BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 000672
         (1360 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|302143565|emb|CBI22318.3| unnamed protein product [Vitis vinifera]
          Length = 1477

 Score = 1910 bits (4948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1012/1351 (74%), Positives = 1134/1351 (83%), Gaps = 30/1351 (2%)

Query: 37   SGQDDGLHLEEHLTEEEIEELIAEFLEVESKAAEAQEALELESLVKLKNEVREELAQALH 96
            SGQDDGLHLE  LTEEEIEELIAEFL+VESKAAEAQE+LE ESL KL+ EVREELAQ L 
Sbjct: 3    SGQDDGLHLEVTLTEEEIEELIAEFLDVESKAAEAQESLEEESLSKLEIEVREELAQTLQ 62

Query: 97   GDDLEAAVEDEMTVYKEQWEAALDELETESAHLLEQLDGAGIELPSLYRLIENQVPNGCC 156
            G+DLE AV +EM  +KE+WEA LDELETESAHLLEQLDGAGIELPSLY+ IE+Q PNGCC
Sbjct: 63   GNDLETAVAEEMANFKEEWEAVLDELETESAHLLEQLDGAGIELPSLYKWIESQAPNGCC 122

Query: 157  TEAWKRRAHWVGSQVTSEMRESIAGAEDFLQTERPVRRRHGKLLEEGASGFLQKKIANDG 216
            TEAWK+R HW+GSQVT +  ESI  AE  LQT+RPVRRRHGKLLEEGASG+L  K+A+DG
Sbjct: 123  TEAWKQRVHWIGSQVTGDTTESIIEAEKHLQTDRPVRRRHGKLLEEGASGYLANKLASDG 182

Query: 217  SENGGKEVSDINWNSVNKIFSGDVSEKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDE 276
            +     E ++++W S NK FS   SE    FGS+HWASVYLASTPQQAA MGLKFPGVDE
Sbjct: 183  NREAVTENAEVDWCSFNKCFSDHASEDSTLFGSEHWASVYLASTPQQAAVMGLKFPGVDE 242

Query: 277  VEEIEDVDGNSDDPFVADAIANEKELALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRH 336
            VEEI+D+DGNS DPFVADAIANE+ + LSEEQ+KKF+KVKEEDDAN+DRKLQLHLKRRR+
Sbjct: 243  VEEIDDIDGNSSDPFVADAIANERAVDLSEEQKKKFKKVKEEDDANIDRKLQLHLKRRRY 302

Query: 337  RKISKQKEIGSVDWTIEDSAVETRPLVDASKSLSNKKT--DDGDMPGNNNEVALQNLETG 394
            RK S Q+ I   D   E+    +  L D S+++  +KT  D   +  NN++ A Q+ +T 
Sbjct: 303  RKRSTQETIQKEDRLAENILDNSVLLNDYSQAVLREKTRGDGVSISNNNDDGACQSSKTE 362

Query: 395  VLESSV------KERSLSNGISSV-SDSALPDSSELRGIKRSNESEEPNSEKKRSRTIII 447
            V ES        KER  SNG SSV S S LPDS+E +G KRS+++ E + + KR RT+II
Sbjct: 363  VSESLEMPDTLDKERPASNGNSSVLSGSVLPDSTETKGFKRSHDNGELDVDNKRFRTVII 422

Query: 448  GSDEADVVKDECS-------TKLEDHSVSPENINDAATDNSLHSQSLSEKFYCTACNNVA 500
             SD+        S       TK+E  SV  E   D     SL S+ ++  F+CTACN VA
Sbjct: 423  DSDDETHEVGNVSNSLVNNMTKMEGQSVLQETEGDFVGSGSLPSKHMNGNFHCTACNKVA 482

Query: 501  IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTC 560
            IEVH HP+L VI+C DCKCL+E+KMHVKD DCSECYC WCGRS+DLV CKSCKTLFC TC
Sbjct: 483  IEVHCHPLLKVIICGDCKCLIERKMHVKDPDCSECYCGWCGRSNDLVGCKSCKTLFCITC 542

Query: 561  VKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSELGRAMGSENLIVSSSESDSENSDAD 620
            +KRNI E CLSD V+AS WQCCCCSPSLL++LTSEL +A+GS +L VSSS+SDS++SD D
Sbjct: 543  IKRNIGEECLSD-VKASGWQCCCCSPSLLQQLTSELEKAIGSSSLTVSSSDSDSDDSDED 601

Query: 621  NNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVT 680
             N+ I  KR++KKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFS KSK+MN+ +
Sbjct: 602  INVAISSKRRRKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSEKSKMMNAAS 661

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII 740
             +G+LS   S+EVLGDA  GYIVNVVREKGEEAVRIP SISAKLK HQ+ GIRFMWENII
Sbjct: 662  CNGNLSEDTSVEVLGDASKGYIVNVVREKGEEAVRIPPSISAKLKVHQITGIRFMWENII 721

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWK 800
            QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS++LGLRTALIVTPVNVLHNW+
Sbjct: 722  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSIDLGLRTALIVTPVNVLHNWR 781

Query: 801  QEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR 860
            QEF+KWRP ELKPLRVFMLEDVSR+RRAELLAKWRAKGGVFLIGY+AFRNLS GK+VKDR
Sbjct: 782  QEFIKWRPLELKPLRVFMLEDVSRERRAELLAKWRAKGGVFLIGYSAFRNLSLGKNVKDR 841

Query: 861  NMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
            +MAREIC+ALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY
Sbjct: 842  HMAREICYALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 901

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
            CMVDFVREGFLGSSHEFRNRFQNPIENGQH NSTS+DVKIMNQRSHILYEQLKGFVQRMD
Sbjct: 902  CMVDFVREGFLGSSHEFRNRFQNPIENGQHMNSTSDDVKIMNQRSHILYEQLKGFVQRMD 961

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRK-SFFAGYQALA 1039
            M+VVK DLPPKTVFV+ VKLS LQR+LYKRFLD+HGFTND+VS++KIRK  FFAGYQALA
Sbjct: 962  MSVVKNDLPPKTVFVMAVKLSSLQRKLYKRFLDVHGFTNDKVSSDKIRKRCFFAGYQALA 1021

Query: 1040 QIWNHPGILQLTK-DKGYPSRED------AEDSSSDENMDYNVVIGEKPRNMNDFLQGKN 1092
            QIWNHPGILQLTK +K Y  RED      A+DSSSD+N+DYN V+GEK RN N+  QGK 
Sbjct: 1022 QIWNHPGILQLTKEEKDYARREDGVENFLADDSSSDDNIDYNTVLGEKVRNKNEIQQGKV 1081

Query: 1093 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEF 1152
            D G +QK WWNDLLHE+ YKE+DYSGKMVLLLDILTMC+++GDK+LVFSQS+ TLDLIE+
Sbjct: 1082 DSGLYQKGWWNDLLHENNYKEVDYSGKMVLLLDILTMCADVGDKALVFSQSLSTLDLIEY 1141

Query: 1153 YLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            YLSKL R GK+GK WK+GKDWYRLDGRTE SERQKLVERFN+PLNKRVKCTLISTRAGSL
Sbjct: 1142 YLSKLSRQGKKGKCWKQGKDWYRLDGRTEGSERQKLVERFNDPLNKRVKCTLISTRAGSL 1201

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK
Sbjct: 1202 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1261

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNC----AL 1328
            EGLAARVVDRQQVHRTISKEEMLHLF+FGDDENPD L    KE    ++QN       +L
Sbjct: 1262 EGLAARVVDRQQVHRTISKEEMLHLFDFGDDENPDILPERGKEEEHTTNQNMTGQVGNSL 1321

Query: 1329 KHKLPLSHEGC-SDKLMESLLGKHHPRCAVN 1358
            K KL LSH  C SDKLMESLL +H+PR   N
Sbjct: 1322 KDKLSLSHGSCSSDKLMESLLVRHYPRWIAN 1352


>gi|359488066|ref|XP_002263799.2| PREDICTED: uncharacterized protein LOC100244360 [Vitis vinifera]
          Length = 1507

 Score = 1907 bits (4941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1013/1359 (74%), Positives = 1137/1359 (83%), Gaps = 32/1359 (2%)

Query: 31   SDEPSISGQDDGLHLEEHLTEEEIEELIAEFLEVESKAAEAQEALELESLVKLKNEVREE 90
            ++E   SGQDDGLHLE  LTEEEIEELIAEFL+VESKAAEAQE+LE ESL KL+ EVREE
Sbjct: 25   NNESMTSGQDDGLHLEVTLTEEEIEELIAEFLDVESKAAEAQESLEEESLSKLEIEVREE 84

Query: 91   LAQALHGDDLEAAVEDEMTVYKEQWEAALDELETESAHLLEQLDGAGIELPSLYRLIENQ 150
            LAQ L G+DLE AV +EM  +KE+WEA LDELETESAHLLEQLDGAGIELPSLY+ IE+Q
Sbjct: 85   LAQTLQGNDLETAVAEEMANFKEEWEAVLDELETESAHLLEQLDGAGIELPSLYKWIESQ 144

Query: 151  VPNGCCTEAWKRRAHWVGSQVTSEMRESIAGAEDFLQTERPVRRRHGKLLEEGASGFLQK 210
             PNGCCTEAWK+R HW+GSQVT +  ESI  AE  LQT+RPVRRRHGKLLEEGASG+L  
Sbjct: 145  APNGCCTEAWKQRVHWIGSQVTGDTTESIIEAEKHLQTDRPVRRRHGKLLEEGASGYLAN 204

Query: 211  KIANDGSENGGKEVSDINWNSVNKIFSGDVSEKCAAFGSKHWASVYLASTPQQAAAMGLK 270
            K+A+DG+     E ++++W S NK FS   SE    FGS+HWASVYLASTPQQAA MGLK
Sbjct: 205  KLASDGNREAVTENAEVDWCSFNKCFSDHASEDSTLFGSEHWASVYLASTPQQAAVMGLK 264

Query: 271  FPGVDEVEEIEDVDGNSDDPFVADAIANEKELALSEEQRKKFRKVKEEDDANMDRKLQLH 330
            FPGVDEVEEI+D+DGNS DPFVADAIANE+ + LSEEQ+KKF+KVKEEDDAN+DRKLQLH
Sbjct: 265  FPGVDEVEEIDDIDGNSSDPFVADAIANERAVDLSEEQKKKFKKVKEEDDANIDRKLQLH 324

Query: 331  LKRRRHRKISKQKEIGSVDWTIEDSAVETRPLVDASKSLSNKKT--DDGDMPGNNNEVAL 388
            LKRRR+RK S Q+ I   D   E+    +  L D S+++  +KT  D   +  NN++ A 
Sbjct: 325  LKRRRYRKRSTQETIQKEDRLAENILDNSVLLNDYSQAVLREKTRGDGVSISNNNDDGAC 384

Query: 389  QNLETGVLESSV------KERSLSNGISSV-SDSALPDSSELRGIKRSNESEEPNSEKKR 441
            Q+ +T V ES        KER  SNG SSV S S LPDS+E +G KRS+++ E + + KR
Sbjct: 385  QSSKTEVSESLEMPDTLDKERPASNGNSSVLSGSVLPDSTETKGFKRSHDNGELDVDNKR 444

Query: 442  SRTIIIGSDEADVVKDECS-------TKLEDHSVSPENINDAATDNSLHSQSLSEKFYCT 494
             RT+II SD+        S       TK+E  SV  E   D     SL S+ ++  F+CT
Sbjct: 445  FRTVIIDSDDETHEVGNVSNSLVNNMTKMEGQSVLQETEGDFVGSGSLPSKHMNGNFHCT 504

Query: 495  ACNNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKT 554
            ACN VAIEVH HP+L VI+C DCKCL+E+KMHVKD DCSECYC WCGRS+DLV CKSCKT
Sbjct: 505  ACNKVAIEVHCHPLLKVIICGDCKCLIERKMHVKDPDCSECYCGWCGRSNDLVGCKSCKT 564

Query: 555  LFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSELGRAMGSENLIVSSSESDS 614
            LFC TC+KRNI E CLSD V+AS WQCCCCSPSLL++LTSEL +A+GS +L VSSS+SDS
Sbjct: 565  LFCITCIKRNIGEECLSD-VKASGWQCCCCSPSLLQQLTSELEKAIGSSSLTVSSSDSDS 623

Query: 615  ENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSK 674
            ++SD D N+ I  KR++KKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFS KSK
Sbjct: 624  DDSDEDINVAISSKRRRKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSEKSK 683

Query: 675  LMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRF 734
            +MN+ + +G+LS   S+EVLGDA  GYIVNVVREKGEEAVRIP SISAKLK HQ+ GIRF
Sbjct: 684  MMNAASCNGNLSEDTSVEVLGDASKGYIVNVVREKGEEAVRIPPSISAKLKVHQITGIRF 743

Query: 735  MWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVN 794
            MWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS++LGLRTALIVTPVN
Sbjct: 744  MWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSIDLGLRTALIVTPVN 803

Query: 795  VLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFG 854
            VLHNW+QEF+KWRP ELKPLRVFMLEDVSR+RRAELLAKWRAKGGVFLIGY+AFRNLS G
Sbjct: 804  VLHNWRQEFIKWRPLELKPLRVFMLEDVSRERRAELLAKWRAKGGVFLIGYSAFRNLSLG 863

Query: 855  KHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN 914
            K+VKDR+MAREIC+ALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN
Sbjct: 864  KNVKDRHMAREICYALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN 923

Query: 915  NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG 974
            NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH NSTS+DVKIMNQRSHILYEQLKG
Sbjct: 924  NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHMNSTSDDVKIMNQRSHILYEQLKG 983

Query: 975  FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRK-SFFA 1033
            FVQRMDM+VVK DLPPKTVFV+ VKLS LQR+LYKRFLD+HGFTND+VS++KIRK  FFA
Sbjct: 984  FVQRMDMSVVKNDLPPKTVFVMAVKLSSLQRKLYKRFLDVHGFTNDKVSSDKIRKRCFFA 1043

Query: 1034 GYQALAQIWNHPGILQLTK-DKGYPSRED------AEDSSSDENMDYNVVIGEKPRNMND 1086
            GYQALAQIWNHPGILQLTK +K Y  RED      A+DSSSD+N+DYN V+GEK RN N+
Sbjct: 1044 GYQALAQIWNHPGILQLTKEEKDYARREDGVENFLADDSSSDDNIDYNTVLGEKVRNKNE 1103

Query: 1087 FLQGKNDDGFFQKD--WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSI 1144
              QGK D G +QK   WWNDLLHE+ YKE+DYSGKMVLLLDILTMC+++GDK+LVFSQS+
Sbjct: 1104 IQQGKVDSGLYQKKSGWWNDLLHENNYKEVDYSGKMVLLLDILTMCADVGDKALVFSQSL 1163

Query: 1145 PTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTL 1204
             TLDLIE+YLSKL R GK+GK WK+GKDWYRLDGRTE SERQKLVERFN+PLNKRVKCTL
Sbjct: 1164 STLDLIEYYLSKLSRQGKKGKCWKQGKDWYRLDGRTEGSERQKLVERFNDPLNKRVKCTL 1223

Query: 1205 ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEK 1264
            ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEK
Sbjct: 1224 ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEK 1283

Query: 1265 IYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNT 1324
            IYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLF+FGDDENPD L    KE    ++QN 
Sbjct: 1284 IYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFDFGDDENPDILPERGKEEEHTTNQNM 1343

Query: 1325 NC----ALKHKLPLSHEGC-SDKLMESLLGKHHPRCAVN 1358
                  +LK KL LSH  C SDKLMESLL +H+PR   N
Sbjct: 1344 TGQVGNSLKDKLSLSHGSCSSDKLMESLLVRHYPRWIAN 1382


>gi|224125738|ref|XP_002319663.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222858039|gb|EEE95586.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 1404

 Score = 1809 bits (4685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 930/1322 (70%), Positives = 1074/1322 (81%), Gaps = 72/1322 (5%)

Query: 46   EEHLTEEEIEELIAEFLEVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVE 105
            +E LT++E+EEL+AEFLEVESKAAEAQEALE ESL K++++VREELA++L GDDLEAAVE
Sbjct: 1    QEPLTDQEVEELVAEFLEVESKAAEAQEALEKESLAKVESDVREELARSLQGDDLEAAVE 60

Query: 106  DEMTVYKEQWEAALDELETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAH 165
            DEM  ++E+WE  LDELETES HLLEQLDG GIELP+LY+ IE+Q PN CCTEAWKRRAH
Sbjct: 61   DEMATFREEWENVLDELETESYHLLEQLDGTGIELPNLYKWIESQAPNSCCTEAWKRRAH 120

Query: 166  WVGSQVTSEMRESIAGAEDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVS 225
            WVG+Q+T E  +++A AE +LQ  RPVRR+HGKLLEEGASGFLQKK+A DGSE    E  
Sbjct: 121  WVGTQMTKETTDTVADAEKYLQIHRPVRRKHGKLLEEGASGFLQKKLAMDGSE-AIAENR 179

Query: 226  DINWNSVNKIFSGDVSEKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDG 285
            +++W S+ K+FS   SE  A+FGSKHWASVYLA+TPQ+AA MGLKFPGV+EVEEIED+DG
Sbjct: 180  EVDWASMKKLFSTSSSEDVASFGSKHWASVYLANTPQEAALMGLKFPGVNEVEEIEDIDG 239

Query: 286  NSDDPFVADAIANEKELALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEI 345
            NS DPFVA+AIANEKEL LSEEQRK +RKVKEEDDA +D+KLQL LK+RR  K  KQK  
Sbjct: 240  NSTDPFVAEAIANEKELVLSEEQRKNYRKVKEEDDAKIDQKLQLRLKQRRRLKRCKQK-- 297

Query: 346  GSVDWTIEDSAVETRPLVDASKSLSNKKTDDGDMPGNNNEVALQNLETGVLESSVKERSL 405
                                            D+  N+ ++ ++ L              
Sbjct: 298  --------------------------------DVCENSGDLDMEQL-------------- 311

Query: 406  SNGISSVSDSALP--DSSELRGIKRSNESEEPNSEKKRSRTIIIGSD-EADVVKDEC--S 460
                 S S+S  P  D+SE R  KR NESE+ +   K+ RT+II SD EAD+++D+    
Sbjct: 312  ----MSESNSVFPESDASEPRRSKRPNESEDLSINNKKIRTVIIDSDNEADILEDKSVHG 367

Query: 461  TKLEDHSVSPENINDAATDNSLHSQSLSEKFYCTACNNVAIEVHPHPILNVIVCKDCKCL 520
             K+ED S   ENI D +   +  SQ  SEKF CTAC+ VA+EVH HP+L VIVCKDCK L
Sbjct: 368  IKVEDQSTLLENIGDPSAGCN-PSQGSSEKFQCTACDKVAVEVHSHPLLKVIVCKDCKFL 426

Query: 521  LEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQ 580
            +E+KMHVKD DCSECYC WCG+++DLVSC+SC+TLFCT C+KRNI E  L  +V  S WQ
Sbjct: 427  MEEKMHVKDPDCSECYCGWCGKNNDLVSCRSCRTLFCTACIKRNIGEEYLY-KVPVSGWQ 485

Query: 581  CCCCSPSLLKRLTSELGRAMGSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILD 640
            CCCCSPSLL+RLTS+L +AMGS +++VSSS+SDS++SD ++ + I  KRK++KKIRRI+D
Sbjct: 486  CCCCSPSLLQRLTSQLEKAMGSGDIMVSSSDSDSDSSDTNDGVTISSKRKKQKKIRRIID 545

Query: 641  DAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITG 700
            DAELGEETKRKIAIEKERQERLKSL+V+FS KSK+MN  +  G+L  GAS+EV+GDA TG
Sbjct: 546  DAELGEETKRKIAIEKERQERLKSLKVKFSDKSKMMNFASCSGNLPEGASVEVIGDATTG 605

Query: 701  YIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHT 760
            YIVNV REKGEEAVRIP S+S+KLKAHQV GIRF+WENIIQSIRKVKSGD GLGCILAHT
Sbjct: 606  YIVNVAREKGEEAVRIPPSLSSKLKAHQVAGIRFLWENIIQSIRKVKSGDNGLGCILAHT 665

Query: 761  MGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE 820
            MGLGKTFQVIAFLYTAMR V+LGLRTALIVTPVNVLHNW++EFMKW PSE+KP+RVFMLE
Sbjct: 666  MGLGKTFQVIAFLYTAMRGVDLGLRTALIVTPVNVLHNWRKEFMKWTPSEVKPIRVFMLE 725

Query: 821  DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 880
            DVSR    ELLAKWRAKGGVFLIGY+AFRNLS GK+VK+RNMARE+C ALQDGPDILVCD
Sbjct: 726  DVSR--FLELLAKWRAKGGVFLIGYSAFRNLSLGKNVKERNMAREMCSALQDGPDILVCD 783

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            EAH+IKNTRA+TTQALK VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR
Sbjct: 784  EAHIIKNTRAETTQALKLVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 843

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKL 1000
            FQNPIENGQHTNST +DVKIMNQRSHILYEQLKGFVQRMDM+VVKKDLPPKTVFV+ VKL
Sbjct: 844  FQNPIENGQHTNSTVDDVKIMNQRSHILYEQLKGFVQRMDMSVVKKDLPPKTVFVVAVKL 903

Query: 1001 SPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE 1060
            SPLQR+LYKRFLD+HGFTN R SNEK  KSFFAGYQALAQIWNHPGILQL K + Y    
Sbjct: 904  SPLQRKLYKRFLDVHGFTNGRASNEKTSKSFFAGYQALAQIWNHPGILQLRKGREYVGNV 963

Query: 1061 D---AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
            +   A+D SSDEN+DYN ++   P +    +  + D      DWWNDLL E+ YKE+DYS
Sbjct: 964  ENFLADDCSSDENVDYNTIVEGTPFHHFIHIACQFDPSVV--DWWNDLLLENNYKEVDYS 1021

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKMVLLLDIL M S++GDK+LVF+QSIPTLDLIE YLS+LPR GK+GK W+KGKDWYRLD
Sbjct: 1022 GKMVLLLDILVMSSDVGDKTLVFTQSIPTLDLIELYLSRLPRLGKKGKFWRKGKDWYRLD 1081

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            GRTESSERQ+LVERFN+P NKRVKCTLISTRAGSLGINL++ANRV+IVDGSWNPTYDLQA
Sbjct: 1082 GRTESSERQRLVERFNDPKNKRVKCTLISTRAGSLGINLYAANRVVIVDGSWNPTYDLQA 1141

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
            IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV+RTIS+EEMLHL
Sbjct: 1142 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEMLHL 1201

Query: 1298 FEFGDDENPDPLTAVSKENGQGSSQN----TNCALKHKLPLSHEGC-SDKLMESLLGKHH 1352
            FEFGDDEN D L  + +E  Q  ++N    T  +LK     SH  C SDK+MESL+GKH 
Sbjct: 1202 FEFGDDENSDTLIDIGQEYRQADTRNISSQTANSLKQNASRSHGSCASDKVMESLVGKHR 1261

Query: 1353 PR 1354
             R
Sbjct: 1262 QR 1263


>gi|356574892|ref|XP_003555577.1| PREDICTED: transcriptional regulator ATRX-like [Glycine max]
          Length = 1485

 Score = 1800 bits (4663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 965/1386 (69%), Positives = 1105/1386 (79%), Gaps = 55/1386 (3%)

Query: 7    EDEKHEEVEDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEFLEVES 66
            E +  +EV DIES S  S   DS+ +E  +   DDG+ L E LTEEEI++LI+E LEVES
Sbjct: 2    EGKTEDEVVDIESASSGSSNDDSDDEESLVPEIDDGMRLGESLTEEEIQDLISELLEVES 61

Query: 67   KAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDELETES 126
            KAAEAQEALE ESL K+++EVR+EL Q L GDDLE AV DEM  +KE+WEA LD+LETES
Sbjct: 62   KAAEAQEALEEESLSKVESEVRQELKQNLQGDDLETAVADEMATFKEEWEAVLDDLETES 121

Query: 127  AHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGAEDFL 186
            AHLLEQLDGAGIELPSLY+LIE + PN C TEAWK+R HWVGS  T+E+ ESIA AE  L
Sbjct: 122  AHLLEQLDGAGIELPSLYKLIEREAPNVCSTEAWKKRNHWVGSLATAEISESIADAEKHL 181

Query: 187  QTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVSEKCAA 246
            Q  RPVRRRHGKLLEEGASGFLQK++ ++  E    E    +W+  NKI S D S   A+
Sbjct: 182  QVNRPVRRRHGKLLEEGASGFLQKRLCDESQEPVKNEG---DWDLFNKIVS-DGSGTDAS 237

Query: 247  FGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKELALSE 306
            FGSKHWASVYLASTPQQAA MGLKFPGVDEVEEI+DVDGNS DPF+A AIANE+EL LS+
Sbjct: 238  FGSKHWASVYLASTPQQAALMGLKFPGVDEVEEIDDVDGNSTDPFIAAAIANERELDLSD 297

Query: 307  EQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRPLVD-A 365
            EQR++F+KVKEEDDA +DRKLQ+ LK RR ++ SKQ+E+ S    + ++ ++    VD  
Sbjct: 298  EQRRQFKKVKEEDDAIVDRKLQIRLKHRRQKRKSKQREM-STPMLLTENHIQKPSFVDNL 356

Query: 366  SKSLSNKKTDDGDM---PGNNNEVALQNLETGVLESSV---KERSLSNGISSVSDSALPD 419
            S +++   +DDG +    G +  V ++  +  V ++S    KE+  S G        L D
Sbjct: 357  SPAVNEGTSDDGKIVSDSGKDACVLMEADKIKVFDASHHVDKEKLTSTG-------GLSD 409

Query: 420  SSELRGIKRSNESEEPNSEKKRSRTIIIGSD-EADVVKD--ECSTKLEDHSVSPENINDA 476
              E RGIKR N S E +++ K+ R ++I S+ EA+V ++  +C+T+     V  +  N+ 
Sbjct: 410  DIEQRGIKRVN-SGELDADNKKCRIVVIDSNNEAEVTENKLDCNTQ----EVKEDLCNNG 464

Query: 477  ATDNSLHSQSLSEKFYCTACNNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDA--DCSE 534
                SL S+ L EKF+CT C+ VA+EVHPHP L VI C DC CLL++K H KD   DCSE
Sbjct: 465  GA--SLPSECLDEKFWCTVCDKVALEVHPHPFLKVITCGDCNCLLKEKTHKKDQGQDCSE 522

Query: 535  CYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTS 594
             YC WCG SS+LV CK CK LFCT C+K+NI    L   V+ + W CCCC P+LL++L+ 
Sbjct: 523  GYCTWCGGSSELVCCKLCKILFCTKCLKKNIGVE-LVPGVEDTSWHCCCCHPNLLQKLSL 581

Query: 595  ELGRAMGSENLIVSSSESDSENSD------------ADNNLKIGGKRKQKKKIRRILDDA 642
            +L +A+G+ +LIVSSS SDS++SD            A  N+ I  KR+ KKKIRRILDDA
Sbjct: 582  QLAKAVGAADLIVSSSGSDSDSSDDSDNSDDSDDSDAKVNVTISSKRRHKKKIRRILDDA 641

Query: 643  ELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYI 702
            ELGEETKRKIAIEKERQERLKSL+ QFS+ S  M+S   +G+LS  AS+EVLGDA+ GYI
Sbjct: 642  ELGEETKRKIAIEKERQERLKSLRGQFSASSFEMSSDGCNGNLSESASVEVLGDAVAGYI 701

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            VNVVREKGEEAVRIP SISAKLKAHQ+ GIRFMWENIIQSIRKVKSGDKGLGCILAHTMG
Sbjct: 702  VNVVREKGEEAVRIPPSISAKLKAHQITGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 761

Query: 763  LGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV 822
            LGKTFQVIAFLYTAMR V+LGLRT LIVTPVNVLHNW+QEF+KWRPSELKPLRVFMLEDV
Sbjct: 762  LGKTFQVIAFLYTAMRCVDLGLRTVLIVTPVNVLHNWRQEFIKWRPSELKPLRVFMLEDV 821

Query: 823  SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
            SRDRRAELLAKWR+KGGVFLIGY AFRNLSFGKHVKDR+MAREICHALQDGPDILVCDEA
Sbjct: 822  SRDRRAELLAKWRSKGGVFLIGYAAFRNLSFGKHVKDRHMAREICHALQDGPDILVCDEA 881

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            HMIKNT+AD TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ
Sbjct: 882  HMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 941

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
            NPIENGQHTNST  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP
Sbjct: 942  NPIENGQHTNSTLIDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1001

Query: 1003 LQRRLYKRFLDLHGFTNDRVSNEKIRK-SFFAGYQALAQIWNHPGILQLTKD-KGYPSRE 1060
            LQR+LYKRFLD+HGFT  +V  E +RK  FFAGYQALA+IWNHPGILQLTK+ K Y   E
Sbjct: 1002 LQRKLYKRFLDVHGFTT-QVHPEMLRKRCFFAGYQALARIWNHPGILQLTKEVKDYVKHE 1060

Query: 1061 DA------EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
            DA      +DS SDEN DYNV+ GEK R  ND LQ K+D+GFF K WWNDLLH   YKE+
Sbjct: 1061 DAVENFLVDDSYSDENSDYNVLAGEKMRYGNDLLQRKDDNGFFLKGWWNDLLHGKIYKEI 1120

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
            D+SGKMVLL++ILTM S++GDK LVFSQSIPTLDLIE YLS++PR GKQGK WKKGKDWY
Sbjct: 1121 DHSGKMVLLMEILTMSSDVGDKVLVFSQSIPTLDLIELYLSRIPRRGKQGKFWKKGKDWY 1180

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH+ANRV+IVDGSWNPTYD
Sbjct: 1181 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYD 1240

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            LQAIYR+WRYGQ KPVFAYRL+AHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM
Sbjct: 1241 LQAIYRSWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1300

Query: 1295 LHLFEFGDDENPDPLTAVSKEN-GQGSSQNTNCALKHKLPLSH-EGCSDKLMESLLGKHH 1352
            LHLFE GDD+NP+ L  +S+EN  Q +      +LKH  P S+    SDKLMESLL KHH
Sbjct: 1301 LHLFELGDDDNPETLADLSQENEHQDNPILVGHSLKHTAPHSNGSSYSDKLMESLLSKHH 1360

Query: 1353 PRCAVN 1358
            PR   N
Sbjct: 1361 PRWIAN 1366


>gi|334182391|ref|NP_001184937.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana]
 gi|334182393|ref|NP_001184938.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana]
 gi|334182395|ref|NP_001184939.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana]
 gi|332190193|gb|AEE28314.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana]
 gi|332190194|gb|AEE28315.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana]
 gi|332190195|gb|AEE28316.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana]
          Length = 1479

 Score = 1547 bits (4005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 853/1374 (62%), Positives = 1019/1374 (74%), Gaps = 105/1374 (7%)

Query: 2    EDKHSEDEKHEEVEDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEF 61
            E+ +  ++K EE++D  S S +S   +S+ DE  +S +DD L LE+ L+EEEI+ELI++ 
Sbjct: 62   ENNNQGEQKDEEMQDASSRS-ESSDFNSDEDEQILSRRDDELDLEKPLSEEEIDELISDL 120

Query: 62   LEVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDE 121
            L VESKAAEAQEALE ESL K+++EVREELAQAL GD+L+ AV  EM  +K++WEA LDE
Sbjct: 121  LAVESKAAEAQEALEKESLSKVESEVREELAQALRGDELDEAVAAEMMTFKDEWEATLDE 180

Query: 122  LETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAG 181
            LETESA LLEQLDGAGIELP LY +IE+Q PNGC TEAWK+RAHWVG+QVT E  ES+A 
Sbjct: 181  LETESATLLEQLDGAGIELPKLYEMIESQAPNGCYTEAWKQRAHWVGTQVTKETVESLAN 240

Query: 182  AEDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVS 241
            AE FL T RPVR+RHGKLLEEGASGFL+KK+A+   +      S+++W+S+NK+FS +  
Sbjct: 241  AERFLHTHRPVRKRHGKLLEEGASGFLEKKLADGAVKESLAGTSELDWSSLNKVFS-EKR 299

Query: 242  EKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKE 301
            ++  +FGSK WASVYLASTP QAAAMGL+FPGV+EVEEIE++D +  DPF+ADAI NE+E
Sbjct: 300  DESVSFGSKQWASVYLASTPHQAAAMGLEFPGVNEVEEIEEIDASLADPFLADAIDNERE 359

Query: 302  LALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRP 361
            LAL+EEQ+  + +VKEEDD   DR LQL LKR+R +K SKQ  I      ++D +V    
Sbjct: 360  LALTEEQKTNYIRVKEEDDITCDRVLQLRLKRKRRKKRSKQV-IRCAAENMDDDSV---- 414

Query: 362  LVDASKSLSNKKTDDGDMPGNNNEVALQNLETGVLESSVKERSLSNGISSVSDSALPDSS 421
             +D + +  N   D    P  + +V   N E  + E         NG  S SD       
Sbjct: 415  YLDGNNTTPNFAKDQVKSPETSTQV--HNSEVNIEE---------NGNFSNSD------- 456

Query: 422  ELRGIKRSNESEEPNSEKKRSRTIIIGSDEADVVKDECSTKLEDHSVSPEN------IND 475
                + +   S   N + KR                       D S +P N       N 
Sbjct: 457  ----VDKMTPSTHINVDAKR-----------------------DDSQNPANNFRCTACNK 489

Query: 476  AATDNSLHSQSLSEKFYCTACNNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSEC 535
             A +  +HS  L E   C  C                     K  +E ++   D D  E 
Sbjct: 490  VAVE--VHSHPLLEVIVCMDC---------------------KRSIEDRVSKVD-DSLER 525

Query: 536  YCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSE 595
            +C WCG  +DL+ C++C+ LFC +C+KRNI E  +S E Q+S W CCCCSP  L+RLT E
Sbjct: 526  HCEWCGHIADLIDCRTCEKLFCASCIKRNIGEEYMS-EAQSSGWDCCCCSPIPLQRLTLE 584

Query: 596  LGRAMGSENLI--------VSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEE 647
            L +AM  +  I         SSS+++S ++DAD N+ I  K+K KKKIRRI+DDAELG++
Sbjct: 585  LEKAMRDKKSIELSSDSSSDSSSDNNSVDTDADVNVTISSKKKSKKKIRRIIDDAELGKD 644

Query: 648  TKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVR 707
            T+ KIAIEK RQERL+SL  QFS++ K ++S+     +  GA +EVLGDA +GYIVNVVR
Sbjct: 645  TRTKIAIEKARQERLRSL--QFSARYKTISSMGDVKSIPEGAEVEVLGDAHSGYIVNVVR 702

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E GEEAVR+P SISAKLK HQV GIRFMWENIIQSI +VKSGDKGLGCILAHTMGLGKTF
Sbjct: 703  EIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTF 762

Query: 768  QVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR 827
            QVIAFLYTAMR V+LGL+TALIVTPVNVLHNW+ EF KW PSE+KPLR+FML DVSR+RR
Sbjct: 763  QVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERR 822

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
             +LL KWR KGGVFL+GYT FRNLS G+ VKD N AR IC+AL+DGPDILVCDEAH+IKN
Sbjct: 823  FDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKN 882

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
            T+ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS EFRNRFQNPIEN
Sbjct: 883  TKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIEN 942

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            GQH NST+EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI+VKLSPLQR L
Sbjct: 943  GQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRIL 1002

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA----- 1062
            Y+RFL+L+GF++ R ++E++RK+FFA YQ LAQI NHPGI QL  +     R  +     
Sbjct: 1003 YQRFLELYGFSDGR-TDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIP 1061

Query: 1063 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 1122
            +D SSDEN+DYN+V GEK R MND LQ K  DG+ QKDWW DLL ++ YK  D+SGKM+L
Sbjct: 1062 DDCSSDENIDYNMVTGEKQRTMND-LQDKV-DGYLQKDWWVDLLQKNNYKVSDFSGKMIL 1119

Query: 1123 LLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTES 1182
            LLDIL+M +++GDK+LVFSQSIPTLDLIE YLS++PR GKQGK WKKGKDWYR+DG+TES
Sbjct: 1120 LLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTES 1179

Query: 1183 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1242
            SERQKLV+RFNEP NKRVKCTLISTRAGSLGINL++ANRVIIVDGSWNPTYDLQAI+RAW
Sbjct: 1180 SERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAW 1239

Query: 1243 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF-G 1301
            RYGQ KPVFAYRLMA GT+EEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF  
Sbjct: 1240 RYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFDD 1299

Query: 1302 DDENPDPLTAVSKENGQGSSQNTNCAL--KHKLPLSHEGCSDKLMESLLGKHHP 1353
            DDE  + +T +SK+N  G S     A+    K  LS  G  DKLME+LL +H P
Sbjct: 1300 DDEKSEAVTEISKQNEAGHSNLVEQAILWTKKATLSRVG-GDKLMENLLQRHGP 1352


>gi|9802554|gb|AAF99756.1|AC003981_6 F22O13.8 [Arabidopsis thaliana]
          Length = 1471

 Score = 1531 bits (3963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 848/1374 (61%), Positives = 1015/1374 (73%), Gaps = 109/1374 (7%)

Query: 2    EDKHSEDEKHEEVEDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEF 61
            E+ +  ++K EE++D  S S +S   +S+ DE  +S +DD L LE+ L+EEEI+ELI++ 
Sbjct: 62   ENNNQGEQKDEEMQDASSRS-ESSDFNSDEDEQILSRRDDELDLEKPLSEEEIDELISDL 120

Query: 62   LEVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDE 121
            L VESKAAEAQEALE ESL K+++EVREELAQAL GD+L+ AV  EM  +K++WEA LDE
Sbjct: 121  LAVESKAAEAQEALEKESLSKVESEVREELAQALRGDELDEAVAAEMMTFKDEWEATLDE 180

Query: 122  LETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAG 181
            LETESA LLEQLDGAGIELP LY +IE+Q PNGC TEAWK+RAHWVG+QVT E  ES+A 
Sbjct: 181  LETESATLLEQLDGAGIELPKLYEMIESQAPNGCYTEAWKQRAHWVGTQVTKETVESLAN 240

Query: 182  AEDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVS 241
            AE FL T RPVR+RHGKLLEEGASGFL+KK+A+   +      S+++W+S+NK+FS +  
Sbjct: 241  AERFLHTHRPVRKRHGKLLEEGASGFLEKKLADGAVKESLAGTSELDWSSLNKVFS-EKR 299

Query: 242  EKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKE 301
            ++  +FGSK WASVYLASTP QAAAMGL+FPGV+EVEEIE++D +  DPF+ADAI NE+E
Sbjct: 300  DESVSFGSKQWASVYLASTPHQAAAMGLEFPGVNEVEEIEEIDASLADPFLADAIDNERE 359

Query: 302  LALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRP 361
            LAL+EEQ+  + +VKEEDD   DR LQL LKR+R +K SKQ  I      ++D +V    
Sbjct: 360  LALTEEQKTNYIRVKEEDDITCDRVLQLRLKRKRRKKRSKQV-IRCAAENMDDDSV---- 414

Query: 362  LVDASKSLSNKKTDDGDMPGNNNEVALQNLETGVLESSVKERSLSNGISSVSDSALPDSS 421
             +D + +  N   D    P  + +V   N E  + E         NG  S SD       
Sbjct: 415  YLDGNNTTPNFAKDQVKSPETSTQV--HNSEVNIEE---------NGNFSNSD------- 456

Query: 422  ELRGIKRSNESEEPNSEKKRSRTIIIGSDEADVVKDECSTKLEDHSVSPEN------IND 475
                + +   S   N + KR                       D S +P N       N 
Sbjct: 457  ----VDKMTPSTHINVDAKR-----------------------DDSQNPANNFRCTACNK 489

Query: 476  AATDNSLHSQSLSEKFYCTACNNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSEC 535
             A +  +HS  L E   C  C                     K  +E ++   D D  E 
Sbjct: 490  VAVE--VHSHPLLEVIVCMDC---------------------KRSIEDRVSKVD-DSLER 525

Query: 536  YCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSE 595
            +C WCG  +DL+ C++C+ LFC +C+KRNI E  +S E Q+S W CCCCSP  L+RLT E
Sbjct: 526  HCEWCGHIADLIDCRTCEKLFCASCIKRNIGEEYMS-EAQSSGWDCCCCSPIPLQRLTLE 584

Query: 596  LGRAMGSENLI--------VSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEE 647
            L +AM  +  I         SSS+++S ++DAD N+ I  K+K KKKIRRI+DDAELG++
Sbjct: 585  LEKAMRDKKSIELSSDSSSDSSSDNNSVDTDADVNVTISSKKKSKKKIRRIIDDAELGKD 644

Query: 648  TKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVR 707
            T+ KIAIEK RQERL+SL  QFS++ K ++S+     +  GA +EVLGDA +GYIVNVVR
Sbjct: 645  TRTKIAIEKARQERLRSL--QFSARYKTISSMGDVKSIPEGAEVEVLGDAHSGYIVNVVR 702

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E GEEAVR+P SISAKLK HQV GIRFMWENIIQSI +VKSGDKGLGCILAHTMGLGKTF
Sbjct: 703  EIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTF 762

Query: 768  QVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR 827
            QVIAFLYTAMR V+LGL+TALIVTPVNVLHNW+ EF KW PSE+KPLR+FML DVSR+RR
Sbjct: 763  QVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERR 822

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
             +LL KWR KGGVFL+GYT FRNLS G+ VKD N AR IC+AL+DGPDILVCDEAH+IKN
Sbjct: 823  FDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKN 882

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
            T+ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS +    FQNPIEN
Sbjct: 883  TKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPD----FQNPIEN 938

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            GQH NST+EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI+VKLSPLQR L
Sbjct: 939  GQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRIL 998

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA----- 1062
            Y+RFL+L+GF++ R ++E++RK+FFA YQ LAQI NHPGI QL  +     R  +     
Sbjct: 999  YQRFLELYGFSDGR-TDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIP 1057

Query: 1063 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 1122
            +D SSDEN+DYN+V GEK R MND LQ K  DG+ QKDWW DLL ++ YK  D+SGKM+L
Sbjct: 1058 DDCSSDENIDYNMVTGEKQRTMND-LQDKV-DGYLQKDWWVDLLQKNNYKVSDFSGKMIL 1115

Query: 1123 LLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTES 1182
            LLDIL+M +++GDK+LVFSQSIPTLDLIE YLS++PR GKQGK WKKGKDWYR+DG+TES
Sbjct: 1116 LLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTES 1175

Query: 1183 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1242
            SERQKLV+RFNEP NKRVKCTLISTRAGSLGINL++ANRVIIVDGSWNPTYDLQAI+RAW
Sbjct: 1176 SERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAW 1235

Query: 1243 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF-G 1301
            RYGQ KPVFAYRLMA GT+EEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF  
Sbjct: 1236 RYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFDD 1295

Query: 1302 DDENPDPLTAVSKENGQGSSQNTNCAL--KHKLPLSHEGCSDKLMESLLGKHHP 1353
            DDE  + +T +SK+N  G S     A+    K  LS  G  DKLME+LL +H P
Sbjct: 1296 DDEKSEAVTEISKQNEAGHSNLVEQAILWTKKATLSRVG-GDKLMENLLQRHGP 1348


