..+..+.++.++.+|+.++++.++..++..
T Consensus 253 ~~~~~~--~~~~~~~~g~~~v~~-g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~ 329 (595)
T 2yl4_A 253 GLSGNL--IVLSVLYKGGLLMGS-AHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFNE 329 (595)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHT-TSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCSSC
T ss_pred HHHHHH--HHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999--999999999999986-99789999999999999999999999999999999999999999983897667777
Q ss_pred HHCCCCCCCCC-EEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC----
Q ss_conf 10023589984-8998337972799998732211488518808999588998977899998299658871899929----
Q 000671 584 RRISLQKSDRS-VKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG---- 658 (1361)
Q Consensus 584 ~~~~~~~~~~~-I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilge~~~~~G~v~~~g---- 658 (1361)
...+..+..+. |+++|++|+|+.+++.++|+|+|+++++|+.++|+||+|||||||+++|.|.++|.+|+|.++|
T Consensus 330 ~~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~i~ 409 (595)
T 2yl4_A 330 GVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIR 409 (595)
T ss_dssp SBCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEETTEETT
T ss_pred CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHH
T ss_conf 87777678998389998899858998881201127998499889998999997999999982585789837999999811
Q ss_pred ---------EEEEEECCCCCCCCCHHHHHHCCCC----CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf ---------3999925776898888899623999----998999999998231688821999997413689887795899
Q 000671 659 ---------SIAYVSQTSWIQSGSIRDNILYGKP----MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQK 725 (1361)
Q Consensus 659 ---------~iayv~Q~pwi~~~TireNIlfg~~----~d~~~y~~vi~~c~L~~dl~~lp~GD~T~IGe~G~~LSGGQk 725 (1361)
+++|++|+|+++++|++|||.+|.+ .++++++++++.+++.++++.+|+|++|.+||+|.+||||||
T Consensus 410 ~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~LSgGq~ 489 (595)
T 2yl4_A 410 QLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQK 489 (595)
T ss_dssp TBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCCCCHHHH
T ss_pred HCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHH
T ss_conf 17999997322898368832687799998405877665689999999998697999974732013501688786899999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999804998999828888969999999999999781599589998267027842595999939858795186899
Q 000671 726 QRIQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQEL 805 (1361)
Q Consensus 726 qRi~LARA~y~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kT~ilvth~~~~l~~~d~I~vl~~G~I~~~Gt~~el 805 (1361)
||++||||++++|++++||||+|+||+++.+.+. +.+....+++|+|++||+++.+..||+|++|++|++++.|+++|+
T Consensus 490 qrv~iAral~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 568 (595)
T 2yl4_A 490 QRIAIARALLKNPKILLLDEATSALDAENEYLVQ-EALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEEL 568 (595)
T ss_dssp HHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHH-HHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEECSCC-
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHH
T ss_conf 9999999997599999998866689989999999-999999659979999468789975998999989989997889999
Q ss_pred HHC-CCHHHHHHHH
Q ss_conf 851-8338999997
Q 000671 806 LLA-GTAFEQLVNA 818 (1361)
Q Consensus 806 ~~~-~~~~~~l~~~ 818 (1361)
++. ++.|.++.+.
T Consensus 569 ~~~~~~~~~~~~~~ 582 (595)
T 2yl4_A 569 LSKPNGIYRKLMNK 582 (595)
T ss_dssp -----C--------
T ss_pred HHCCCHHHHHHHHH
T ss_conf 74787299999997
No 10
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=537.16 Aligned_cols=542 Identities=20% Similarity=0.229 Sum_probs=389.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66879999999999999999999999999984138972---347899999999999999999999999999999999999
Q 000671 275 YLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEE---NLQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMRMRS 351 (1361)
Q Consensus 275 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~---~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~ 351 (1361)
.|+.++...++.++..++..+.|+++..+++....... .......++..+++..++..+......+...+.+.++..
T Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~ 782 (1284)
T 3g5u_A 703 EWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTK 782 (1284)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999999999999999999999855685033677999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q ss_conf 999999999854994567--889978999999968999940887-98899999999999999999---999789999999
Q 000671 352 ALMVAVYQKQLKLSSLGR--KKHSTGEIVNYIAVDAYRMGEFPF-WFHLTWSLALQLFLAIGVLF---GVVGLGALPGLV 425 (1361)
Q Consensus 352 ~l~~~Iy~K~L~ls~~~~--~~~s~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~ial~~L~---~~lG~~~l~gl~ 425 (1361)
.+...+|+|.++.+..-. .+.++|+++|.++.|++.+.+... .+..+....+.++.++++++ +.+++.+++.++
T Consensus 783 ~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p 862 (1284)
T 3g5u_A 783 RLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVP 862 (1284)
T ss_dssp HHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998399888757899889999999999999999999999999999999999999999996999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999899999999999999999999999999999429999982449999999999999999999999999999999
Q 000671 426 LFLICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSEAQLRKAYGTV 505 (1361)
Q Consensus 426 v~~i~~~l~~~~~~~~~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~i~~~R~~El~~l~~~~~~~~~~~~ 505 (1361)
++++ +.....+...+...+..+..++..+...|.++|+++||.+++|+.+.++..+..+...+...+.....+....
T Consensus 863 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (1284)
T 3g5u_A 863 IIAI---AGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFS 939 (1284)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999---9999999999999999999999999999999889999984659999999999999999999999999999999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-HH
Q ss_conf 998999-9999999999998579877888999999999998999999999999999999999999998435678970-00
Q 000671 506 IYWMSP-TIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNND-DV 583 (1361)
Q Consensus 506 ~~~~~p-~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~-~~ 583 (1361)
+..... .....+.+.+..++..+.++.+.++..+..+.....|+..+......+.++..+.+|+.++++.++..+. ..
T Consensus 940 ~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~ 1019 (1284)
T 3g5u_A 940 FTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYST 1019 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999999999999999990980699999999999999999999999999999999999999999838876666555
Q ss_pred HHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-----
Q ss_conf 100235899848998337972799998732211488518808999588998977899998299658871899929-----
Q 000671 584 RRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG----- 658 (1361)
Q Consensus 584 ~~~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilge~~~~~G~v~~~g----- 658 (1361)
...+.....+.|+++|++|+|+.+++.++|+|+||++++||.++|+|++|||||||+++|.|.+++.+|+|.++|
T Consensus 1020 ~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~ 1099 (1284)
T 3g5u_A 1020 QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQ 1099 (1284)
T ss_dssp SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTS
T ss_pred CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCC
T ss_conf 66545677785799998997799998700203059976998899988999978999999946867899779899998000
Q ss_pred --------EEEEEECCCCCCCCCHHHHHHCCCC---CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf --------3999925776898888899623999---99899999999823168882199999741368988779589999
Q 000671 659 --------SIAYVSQTSWIQSGSIRDNILYGKP---MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQR 727 (1361)
Q Consensus 659 --------~iayv~Q~pwi~~~TireNIlfg~~---~d~~~y~~vi~~c~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqR 727 (1361)
+++||||+|.++++||+|||.+|.+ .++++..++++.+.+.+.++.+|+|.+|.|||+|.+||||||||
T Consensus 1100 ~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qr 1179 (1284)
T 3g5u_A 1100 LNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQR 1179 (1284)
T ss_dssp SCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHH
T ss_pred CCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 78999970268987787406666999974668778999999999999839599997270424561178889338999999
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHH
Q ss_conf 99999980499899982888896999999999999978159958999826702784259599993985879518689985
Q 000671 728 IQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLL 807 (1361)
Q Consensus 728 i~LARA~y~~~~i~lLDdp~salD~~~~~~i~~~~i~~~l~~kT~ilvth~~~~l~~~d~I~vl~~G~I~~~Gt~~el~~ 807 (1361)
++||||++++|++++||||+|+||..+.+.|. +.+....+++|+|++||+++.+..||+|++|++|+|++.|+++|+++
T Consensus 1180 v~iARal~~~p~iLiLDEpTs~lD~~~~~~i~-~~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~ 1258 (1284)
T 3g5u_A 1180 IAIARALVRQPHILLLDEATSALDTESEKVVQ-EALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLA 1258 (1284)
T ss_dssp HHHHHHHHHCCSSEEEESCSSSCCHHHHHHHH-HHHHHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH
T ss_conf 99999997499999986875557999999999-99998679998999955879998099899998998999778999984
Q ss_pred CCCHHHHHHHHHH
Q ss_conf 1833899999732
Q 000671 808 AGTAFEQLVNAHR 820 (1361)
Q Consensus 808 ~~~~~~~l~~~~~ 820 (1361)
+++.|.++.+.+.
T Consensus 1259 ~~g~y~~l~~~q~ 1271 (1284)
T 3g5u_A 1259 QKGIYFSMVSVQA 1271 (1284)
T ss_dssp SCSHHHHHHHHHC
T ss_pred CCCHHHHHHHHHH
T ss_conf 7777999999976
Done!