>gi|255561985|ref|XP_002522001.1| conserved hypothetical protein [Ricinus communis]
 gi|223538805|gb|EEF40405.1| conserved hypothetical protein [Ricinus communis]
          Length = 1447

 Score = 1530 bits (3960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 754/951 (79%), Positives = 839/951 (88%), Gaps = 16/951 (1%)

Query: 422  ELRGIKRSNESEEPNSEKKRSRTIIIGSD-EADVVKDECST--KLEDHSVSPENINDAAT 478
            E R  KR NES EP ++ K+ RT+II SD EAD + +  S+  ++   S   ENI ++  
Sbjct: 363  ESRKSKRPNESGEPTNDAKKIRTVIIDSDDEADGINESVSSANRVVVESTLQENIGESGA 422

Query: 479  DNSLHSQSLSEKFYCTACNNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCV 538
            D  L SQ ++E+F+CT C+ +  EVH HP+L VI+CKDCKC +EKKMHVKD +CSECYC 
Sbjct: 423  DGHL-SQCVNEEFHCTVCHKICFEVHSHPLLKVIICKDCKCSIEKKMHVKDPECSECYCA 481

Query: 539  WCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSELGR 598
            WCGRS+DLVSCKSCKTLFCTTCVKRNI E CLS E Q+S WQCCCCSP+ L+RLT EL +
Sbjct: 482  WCGRSNDLVSCKSCKTLFCTTCVKRNIGEECLS-EAQSSGWQCCCCSPNQLQRLTLELEK 540

Query: 599  AMGSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKER 658
            AMGSE+L+ +SS+S+SENSDAD ++ I  K K+KKKIRRILDDAELGEET+RKIAIEKER
Sbjct: 541  AMGSEDLMDTSSDSESENSDADIHVAIRKKNKKKKKIRRILDDAELGEETQRKIAIEKER 600

Query: 659  QERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPS 718
            QERLKSL+VQF+ KSK+MN+ + +G+L  GAS EVLGDA TGYIVNVVREKGEEAVRIP 
Sbjct: 601  QERLKSLKVQFTDKSKMMNTASCNGNLPEGASFEVLGDAATGYIVNVVREKGEEAVRIPP 660

Query: 719  SISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR 778
            SISAKLKAHQV GIRFMWENI+QSI KVKSGD+GLGCILAHTMGLGKTFQVIAFLYTAMR
Sbjct: 661  SISAKLKAHQVAGIRFMWENIVQSIGKVKSGDRGLGCILAHTMGLGKTFQVIAFLYTAMR 720

Query: 779  SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKG 838
            S++LGLRTALIVTPVNVLHNW+QEFMKWRPSE KPLRVFMLEDVSRDRRAELLAKWRAKG
Sbjct: 721  SIDLGLRTALIVTPVNVLHNWRQEFMKWRPSETKPLRVFMLEDVSRDRRAELLAKWRAKG 780

Query: 839  GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQ 898
            GVFLIGYTAFRNLS GK+VKDRNMAREIC+ALQDGPDILVCDEAH+IKNTRADTTQALKQ
Sbjct: 781  GVFLIGYTAFRNLSLGKNVKDRNMAREICYALQDGPDILVCDEAHIIKNTRADTTQALKQ 840

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST+ DV
Sbjct: 841  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTANDV 900

Query: 959  KIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT 1018
            KIMNQRSHILYEQLKGFVQRMDM+VVKKDLPPKTVFVI VKLSPLQR+LYK+FLD+HGFT
Sbjct: 901  KIMNQRSHILYEQLKGFVQRMDMSVVKKDLPPKTVFVIAVKLSPLQRKLYKKFLDVHGFT 960

Query: 1019 NDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED------AEDSSSDENMD 1072
             D VS+EKIRKSFFAGYQALAQIWNHPGILQL KD+ Y +RE+      A++SSSDEN+D
Sbjct: 961  KDIVSSEKIRKSFFAGYQALAQIWNHPGILQLRKDRDYVTREETVDNFIADESSSDENLD 1020

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 1132
             N +IGEKPRN NDF+Q K+D+GFFQK WWNDLL E+ YKELDYSGKMVLLLDILT  S+
Sbjct: 1021 CNTIIGEKPRNANDFVQRKSDNGFFQKGWWNDLLQENNYKELDYSGKMVLLLDILTASSH 1080

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
            +GDK+LVFSQSIPTLDLIE YLS+L R GK+GKLW+KGKDWYRLDGRTESSERQ+LVE+F
Sbjct: 1081 VGDKALVFSQSIPTLDLIELYLSRLSRHGKKGKLWRKGKDWYRLDGRTESSERQRLVEKF 1140

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N+P NKRVKCTLISTRAGSLGINLH+ANRV+IVDGSWNPTYDLQAI+RAWRYGQTKPVFA
Sbjct: 1141 NDPENKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIFRAWRYGQTKPVFA 1200

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAV 1312
            YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTIS+EEMLHLF+FGD+EN DPL  V
Sbjct: 1201 YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISREEMLHLFDFGDEENSDPLAEV 1260

Query: 1313 SKENGQGSSQN----TNCALKHKLPLSHEGC-SDKLMESLLGKHHPRCAVN 1358
             +E+ Q   QN       +LKHK PLSH  C SDKLMESLLGKHHPR   N
Sbjct: 1261 GEEDKQVDDQNMSYKVGSSLKHKAPLSHVSCSSDKLMESLLGKHHPRWIAN 1311



 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/338 (69%), Positives = 276/338 (81%), Gaps = 14/338 (4%)

Query: 8   DEKHEEVEDIE--SDSGDSFIVDSESDEPSISGQDDGLHLE------------EHLTEEE 53
           +EKH++V+D+E  S        D + DEPS SGQD+G+HLE            E LTE+E
Sbjct: 2   EEKHKQVDDVEIVSSDSFIVDSDDDDDEPSTSGQDNGMHLEASHQNSFSCNFREPLTEQE 61

Query: 54  IEELIAEFLEVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKE 113
           +EEL+AE LEVESKAAEAQEALE ESL K+++EVREEL Q+LHGDDLEAAVEDEMT +KE
Sbjct: 62  VEELVAELLEVESKAAEAQEALEKESLSKVESEVREELGQSLHGDDLEAAVEDEMTAFKE 121

Query: 114 QWEAALDELETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTS 173
           +WE  LDELETESAHLLEQLDGAGIELPSLY+ IE Q PNGC TEAWK RAHWVGSQVTS
Sbjct: 122 EWETVLDELETESAHLLEQLDGAGIELPSLYKWIERQAPNGCQTEAWKSRAHWVGSQVTS 181

Query: 174 EMRESIAGAEDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVN 233
           E+ E++A AE +LQ+ RPVRRRHGKLLEEGASGFL KK++ DG+++   E  DI+W+S+N
Sbjct: 182 EITEAVADAEKYLQSHRPVRRRHGKLLEEGASGFLDKKLSIDGTKDNVAENGDIDWDSLN 241

Query: 234 KIFSGDVSEKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVA 293
           K+FS    +  A+FGSKHWASVYLA+TPQ+AA MGLKFPGVDEVEEIED+DG S+DPF+A
Sbjct: 242 KLFSSGSCKDVASFGSKHWASVYLANTPQEAAEMGLKFPGVDEVEEIEDIDGCSNDPFIA 301

Query: 294 DAIANEKELALSEEQRKKFRKVKEEDDANMDRKLQLHL 331
            AIANEKEL LSEEQRK + KVKEEDDA +DRKLQLHL
Sbjct: 302 VAIANEKELILSEEQRKNYIKVKEEDDAIIDRKLQLHL 339


>gi|334182389|ref|NP_172336.4| DEAD-like helicase domain-containing protein [Arabidopsis thaliana]
 gi|332190192|gb|AEE28313.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana]
          Length = 1458

 Score = 1486 bits (3846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 834/1374 (60%), Positives = 997/1374 (72%), Gaps = 126/1374 (9%)

Query: 2    EDKHSEDEKHEEVEDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEF 61
            E+ +  ++K EE++D  S S +S   +S+ DE  +S +DD L LE+ L+EEEI+ELI++ 
Sbjct: 62   ENNNQGEQKDEEMQDASSRS-ESSDFNSDEDEQILSRRDDELDLEKPLSEEEIDELISDL 120

Query: 62   LEVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDE 121
            L VESKAAEAQEALE ESL K+++EVREELAQAL GD+L+ AV  EM  +K++WEA LDE
Sbjct: 121  LAVESKAAEAQEALEKESLSKVESEVREELAQALRGDELDEAVAAEMMTFKDEWEATLDE 180

Query: 122  LETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAG 181
            LETESA LLEQLDGAGIELP LY +IE+Q PNGC TEAWK+RAHWVG+QVT E  ES+A 
Sbjct: 181  LETESATLLEQLDGAGIELPKLYEMIESQAPNGCYTEAWKQRAHWVGTQVTKETVESLAN 240

Query: 182  AEDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVS 241
            AE FL T RPVR+RHGKLLEEGASGFL+KK+A+   +      S+++W+S+NK+FS +  
Sbjct: 241  AERFLHTHRPVRKRHGKLLEEGASGFLEKKLADGAVKESLAGTSELDWSSLNKVFS-EKR 299

Query: 242  EKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKE 301
            ++  +FGSK WASVYLASTP QAAAMGL+FPGV+EVEEIE++D +  DPF+ADAI NE+E
Sbjct: 300  DESVSFGSKQWASVYLASTPHQAAAMGLEFPGVNEVEEIEEIDASLADPFLADAIDNERE 359

Query: 302  LALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRP 361
            LAL+EEQ+  + +VKEEDD   DR LQL LKR+R +K SKQ  I      ++D +V    
Sbjct: 360  LALTEEQKTNYIRVKEEDDITCDRVLQLRLKRKRRKKRSKQV-IRCAAENMDDDSV---- 414

Query: 362  LVDASKSLSNKKTDDGDMPGNNNEVALQNLETGVLESSVKERSLSNGISSVSDSALPDSS 421
             +D + +  N   D    P  + +V   N E  + E         NG  S SD       
Sbjct: 415  YLDGNNTTPNFAKDQVKSPETSTQV--HNSEVNIEE---------NGNFSNSD------- 456

Query: 422  ELRGIKRSNESEEPNSEKKRSRTIIIGSDEADVVKDECSTKLEDHSVSPEN------IND 475
                + +   S   N + KR                       D S +P N       N 
Sbjct: 457  ----VDKMTPSTHINVDAKR-----------------------DDSQNPANNFRCTACNK 489

Query: 476  AATDNSLHSQSLSEKFYCTACNNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSEC 535
             A +  +HS  L E   C  C                     K  +E ++   D D  E 
Sbjct: 490  VAVE--VHSHPLLEVIVCMDC---------------------KRSIEDRVSKVD-DSLER 525

Query: 536  YCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSE 595
            +C WCG  +DL+ C++C+ LFC +C+KRNI E  +S E Q+S W CCCCSP  L+RLT E
Sbjct: 526  HCEWCGHIADLIDCRTCEKLFCASCIKRNIGEEYMS-EAQSSGWDCCCCSPIPLQRLTLE 584

Query: 596  LGRAMGSENLI--------VSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEE 647
            L +AM  +  I         SSS+++S ++DAD N+ I  K+K KKKIRRI+DDAELG++
Sbjct: 585  LEKAMRDKKSIELSSDSSSDSSSDNNSVDTDADVNVTISSKKKSKKKIRRIIDDAELGKD 644

Query: 648  TKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVR 707
            T+ KIAIEK RQERL+SL  QFS++ K ++S+     +  GA +EVLGDA +GYIVNVVR
Sbjct: 645  TRTKIAIEKARQERLRSL--QFSARYKTISSMGDVKSIPEGAEVEVLGDAHSGYIVNVVR 702

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E GEEAVR+P SISAKLK HQV GIRFMWENIIQSI +VKSGDKGLGCILAHTMGLGKTF
Sbjct: 703  EIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTF 762

Query: 768  QVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR 827
            QVIAFLYTAMR V+LGL+TALIVTPVNVLHNW+ EF KW PSE+KPLR+FML DVSR   
Sbjct: 763  QVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSR--- 819

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
                             Y  F   +F   VKD N AR IC+AL+DGPDILVCDEAH+IKN
Sbjct: 820  -----------------YKFFYERNFWG-VKDLNAARGICNALRDGPDILVCDEAHIIKN 861

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
            T+ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS EFRNRFQNPIEN
Sbjct: 862  TKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIEN 921

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            GQH NST+EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI+VKLSPLQR L
Sbjct: 922  GQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRIL 981

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA----- 1062
            Y+RFL+L+GF++ R ++E++RK+FFA YQ LAQI NHPGI QL  +     R  +     
Sbjct: 982  YQRFLELYGFSDGR-TDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIP 1040

Query: 1063 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 1122
            +D SSDEN+DYN+V GEK R MND LQ K  DG+ QKDWW DLL ++ YK  D+SGKM+L
Sbjct: 1041 DDCSSDENIDYNMVTGEKQRTMND-LQDKV-DGYLQKDWWVDLLQKNNYKVSDFSGKMIL 1098

Query: 1123 LLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTES 1182
            LLDIL+M +++GDK+LVFSQSIPTLDLIE YLS++PR GKQGK WKKGKDWYR+DG+TES
Sbjct: 1099 LLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTES 1158

Query: 1183 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1242
            SERQKLV+RFNEP NKRVKCTLISTRAGSLGINL++ANRVIIVDGSWNPTYDLQAI+RAW
Sbjct: 1159 SERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAW 1218

Query: 1243 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF-G 1301
            RYGQ KPVFAYRLMA GT+EEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF  
Sbjct: 1219 RYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFDD 1278

Query: 1302 DDENPDPLTAVSKENGQGSSQNTNCAL--KHKLPLSHEGCSDKLMESLLGKHHP 1353
            DDE  + +T +SK+N  G S     A+    K  LS  G  DKLME+LL +H P
Sbjct: 1279 DDEKSEAVTEISKQNEAGHSNLVEQAILWTKKATLSRVG-GDKLMENLLQRHGP 1331


>gi|449470320|ref|XP_004152865.1| PREDICTED: uncharacterized protein LOC101218346 [Cucumis sativus]
          Length = 1628

 Score = 1431 bits (3703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 736/1016 (72%), Positives = 830/1016 (81%), Gaps = 25/1016 (2%)

Query: 362  LVDASKSLSNKKTDDGDMPGNNNEVALQNLETGVLESSVK------ERSLSNGISSVSDS 415
            LVD    +S+ K D   M  +++E     ++  +   S        ERS+ +  +SV  S
Sbjct: 497  LVDCLNPVSDDKVDKCRMGLSDDENGDVKIKVDIPNGSDASSDIDMERSMEH-TASVLPS 555

Query: 416  ALPDSSELRGIKRSNESEEPNSEKKRSRTIIIGSDEADVVKDECSTKLEDHSVSPENIND 475
            A  +  E  G KR N+ EE  ++ K+SRT  + +DE   +K E S  L     + +N  D
Sbjct: 556  ASSNFVEPLGSKRLNDMEEVITQTKKSRTNGVHNDENSPMK-EHSALLNTICNTEQNDYD 614

Query: 476  AATDNSLHSQSLSEKFYCTACNNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSEC 535
            A   +SL S   +EK +CTAC+ V I+V+ HP L VIVC DCK +++ K +VK+ DCSEC
Sbjct: 615  A---DSLPSTCPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNVKEPDCSEC 671

Query: 536  YCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSE 595
            YC WCG ++DLVSCKSCKTLFCT C++RN+   CL  + QAS W CCCC PSLL+ LT++
Sbjct: 672  YCGWCGHNADLVSCKSCKTLFCTGCIRRNLGVECLL-KAQASGWHCCCCRPSLLQSLTTQ 730

Query: 596  LGRAMGSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIE 655
            L  A+GSE L  SSS+SDS+N +AD N+ I  KRK+KKKIRRILDDAELGE+TK+KIAIE
Sbjct: 731  LEEALGSEELTGSSSDSDSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTKKKIAIE 790

Query: 656  KERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVR 715
            KERQERLKSLQVQFSS SK+M+S    G+LS GAS+EVLGDA TGYIVNVVREKGEEA+R
Sbjct: 791  KERQERLKSLQVQFSSNSKMMSSAGFCGNLSEGASVEVLGDASTGYIVNVVREKGEEAIR 850

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP SIS+KLK HQ+ GIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT
Sbjct: 851  IPPSISSKLKTHQISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 910

Query: 776  AMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWR 835
            AMRS +LGLRTALIVTPVNVLHNW+QEF KW+PSELKPLR+FMLEDV R++RA LLAKWR
Sbjct: 911  AMRSADLGLRTALIVTPVNVLHNWRQEFFKWKPSELKPLRIFMLEDVPREKRAVLLAKWR 970

Query: 836  AKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQA 895
            AKGGVFLIGY+AFRNLS GKHVKDR MA+EICH LQDGPDILVCDEAHMIKNT+AD TQA
Sbjct: 971  AKGGVFLIGYSAFRNLSLGKHVKDRQMAKEICHILQDGPDILVCDEAHMIKNTKADITQA 1030

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 
Sbjct: 1031 LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTL 1090

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
            +DVKIMNQRSHILYEQLKGFVQRMDM VVKKDLPPKTVFVI+VKLSPLQR+LYKRFLD+H
Sbjct: 1091 DDVKIMNQRSHILYEQLKGFVQRMDMTVVKKDLPPKTVFVISVKLSPLQRKLYKRFLDVH 1150

Query: 1016 GFTNDRVSNEKIRK-SFFAGYQALAQIWNHPGILQLTK-DKGYPSRED------AEDSSS 1067
            GF N + S+E++RK SFFAGYQALAQIWNHPGILQLTK DK Y  RED      A DSSS
Sbjct: 1151 GFNNGKDSSEQLRKRSFFAGYQALAQIWNHPGILQLTKEDKYYVKREDAIENFLAGDSSS 1210

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
            DEN+D N+  G+KP N N   Q K   GFF KDW N LLH ++YKE+DY GKMVLLL+IL
Sbjct: 1211 DENIDSNIGTGDKPVNANGNHQDKFVSGFFVKDWSNGLLHANSYKEVDYGGKMVLLLEIL 1270

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
            TMCS +GDK+LVFSQSIPTLDLIEFYLS+LPR GK+GK WKKGKDWYRLDGRTESSERQK
Sbjct: 1271 TMCSELGDKALVFSQSIPTLDLIEFYLSRLPRRGKRGKFWKKGKDWYRLDGRTESSERQK 1330

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            +VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT
Sbjct: 1331 IVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1390

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPD 1307
            KPVFAYR +AHGTMEEKIYKRQVTKEGLAARVVDRQQV+RTIS+EEMLHLFEFGD+EN +
Sbjct: 1391 KPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEMLHLFEFGDEENLE 1450

Query: 1308 PLTAVSKENGQGSSQ----NTNCALKHKLPLSHEGC-SDKLMESLLGKHHPRCAVN 1358
              T + + NG  S Q    +    LK K PLSH  C SDKLME+LLGKHHPR   N
Sbjct: 1451 ASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGSCSSDKLMETLLGKHHPRWVAN 1506



 Score =  461 bits (1186), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/335 (69%), Positives = 273/335 (81%)

Query: 8   DEKHEEVEDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEFLEVESK 67
           +EKHE+V+D+ S SGDSFI DSE D PS SG+DD LHLEE LTE+EIE+L+AEFLEVESK
Sbjct: 2   EEKHEDVDDVGSASGDSFIDDSEDDGPSTSGKDDQLHLEEPLTEQEIEDLVAEFLEVESK 61

Query: 68  AAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDELETESA 127
           AAEAQEALE ESL K++ EVREELA  L+GDDLE A+ +EM  + E+WE  LDELE ESA
Sbjct: 62  AAEAQEALEKESLAKVEKEVREELALTLNGDDLETAIANEMAAFVEEWEVVLDELEIESA 121

Query: 128 HLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGAEDFLQ 187
           HLLEQLDGAGIELPSLY+LIE+Q  NGC TEAWK+R HWVGSQVT ++  S++ AE  LQ
Sbjct: 122 HLLEQLDGAGIELPSLYKLIESQASNGCFTEAWKKRIHWVGSQVTGDLLASVSDAEKTLQ 181

Query: 188 TERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVSEKCAAF 247
            ERPV RRHGKLLEEGASG+LQKK +    E  G E  +++W S+NK+FS    +    F
Sbjct: 182 IERPVMRRHGKLLEEGASGYLQKKFSTHEIEGIGTEKLEVDWGSLNKVFSEGSKDSDTLF 241

Query: 248 GSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKELALSEE 307
           GSK+WASVYLASTPQQAA MGLKFPGVDEVEEI+DVDG+S DPFVA AI NEKEL LSEE
Sbjct: 242 GSKNWASVYLASTPQQAAEMGLKFPGVDEVEEIDDVDGSSCDPFVAAAIENEKELDLSEE 301

Query: 308 QRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQ 342
           Q+K FRKVKEEDDA  DRKLQ+HLK++R++K  KQ
Sbjct: 302 QKKNFRKVKEEDDAIFDRKLQIHLKQKRNQKRCKQ 336


>gi|110289185|gb|ABB47753.2| SNF2 domain-containing protein, putative, expressed [Oryza sativa
            Japonica Group]
          Length = 1476

 Score = 1430 bits (3701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 780/1375 (56%), Positives = 962/1375 (69%), Gaps = 121/1375 (8%)

Query: 7    EDEKHEEV----EDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEFL 62
            E++ HEE     +D E+DS +  + +S++++ S S   +G + E  LT+EE+E LI EFL
Sbjct: 64   ENDLHEEASTTDDDSENDSYEYLLRESDNEQTSESDAGEGDN-EAPLTDEEVETLITEFL 122

Query: 63   EVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDEL 122
            + ESKAA+AQE+LE ESL K+++EVR EL+++L G++LE+AV  EM  YK++WE+ LD+L
Sbjct: 123  DAESKAAQAQESLEKESLEKIESEVRLELSESLQGNELESAVSTEMKQYKKEWESELDDL 182

Query: 123  ETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGA 182
            ET  A LLEQLD AG+ELPSLY+ IE+QVPN C TEAWK RAHW G QV  E  +SI  A
Sbjct: 183  ETHIAVLLEQLDAAGVELPSLYKSIESQVPNVCETEAWKNRAHWAGYQVPEEANKSIRKA 242

Query: 183  EDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIF-SGDVS 241
            +++LQ+ RPVRR+HG+LLEEGASGFL  KI     ++G  +  + +WN+ N++  S + +
Sbjct: 243  DEYLQSCRPVRRKHGRLLEEGASGFLAGKIP--VGDDGSAQCHEKSWNAFNELTKSKEYA 300

Query: 242  EKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKE 301
            E  ++FGS +WASVYLASTPQ+AAA+GL+FPGVDEVEEI +V+G   D      I    E
Sbjct: 301  E--SSFGSSNWASVYLASTPQEAAALGLQFPGVDEVEEIAEVEGAVSD------IKGVDE 352

Query: 302  LALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRP 361
            + LSE QR+K+RKV EEDDA M ++LQ HLK RR R + K+                   
Sbjct: 353  IELSEVQRRKYRKVPEEDDAKMTKRLQRHLKERRTRHLHKEN------------------ 394

Query: 362  LVDASKSLSNKKTDDGDMPGNNNEVALQNLETGVLESSVKE-RSLSNGISSVSDSALPDS 420
                                    + L +   G  E   K+ ++  NG+S          
Sbjct: 395  ------------------------IGLASSSNGCCELPPKKLKTYENGVSV--------- 421

Query: 421  SELRGIKRSNESEEPNSEKKRSRTIIIGSDEADVVKDECSTKLEDHSVSPENINDAATDN 480
             EL    R ++ E  N   KRS+T+II SD      D+  T  +  S   EN ++    +
Sbjct: 422  -ELAKRTREDDVEFDN---KRSKTVIIESD------DDMQTDSKPDSAPSENADEIIDLD 471

Query: 481  SLHSQS--LSEK-----FYCTACNNV--AIEVHPHPILNVIVCKDCKCLLEKKMHVKDAD 531
               SQS  L +K     F CT C  +    EVH HP+L+VI+C  C+ L+ +K  ++D  
Sbjct: 472  IFPSQSPKLGDKVRPKPFKCTICTEMLNVPEVHRHPVLDVIICGSCRFLVIEKNRLEDP- 530

Query: 532  CSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKR 591
             S  YC WC +S  L SC SCK LFC  C+ +N  E  LS E + + WQCCCC PS L+ 
Sbjct: 531  VSGGYCTWCVKSEQLQSCSSCKLLFCRNCLSKNFGEEGLS-EARVAGWQCCCCLPSQLEH 589

Query: 592  LTSELGRAMGSENLIVSSSESDSENSDAD-NNLKIGG---KRKQKKKIRRILDDAELGEE 647
            L S+  +A+G     V SS  D EN  A+ + L+  G   K K KK+IRRI+DD ELGEE
Sbjct: 590  LISDCDKALGG----VESS--DPENDFAELSVLESNGPFSKHKMKKRIRRIMDDEELGEE 643

Query: 648  TKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVR 707
            TK KIA+EK RQE LKS+Q Q +SK K  N++ +  +  +  S E +GD   G+IVN+ R
Sbjct: 644  TKLKIAMEKARQEHLKSMQEQSASKLK-SNNIGISLEAPSEVS-EYVGD---GHIVNLAR 698

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E+ E  VRIPSSISAKLK HQV GIRFMWEN+IQS++KVKSGDKG GCILAH MGLGKTF
Sbjct: 699  EEDEAPVRIPSSISAKLKPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTF 758

Query: 768  QVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR 827
            QVI FLYT MR + LGLRTALIVTPVNVLHNWK+EF+KW P+E KPLRV+MLEDV R   
Sbjct: 759  QVITFLYTVMRCIQLGLRTALIVTPVNVLHNWKKEFIKWCPAESKPLRVYMLEDVPRANI 818

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
              LL KWR KGGV LIGY++FRNLS G+  +D+ +A EI +ALQ GPDILVCDEAH+IKN
Sbjct: 819  QYLLKKWRIKGGVLLIGYSSFRNLSLGRSARDKTVANEITNALQCGPDILVCDEAHIIKN 878

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
             RADTTQALKQV+ QRRIALTGSPLQNNLMEYYCMVDFVREG+LGSSHEFRNRFQNPIEN
Sbjct: 879  RRADTTQALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGYLGSSHEFRNRFQNPIEN 938

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            GQHTNSTS+DVKIMNQRSHILYEQLKGFVQRMDMNVVK DLP K VFV+TVKLS LQR+L
Sbjct: 939  GQHTNSTSDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPEKKVFVVTVKLSQLQRKL 998

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQLTKDKGYPSREDAE--- 1063
            Y+RFLD++GF++   S +  ++S FFA YQ LA IWNHPG+LQ+ K KG   +ED E   
Sbjct: 999  YRRFLDVNGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQMAKQKGNLRQEDVESFL 1058

Query: 1064 --DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-DWWNDLLHEHTYKELDYSGKM 1120
              +SSSD+N++  +  GEK R+ ND L  K+ D   ++ +WW +LL E+ YKE DYSGKM
Sbjct: 1059 MDESSSDDNIENYLPNGEKLRSRNDQLSKKSSDVVNEESNWWENLLDENAYKEADYSGKM 1118

Query: 1121 VLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT 1180
            VLLLDIL+ CS +GDK+LVFSQS+ TLDL+EFYLSKL   GK+GK WK+GKDWYR+DG T
Sbjct: 1119 VLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWYRIDGST 1178

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
             SSERQ LVERFN+P N RVKCTLISTRAG +GINLHSANRVI++DGSWNPT+DLQAIYR
Sbjct: 1179 PSSERQNLVERFNDPENIRVKCTLISTRAGYIGINLHSANRVILLDGSWNPTHDLQAIYR 1238

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
             WRYGQTKPV+AYRLMAH TMEEKIYKRQVTKEGLAARVVDRQQV RTISKEEMLHLFEF
Sbjct: 1239 VWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRTISKEEMLHLFEF 1298

Query: 1301 GDDE----NPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMESLLGKH 1351
            GD+E    +   +   SK   +      +      LPL      D+LM +LL  H
Sbjct: 1299 GDEELLEQSGSTMNGHSKVGTEKPPTPNSSETTEHLPL------DRLMVNLLHDH 1347


>gi|115482344|ref|NP_001064765.1| Os10g0457700 [Oryza sativa Japonica Group]
 gi|113639374|dbj|BAF26679.1| Os10g0457700, partial [Oryza sativa Japonica Group]
          Length = 1319

 Score = 1427 bits (3695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 767/1324 (57%), Positives = 943/1324 (71%), Gaps = 111/1324 (8%)

Query: 7    EDEKHEEV----EDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEFL 62
            E++ HEE     +D E+DS +  + +S++++ S S   +G + E  LT+EE+E LI EFL
Sbjct: 64   ENDLHEEASTTDDDSENDSYEYLLRESDNEQTSESDAGEGDN-EAPLTDEEVETLITEFL 122

Query: 63   EVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDEL 122
            + ESKAA+AQE+LE ESL K+++EVR EL+++L G++LE+AV  EM  YK++WE+ LD+L
Sbjct: 123  DAESKAAQAQESLEKESLEKIESEVRLELSESLQGNELESAVSTEMKQYKKEWESELDDL 182

Query: 123  ETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGA 182
            ET  A LLEQLD AG+ELPSLY+ IE+QVPN C TEAWK RAHW G QV  E  +SI  A
Sbjct: 183  ETHIAVLLEQLDAAGVELPSLYKSIESQVPNVCETEAWKNRAHWAGYQVPEEANKSIRKA 242

Query: 183  EDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIF-SGDVS 241
            +++LQ+ RPVRR+HG+LLEEGASGFL  KI     ++G  +  + +WN+ N++  S + +
Sbjct: 243  DEYLQSCRPVRRKHGRLLEEGASGFLAGKIP--VGDDGSAQCHEKSWNAFNELTKSKEYA 300

Query: 242  EKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKE 301
            E  ++FGS +WASVYLASTPQ+AAA+GL+FPGVDEVEEI +V+G   D      I    E
Sbjct: 301  E--SSFGSSNWASVYLASTPQEAAALGLQFPGVDEVEEIAEVEGAVSD------IKGVDE 352

Query: 302  LALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRP 361
            + LSE QR+K+RKV EEDDA M ++LQ HLK RR R + K+                   
Sbjct: 353  IELSEVQRRKYRKVPEEDDAKMTKRLQRHLKERRTRHLHKEN------------------ 394

Query: 362  LVDASKSLSNKKTDDGDMPGNNNEVALQNLETGVLESSVKE-RSLSNGISSVSDSALPDS 420
                                    + L +   G  E   K+ ++  NG+S          
Sbjct: 395  ------------------------IGLASSSNGCCELPPKKLKTYENGVSV--------- 421

Query: 421  SELRGIKRSNESEEPNSEKKRSRTIIIGSDEADVVKDECSTKLEDHSVSPENINDAATDN 480
             EL    R ++ E  N   KRS+T+II SD      D+  T  +  S   EN ++    +
Sbjct: 422  -ELAKRTREDDVEFDN---KRSKTVIIESD------DDMQTDSKPDSAPSENADEIIDLD 471

Query: 481  SLHSQS--LSEK-----FYCTACNNV--AIEVHPHPILNVIVCKDCKCLLEKKMHVKDAD 531
               SQS  L +K     F CT C  +    EVH HP+L+VI+C  C+ L+ +K  ++D  
Sbjct: 472  IFPSQSPKLGDKVRPKPFKCTICTEMLNVPEVHRHPVLDVIICGSCRFLVIEKNRLEDP- 530

Query: 532  CSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKR 591
             S  YC WC +S  L SC SCK LFC  C+ +N  E  LS E + + WQCCCC PS L+ 
Sbjct: 531  VSGGYCTWCVKSEQLQSCSSCKLLFCRNCLSKNFGEEGLS-EARVAGWQCCCCLPSQLEH 589

Query: 592  LTSELGRAMGSENLIVSSSESDSENSDAD-NNLKIGG---KRKQKKKIRRILDDAELGEE 647
            L S+  +A+G          SD EN  A+ + L+  G   K K KK+IRRI+DD ELGEE
Sbjct: 590  LISDCDKALGG------VESSDPENDFAELSVLESNGPFSKHKMKKRIRRIMDDEELGEE 643

Query: 648  TKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVR 707
            TK KIA+EK RQE LKS+Q Q +SK K  N++ +  +  +  S E +GD   G+IVN+ R
Sbjct: 644  TKLKIAMEKARQEHLKSMQEQSASKLK-SNNIGISLEAPSEVS-EYVGD---GHIVNLAR 698

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E+ E  VRIPSSISAKLK HQV GIRFMWEN+IQS++KVKSGDKG GCILAH MGLGKTF
Sbjct: 699  EEDEAPVRIPSSISAKLKPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTF 758

Query: 768  QVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR 827
            QVI FLYT MR + LGLRTALIVTPVNVLHNWK+EF+KW P+E KPLRV+MLEDV R   
Sbjct: 759  QVITFLYTVMRCIQLGLRTALIVTPVNVLHNWKKEFIKWCPAESKPLRVYMLEDVPRANI 818

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
              LL KWR KGGV LIGY++FRNLS G+  +D+ +A EI +ALQ GPDILVCDEAH+IKN
Sbjct: 819  QYLLKKWRIKGGVLLIGYSSFRNLSLGRSARDKTVANEITNALQCGPDILVCDEAHIIKN 878

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
             RADTTQALKQV+ QRRIALTGSPLQNNLMEYYCMVDFVREG+LGSSHEFRNRFQNPIEN
Sbjct: 879  RRADTTQALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGYLGSSHEFRNRFQNPIEN 938

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            GQHTNSTS+DVKIMNQRSHILYEQLKGFVQRMDMNVVK DLP K VFV+TVKLS LQR+L
Sbjct: 939  GQHTNSTSDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPEKKVFVVTVKLSQLQRKL 998

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQLTKDKGYPSREDAE--- 1063
            Y+RFLD++GF++   S +  ++S FFA YQ LA IWNHPG+LQ+ K KG   +ED E   
Sbjct: 999  YRRFLDVNGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQMAKQKGNLRQEDVESFL 1058

Query: 1064 --DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-DWWNDLLHEHTYKELDYSGKM 1120
              +SSSD+N++  +  GEK R+ ND L  K+ D   ++ +WW +LL E+ YKE DYSGKM
Sbjct: 1059 MDESSSDDNIENYLPNGEKLRSRNDQLSKKSSDVVNEESNWWENLLDENAYKEADYSGKM 1118

Query: 1121 VLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT 1180
            VLLLDIL+ CS +GDK+LVFSQS+ TLDL+EFYLSKL   GK+GK WK+GKDWYR+DG T
Sbjct: 1119 VLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWYRIDGST 1178

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
             SSERQ LVERFN+P N RVKCTLISTRAG +GINLHSANRVI++DGSWNPT+DLQAIYR
Sbjct: 1179 PSSERQNLVERFNDPENIRVKCTLISTRAGYIGINLHSANRVILLDGSWNPTHDLQAIYR 1238

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
             WRYGQTKPV+AYRLMAH TMEEKIYKRQVTKEGLAARVVDRQQV RTISKEEMLHLFEF
Sbjct: 1239 VWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRTISKEEMLHLFEF 1298

Query: 1301 GDDE 1304
            GD+E
Sbjct: 1299 GDEE 1302


>gi|14140291|gb|AAK54297.1|AC034258_15 putative helicase [Oryza sativa Japonica Group]
          Length = 1492

 Score = 1422 bits (3682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 784/1391 (56%), Positives = 965/1391 (69%), Gaps = 137/1391 (9%)

Query: 7    EDEKHEEV----EDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEFL 62
            E++ HEE     +D E+DS +  + +S++++ S S   +G + E  LT+EE+E LI EFL
Sbjct: 64   ENDLHEEASTTDDDSENDSYEYLLRESDNEQTSESDAGEGDN-EAPLTDEEVETLITEFL 122

Query: 63   EVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDEL 122
            + ESKAA+AQE+LE ESL K+++EVR EL+++L G++LE+AV  EM  YK++WE+ LD+L
Sbjct: 123  DAESKAAQAQESLEKESLEKIESEVRLELSESLQGNELESAVSTEMKQYKKEWESELDDL 182

Query: 123  ETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGA 182
            ET  A LLEQLD AG+ELPSLY+ IE+QVPN C TEAWK RAHW G QV  E  +SI  A
Sbjct: 183  ETHIAVLLEQLDAAGVELPSLYKSIESQVPNVCETEAWKNRAHWAGYQVPEEANKSIRKA 242

Query: 183  EDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIF-SGDVS 241
            +++LQ+ RPVRR+HG+LLEEGASGFL  KI     ++G  +  + +WN+ N++  S + +
Sbjct: 243  DEYLQSCRPVRRKHGRLLEEGASGFLAGKIP--VGDDGSAQCHEKSWNAFNELTKSKEYA 300

Query: 242  EKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKE 301
            E  ++FGS +WASVYLASTPQ+AAA+GL+FPGVDEVEEI +V+G   D      I    E
Sbjct: 301  E--SSFGSSNWASVYLASTPQEAAALGLQFPGVDEVEEIAEVEGAVSD------IKGVDE 352

Query: 302  LALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRP 361
            + LSE QR+K+RKV EEDDA M ++LQ HLK RR R + K+                   
Sbjct: 353  IELSEVQRRKYRKVPEEDDAKMTKRLQRHLKERRTRHLHKEN------------------ 394

Query: 362  LVDASKSLSNKKTDDGDMPGNNNEVALQNLETGVLESSVKE-RSLSNGISSVSDSALPDS 420
                                    + L +   G  E   K+ ++  NG+S          
Sbjct: 395  ------------------------IGLASSSNGCCELPPKKLKTYENGVSV--------- 421

Query: 421  SELRGIKRSNESEEPNSEKKRSRTIIIGSDEADVVKDECSTKLEDHSVSPENINDAATDN 480
             EL    R ++ E  N   KRS+T+II SD      D+  T  +  S   EN ++    +
Sbjct: 422  -ELAKRTREDDVEFDN---KRSKTVIIESD------DDMQTDSKPDSAPSENADEIIDLD 471

Query: 481  SLHSQS--LSEK-----FYCTACNNV--AIEVHPHPILNVIVCKDCKCLLEKKMHVKDAD 531
               SQS  L +K     F CT C  +    EVH HP+L+VI+C  C+ L+ +K  ++D  
Sbjct: 472  IFPSQSPKLGDKVRPKPFKCTICTEMLNVPEVHRHPVLDVIICGSCRFLVIEKNRLEDP- 530

Query: 532  CSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKR 591
             S  YC WC +S  L SC SCK LFC  C+ +N  E  LS E + + WQCCCC PS L+ 
Sbjct: 531  VSGGYCTWCVKSEQLQSCSSCKLLFCRNCLSKNFGEEGLS-EARVAGWQCCCCLPSQLEH 589

Query: 592  LTSELGRAMGSENLIVSSSESDSENSDAD-NNLKIGG---KRKQKKKIRRILDDAELGEE 647
            L S+  +A+G     V SS  D EN  A+ + L+  G   K K KK+IRRI+DD ELGEE
Sbjct: 590  LISDCDKALGG----VESS--DPENDFAELSVLESNGPFSKHKMKKRIRRIMDDEELGEE 643

Query: 648  TKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVR 707
            TK KIA+EK RQE LKS+Q Q +SK K  N++ +  +  +  S E +GD   G+IVN+ R
Sbjct: 644  TKLKIAMEKARQEHLKSMQEQSASKLK-SNNIGISLEAPSEVS-EYVGD---GHIVNLAR 698

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E+ E  VRIPSSISAKLK HQV GIRFMWEN+IQS++KVKSGDKG GCILAH MGLGKTF
Sbjct: 699  EEDEAPVRIPSSISAKLKPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTF 758

Query: 768  QVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR 827
            QVI FLYT MR + LGLRTALIVTPVNVLHNWK+EF+KW P+ELKPLRV+MLEDV R R 
Sbjct: 759  QVITFLYTVMRCIQLGLRTALIVTPVNVLHNWKKEFIKWCPAELKPLRVYMLEDVPRCRA 818

Query: 828  --AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD------------- 872
                LL KWR KGGV LIGY++FRNLS G+  +D+ +A EI +ALQ              
Sbjct: 819  NIQYLLKKWRIKGGVLLIGYSSFRNLSLGRSARDKTVANEITNALQMWVLIQSIYICHNQ 878

Query: 873  -GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             GPDILVCDEAH+IKN RADTTQALKQV+ QRRIALTGSPLQNNLMEYYCMVDFVREG+L
Sbjct: 879  CGPDILVCDEAHIIKNRRADTTQALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGYL 938

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GSSHEFRNRFQNPIENGQHTNSTS+DVKIMNQRSHILYEQLKGFVQRMDMNVVK DLP K
Sbjct: 939  GSSHEFRNRFQNPIENGQHTNSTSDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPEK 998

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQL 1050
             VFV+TVKLS LQR+LY+RFLD++GF++   S +  ++S FFA YQ LA IWNHPG+LQ+
Sbjct: 999  KVFVVTVKLSQLQRKLYRRFLDVNGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQM 1058

Query: 1051 TKDKGYPSREDAE-----DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-DWWND 1104
             K KG   +ED E     +SSSD+N++  +  GEK R+ ND L  K+ D   ++ +WW +
Sbjct: 1059 AKQKGNLRQEDVESFLMDESSSDDNIENYLPNGEKLRSRNDQLSKKSSDVVNEESNWWEN 1118

Query: 1105 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQG 1164
            LL E+ YKE DYSGKMVLLLDIL+ CS +GDK+LVFSQS+ TLDL+EFYLSKL   GK+G
Sbjct: 1119 LLDENAYKEADYSGKMVLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEG 1178

Query: 1165 KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
            K WK+GKDWYR+DG T SSERQ LVERFN+P N RVKCTLISTRAGSLGINLHSANRVI+
Sbjct: 1179 KYWKQGKDWYRIDGSTPSSERQNLVERFNDPENIRVKCTLISTRAGSLGINLHSANRVIL 1238

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
            +DGSWNPT+DLQAIYR WRYGQTKPV+AYRLMAH TMEEKIYKRQVTKEGLAARVVDRQQ
Sbjct: 1239 LDGSWNPTHDLQAIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQ 1298

Query: 1285 VHRTISKEEMLHLFEFGDDE----NPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCS 1340
            V RTISKEEMLHLFEFGD+E    +   +   SK   +      +      LPL      
Sbjct: 1299 VSRTISKEEMLHLFEFGDEELLEQSGSTMNGHSKVGTEKPPTPNSSETTEHLPL------ 1352

Query: 1341 DKLMESLLGKH 1351
            D+LM +LL  H
Sbjct: 1353 DRLMVNLLHDH 1363


>gi|357140572|ref|XP_003571839.1| PREDICTED: transcriptional regulator ATRX-like [Brachypodium
            distachyon]
          Length = 1502

 Score = 1380 bits (3572), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 756/1329 (56%), Positives = 929/1329 (69%), Gaps = 110/1329 (8%)

Query: 59   AEFLEVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAA 118
            AEFL+VESKAA+AQE+LE ESL K++ EVR EL++ L GD LE AV  EM  +K +W   
Sbjct: 117  AEFLDVESKAAKAQESLEKESLEKIEAEVRLELSERLQGDVLELAVSTEMEQFKNEWSTE 176

Query: 119  LDELETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRES 178
            LD+LE  SA LLEQLD AGIELPSLY+ IE+QVPN C TEAWK R HWVGSQV  E  +S
Sbjct: 177  LDDLEIHSAVLLEQLDAAGIELPSLYKSIESQVPNVCETEAWKNRTHWVGSQVPEEANQS 236

Query: 179  IAGAEDFLQTERPVRRRHGKLLEEGASGFLQKK--IANDGSENGGKEVSDINWNSVNKIF 236
            I  A+++LQ+ RPVRR+HGKLLEEGA GFL  K  I +DGS     +  + +W+S N++ 
Sbjct: 237  IRKADEYLQSCRPVRRKHGKLLEEGAGGFLAGKVPIGDDGS----VQCHEKSWSSFNELI 292

Query: 237  SGDVSEKCA--AFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVAD 294
                S++CA  +FGS +WASVYLASTPQ+AAA+GL+FPGVDEVEEI +V+G+       D
Sbjct: 293  K---SKECAESSFGSDNWASVYLASTPQEAAALGLQFPGVDEVEEIAEVEGD------VD 343

Query: 295  AIANEKELALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIED 354
             I    E+ LSEEQR+K++KV+EEDDA   R+L+  +K+R                    
Sbjct: 344  VIKGFDEIELSEEQRRKYKKVREEDDAKTIRRLRRQMKKR-------------------- 383

Query: 355  SAVETRPLVDASKSLSNKKTDDGDMPG-NNNEVALQNLETGVLESSVKERSLSNGISSVS 413
                TR     +  L++      ++P  ++N V   +      E   K +S  N +S   
Sbjct: 384  ----TRSCCKENFGLASSSNGFSELPPLSDNGVLGSSSGLLSSE---KHKSDKNEVSG-- 434

Query: 414  DSALPDSSELRGIKRSNESEEPNSEKKRSRTIIIGSDEADVV--KDECSTKLEDHSVSP- 470
                        +KR+ E ++   + KR +T+I+ SD+  ++  K     ++ D S +  
Sbjct: 435  ----------EPLKRARE-DDFELDHKRPKTVIVESDDDMLINSKPALGNQVSDSSSAEV 483

Query: 471  ENINDAATDNSLHSQS-------LSEKFYCTACNNV--AIEVHPHPILNVIVCKDCKCLL 521
            + + D    + L S+S       L + F CT C  +  A +VH HP+L+V +C  C+ L+
Sbjct: 484  KKVVDIIDLDLLPSESPNFGDKALPKVFKCTVCTEMLNARDVHRHPVLDVTICGSCRFLV 543

Query: 522  EKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQC 581
             +K  + +   S  YC WC +   L SC SC+ LFCT C+ +N  E CLS + + + WQC
Sbjct: 544  IEKNRL-EGPVSGGYCTWCVQCEQLQSCSSCRMLFCTNCLSKNFGEECLS-KAKVAGWQC 601

Query: 582  CCCSPSLLKRLTSELGRAMGSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDD 641
            CCC P  L+ L SE  +A+      V SS+ +S+N+  + +     K K+KK+IRRI+DD
Sbjct: 602  CCCQPRQLEHLISECDKALSG----VESSDLESDNTSGNESDGPVSKHKRKKRIRRIIDD 657

Query: 642  AELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGY 701
             ELGEETKRKIA+EK RQE LKS+  Q +SK    N VT  G LS  +    L DA  G+
Sbjct: 658  TELGEETKRKIAMEKARQEHLKSMHEQSASKLSRSNIVTFSGVLSEVS----LQDAGDGH 713

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            IVNV RE+ EE VRIPSS+S+KLK HQV GIRFMWEN+IQS+R VKSGDKG GCILAH M
Sbjct: 714  IVNVAREEDEEPVRIPSSVSSKLKPHQVSGIRFMWENVIQSVRTVKSGDKGFGCILAHNM 773

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            GLGKTFQVI FLY  MR V LG RTALIVTPVNVLHNW++EF KWRP ELK L VFMLED
Sbjct: 774  GLGKTFQVITFLYVVMRCVQLGFRTALIVTPVNVLHNWRKEFTKWRPDELKSLHVFMLED 833

Query: 822  VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 881
            V+R +R +LL KWRAKGGV LIGY++FRNLS G+H +++  A EI +ALQ GPDILVCDE
Sbjct: 834  VARVKRLQLLNKWRAKGGVLLIGYSSFRNLSLGRHAREKYTADEISNALQCGPDILVCDE 893

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
            AHMIKN RAD T ALKQV+ QRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF
Sbjct: 894  AHMIKNRRADITHALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 953

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
            QNPIENGQHTNSTS+DVKIMNQRSHILYEQLKGFVQRMDMNVVK DLPPK VFVITVKLS
Sbjct: 954  QNPIENGQHTNSTSDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPPKKVFVITVKLS 1013

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQLTKD-KGYPSR 1059
             LQR+LY+RFLD+HGF++   S + +++S FFA YQ LAQIWNHPG+LQ+ K+ +G   R
Sbjct: 1014 QLQRKLYRRFLDVHGFSSGGASEKPLQRSGFFAKYQKLAQIWNHPGLLQMAKEQRGIVRR 1073

Query: 1060 EDA------EDSSSDE--NMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
            EDA      ++SSSD+  N++  +   EK ++  D    K+D    + +WW +LL  +TY
Sbjct: 1074 EDAVENFLTDESSSDDNPNIENQLPDREKQKSKTDQQSKKSDFVNEESNWWENLLDANTY 1133

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
             E DYSGKMVLLLDIL+ C  +G+K LVFSQ++ TLDL+EFYLSKL   GK+ K WK+GK
Sbjct: 1134 MEADYSGKMVLLLDILSTCYELGEKVLVFSQNLTTLDLVEFYLSKLQIKGKERKFWKQGK 1193

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
            DWYRLDG T SSERQ LVERFNEP N RVKCTLISTRAGSLGINLH+ANRV+++DGSWNP
Sbjct: 1194 DWYRLDGSTPSSERQNLVERFNEPANTRVKCTLISTRAGSLGINLHAANRVVLLDGSWNP 1253

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            T+DLQAIYR WRYGQTKPV+AYRLMA+GTMEEKIYKRQVTKEGLAARVVDRQQV RTIS+
Sbjct: 1254 THDLQAIYRVWRYGQTKPVYAYRLMAYGTMEEKIYKRQVTKEGLAARVVDRQQVSRTISR 1313

Query: 1292 EEMLHLFEFGDDENPDPL---------TAVSKENGQGSSQNTNCALKHKLPLSHEGCSDK 1342
            EEMLHLFEFGD+E+ D           TAV  E    SS  T      +LP+      DK
Sbjct: 1314 EEMLHLFEFGDEESLDQCCNGSTIIDHTAVGTEKLSTSSSKTT-----ELPV------DK 1362

Query: 1343 LMESLLGKH 1351
            LM +LL  H
Sbjct: 1363 LMLNLLSDH 1371


>gi|297843648|ref|XP_002889705.1| ATRX/CHR20 [Arabidopsis lyrata subsp. lyrata]
 gi|297335547|gb|EFH65964.1| ATRX/CHR20 [Arabidopsis lyrata subsp. lyrata]
          Length = 1483

 Score = 1270 bits (3286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 643/904 (71%), Positives = 741/904 (81%), Gaps = 26/904 (2%)

Query: 465  DHSVSPENIN-DAATDNSLHSQSLSEKFYCTACNNVAIEVHPHPILNVIVCKDCKCLLEK 523
            D  VS  NIN D   D+S   Q+ +  F CTACNNVA+EVH HP+L VIVC DCK  +E 
Sbjct: 466  DKMVSSPNINVDTMRDDS---QNPANSFMCTACNNVAVEVHSHPLLEVIVCMDCKRSIED 522

Query: 524  KMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCC 583
            ++   D D  E +C WCG  +DL+ C++C+ LFC +C+KRNI E  L+ E Q+S W CCC
Sbjct: 523  RVSKVD-DSLERHCEWCGHIADLIDCRTCEKLFCASCIKRNIGEEYLA-EAQSSGWDCCC 580

Query: 584  CSPSLLKRLTSELGRAMGSENLIVSSSESDSE--------NSDADNNLKIGGKRKQKKKI 635
            CSP  L+RLT EL +AM  +  I SSS+S S+        ++DAD N+ I  K+K KKKI
Sbjct: 581  CSPIPLQRLTLELEKAMRDKKSIESSSDSSSDSSSDNNSVDTDADVNVTISSKKKSKKKI 640

Query: 636  RRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLG 695
            RRI+DDAELG++T+ KIAIEK RQERL+SLQ  FS++ K ++S+     +  GA +EVLG
Sbjct: 641  RRIIDDAELGKDTRTKIAIEKARQERLRSLQ--FSARYKTISSMGDVKSIPEGAEVEVLG 698

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA +GYIVNVVRE GEEAVR+P SISAKLK HQV GIRFMWENIIQSI +VKSGDKGLGC
Sbjct: 699  DAHSGYIVNVVREIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGC 758

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLR 815
            ILAHTMGLGKTFQVIAFLYTAMR V+LGL+TALIVTPVNVLHNW+ EF+KW PSE+KPLR
Sbjct: 759  ILAHTMGLGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFVKWGPSEVKPLR 818

Query: 816  VFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPD 875
            +FMLEDVSR++R +LL KWR KGGVFL+GY  FRNLS GK VKD N AREIC+AL+DGPD
Sbjct: 819  IFMLEDVSREKRLDLLKKWRNKGGVFLMGYAKFRNLSLGKGVKDLNAAREICNALRDGPD 878

Query: 876  ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
            ILVCDEAH+IKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 
Sbjct: 879  ILVCDEAHIIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSP 938

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFV 995
            EFRNRFQNPIENGQH NST+EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFV
Sbjct: 939  EFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFV 998

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            I+VKLSPLQR+LYKRFL L+GF++ R ++E++RK+FFA YQ LAQI NHPGI QL  +  
Sbjct: 999  ISVKLSPLQRKLYKRFLKLYGFSDGR-TDERMRKNFFAAYQVLAQILNHPGIPQLRSEDS 1057

Query: 1056 YPSREDA-----EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHT 1110
               R  +     +D SSDEN+DYN+V GEK R MNDF Q K  DG+ QKDWW DLL ++ 
Sbjct: 1058 KNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDF-QDKV-DGYLQKDWWVDLLEKNN 1115

Query: 1111 YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
            YK  D+SGKM+LLLDIL+M +++GDK+LVFSQSIPTLDLIE YLS++PR GKQGK WKKG
Sbjct: 1116 YKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKG 1175

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
            KDWYR+DG+TESSERQKLV+RFNEP NKRVKCTLISTRAGSLGINL++ANRVIIVDGSWN
Sbjct: 1176 KDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWN 1235

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTIS 1290
            PTYDLQAI+RAWRYGQ KPVFAYRLMA GT+EEKIYKRQVTKEGLAARVVDRQQVHRTIS
Sbjct: 1236 PTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTIS 1295

Query: 1291 KEEMLHLFEF-GDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMESLLG 1349
            KEEMLHLFEF  DDE  D +T +SK+N    S   + + K K  LS  GC DKLM++LL 
Sbjct: 1296 KEEMLHLFEFDDDDEKSDAVTEISKQNEAAQSNLVDNSQKQKATLSRVGC-DKLMQNLLQ 1354

Query: 1350 KHHP 1353
            +H P
Sbjct: 1355 RHGP 1358



 Score =  366 bits (939), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 209/327 (63%), Positives = 260/327 (79%), Gaps = 2/327 (0%)

Query: 2   EDKHSEDEKHEEVEDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEF 61
           ED +  + K EE++D  S S +S   +S+ DE  + G+DD L  E+ L+EEEIEELI++ 
Sbjct: 70  EDNNQAELKDEEMQDTSSRS-ESSDFNSDEDEQFLPGRDDELDFEKPLSEEEIEELISDL 128

Query: 62  LEVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDE 121
           L VESKAAEAQEALE ESL K+++EVREELAQAL GD+L+ AV  EM  +K++WEA LDE
Sbjct: 129 LGVESKAAEAQEALEKESLSKVESEVREELAQALRGDELDEAVAAEMMTFKDEWEANLDE 188

Query: 122 LETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAG 181
           LETESAHLLEQLDGAGIELP LY +IE+Q PNGC TEAWK+RAHWVG+QVT E  ES+A 
Sbjct: 189 LETESAHLLEQLDGAGIELPKLYEMIESQAPNGCYTEAWKQRAHWVGTQVTKETGESLAN 248

Query: 182 AEDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVS 241
           AE FLQT RPVR+RHGKLLEEGASGFL+KK A+   +      S++ W+S+NK+FS +  
Sbjct: 249 AERFLQTHRPVRKRHGKLLEEGASGFLEKKFADGDIKESLAGTSELEWSSLNKVFS-EKR 307

Query: 242 EKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKE 301
           ++  +FGSKHWASVYLASTP QAAAMGL+FPGV+EVEEIE++D +  DPF+ADAI NE+E
Sbjct: 308 DESISFGSKHWASVYLASTPHQAAAMGLEFPGVNEVEEIEEIDASLADPFLADAIDNERE 367

Query: 302 LALSEEQRKKFRKVKEEDDANMDRKLQ 328
           LAL+EEQ+  + +VKEEDD N DR+LQ
Sbjct: 368 LALTEEQKTNYIRVKEEDDINCDRELQ 394


>gi|222612948|gb|EEE51080.1| hypothetical protein OsJ_31779 [Oryza sativa Japonica Group]
          Length = 1417

 Score = 1238 bits (3204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 717/1391 (51%), Positives = 894/1391 (64%), Gaps = 212/1391 (15%)

Query: 7    EDEKHEEV----EDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEFL 62
            E++ HEE     +D E+DS +  + +S++++ S S   +G + E  LT+EE+E LI EFL
Sbjct: 64   ENDLHEEASTTDDDSENDSYEYLLRESDNEQTSESDAGEGDN-EAPLTDEEVETLITEFL 122

Query: 63   EVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDEL 122
            + ESKAA+AQE+LE ESL K+++EVR EL+++L G++LE+AV  EM  YK++WE+ LD+L
Sbjct: 123  DAESKAAQAQESLEKESLEKIESEVRLELSESLQGNELESAVSTEMKQYKKEWESELDDL 182

Query: 123  ETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGA 182
            ET  A LLEQLD AG+ELPSLY+ IE+QVPN C TEAWK RAHW G QV  E  +SI  A
Sbjct: 183  ETHIAVLLEQLDAAGVELPSLYKSIESQVPNVCETEAWKNRAHWAGYQVPEEANKSIRKA 242

Query: 183  EDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIF-SGDVS 241
            +++LQ+ RPVRR+HG+LLEEGASGFL  KI     ++G  +  + +WN+ N++  S + +
Sbjct: 243  DEYLQSCRPVRRKHGRLLEEGASGFLAGKIP--VGDDGSAQCHEKSWNAFNELTKSKEYA 300

Query: 242  EKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKE 301
            E  ++FGS +WASVYLASTPQ+AAA+GL+FPGVDEVEEI +V+G   D      I    E
Sbjct: 301  E--SSFGSSNWASVYLASTPQEAAALGLQFPGVDEVEEIAEVEGAVSD------IKGVDE 352

Query: 302  LALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRP 361
            + LSE QR+K+RKV EEDDA M ++LQ HLK RR R + K+                   
Sbjct: 353  IELSEVQRRKYRKVPEEDDAKMTKRLQRHLKERRTRHLHKEN------------------ 394

Query: 362  LVDASKSLSNKKTDDGDMPGNNNEVALQNLETGVLESSVKE-RSLSNGISSVSDSALPDS 420
                                    + L +   G  E   K+ ++  NG+S          
Sbjct: 395  ------------------------IGLASSSNGCCELPPKKLKTYENGVSV--------- 421

Query: 421  SELRGIKRSNESEEPNSEKKRSRTIIIGSDEADVVKDECSTKLEDHSVSPENINDAATDN 480
             EL    R ++ E  N   KRS+T+II SD      D+  T  +  S   EN ++    +
Sbjct: 422  -ELAKRTREDDVEFDN---KRSKTVIIESD------DDMQTDSKPDSAPSENADEIIDLD 471

Query: 481  SLHSQS--LSEK-----FYCTACNNV--AIEVHPHPILNVIVCKDCKCLLEKKMHVKDAD 531
               SQS  L +K     F CT C  +    EVH HP+L+VI+C  C+ L+ +K  ++D  
Sbjct: 472  IFPSQSPKLGDKVRPKPFKCTICTEMLNVPEVHRHPVLDVIICGSCRFLVIEKNRLEDP- 530

Query: 532  CSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKR 591
             S  YC WC +S  L SC SCK LFC  C+ +N  E  LS E + + WQCCCC PS L+ 
Sbjct: 531  VSGGYCTWCVKSEQLQSCSSCKLLFCRNCLSKNFGEEGLS-EARVAGWQCCCCLPSQLEH 589

Query: 592  LTSELGRAMGSENLIVSSSESDSENSDAD-NNLKIGG---KRKQKKKIRRILDDAELGEE 647
            L S+  +A+G     V SS  D EN  A+ + L+  G   K K KK+IRRI+DD ELGEE
Sbjct: 590  LISDCDKALGG----VESS--DPENDFAELSVLESNGPFSKHKMKKRIRRIMDDEELGEE 643

Query: 648  TKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVR 707
            TK KIA+EK RQE LKS+Q Q +SK K  N++ +  +  +  S E +GD   G+IVN+ R
Sbjct: 644  TKLKIAMEKARQEHLKSMQEQSASKLK-SNNIGISLEAPSEVS-EYVGD---GHIVNLAR 698

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E+ E  VRIPSSISAKLK HQV GIRFMWEN+IQS++KVKSGDKG GCILAH MGLGKTF
Sbjct: 699  EEDEAPVRIPSSISAKLKPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTF 758

Query: 768  QVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR 827
            QVI FLYT MR + LGLRTALIVTPVNVLHNWK+EF+KW P+ELKPLRV+MLEDV R R 
Sbjct: 759  QVITFLYTVMRCIQLGLRTALIVTPVNVLHNWKKEFIKWCPAELKPLRVYMLEDVPRCRA 818

Query: 828  --AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD------------- 872
                LL KWR KGGV LIGY++FRNLS G+  +D+ +A EI +ALQ              
Sbjct: 819  NIQYLLKKWRIKGGVLLIGYSSFRNLSLGRSARDKTVANEITNALQMWVLIQSIYICHNQ 878

Query: 873  -GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             GPDILVCDEAH+IKN RADTTQALKQ                       MVDFVREG+L
Sbjct: 879  CGPDILVCDEAHIIKNRRADTTQALKQ-----------------------MVDFVREGYL 915

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GSSHEFRNRFQNPIENGQHTNSTS+DVKIMNQRSHILYEQLKGFVQRMDMNVVK DLP K
Sbjct: 916  GSSHEFRNRFQNPIENGQHTNSTSDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPEK 975

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQL 1050
             VFV+TVKLS LQR+LY+RFLD++GF++   S +  ++S FFA YQ LA IWNHPG+LQ+
Sbjct: 976  KVFVVTVKLSQLQRKLYRRFLDVNGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQM 1035

Query: 1051 TKDKGYPSREDAE-----DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-DWWND 1104
             K KG   +ED E     +SSSD+N++  +  GEK R+ ND L  K+ D   ++ +WW +
Sbjct: 1036 AKQKGNLRQEDVESFLMDESSSDDNIENYLPNGEKLRSRNDQLSKKSSDVVNEESNWWEN 1095

Query: 1105 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQG 1164
            LL E+ YKE DYSGKMVLLLDIL+ CS +GDK+LVFSQS+ TLDL+EFYLSKL   GK+G
Sbjct: 1096 LLDENAYKEADYSGKMVLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEG 1155

Query: 1165 KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
            K WK+GKDWYR+DG T SSERQ LVER+                                
Sbjct: 1156 KYWKQGKDWYRIDGSTPSSERQNLVERY-------------------------------- 1183

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
                                GQTKPV+AYRLMAH TMEEKIYKRQVTKEGLAARVVDRQQ
Sbjct: 1184 --------------------GQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQ 1223

Query: 1285 VHRTISKEEMLHLFEFGDDE----NPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCS 1340
            V RTISKEEMLHLFEFGD+E    +   +   SK   +      +      LPL      
Sbjct: 1224 VSRTISKEEMLHLFEFGDEELLEQSGSTMNGHSKVGTEKPPTPNSSETTEHLPL------ 1277

Query: 1341 DKLMESLLGKH 1351
            D+LM +LL  H
Sbjct: 1278 DRLMVNLLHDH 1288


>gi|218184670|gb|EEC67097.1| hypothetical protein OsI_33891 [Oryza sativa Indica Group]
          Length = 1143

 Score = 1088 bits (2813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 663/1374 (48%), Positives = 828/1374 (60%), Gaps = 271/1374 (19%)

Query: 11   HEEV----EDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEFLEVES 66
            HEE     +D E+DS +  + +S++++ S S   +G + E  LT+EE+E LI EFL+ ES
Sbjct: 6    HEEASTTDDDSENDSYEYLLRESDNEQTSESDAGEGDN-EAPLTDEEVETLITEFLDAES 64

Query: 67   KAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDELETES 126
            KAA+AQE+LE ESL K+++EVR EL+++L G++LE+AV  EM  YK++WE+ LD+LET  
Sbjct: 65   KAAQAQESLEKESLEKIESEVRLELSESLQGNELESAVSTEMKQYKKEWESELDDLETHI 124

Query: 127  AHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGAEDFL 186
            A LLEQLD AG+ELPSLY+ IE+QVPN C TEAWK RAHW G QV  E  +SI  A+++L
Sbjct: 125  AVLLEQLDAAGVELPSLYKSIESQVPNVCETEAWKNRAHWAGYQVPEEANKSIRKADEYL 184

Query: 187  QTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIF-SGDVSEKCA 245
            Q+ RPVRR+HG+LLEEGASGFL  KI     ++G  +  + +WN+ N++  S + +E  +
Sbjct: 185  QSCRPVRRKHGRLLEEGASGFLAGKIP--VGDDGSAQCHEKSWNAFNELTKSKEYAE--S 240

Query: 246  AFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKELALS 305
            +FGS +WASVYLASTPQ+AAA+GL+FPGVDEVEEI +V+G   D      I    E+ LS
Sbjct: 241  SFGSSNWASVYLASTPQEAAALGLQFPGVDEVEEIAEVEGAVSD------IKGVDEIELS 294

Query: 306  EEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRPLVDA 365
            E Q                        RR++RK+ +           ED A  T+ L   
Sbjct: 295  EVQ------------------------RRKYRKVPE-----------EDDAKMTKRL--- 316

Query: 366  SKSLSNKKTDDGDMPGNNNEVALQNLETGVLESSVKE-RSLSNGISSVSDSALPDSSELR 424
             + L  ++T       +   + L +   G  E   K+ ++  NG+S           EL 
Sbjct: 317  QRHLKERRTRHL----HKENIGLASSSNGCCELPPKKLKTYENGVSV----------ELA 362

Query: 425  GIKRSNESEEPNSEKKRSRTIIIGSDEADVVKDECSTKLEDHSVSPENINDAATDNSLHS 484
               R ++ E  N   KRS+T+II SD      D+  T  +  S   EN ++    +   S
Sbjct: 363  KRTREDDVEFDN---KRSKTVIIESD------DDMQTDSKPDSAPSENADEIIDLDIFPS 413

Query: 485  QSLSEKFYCTACNNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSS 544
            QS            +  +V P P     +C +   + E   H                  
Sbjct: 414  QS----------PKLGDKVRPKP-FKCTICTEMLNVPEVHRHP---------------VL 447

Query: 545  DLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSELGRAMGSEN 604
            D++ C SC+ L         I +  L D V  S   C C                     
Sbjct: 448  DVIICGSCRFLV--------IEKNRLEDPV--SGGYCTC--------------------- 476

Query: 605  LIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKS 664
                                   K K KK+IRRI+DD ELGEETK KIA+EK RQE LKS
Sbjct: 477  -----------------------KHKMKKRIRRIMDDEELGEETKLKIAMEKARQEHLKS 513

Query: 665  LQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL 724
            +Q Q +SK K  N++ +  +  +  S E +GD   G+IVN+ RE+ E  VRIPSSISAKL
Sbjct: 514  MQEQSASKLK-SNNIGISLEAPSEVS-EYVGD---GHIVNLAREEDEAPVRIPSSISAKL 568

Query: 725  KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGL 784
            K HQV GIRFMWEN+IQS++KVKSGDKG GCILAH MGLGKTFQVI FLYT MR + LGL
Sbjct: 569  KPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTFQVITFLYTVMRCIQLGL 628

Query: 785  RTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR--AELLAKWRAKGGVFL 842
            RTALIVTPVNVLHNWK+EF+KW P+ELKPLRV+MLEDV R R     LL KWR KGGV L
Sbjct: 629  RTALIVTPVNVLHNWKKEFIKWCPAELKPLRVYMLEDVPRCRANIQYLLKKWRIKGGVLL 688

Query: 843  IGYTAFRNLSFGKHVKDRNMAREICHALQD--------------GPDILVCDEAHMIKNT 888
            IGY++FRNLS G+  +D+ +A EI +ALQ               GPDILVCDEAH+IKN 
Sbjct: 689  IGYSSFRNLSLGRSARDKTVANEITNALQMWVLIQSIYICHNQCGPDILVCDEAHIIKNR 748

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
            RADTTQALKQ                       MVDFVREG+LGSSHEFRNRFQNPIENG
Sbjct: 749  RADTTQALKQ-----------------------MVDFVREGYLGSSHEFRNRFQNPIENG 785

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            QHTNSTS+DVKIMNQRSHILYEQLKGFVQRMDMNVVK DLP K VFV+TVKLS LQR+LY
Sbjct: 786  QHTNSTSDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPEKKVFVVTVKLSQLQRKLY 845

Query: 1009 KRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQLTKDKGYPSREDAE---- 1063
            +RFLD++GF++   S +  ++S FFA YQ LA IWNHPG+LQ+ K KG   +ED E    
Sbjct: 846  RRFLDVNGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQMAKQKGNLRQEDVESFLM 905

Query: 1064 -DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-DWWNDLLHEHTYKELDYSGKMV 1121
             +SSSD+N++  +  GEK R+ ND L  K+ D   ++ +WW +LL E+ YKE DYSGKMV
Sbjct: 906  DESSSDDNIENYLPNGEKLRSRNDQLSKKSSDVVNEESNWWENLLDENAYKEADYSGKMV 965

Query: 1122 LLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            LLLDIL+ CS +GDK+LVFSQS+ TLDL+EFYLSKL   GK+GK WK+GKDWYR+DG T 
Sbjct: 966  LLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWYRIDGSTP 1025

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
            SSERQ LVER+                                                 
Sbjct: 1026 SSERQNLVERY------------------------------------------------- 1036

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFG 1301
               GQTKPV+AYRLMAH TMEEKIYKRQVTKEGLAARVVDRQQV RTISKEEMLHLFEFG
Sbjct: 1037 ---GQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRTISKEEMLHLFEFG 1093

Query: 1302 DDE----NPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMESLLGKH 1351
            D+E    +   +   SK   +      +      LPL      D+LM +LL  H
Sbjct: 1094 DEELLEQSGSTMNGHSKVGTEKPPTPNSSETTEHLPL------DRLMVNLLHDH 1141


>gi|357441417|ref|XP_003590986.1| Transcriptional regulator ATRX [Medicago truncatula]
 gi|355480034|gb|AES61237.1| Transcriptional regulator ATRX [Medicago truncatula]
          Length = 1653

 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/589 (72%), Positives = 468/589 (79%), Gaps = 58/589 (9%)

Query: 825  DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ------------- 871
            DRRA+LLAKWRAKGGV LIGY AFRNLSFGKHVKDR MARE+CHALQ             
Sbjct: 951  DRRAQLLAKWRAKGGVLLIGYAAFRNLSFGKHVKDREMARELCHALQSQWPRIMMVLSVF 1010

Query: 872  ----------------------------------DGPDILVCDEAHMIKNTRADTTQALK 897
                                              DGPDILVCDEAH+IKNT+AD T ALK
Sbjct: 1011 SNDTGTTLSKGGLDHNRQVGPVWSRCGEEGCWRWDGPDILVCDEAHIIKNTKADVTHALK 1070

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
            QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST  D
Sbjct: 1071 QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTQTD 1130

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
            VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR+LYKRF+D+HGF
Sbjct: 1131 VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRFIDVHGF 1190

Query: 1018 TNDRVSNEKIRK-SFFAGYQALAQIWNHPGILQLTK-DKGYPSREDAEDS-----SSDEN 1070
            +N + + E +RK SFFAGYQALA+IWNHPGILQ+ K DK     ED  ++      S ++
Sbjct: 1191 SNVKENQENLRKRSFFAGYQALARIWNHPGILQMAKEDKECVRPEDVVENLLVDDISSDD 1250

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 1130
             D NV+ GEK +  ND    K+ +GFF K WW D+L    +KE+D SGKMVLL+DILTM 
Sbjct: 1251 SDSNVLAGEKLKYTNDLPPRKDGNGFFIKGWWKDILQGKIFKEIDQSGKMVLLIDILTMS 1310

Query: 1131 SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVE 1190
            S++GDK LVFSQSIPTLDLIE YLSKLPR GK+GKLWKKG+DWYRLDGRTESSERQKLVE
Sbjct: 1311 SDVGDKVLVFSQSIPTLDLIELYLSKLPRSGKRGKLWKKGRDWYRLDGRTESSERQKLVE 1370

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
            RFNEPLNKRVKCTLISTRAGSLGINLH+ANRV+IVDGSWNPTYDLQAIYRAWRYGQ KPV
Sbjct: 1371 RFNEPLNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPV 1430

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLT 1310
            FAYRL+AHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFG+DENP+ L 
Sbjct: 1431 FAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGEDENPETLA 1490

Query: 1311 AVSKENGQGSSQNTNCALKHKLPLSH-EGCSDKLMESLLGKHHPRCAVN 1358
             +S+   Q +      +LKH +P S+    SDKLMESLLGKHHPR   N
Sbjct: 1491 ELSE---QSNPILAGDSLKHTVPHSNGSSYSDKLMESLLGKHHPRWIAN 1536



 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/447 (57%), Positives = 325/447 (72%), Gaps = 10/447 (2%)

Query: 12  EEVEDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEFLEVESKAAEA 71
           +EV +IES SG S   DS+ +  S S  DD LHLEE L+E EIE+LI+E LEVESKAAEA
Sbjct: 138 DEVVNIESASGGSANDDSDDEGSSPSDIDDKLHLEEPLSEAEIEDLISELLEVESKAAEA 197

Query: 72  QEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDELETESAHLLE 131
           QE LE ESL K+++EVR+EL Q L GDDLE AV DEM  +KE+WEAALD+LETES+HLLE
Sbjct: 198 QETLEEESLAKVESEVRQELEQTLQGDDLETAVADEMAAFKEEWEAALDDLETESSHLLE 257

Query: 132 QLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGAEDFLQTERP 191
           QLDGAGIELPSLY+LIE + P+ CCTEAWK+R HWVGSQ T+E+  S++ AE +LQ  RP
Sbjct: 258 QLDGAGIELPSLYKLIEREAPDRCCTEAWKKRNHWVGSQATTEIASSVSDAEKYLQINRP 317

Query: 192 VRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVSEKCAAFGSKH 251
           VRRRHGKLLEEGASGFLQKKI+ +  E G KE ++ +W+  NKI S D S   A+FGSK 
Sbjct: 318 VRRRHGKLLEEGASGFLQKKISPETLEPGKKE-TEGDWDVFNKIIS-DESGIDASFGSKT 375

Query: 252 WASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKELALSEEQRKK 311
           WASVYLASTPQQAA +GL+FPGV+EVEEI+D+DGNS DPFVA AIANEKEL LSEEQR++
Sbjct: 376 WASVYLASTPQQAALIGLEFPGVNEVEEIDDIDGNSTDPFVAAAIANEKELDLSEEQRRQ 435

Query: 312 FRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRPLVDASKSLSN 371
           F+KVKEEDDA +DRKLQ+ LK RRHRK SKQ+E  +   ++E  A ++  +   +     
Sbjct: 436 FKKVKEEDDAIVDRKLQVRLKHRRHRKKSKQRETSTPILSMESHAQKSSSVDQFNPDTKE 495

Query: 372 KKTDDGDMPGNNNEVALQNLETGVLESSVKERSLSN----GISSVSDS---ALPDSSELR 424
             +D+G++  +NN+ A  N+E   ++       L N    G  ++ D     L D  E R
Sbjct: 496 GTSDEGEILSDNNKAAGLNMEATKIKGFDANFHLDNEKPMGDGNLQDPPKYPLGDDIEQR 555

Query: 425 GIKRSNESEEPNSEKKRSRTIIIGSDE 451
           G KR N+  E +++KK+ R  I+ SD+
Sbjct: 556 GTKRLNDG-ELDADKKKGRADIMNSDD 581



 Score =  283 bits (725), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/273 (57%), Positives = 177/273 (64%), Gaps = 62/273 (22%)

Query: 639 LDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAI 698
           LDD ELGEETK+KIAIEKERQERLKSL+VQFS+ S   +S   +G  S GASIE+LGDA+
Sbjct: 628 LDDTELGEETKKKIAIEKERQERLKSLRVQFSASSFDTSSAGCNGSSSEGASIEILGDAL 687

Query: 699 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            GYIVNVVREKGEEAVRIP SISAKLKAHQ+ GIRFMWENIIQSIRKVKSGDKGLGCILA
Sbjct: 688 AGYIVNVVREKGEEAVRIPPSISAKLKAHQIAGIRFMWENIIQSIRKVKSGDKGLGCILA 747

Query: 759 HTMGLGKTFQ-------------------------------------------------V 769
           HTMGLGKTFQ                                                 +
Sbjct: 748 HTMGLGKTFQDRDSYLGSRWGSKIAKCKSGTRSKKKSVQYQDLNRDFDDIAHIPLVLLDL 807

Query: 770 IAFL---------YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE 820
           +AF          YTAMRSV+LGLRTALIVTPVNVLHNW+ EF+KW PSELK L+VFMLE
Sbjct: 808 LAFFLSTLVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRTEFIKWAPSELKRLKVFMLE 867

Query: 821 DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSF 853
           DVS       L+ W     +  + ++ F   SF
Sbjct: 868 DVSSSLLNSSLSNWL----ITALCFSLFPTCSF 896


>gi|224145836|ref|XP_002325781.1| hypothetical protein POPTRDRAFT_826092 [Populus trichocarpa]
 gi|222862656|gb|EEF00163.1| hypothetical protein POPTRDRAFT_826092 [Populus trichocarpa]
          Length = 1114

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/732 (63%), Positives = 542/732 (74%), Gaps = 78/732 (10%)

Query: 314  KVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRPLVDASKSLSNKK 373
            +VKEEDDA +D+KLQLHLK+RR RK  KQ  + SV   +  +  E  PL D         
Sbjct: 435  EVKEEDDAKIDQKLQLHLKQRRQRKRCKQG-VSSVIQEMGRNMDEPLPLDD--------- 484

Query: 374  TDDGDMPGNNNEVALQNLETGVLESS-VKERSLSNGISSVSDSALPDSSELRGIKRSNES 432
                    + NEV  Q+L+   L    V E S     S   +SALPD++E R  KR NES
Sbjct: 485  --------DYNEVTCQDLKKDKLSVDLVMEHSTGKSNSVFPESALPDATEPRRSKRPNES 536

Query: 433  EEPNSEKKRSRTIIIGSD-EADVVKDEC--STKLEDHSVSPENINDAATDNSLHSQSLSE 489
            E+ +   K+ RT+II SD EA +++D+   + K+ED S   EN  D  TD +  SQ  +E
Sbjct: 537  EDLSINDKKIRTVIIDSDDEAGILEDKSVHNIKVEDQSTLQENTGDPTTDCN-PSQGSNE 595

Query: 490  KFYCTACNNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSC 549
            KF CTAC+ VA+E H HP+L VIVCKDCK L+E+KMH KD DCSECY             
Sbjct: 596  KFLCTACDKVAVEAHSHPLLKVIVCKDCKFLMEEKMHAKDPDCSECY------------- 642

Query: 550  KSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSELGRAMGSENLIVSS 609
                   C  C  RNI                              L +A+GS + +++S
Sbjct: 643  -------CGWC-GRNIEL----------------------------LEKAVGSGDTMITS 666

Query: 610  SESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQF 669
            S+SDSE+SD D  + I  KRK+KKKIRRI+DDAELGEETKRKIAIEKERQERLKSL+VQF
Sbjct: 667  SDSDSESSDTDGGVTIRSKRKKKKKIRRIIDDAELGEETKRKIAIEKERQERLKSLKVQF 726

Query: 670  SSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQV 729
            S KSK++N  +  G+L+ GAS+EVLGDA TGYIVNVVREKGEEAVRIP SIS+KLKAHQV
Sbjct: 727  SDKSKMINPASCSGNLTEGASVEVLGDATTGYIVNVVREKGEEAVRIPPSISSKLKAHQV 786

Query: 730  VGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALI 789
             GIRF+WENIIQSI K +SGDKGLGCILAH MGLGKTFQVIAFLYTAMRSV+LGLRT L+
Sbjct: 787  TGIRFLWENIIQSIGKARSGDKGLGCILAHMMGLGKTFQVIAFLYTAMRSVDLGLRTVLL 846

Query: 790  VTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFR 849
            VTPVNVLHNW++EFMKW PSE+KPLRVFMLEDVSR+RRAELLAKWRAKGGVFLIGY+AFR
Sbjct: 847  VTPVNVLHNWRKEFMKWTPSEVKPLRVFMLEDVSRERRAELLAKWRAKGGVFLIGYSAFR 906

Query: 850  NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTG 909
            NL+ GK+VK+  +AREIC+ALQDGPDILVCDEAH+IKNTRADTTQALK VKCQRRIALTG
Sbjct: 907  NLTLGKNVKEPKLAREICNALQDGPDILVCDEAHIIKNTRADTTQALKLVKCQRRIALTG 966

Query: 910  SPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILY 969
            SPLQNNLMEYYC+    +   +  SH     FQNPIENGQHTNS  +DVKIMNQRSHILY
Sbjct: 967  SPLQNNLMEYYCL----QYILIRCSHAC--SFQNPIENGQHTNSMVDDVKIMNQRSHILY 1020

Query: 970  EQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRK 1029
            EQLKGFVQRMDM+VVKKDLPPKTVFV+ VKLSPLQR+LYKRFLD+HGFTN RVSNEK+RK
Sbjct: 1021 EQLKGFVQRMDMSVVKKDLPPKTVFVVAVKLSPLQRKLYKRFLDVHGFTNGRVSNEKMRK 1080

Query: 1030 SFFAGYQALAQI 1041
            SFFAGYQALAQ+
Sbjct: 1081 SFFAGYQALAQV 1092



 Score =  351 bits (900), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 206/375 (54%), Positives = 253/375 (67%), Gaps = 69/375 (18%)

Query: 10  KHEEVEDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEFLEVESKAA 69
           K+EEV+DI+S S DSFI D E+DEPS SGQDDG  ++  LT++E+EEL+AEFLEVESKAA
Sbjct: 4   KNEEVQDIDSASSDSFIDDDENDEPSTSGQDDGTRIQVPLTDQEVEELVAEFLEVESKAA 63

Query: 70  EAQEALELESLVKLKNEVREELAQALHG----------------------DDLE------ 101
           EAQEALE ESL K++++VREELAQ+L G                      D+LE      
Sbjct: 64  EAQEALEKESLAKVESDVREELAQSLQGDDLEAAVEDEMTTFREEWENVLDELETESYHL 123

Query: 102 ---AAVEDEMTVYKEQWE----AALDELET--------ESAHLLE--------------- 131
              AA    M +    W     A+L E+E         +++H++E               
Sbjct: 124 LDIAATVVYMILAYSIWLVAAWASLTEMEQLSIVVSSKQNSHIMEPLDFGLLRKYYDFVS 183

Query: 132 ----------QLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAG 181
                     QLDG+GIELPSLY+ IE+Q PNGCCTEAWKRRAHWVGSQVT E  +S+A 
Sbjct: 184 MFMVTVTVKEQLDGSGIELPSLYKWIESQAPNGCCTEAWKRRAHWVGSQVTKETIDSVAD 243

Query: 182 AEDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVS 241
           AE +LQ  RP RRRHGKLLEEGASGFLQKK++ DGSE    E  +++W S+ K+FS    
Sbjct: 244 AEKYLQIHRPARRRHGKLLEEGASGFLQKKLSMDGSE-AIVENGEVDWVSMKKLFSTSSG 302

Query: 242 EKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKE 301
           E  A+FGSKHWASVYLA+TPQ+AA MGLKFPGV+EVEEIED+D +S DPFVA+A+ANEKE
Sbjct: 303 EDVASFGSKHWASVYLANTPQEAALMGLKFPGVNEVEEIEDIDEDSIDPFVAEAVANEKE 362

Query: 302 LALSEEQRKKFRKVK 316
           L LSEEQRK +RK+K
Sbjct: 363 LVLSEEQRKSYRKIK 377


>gi|168012254|ref|XP_001758817.1| SNF2 family DNA-dependent ATPase domain-containing protein
            [Physcomitrella patens subsp. patens]
 gi|162689954|gb|EDQ76323.1| SNF2 family DNA-dependent ATPase domain-containing protein
            [Physcomitrella patens subsp. patens]
          Length = 1437

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/848 (50%), Positives = 558/848 (65%), Gaps = 30/848 (3%)

Query: 483  HSQSLSEKFYCTACNNVAI--EVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWC 540
            +S +    F CTAC  +    +V  HP L+V +C+ CK  L      KD D  E  C WC
Sbjct: 402  YSDAEPRNFSCTACGMLLRNRDVMKHPTLDVGICRKCKNFLFSGPFNKDQDGHEDECRWC 461

Query: 541  GRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSE---LG 597
            G+  D++ C+SC  +FC  C+KRN+ E  L   V +S W+C  C+   L  L  +   + 
Sbjct: 462  GQGGDVLCCESCDKVFCCPCIKRNLGEEGLDQIVNSSDWKCFFCNKQPLHNLRQQYQAVK 521

Query: 598  RAMGSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKE 657
             A+ ++ L+      DSE  D   N KI   +K+++ IR + DD EL E+TK  +A+EKE
Sbjct: 522  DALKTQLLL-----QDSE--DGLWNDKITSNKKRRRNIRSVPDDRELDEKTKHLLALEKE 574

Query: 658  RQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAIT-----GYIVNVVREKGEE 712
            RQ+ L+S + +     K     +   +     S E+L   I      G+I+N  R   EE
Sbjct: 575  RQDLLESWRAKAKVNGKGPPVKSNRQNRHMHISDELLDMDIDDIAEEGFILNKARADNEE 634

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
             VRI   ISA L+ HQ+ G+RFMWEN I+S+ KVKSG  GLGCILAH+MGLGKT QVI F
Sbjct: 635  PVRISPHISAVLRPHQLAGMRFMWENCIESVSKVKSGVDGLGCILAHSMGLGKTLQVIGF 694

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR--RAEL 830
            ++T ++ V+LGL+T LIV PVNVLHNW+ EF KW+P    P+ V+MLEDV+RD   RA L
Sbjct: 695  VHTVLKKVDLGLKTVLIVVPVNVLHNWRSEFHKWQPGNEAPVPVYMLEDVARDNVNRARL 754

Query: 831  LAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTR 889
            L KW+  GGV LIGYTAFRNLS GK VKD+ +   +C +LQD GPDILVCDEAHMIKN +
Sbjct: 755  LGKWQRCGGVMLIGYTAFRNLSIGKTVKDKIVRDNLCTSLQDPGPDILVCDEAHMIKNRK 814

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
            AD TQAL+QV+  RRIALTGSPLQNNL+EYYCMVDFVREGFLG + EF+ RFQNPIENGQ
Sbjct: 815  ADITQALRQVRTHRRIALTGSPLQNNLLEYYCMVDFVREGFLGPALEFKRRFQNPIENGQ 874

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
              +STS+DVK+M  R+H+L++QL GFVQR  M+V+K +LP K V+VI+V+LSPLQR LY 
Sbjct: 875  RADSTSKDVKLMKHRAHVLHKQLMGFVQRKTMSVLKDELPSKCVYVISVRLSPLQRALYL 934

Query: 1010 RFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQLTKDKGYPSRED------- 1061
            ++L ++GF N  ++ ++ R+S  F  Y  LA+IWNHP +L L +++    +ED       
Sbjct: 935  KYLQINGFLNSGLNEKQGRRSILFEAYHTLAKIWNHPDLLILAQEEKNLRKEDNLENFIV 994

Query: 1062 --AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
               +D      +   V  G    +    +   N D    K WW DL+     + L+ SGK
Sbjct: 995  DIDDDVPEVPEVPEVVDAGHSVYDGVIVINDDNGDDETAKGWWKDLIDGQQREVLELSGK 1054

Query: 1120 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
            MV+L+ IL++ S   DK+LVFSQS+ TLDLIE +L+ +P        W K +DWYRLDG+
Sbjct: 1055 MVILMKILSLSSVKSDKALVFSQSLHTLDLIEVFLANMPCLNGWKGNWVKNRDWYRLDGQ 1114

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
            T +  RQ+LVERFN+P N  V+C LISTRAGSLGINL +ANRVII DGSWNPT+DLQA++
Sbjct: 1115 TSAKSRQELVERFNDPDNTSVQCVLISTRAGSLGINLPAANRVIIFDGSWNPTHDLQALF 1174

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFE 1299
            RAWR+GQ K V+AYRL+A GTMEEKIY RQV KEGLAARV+D  QV R   ++++   F 
Sbjct: 1175 RAWRFGQKKNVYAYRLLASGTMEEKIYNRQVAKEGLAARVLDEHQVGRYFVEDDLDFFFV 1234

Query: 1300 FGDDENPD 1307
               D+ P+
Sbjct: 1235 LDQDDYPE 1242



 Score =  223 bits (567), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 133/307 (43%), Positives = 188/307 (61%), Gaps = 5/307 (1%)

Query: 44  HLEEHLTEEEIEELIAEFLEVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAA 103
           ++E   T+E+I+ L+ +F + E +A EAQE LE ESL  ++ EV  ELA+   G +LEAA
Sbjct: 35  NVEVTYTDEDIQNLLDDFFQAEHEAIEAQEKLEDESLEAMRKEVSSELAETKSGPELEAA 94

Query: 104 VEDEMTVYKEQWEAALDELETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRR 163
           +E+EM  Y E  +  L ELE + A L E+L+ AG +LP LY+L+E Q+P  C TE W++R
Sbjct: 95  IEEEMETYIEICKDQLAELEDQIALLQEKLEDAGQDLPQLYKLLEKQLPELCTTETWRKR 154

Query: 164 AHWVGSQVTSEMRESIAGAEDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKE 223
            HWVG   T E  E +  AE  L+ +RPVRR HG++ +EGASGFL KK+ +    +   E
Sbjct: 155 THWVGLAPTPEAFEVVQKAELDLKEKRPVRRHHGRIQDEGASGFLVKKVESKTESDVAPE 214

Query: 224 VSDINWNSVNKIFSGDVSEKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDV 283
            +   ++ ++K    D     +  G+  WASVYLASTP+QAA MGL  PG D VEEI D+
Sbjct: 215 DAWSLYDVLDK--EEDNPGPGSLMGTAKWASVYLASTPEQAALMGLALPGADTVEEIGDL 272

Query: 284 DGNSDDPFVADAIANEKELALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRK--ISK 341
           D N    F  +A+ANE + + +  Q+   +KV+E DD    +KLQ     RR RK  I +
Sbjct: 273 DENKSKLF-REALANEGQQSSAGPQKIIVKKVREADDVKKTKKLQRKQPPRRPRKRLIQQ 331

Query: 342 QKEIGSV 348
           QK++  V
Sbjct: 332 QKKVEGV 338


>gi|302793538|ref|XP_002978534.1| hypothetical protein SELMODRAFT_443867 [Selaginella moellendorffii]
 gi|300153883|gb|EFJ20520.1| hypothetical protein SELMODRAFT_443867 [Selaginella moellendorffii]
          Length = 1858

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/945 (47%), Positives = 586/945 (62%), Gaps = 86/945 (9%)

Query: 398  SSVKERSLSNG-ISSVSDSALPDS-SELRGIKRSNESEEPNSEKKRSRTIIIGSDE---- 451
            S+ + R++  G + S   +AL ++ S L+ +KR  E    +S  KR R  ++ S E    
Sbjct: 646  STAQPRTVDQGKVPSKDVTALDETTSPLKPLKRVTEHGS-SSRCKRKRCFMVNSSEDEED 704

Query: 452  ADVVKDECSTKLEDHSVSPENINDA--------ATDNSLHSQSLSEKFYCTACNNV--AI 501
            A   K E S    D     E  +D+        + D        +  F CT C     A 
Sbjct: 705  ATSAKKEQSGLKSDRDEQEERNSDSCDLSQSKLSGDTRRRLTRGNRSFGCTVCGETMSAK 764

Query: 502  EVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCV 561
            +V  HP+L VI+C  CK   +     KD D SE  C WCG    L+ C SC  +FC +C+
Sbjct: 765  DVLSHPVLKVIICTSCKQQYDDGPFRKDEDGSEAECRWCGEGGSLICCDSCDKVFCESCI 824

Query: 562  KRNISEACLSDEVQASCWQCCCCSPSLLKRLTSELGRAMGSENLIVSSSESDSE---NSD 618
             RN   A L + ++   W+C  C PS L  L          + L V+  E+  E   N D
Sbjct: 825  GRNFGPAFL-ESIEDISWKCYLCDPSPLASL---------QQWLKVAEEEALKESLANLD 874

Query: 619  ADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERL----------KSLQVQ 668
               N     ++KQ+K IRR+L D EL E TK+K+A+EKER+ERL          KSL  +
Sbjct: 875  VRRN-----RKKQRKNIRRVLRDDELDEVTKQKLALEKERRERLAEWYAEARKGKSLSGK 929

Query: 669  FSSKSKLMNSVTLDGDLSAGASIEVLGDAIT-GYIVNVV-REKGEEAVRIPSSISAKLKA 726
             ++  K +     D  +  G       D  T G ++N+  R+ GE  VRIP+SIS  LK 
Sbjct: 930  AANSEKAVEGTDGDDHICEG-------DCKTEGCVINIASRQTGEPLVRIPASISKHLKP 982

Query: 727  HQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT 786
            HQ+ G+RFMW+N I+S+ KVKSGD GLGCILAH+MGLGKT QVIAFLYT MR+V+L  +T
Sbjct: 983  HQLCGVRFMWDNCIESVEKVKSGDVGLGCILAHSMGLGKTLQVIAFLYTVMRNVDLNFKT 1042

Query: 787  ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR--RAELLAKWRAKGGVFLIG 844
             L+V PVNVLHNWK+EF KWRP+E+ PL V ML D SRD   RA LL  W+ KGGV LIG
Sbjct: 1043 VLVVVPVNVLHNWKREFEKWRPAEVAPLEVSML-DTSRDNATRASLLKSWKEKGGVMLIG 1101

Query: 845  YTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQR 903
            Y AFRNLS G HVKD+     +C  LQD G DI+VCDE H IKN +AD T AL++VK  R
Sbjct: 1102 YAAFRNLSTGSHVKDKETRDTLCKCLQDPGADIVVCDEGHTIKNDKADITIALQRVKSGR 1161

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            RIA+TGSPLQNNLMEYYCMVDFVR GFLG    FRN+ QNPI NGQH +ST +DVK M +
Sbjct: 1162 RIAMTGSPLQNNLMEYYCMVDFVRPGFLGPQAIFRNKVQNPIANGQHADSTPDDVKKMKR 1221

Query: 964  RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS 1023
              HIL+++L GFVQR DM V+K +LPPK V+VI+V+LSPLQ++LYK+FL L         
Sbjct: 1222 TVHILHKRLSGFVQRRDMTVLKDELPPKCVWVISVRLSPLQKQLYKKFLSL--------- 1272

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR--EDAEDSSSDENMDYNVVIGEK- 1080
             E  R   F  Y  LA+IWNHP +L + K++        D+E   S EN       G+  
Sbjct: 1273 CETGRSKLFDHYHVLAKIWNHPDLLAIAKEQRLNEEFIVDSEKEDSAEN-------GQGC 1325

Query: 1081 PRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVF 1140
            P+  +        D F   +W  ++L E     L+ SGKMVL++ +L++ S+ G+K+LVF
Sbjct: 1326 PKRAS-----PEADSF---EWCEEILKESKRDVLENSGKMVLIMTLLSLNSSRGEKTLVF 1377

Query: 1141 SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRV 1200
            SQS+ TLDLIE +L  +P  G Q  +W KG++W RLDG T +S RQ++ + FN+P N  +
Sbjct: 1378 SQSLHTLDLIENFLDTIPLGGSQ-DVWNKGREWLRLDGNTTASRRQQIADIFNDPNNTAI 1436

Query: 1201 KCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGT 1260
            KC LIST+AGSLG N+  ANRVIIVDGSWNPT+DLQA++RAWRYGQTKPVF YRL+A+GT
Sbjct: 1437 KCLLISTKAGSLGTNMTGANRVIIVDGSWNPTHDLQALFRAWRYGQTKPVFVYRLLAYGT 1496

Query: 1261 MEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            MEEKIY RQ+TKEG+AARV+D  QV R ++ +++  ++   DD++
Sbjct: 1497 MEEKIYNRQLTKEGIAARVLDAHQVGRHLNADDLELMYTLDDDDD 1541



 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/328 (41%), Positives = 197/328 (60%), Gaps = 12/328 (3%)

Query: 9   EKHEEVEDIESDSGDSFI-VDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEFLEVESK 67
           EK ++  +++ + GD  +  DS  DE    G       E   ++EE+  +I   +E+ES+
Sbjct: 122 EKEDKACEVQREEGDGGVEKDSSEDECDGDGYMSESSSEGSKSDEEVTRMIDWLVEIESE 181

Query: 68  AAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDELETESA 127
           +A+AQE LE ES+ K++ EVR EL++ L G +L+ AV  EM  Y   W+  L ELE ESA
Sbjct: 182 SADAQEHLEDESVKKVEEEVRLELSETLSGQELDMAVSCEMADYVSIWKKTLLELEEESA 241

Query: 128 HLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGAEDFLQ 187
            L ++L+ AG+ LP L++ IE Q   GC T+ W+ RAHW G+Q   +  E +  AE  L 
Sbjct: 242 KLQDRLEDAGVSLPDLFKAIEKQAAEGCMTDTWRNRAHWAGTQAPEDFAEVLHSAEKDLD 301

Query: 188 TERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVSEKCAAF 247
             RPV RR GKL+EEGASGFL++K+ +  +  G        W + +  F   +S   + F
Sbjct: 302 ALRPVIRRRGKLVEEGASGFLERKVNDVDTVKGS-----TGWEAFDSAFQPKLS-AVSLF 355

Query: 248 GSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKELALSEE 307
            SK WA+VY ASTP+QAA +GLKFPGVD+V++I D+D +      A A+A E E  L+E 
Sbjct: 356 ESKKWAAVYSASTPEQAARLGLKFPGVDKVDDIADIDQHVG--MEAAALAEESEFGLTEH 413

Query: 308 QRKKFRKVKEEDDANMDRKLQLHLKRRR 335
           Q+K  ++V+EEDD    R++Q  +  RR
Sbjct: 414 QKKTMKRVREEDDV---RQMQKKIGARR 438


>gi|302773596|ref|XP_002970215.1| hypothetical protein SELMODRAFT_441095 [Selaginella moellendorffii]
 gi|300161731|gb|EFJ28345.1| hypothetical protein SELMODRAFT_441095 [Selaginella moellendorffii]
          Length = 1901

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/943 (47%), Positives = 588/943 (62%), Gaps = 82/943 (8%)

Query: 398  SSVKERSLSNG-ISSVSDSALPDS-SELRGIKRSNESEEPNSEKKRSRTIIIGSDE---- 451
            S+ + R++  G + S   +AL ++ S L+ +KR  E    +S  KR R  ++ S E    
Sbjct: 642  STAQPRTVDQGKVPSKDVTALDETTSPLKPLKRVIEHGS-SSRCKRKRCFMVNSSEDEED 700

Query: 452  ADVVKDECSTKLEDHSVSPENINDA--------ATDNSLHSQSLSEKFYCTACNNV--AI 501
            A   K E S    D     E  +D+        + D        S  F CT C  +  A 
Sbjct: 701  ATSAKKEQSGLKSDRDEQEERNSDSCDLSQSKLSGDTRRRLTRGSRSFGCTVCGEIMSAK 760

Query: 502  EVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCV 561
            +V  HP+L VI+C  CK   +     KD D SE  C WCG    L+ C SC  +FC +C+
Sbjct: 761  DVLSHPVLKVIICTSCKQQYDDGPFRKDEDGSEAECRWCGEGGSLICCDSCDKVFCESCI 820

Query: 562  KRNISEACLSDEVQASCWQCCCCSPSLLKRLTSELGRAMGSENLIVSSSESDSENSDADN 621
             RN   A L + ++   W+C  C PS L  L          + L V+  E+  E+     
Sbjct: 821  GRNFGPAFL-ESIEDISWRCYLCDPSPLASL---------QQWLKVAEEEALKESL---A 867

Query: 622  NLKIGGKRKQKKK-IRRILDDAELGEETKRKIAIEKERQERL----------KSLQVQFS 670
            NL +   RK+++K IRR+L D EL E TK+K+A+EKER+ERL          KSL  + +
Sbjct: 868  NLDVRRNRKRQRKNIRRVLRDDELDEVTKQKLALEKERRERLAEWYAEARKGKSLSGKAA 927

Query: 671  SKSKLMNSVTLDGDLSAGASIEVLGDAIT-GYIVNVV-REKGEEAVRIPSSISAKLKAHQ 728
            +  K +     D  +  G       D  T G ++N+  R+ GE  VRIP+SIS  LK HQ
Sbjct: 928  NSEKAVEGTDGDDHICEG-------DCKTEGCVINIASRQTGEPLVRIPASISKHLKPHQ 980

Query: 729  VVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTAL 788
            + G+RFMW+N I+S+ KVKSGD GLGCILAH+MGLGKT QVIAFLYT MR+V+L  +T L
Sbjct: 981  LCGVRFMWDNCIESVEKVKSGDVGLGCILAHSMGLGKTLQVIAFLYTVMRNVDLNFKTVL 1040

Query: 789  IVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYT 846
            +V PVNVLHNWK+EF KWRP+E+ PL V ML D SRD   RA LL  W+ KGGV LIGY 
Sbjct: 1041 VVVPVNVLHNWKREFEKWRPAEVAPLEVSML-DTSRDNATRASLLKSWKEKGGVMLIGYA 1099

Query: 847  AFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRI 905
            AFRNLS G HVKD+     +C  LQD G DI+VCDE H IKN +AD T AL++VK  RRI
Sbjct: 1100 AFRNLSTGSHVKDKETRDTLCKCLQDPGADIVVCDEGHTIKNDKADITIALQRVKSGRRI 1159

Query: 906  ALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRS 965
            A+TGSPLQNNLMEYYCMVDFVR GFLG    FRN+ QNPI NGQH +ST +DVK M +  
Sbjct: 1160 AMTGSPLQNNLMEYYCMVDFVRPGFLGPQAIFRNKVQNPIANGQHADSTPDDVKKMKRTV 1219

Query: 966  HILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNE 1025
            HIL+++L GFVQR DM V+K +LPPK V+VI+V+LSPLQ++LYK+FL L          E
Sbjct: 1220 HILHKRLSGFVQRRDMTVLKDELPPKCVWVISVRLSPLQKQLYKKFLSL---------CE 1270

Query: 1026 KIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR--EDAEDSSSDENMDYNVVIGEK-PR 1082
              R   F  Y  LA+IWNHP +L + K++        D+E   S EN       G+  P+
Sbjct: 1271 TGRSKLFDHYHVLAKIWNHPDLLAIAKEQRLNEEFIVDSEKEDSAEN-------GQGCPK 1323

Query: 1083 NMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQ 1142
              +        D F   +W  ++L E     L+ SGKMVL++ +L++ S+ G+K+LVFSQ
Sbjct: 1324 RAS-----PEADSF---EWCEEILKESKRDVLENSGKMVLIMTLLSLNSSRGEKTLVFSQ 1375

Query: 1143 SIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKC 1202
            S+ TLDLIE +L  +P  G Q  +W KGK+W RLDG T +S RQ++ + FN+P N  +KC
Sbjct: 1376 SLHTLDLIENFLDTIPLGGSQ-DVWNKGKEWLRLDGNTTASRRQQIADIFNDPNNTAIKC 1434

Query: 1203 TLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTME 1262
             LIST+AGSLG N+  ANRVIIVDGSWNPT+DLQA++RAWRYGQTKPVF YRL+A+GTME
Sbjct: 1435 LLISTKAGSLGTNMTGANRVIIVDGSWNPTHDLQALFRAWRYGQTKPVFVYRLLAYGTME 1494

Query: 1263 EKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            EKIY RQ+TKEG+AARV+D  QV R ++ +++  ++   DD++
Sbjct: 1495 EKIYNRQLTKEGIAARVLDAHQVGRHLNADDLELMYTLDDDDD 1537



 Score =  217 bits (552), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/387 (37%), Positives = 220/387 (56%), Gaps = 26/387 (6%)

Query: 9   EKHEEVEDIESDSGDSFI-VDSESDEPSISGQDDGLHLEEHLTEEEIEELIAEFLEVESK 67
           EK ++  +++ + GD  +  +S  DE    G       E   ++EE+  +I   +E+ES+
Sbjct: 122 EKEDKACEVQREEGDGGVEKNSSEDEYDGDGYMSESSSEGSKSDEEVTRMIDWLVEIESE 181

Query: 68  AAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDELETESA 127
           +A+AQE LE ES+ K++ EVR EL++ L G +L+ AV  EM  Y   W+  L ELE ESA
Sbjct: 182 SADAQEHLEDESVKKVEEEVRLELSETLSGQELDMAVSCEMADYVSIWKKTLLELEEESA 241

Query: 128 HLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGAEDFLQ 187
            L ++L+ AG+ LP L++ IE Q   GC T+ W+ RAHW G+Q   +  E +  AE  L 
Sbjct: 242 KLQDRLEDAGVSLPDLFKAIEKQAAEGCMTDTWRNRAHWAGTQAPEDFAEVLHSAEKDLD 301

Query: 188 TERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVSEKCAAF 247
             RPV RR GKL+EEGASGFL++K+ +  +  G        W + +  F   +S   + F
Sbjct: 302 ALRPVIRRRGKLVEEGASGFLERKVNDVDTVKGS-----TGWEAFDSAFQPKLS-AVSLF 355

Query: 248 GSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKELALSEE 307
            SK WA+VY ASTP+QAA +GLKFPGVD+V++I D+D +      A A+A E E  L+E 
Sbjct: 356 ESKKWAAVYSASTPEQAARLGLKFPGVDKVDDIADIDQHVG--MEAAALAEESEFGLTEH 413

Query: 308 QRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQKEIGSVDWTIEDSAVETRPLVDASK 367
           Q+K  ++V+EEDD    R++Q  +  RR R ++ Q +  + D  I         + +   
Sbjct: 414 QKKTMKRVREEDDV---RQMQKKIGARRVRAMASQVKSSTSDVNI---------ITEPPA 461

Query: 368 SLSNKKTDDGDM-----PGNNNEVALQ 389
            LS  + D  D+     P N +E+ L+
Sbjct: 462 VLSKLQPDTIDLGTAGDPQNTDELRLE 488


>gi|387965704|gb|AFK13833.1| SNF2 domain-containing protein ATRX/CHR20 [Beta vulgaris subsp.
            vulgaris]
          Length = 1592

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/548 (67%), Positives = 431/548 (78%), Gaps = 35/548 (6%)

Query: 818  MLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL 877
            M       +RAELL KWR KGGVFL+GY++FRNLS GK++KDR  A+EIC+ALQ+GPDIL
Sbjct: 938  MCATFREQQRAELLMKWRRKGGVFLMGYSSFRNLSLGKNMKDRKSAKEICYALQEGPDIL 997

Query: 878  VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEF 937
            VCDEAH+IKNT+A+ TQALK VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS HEF
Sbjct: 998  VCDEAHIIKNTKAEITQALKLVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSMHEF 1057

Query: 938  RNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 997
            RNRFQNPIE GQH NST+ DV+IMNQRSHILYEQLKGFVQRMDM+VVKKDLPPKTVFV+ 
Sbjct: 1058 RNRFQNPIEYGQHANSTANDVRIMNQRSHILYEQLKGFVQRMDMSVVKKDLPPKTVFVVA 1117

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
            VK S LQR+LYK+FLD+HGFT  + S E IRK+FFA YQAL+QI NHP ILQ+ KD+GY 
Sbjct: 1118 VKSSSLQRKLYKKFLDVHGFTGHKASCEGIRKNFFAAYQALSQICNHPWILQMMKDRGYA 1177

Query: 1058 SRE-DAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
             RE   +DSSSDENMD N+ IGEK +        K D GF  + WW++LL+++ ++E++Y
Sbjct: 1178 KREDSPDDSSSDENMDSNLGIGEKAK-------AKTDKGFLHEGWWDNLLNQYNHQEIEY 1230

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            SGKMVLLLDILTMC+ +GDK+LVFSQSI TLDLIE YLSKLP                  
Sbjct: 1231 SGKMVLLLDILTMCTEIGDKALVFSQSIATLDLIESYLSKLP------------------ 1272

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
              R E SERQ+LV+ FN P N RVKCTLISTRAG+LGINL++ANRV+I+DGSWNPT+DLQ
Sbjct: 1273 --RLEGSERQRLVDAFNNPQNGRVKCTLISTRAGALGINLYAANRVVIIDGSWNPTHDLQ 1330

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            AIYRAWRYGQ KPV+AYRL+AHGT+EEKIYKRQV KEGLAARVVDRQQV R++SKEE+  
Sbjct: 1331 AIYRAWRYGQKKPVYAYRLVAHGTLEEKIYKRQVKKEGLAARVVDRQQVLRSMSKEEISD 1390

Query: 1297 LFEFGDDENPDPLTAVSKENGQGSSQNTNC-ALKHKLPLSHEGC-----SDKLMESLLGK 1350
            LF FGDDEN D L  + ++NG    +  NC  +++   LS   C     SDKLME LL +
Sbjct: 1391 LFNFGDDENLDLLPDLIEKNGH-MIETFNCKKVENSSKLSSCDCPRSCSSDKLMEKLLDR 1449

Query: 1351 HHPRCAVN 1358
            H  R  +N
Sbjct: 1450 HRLRWIMN 1457



 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 399/926 (43%), Positives = 519/926 (56%), Gaps = 155/926 (16%)

Query: 1   MEDKHSE-DEKHEEVEDIESDSGDSFIVDSESDEP--SISGQDDGLHLEEH--------- 48
           ME K S+ ++ +E+V+D +    DSF+  S  ++   ++ G    L   EH         
Sbjct: 1   MERKDSDLEDNNEKVDDDDGVYEDSFLEVSSEEDEEVALDGSVSELEASEHGIPNFTLTS 60

Query: 49  -----LTEEEIEELIAEFLEVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAA 103
                LTEEEIEEL+ E +E ESKAAEAQEALE ESL K++ EVREELA  L G+DL+ A
Sbjct: 61  DEMAPLTEEEIEELVDELIEKESKAAEAQEALEEESLQKVEQEVREELAANLQGNDLDKA 120

Query: 104 VEDEMTVYKEQWEAALDELETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRR 163
           V DEM  ++E+WEA LDELETESAHLLEQLDGA ++LPS+Y+ IE+  PNGC TEAWK+R
Sbjct: 121 VADEMAAFREEWEATLDELETESAHLLEQLDGANVDLPSIYKWIESNAPNGCLTEAWKKR 180

Query: 164 AHWVGSQVTSEMRESIAGAEDFLQTERPVRRR-HGKLLEEGASGFLQKKIANDGSENGGK 222
            HWVG++V S+  ESI  AE  LQ  RPVRR  H  L       ++        + N G 
Sbjct: 181 IHWVGTEVASDAVESIKNAEKDLQILRPVRRYLHAYLSLSFLIAWVTFFCGEGSTGNPG- 239

Query: 223 EVSDINWNSVNKIFSGDVSEKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIED 282
               + W+S+NK+FS   S++  AFGSK WASVYLASTPQQAAAMGLKFPGV+EVEEI+D
Sbjct: 240 ----VEWSSLNKLFSDHSSKEDIAFGSKQWASVYLASTPQQAAAMGLKFPGVEEVEEIDD 295

Query: 283 VDGNSDDPFVADAIANEKELALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHRKISKQ 342
           +D +  DPFVADAIANEKEL LSEEQRKK++KVKEEDD + D+KLQLHL RRR RK  +Q
Sbjct: 296 IDDDPSDPFVADAIANEKELDLSEEQRKKYKKVKEEDDLSFDQKLQLHLNRRRRRKRIEQ 355

Query: 343 KEIGSVDWTIEDSAVETRPLVDASKSLSNKKTDDGDMPGNNNEVAL----QNLETGVLES 398
                                       N +  +G +  ++NEVA     +  E G    
Sbjct: 356 ----------------------------NSRHAEGVL--SDNEVATCHDSKVAELGNCGL 385

Query: 399 SVKERSLSNGISSVSDSALPDSSELRGIKRSNESEEPNSEKKRSRTIIIGSDEADVVKD- 457
           S  +   +N  S  S    P+     G KR+ E EE + E KRSRT I+ SD      + 
Sbjct: 386 SADDLEENNSPSGDSSERQPNEPSC-GSKRACEDEELDHEAKRSRTGILESDSETQTPNR 444

Query: 458 ------ECSTKLEDHSVSPENINDAATDNSLHSQSLSEKFYCTACNNVAIEVHPHPILNV 511
                 E +  + +  +  + I++ A       +++ EKF+CT C  V  E+  HP+L V
Sbjct: 445 NFIDSREANDMVVEEDLFAQEIDNEAMKVDTSLENVYEKFFCTTCGKVTKEICEHPLLKV 504

Query: 512 IVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLS 571
           IVC  CKC +E K+           C+   +  D    +  K+        RN SEAC  
Sbjct: 505 IVCGQCKCFIEAKIRC---------CLKVLKVLDPGCIRKLKS-------NRN-SEACSI 547

Query: 572 DEVQASCW-----QCCCCSPSLLKRLTSELGRAMGSENLIVSSSESDSENSDADNNLKIG 626
             ++ +         C     LL++LT +L +A+GS +  V SS+SD+++SD ++     
Sbjct: 548 SRLEGTSAVPQQRMACMTHEDLLQQLTLKLEKAVGSPDSTVFSSDSDTDSSDDEDGASTS 607

Query: 627 GKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLS 686
             R  KKKIRRILDD ELGEETKRKIA+EKERQERLKSL+ QFSS   +MN+ T +G L 
Sbjct: 608 TNRTGKKKIRRILDDTELGEETKRKIAMEKERQERLKSLKAQFSSIPMMMNASTCNGSLP 667

Query: 687 AGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQ-----------VVGIRFM 735
            GAS EVLGD  TG+IVNVVRE+GE+AVRIP SISAKLK HQ            + +  +
Sbjct: 668 EGASSEVLGDPSTGFIVNVVREEGEDAVRIPPSISAKLKTHQRTIRTEAIFPDSLRLTAL 727

Query: 736 WENIIQSIRKVKSG-----------------DKGLGCILAHTMGLGKTFQV--IAFLY-- 774
              +I  + + + G                   GL  +   T     TFQV  I F++  
Sbjct: 728 LPIVIAIVARTRGGIVANKSSVEFESYLSSESLGLVSVRFKTRIPKYTFQVAGIRFMWEN 787

Query: 775 --TAMRSVNLG----------------------------------LRTALIVTPVNVLHN 798
              ++R+V  G                                  L+TAL+VTPVNVLHN
Sbjct: 788 IIQSIRNVKAGDKGLGCILAHTMGLGKTFQVIAFLYTAMRGANLGLKTALVVTPVNVLHN 847

Query: 799 WKQEFMKWRPSELKPLRVFMLEDVSR 824
           W+QEF KW P E KPLRV+MLED SR
Sbjct: 848 WRQEFKKWEPREFKPLRVYMLEDKSR 873


>gi|348516846|ref|XP_003445948.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
            [Oreochromis niloticus]
          Length = 1961

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 291/751 (38%), Positives = 438/751 (58%), Gaps = 74/751 (9%)

Query: 629  RKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAG 688
            RK +KKIR+IL D +L  ET+  +   KE +ER K +  + + + KL   + ++      
Sbjct: 976  RKGRKKIRKILKDDKLRTETRDAL---KEEEERRKRIAEREALREKLREVIVVE------ 1026

Query: 689  ASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKS 748
             S +V+    T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K++ 
Sbjct: 1027 ESSQVVCPITTKLVLDEDEETKEPMVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKIEK 1086

Query: 749  GDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP 808
               G GCILAH MGLGKT QV+ FL+T +    L   TAL+V P+N + NW  EF KW+ 
Sbjct: 1087 S-AGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLDFTTALVVCPLNTVLNWLNEFEKWQE 1145

Query: 809  S--ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE 865
               + + L V  L  V R + RA  L +W   GGV ++GY  +RNL+ G+++K + +   
Sbjct: 1146 GMKDEESLEVTELATVKRPQERAYALQRWHEMGGVMIMGYEMYRNLTQGRNIKSKKLKET 1205

Query: 866  ICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                L + GPD+++CDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+
Sbjct: 1206 FQKTLVEPGPDLVICDEGHILKNEASAVSKAMNSIRTRRRIVLTGTPLQNNLIEYHCMVN 1265

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F++E  LGS  EFRNRF NPI+NGQ  +ST +DV++M +R+HILYE L G VQR D   +
Sbjct: 1266 FIKENLLGSVKEFRNRFINPIQNGQCADSTLQDVRVMKKRAHILYEMLAGCVQRKDYTAL 1325

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQALAQIW 1042
             K LPPK  +V++V+++P+Q +LY+ +L+      + V   + R     F  +Q L++IW
Sbjct: 1326 TKFLPPKHEYVLSVRMTPIQAKLYRYYLEHFTGVGNAVEGGRGRAGTKLFQDFQMLSRIW 1385

Query: 1043 NHPGILQL----TKDKGYPSREDAEDSSSDENMDYNVVIG-------------------- 1078
             HP  LQL     +++G+   +  +D  + E  + ++ +                     
Sbjct: 1386 THPWCLQLDYISKENRGFFDEDSMDDFIASETEESSMSLTSEDEKIKKKKKQGKGKKKGS 1445

Query: 1079 --------EKPRNMNDFLQGKNDDGFFQ------------------KDWWNDLLHEHTYK 1112
                    E  +  N   +G+N +G  +                   DW  + + E   +
Sbjct: 1446 DDSDSDDVEVIKEWNTSSRGRNGEGRNRAEPVDEPRPSGSAPGSPTADWHKEFVTEADAE 1505

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL------ 1166
             L++SGKM+LL +IL M   + DK LVFSQS+ +LDLIE +L    R   + K+      
Sbjct: 1506 ILEHSGKMMLLFEILRMAEEVDDKVLVFSQSLISLDLIEDFLELACRAKDEEKISPYKGE 1565

Query: 1167 --WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
              W +  D+YRLDG T ++ R+K  E FN+  N R +  LISTRAGSLGINL +ANRVII
Sbjct: 1566 GKWYRNIDYYRLDGSTNATTRKKWAEEFNDTSNTRGRLFLISTRAGSLGINLVAANRVII 1625

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
             D SWNP+YD+Q+I+R +R+GQ K V+ YR +A GTMEEKIY+RQVTK+ L+ RVVD+QQ
Sbjct: 1626 FDASWNPSYDIQSIFRVYRFGQLKTVYVYRFLAQGTMEEKIYERQVTKQSLSFRVVDQQQ 1685

Query: 1285 VHRTISKEEMLHLFEFGDDENPDPLTAVSKE 1315
            + R  +  E+  L+ F  D   DP    SK+
Sbjct: 1686 IERHFTMNELAELYTFEPDLLDDPSEKKSKK 1716



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 6/121 (4%)

Query: 486 SLSEKFYCTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWC 540
           +L +K  CTAC     +     V  HP+L V++CK C          +D+D  +  C WC
Sbjct: 106 TLQKKVNCTACGKQVNQFQRNSVFVHPVLKVLICKSCYKYYTSDDISRDSDGMDEQCRWC 165

Query: 541 GRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTSELGRA 599
                L+ C  C   FC  C+ RN+    LS    + S W C  C    L+ L S+  R 
Sbjct: 166 AEGGKLICCDYCNNAFCKKCILRNLGRKELSGITDENSKWHCYVCRSEPLQDLVSKCSRI 225

Query: 600 M 600
           M
Sbjct: 226 M 226


>gi|326924514|ref|XP_003208472.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
            [Meleagris gallopavo]
          Length = 2479

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 287/690 (41%), Positives = 404/690 (58%), Gaps = 82/690 (11%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  SI  +LK HQV G++FMW+   +S++K K+   G GCILA
Sbjct: 1518 TKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTS-PGSGCILA 1576

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L  RTAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1577 HCMGLGKTLQVVSFLHTVLLCDKLNFRTALVVCPLNTALNWLNEFEKWQEGLEDDEKLEV 1636

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+ +GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1637 CELATVKRPQERSYMLQRWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1696

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1697 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1756

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1757 KEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEY 1816

Query: 995  VITVKLSPLQRRLYKRFLD--LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD              K     F  +Q L++IW HP  LQL  
Sbjct: 1817 VLEVRMTPIQCKLYQYYLDHLTGVGGGSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1876

Query: 1051 --TKDKGYPSREDAED---SSSDE------------------------------------ 1069
               ++KGY   +  +D   S SDE                                    
Sbjct: 1877 ISKENKGYFDEDSMDDFIASDSDETSMSLSSDDYAKXLRKKKYRKGKKGKKECSSSGSGS 1936

Query: 1070 NMDYNVV-----------------IGEKPRNMNDFLQGK----NDDGFFQKDWWNDLLHE 1108
            + D  V+                 +G  P ++    +GK    ++ G    DW+ D + +
Sbjct: 1937 DNDVEVIKVWNSRSRGGGEGNAEELGNNPSSVIKSEEGKATSSSNPGSPAPDWYKDFVTD 1996

Query: 1109 HTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL----------SKLP 1158
               + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L           K P
Sbjct: 1997 ADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKTDKEKPP 2056

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
                +GK W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+AGSLGINL +
Sbjct: 2057 IYKGEGK-WFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA 2115

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANRVII D SWNP+YD+Q+I+R +R+GQ+KPVF YR +A GTME+KIY RQVTK+ L+ R
Sbjct: 2116 ANRVIIFDASWNPSYDIQSIFRVYRFGQSKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFR 2175

Query: 1279 VVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2176 VVDQQQVERHFTMNELTELYTFEPDLLDDP 2205



 Score = 63.9 bits (154), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 493 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK C          +D+D  +  C WC    +L+
Sbjct: 230 CTACGQQVNHFQKDSIYRHPTLKVLICKTCYRYYMSDDISRDSDGMDEQCRWCAEGGNLI 289

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 290 CCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYSCHPEPLLDLVT 337


>gi|363732842|ref|XP_420305.3| PREDICTED: transcriptional regulator ATRX [Gallus gallus]
          Length = 2420

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 287/687 (41%), Positives = 404/687 (58%), Gaps = 78/687 (11%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
             T  +++   E  E  V++  SI  +LK HQV G++FMW+   +S++K K+   G GCIL
Sbjct: 1462 TTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTS-PGSGCIL 1520

Query: 758  AHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLR 815
            AH MGLGKT QV++FL+T +    L  RTAL+V P+N   NW  EF KW+    + + L 
Sbjct: 1521 AHCMGLGKTLQVVSFLHTVLLCDKLNFRTALVVCPLNTALNWLNEFEKWQEGLEDDEKLE 1580

Query: 816  VFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-G 873
            V  L  V R + R+ +L +W+ +GGV +IGY  +RNL+ G++VK R +      AL D G
Sbjct: 1581 VCELATVKRPQERSYMLQRWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPG 1640

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
            PD +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS
Sbjct: 1641 PDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGS 1700

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
              EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  
Sbjct: 1701 IKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYE 1760

Query: 994  FVITVKLSPLQRRLYKRFLD--LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQL- 1050
            +V+ V+++P+Q +LY+ +LD        +     K     F  +Q L++IW HP  LQL 
Sbjct: 1761 YVLEVRMTPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLD 1820

Query: 1051 ---TKDKGYPSREDAED---SSSDE--------------------------------NMD 1072
                ++KGY   +  +D   S SDE                                + D
Sbjct: 1821 YISKENKGYFDEDSMDDFIASDSDETSMSLSSDDYAKKKKSKGKKGKKECSSSGSGSDND 1880

Query: 1073 YNVV-----------------IGEKPRNMNDFLQGK----NDDGFFQKDWWNDLLHEHTY 1111
              V+                 +G  P  +    +GK    ++ G    DW+ D + +   
Sbjct: 1881 VEVIKVWNSRSRGGGEGNAEELGNNPSLVVKSEEGKATSSSNPGSPAPDWYKDFVTDADA 1940

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL----------SKLPRPG 1161
            + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L           K P   
Sbjct: 1941 EVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKTDKEKPPIYK 2000

Query: 1162 KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
             +GK W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+AGSLGINL +ANR
Sbjct: 2001 GEGK-WFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANR 2059

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            VII D SWNP+YD+Q+I+R +R+GQ+KPVF YR +A GTME+KIY RQVTK+ L+ RVVD
Sbjct: 2060 VIIFDASWNPSYDIQSIFRVYRFGQSKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2119

Query: 1282 RQQVHRTISKEEMLHLFEFGDDENPDP 1308
            +QQV R  +  E+  L+ F  D   DP
Sbjct: 2120 QQQVERHFTMNELTELYTFEPDLLDDP 2146



 Score = 64.7 bits (156), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 493 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK C          +D+D  +  C WC    +L+
Sbjct: 172 CTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLI 231

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 232 CCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYSCHPEPL 274


>gi|319655732|ref|NP_956947.2| transcriptional regulator ATRX [Danio rerio]
          Length = 2013

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 293/749 (39%), Positives = 426/749 (56%), Gaps = 74/749 (9%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +KKIR+I+ D +L  ET+  +   KE ++R K +  +   + KL  ++ +        
Sbjct: 1029 KGRKKIRKIIKDDKLRTETRDAL---KEEEDRRKRIAERERLREKLRETIEVK------E 1079

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
            S +V     T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+RKV+  
Sbjct: 1080 SSQVTCPITTKLVLDEDEETKEPLVQVHRNMVTKLKPHQVDGVQFMWDCCCESVRKVEKS 1139

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS 809
              G GCILAH MGLGKT QV+  L+T +    L   TAL+V P+N + NW  EF KW+  
Sbjct: 1140 -AGSGCILAHCMGLGKTLQVVTLLHTVLLCEKLNFSTALVVCPLNTVLNWLNEFEKWQEG 1198

Query: 810  --ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
              + + L V  L  V R + RA  L +W+  GGV ++GY  +RNL+ G+++K + +    
Sbjct: 1199 LKDEESLEVTELATVKRPQERAYALQRWQEDGGVMIMGYEMYRNLTQGRNIKSKKLKETF 1258

Query: 867  CHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
               L D GPD ++CDE H++KN  +  ++A+  +K +RR+ LTG+PLQNNL+EY+CMV+F
Sbjct: 1259 QKTLVDPGPDFVICDEGHVLKNEASAVSKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNF 1318

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            ++E  LGS  EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + 
Sbjct: 1319 IKENLLGSVKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRRDYTALT 1378

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQALAQIWN 1043
            K LPPK  +V+ V+LSP+Q +LY+ +LD        + + K R     F  +Q L++IW 
Sbjct: 1379 KFLPPKHEYVLAVRLSPIQCKLYRYYLDHFTGVGSALESGKGRAGTKLFQDFQMLSRIWT 1438

Query: 1044 HPGILQL----TKDKGYPSREDAEDSSSDENMDYNVVI---------------------- 1077
            HP  LQL     ++KGY   +  E+  + E  + ++ +                      
Sbjct: 1439 HPWCLQLDYISKENKGYFDEDSMEEFIASETEESSMSLTSEDEKPKRKKKRGRGKDQSSD 1498

Query: 1078 ------------------GEKPRNMN------DFLQGKNDDGFFQKDWWNDLLHEHTYKE 1113
                              G  P   N      +     +  G    +W+ + + E   + 
Sbjct: 1499 KSDSDDLEVIKEWNTSSRGGNPEGRNRAEPVEEVRPSNSGPGSPSPEWYKEFVSEEDAEV 1558

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK-------- 1165
            L +SGKMVLL +IL +   + DK LVFSQS+ +LDLIE +L    R  ++GK        
Sbjct: 1559 LTHSGKMVLLFEILRLAEEVDDKVLVFSQSLISLDLIEDFLELAGRAKEEGKESPYKGEG 1618

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +  D+YRLDG T +  R+K  E FN+  N R +  LISTRAGSLGINL +ANRVII 
Sbjct: 1619 KWFRNIDYYRLDGSTNALTRKKWAEDFNDISNVRGRLFLISTRAGSLGINLVAANRVIIF 1678

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP+YD+Q+I+R +R+GQ K V+ YR +A GTMEEKIY RQV K+ L+ RVVD+QQ+
Sbjct: 1679 DASWNPSYDIQSIFRVYRFGQVKTVYVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQI 1738

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSK 1314
             R  +  E+  L+ F  D+  DP    SK
Sbjct: 1739 ERHFTMNELTELYTFEPDQLDDPSEKKSK 1767



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 6/110 (5%)

Query: 487 LSEKFYCTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCG 541
           L E F CTAC           +  HP L+V++CK C          KD +  +  C WC 
Sbjct: 116 LQEIFNCTACGQQVNHFQKDSIFQHPALHVLICKSCFKYYMSDDISKDDEGMDEQCRWCA 175

Query: 542 RSSDLVSCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLK 590
              +L+ C  C   FC  C+ RN+    LS+ + + S W C  C P  L+
Sbjct: 176 EGGNLMCCDYCSNAFCKKCILRNLGRKELSEIMSEQSKWHCYICCPEPLQ 225


>gi|410914026|ref|XP_003970489.1| PREDICTED: transcriptional regulator ATRX-like [Takifugu rubripes]
          Length = 2022

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 286/744 (38%), Positives = 434/744 (58%), Gaps = 74/744 (9%)

Query: 629  RKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAG 688
            RK +KKIR+IL D +L  ET+  +   KE ++R K +  +   + KL   + ++      
Sbjct: 1036 RKGRKKIRKILKDDKLRTETRDAL---KEEEDRRKRIAEREELRKKLREVIVVN------ 1086

Query: 689  ASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKS 748
             S +V     T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+RK+K 
Sbjct: 1087 ESSQVTCPITTKLVLDEDEETKEPVVQVHLNLVTKLKPHQVDGVQFMWDCCCESVRKIKK 1146

Query: 749  GDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP 808
               G GCILAH MGLGKT QV+ FL+T +    L   TAL+V P+N + NW  EF KW+ 
Sbjct: 1147 S-AGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLKFSTALVVCPLNTVLNWLNEFEKWQE 1205

Query: 809  S--ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE 865
               + + L V  L  V R + R+  L +W   GGV ++GY  +RNL+ G+++K + +   
Sbjct: 1206 GMKDEESLEVTELATVKRPQERSFALQQWHESGGVMIMGYEMYRNLTQGRNIKSKKLKET 1265

Query: 866  ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                L D GPD+++CDE H++KN  +  ++A+  +K +RRI LTG+PLQNNL+EY+CMV+
Sbjct: 1266 FQKTLVDPGPDLVICDEGHILKNEVSAVSKAMNSIKTRRRIVLTGTPLQNNLVEYHCMVN 1325

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F++E  LGS  EFRNRF NPI+NGQ  +ST++DV++M +R+HILYE L G +QR D   +
Sbjct: 1326 FIKENLLGSLKEFRNRFINPIQNGQCADSTAQDVRLMKKRAHILYEMLAGCIQRKDYTAL 1385

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQALAQIW 1042
             K LPPK  +V++++++PLQ +LY+ +L+      + +   + R     F  +Q L++IW
Sbjct: 1386 TKFLPPKHEYVLSIRVTPLQCKLYRYYLEHFTGVGNALEGGRGRAGTKLFQDFQMLSRIW 1445

Query: 1043 NHPGILQL----TKDKGYPSREDAEDSSSDENMDYNVVIG-------------------- 1078
             HP  LQL     +++G+   +  ++  + E  + ++ +                     
Sbjct: 1446 THPWCLQLDYISKENRGFFDEDSMDEFIASETEESSMSLTSEDEKIKKKKKREKGKKKGS 1505

Query: 1079 --------EKPRNMNDFLQGKNDDGFFQK------------------DWWNDLLHEHTYK 1112
                    E  +  N   +G+N +G  ++                  DW  + + E   +
Sbjct: 1506 DDSDSDDVEVIKEWNTSSRGRNGEGRNRRASVEEAPPTGSAPGSPSADWHKEFVTEADAE 1565

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL------ 1166
             L++SGK+++L ++L M   + DK LVFSQS+ +LDLIE +L    R   + K+      
Sbjct: 1566 ILEHSGKIMILFEVLRMAEEVEDKVLVFSQSLISLDLIEDFLELSCRAKDEDKISPYKGD 1625

Query: 1167 --WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
              W +  D+YRLDG T ++ R+K  E FN+  N R +  LISTRAGSLGINL +ANRVII
Sbjct: 1626 GKWFRNIDYYRLDGSTSATTRKKWAEEFNDTSNVRGRLFLISTRAGSLGINLVAANRVII 1685

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
             D SWNP+YD+Q+I+R +R+GQ K VF YR +A GTMEEKIY RQVTK+ L+ RVVD+QQ
Sbjct: 1686 FDASWNPSYDVQSIFRVYRFGQHKTVFVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQ 1745

Query: 1285 VHRTISKEEMLHLFEFGDDENPDP 1308
            + R  +  E+  L+ F  D   DP
Sbjct: 1746 IERHFTTNELAELYTFEPDMVDDP 1769



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 489 EKFYCTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRS 543
           +K  CTAC     +     V+ HP+L V++CK C          +D+D  +  C WC   
Sbjct: 100 QKVSCTACGRQVNQFQRNSVYEHPVLKVLICKSCYKYYTSDDINRDSDGMDEQCRWCAEG 159

Query: 544 SDLVSCKSCKTLFCTTCVKRNISE---ACLSDEVQASCWQCCCCSPSLLKRLTSELGRAM 600
             L+ C  C   FC  C+ RN+     + ++DE   S W C  C    L+ L S+  R +
Sbjct: 160 GKLICCDYCNNAFCKKCILRNLGRKELSVITDE--NSKWHCYVCRSEPLQDLISKCSRVL 217


>gi|47222924|emb|CAF99080.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2099

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 290/745 (38%), Positives = 435/745 (58%), Gaps = 75/745 (10%)

Query: 629  RKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAG 688
            RK +KKIR+IL D +L  ET+  +  E+ER++R+   +     + KL   + ++      
Sbjct: 1027 RKGRKKIRKILKDDKLRTETRDALKEEEERRKRIAERE---ELRKKLREVIVVE------ 1077

Query: 689  ASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKS 748
             S +V     T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+RK++ 
Sbjct: 1078 ESSQVACPITTKLVLDEDDETKEPMVQVHRNLVTKLKPHQVDGVQFMWDCCCESMRKIQK 1137

Query: 749  GDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP 808
               G GCILAH MGLGKT QV+ FL+T +    L   TAL+V P+N + NW  EF KW+ 
Sbjct: 1138 S-AGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLKFTTALVVCPLNTVLNWLNEFEKWQE 1196

Query: 809  S--ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE 865
               + + L V  L  V R + RA  L +W+  GGV ++GY  +RNL+ G+++K + +   
Sbjct: 1197 GMKDDESLEVTELATVKRPQERAFALQQWQESGGVMIMGYEMYRNLTQGRNIKSKKLKET 1256

Query: 866  ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                L D GPD+++CDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+
Sbjct: 1257 FQKTLVDPGPDLVICDEGHILKNEVSAVSKAMNSIRTRRRIVLTGTPLQNNLVEYHCMVN 1316

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F++E  LGS  EFRNRF NPI+NGQ  +ST++DV++M +R+HILYE L G VQR D   +
Sbjct: 1317 FIKENLLGSLKEFRNRFINPIQNGQCADSTAQDVRLMKKRAHILYEMLAGCVQRKDYTAL 1376

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQALAQIW 1042
             K LPPK  +V+++++SPLQ +LY+ +L+      + +   + R     F  +Q L++IW
Sbjct: 1377 TKFLPPKHEYVLSIRVSPLQCKLYRYYLEHFTGVGNALEGGRGRAGTKLFQDFQMLSRIW 1436

Query: 1043 NHPGILQL----TKDKGYPSREDAEDSSSDENMDYNVVIG-------------------- 1078
             HP  LQL     +++G+   +  ++  + E  + ++ +                     
Sbjct: 1437 THPWCLQLDYISKENRGFFDEDSMDEFIASETEESSMSLTSEDEKMKKKKKRERGKKKGS 1496

Query: 1079 --------EKPRNMNDFLQGKNDDGFFQK-------------------DWWNDLLHEHTY 1111
                    E  +  N   +G+N +G  ++                   DW  + + E   
Sbjct: 1497 DDSDSDDVEVIKEWNTSSRGRNGEGRNRRASVEEVAQPAGSAPGSPSADWHKEFVTEADA 1556

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR--------PGKQ 1163
            + L++SGKM+LL +IL M   + DK LVFSQS+ +LDLIE +L    R        P K 
Sbjct: 1557 EILEHSGKMMLLFEILRMAEEVEDKVLVFSQSLISLDLIEDFLELSCRAKDEDKVSPYKG 1616

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
               W +  D+YRLDG T ++ R+K  E FN+  N R +  LISTRAGSLGINL +ANRVI
Sbjct: 1617 EGKWFRNIDYYRLDGSTSATTRKKWAEEFNDTSNVRGRLFLISTRAGSLGINLVAANRVI 1676

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            I D SWNP+YD+Q+I+R +R+GQ K VF YR +A GTMEEKIY RQVTK+ L+ RVVD+Q
Sbjct: 1677 IFDASWNPSYDVQSIFRVYRFGQHKTVFVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQ 1736

Query: 1284 QVHRTISKEEMLHLFEFGDDENPDP 1308
            Q+ R  +  E+  L+ F  +   DP
Sbjct: 1737 QIERHFTTNELAELYTFEPEMLDDP 1761



 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 535 CYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISE---ACLSDEVQASCWQCCCCSPSLLKR 591
           C   WC     L+ C  C   FC  C+ RN+     + ++DE   S W C  C    L+ 
Sbjct: 110 CLRRWCAEGGKLICCDYCNNAFCKKCILRNLGRRELSVITDE--NSKWHCYVCRSEPLQD 167

Query: 592 LTSELGRAM 600
           L S+    M
Sbjct: 168 LVSKCQSVM 176


>gi|348538794|ref|XP_003456875.1| PREDICTED: transcriptional regulator ATRX-like [Oreochromis
            niloticus]
          Length = 1926

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 294/760 (38%), Positives = 441/760 (58%), Gaps = 75/760 (9%)

Query: 610  SESDSENSDADNNLKIGGKRK----QKKKIRRILDDAELGEETKRKIAIEKERQERLKSL 665
            S+S SE +D ++  +   + K     +KKIRRI++D  L  ET+  +  E+ER +RL + 
Sbjct: 1005 SDSSSEKTDQEDAPEEASENKVTPKGRKKIRRIIEDENLRAETQEALREEEERCKRLANR 1064

Query: 666  QVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLK 725
              Q   + ++   + ++ +LS     +V+    T  +++   E  +  V++  ++   LK
Sbjct: 1065 DQQMEDRREI---IVIEDELS-----QVVCPVTTKLVLDQDEETKKPLVQVHRNLVTILK 1116

Query: 726  AHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLR 785
             HQV G++F+W++  +S++K  S   G GC+LAH MGLGKT QV+ FL+T + S  L  R
Sbjct: 1117 PHQVDGVQFIWDSCCESVKKANSS-PGSGCVLAHCMGLGKTLQVVTFLHTVLLSTELKFR 1175

Query: 786  TALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR---RAELLAKWRAKGGVFL 842
            TAL+V P+N + NW  EF KW+ + +   +V + E  +      R   L +W+  GGV +
Sbjct: 1176 TALVVCPLNTILNWVSEFKKWQ-NNMGEDKVKVTELATMKHTLGRLRALQRWQRDGGVMI 1234

Query: 843  IGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKC 901
            +GY  +R LS    + +     E    L D GPD +VCDE H+++N  ++ ++A+  +K 
Sbjct: 1235 MGYDMYRILSLDCKINNDEWKEEFYRTLVDPGPDFVVCDEGHILRNDGSNISKAMNAIKT 1294

Query: 902  QRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 961
            QRR+ LTG+PLQNNL+EY+CMV+F+++  LGS  EFRNRF NPIENGQ  +ST +DV+IM
Sbjct: 1295 QRRVVLTGTPLQNNLVEYHCMVNFIKKNLLGSLGEFRNRFINPIENGQCADSTPKDVRIM 1354

Query: 962  NQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDR 1021
             +R+H+L+  L G +QR D + +++ LPPK  +V+ V++SPLQ  LY+ +LD     +  
Sbjct: 1355 KKRAHVLHSVLGGCIQRRDYSELRQFLPPKYEYVLAVRVSPLQYNLYRYYLDHFTGVSSL 1414

Query: 1022 VSNEKIRK--SFFAGYQALAQIWNHPGILQ-------------------------LTKDK 1054
             +++K+R   + F  +Q L +IW HP  LQ                         +T+ +
Sbjct: 1415 HNSKKMRPGANLFKDFQVLGRIWTHPWCLQLSYLSKLKKKSKGKAADLPKNAETPMTEAE 1474

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDF---------------LQGKNDDGFFQK 1099
            G+       +     N   + VI      ++DF               L+  + D    +
Sbjct: 1475 GWCEGMKENEGQEGNNTHSSTVI------IDDFKVVQTVEAVETAPIRLKPPSPD----E 1524

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL----- 1154
             W+ DLL E   K L++SGKMVLL +IL M   + DK +VFSQS+ +LDLIE +L     
Sbjct: 1525 RWYKDLLSERDAKILEHSGKMVLLFEILRMAEELEDKVIVFSQSLISLDLIEDFLADSHR 1584

Query: 1155 SKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGI 1214
            ++ P   K    W K  D+YR DG T ++ R+K  + FN P N R +  LIST+AGSLGI
Sbjct: 1585 ARDPSAFKGTGSWVKNVDYYRFDGSTSATLRKKWADEFNNPENVRGRLFLISTKAGSLGI 1644

Query: 1215 NLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEG 1274
            NL +ANRVII D SWNP+YD+Q+IYR +R+GQ K VF YR +A GTMEEKIY RQVTK+ 
Sbjct: 1645 NLVAANRVIIFDASWNPSYDIQSIYRVYRFGQLKQVFVYRFLAQGTMEEKIYDRQVTKQS 1704

Query: 1275 LAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSK 1314
            L+ RVVD+QQ+ R  +  E+  L+ F  D   DP +  SK
Sbjct: 1705 LSFRVVDQQQIERHFTFHELTELYTFEPDLLNDPNSKKSK 1744



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 6/102 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP+L V++CK C          KD D  +  C WC    +L+
Sbjct: 153 CTACGRQVNHFRRDSLYRHPVLKVLICKSCYNYYSSDDISKDCDGMDEQCRWCAEGGNLI 212

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  +  S W C  CSP  L
Sbjct: 213 CCDFCSNAFCKKCILRNLGRKELSG-ILESKWYCYVCSPEPL 253


>gi|3002558|gb|AAC08741.1| ATRX protein [Mus musculus]
          Length = 2476

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 288/685 (42%), Positives = 399/685 (58%), Gaps = 78/685 (11%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+ K K    G GCILA
Sbjct: 1520 TKLVLDENEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVEKTKKS-PGSGCILA 1578

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+   ++ + L V
Sbjct: 1579 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLNDNEKLEV 1638

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1639 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKDIFNKALVDPGP 1698

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  +K +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1699 DFVVCDEGHILKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1758

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1759 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1818

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1819 VLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1878

Query: 1051 --TKDKGY------------PSREDAEDSSSDE------------------NMDYNVVI- 1077
               ++KGY             S E ++  SSDE                    D +V + 
Sbjct: 1879 ISKENKGYFDEDSMDEFIASDSDETSKSLSSDEKKKPKGKKGKKDSSSSGSGSDNDVEVI 1938

Query: 1078 --------GEKPRNMNDFLQGKNDDGFFQKD----------------WWNDLLHEHTYKE 1113
                    G    NM+D   G N     + D                W+ D + +   + 
Sbjct: 1939 KVWNSRSRGGGDGNMDD--TGNNPSVSLKLDESKTTSTSNPSSPAPDWYKDFVTDTDAEV 1996

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK-------- 1165
            L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R   + K        
Sbjct: 1997 LEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKEKPLIYKG 2056

Query: 1166 --LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
               W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+AGSLGINL +ANRVI
Sbjct: 2057 EGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVI 2116

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            I D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQVTK+ L+ RVVD+Q
Sbjct: 2117 IFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQ 2176

Query: 1284 QVHRTISKEEMLHLFEFGDDENPDP 1308
            QV R  +  E+  L+ F  D   DP
Sbjct: 2177 QVERHFTMNELTELYTFEPDLLDDP 2201



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICQPEPL 272


>gi|224145833|ref|XP_002325780.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222862655|gb|EEF00162.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 495

 Score =  508 bits (1307), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/326 (75%), Positives = 273/326 (83%), Gaps = 13/326 (3%)

Query: 1040 QIWNHPGILQLTKDKGYPSRED------AEDSSSDENMDYNVVIGEKPRNMNDFLQGKND 1093
            +IWNHPGILQL K + Y  RED      A+D SSDEN+DYN ++GEK RN NDF+QGK+D
Sbjct: 29   RIWNHPGILQLRKGRDYIGREDNVENVLADDCSSDENVDYNTIVGEKSRNQNDFVQGKSD 88

Query: 1094 DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFY 1153
            DGFFQKDWWNDLLHE+ YK +DYSGKMVLLLDIL M SN+GDK+LVFSQSIPTLDLIE Y
Sbjct: 89   DGFFQKDWWNDLLHENNYKVIDYSGKMVLLLDILVMSSNVGDKTLVFSQSIPTLDLIELY 148

Query: 1154 LSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLG 1213
            LS+L R GK+GK W+KGKDW  LDGRTESSERQ+LVERFN+P NKRVKCTLISTRAGSLG
Sbjct: 149  LSRLTRHGKKGKFWRKGKDW--LDGRTESSERQRLVERFNDPENKRVKCTLISTRAGSLG 206

Query: 1214 INLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKE 1273
            INL++ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKE
Sbjct: 207  INLYAANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKE 266

Query: 1274 GLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNC----ALK 1329
            GLAARVVDRQQV+RT+S+EEMLHLFEFGDDE  D L  + +E     ++N  C    +LK
Sbjct: 267  GLAARVVDRQQVYRTMSREEMLHLFEFGDDEKSDTLNDIGQEYRHADTRNVTCQTVNSLK 326

Query: 1330 HKLPLSHEGC-SDKLMESLLGKHHPR 1354
              +P S   C SDKLMESLL KH  R
Sbjct: 327  ENIPCSQGSCSSDKLMESLLDKHRQR 352


>gi|410915574|ref|XP_003971262.1| PREDICTED: transcriptional regulator ATRX-like [Takifugu rubripes]
          Length = 1807

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 288/746 (38%), Positives = 436/746 (58%), Gaps = 66/746 (8%)

Query: 605  LIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKS 664
            +++S S   S   D+++   I G  + ++KIRRI+DD  L  ET+  +  E+ER +RL  
Sbjct: 934  ILLSDSSEQSGKEDSNDESSIKGTPRGRRKIRRIIDDENLRSETQEALREEEERCKRLAE 993

Query: 665  LQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL 724
             + Q   + ++      +G  +            T  I++   E     V++  ++  +L
Sbjct: 994  REQQMEDRREV-----FEGSCAI----------TTKLILDQDEETKTPLVQVHRNLVTRL 1038

Query: 725  KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGL 784
            K HQV G++FMW+   +S++K KS   G GCILAH MGLGKT QV+ F +T + S NL  
Sbjct: 1039 KPHQVDGVQFMWDCCCESVKKTKSS-HGSGCILAHCMGLGKTLQVVTFFHTVLLSDNLTF 1097

Query: 785  RTALIVTPVNVLHNWKQEFMKWR----PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGV 840
            RTAL+V P+N + NW  EF KW+       +    +  ++++S DR A L  KW  +GGV
Sbjct: 1098 RTALVVCPLNTVLNWVYEFEKWQRNVGSDRVNVGHLVAVKNLS-DRLAAL-QKWYREGGV 1155

Query: 841  FLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQV 899
             ++GY  +R LS      D    +E+   L D GPD +VCDE HM++N  +  ++AL  +
Sbjct: 1156 MVMGYELYRILSLAPKTNDEASRKELKRILVDPGPDFVVCDEGHMLRNNGSRISKALNAI 1215

Query: 900  KCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVK 959
            K +RR+ LTG+PLQNNL+EY+CM +F++   LGS  EFRNRF NPI+NGQ  +STS+DV+
Sbjct: 1216 KTRRRVVLTGTPLQNNLVEYHCMANFIKNNLLGSLREFRNRFINPIQNGQCADSTSKDVR 1275

Query: 960  IMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTN 1019
            +M +R+H+L+  L G VQR D +V+ + LPPK  +V+ V+++PLQ +LY+ +LD      
Sbjct: 1276 LMKKRAHVLHAMLAGCVQRKDYSVLAEFLPPKQEYVLAVRITPLQYKLYRHYLDHITTVG 1335

Query: 1020 DRVSNEKIRK--SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVI 1077
               +N + R   + F  + AL+ IWNHP  LQL  ++   +   +  +S           
Sbjct: 1336 SMTANIRGRTGANLFKDFHALSHIWNHPWCLQLNWERKLHTYITSPVTS----------- 1384

Query: 1078 GEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKS 1137
                     + QG +D+    K W+ +LL E   K +++SGKMVLL  IL + + + +K 
Sbjct: 1385 ---------WKQGASDEN---KGWFRNLLTEADGKIMEHSGKMVLLFKILRLAAELEEKV 1432

Query: 1138 LVFSQSIPTLDLIEFYLSK-----LPRPGKQGKL------WKKGKDWYRLDGRTESSERQ 1186
            LVFSQS+ +LDLIE +L       +P     G        + K  +++R+DG   +  R+
Sbjct: 1433 LVFSQSLFSLDLIETFLQTSHSLAMPSLANVGSFLLSASSFNKNVNYFRIDGSVGAELRK 1492

Query: 1187 KLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
            K ++ FN+  N R    L+ST+AGSLGINL +A+RV+I D SWNP+YD+Q+IYR +R+GQ
Sbjct: 1493 KWMDEFNDAPNSRCNLLLLSTKAGSLGINLVAASRVVIFDASWNPSYDVQSIYRVYRFGQ 1552

Query: 1247 TKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENP 1306
             +PVF YR +A GTMEEKIY RQVTK+ L+ RVVD+QQ+ R  +  E+  L+ F  D   
Sbjct: 1553 VRPVFIYRFLAQGTMEEKIYDRQVTKQSLSNRVVDQQQIERHYTLHELTELYTFTPDLLH 1612

Query: 1307 DPLTAVSKENGQGSSQNTNCALKHKL 1332
            +P       N Q S ++++   K K+
Sbjct: 1613 EP-------NSQKSRRSSSAVPKEKI 1631



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 6/113 (5%)

Query: 493 CTAC----NNVAIE-VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC    N+   + +  HP+L V+VCK C          KD +  +  C WC    +L+
Sbjct: 155 CTACGRQINHFQRDSLFRHPVLKVLVCKACYKYYLSDDISKDGEGMDEQCRWCAEGGNLI 214

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSELGRAM 600
            C  C   FC  C+ RN+    LS+ V AS W C  C+P  L  L +   + +
Sbjct: 215 CCDFCNNAFCKKCILRNLGRKELSN-VVASNWYCYVCNPEPLFGLVTACNKIL 266


>gi|350424823|ref|XP_003493924.1| PREDICTED: hypothetical protein LOC100747229 [Bombus impatiens]
          Length = 1898

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 283/747 (37%), Positives = 420/747 (56%), Gaps = 73/747 (9%)

Query: 609  SSESDSENSDAD----NNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKS 664
            SS SD ENSD D    N+    GK K +K IR+++ D ++  +TK+     KE +ERLK 
Sbjct: 985  SSNSD-ENSDKDLDITNSQGTPGK-KGRKNIRKVMKDKQVTSDTKQAA---KEEEERLK- 1038

Query: 665  LQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL 724
               + + + KL N +  +  L+    ++ L       +++   E  EE V +  ++  +L
Sbjct: 1039 ---RIAERQKLYNEM-YEARLAGEEKVDKL-------VLDFDPETKEELVTVHENLVKRL 1087

Query: 725  KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGL 784
            K HQ  GI+FMW+   +S+ +V S   G GCI+AH MGLGKT QVIA  +T +     G+
Sbjct: 1088 KPHQAEGIKFMWDACFESLERVNSSS-GSGCIIAHCMGLGKTLQVIALGHTLLTHEKTGV 1146

Query: 785  RTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD-RRAELLAKWRAKGGVFLI 843
            +T +IV P++ + NW  EF  W       + ++ +  + ++  R   L  W+  GGV +I
Sbjct: 1147 KTIMIVCPLSTVLNWVNEFTNWLKDIEHDIEIYEMTKLKKNIERKFQLESWQRTGGVLII 1206

Query: 844  GYTAFRNLSFGKHVKDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 902
            GY  FRNLS   +   +N+   +   L   GPD++VCDE H++KN     ++++KQ+K  
Sbjct: 1207 GYEMFRNLSGTNNKMRKNIKEAVLQYLINPGPDVVVCDEGHLLKNEDTALSKSMKQIKTL 1266

Query: 903  RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMN 962
            RRI LTG+PLQNNL+EY+CMV FV+   LG+  EF NRF NPI NGQ  +ST  DV +M 
Sbjct: 1267 RRIVLTGTPLQNNLIEYHCMVQFVKPNLLGTKKEFLNRFGNPITNGQFDDSTEYDVTLMK 1326

Query: 963  QRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRV 1022
            +R+++L++ LKG VQR D +V+   LPPK  +VI V L+ +Q  +Y+ +LD   F   R+
Sbjct: 1327 KRAYVLHKMLKGCVQRFDYSVLTPFLPPKQEYVIFVSLTEMQINMYQHYLD--NFAR-RI 1383

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQLTKDK---------------------------- 1054
             N     S FA +Q+L +IW HP +L++  +K                            
Sbjct: 1384 RN--ANGSLFADFQSLQRIWTHPLVLRMNAEKIEKINEKKFEISDSEGSLKDFIDDAEIE 1441

Query: 1055 ---GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                  + ED +  + D N+  N+    K  N ++      +    +++WW   +    +
Sbjct: 1442 TTTSMSTEEDDDIVTIDTNVTKNIRTNSK-NNRSEAEIIPEEPEKKEEEWWLQFVKLEHF 1500

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK------ 1165
            +++  S K++LL  IL  C  +GDK LVFSQS+ +L LIE +L K+    + G+      
Sbjct: 1501 EDMRVSSKLILLFGILKECEQIGDKVLVFSQSLYSLSLIEQFLEKIDNTTQNGENLEYID 1560

Query: 1166 ----LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                 W  G D++R+DG+T +  R      FNEP N R +  LISTRAG LGINL +ANR
Sbjct: 1561 GHTGSWSLGLDYFRMDGQTSAENRNAWCRIFNEPSNTRARLFLISTRAGGLGINLTAANR 1620

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            VII D SWNP++D+Q+I+R +R+GQ KP + YR +A GTMEEKIY RQVTK  L+ RVVD
Sbjct: 1621 VIIFDASWNPSHDVQSIFRVYRFGQKKPCYVYRFLAAGTMEEKIYNRQVTKLSLSCRVVD 1680

Query: 1282 RQQVHRTISKEEM--LHLFEFGDDENP 1306
             QQ+ R  S + +  L+ FE  + E P
Sbjct: 1681 EQQIERHYSNQNLNELYTFERNNGEKP 1707


>gi|198426669|ref|XP_002129254.1| PREDICTED: ATRX protein [Ciona intestinalis]
          Length = 1900

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 284/752 (37%), Positives = 421/752 (55%), Gaps = 78/752 (10%)

Query: 607  VSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQ 666
            +  S S+  N D+ ++    GK+  ++ IR+ILD+  L + T+    +EK R++RL+  Q
Sbjct: 931  IKDSGSEDSNKDSMDDFHDSGKKMGRRNIRKILDNTNLSKMTQDAEKMEKARRKRLEQDQ 990

Query: 667  VQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKA 726
                    L   V +  D    AS +      T  +++      +  V + S+I   LK 
Sbjct: 991  -------DLEEEVIIIDD---EASPQKKKKVTTHLVLS-----KKPLVEVESAILRALKP 1035

Query: 727  HQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG-LR 785
            HQV GI+F+W N+I+S+ +     +G GCILAH MGLGKT QV+AFL+T + S +L   R
Sbjct: 1036 HQVEGIKFLWRNVIESVARANKS-RGDGCILAHCMGLGKTLQVVAFLHTVLHSPHLPKQR 1094

Query: 786  TALIVTPVNVLHNWKQEFMKW-RPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIG 844
            TAL+V P+  + NW +EF  W RP +       ++++ S   RA +L +W  +GGV + G
Sbjct: 1095 TALVVCPLGTVLNWAREFDMWTRPCKQSMETYSIMDNKSLHDRAIILKRWHKRGGVLVTG 1154

Query: 845  YTAFRNL-SFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQR 903
            Y  F  + +  +    R     I   L  GPDI+VCDE H+IKN   + +  + ++K +R
Sbjct: 1155 YKMFMTMVTITRKQYSRYNKSFIEMMLDPGPDIVVCDEGHIIKNEATNLSNVMSRIKTRR 1214

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            R+ LTG+PLQNNLMEYYCMV+F++   LGS+ EF NRF +PI NGQH +ST  DVK+M +
Sbjct: 1215 RLVLTGTPLQNNLMEYYCMVNFIKPRLLGSAQEFNNRFTHPIRNGQHVDSTERDVKLMKK 1274

Query: 964  RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS 1023
            RSH+L+E L G VQR D+N +++ L PK  +V+ V+L+P+Q RLY+++L    F    V 
Sbjct: 1275 RSHVLHELLAGCVQRKDVNCLREQLMPKHEYVLFVRLTPVQIRLYEQYL--STFQCGDVG 1332

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTK------DKGYPSREDA------EDSSSDENM 1071
            N K     F  ++ L  I  HP  L L K           +RED       ED +S+E++
Sbjct: 1333 NRK--GQLFQDFKNLLLIVCHPKALLLDKIRRENQQNAEEAREDIRSFLNDEDETSEEDL 1390

Query: 1072 -------------------DYNVVIGEKPRNMNDFLQGKN-------------DDGFFQK 1099
                               D   +I  K  ++ D L+ K+              D   ++
Sbjct: 1391 EGEEPPSDDMSKISSMSVQDLKKLILSKGGSLQDCLEKKDLLQRAKDLLTTSATDDPTKE 1450

Query: 1100 DWWNDLLHEHT--YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
             W+  ++      Y  ++ SGK+ LLL IL   + MGDK ++FSQS+ TLDLIE  L  +
Sbjct: 1451 LWFEKVMPSDNLLYDSVEMSGKITLLLSILKSSTMMGDKVVLFSQSLLTLDLIEDILRYV 1510

Query: 1158 PRPGKQGKL---------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTR 1208
               G              W K  D+YR+DG T++  R+ ++++FN   + R +  L+STR
Sbjct: 1511 TMDGSDNTRSPTGVRIMKWYKDVDYYRMDGSTKNERRKTIIDQFNNESDTRCRLMLVSTR 1570

Query: 1209 AGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKR 1268
            AG +GINL  ANR I+ D SWNPT+D+Q+I+R +R+GQTKP + YR +A GTMEEKIY R
Sbjct: 1571 AGGIGINLVGANRAIVFDASWNPTHDVQSIFRIYRFGQTKPCYIYRFIAQGTMEEKIYDR 1630

Query: 1269 QVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            QV K+ LA+RVVD QQ+ R  +  ++  L+ F
Sbjct: 1631 QVVKQSLASRVVDEQQIERHYTANDIAELYTF 1662



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 5/123 (4%)

Query: 487 LSEKFYCTAC-----NNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCG 541
           L +   CT C      +++   + HP+L+V++CK C          KD +  + +C WCG
Sbjct: 55  LDKVIRCTGCGEQILTHLSSNANEHPVLHVLLCKRCYSYYHSGTFQKDENGIDEFCRWCG 114

Query: 542 RSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSELGRAMG 601
              D++ C SC  +FC TC++RN S    ++   +   QC  C  + L+ L  E    + 
Sbjct: 115 DGGDVIMCDSCTNVFCKTCIRRNFSRKKANEIFTSDTVQCFVCDLTPLQSLIQECKEVLE 174

Query: 602 SEN 604
           + N
Sbjct: 175 AFN 177


>gi|148682121|gb|EDL14068.1| alpha thalassemia/mental retardation syndrome X-linked homolog
            (human) [Mus musculus]
          Length = 2429

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 282/688 (40%), Positives = 389/688 (56%), Gaps = 100/688 (14%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
             T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+ K K    G GCIL
Sbjct: 1490 TTKLVLDENEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVEKTKKS-PGSGCIL 1548

Query: 758  AHTMGLGKTFQVIAFL--YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKP 813
            AH MGLGKT QV + L  YTA+                    NW  EF KW+   ++ + 
Sbjct: 1549 AHCMGLGKTLQVFSGLSSYTAL--------------------NWMNEFEKWQEGLNDNEK 1588

Query: 814  LRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
            L V  L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D
Sbjct: 1589 LEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKDIFNKALVD 1648

Query: 873  -GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             GPD +VCDE H++KN  +  ++A+  +K +RRI LTG+PLQNNL+EY+CMV+F++E  L
Sbjct: 1649 PGPDFVVCDEGHILKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLL 1708

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS  EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK
Sbjct: 1709 GSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPK 1768

Query: 992  TVFVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQ 1049
              +V+ V+++ +Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQ
Sbjct: 1769 HEYVLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKLFQDFQMLSRIWTHPWCLQ 1828

Query: 1050 L----TKDKGY------------PSREDAEDSSSDE------------------NMDYNV 1075
            L     ++KGY             S E ++  SSDE                    D +V
Sbjct: 1829 LDYISKENKGYFDEDSMDEFIASDSDETSKSLSSDEKKKPKGKKGKKDSSSSGSGSDNDV 1888

Query: 1076 VI---------GEKPRNMNDFLQGKNDDGFFQKD----------------WWNDLLHEHT 1110
             +         G    NM+D   G N     + D                W+ D + +  
Sbjct: 1889 EVIKVWNSRSRGGGDGNMDD--TGNNPSVSLKLDESKTTSTSNPSSPAPDWYKDFVTDTD 1946

Query: 1111 YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK----- 1165
             + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R   + K     
Sbjct: 1947 AEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKEKPLI 2006

Query: 1166 -----LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
                  W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+AGSLGINL +AN
Sbjct: 2007 YKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAAN 2066

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            RVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQVTK+ L+ RVV
Sbjct: 2067 RVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVV 2126

Query: 1281 DRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            D+QQV R  +  E+  L+ F  D   DP
Sbjct: 2127 DQQQVERHFTMNELTELYTFEPDLLDDP 2154



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICQPEPL 272


>gi|147766533|emb|CAN69686.1| hypothetical protein VITISV_026772 [Vitis vinifera]
          Length = 346

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/334 (73%), Positives = 271/334 (81%), Gaps = 40/334 (11%)

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
            MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN
Sbjct: 1    MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 60

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            PIENGQH NSTS+DVKIMNQRSHILYEQLKGFVQRMDM+VVK DLPPKTVFV+ VKLS L
Sbjct: 61   PIENGQHMNSTSDDVKIMNQRSHILYEQLKGFVQRMDMSVVKNDLPPKTVFVMAVKLSSL 120

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQLTK-DKGYPSRED 1061
            QR+LYKRFLD+HGFTND+VS++KIRK  FFAGYQALAQIWNHPGILQLTK +K Y  RED
Sbjct: 121  QRKLYKRFLDVHGFTNDKVSSDKIRKRCFFAGYQALAQIWNHPGILQLTKEEKDYARRED 180

Query: 1062 ------AEDSSSDENMDYNVVIG--------------------------------EKPRN 1083
                  A+DSSSD+N+DYN V+G                                EK RN
Sbjct: 181  GVENFLADDSSSDDNIDYNTVLGGLSRSNGSFMLVASCGLELVRLGNRYVFMLLAEKVRN 240

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 1143
             N+  QGK D G +QK WWNDLLHE+ YKE+DYSGKMVLLLDILTMC+++GDK+LVFSQS
Sbjct: 241  KNEIQQGKVDSGLYQKGWWNDLLHENNYKEVDYSGKMVLLLDILTMCADVGDKALVFSQS 300

Query: 1144 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            + TLDLIE+YLSKL R GK+GK WK+GKDWYR +
Sbjct: 301  LSTLDLIEYYLSKLSRQGKKGKCWKQGKDWYRFN 334


>gi|307176622|gb|EFN66090.1| Transcriptional regulator ATRX [Camponotus floridanus]
          Length = 2405

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 267/710 (37%), Positives = 409/710 (57%), Gaps = 46/710 (6%)

Query: 609  SSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQ 668
            +S+SDS  ++  N+      +  +K IR++L D ++ ++TK     E+ER +R+   Q  
Sbjct: 1455 ASDSDSSIAEIKNSQDSTPGKSGRKNIRKVLKDKQVADDTKLAAKEEEERLKRIAERQAL 1514

Query: 669  FSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQ 728
            ++     M  + L G+           + +   +++   E  +E V +   +  +LK HQ
Sbjct: 1515 YNE----MYEMRLAGE-----------EKVEKLVLDFDTETKKELVSVHEELVKRLKPHQ 1559

Query: 729  VVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTAL 788
              GI+FMW+   +S+ +VK+   G GCI+AH MGLGKT QVIA  +T +     G++T L
Sbjct: 1560 AQGIKFMWDACFESLERVKTT-SGSGCIIAHCMGLGKTLQVIALTHTLLSHEETGVKTVL 1618

Query: 789  IVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD-RRAELLAKWRAKGGVFLIGYTA 847
            IV P++ + NW  E+  W  +++  + V+ L    ++  R   L +W+  GGV +IGY  
Sbjct: 1619 IVCPLSTVLNWLNEYRTWL-NDMDDIEVYELTKFKKNFERKYQLQRWQKTGGVMIIGYEM 1677

Query: 848  FRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIA 906
            FRNL+       +NM + I   L D G D++VCDE H++KN     ++ +++VK  RRI 
Sbjct: 1678 FRNLTGANKNIRKNMKQVIDECLVDPGADLIVCDEGHLLKNEDTALSKCMRRVKTLRRIV 1737

Query: 907  LTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSH 966
            LTG+PLQNNL+EY+CMV FV+   LG+  EF NRF NPI NGQ  +ST+ DVK+M +R+H
Sbjct: 1738 LTGTPLQNNLIEYHCMVQFVKPNLLGTKKEFLNRFVNPITNGQFDDSTAYDVKLMKKRAH 1797

Query: 967  ILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEK 1026
            +L++ L+G VQR D +V+   LPPK  +VI V+L+  Q ++Y+ +L+       R S   
Sbjct: 1798 VLHKMLEGSVQRFDYSVLTPFLPPKQEYVIFVRLTDTQIKMYQYYLENLA----RRSTTG 1853

Query: 1027 IRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSD--ENMDYNVVIGEKPRNM 1084
               + FA +QAL +IW HP +L+L  +K   + E  + +  D  EN+        K R  
Sbjct: 1854 AGGTLFADFQALQRIWTHPIVLRLNAEKIEKANEKKDLTIDDPKENI-------SKRRTR 1906

Query: 1085 ND----FLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVF 1140
            N+      + +  +   + +WW+  +    ++++  S K++L   IL     +GDK L+F
Sbjct: 1907 NNPGEEEPEEEAKEETREAEWWSQFVQPEHFEDMRVSAKLLLFFGILKESEQIGDKVLLF 1966

Query: 1141 SQSIPTLDLIEFYLSKLPRPGKQGKL----------WKKGKDWYRLDGRTESSERQKLVE 1190
            SQS+ +L LIE +L K+    +              W  G D++RLDG+T +  R    +
Sbjct: 1967 SQSLYSLTLIEEFLRKIDDETQNNACVDTLDNHTGSWSLGLDYFRLDGQTSAENRNIWCK 2026

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
             FN+P N R +  LISTRAG LGINL +ANRVII D SWNP++D+Q+I+R +R+GQ KP 
Sbjct: 2027 IFNKPTNTRARLFLISTRAGGLGINLTAANRVIIFDASWNPSHDVQSIFRIYRFGQKKPC 2086

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            + YR +A GTMEEKIY RQVTK  L+ RVVD QQ+ R  S   +  L+ F
Sbjct: 2087 YIYRFLAAGTMEEKIYNRQVTKLSLSCRVVDEQQIERHYSNHNLNELYTF 2136



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 11/103 (10%)

Query: 493 CTACNN-VAIE---VHPHPILNVIVCKDCKCL---LEKKMHVKDADCSECYCVWCGRSSD 545
           CT+C N +++E   +  HP++ ++ C+ C      ++     +D D  + YC  CG    
Sbjct: 34  CTSCGNELSLESKQIFSHPLMGILQCETCWNHFKEIDAAFEDEDEDEFQKYCYICGDDKK 93

Query: 546 LVSC--KSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSP 586
           L  C  K C + FC  C+KRN + + L  E +   W+C  C+P
Sbjct: 94  LYECGNKDCVSAFCKKCIKRNATMSLLHAEKKD--WKCFTCNP 134


>gi|307203054|gb|EFN82245.1| Transcriptional regulator ATRX-like protein [Harpegnathos saltator]
          Length = 2019

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 280/772 (36%), Positives = 414/772 (53%), Gaps = 105/772 (13%)

Query: 612  SDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSS 671
            SDS++SD     +    +  +K IR++L D ++ E+TK+    E+ER +R+   Q  ++ 
Sbjct: 1101 SDSDSSDTIQTSQGTPGKSGRKNIRKVLKDKQVAEDTKQAAKEEEERLKRIAERQALYNE 1160

Query: 672  KSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVG 731
                M  + L G+           + I   +++   E  EE V +   +  +LK HQ  G
Sbjct: 1161 ----MYEMRLAGE-----------EKIDKLVLDFDTETKEELVSVHEDLVKRLKPHQAQG 1205

Query: 732  IRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVT 791
            I+FMW+   +S+ ++KS   G GCI+AH MGLGKT QV+A  +T +      ++T LIV 
Sbjct: 1206 IKFMWDACFESLERIKST-SGSGCIIAHCMGLGKTLQVVALTHTLLNHETTDIKTVLIVC 1264

Query: 792  PVNVLHNWKQEFMKWRPSELKPLRVFMLEDV-SRDRRAEL-------------------L 831
            P++ + NW  E+  W       + V+ L    SR   AE                    L
Sbjct: 1265 PLSTVLNWANEYKIWLADMDDDVNVYELTKTWSRKFVAEQSIRYNGGSRFKRNFERKCQL 1324

Query: 832  AKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRA 890
             +W+  GGV +IGY  FRNL+       + M   +   L D GPD++VCDE H++KN   
Sbjct: 1325 QRWQKTGGVLIIGYEMFRNLTGSNKNIRKGMKEALLECLIDPGPDLIVCDEGHLLKNEDT 1384

Query: 891  DTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH 950
              ++ +++V+  RRI LTG+PLQNNL+EY+CMV FV+   LG+  EF NRF NPI NGQ 
Sbjct: 1385 ALSKCIRKVRTMRRIVLTGTPLQNNLIEYHCMVQFVKPNLLGTKKEFLNRFVNPITNGQF 1444

Query: 951  TNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKR 1010
             +ST+ DVK+M +R+H+L++ L+G VQR D +V+   LPPK  +VI V+L+  Q ++Y+ 
Sbjct: 1445 DDSTAYDVKLMKKRAHVLHKMLEGSVQRFDYSVLTPFLPPKQEYVIFVRLTETQIKMYQY 1504

Query: 1011 FLD-----LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK--------GYP 1057
            +LD      HG             S FA +QAL ++W HP +L+L  +K        G+ 
Sbjct: 1505 YLDNLARRHHGTGG----------SLFADFQALQRVWTHPIVLRLNAEKIEKANEKKGFS 1554

Query: 1058 SREDAEDS--------------------------SSDENMDYNVVIGEKPRNMNDFLQGK 1091
            S  D E S                          + DE  D   +   K RN     + +
Sbjct: 1555 S--DTEGSLKDFINDDSTESESSSSESSNDSDIQTIDETKDNTNIPRRKTRNNPGVEEPE 1612

Query: 1092 NDDGFFQK-----DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPT 1146
             ++   ++     +WW+  +    ++++  S K++LL  IL  C  +GDK LVFSQS+ +
Sbjct: 1613 PEEPSPKEGEETVEWWSQFVQPEHFEDMKVSAKLLLLFGILKECEQIGDKVLVFSQSLYS 1672

Query: 1147 LDLIEFYLSKLPRPGKQGKL----------WKKGKDWYRLDGRTESSERQKLVERFNEPL 1196
            L LIE +L ++    +  K           W  G D++RLDG+T +  R      FN+P 
Sbjct: 1673 LTLIEEFLRRIDDETQNNKHLESLDNHTGNWSLGLDYFRLDGQTSADNRSAWCRIFNKPT 1732

Query: 1197 NKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLM 1256
            N R +  LISTRAG LGINL +ANRVII D SWNP++D+Q+I+R +R+GQ KP + YR +
Sbjct: 1733 NTRARLFLISTRAGGLGINLTAANRVIIFDASWNPSHDVQSIFRIYRFGQKKPCYVYRFL 1792

Query: 1257 AHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM--LHLFEFGDDENP 1306
            A  TMEEKIY RQVTK  L+ RVVD QQ+ R  S + +  L+ FE  D E P
Sbjct: 1793 AAKTMEEKIYNRQVTKLSLSCRVVDEQQIERHYSNQNLNELYKFEAYDTERP 1844


>gi|70568940|dbj|BAE06321.1| ATRX protein [Ciona intestinalis]
          Length = 1086

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 281/752 (37%), Positives = 421/752 (55%), Gaps = 78/752 (10%)

Query: 607  VSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQ 666
            +  S S+  N D+ ++    GK+  ++ IR+ILD+  L + T+    +EK R++RL+  Q
Sbjct: 117  IKDSGSEDSNKDSMDDFHDSGKKMGRRNIRKILDNTNLSKMTQDAEKMEKARRKRLEQDQ 176

Query: 667  VQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKA 726
                    L   V +  D ++          +T ++V       +  V + S+I   LK 
Sbjct: 177  -------DLEEEVIIIDDEASPQK----KKKVTTHLV----LSKKPLVEVESAILRALKP 221

Query: 727  HQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG-LR 785
            HQV GI+F+W N+I+S+ +     +G GCILAH MGLGKT QV+AFL+T + S +L   R
Sbjct: 222  HQVEGIKFLWRNVIESVARANKS-RGDGCILAHCMGLGKTLQVVAFLHTVLHSSHLPKQR 280

Query: 786  TALIVTPVNVLHNWKQEFMKW-RPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIG 844
            TAL+V P+  + NW +EF  W RP +       ++++ S   RA +L +W  +GGV + G
Sbjct: 281  TALVVCPLGTVLNWAREFDMWTRPCKQSMDTYSIMDNKSLHDRAIILKRWHKRGGVLVTG 340

Query: 845  YTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQR 903
            Y  F  +      +     +     + D GPDI+VCDE H+IKN   + +  + ++K +R
Sbjct: 341  YKMFMTMVTNTRKQYSRYNKSFIEMMLDPGPDIVVCDEGHIIKNEATNLSNVMSRIKTRR 400

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            R+ LTG+PLQNNLMEYYCMV+F++   LGS+ EF NRF +PI NGQH +ST  DVK+M +
Sbjct: 401  RLVLTGTPLQNNLMEYYCMVNFIKPRLLGSAQEFNNRFTHPIRNGQHVDSTERDVKLMKK 460

Query: 964  RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS 1023
            RSH+L+E L G VQR D+N +++ L PK  +V+ V+L+P+Q RLY+++L    F    V 
Sbjct: 461  RSHVLHELLAGCVQRKDVNCLREQLMPKHEYVLFVRLTPVQIRLYEQYLS--TFQCGDVG 518

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDK------GYPSREDA------EDSSSDENM 1071
            N K     F  ++ L  I  HP  L L K +         +RED       ED +S+E++
Sbjct: 519  NRK--GQLFQDFKNLLLIVCHPKALLLDKIRRENQQNAEEAREDIRSFLNDEDETSEEDL 576

Query: 1072 -------------------DYNVVIGEKPRNMNDFLQGKN-------------DDGFFQK 1099
                               D   +I  K  ++ D L+ K+              D   ++
Sbjct: 577  EGEEPPSDDMSKISSMSVQDLKKLILSKGGSLQDCLEKKDLLQRAKDLLTTSATDDPTKE 636

Query: 1100 DWWNDLLHEHT--YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
             W+  ++      Y  ++ SGK+ LLL IL   + MGDK ++FSQS+ TLDLIE  L  +
Sbjct: 637  LWFEKVMPSDNLLYDSVEMSGKITLLLSILKSSTMMGDKVVLFSQSLLTLDLIEDILRYV 696

Query: 1158 PRPGKQGKL---------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTR 1208
               G              W K  D+YR+DG T++  R+ ++++FN   + R +  L+STR
Sbjct: 697  TMDGSDNTRSPTGVRIMKWYKDVDYYRMDGSTKNERRKTIIDQFNNESDTRCRLMLVSTR 756

Query: 1209 AGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKR 1268
            AG +GINL  ANR I+ D SWNPT+D+Q+I+R +R+GQTKP + YR +A GTMEEKIY R
Sbjct: 757  AGGIGINLVGANRAIVFDASWNPTHDVQSIFRIYRFGQTKPCYIYRFIAQGTMEEKIYDR 816

Query: 1269 QVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            QV K+ LA+RVVD QQ+ R  +  ++  L+ F
Sbjct: 817  QVVKQSLASRVVDEQQIERHYTANDIAELYTF 848


>gi|358255307|dbj|GAA57019.1| transcriptional regulator ATRX [Clonorchis sinensis]
          Length = 2392

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 284/752 (37%), Positives = 415/752 (55%), Gaps = 96/752 (12%)

Query: 628  KRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSA 687
            +RK +KKIR+I   + L + TK   A E+ER+ R+   Q  ++           D  +  
Sbjct: 1432 ERKGRKKIRKIYTKSHLSQSTKTAEAEERERRRRIGDRQKTYN-----------DWVIQE 1480

Query: 688  GASIEVLGDA-ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSI-RK 745
            G  I+V+    I     +         +R+ S I   LK HQV  +RF+W+ +I+S+ R+
Sbjct: 1481 GEGIDVVTKKLILEKPTDESSSSSATVIRVHSDILKHLKPHQVEAVRFLWDCVIESVERQ 1540

Query: 746  VKS-GDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVN-LGLRTALIVTPVNVLHNWKQEF 803
             KS  D   G ILAH MGLGK+  +IAF++T    V+ L L++ LI+ PVN L NWK E+
Sbjct: 1541 QKSPNDYSGGAILAHCMGLGKSLSIIAFIHTLFSYVDVLNLKSCLIICPVNTLLNWKHEW 1600

Query: 804  MKWRPSELKPLRVFMLED-VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNM 862
              W P E +P+ +F L     +  R ++L  W  KGGV LIGY  FRN   G+       
Sbjct: 1601 EHWLPEE-EPIDIFELASKPDKKLRVDVLKHWFRKGGVLLIGYDMFRNFVNGRKATRSKA 1659

Query: 863  ARE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
             RE +  AL D GPDI++CDE HM+KN ++  ++A+ Q++  +R+ LTG+PLQNNL EY+
Sbjct: 1660 NREAVKQALVDPGPDIVICDEGHMLKNDKSGLSKAVSQIRTLKRVVLTGTPLQNNLNEYH 1719

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
             MV+FV+   LG++ EF NRF NPI NGQH+NST  DVK+M +R+H+LY+ L G VQR D
Sbjct: 1720 AMVNFVKPNLLGTAREFNNRFGNPIRNGQHSNSTERDVKLMKRRAHVLYKMLDGCVQRKD 1779

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG---FTNDRVSNEKIRKSFFAGYQA 1037
             N + K LPP+  +V+  +LS  QR LY+ +L +       N     E+ R++ F   Q 
Sbjct: 1780 YNALTKYLPPRYEYVVMCRLSEAQRELYQTYLRVRADRLPLNTNYRGEETRQTLFRDQQT 1839

Query: 1038 LAQIWNHPGILQLTKDKGYPSRE------------DAEDSS------------------- 1066
            L ++W HP +L     + + +RE            DA D++                   
Sbjct: 1840 LYRVWTHPFLL-----RSHETREAQDNDEESTDLTDASDTTEETINSGSSCSDTDFRSGK 1894

Query: 1067 ----------------SDEN---MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
                            S++N    D NV+  +   +  D  Q   DD   +  WW     
Sbjct: 1895 LKTDEISATTHKRRTRSNKNNSEADDNVICLD---SSEDTQQALGDDVNSKDPWWYKPYK 1951

Query: 1108 EHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL---------P 1158
            +     L+  GK+ +L  IL  C+++GDK +VF+QS+ +LDL+E +L ++         P
Sbjct: 1952 DEYDWCLEVGGKLEVLFHILKKCTDIGDKVIVFTQSLLSLDLLERFLGEIHRQPDGESTP 2011

Query: 1159 RPGKQGKL-------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGS 1211
            RP             W +G D+ R+DG   +  R+ L  RFN   N R++  LISTRAG 
Sbjct: 2012 RPDLSRYFSDVNVNTWVRGHDYERMDGSMNAVVRKNLQHRFNRVSNTRLRLFLISTRAGG 2071

Query: 1212 LGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVT 1271
            LGINL +ANR+I+ D  WNP++D+Q+I+R +R+GQTKPV+ YRL+A GTMEEKIY RQVT
Sbjct: 2072 LGINLTAANRLILFDACWNPSHDIQSIFRCYRFGQTKPVYIYRLIAQGTMEEKIYDRQVT 2131

Query: 1272 KEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            K+ L+ RV+D QQ+ R  +  ++L L+ F  D
Sbjct: 2132 KQSLSLRVIDEQQIDRHFTMADLLALYSFDPD 2163



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 9/141 (6%)

Query: 493 CTACNNV-AIEVHP---HPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVS 548
           CTAC  V  I   P   HP+L VI CK C     ++   +D   ++  C WCG   DL+ 
Sbjct: 469 CTACATVLQIAFMPLKVHPVLRVITCKRCAKFYARQSFKQDGAGNDENCRWCGDGGDLIC 528

Query: 549 CKSCKTLFCTTCVKRNISEACLSDEVQA----SCWQCCCCSPSLLKRLTSELGRAMGSEN 604
           C +C   FC  C+KRN+  + LSD ++A      W+C  C PS ++RL ++    M    
Sbjct: 529 CDTCSNAFCKRCIKRNLGRSALSD-LEALGDDDVWKCVVCDPSPIRRLQNQCSEVMKEVK 587

Query: 605 LIVSSSESDSENSDADNNLKI 625
              +     +E    DN L++
Sbjct: 588 EFRAFQRLRNEKRQEDNRLRV 608


>gi|427791029|gb|JAA60966.1| Putative transcriptional regulator atrx, partial [Rhipicephalus
            pulchellus]
          Length = 1183

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 289/768 (37%), Positives = 413/768 (53%), Gaps = 106/768 (13%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K ++ IR+++ D +L +ETK     E+ER++R+       + + KL N     G   A  
Sbjct: 193  KGRRNIRKLISDKKLTQETKAAALAEEERKKRI-------AERQKLYNEALGTGPTEADT 245

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
             ++ L       ++ V  +  +  V +  ++   +K HQV G++FM++ +I+S+  +K  
Sbjct: 246  KVKQL-------VLEVDLKTKKPLVEVDEALVKSMKPHQVKGVKFMYDCVIESLEMLKKD 298

Query: 750  -DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALIVTPVNVLHNWKQEFMKW 806
              KG GCILAH MGLGKTFQVI+FL+T M     G  LRTAL+V P N + NW  EF +W
Sbjct: 299  PTKGSGCILAHCMGLGKTFQVISFLHTVMTHKVSGPLLRTALVVCPYNTVLNWANEFEQW 358

Query: 807  RPSELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNL--SFGKHVKDRNMA 863
                   L+++    +  +  R E+L +W+ KGGV ++GY  FR L  + GK  K +   
Sbjct: 359  LDGNDLGLKIYETSAIKVNSVRLEVLERWQRKGGVAIVGYDMFRRLVNTRGKGKKLQEGF 418

Query: 864  REICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMV 923
            R +   L  GP ++VCDE H++KN     ++A+ ++K  RRI LTG+PLQNNL EY+CMV
Sbjct: 419  RRVL--LDPGPSVVVCDEGHVLKNDNTGLSKAMSELKTGRRIVLTGTPLQNNLQEYHCMV 476

Query: 924  DFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV 983
             FV+ G LG+  EF NRF NPI NG   +ST +DVK+M +R HIL+  L G VQR D + 
Sbjct: 477  SFVKPGLLGTKREFLNRFVNPIANGACADSTVQDVKLMKKRVHILHRLLDGCVQRCDYSA 536

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
            +   LPPK  +VI+V+LS +Q  LYK FL+       R        S F  +  L  IW 
Sbjct: 537  LAPFLPPKCEYVISVRLSEVQVALYKHFLE--HLARGRQKQPGAGTSLFWDFNMLRNIWT 594

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSD----------------ENMDYNVVI------GEKP 1081
            HP +L+L+ ++    +E  +D  SD                E+ D + VI      G K 
Sbjct: 595  HPMLLELSAER-LAKKELLKDDESDMASFIDDGSVSEKSSSESNDNDAVICLDDDEGPKT 653

Query: 1082 RNMNDFLQ----------GKNDDGFFQKD-----------------------------WW 1102
            R+     Q          GKND G    D                             WW
Sbjct: 654  RSQRRARQKDNSDKDEKDGKNDKGDGSSDDEVISTWQTRSRGNPDEMPPTPPKPEKKEWW 713

Query: 1103 NDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL-------- 1154
            +  + E   ++L  SGKM LL +IL  C  +GDK L+FSQS+ TLD++E  L        
Sbjct: 714  DQYISEEDMEKLQISGKMSLLYNILQECDAIGDKVLLFSQSLLTLDMVERLLEHCDERAA 773

Query: 1155 -----SKLPRPGKQGK----LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
                 + L  P    +     W +G D++R+DG T    R + +E FN+  N R +  LI
Sbjct: 774  AVDPETALVDPTDPLRDCHNTWVRGIDYFRMDGSTSVDLRARWIEMFNDEDNPRGRLFLI 833

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            ST+AGSLG NL  ANRV+++D SWNPT+D+QAI+R +R+GQ KPVF YR++A GTMEEKI
Sbjct: 834  STKAGSLGTNLVGANRVVLMDASWNPTHDIQAIFRVYRFGQKKPVFIYRMLAQGTMEEKI 893

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN---PDPLT 1310
            Y RQV K+ L+ RVVD QQ+ R  +  ++  L+ F  D     P P+ 
Sbjct: 894  YDRQVNKQSLSCRVVDEQQIERHFNAADLQELYSFTPDSKSNRPTPMV 941


>gi|313231397|emb|CBY08512.1| unnamed protein product [Oikopleura dioica]
          Length = 1201

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/671 (38%), Positives = 383/671 (57%), Gaps = 80/671 (11%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   I+ +LK HQ  G++FM+ N+++ + +  S + G GCILAH MGLGKT Q ++FL
Sbjct: 245  VCVDGRIARRLKEHQNGGVKFMYANMVERVDRANSSE-GQGCILAHCMGLGKTIQTLSFL 303

Query: 774  YTAMRSVNLGL-RTALIVTPVNVLHNWKQEFMKWRPSELKP-LRVFMLEDVSRDR-RAEL 830
               M S +L + R  LI+ P+N LHNW +E  +W     +P L  + L D    + R + 
Sbjct: 304  QAVMCSKDLDMCRKVLILCPMNTLHNWLRELHEWLDELERPELACYSLNDSPTPKERVQE 363

Query: 831  LAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTR 889
            L +W   GG+ ++GY  +R L+ G   +     +     L D GPDI++CDE H++KN+ 
Sbjct: 364  LQRWHENGGIMVMGYDMYRMLATGSRTRVPKYKKAQKATLLDPGPDIIICDEGHLLKNSE 423

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
            A   + L +++ +RR  LTG+P+QNNL+EY+CM  FV+   LG+  EFRNRF NPI NGQ
Sbjct: 424  AAIAKVLSKIRTKRRCVLTGTPVQNNLIEYHCMASFVKPNLLGTLKEFRNRFVNPILNGQ 483

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
            H +STS DV IM +R+H+L+  L G VQR D +V+ K LP K  ++I+V+L+  Q+ LYK
Sbjct: 484  HADSTSYDVTIMKRRAHVLHNLLSGCVQRKDYHVLAKHLPEKYEYIISVRLTSFQQELYK 543

Query: 1010 RFLDLHGFTNDRVSNEKIR--KSFFAGYQALAQIWNHPGILQL----------------- 1050
             +LD      +++ N+  R     FA YQ L ++W HP +L+                  
Sbjct: 544  FYLDNVSNKGEKIENQNGRGVSGLFADYQNLMRVWTHPKLLETHSLKREFADLFVEHEEA 603

Query: 1051 ------------TKDKGYPSREDAEDS--SSDENMDYNVVIGE----------------- 1079
                        ++D+     ED +    S+DE+       GE                 
Sbjct: 604  ESDLEELAKNINSEDEQIAILEDGDPGLDSTDEDGSDKFNFGEDAPLYEPEEPVKKLSRS 663

Query: 1080 ---KPRNMNDFLQGKNDD---GFFQK---------DWWNDLLHEHTYKELDYSGKMVLLL 1124
               K RN +D L+G  +D   G FQ          +WW  L  +     L +S K+ +LL
Sbjct: 664  ERRKKRN-DDKLRGAEEDEDIGEFQTLESAQRSKLEWWGKLSKDVDLNGLHHSSKIQVLL 722

Query: 1125 DILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--------LPRPGKQGKLWKKGKDWYRL 1176
            +++ +C   G+K LVFSQS+ +LDLIE +L +        LP P   GK W K +D++R+
Sbjct: 723  ELMRVCELRGEKLLVFSQSLMSLDLIEEFLDQCTALVDQGLPSPAGSGK-WIKNEDYFRM 781

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG T   +R + +  FN+PLN R +  +IST+AG LG+NL +A RV+I D SWNPT+D+Q
Sbjct: 782  DGATSGGKRHEFIGAFNDPLNMRSRLFIISTKAGCLGVNLVAATRVVIFDASWNPTHDIQ 841

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            +I+R +R GQTKPVF YRL+A GTMEEK+Y+RQV K+GLA RV+D QQV R  S  ++  
Sbjct: 842  SIFRVYRIGQTKPVFIYRLVAQGTMEEKVYRRQVQKQGLAQRVLDEQQVGRFFSSGDLKE 901

Query: 1297 LFEFGDDENPD 1307
            L+ F  +  P+
Sbjct: 902  LYMFECESTPE 912


>gi|321468268|gb|EFX79254.1| hypothetical protein DAPPUDRAFT_188325 [Daphnia pulex]
          Length = 1009

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 271/769 (35%), Positives = 426/769 (55%), Gaps = 84/769 (10%)

Query: 608  SSSESDSENSDADNNLKI--------GGKRKQKKKIRRILDDAELGEETKRKIAIEKERQ 659
            ++  SDSENS+ D+++++         G  K +K I++I+ D  L +ETK     E++R+
Sbjct: 180  AAHTSDSENSN-DSDIEVLNESQRSEAGGSKGRKNIKKIMKDTNLKDETKAAAKEEEDRK 238

Query: 660  ERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIV-NVVREKGEEAVRIPS 718
             R+       + + +  N   + GD++       L +A T ++V +   +  EE V +  
Sbjct: 239  RRI-------AERQRFYNEAFV-GDMA-------LINAQTHHLVLDFDPKTKEELVTVDK 283

Query: 719  SISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR 778
             I  KLK HQV G++FMW+   +SI ++K    G GCILAH MGLGK+ QV+  ++T + 
Sbjct: 284  HIVTKLKPHQVKGVKFMWDACFESIERLKE-HPGSGCILAHCMGLGKSLQVVTLVHTVLT 342

Query: 779  SVNLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPLRVFMLEDVSRDRRAELLAKWRA 836
            +    +   L+V P++ + NW  EF  W P  S+++   +   +  S+D R   L  W  
Sbjct: 343  NKACKVDRVLVVCPLSTVLNWVNEFNVWLPPNSDVEVYEMASAKGNSKDIRKYTLQSWLE 402

Query: 837  KGGVFLIGYTAFRNLSFGKHVKDRNMAREI-CHALQD-GPDILVCDEAHMIKNTRADTTQ 894
             GGV +IGY  +RNL+   + K     R++   +L D GP ++VCDE H++KN +   ++
Sbjct: 403  GGGVMIIGYDMYRNLTNENNKKITKKERDVFTRSLVDPGPQLVVCDEGHLLKNEKTALSK 462

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            A+ ++  ++R+ LTG+PLQN+L+EY+CM+ FV+   LG+  EF NRF NPI+NGQ  +ST
Sbjct: 463  AMNKIATRKRVVLTGTPLQNSLLEYHCMIQFVKPNLLGTVREFTNRFANPIKNGQAADST 522

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
              DV++M +R+H+L++ L+  VQR D  V+   LPPK  +V++VKLS LQ ++Y+ +L+ 
Sbjct: 523  DSDVRVMKRRAHVLHKMLEDSVQRFDYAVLTPFLPPKHEYVVSVKLSELQIKMYQYYLEY 582

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT----KDKGYPSREDAEDSSSD-- 1068
            H                FA +Q L ++W HP  L L     + K   +  D+E S +D  
Sbjct: 583  HAKGGPNHIGRGKGAGLFADFQELGRVWTHPKALLLAELNREAKAKNNSSDSEGSIADFI 642

Query: 1069 --------ENMDYNVVIGEKPRNMNDFLQGKNDDGF-----------------------F 1097
                     + D  VV  ++  +  +   G   + F                        
Sbjct: 643  DDRGETPVSDDDGGVVCLDESGDEKEAAAGTKSNNFRMRTRAARGDQPPPEEELGVTTPM 702

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
               WW+  + +    ++++SGK++LL+DIL  C  +GDK LVFSQS+ +L+LIE +L+  
Sbjct: 703  SSTWWSQFVQDEDMVKMEHSGKLILLMDILRQCELIGDKVLVFSQSLVSLNLIEEFLAAE 762

Query: 1158 PRPGKQGK--------------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1203
                ++ +               W+   D++RLDG+T +  R+     FN P N R +  
Sbjct: 763  DEQNEKNRASLASTDLKQDPIGTWRFNHDYFRLDGQTSAELRKNACNAFNNPSNLRSRLF 822

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            LIST+AG LGINL +ANRVII D SWNP++D+Q+I+R +R+GQ KP + YR +A GTMEE
Sbjct: 823  LISTKAGGLGINLVAANRVIIFDASWNPSHDVQSIFRVYRFGQKKPCYIYRFLAQGTMEE 882

Query: 1264 KIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN---PDPL 1309
            KIY RQVTK  L+ RVVD QQ+ R  +  ++  L+ F  D +   P PL
Sbjct: 883  KIYDRQVTKLSLSCRVVDEQQIERHFNSADLNELYIFEPDSHLRRPTPL 931


>gi|270010403|gb|EFA06851.1| hypothetical protein TcasGA2_TC009794 [Tribolium castaneum]
          Length = 1540

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 267/737 (36%), Positives = 413/737 (56%), Gaps = 77/737 (10%)

Query: 632  KKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASI 691
            +K+IR I     L E TK+  A E+ER+ R+   Q +++   +  +              
Sbjct: 640  RKQIRNIWGRDSLAESTKQAEAEERERKARIAEKQKKYNQIYEFSSQ------------- 686

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK 751
              L   +   +++   +  +E +++  S+ +KLK HQ  G++FMW+   +S+ + KS  K
Sbjct: 687  --LNAKVDKVVLDFDEKNQKELLKVDDSLVSKLKPHQASGVQFMWDACFESLERAKST-K 743

Query: 752  GLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE 810
            G GCILAH MGLGKT QVI   +T +  S    ++  L+V+P+N + NW  EF +W P +
Sbjct: 744  GSGCILAHCMGLGKTLQVITLSHTLLINSEKTNVKKVLVVSPLNTVLNWVSEFKQWLP-D 802

Query: 811  LKPLRVFMLEDVSRDRRAELLAK-WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA 869
             +   V+ L    ++   +   K W   GGV +IGY  FRNLS   +  ++ +++++  A
Sbjct: 803  CEEYDVYELVSFKQNYERQYQVKTWHDHGGVLIIGYDMFRNLS---NPDNKRLSKKMRAA 859

Query: 870  LQD-----GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
             Q+     GPD+++CDE H++KN + +T+ A+ ++K  RRI LTG+PLQNNL EY+CMV 
Sbjct: 860  FQEALVDPGPDLVICDEGHLLKNEKTNTSIAMNRLKTLRRIVLTGTPLQNNLKEYFCMVQ 919

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            FV+   LG+  E+ NRF NPI NGQ+T+ST  D++IM +RSH+L++ L G VQR D +V+
Sbjct: 920  FVKPNLLGTYKEYLNRFVNPITNGQYTDSTPHDIQIMRKRSHVLHKMLDGVVQRRDYSVL 979

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-FAGYQALAQIWN 1043
            +  LPPK  +V+ + L+  Q +LY+ ++D    + D  +    R SF F  +QAL +I  
Sbjct: 980  EPYLPPKHEYVLFLSLTETQIKLYQHYMDRFARSGDGSN----RTSFLFVDFQALQRICT 1035

Query: 1044 HPGIL-------QLTKDKGYPSREDAEDSSSDENMDYNVVI-------------GEK--- 1080
            HP +L       +L K+K     E++E S  D   D +                GEK   
Sbjct: 1036 HPRVLLDKSIEMKLAKEKRDDESEESEGSLKDFINDDDEEEESTGSSNSSSDEGGEKKSA 1095

Query: 1081 -PRN----MNDFLQGKND--------DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
             PR         L  +N         +   +K+WW +         + +S K+ LL +IL
Sbjct: 1096 APRKRVTRAAAALAKENGEPEEIITLEDTVEKEWWQEYCDGDELNNIAHSSKLFLLFEIL 1155

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL---------WKKGKDWYRLDG 1178
              C  +GDK LVFSQS+ +L++IE++L ++    + G+          W  G D++RLDG
Sbjct: 1156 KECEQIGDKVLVFSQSLYSLNIIEYFLGRIHDATQAGETDSVGGYSGSWCVGLDYFRLDG 1215

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
             +    R      FN P N R +  LIST+AG LGINL +ANRVII D SWNP++D+Q+I
Sbjct: 1216 SSSCDSRSMWCRTFNNPTNTRARLFLISTKAGGLGINLVAANRVIIFDVSWNPSHDIQSI 1275

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLF 1298
            YR +R+GQTKP + YR +  GTME KIY+RQVTK+ ++ RV+D QQ+ R  ++ ++  L+
Sbjct: 1276 YRVYRFGQTKPCYIYRFVTLGTMEMKIYERQVTKQAISKRVIDEQQIDRHYNQNDLAELY 1335

Query: 1299 EFGDDENPDPLTAVSKE 1315
            +F       P+  V K+
Sbjct: 1336 KFDPKPGDRPIPLVPKD 1352


>gi|189239270|ref|XP_001810058.1| PREDICTED: similar to transcriptional regulator ATRX (X-linked
            helicase II) [Tribolium castaneum]
          Length = 1848

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 269/737 (36%), Positives = 414/737 (56%), Gaps = 77/737 (10%)

Query: 632  KKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASI 691
            +K+IR I     L E TK+  A E+ER+ R+   Q +++   +  +              
Sbjct: 948  RKQIRNIWGRDSLAESTKQAEAEERERKARIAEKQKKYNQIYEFSSQ------------- 994

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK 751
              L   +   +++   +  +E +++  S+ +KLK HQ  G++FMW+   +S+ + KS  K
Sbjct: 995  --LNAKVDKVVLDFDEKNQKELLKVDDSLVSKLKPHQASGVQFMWDACFESLERAKST-K 1051

Query: 752  GLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE 810
            G GCILAH MGLGKT QVI   +T +  S    ++  L+V+P+N + NW  EF +W P +
Sbjct: 1052 GSGCILAHCMGLGKTLQVITLSHTLLINSEKTNVKKVLVVSPLNTVLNWVSEFKQWLP-D 1110

Query: 811  LKPLRVFMLEDVSRDRRAELLAK-WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA 869
             +   V+ L    ++   +   K W   GGV +IGY  FRNLS   +  ++ +++++  A
Sbjct: 1111 CEEYDVYELVSFKQNYERQYQVKTWHDHGGVLIIGYDMFRNLS---NPDNKRLSKKMRAA 1167

Query: 870  LQD-----GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
             Q+     GPD+++CDE H++KN + +T+ A+ ++K  RRI LTG+PLQNNL EY+CMV 
Sbjct: 1168 FQEALVDPGPDLVICDEGHLLKNEKTNTSIAMNRLKTLRRIVLTGTPLQNNLKEYFCMVQ 1227

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            FV+   LG+  E+ NRF NPI NGQ+T+ST  D++IM +RSH+L++ L G VQR D +V+
Sbjct: 1228 FVKPNLLGTYKEYLNRFVNPITNGQYTDSTPHDIQIMRKRSHVLHKMLDGVVQRRDYSVL 1287

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-FAGYQALAQIWN 1043
            +  LPPK  +V+ + L+  Q +LY+ ++D    + D  SN   R SF F  +QAL +I  
Sbjct: 1288 EPYLPPKHEYVLFLSLTETQIKLYQHYMDRFARSGDG-SN---RTSFLFVDFQALQRICT 1343

Query: 1044 HPGIL-------QLTKDKGYPSREDAEDSSSDENMDYNVVI-------------GEK--- 1080
            HP +L       +L K+K     E++E S  D   D +                GEK   
Sbjct: 1344 HPRVLLDKSIEMKLAKEKRDDESEESEGSLKDFINDDDEEEESTGSSNSSSDEGGEKKSA 1403

Query: 1081 -PRN----MNDFLQGKND--------DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
             PR         L  +N         +   +K+WW +         + +S K+ LL +IL
Sbjct: 1404 APRKRVTRAAAALAKENGEPEEIITLEDTVEKEWWQEYCDGDELNNIAHSSKLFLLFEIL 1463

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL---------WKKGKDWYRLDG 1178
              C  +GDK LVFSQS+ +L++IE++L ++    + G+          W  G D++RLDG
Sbjct: 1464 KECEQIGDKVLVFSQSLYSLNIIEYFLGRIHDATQAGETDSVGGYSGSWCVGLDYFRLDG 1523

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
             +    R      FN P N R +  LIST+AG LGINL +ANRVII D SWNP++D+Q+I
Sbjct: 1524 SSSCDSRSMWCRTFNNPTNTRARLFLISTKAGGLGINLVAANRVIIFDVSWNPSHDIQSI 1583

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLF 1298
            YR +R+GQTKP + YR +  GTME KIY+RQVTK+ ++ RV+D QQ+ R  ++ ++  L+
Sbjct: 1584 YRVYRFGQTKPCYIYRFVTLGTMEMKIYERQVTKQAISKRVIDEQQIDRHYNQNDLAELY 1643

Query: 1299 EFGDDENPDPLTAVSKE 1315
            +F       P+  V K+
Sbjct: 1644 KFDPKPGDRPIPLVPKD 1660


>gi|427793147|gb|JAA62025.1| Putative transcriptional regulator atrx, partial [Rhipicephalus
            pulchellus]
          Length = 2147

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 283/756 (37%), Positives = 413/756 (54%), Gaps = 97/756 (12%)

Query: 627  GKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLS 686
            G  K ++ IRR++ D EL ++T+     E+ER+ R+       + + KL   V       
Sbjct: 718  GDGKGRRNIRRLISDEELAQQTRAAAEAEEERKRRI-------AERRKLYYEVL------ 764

Query: 687  AGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKV 746
             G  +    +  T  ++ +  +  E  V++   +   +K HQV G++F+++ +I+S+  +
Sbjct: 765  -GTEVGDTHETTTELVLEMDLQTKEPLVQVDEKLVKFMKPHQVKGVKFIYDCVIESLEML 823

Query: 747  KS-GDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALIVTPVNVLHNWKQEF 803
            K   +KG GCILAH MGLGK+FQVI+FL+T M     G  L TAL++ P N ++NW  EF
Sbjct: 824  KKDPEKGSGCILAHCMGLGKSFQVISFLHTMMTHKEAGPLLNTALVICPYNTVYNWANEF 883

Query: 804  MKWRPSELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNL--SFGKHVKDR 860
             +W       ++V+ +  +  +  R E L +W ++GGV +IGY+ F +L    GK  K  
Sbjct: 884  DQWLHRNGLDMKVYEVSSIKVNLLRLETLERWHSEGGVAIIGYSLFCHLIKGSGKRKKTA 943

Query: 861  NMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
             ++R     L  GP +++CDE H++KN     ++AL  +K  RRI LTG+PLQNNL EY+
Sbjct: 944  LLSRYRKILLNPGPRLVICDEGHVLKNANTGVSKALSTLKTGRRIVLTGTPLQNNLREYH 1003

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
            CMV F++ G LG+  EF NRF NPI NGQ  +ST  DV++M +R HIL+  L+GFVQR D
Sbjct: 1004 CMVSFIKPGLLGTKTEFINRFVNPIGNGQCADSTLHDVQLMKKRVHILHRLLEGFVQRCD 1063

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD--LHGFTNDRVSNEKIRKSFFAGYQAL 1038
             + +   LPPK  +VI V+LS +Q  LY+ FL+    G  + R++N     S F  Y  L
Sbjct: 1064 KSALAPYLPPKHEYVIRVRLSDVQVSLYRHFLEHLTVGANDQRMNN----ISLFTDYFTL 1119

Query: 1039 AQIWNHPGILQLTKD----KGYPSREDAEDSSS------------------DENMDYNVV 1076
              I  HP +L+L+ D    + + + +D E+S S                  DE++D    
Sbjct: 1120 QNISMHPLLLELSDDRVTARDFLNDDDEEESDSAIPFIDDVLSEKSTSDATDEDVDA-AD 1178

Query: 1077 IGEKPRNMNDFLQGKNDDG----------------------------FFQKDWWNDLLHE 1108
             GE    + +  +  N DG                              +K WW++ + E
Sbjct: 1179 TGEPAVPLKEGYEKDNIDGGSGAVKSTSLYHTRSRGDVENRPPTPPELKKKQWWDEFVSE 1238

Query: 1109 HTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK--- 1165
               ++L  SGK+ L  DIL  C  +GDK L+FSQS+ TLDL+E  L +       G+   
Sbjct: 1239 EEIEKLQISGKLTLFYDILQECDAIGDKVLLFSQSLLTLDLVERMLEQCNGRTPTGETET 1298

Query: 1166 --------------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGS 1211
                           W  G D++R+DG T    R + +  FN+  N R +  L+STRAGS
Sbjct: 1299 DPADPADPLKDCHNTWVLGIDYFRIDGGTSVDLRSRWISMFNDENNHRGRLFLVSTRAGS 1358

Query: 1212 LGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVT 1271
            LG NL  ANRV+I+D SWNPT+D QAI+R +R+GQ KPVF YRL+A GTMEEKIY RQVT
Sbjct: 1359 LGTNLVGANRVVIMDASWNPTHDTQAIFRVYRFGQKKPVFIYRLLAQGTMEEKIYNRQVT 1418

Query: 1272 KEGLAARVVDRQQVHRTISKEEMLHLFEF---GDDE 1304
            K  LA RVVD++ V R  +  E++ L+ F   G DE
Sbjct: 1419 KLALACRVVDKRHVGRLFNAAELVDLYTFNPVGKDE 1454



 Score = 67.0 bits (162), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 43/91 (47%)

Query: 504 HPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKR 563
           H H +LNVIVCK C          +    S+ YC WC     LV C  C  +FC  C+ R
Sbjct: 2   HKHKLLNVIVCKRCYQYYGDGQFRQPGSDSDEYCSWCAEGGILVLCDRCGRVFCKECISR 61

Query: 564 NISEACLSDEVQASCWQCCCCSPSLLKRLTS 594
           N+S   L+       WQC  C P+ L+ + +
Sbjct: 62  NLSCQELNRIESLDEWQCFVCDPAPLEPMVN 92


>gi|328721366|ref|XP_001942895.2| PREDICTED: transcriptional regulator ATRX homolog [Acyrthosiphon
            pisum]
          Length = 1045

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/713 (38%), Positives = 401/713 (56%), Gaps = 54/713 (7%)

Query: 608  SSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQV 667
            S   SDS+NSDA +N  +   +K +K IR++    EL E T+  +  E  R +R++  Q 
Sbjct: 240  SEEASDSDNSDASHNHHLP--KKGRKNIRKMKKKDELSEVTQNALKEEVIRMKRIEKRQK 297

Query: 668  QFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAH 727
            +++   KL N           A +E     +  + VN +    EE V +   +   LK H
Sbjct: 298  EYN---KLCN---------LPAPMESCKKLVLDFDVNTL----EELVIVHPDLVKFLKPH 341

Query: 728  QVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTA 787
            QV GI+F+W ++ +S+ ++K   KG G ILAH MGLGKT Q+IA ++T  R    G++T 
Sbjct: 342  QVEGIKFLWNSVFESLARIKEH-KGNGSILAHCMGLGKTLQIIALVHTLFRYPETGIKTV 400

Query: 788  LIVTPVNVLHNWKQEFMKWRPS--ELKPLRVFMLEDV-SRDRRAELLAKWRAKGGVFLIG 844
            L++TP   + NW +EF KW     E K   V    D  + + R  ++ +W+   GV +  
Sbjct: 401  LVITPNATIENWCKEFHKWLQDIDEEKNFLVLNFTDSKTYEGRKNIVDEWKRDHGVLVTS 460

Query: 845  YTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQR 903
            Y  FR++   K++   +    I   L D GPD+++CDE H++KN     ++++ ++K  R
Sbjct: 461  YQLFRSVVNYKNI---DKFPTISEGLVDPGPDLVICDEGHILKNHSTAISKSVNRIKTLR 517

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            RI LTG+PLQNNL EY+CMVDF+R   LGS  +F NRF NPI NGQ+++S   DVKIM +
Sbjct: 518  RIVLTGTPLQNNLREYHCMVDFIRPNLLGSIKDFTNRFINPITNGQYSDSNVRDVKIMKR 577

Query: 964  RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS 1023
            RSH+L+  L+GFVQR D +V+   LP K  +VI +K++  Q  LY+++L           
Sbjct: 578  RSHVLHRMLEGFVQRFDYSVLTPFLPTKHEYVIYLKMADKQIELYQKYL----------- 626

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQL-----------TKDKGYPSREDAEDSSS-DENM 1071
            NE  +   F+ Y  L  +W HP +L L            K K   SR  A DSS  D+N 
Sbjct: 627  NEYRQSELFSNYHMLQMVWTHPKLLALYLKRIESKQEKQKLKVAESRFVAGDSSDVDDNS 686

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 1131
            +    +   P    D    KN D  +  DWW  L+     + +    K +++  IL  C 
Sbjct: 687  NSVDEVERMPVPGFDLPNDKNTDKHYT-DWWKPLVSRAEMESVYPYSKFIMMFSILQECE 745

Query: 1132 NMGDKSLVFSQSIPTLDLIEFYLSKLP----RPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
            ++GDK L+FSQS+ TLDLI+ +L          G  GK W  G D+YR+DG   S  R+ 
Sbjct: 746  DIGDKVLLFSQSLLTLDLIQDFLENAEDIDDDGGPYGKSWTHGVDFYRIDGSANSRTRED 805

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
              ERFN+  N +++  L+ST+A +LGINL  ANRVII D +WNP+ ++Q+I+R +R+GQ 
Sbjct: 806  FCERFNDITNTKMRLLLLSTKAFNLGINLIGANRVIIFDVTWNPSLNVQSIFRVFRFGQK 865

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            KP + YRL++ GTME+KIY+RQ++K   A RVVD  Q+ R  + +    L+EF
Sbjct: 866  KPCYIYRLISEGTMEQKIYERQISKLSTAFRVVDEHQIDRHFNLKCQEELYEF 918


>gi|428180789|gb|EKX49655.1| hypothetical protein GUITHDRAFT_135832 [Guillardia theta CCMP2712]
          Length = 955

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/648 (39%), Positives = 386/648 (59%), Gaps = 56/648 (8%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII--QSIRKVKSG---------- 749
            I+N   E   + +RI   ++ ++K HQ+ G+RFMW  ++  +S +K + G          
Sbjct: 189  IINPQAESSSQ-IRIHPKLAVRMKDHQIEGVRFMWRRLMDGRSDKKARGGLGSLLALEEN 247

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSV---NLGLRTALIVTPVNVLHNWKQEFMKW 806
            DKG GCILAH MGLGKTFQVI  L+T   ++   N+ LR  L++ PVN LHNWK E  +W
Sbjct: 248  DKGTGCILAHNMGLGKTFQVITLLHTIAANIPRDNVELRRMLVLGPVNTLHNWKAELERW 307

Query: 807  RPSELK-----PLRVFMLEDVSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD 859
             P   +      + +++L++  R    R + L  W  +GGV  +GY  +RNL  G  + D
Sbjct: 308  LPDGGRLPCGRQIEIYILDEAGRTTKSRCDCLELWFRRGGVMCMGYEMYRNLGQGTRIND 367

Query: 860  RNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLME 918
            + +  ++   L+  GP I++ DE H+++N +++ ++AL  V+ +RR+ LTGSPLQNNL E
Sbjct: 368  KELRGKLHRFLKSPGPGIVIADEGHILRNHKSNISKALSGVETKRRVVLTGSPLQNNLTE 427

Query: 919  YYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQR 978
            Y+CMVDF+  G+LGS  +FRNRF+ PI NG+  ++   DV++M +R+ +L+++L   VQR
Sbjct: 428  YHCMVDFINPGYLGSLSDFRNRFEIPILNGEAEDADERDVQVMKRRNFVLHQKLCHMVQR 487

Query: 979  MDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL 1038
             D   + K LPPK  F + ++LSPLQ+RLY+  ++           E   +S F  +  L
Sbjct: 488  KDYTPLIKALPPKFEFTLQIRLSPLQQRLYRYAVE--------NQEECGIESVFKAFHTL 539

Query: 1039 AQIWNHPGILQLTKDKGYPSREDAEDS------SSDENMD---YNV-VIGEKPRNMNDFL 1088
             +IWNHP IL     K +P  ++  +S      S+ E MD   Y+  V    P  ++   
Sbjct: 540  MKIWNHPAIL--WNSKKHPEDDNQTESNAGTANSNTETMDGDDYDSDVQCTDPPPLSKLF 597

Query: 1089 QGKNDDGFFQKDWWNDL-----LHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 1143
               N +  +   W+  L     L+E +   L++SGK+++L  +LT  S + +K LVFSQS
Sbjct: 598  GRGNQNKPYNASWYMKLFEAANLNEESVMSLEHSGKVLVLWKLLTEASRVDEKVLVFSQS 657

Query: 1144 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1203
            +  LD+IE  L + P     GK +++  D+YRLDG   S +RQ  ++ FN+  N R +  
Sbjct: 658  LTMLDVIEKLLERNP---VCGKYYRREHDYYRLDGSRSSKQRQDDIDNFNDIANSRARLF 714

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            LISTRAGSLG+N+ +ANRV++ D S+NP++DLQAI+R +RYGQT+PV+ YRL++ GTMEE
Sbjct: 715  LISTRAGSLGVNMVAANRVVLFDCSFNPSHDLQAIFRTYRYGQTRPVYVYRLVSWGTMEE 774

Query: 1264 KIYKRQVTKEGLAARVVDRQQVHRTISKE----EMLHLFEFGDDENPD 1307
            KIYKRQ+ K+  +AR VD  QV R    +    EM  L    D+ N D
Sbjct: 775  KIYKRQINKQSRSARAVDSWQVQRHFKGKDLEFEMKELLTLHDEVNLD 822


>gi|390337585|ref|XP_783354.3| PREDICTED: helicase ARIP4-like [Strongylocentrotus purpuratus]
          Length = 1339

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/666 (39%), Positives = 377/666 (56%), Gaps = 70/666 (10%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VNV     +  + +P  I+  +K HQ+ GIRF+++N+++S+++ K+   G GCILAH+M
Sbjct: 346  LVNVNHPPDDPDIYLPDHIARAVKPHQIGGIRFLYDNLVESLQRYKASS-GFGCILAHSM 404

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            GLGKT Q IAF+Y  M+       T L + P+N L NW  EF  W P   +   +F+L D
Sbjct: 405  GLGKTLQCIAFIYNFMKYSMA--HTVLCIVPINTLQNWLAEFDMWCPERPRHFNIFVLND 462

Query: 822  VSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-----KDRN------------- 861
            + + +  RA+++A+WR  GGV L+GY  +R L+  K       K R              
Sbjct: 463  MHKTQTSRAKVIAEWRQSGGVLLMGYEMYRLLARSKQASLGRPKKRTSKSGKSSPQIIDI 522

Query: 862  --------MAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPL 912
                    MA ++  AL   GPD++VCDE H IKN+ A  +QALK ++ +RR+ LTG PL
Sbjct: 523  DEMEAAAEMAIDMKAALCNPGPDMVVCDEGHRIKNSHAGISQALKGIRTRRRVVLTGYPL 582

Query: 913  QNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQL 972
            QNNL EY+CMVDFVR  FLG+ HEF N F+ PI NGQ  +ST  DV++M  R+H+L+  L
Sbjct: 583  QNNLQEYWCMVDFVRPNFLGTRHEFANLFERPISNGQCMDSTPYDVRLMRYRAHVLHSLL 642

Query: 973  KGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS---NEKIRK 1029
             GFVQR   NV+   LPPK   VI V+L+  QR LY RF+    FT        +    K
Sbjct: 643  SGFVQRRGFNVLLSTLPPKEEHVIMVRLTSFQRGLYIRFMQC--FTEAGAGGWCSSNPLK 700

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDE---NMDYNVVIGEKPRNMND 1086
            +F  G     +IWNHP IL          +++  DS++DE   ++D   V  +       
Sbjct: 701  AFSVG----CKIWNHPDILSDQLSIRDSVKDNVRDSAADELDADLDLPEVQAKCTGRQQK 756

Query: 1087 FLQ-------------GKNDDGFFQK-------DWWNDLLHEHTYKELDYSGKMVLLLDI 1126
             L+             G +  G+  K       +W  D++  +T  +L   GK+++L  I
Sbjct: 757  LLKKPAAEERSSRRGEGSSSGGYIDKVQQIISFEWARDIMKNYTRNKLCNGGKIIVLFHI 816

Query: 1127 LTMCSNMGDKSLVFSQSIPTLDLIEFYLSK------LPRPGKQGKLWKKGKDWYRLDGRT 1180
            L     +GDK LVFSQS+  L +IE +L+K         P    + W + + ++RLDG T
Sbjct: 817  LEESIRLGDKILVFSQSLSCLSVIEKFLAKSTIPQPPNPPPLMPREWVRNQTYFRLDGST 876

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
              SER+K++ RFN P NK +   L+ST+AG LGINL  ANRV+++D SWNP +D QA+ R
Sbjct: 877  AVSEREKMINRFNSPDNKTIMLFLLSTKAGCLGINLIGANRVVVMDASWNPCHDAQAVCR 936

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
             +RYGQTK    YRL++  T+E+KIY RQ++K+G++ RVVD       ++K+E+  L EF
Sbjct: 937  VYRYGQTKKCHVYRLVSDQTLEKKIYDRQISKKGMSDRVVDEMNPEMNLTKKEVESLLEF 996

Query: 1301 GDDENP 1306
             + + P
Sbjct: 997  DETDMP 1002


>gi|351711933|gb|EHB14852.1| Helicase ARIP4, partial [Heterocephalus glaber]
          Length = 1421

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 273/716 (38%), Positives = 400/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 197  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 255

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 256  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 313

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 314  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 373

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 374  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 433

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 434  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 493

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 494  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 552

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSD----- 1068
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+ SS      
Sbjct: 553  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELSSAGTSVR 610

Query: 1069 --------ENMDYNVV--IGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                    +  D  +V  +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 611  CPPQGTKVKGEDSTLVSSVGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 668

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP------GKQGK 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K   P      G+ G+
Sbjct: 669  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGVEGQGGQ 728

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N+     L+STRAG LG+NL  ANRV++ 
Sbjct: 729  KWVRNISYFRLDGSTPAFERERLITQFNDPSNRSTWLFLLSTRAGCLGVNLIGANRVVVF 788

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 789  DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 848

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 849  MLNFTRKEVENLLHFVEKE-PAPQASLNIKGIKESVLQFACLKYPHLITKEPFEHE 903


>gi|428181773|gb|EKX50636.1| hypothetical protein GUITHDRAFT_161847 [Guillardia theta CCMP2712]
          Length = 1341

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 297/833 (35%), Positives = 444/833 (53%), Gaps = 94/833 (11%)

Query: 535  CYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTS 594
            C+       ++L+ CK C  ++  TC K   ++  LSD      W+C  C P   K  T+
Sbjct: 298  CFKCKIKNDAELLVCKGCDKVWHRTCAKVEETKT-LSDS-----WRCEKCKPG--KNGTN 349

Query: 595  ELGRAM---------GSENLIVSSSESDSENSD--ADNNLKIGGKRKQKKKIRRILDDAE 643
            ++ RA+           E++  S S SD+E++   A+  L     R  + + R++     
Sbjct: 350  KMRRAVVESESESSANEESIGSSDSWSDAESTMMVAEKELSTTSGRVTRSEARKL----G 405

Query: 644  LGEETKRKIAIEKERQERLKSLQVQFSS-----KSKLMNSVTLDGDLSAGA--------- 689
            +G   K K   + ++++   S Q +  +     + +L     L  D+   A         
Sbjct: 406  VGANNKAKDQSQGKQEDSSDSKQNKEENSRPIKRRRLRKPHQLSTDMIRAAEEGQKADQM 465

Query: 690  -------SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQS 742
                   S E +G  +   ++   RE GEE V +PS +  +L+AHQ VG+RFMWE  ++ 
Sbjct: 466  RKEMREESAENVGAPL---VLKACRE-GEEDVALPSCLYEELQAHQRVGVRFMWETTMR- 520

Query: 743  IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM--RSVNLGLRTALIVTPVNVLHNWK 800
                    +G GCILAH MGLGKT QVI  LY A+  +S     +T LI+TPVN L NW+
Sbjct: 521  --------EGKGCILAHCMGLGKTLQVICVLYAALVSKSEEGKKKTILILTPVNTLRNWE 572

Query: 801  QEFMKW-RPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD 859
             EF KW  PS   P+RV M        R   + +W  +GGV LIGY  FRNL+ GK+V+ 
Sbjct: 573  AEFRKWILPSMSLPVRVLMDAGCQNKARLAYIEEWMEEGGVMLIGYEQFRNLALGKNVRG 632

Query: 860  RN---MAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNN 915
            +    + + +   L + GP  +VCDE H+++N  +  +  ++ +   RRI LTG+PLQNN
Sbjct: 633  KGSVKLKQRLAECLLKPGPWAVVCDEGHVLRNEDSGLSSTVRDISTLRRIVLTGTPLQNN 692

Query: 916  LMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF 975
            L EY+CMVDFVR G LG S+ F+  F NPI +GQ  ++  ++VK+M +RSHIL+  LK  
Sbjct: 693  LREYHCMVDFVRPGLLGESNAFKRDFVNPILHGQCIDAQPDEVKLMKKRSHILHSLLKCC 752

Query: 976  VQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL-DLHGFTNDRVSNEKIRKSFFAG 1034
            V R D  V+   L  K  FVI ++LS LQ  LY+++L D+    +        +   F  
Sbjct: 753  VDRADFKVLAPFLSKKYEFVIAIRLSKLQSDLYQKYLSDVLSMESPETGGLSSKVRLFEA 812

Query: 1035 YQALAQIWNHPGILQLTK---DKGYPSRED-----------------AEDSSSDENMDYN 1074
            Y +L+++W +P +L++ K   +  Y S ED                  +     ++    
Sbjct: 813  YHSLSKVWTNPKVLEMEKKAEEDDYDSMEDFIVWSDEESSSTESSSGGKPKKRSKSKRSR 872

Query: 1075 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMG 1134
              + ++ + + D ++  +      K WW+D        E + +GK + L  +L     MG
Sbjct: 873  SSLSDEEQLIPDPVKSSSSKEDRNKLWWDDFRESVEQIEPEATGKFLFLKLLLNETCEMG 932

Query: 1135 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK-------LWKKGKDWYRLDGRTESSERQK 1187
            DK LVFSQS+  LDLIE  L      G+  K        W+KG+D+YRLDG    ++RQ 
Sbjct: 933  DKVLVFSQSLGVLDLIEEMLKMAGERGEGLKNSKGVYRPWRKGRDYYRLDGSVGGNKRQS 992

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
             +E FN    K+ +  LISTRAGSLGINL SANR++++D SWNP++D QAI+R++R GQ 
Sbjct: 993  DIENFN--ATKKARLFLISTRAGSLGINLFSANRIVLMDASWNPSFDTQAIFRSYRLGQE 1050

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            K V+ YRL+AHGTME+KIY RQ+TK+ LA+RVVD ++  R  +  E+  L EF
Sbjct: 1051 KEVYVYRLLAHGTMEQKIYGRQITKQALASRVVDSEETGRLFTDNELKALLEF 1103


>gi|327265769|ref|XP_003217680.1| PREDICTED: helicase ARIP4-like [Anolis carolinensis]
          Length = 1479

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/689 (37%), Positives = 381/689 (55%), Gaps = 96/689 (13%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA    IVN+     EE + +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 255  DASGQVIVNINHPPNEEDIYLAPQLARAVKPHQIGGIRFLYDNLVESLDRFKTS-SGFGC 313

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ 809
            ILAH+MGLGKT QVI+FL    R +    +T L + PVN L NW  EF  W P+      
Sbjct: 314  ILAHSMGLGKTLQVISFLDVLFRHIEA--KTVLAIVPVNTLQNWLAEFNMWLPASEALPA 371

Query: 810  -----ELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
                 E++P   +V +L D  +    RA+++  W   GGV L+GY  +R LS  K     
Sbjct: 372  DYDPKEMQPRTFKVHILNDEHKTTAARAKVVTDWVTDGGVLLMGYEMYRLLSLKKSFAVG 431

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + + + + I  AL + GPD+++CDE H IKN  A T+QAL
Sbjct: 432  RKKKSKKQTGPVIIDLDEEDRQQELLKGIEKALSRPGPDVVICDEGHRIKNCHASTSQAL 491

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 492  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 551

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR   NV+K  LP K   VI V+LS +QR LY  F++   
Sbjct: 552  DVRLMRYRSHVLHSLLEGFVQRRGHNVLKVQLPSKEEHVILVRLSKIQRALYTEFMN--- 608

Query: 1017 FTNDRVSNEKIRKSFFAGYQAL---------AQIWNHPGILQLTKDKGYPSRE---DAED 1064
                     + R +  +G+  L          +IWNHP +L     K   + E   D +D
Sbjct: 609  ---------RFRDAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVDD 659

Query: 1065 SSS---------------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWW 1102
              +                EN      +GE     + ++QG   + F ++       +W 
Sbjct: 660  LGTAGTNSRCQPQGVKGKAENNALASPVGEA--TNSKYIQGIGFNPFQERANQVVTYEWA 717

Query: 1103 NDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
             D+L ++    L  S KMVLL  ++     +GDK LVFSQS+ TL +IE +L+K P P  
Sbjct: 718  KDILCDYQTGVLQNSPKMVLLFHLVEESVKLGDKILVFSQSLSTLSVIEDFLAKRPMPSP 777

Query: 1163 QG------KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
             G        W +  ++YRLDG T +SER++L+ +FN+P N  V   L+STRAG LG+NL
Sbjct: 778  PGLEAQAIHTWVRNVNYYRLDGSTSASERERLINQFNDPTNTSVSLFLLSTRAGCLGVNL 837

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              ANRV++ D SWNP +D QA+ R +RYGQ KP   YRL++  T+E+KIY RQ++K+G++
Sbjct: 838  IGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVSDFTLEKKIYDRQISKQGMS 897

Query: 1277 ARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
             RVVD        ++ E+ +L  F ++E+
Sbjct: 898  DRVVDDLNPVLNFTRREVENLLHFVEEES 926


>gi|197387226|ref|NP_001127992.1| helicase ARIP4 [Rattus norvegicus]
 gi|149018631|gb|EDL77272.1| Rad54 like 2 (S. cerevisiae) (predicted) [Rattus norvegicus]
          Length = 1299

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 272/714 (38%), Positives = 396/714 (55%), Gaps = 79/714 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 242  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSS-GFGC 300

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 301  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 358

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA++   W ++GGV L+GY  +R L+  K +   
Sbjct: 359  DSKPEEIQPRFFKVHILNDEHKTVASRAKVTTDWVSEGGVLLMGYEMYRLLTLKKSLATG 418

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 419  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 478

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 479  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 538

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 539  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMDRF- 597

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSDENMDY 1073
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 598  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSTR 655

Query: 1074 NVVIGEK--------PRNMND-----FLQGKNDDGFFQK-------DWWNDLLHEHTYKE 1113
                G K        P +M +     FLQG   + F ++       +W  DLL  +    
Sbjct: 656  CPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQTGV 715

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGKLW 1167
            L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P    G+  + W
Sbjct: 716  LENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCPPGAEGQGAQKW 775

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
             +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ D 
Sbjct: 776  VRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDA 835

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD      
Sbjct: 836  SWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPML 895

Query: 1288 TISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
              +++E+ +L  F + E P P T++  +  + S     C     L  K P  HE
Sbjct: 896  NFTRKEVENLLHFVEKE-PAPQTSLDIKGIKESVLQLACLKYPHLITKEPFEHE 948


>gi|241634353|ref|XP_002410509.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215503438|gb|EEC12932.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 1597

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 277/737 (37%), Positives = 402/737 (54%), Gaps = 81/737 (10%)

Query: 606  IVSSSESDSENSD-----ADNNLKIGGK-RKQKKKIRRILDDAELGEETKRKIAIEKERQ 659
            + +SSE D E SD      +++ + G K RK  +K+R +      G+ET+     E+ER+
Sbjct: 705  VAASSEDDKEKSDDSVEIINSSQEAGNKSRKNLRKLRPV------GDETRAAAKAEEERK 758

Query: 660  ERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSS 719
            +R++  Q +  S S   N +        G + E     +   ++ +  +  E  V +   
Sbjct: 759  KRVQERQ-KLQSDSSQFNEIR-------GGAPECGNTTLEELVLEMDLKTKEPLVTVNQK 810

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK-GLGCILAHTMGLGKTFQVIAFLYTAMR 778
            +   +K HQV G++FM++  I+S+  +K   K G GCILAH MGLGKTFQVI+FL+T + 
Sbjct: 811  LVKCMKPHQVDGVKFMYDCTIESLEMLKKDPKKGSGCILAHCMGLGKTFQVISFLHTVLS 870

Query: 779  SVNLG--LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR-RAELLAKWR 835
              + G  LRTALIV P N + NW  EF +W   +   L V  +  V  +  R E+L  W+
Sbjct: 871  HKDCGKILRTALIVCPYNTILNWAHEFERWLEDKGLDLTVHEMSSVKDNHSRVEILEYWQ 930

Query: 836  AKGGVFLIGYTAFRNLSF--GKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
             KGG  ++GY  FR L+    K V  R   R     L  GPDI+ CDE H++K+ +   +
Sbjct: 931  KKGGALIMGYDMFRRLTNEKAKGVSKRLKERLRKALLDPGPDIVACDEGHILKSDKTGLS 990

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
             A+  ++  RRI LTG+PLQNNL EY+CMV FV+   LG+  EF NRF NPI NGQ  +S
Sbjct: 991  IAMNSLRTGRRIVLTGTPLQNNLQEYHCMVQFVKPNLLGTKKEFTNRFVNPIANGQCADS 1050

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
            T+ DV++M +R HIL+  L G VQR D N +K  LPPK  +VI+V+LS +Q +LY+ FLD
Sbjct: 1051 TALDVRLMKKRVHILHRLLNGCVQRCDYNALKPFLPPKCEYVISVRLSEVQVQLYRHFLD 1110

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
             H     R        S F  +  L  IW HP +L ++ ++   ++E  +D SSD     
Sbjct: 1111 -HLARGGRNRKPTQGMSLFWDFNMLRNIWTHPMLLVMSAERAT-AKELLKDESSD----- 1163

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNM 1133
                     +M+ F+   +                 +        K V+ LD     ++ 
Sbjct: 1164 ---------SMDSFIDDGS----------------ESSSSKSDDDKEVVCLDEDKPSTSK 1198

Query: 1134 GDKSLVFSQSIPTLDLIEFYLSKLP------RPGKQGK-----------LWKKGKDWYRL 1176
            G   L+FSQS+ TL+++E  L +        +P   G+            W  G D++R+
Sbjct: 1199 G---LLFSQSLLTLNMVEKLLEQCDERASAVQPDATGEDPSDPLQDCHNTWISGIDYFRM 1255

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG T    R++ +E FN+  N R +  LIST+AGSLG NL  ANRV+++D SWNPT+D+Q
Sbjct: 1256 DGSTSVDLRKRWIEMFNDESNPRGRLFLISTKAGSLGTNLVGANRVVLMDASWNPTHDVQ 1315

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            AI+R +R+GQ KPVF YR +A GTMEEKIY RQVTK+ LA RVVD QQ+ R  +  +++ 
Sbjct: 1316 AIFRVYRFGQKKPVFIYRFLAQGTMEEKIYDRQVTKQSLACRVVDEQQIERHFNAADLME 1375

Query: 1297 LFEFGDDEN---PDPLT 1310
            L+ F  D     P P+ 
Sbjct: 1376 LYSFSPDSKSNRPTPMV 1392



 Score = 70.9 bits (172), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 15/165 (9%)

Query: 490 KFYCTACNNVAIEVHP-----HPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSS 544
           +  CTAC        P     H  L VI+C++C       +  KD+  ++ YC WC    
Sbjct: 25  RVMCTACGEQVNHFDPKKVLIHKHLKVILCRNCYKRYGDGIFQKDSSGADEYCRWCAEGG 84

Query: 545 DLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLT--SELGRAMGS 602
            LV C SC   FC +C++RN+S   L        W C  C  S ++ L   +++ R    
Sbjct: 85  SLVVCDSCSRSFCKSCIRRNLSRKELGRITSLDVWNCYVCDASPIQGLVNYADMIREFSK 144

Query: 603 E------NLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDD 641
           +      N +V S++S S     +  LK+    +   +I+R LD+
Sbjct: 145 KQQQRPSNQLVPSADSPSGKVSEEVQLKMIA--EMTSQIQRTLDE 187


>gi|417406519|gb|JAA49913.1| Putative dna repair protein snf2 family [Desmodus rotundus]
          Length = 1467

 Score =  455 bits (1170), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/688 (38%), Positives = 388/688 (56%), Gaps = 79/688 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLAQAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRLFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLLEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGASAR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE       FLQG   + F ++       +W  DLL+ +  
Sbjct: 657  CPSQGTKIKGEDSALGSAMGEA--TNTKFLQGVGFNPFQERGNNIVTYEWAKDLLNNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGK 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P    G+  +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGAEGQGAQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWARNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVS 1313
                +++E+ +L  F + E P P T+++
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAPQTSLN 921


>gi|395516940|ref|XP_003762641.1| PREDICTED: helicase ARIP4 [Sarcophilus harrisii]
          Length = 1477

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/682 (38%), Positives = 383/682 (56%), Gaps = 76/682 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   IVN+     EE + +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 255  DAMGQVIVNINHPPNEENIFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTS-SGFGC 313

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+FL    R      +T L + PVN L NW  EF  W         
Sbjct: 314  ILAHSMGLGKTLQVISFLDVLFRHTEA--KTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 371

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++  W ++GGV L+GY  +R LS  K     
Sbjct: 372  DYKPEEIQPRYFKVHILNDEHKTTAARAKVVTDWVSEGGVLLMGYEMYRLLSLKKSFATG 431

Query: 858  KDRNMAREICHALQD---------------------GPDILVCDEAHMIKNTRADTTQAL 896
            + +   +  C  + D                     GPD+++CDE H IKN  A T+QAL
Sbjct: 432  RKKKTKKPACPVIIDLDEEDRQQELMKGIEKALSRPGPDVVICDEGHRIKNCHASTSQAL 491

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 492  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 551

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR   +V+K  LP K   VI V+LS +QR LY  F++   
Sbjct: 552  DVRLMRYRSHVLHSLLEGFVQRRGHSVLKIQLPYKEEHVILVRLSKIQRALYTEFMNRF- 610

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSDENMDY 1073
               D  ++  +  +    +    +IWNHP +L     K   + E   D +D S+      
Sbjct: 611  --RDAGNSGWLGLNPLKAFCVCCKIWNHPDVLHEALQKENLANEQDLDVDDLSTAGTNAR 668

Query: 1074 NVVIGEKPR-------------NMNDFLQGKNDDGFFQK--------DWWNDLLHEHTYK 1112
                G K +               + FLQG      FQ+        +W  D+L ++   
Sbjct: 669  CQTQGIKVKTEGSTLASSGGEATNSKFLQGVGGFNPFQERANQVVTYEWAKDILCDYQTG 728

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQGKL--- 1166
             L+ S KMVLL  ++     +GDK LVFSQS+ TL +IE +L+K  +P  PG  G+    
Sbjct: 729  VLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLSVIEEFLAKRIMPCLPGSDGQGDQN 788

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
            W +   +YRLDG T +SER++L+ +FN+P N  V   L+STRAG LG+NL  ANRV++ D
Sbjct: 789  WIRNLSYYRLDGSTSASERERLINQFNDPNNSSVWLFLLSTRAGCLGVNLIGANRVVVFD 848

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 1286
             SWNP +D QA+ R +RYGQ KP   YRL++  T+E+KIY RQ++K+G++ RVVD     
Sbjct: 849  ASWNPCHDAQAVCRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDDLNPV 908

Query: 1287 RTISKEEMLHLFEFGDDENPDP 1308
               ++ E+ +L  F ++E PDP
Sbjct: 909  LNFTRREVENLLHFVEEE-PDP 929


>gi|363738464|ref|XP_414277.3| PREDICTED: helicase ARIP4 [Gallus gallus]
          Length = 1471

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/688 (38%), Positives = 383/688 (55%), Gaps = 95/688 (13%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   IVN+     EE + +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 250  DALGQVIVNINHPPNEEDIFLAPQLAHAVKPHQIGGIRFLYDNLVESLERFKTSS-GFGC 308

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ 809
            ILAH+MGLGKT QVI+FL    R      +T L + PVN L NW  EF  W P+      
Sbjct: 309  ILAHSMGLGKTIQVISFLDVLFRHTEA--KTVLAIVPVNTLQNWLAEFNMWLPAPENLPP 366

Query: 810  -----ELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
                 E++P   +V +L D  +    RA+++  W  +GGV L+GY  +R LS  K     
Sbjct: 367  DYNSKEVQPRTFKVHILNDEHKTTAARAKVVNDWVVEGGVLLMGYEMYRLLSLKKSFATG 426

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + + + + I  AL + GPD+++CDE H IKN  A T+QAL
Sbjct: 427  RKKKTKKQTGPVIIDLDEEDRQQELLKGIEKALSRPGPDVVICDEGHRIKNCHASTSQAL 486

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLGS  EF N F+ PI NGQ  +ST +
Sbjct: 487  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGSRQEFSNMFERPILNGQCIDSTPQ 546

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR   NV+K  LP K   VI V+LS +QR LY  F++   
Sbjct: 547  DVRLMRYRSHVLHSLLEGFVQRRGHNVLKVQLPSKEEHVILVRLSKIQRALYTEFMN--- 603

Query: 1017 FTNDRVSNEKIRKSFFAGYQAL---------AQIWNHPGILQLTKDKGYPSRE---DAED 1064
                     + R +  +G+  L          +IWNHP +L     K   + E   D +D
Sbjct: 604  ---------RFRDAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVDD 654

Query: 1065 ---SSSDENMDYNVV------------IGEKPRNMNDFLQGKNDDGFFQK-------DWW 1102
               +S++       V            +GE     + FLQ    + F ++       +W 
Sbjct: 655  LGTASTNSRCQPQAVKVKTESNALASPVGEA--TNSKFLQSVGFNPFQERANQVVTYEWA 712

Query: 1103 NDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
             D+L ++    L+ S KMVLL  ++     +GDK LVFSQS+ TL +IE +L+K P P  
Sbjct: 713  KDILCDYQTGVLENSPKMVLLFHLVEESVKLGDKILVFSQSLSTLSVIEEFLAKRPMPNP 772

Query: 1163 QGK-----LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
             G       W +   +YRLDG T +SER++L+ +FN+P N  V   L+STRAG LG+NL 
Sbjct: 773  PGSDGGVHNWVRNISYYRLDGSTSASERERLINQFNDPSNASVWLFLLSTRAGCLGVNLI 832

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRV++ D SWNP +D QA+ R +RYGQ KP   YRL++  T+E+KIY RQ++K+G++ 
Sbjct: 833  GANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSD 892

Query: 1278 RVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            RVVD        ++ E+ +L  F ++E+
Sbjct: 893  RVVDDLNPVLNFTRREVENLLHFVEEES 920


>gi|395733739|ref|XP_002813739.2| PREDICTED: helicase ARIP4 isoform 1 [Pongo abelii]
          Length = 1359

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 275/729 (37%), Positives = 399/729 (54%), Gaps = 109/729 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 135  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 193

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 194  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 251

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 252  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 311

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 312  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 371

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 372  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 431

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 432  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 490

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL---------------------------- 1048
               D  S+  +  +    +    +IWNHP +L                            
Sbjct: 491  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 548

Query: 1049 ---QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK------ 1099
               Q TK KG       EDS+   +M      GE     + FLQG   + F ++      
Sbjct: 549  CPPQGTKGKG-------EDSTLASSM------GEA--TNSKFLQGVGFNPFQERGNNIVT 593

Query: 1100 -DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-- 1156
             +W  DLL  +    L+ S KMVLL  ++    N+GDK LVFSQS+ TL LIE +L K  
Sbjct: 594  YEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVNLGDKILVFSQSLSTLALIEEFLGKRE 653

Query: 1157 LPRP----GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            +P P    G+  + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG L
Sbjct: 654  VPCPPGAEGQGAQKWVRNITYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCL 713

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K
Sbjct: 714  GVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISK 773

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----L 1328
            +G++ RVVD        +++E+ +L  F + E P P  +++ +  + S     C     L
Sbjct: 774  QGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHL 832

Query: 1329 KHKLPLSHE 1337
              K P  HE
Sbjct: 833  ITKEPFEHE 841


>gi|392350328|ref|XP_003750629.1| PREDICTED: LOW QUALITY PROTEIN: helicase ARIP4, partial [Rattus
            norvegicus]
          Length = 1074

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 272/714 (38%), Positives = 396/714 (55%), Gaps = 79/714 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 242  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSS-GFGC 300

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 301  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 358

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA++   W ++GGV L+GY  +R L+  K +   
Sbjct: 359  DSKPEEIQPRFFKVHILNDEHKTVASRAKVTTDWVSEGGVLLMGYEMYRLLTLKKSLATG 418

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 419  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 478

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 479  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 538

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 539  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMDRF- 597

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSDENMDY 1073
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 598  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSTR 655

Query: 1074 NVVIGEK--------PRNMND-----FLQGKNDDGFFQK-------DWWNDLLHEHTYKE 1113
                G K        P +M +     FLQG   + F ++       +W  DLL  +    
Sbjct: 656  CPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQTGV 715

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGKLW 1167
            L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P    G+  + W
Sbjct: 716  LENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCPPGAEGQGAQKW 775

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
             +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ D 
Sbjct: 776  VRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDA 835

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD      
Sbjct: 836  SWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPML 895

Query: 1288 TISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
              +++E+ +L  F + E P P T++  +  + S     C     L  K P  HE
Sbjct: 896  NFTRKEVENLLHFVEKE-PAPQTSLDIKGIKESVLQLACLKYPHLITKEPFEHE 948


>gi|134085395|ref|NP_001076824.1| helicase ARIP4 [Xenopus (Silurana) tropicalis]
 gi|166217265|sp|A4IHD2.1|ARIP4_XENTR RecName: Full=Helicase ARIP4; AltName: Full=Androgen
            receptor-interacting protein 4; AltName: Full=RAD54-like
            protein 2
 gi|134023855|gb|AAI35474.1| rad54l2 protein [Xenopus (Silurana) tropicalis]
          Length = 1396

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 268/723 (37%), Positives = 397/723 (54%), Gaps = 102/723 (14%)

Query: 667  VQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITG------YIVNVVREKGEEAVRIPSSI 720
            +Q S  +   N V  DGD++   S   + DA+         +VN+     E+ + +   +
Sbjct: 208  LQISDNADSTNEV--DGDITTENSGSHVNDALNQADHLGRVLVNINHPPNEKDIFLAPQL 265

Query: 721  SAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV 780
            +  +K+HQ+ GIRF+++N+++S+ +  SG  G GCILAH+MGLGKT QVI+FL    +  
Sbjct: 266  ARAVKSHQIGGIRFLYDNLVESLERF-SGSSGFGCILAHSMGLGKTLQVISFLDVLFQHT 324

Query: 781  NLGLRTALIVTPVNVLHNWKQEFMKWRPS----------ELKPLRVFMLEDVSRDR---- 826
            +   +T L + PVN L NW  EF  W P           EL   R F +  ++ +     
Sbjct: 325  SA--KTVLAIVPVNTLQNWLAEFNMWLPPPESLPKDHNQELVQPRAFKVHTMNDEHKTTA 382

Query: 827  -RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-----------------------KDRNM 862
             RA+++  W   GGV L+GY  +R LS  K                         + + M
Sbjct: 383  ARAKVVNDWATDGGVLLMGYEMYRLLSLKKSFTAGRKKKSKKAAGPVIIDLDEEDRQQEM 442

Query: 863  AREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 921
             + I  AL + GPD+++CDE H IKN  A T+QALK ++ +RR+ LTG PLQNNL+EY+C
Sbjct: 443  LKGIEKALSRPGPDVVICDEGHRIKNCHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWC 502

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 981
            MVDFVR  FLG+  EF N F+ PI NGQ  +ST +D ++M  RSH+L+  L+GFVQR   
Sbjct: 503  MVDFVRPDFLGTRQEFSNMFERPILNGQCVDSTPQDKRLMRYRSHVLHSLLEGFVQRRGH 562

Query: 982  NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL--- 1038
             V+K  LP K   VI V+LS +QR LY  F++            + R +  +G+  L   
Sbjct: 563  TVLKAQLPFKEEHVILVRLSKIQRDLYTEFMN------------RFRDAGNSGWLGLNPL 610

Query: 1039 ------AQIWNHPGILQLTKDKGYPSRE---DAEDSSSD------------ENMDYNVVI 1077
                   +IWNHP +L     K   + E   D ED  ++            E      ++
Sbjct: 611  KAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEDLGTNNRCNAQSGKIKVEPNSLGALM 670

Query: 1078 GEKPRNMNDFLQG-------KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 1130
            GE        LQG       +  +     +W  ++L ++   +L  S KMVLL  ++   
Sbjct: 671  GETAHTKQ--LQGIVLNPSHEKANQVVTYEWAKEILSDYIPGQLQNSPKMVLLFHLIEES 728

Query: 1131 SNMGDKSLVFSQSIPTLDLIEFYLS--KLPRP----GKQGKLWKKGKDWYRLDGRTESSE 1184
              MGDK LVFSQS+ TL ++E +L+  K+P P    G++G  W +  ++YRLDG T +SE
Sbjct: 729  MRMGDKILVFSQSLSTLSIMEEFLAKRKMPIPAGSDGQEGHTWIRNVNYYRLDGSTSASE 788

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            R++L+ +FN+P N++V   L+STRAG LG+NL  ANRV++ D SWNP +D QA+ R +RY
Sbjct: 789  RERLINQFNDPSNEKVWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRY 848

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            GQ KP + YRL++  T+E+KIY RQ+TK+G++ RVVD        ++ E+ +L  F ++E
Sbjct: 849  GQRKPCYIYRLVSDFTLEKKIYDRQITKQGMSDRVVDDLNPEVNFTRREVENLLHFVEEE 908

Query: 1305 NPD 1307
             PD
Sbjct: 909  -PD 910


>gi|345307555|ref|XP_001506490.2| PREDICTED: helicase ARIP4 [Ornithorhynchus anatinus]
          Length = 1565

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/683 (38%), Positives = 384/683 (56%), Gaps = 79/683 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   IVN+     EE + +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 338  DALGQVIVNINHPPNEENIFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 396

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE--LKP 813
            ILAH+MGLGKT QVI+FL    R      +T L + PVN L NW  EF  W P+   L P
Sbjct: 397  ILAHSMGLGKTLQVISFLDVLFRHTEA--KTVLAIVPVNTLQNWLAEFNMWLPAPEALPP 454

Query: 814  -----------LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
                        +V +L D  +    RA+++A W  +GGV L+GY  +R LS  K     
Sbjct: 455  DNKSEIMQPRFFKVHILNDEHKTTAARAKVVADWVTEGGVLLMGYEMYRLLSLKKSFATG 514

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + + + + I  AL + GPD+++CDE H IKN  A T+QAL
Sbjct: 515  RKKKTKKPAGPVIIDLDEEDRQQELLKGIEKALARPGPDVVICDEGHRIKNCHASTSQAL 574

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 575  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 634

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR   +V+K  LP K   VI V+LS +QR LY  F++   
Sbjct: 635  DVRLMRYRSHVLHSLLEGFVQRRGHSVLKVQLPYKEEHVILVRLSKIQRALYTEFMNRF- 693

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  ++  +  +    +    +IWNHP +L     K   + E   D +D  +      
Sbjct: 694  --RDAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVDDLGTAGNNTR 751

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  D+L ++  
Sbjct: 752  CQSQGMKVKTESHTLGTSVGEA--TNSKFLQGVGFNPFQERANQVVTYEWAKDILCDYQT 809

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-----LPRPGKQG-K 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL +IE +L+K     LP    QG +
Sbjct: 810  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLSVIEEFLAKRSMPCLPDSDGQGIQ 869

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   +YRLDG T +SER++L+ +FN+P +  V   L+STRAG LG+NL  ANRV++ 
Sbjct: 870  NWVRNHSYYRLDGSTSASERERLINQFNDPSSSSVWLFLLSTRAGCLGVNLIGANRVVVF 929

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL++  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 930  DASWNPCHDAQAVCRVYRYGQKKPCHIYRLVSDFTLEKKIYDRQISKQGMSDRVVDDLNP 989

Query: 1286 HRTISKEEMLHLFEFGDDENPDP 1308
                ++ E+ +L  F ++E PDP
Sbjct: 990  MLNFTRREVENLLHFVEEE-PDP 1011


>gi|194743128|ref|XP_001954052.1| GF18082 [Drosophila ananassae]
 gi|190627089|gb|EDV42613.1| GF18082 [Drosophila ananassae]
          Length = 1314

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 268/759 (35%), Positives = 417/759 (54%), Gaps = 98/759 (12%)

Query: 608  SSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQV 667
            SS ESD ++  A N         ++K IR+I+   +L   TK     E++R++R++  Q 
Sbjct: 362  SSDESDGDDEKAKN---------KRKHIRKIIKTKDLDVSTKEAGKEEEDRRKRIEERQ- 411

Query: 668  QFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAH 727
                  KL N +          ++E     IT  +++   E  +  +++   +  KLK H
Sbjct: 412  ------KLYNRI-----FEKSENVE-----ITELVLDFDEESKKALLQVDKGLLKKLKPH 455

Query: 728  QVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRT 786
            QV G++FMW+   ++++  +    G GCILAH MGLGKT QV+   +T +  +    +  
Sbjct: 456  QVAGVKFMWDACFETLKDSQEK-AGSGCILAHCMGLGKTLQVVTLSHTLLINTRRTSVDR 514

Query: 787  ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFL 842
             L+++P++ ++NW +EF+ W   +    R   + D+SR +    R   L +W   GGV +
Sbjct: 515  VLVISPLSTVNNWAREFVHWM--KFANRRDIEVYDISRYKDKPTRIFKLNEWFTDGGVCI 572

Query: 843  IGYTAFRNLSFGKHVKDRNMARE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVK 900
            +GY  +R L+  K    R   RE +  AL D GPD++VCDE H++KN +   ++A+ +++
Sbjct: 573  LGYDMYRILANEKAKGLRKKQREQLQQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMR 632

Query: 901  CQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKI 960
             +RRI LTG+PLQNNL EYYCM+ FV+   LG+  E+ NRF NPI NGQ+T+ST  D+++
Sbjct: 633  TKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPISNGQYTDSTERDLRL 692

Query: 961  MNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTND 1020
            M  RSHIL++ L+G +QR D +V+   LPPK  +V+   LS LQ++LY  ++  H    D
Sbjct: 693  MKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTH---RD 749

Query: 1021 RVSNEKIRKS--FFAGYQALAQIWNHPGILQLTKDK---------------GYPSREDAE 1063
            + S++   K    F  +Q L +IW HP  L++  D                G+   E  E
Sbjct: 750  QASSDICGKGARLFQDFQDLRRIWTHPMNLRVNSDTVIAKRLLSNDDSDMDGFICDETDE 809

Query: 1064 DSS------------SDENMDYNVVIGEKPR---------NMNDF-----LQGKNDDGFF 1097
            D +            SD +M       +K +         N ND      + G +  G  
Sbjct: 810  DEAASNSSDSCDSFKSDASMSGLAASAQKSKKRKTRNDKANSNDSDSDVEMLGDSVAGAG 869

Query: 1098 QK------DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIE 1151
            QK      +WW   + E     + +S K+V+LL +L  C  +GDK LVFSQS+ +LD+IE
Sbjct: 870  QKEKDDPSEWWKPFVEERELNNVHHSPKLVILLRLLQQCEAIGDKLLVFSQSLQSLDVIE 929

Query: 1152 FYLSKLPRPGKQGKL----------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVK 1201
             +LS +    K  +           W  GKD++RLDG     +R+ + ++FN   N R +
Sbjct: 930  HFLSLVDSNTKNYEFEGDVGDFKGCWTIGKDYFRLDGSCSVEQREAMCKQFNNLTNLRAR 989

Query: 1202 CTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTM 1261
              LISTRAG LGINL +ANRV+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTM
Sbjct: 990  LFLISTRAGGLGINLTAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTM 1049

Query: 1262 EEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            E+K+Y+RQV K+  A RV+D QQ+ R  ++ +++ L+ +
Sbjct: 1050 EQKVYERQVAKQATAKRVIDEQQISRHYNQTDLMELYTY 1088


>gi|431913471|gb|ELK15146.1| Helicase ARIP4 [Pteropus alecto]
          Length = 1454

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 266/683 (38%), Positives = 384/683 (56%), Gaps = 79/683 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 230  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 288

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 289  ILAHSMGLGKTLQVISFVDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 346

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 347  DNKPEEIQPRFFKVHILNDEHKTTAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 406

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 407  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 466

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 467  KSIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 526

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 527  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSRIQRDLYTQFMDRF- 585

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 586  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 643

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      IGE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 644  CPSQGTKVKGEDSALASSIGEA--TNSRFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 701

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK---LPRPGKQG---K 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K    P PG +G   +
Sbjct: 702  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPPPPGAEGQGVQ 761

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 762  KWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 821

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 822  DASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLNP 881

Query: 1286 HRTISKEEMLHLFEFGDDENPDP 1308
                +++E+ +L  F + E P P
Sbjct: 882  MLNFTRKEVENLLHFVEKE-PAP 903


>gi|109039362|ref|XP_001096767.1| PREDICTED: helicase ARIP4 [Macaca mulatta]
          Length = 1467

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 274/729 (37%), Positives = 399/729 (54%), Gaps = 109/729 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFVDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL---------------------------- 1048
               D  S+  +  +    +    +IWNHP +L                            
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSTR 656

Query: 1049 ---QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK------ 1099
               Q TK KG    ED+  +SS         +GE     + FLQG   + F ++      
Sbjct: 657  CPPQGTKGKG----EDSPLASS---------VGEA--TNSKFLQGVGFNPFQERGNNIVT 701

Query: 1100 -DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-- 1156
             +W  DLL  +    L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  
Sbjct: 702  YEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRE 761

Query: 1157 LPRP----GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            +P P    G+  + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG L
Sbjct: 762  VPCPPGAEGQGAQKWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCL 821

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K
Sbjct: 822  GVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISK 881

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----L 1328
            +G++ RVVD        +++E+ +L  F + E P P  +++ +  + S     C     L
Sbjct: 882  QGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQVSLNIKGIKESVLQLACLKYPHL 940

Query: 1329 KHKLPLSHE 1337
              K P  HE
Sbjct: 941  ITKEPFEHE 949


>gi|348581979|ref|XP_003476754.1| PREDICTED: helicase ARIP4-like [Cavia porcellus]
          Length = 1467

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/716 (37%), Positives = 398/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSD----- 1068
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSVR 656

Query: 1069 --------ENMDYNVV--IGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                    +  D  +V  +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPPQGTKVKGEDSTLVSSVGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP------GKQGK 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K   P      G+  +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGIEGQGAQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N+     L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNVSYFRLDGSTPAFERERLITQFNDPSNRSTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAPQASLNIKGIKESVLQLACLKYPHLITKEPFEHE 949


>gi|326927740|ref|XP_003210048.1| PREDICTED: helicase ARIP4-like [Meleagris gallopavo]
          Length = 1470

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/678 (38%), Positives = 382/678 (56%), Gaps = 76/678 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   IVN+     EE + +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 250  DALGQVIVNINHPPNEEDIFLAPQLAHAVKPHQIGGIRFLYDNLVESLERFKTS-SGFGC 308

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ 809
            ILAH+MGLGKT QVI+FL    R      +T L + PVN L NW  EF  W P+      
Sbjct: 309  ILAHSMGLGKTIQVISFLDVLFRHTEA--KTVLAIVPVNTLQNWLAEFNMWLPAPENLPA 366

Query: 810  -----ELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
                 E++P   +V +L D  +    RA+++  W  +GGV L+GY  +R LS  K     
Sbjct: 367  DYNSKEVQPRTFKVHILNDEHKTTAARAKVVNDWVIEGGVLLMGYEMYRLLSLKKSFATG 426

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + + + + I  AL + GPD+++CDE H IKN  A T+QAL
Sbjct: 427  RKKKTKKQTGPVIIDLDEEDRQQELLKGIEKALSRPGPDVVICDEGHRIKNCHASTSQAL 486

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLGS  EF N F+ PI NGQ  +ST +
Sbjct: 487  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGSRQEFSNMFERPILNGQCIDSTPQ 546

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR   NV+K  LP K   VI V+LS +QR LY  F++   
Sbjct: 547  DVRLMRYRSHVLHSLLEGFVQRRGHNVLKVQLPSKEEHVILVRLSKIQRALYTEFMNRF- 605

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAED---SSSDEN 1070
               D  ++  +  +    +    +IWNHP +L     K   + E   D +D   +S++  
Sbjct: 606  --RDAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVDDLGTASTNSR 663

Query: 1071 MDYNVV------------IGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                 V            +GE     + FLQ    + F ++       +W  D+L ++  
Sbjct: 664  CQPQGVKVKTEGNALASPVGEA--TNSKFLQSVGFNPFQERANQVVTYEWAKDILCDYQT 721

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK----LW 1167
              L+ S KMVLL  ++     +GDK LVFSQS+ TL +IE +L+K P P   G      W
Sbjct: 722  GVLENSPKMVLLFHLVEESVKLGDKILVFSQSLSTLSVIEEFLAKRPMPSPPGSDGIHNW 781

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
             +   +YRLDG T +SER++L+ +FN+P N  V   L+STRAG LG+NL  ANRV++ D 
Sbjct: 782  VRNISYYRLDGSTSASERERLINQFNDPSNASVWLFLLSTRAGCLGVNLIGANRVVVFDA 841

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            SWNP +D QA+ R +RYGQ KP   YRL++  T+E+KIY RQ++K+G++ RVVD      
Sbjct: 842  SWNPCHDAQAVCRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDDLNPVL 901

Query: 1288 TISKEEMLHLFEFGDDEN 1305
              ++ E+ +L  F ++E+
Sbjct: 902  NFTRREVENLLHFVEEES 919


>gi|224065816|ref|XP_002190293.1| PREDICTED: helicase ARIP4 [Taeniopygia guttata]
          Length = 1473

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 264/683 (38%), Positives = 389/683 (56%), Gaps = 74/683 (10%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   IVN+     EE + +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 253  DALGQVIVNINHPPNEEDIFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTS-SGFGC 311

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ 809
            ILAH+MGLGKT QVI+FL    R      +T L + PVN L NW  EF  W P+      
Sbjct: 312  ILAHSMGLGKTIQVISFLDVLFRHTEA--KTVLAIVPVNTLQNWLAEFNMWLPAPENLPA 369

Query: 810  -----ELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
                 E++P   +V +L D  +    RA+++  W  +GGV L+GY  +R LS  K     
Sbjct: 370  DYNSKEVQPRTFKVHILNDEHKTTAARAKVVNDWVTEGGVLLMGYEMYRLLSLKKSFATG 429

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + + + + I  AL + GPD+++CDE H IKN  A T+QAL
Sbjct: 430  RKKRTKKQTGPVIIDLDEEDRQQELLKGIEKALSRPGPDVVICDEGHRIKNCHASTSQAL 489

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLGS  EF N F+ PI NGQ  +ST +
Sbjct: 490  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGSRQEFSNMFERPILNGQCIDSTPQ 549

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR   NV+K  LP K   VI V+LS +QR LY  F++   
Sbjct: 550  DVRLMRYRSHVLHSLLEGFVQRRGHNVLKVQLPSKEEHVILVRLSKIQRALYTEFMNRF- 608

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAED-SSSDEN-- 1070
               D  ++  +  +    +    +IWNHP +L     K   + E   D +D S+++ N  
Sbjct: 609  --RDAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVDDLSTANTNSR 666

Query: 1071 ---------MDYNVVIGEKPRNMND-FLQGKNDDGFFQK-------DWWNDLLHEHTYKE 1113
                      + N +        N  FLQ    + F ++       +W  D+L ++    
Sbjct: 667  CQPQGIKVKTESNALASPAGEATNSKFLQSVGFNPFQERANQVVTYEWAKDILCDYQTGV 726

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPR-PGKQGKL--WK 1168
            L+ S KMVLL  ++     +GDK LVFSQS+ TL +IE +L+K  +P  PG  G +  W 
Sbjct: 727  LENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLSVIEEFLAKRLMPSPPGSDGGVHNWV 786

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            +  ++YRLDG T +SER++L+ +FN+P N  V   L+STRAG LG+NL  ANRV++ D S
Sbjct: 787  RNINYYRLDGSTSASERERLINQFNDPSNASVWLFLLSTRAGCLGVNLIGANRVVVFDAS 846

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT 1288
            WNP +D QA+ R +RYGQ KP   YRL++  T+E+KIY RQ++K+G++ RVVD       
Sbjct: 847  WNPCHDAQAVCRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDDLNPVLN 906

Query: 1289 ISKEEMLHLFEF-GDDENPDPLT 1310
             ++ E+ +L  F G++ +P  L+
Sbjct: 907  FTRREVENLLHFVGEESDPAQLS 929


>gi|126336343|ref|XP_001367984.1| PREDICTED: helicase ARIP4 [Monodelphis domestica]
          Length = 1476

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/684 (38%), Positives = 384/684 (56%), Gaps = 80/684 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   IVN+     EE + +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 253  DALGQVIVNINHPPNEENIFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTS-SGFGC 311

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+FL    R      +T L + PVN L NW  EF  W         
Sbjct: 312  ILAHSMGLGKTLQVISFLDVLFRHTEA--KTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 369

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++  W ++GGV L+GY  +R LS  K     
Sbjct: 370  DYKPEEVQPRFFKVHILNDEHKTTAARAKVVTDWVSEGGVLLMGYEMYRLLSLKKSFATG 429

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + + + + I  AL + GPD+++CDE H IKN  A T+QAL
Sbjct: 430  RKKKTKKTACPVIIDLDEEDRQQELMKGIEKALSRPGPDVVICDEGHRIKNCHASTSQAL 489

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 490  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 549

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR   +V+K  LP K   VI V+LS +QR LY  F++   
Sbjct: 550  DVRLMRYRSHVLHSLLEGFVQRRGHSVLKIQLPYKEEHVILVRLSKIQRALYTEFMNRF- 608

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  ++  +  +    +    +IWNHP +L     K   + E   D +D S+      
Sbjct: 609  --RDAGNSGWLGLNPLKAFCVCCKIWNHPDVLHEALQKENLANEQDLDVDDLSTAGTNAR 666

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK--------DWWNDLLHEHT 1110
                      E        GE     + FLQG      FQ+        +W  D+L ++ 
Sbjct: 667  CQTQGIKVKTEGSTLAPSGGEA--TNSKFLQGVGGFNPFQERANQVVTYEWAKDILCDYQ 724

Query: 1111 YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP------GKQG 1164
               L+ S KMVLL  ++     +GDK LVFSQS+ TL +IE +L+K   P      G++ 
Sbjct: 725  TGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLSVIEEFLAKRLMPCLPSSDGQRD 784

Query: 1165 KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
            + W +   +YRLDG T +SER++L+ +FN+P N  V   L+STRAG LG+NL  ANRV++
Sbjct: 785  QNWVRNFSYYRLDGSTSASERERLINQFNDPNNSSVWLFLLSTRAGCLGVNLIGANRVVV 844

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
             D SWNP +D QA+ R +RYGQ KP   YRL++  T+E+KIY RQ++K+G++ RVVD   
Sbjct: 845  FDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDDLN 904

Query: 1285 VHRTISKEEMLHLFEFGDDENPDP 1308
                 ++ E+ +L  F ++E PDP
Sbjct: 905  PVLNFTRREVENLLHFVEEE-PDP 927


>gi|402859956|ref|XP_003894402.1| PREDICTED: helicase ARIP4 [Papio anubis]
 gi|355559594|gb|EHH16322.1| hypothetical protein EGK_11589 [Macaca mulatta]
 gi|383413111|gb|AFH29769.1| helicase ARIP4 [Macaca mulatta]
 gi|387540560|gb|AFJ70907.1| helicase ARIP4 [Macaca mulatta]
          Length = 1467

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/716 (37%), Positives = 397/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFVDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSTR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPPQGTKGKGEDSPLASSVGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGK 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P    G+  +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGAEGQGAQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAPQVSLNIKGIKESVLQLACLKYPHLITKEPFEHE 949


>gi|332216087|ref|XP_003257174.1| PREDICTED: helicase ARIP4 [Nomascus leucogenys]
          Length = 1467

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/716 (37%), Positives = 397/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSRIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPPQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGK 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P    G+  +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGAEGQGAQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEPFEHE 949


>gi|410331709|gb|JAA34801.1| RAD54-like 2 [Pan troglodytes]
          Length = 1467

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/716 (37%), Positives = 397/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPPQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGK 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P    G+  +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGAEGQGAQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEPFEHE 949


>gi|114587116|ref|XP_001169759.1| PREDICTED: helicase ARIP4 isoform 1 [Pan troglodytes]
 gi|397496017|ref|XP_003818840.1| PREDICTED: helicase ARIP4 [Pan paniscus]
 gi|410218888|gb|JAA06663.1| RAD54-like 2 [Pan troglodytes]
 gi|410308798|gb|JAA32999.1| RAD54-like 2 [Pan troglodytes]
          Length = 1467

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/716 (37%), Positives = 397/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPPQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGK 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P    G+  +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGAEGQGAQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEPFEHE 949


>gi|119585552|gb|EAW65148.1| hCG1997495, isoform CRA_d [Homo sapiens]
          Length = 1415

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/716 (37%), Positives = 397/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 191  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 249

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 250  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 307

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 308  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 367

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 368  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 427

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 428  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 487

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 488  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 546

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 547  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 604

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 605  CPPQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 662

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGK 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P    G+  +
Sbjct: 663  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQ 722

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 723  KWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 782

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 783  DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 842

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 843  MLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEPFEHE 897


>gi|20521664|dbj|BAA34529.2| KIAA0809 protein [Homo sapiens]
          Length = 1385

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 274/729 (37%), Positives = 399/729 (54%), Gaps = 109/729 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 161  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 219

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +  ++T L + PVN L NW  EF  W         
Sbjct: 220  ILAHSMGLGKTLQVISFIDVLFR--HTPVKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 277

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 278  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 337

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 338  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 397

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 398  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 457

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 458  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 516

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL---------------------------- 1048
               D  S+  +  +    +    +IWNHP +L                            
Sbjct: 517  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 574

Query: 1049 ---QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK------ 1099
               Q TK KG       EDS+   +M      GE     + FLQG   + F ++      
Sbjct: 575  CPPQGTKGKG-------EDSTLASSM------GEA--TNSKFLQGVGFNPFQERGNNIVT 619

Query: 1100 -DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-- 1156
             +W  DLL  +    L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  
Sbjct: 620  YEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRE 679

Query: 1157 LPRP----GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            +P P    G+  + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG L
Sbjct: 680  VPCPPGTEGQGAQKWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCL 739

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K
Sbjct: 740  GVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISK 799

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----L 1328
            +G++ RVVD        +++E+ +L  F + E P P  +++ +  + S     C     L
Sbjct: 800  QGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHL 858

Query: 1329 KHKLPLSHE 1337
              K P  HE
Sbjct: 859  ITKEPFEHE 867


>gi|168823443|ref|NP_055921.2| helicase ARIP4 [Homo sapiens]
 gi|296439458|sp|Q9Y4B4.4|ARIP4_HUMAN RecName: Full=Helicase ARIP4; AltName: Full=Androgen
            receptor-interacting protein 4; AltName: Full=RAD54-like
            protein 2
          Length = 1467

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/716 (37%), Positives = 397/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPPQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGK 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P    G+  +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEPFEHE 949


>gi|426340719|ref|XP_004034275.1| PREDICTED: helicase ARIP4 [Gorilla gorilla gorilla]
          Length = 1467

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/716 (37%), Positives = 397/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSRIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPPQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGK 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P    G+  +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGAEGQGAQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEPFEHE 949


>gi|355746669|gb|EHH51283.1| hypothetical protein EGM_10629 [Macaca fascicularis]
          Length = 1467

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 274/729 (37%), Positives = 399/729 (54%), Gaps = 109/729 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFVDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL---------------------------- 1048
               D  S+  +  +    +    +IWNHP +L                            
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSTR 656

Query: 1049 ---QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK------ 1099
               Q TK KG    ED+  +SS         +GE     + FLQG   + F ++      
Sbjct: 657  CPPQGTKGKG----EDSPLASS---------VGEA--TNSKFLQGVGFNPFQERGNNIVT 701

Query: 1100 -DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-- 1156
             +W  DLL  +    L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  
Sbjct: 702  YEWAKDLLTNYQTGVLENSPKMVLLFYLIEESVKLGDKILVFSQSLSTLALIEEFLGKRE 761

Query: 1157 LPRP----GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            +P P    G+  + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG L
Sbjct: 762  VPCPPGAEGQGAQKWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCL 821

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K
Sbjct: 822  GVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISK 881

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----L 1328
            +G++ RVVD        +++E+ +L  F + E P P  +++ +  + S     C     L
Sbjct: 882  QGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQVSLNIKGIKESVLQLACLKYPHL 940

Query: 1329 KHKLPLSHE 1337
              K P  HE
Sbjct: 941  ITKEPFEHE 949


>gi|391337402|ref|XP_003743058.1| PREDICTED: transcriptional regulator ATRX-like [Metaseiulus
            occidentalis]
          Length = 1561

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 268/740 (36%), Positives = 402/740 (54%), Gaps = 65/740 (8%)

Query: 616  NSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKL 675
            +SD+D   +  GK+K+K  IR+I+ D ++ +E++     E ER++R+   Q       KL
Sbjct: 478  DSDSDQEEEGDGKQKKKSFIRKIISDDKVEKESRAAAKEEAERRKRVLERQ-------KL 530

Query: 676  MNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFM 735
             N      ++ A    E   D +T  ++    E  E  V +  ++   +K HQV G++F+
Sbjct: 531  YN------EIEAAMQKERKTDKVTRCVLEYNAETKEPVVEVEEALVRHMKPHQVEGVKFL 584

Query: 736  WENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL--GLRTALIVTPV 793
            +  +I+S  +V     G G ILAH MGLGKTFQ I FLYT M    L    R  ++V P 
Sbjct: 585  YNTVIESTAQVIENKPGGGAILAHCMGLGKTFQTICFLYTLMTHELLRKHFRKVIVVCPC 644

Query: 794  NVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFR 849
            NV+ NW  EF  W    +       + + S+ +    R ++L  W  +GGV ++GY+ FR
Sbjct: 645  NVVLNWATEFEMWIDENVDVKHSLTIYEFSKVKNAFDRLDMLEDWYKEGGVLIMGYSMFR 704

Query: 850  NLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALT 908
             +S  K  K R +   I   L D G D++VCDE H +K+ +A  ++A+  ++ QRR+ LT
Sbjct: 705  LMSQNKS-KSRKIKDRIPKLLHDPGADLVVCDEGHTLKSDKAQISKAMNLIRTQRRLILT 763

Query: 909  GSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHIL 968
            G+PLQNN+ EY+CMV FV+   LG+  EF NRF NPI  GQ  NS    V++M +R+HIL
Sbjct: 764  GTPLQNNMSEYHCMVSFVKPNLLGTPKEFNNRFMNPITFGQQANSDHFAVRLMKKRAHIL 823

Query: 969  YEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIR 1028
             + L G V R D + +   LP K  ++I+++LS LQ+ LY+ +L   G T ++ + E +R
Sbjct: 824  NKLLAGCVHRCDYSHLTPYLPAKFEYIISIELSDLQKTLYREYLKHIGIT-EQTTREDLR 882

Query: 1029 -KSFFAGYQALAQIWNHPGILQLTKDKGYPSRE----------------DAEDSSSDENM 1071
             +S    YQ L  IW+HP +L  ++D+    R+                D E  +S    
Sbjct: 883  GRSLLKDYQVLKMIWSHPRLLLESEDRQEDKRQKEAYKNQMDDFVVEGSDEESGASQSGS 942

Query: 1072 ----------DYNVVIGEKPRNMNDFLQG-------KNDDGFFQKDWWNDLL--HEHTYK 1112
                      D  +V   K R       G       +N    +   WWN  +   E  + 
Sbjct: 943  GTSDDEAGGDDQEIVKTYKTRRNRKENPGDDSEPEEENTKKKYDSTWWNSHVPDDEDEFT 1002

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL-------SKLPRPGKQGK 1165
             L+ S K+ +  +IL  C  +GDK ++FS S+ TL+L E  L       +K    G    
Sbjct: 1003 SLELSSKLSIAFEILRECEPIGDKVILFSTSLLTLNLFENRLHVEAEKAAKDKSDGDYFN 1062

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W  G D++RLDG T    R+K +++FN+  N + +  L+STRAG +G N+  ANR+I++
Sbjct: 1063 TWVHGVDYFRLDGSTSVDTRKKYIDQFNDLSNMQARLFLVSTRAGGIGTNMVGANRIILL 1122

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP+ D QAI+RA+RYGQTKPV+ YRL+AH TMEEKIY RQV K  LA+RVVD Q +
Sbjct: 1123 DASWNPSDDTQAIFRAYRYGQTKPVYVYRLLAHATMEEKIYDRQVNKISLASRVVDEQNL 1182

Query: 1286 HRTISKEEMLHLFEFGDDEN 1305
             R  ++ ++  L+EF  ++N
Sbjct: 1183 ERHFNESDLKALYEFKPEKN 1202



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 75/191 (39%), Gaps = 29/191 (15%)

Query: 493 CTACNNVA----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVS 548
           CTACN          + H  L V+VCK C           D +  + YC WCG+  +L  
Sbjct: 19  CTACNGSIHHKRFPGYRHTALRVLVCKKCLDFYGSGSWSCDENGQDEYCRWCGQGGNLYI 78

Query: 549 C--KSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLK----------RLTSEL 596
           C    C + FC  C++RN   A +        W+C  C P  L+          R   EL
Sbjct: 79  CCNDECLSGFCNECIRRNFGSAEVDKVEDDDDWRCYLCEPKKLEDIQKWTETVFRFNEEL 138

Query: 597 GRAMGSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRI-LD--DAE--------LG 645
               G   + VS  E  + +S  D +         +K IR   LD  DAE        LG
Sbjct: 139 KAKQGV--VAVSRREKPAASSCEDESPTRSSFVDLRKAIRAAQLDTKDAEVRARIHILLG 196

Query: 646 EETKRKIAIEK 656
           E  KR + +EK
Sbjct: 197 EMKKRIVTVEK 207


>gi|291393761|ref|XP_002713270.1| PREDICTED: RAD54-like 2 [Oryctolagus cuniculus]
          Length = 1467

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/714 (37%), Positives = 398/714 (55%), Gaps = 79/714 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            D++   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DSLGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPETLPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEIQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RTKKSKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSDENMDY 1073
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSAR 656

Query: 1074 NVVIGEKPRNMND-------------FLQGKNDDGFFQK-------DWWNDLLHEHTYKE 1113
             +  G K +  ++             FLQG   + F ++       +W  DLL  +    
Sbjct: 657  CLPPGTKGKGEDNTLASSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQTGV 716

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---KLW 1167
            L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   + W
Sbjct: 717  LENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGAEGQGAQKW 776

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
             +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ D 
Sbjct: 777  VRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDA 836

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD      
Sbjct: 837  SWNPCHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPML 896

Query: 1288 TISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
              +++E+ +L  F + E P P T+++ +  + S     C     L  K P  HE
Sbjct: 897  NFTRKEVENLLHFVEKE-PAPQTSLNVKGIKESVLQLACLKYPHLITKEPFEHE 949


>gi|18999468|gb|AAH24298.1| RAD54-like 2 (S. cerevisiae) [Homo sapiens]
 gi|123982750|gb|ABM83116.1| RAD54-like 2 (S. cerevisiae) [synthetic construct]
 gi|123997421|gb|ABM86312.1| RAD54-like 2 (S. cerevisiae) [synthetic construct]
          Length = 1359

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 274/729 (37%), Positives = 397/729 (54%), Gaps = 109/729 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+    VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 135  DALGRVFVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 193

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 194  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 251

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 252  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 311

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 312  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 371

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 372  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 431

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 432  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 490

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL---------------------------- 1048
               D  S+  +  +    +    +IWNHP +L                            
Sbjct: 491  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 548

Query: 1049 ---QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK------ 1099
               Q TK KG       EDS+   +M      GE     + FLQG   + F ++      
Sbjct: 549  CPPQGTKGKG-------EDSTLASSM------GEA--TNSKFLQGVGFNPFQERGNNIVT 593

Query: 1100 -DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-- 1156
             +W  DLL  +    L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  
Sbjct: 594  YEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRE 653

Query: 1157 LPRP----GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            +P P    G+  + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG L
Sbjct: 654  VPCPPGTEGQGAQKWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCL 713

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K
Sbjct: 714  GVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISK 773

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----L 1328
            +G++ RVVD        +++E+ +L  F + E P P  +++ +  + S     C     L
Sbjct: 774  QGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHL 832

Query: 1329 KHKLPLSHE 1337
              K P  HE
Sbjct: 833  ITKEPFEHE 841


>gi|296225327|ref|XP_002758442.1| PREDICTED: helicase ARIP4 [Callithrix jacchus]
          Length = 1467

 Score =  451 bits (1161), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 272/729 (37%), Positives = 397/729 (54%), Gaps = 109/729 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            D +   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DTLGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL---------------------------- 1048
               D  ++  +  +    +    +IWNHP +L                            
Sbjct: 599  --RDCGTSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656

Query: 1049 ---QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK------ 1099
               Q TK KG       EDS+   +M      GE     + FLQG   + F ++      
Sbjct: 657  CPTQGTKGKG-------EDSTLASSM------GEA--TNSKFLQGVGFNPFQERGNNIVT 701

Query: 1100 -DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-- 1156
             +W  DLL  +    L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  
Sbjct: 702  YEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRE 761

Query: 1157 LPRP----GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            +P P    G+  + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG L
Sbjct: 762  VPSPPGAEGQGAQKWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCL 821

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K
Sbjct: 822  GVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISK 881

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----L 1328
            +G++ RVVD        +++E+ +L  F + E P P  +++ +  + S     C     L
Sbjct: 882  QGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQVSLNIKGIKESVLQLACLKYPHL 940

Query: 1329 KHKLPLSHE 1337
              K P  HE
Sbjct: 941  ITKEPFEHE 949


>gi|344276661|ref|XP_003410126.1| PREDICTED: helicase ARIP4 [Loxodonta africana]
          Length = 1467

 Score =  451 bits (1161), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 275/729 (37%), Positives = 400/729 (54%), Gaps = 109/729 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL---------------------------- 1048
               D  S+  +  +    +    +IWNHP +L                            
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSTR 656

Query: 1049 ---QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK------ 1099
               Q TK+KG    ED+  +SS         +GE     + FLQG     F ++      
Sbjct: 657  CPSQGTKNKG----EDSALASS---------MGEA--TNSKFLQGVGFSPFQERGNNIVT 701

Query: 1100 -DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-- 1156
             +W  DLL  +    L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  
Sbjct: 702  YEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRE 761

Query: 1157 LPR-PGKQG---KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            +P  PG +G   + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG L
Sbjct: 762  VPYLPGAEGQGAQKWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCL 821

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K
Sbjct: 822  GVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISK 881

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----L 1328
            +G++ RVVD        +++E+ +L  F + E P P ++++ +  + S     C     L
Sbjct: 882  QGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQSSLNIKGIKESVLQLACLKYPHL 940

Query: 1329 KHKLPLSHE 1337
              K P  HE
Sbjct: 941  ITKEPFEHE 949


>gi|426249473|ref|XP_004018474.1| PREDICTED: helicase ARIP4 isoform 1 [Ovis aries]
          Length = 1467

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 266/688 (38%), Positives = 388/688 (56%), Gaps = 79/688 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 244  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 302

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 303  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 360

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 361  DSKPEEVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 420

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 421  RPKKAKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 480

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 481  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 540

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY  F+D   
Sbjct: 541  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTHFMDRF- 599

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSD----- 1068
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 600  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSAR 657

Query: 1069 ----------ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 658  CPSQGTRGKVEDSALASSVGEA--TNSKFLQGVGFNPFQERGNSIVTYEWAKDLLTNYQT 715

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---K 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   +
Sbjct: 716  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGAEGQGVQ 775

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 776  KWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 835

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 836  DASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLNP 895

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVS 1313
                +++E+ +L  F + E P P T+++
Sbjct: 896  MLNFTRKEVENLLHFVEKE-PAPQTSLN 922


>gi|395832709|ref|XP_003789399.1| PREDICTED: helicase ARIP4 isoform 1 [Otolemur garnettii]
          Length = 1467

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 272/716 (37%), Positives = 397/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLAQVVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFTTG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKFHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPPQGTKGKGEDNTVASPVGEA--TNSKFLQGVGFNPFQERGNNIITYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---K 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLEKREVPCLPGAEGQGAQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEPFEHE 949


>gi|148689217|gb|EDL21164.1| Rad54 like 2 (S. cerevisiae) [Mus musculus]
          Length = 1466

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 272/714 (38%), Positives = 397/714 (55%), Gaps = 79/714 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 242  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 300

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 301  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 358

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA++ A W ++GGV L+GY  +R L+  K +   
Sbjct: 359  DSKPEEVQPRFFKVHILNDEHKTVASRAKVTADWVSEGGVLLMGYEMYRLLTLKKSLATS 418

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 419  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 478

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 479  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 538

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 539  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMDRF- 597

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSDENMDY 1073
               D  ++  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 598  --RDCGTSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSAR 655

Query: 1074 NVVIGEK--------PRNMND-----FLQGKNDDGFFQK-------DWWNDLLHEHTYKE 1113
                G K        P +M +     FLQG   + F ++       +W  +LL  +    
Sbjct: 656  CPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKELLTNYQTGV 715

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---KLW 1167
            L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   + W
Sbjct: 716  LENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPGAEGQGTQKW 775

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
             +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ D 
Sbjct: 776  VRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDA 835

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD      
Sbjct: 836  SWNPCHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPML 895

Query: 1288 TISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
              +++E+ +L  F + E P P T++  +  + S     C     L  K P  HE
Sbjct: 896  NFTRKEVENLLHFVEKE-PAPQTSLDIKGIKESVLQLACLKYPHLITKEPFEHE 948


>gi|126090612|ref|NP_109655.2| helicase ARIP4 [Mus musculus]
          Length = 1467

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 272/714 (38%), Positives = 397/714 (55%), Gaps = 79/714 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA++ A W ++GGV L+GY  +R L+  K +   
Sbjct: 360  DSKPEEVQPRFFKVHILNDEHKTVASRAKVTADWVSEGGVLLMGYEMYRLLTLKKSLATS 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSDENMDY 1073
               D  ++  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGTSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSAR 656

Query: 1074 NVVIGEK--------PRNMND-----FLQGKNDDGFFQK-------DWWNDLLHEHTYKE 1113
                G K        P +M +     FLQG   + F ++       +W  +LL  +    
Sbjct: 657  CPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKELLTNYQTGV 716

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---KLW 1167
            L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   + W
Sbjct: 717  LENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPGAEGQGTQKW 776

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
             +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ D 
Sbjct: 777  VRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDA 836

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD      
Sbjct: 837  SWNPCHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPML 896

Query: 1288 TISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
              +++E+ +L  F + E P P T++  +  + S     C     L  K P  HE
Sbjct: 897  NFTRKEVENLLHFVEKE-PAPQTSLDIKGIKESVLQLACLKYPHLITKEPFEHE 949


>gi|354476447|ref|XP_003500436.1| PREDICTED: helicase ARIP4 [Cricetulus griseus]
 gi|344252783|gb|EGW08887.1| Helicase ARIP4 [Cricetulus griseus]
          Length = 1467

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 273/716 (38%), Positives = 396/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 242  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 300

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 301  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 358

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA++ A W ++GGV L+GY  +R L+  K     
Sbjct: 359  DSKPEEVQPRFFKVHILNDEHKTVASRAKVTADWVSEGGVLLMGYEMYRLLTLKKSFATG 418

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 419  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 478

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 479  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 538

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 539  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMDRF- 597

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 598  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSSR 655

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 656  CPPQGTKVKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 713

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---K 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   +
Sbjct: 714  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDVPCLPGAEGQGAQ 773

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 774  KWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 833

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 834  DASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 893

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P T++  +  + S     C     L  K P  HE
Sbjct: 894  MLNFTRKEVENLLHFVEKE-PAPQTSLDIKGIKESVLQLACLKYPHLITKEPFEHE 948


>gi|410951279|ref|XP_003982325.1| PREDICTED: helicase ARIP4 [Felis catus]
          Length = 1467

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/683 (38%), Positives = 383/683 (56%), Gaps = 79/683 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RSKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPSQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-----LPRPGKQG-K 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K     LP    QG +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGADGQGVQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDP 1308
                +++E+ +L  F + E P P
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAP 916


>gi|81916664|sp|Q99NG0.1|ARIP4_MOUSE RecName: Full=Helicase ARIP4; AltName: Full=Androgen
            receptor-interacting protein 4; AltName: Full=RAD54-like
            protein 2; AltName: Full=Steroid receptor-interacting
            SNF2 domain-containing protein-like
 gi|12331285|emb|CAC24703.1| steroid receptor-interacting SNF2 domain protein [Mus musculus]
 gi|126631448|gb|AAI33715.1| RAD54 like 2 (S. cerevisiae) [Mus musculus]
          Length = 1466

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 272/714 (38%), Positives = 397/714 (55%), Gaps = 79/714 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 242  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 300

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 301  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 358

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA++ A W ++GGV L+GY  +R L+  K +   
Sbjct: 359  DSKPEEVQPRFFKVHILNDEHKTVASRAKVTADWVSEGGVLLMGYEMYRLLTLKKSLATS 418

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 419  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 478

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 479  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 538

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 539  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMDRF- 597

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSDENMDY 1073
               D  ++  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 598  --RDCGTSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSAR 655

Query: 1074 NVVIGEK--------PRNMND-----FLQGKNDDGFFQK-------DWWNDLLHEHTYKE 1113
                G K        P +M +     FLQG   + F ++       +W  +LL  +    
Sbjct: 656  CPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKELLTNYQTGV 715

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---KLW 1167
            L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   + W
Sbjct: 716  LENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPGAEGQGTQKW 775

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
             +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ D 
Sbjct: 776  VRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDA 835

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD      
Sbjct: 836  SWNPCHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPML 895

Query: 1288 TISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
              +++E+ +L  F + E P P T++  +  + S     C     L  K P  HE
Sbjct: 896  NFTRKEVENLLHFVEKE-PAPQTSLDIKGIKESVLQLACLKYPHLITKEPFEHE 948


>gi|74137993|dbj|BAE25404.1| unnamed protein product [Mus musculus]
          Length = 1434

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 272/714 (38%), Positives = 397/714 (55%), Gaps = 79/714 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 210  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 268

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 269  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 326

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA++ A W ++GGV L+GY  +R L+  K +   
Sbjct: 327  DSKPEEVQPRFFKVHILNDEHKTVASRAKVTADWVSEGGVLLMGYEMYRLLTLKKSLATS 386

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 387  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 446

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 447  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 506

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 507  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMDRF- 565

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSDENMDY 1073
               D  ++  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 566  --RDCGTSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSAR 623

Query: 1074 NVVIGEK--------PRNMND-----FLQGKNDDGFFQK-------DWWNDLLHEHTYKE 1113
                G K        P +M +     FLQG   + F ++       +W  +LL  +    
Sbjct: 624  CPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKELLTNYQTGV 683

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---KLW 1167
            L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   + W
Sbjct: 684  LENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPGAEGQGTQKW 743

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
             +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ D 
Sbjct: 744  VRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDA 803

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD      
Sbjct: 804  SWNPCHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPML 863

Query: 1288 TISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
              +++E+ +L  F + E P P T++  +  + S     C     L  K P  HE
Sbjct: 864  NFTRKEVENLLHFVEKE-PAPQTSLDIKGIKESVLQLACLKYPHLITKEPFEHE 916


>gi|403291152|ref|XP_003936663.1| PREDICTED: helicase ARIP4 [Saimiri boliviensis boliviensis]
          Length = 1662

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 270/716 (37%), Positives = 397/716 (55%), Gaps = 83/716 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            D +   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DTLGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  ++  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGTSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPPQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---K 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGAEGQGAQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
                +++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAPQVSLNIKGIKESVLQLACLKYPHLITKEPFEHE 949


>gi|359322201|ref|XP_003639804.1| PREDICTED: helicase ARIP4 isoform 2 [Canis lupus familiaris]
          Length = 1467

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/683 (38%), Positives = 383/683 (56%), Gaps = 79/683 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RSKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPSQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-----LPRPGKQG-K 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K     LP    QG +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGADGQGVQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDP 1308
                +++E+ +L  F + E P P
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAP 916


>gi|432092450|gb|ELK25065.1| Helicase ARIP4 [Myotis davidii]
          Length = 957

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/683 (38%), Positives = 385/683 (56%), Gaps = 79/683 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSS-GFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFVDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DSKPEEVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKRSKKRSHPVIIDLDEEDRQQEFRREFEKALSRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSAR 656

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 657  CPSQGTKVKGEDSALAASMGEAAN--SKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---K 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   +
Sbjct: 715  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPGAEGQGVQ 774

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 775  KWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 835  DASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLNP 894

Query: 1286 HRTISKEEMLHLFEFGDDENPDP 1308
                +++E+ +L  F + E P P
Sbjct: 895  MLNFTRKEVENLLHFVEKE-PAP 916


>gi|47211649|emb|CAF94986.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1320

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/706 (36%), Positives = 385/706 (54%), Gaps = 102/706 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA    +VN+     EE + +   ++  +K HQ+ GIRF+++N+I+S+ +      G GC
Sbjct: 307  DAQGRVLVNLNHPSEEEDIFLLPQLARAVKPHQIGGIRFLYDNLIESVERF-GNSSGFGC 365

Query: 756  ILAHTMGLGKTFQVIAFL---------------------------YTAMRSVNLGLR--- 785
            ILAH+MGLGKT QVI+F+                           ++++    LG++   
Sbjct: 366  ILAHSMGLGKTLQVISFIDVLFRHTQAHTVLAIVPVSPRLSCGDEWSSLSHTKLGIKYRS 425

Query: 786  ----TALIVTPVNVLHNWKQEFMKWRPSE--LKP-----------LRVFMLEDVSRD--R 826
                 ++I + VN L NW  EF  W P+   L+P            +V +L D  ++   
Sbjct: 426  EDSVMSVISSQVNTLQNWLSEFNMWVPAPEALRPDTAAGPITPRTFKVHILNDEHKNTAS 485

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKH------------------VKDRNMAREICH 868
            RA+++ +W   GGV L+GY  +R LS  K                   V + +  +E+  
Sbjct: 486  RAKVVEEWARDGGVLLMGYEMYRLLSLKKSYVAGRKKSKKAMGPVVIDVDEEDRQQELLK 545

Query: 869  ALQD-----GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMV 923
             +++     GPD+++CDE H IKN  A T+QALK +K +RR+ LTG PLQNNL+EY+CMV
Sbjct: 546  GIEEALARPGPDVVICDEGHRIKNCHASTSQALKNIKTRRRVVLTGYPLQNNLIEYWCMV 605

Query: 924  DFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV 983
            DFVR  FLG   EF N F+ PI NGQ  +ST ED+++M  RSH+L+  L+GFVQR   +V
Sbjct: 606  DFVRPDFLGKRQEFSNMFERPILNGQCVDSTPEDIRLMRYRSHVLHSLLEGFVQRRGHDV 665

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
            +K  LPPK   V+ V+LSPLQR LY  F++  GF   R +   +  +    +    +IWN
Sbjct: 666  LKDQLPPKQEHVLLVRLSPLQRALYTEFMN--GFREPR-NTGWLSLNPLKAFCVCCKIWN 722

Query: 1044 HPGIL-------QLTKDK---------GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDF 1087
            HP +L        L  D+           P+R     +   + +     +GE   ++N  
Sbjct: 723  HPDVLFEALQKENLANDQDLDLEDITTAGPTRSPTAPNQKSKPLKNPFSMGE--LSLNQL 780

Query: 1088 LQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
             +  N       +W  +++ ++    L+ S KMVLL  ++      GDK LVFSQS+ TL
Sbjct: 781  QEKANQ--VITYEWAKEIMSDYNPSILENSAKMVLLFHLIEESVRKGDKLLVFSQSLSTL 838

Query: 1148 DLIEFYLSKLPRPG-----KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKC 1202
             +IE +L K P P      K  + W +  ++YRLDG T +SER++L+ +FN+P N  V  
Sbjct: 839  TVIENFLVKRPVPPSPQKDKPNQNWVRNVNYYRLDGSTTASERERLINQFNDPSNTSVWV 898

Query: 1203 TLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTME 1262
             L+STRAG LG+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP   YRL+   T+E
Sbjct: 899  FLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQRKPCHIYRLVCDFTLE 958

Query: 1263 EKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            +KIY RQ++K+G++ RVVD Q    T +K E+  L  F ++E PDP
Sbjct: 959  KKIYDRQISKQGMSDRVVDDQNPVLTFTKREVESLLHFVEEE-PDP 1003


>gi|281338061|gb|EFB13645.1| hypothetical protein PANDA_007611 [Ailuropoda melanoleuca]
          Length = 1424

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/683 (38%), Positives = 383/683 (56%), Gaps = 79/683 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 200  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 258

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 259  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 316

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 317  DNKPEEVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 376

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 377  RSKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 436

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 437  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 496

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 497  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 555

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 556  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 613

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 614  CPSQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 671

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-----LPRPGKQG-K 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K     LP    QG +
Sbjct: 672  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGADGQGVQ 731

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 732  KWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 791

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 792  DASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLNP 851

Query: 1286 HRTISKEEMLHLFEFGDDENPDP 1308
                +++E+ +L  F + E P P
Sbjct: 852  MLNFTRKEVENLLHFVEKE-PAP 873


>gi|301767248|ref|XP_002919008.1| PREDICTED: helicase ARIP4-like [Ailuropoda melanoleuca]
          Length = 1465

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/683 (38%), Positives = 383/683 (56%), Gaps = 79/683 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 241  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 299

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 300  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 357

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 358  DNKPEEVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 417

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 418  RSKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 477

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 478  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 537

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 538  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 596

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 1067
               D  S+  +  +    +    +IWNHP +L     K   + E   D E+  S      
Sbjct: 597  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 654

Query: 1068 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 1111
                      E+      +GE     + FLQG   + F ++       +W  DLL  +  
Sbjct: 655  CPSQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 712

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-----LPRPGKQG-K 1165
              L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K     LP    QG +
Sbjct: 713  GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGADGQGVQ 772

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 773  KWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 832

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD    
Sbjct: 833  DASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLNP 892

Query: 1286 HRTISKEEMLHLFEFGDDENPDP 1308
                +++E+ +L  F + E P P
Sbjct: 893  MLNFTRKEVENLLHFVEKE-PAP 914


>gi|338714799|ref|XP_001495142.3| PREDICTED: LOW QUALITY PROTEIN: helicase ARIP4 [Equus caballus]
          Length = 1467

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 268/696 (38%), Positives = 387/696 (55%), Gaps = 105/696 (15%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHXSEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL---------------------------- 1048
               D  S+  +  +    +    +IWNHP +L                            
Sbjct: 599  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656

Query: 1049 ---QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK------ 1099
               Q TK KG    ED+  +SS         +GE     + FLQG   + F ++      
Sbjct: 657  CPSQGTKGKG----EDSALASS---------MGEA--TNSKFLQGVGFNPFQERGNNIVT 701

Query: 1100 -DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-- 1156
             +W  DLL  +    L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  
Sbjct: 702  YEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRE 761

Query: 1157 LP-RPGKQG---KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            +P  PG +G   + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG L
Sbjct: 762  VPCLPGAEGQGVQKWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCL 821

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K
Sbjct: 822  GVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISK 881

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            +G++ RVVD        +++E+ +L  F + E P P
Sbjct: 882  QGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAP 916


>gi|410919739|ref|XP_003973341.1| PREDICTED: helicase ARIP4-like [Takifugu rubripes]
          Length = 1481

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/699 (36%), Positives = 383/699 (54%), Gaps = 103/699 (14%)

Query: 686  SAGASIE---VLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQS 742
            S+GA I     L DA    +VN+     E+ + +   ++  +K HQ+ GIRF+++N+++S
Sbjct: 255  SSGAHINDALNLPDAHGRVLVNINHPAEEKDLYLAPQLARAVKPHQIGGIRFLYDNLVES 314

Query: 743  IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQE 802
            + + K+   G GCILAH+MGLGKT QVI+F+   MR  N    T L + PVN + NW  E
Sbjct: 315  LERYKT-SSGFGCILAHSMGLGKTLQVISFIDVLMR--NTETHTVLAIVPVNTIQNWLTE 371

Query: 803  FMKWRPSE--LKP-----------LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTA 847
            F  W P++  L P             V +L D  +    RA+++  W   GGV L+GY  
Sbjct: 372  FNLWLPAQESLPPETDPTVITGRSFNVHVLNDEHKTTLARAKVVEDWSRDGGVLLMGYEM 431

Query: 848  FRNLSFGKHV-----------------------KDRNMAREICHAL-QDGPDILVCDEAH 883
            +R L+  K                         + + + + I  A+ + GPD+++CDE H
Sbjct: 432  YRLLTMKKSFVMGKRRKSKKPTGPVIIDLDEEDRQQELMKGIERAIARPGPDVVICDEGH 491

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
             IKN  A T+QALK ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ 
Sbjct: 492  RIKNYHASTSQALKNIRSRRRVVLTGYPLQNNLLEYWCMVDFVRPDFLGTRQEFSNMFER 551

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            PI NGQ  +ST +DV++M  RSH+L+  L+GFVQR   +V++  LP K   VI V+LSP+
Sbjct: 552  PILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHDVLRDQLPSKQEHVILVRLSPI 611

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL---------AQIWNHPGILQLTKDK 1054
            QR LY  F+            ++ R++   G+  L          +IWNHP +L     K
Sbjct: 612  QRALYTEFM------------KRFREAGNTGWLGLNPLKAFCVCCKIWNHPDVLYEALQK 659

Query: 1055 GYPSREDAEDSSSDENMDY-NVVIGEKPR----------NMNDFLQGKND---------- 1093
                    E+ ++++++D  ++     PR           + D    KN+          
Sbjct: 660  --------ENQANEQDLDLDDITSAGNPRCPAPGSGLKAKVADPCNSKNNTTLPINHTQD 711

Query: 1094 --DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIE 1151
              +     +W  D++  +    L+ S KMVLL  ++       DK LVFSQS+ TL +IE
Sbjct: 712  RANQVITYEWAKDIMSSYHMGILENSAKMVLLFHLIEESVKKRDKLLVFSQSLSTLTVIE 771

Query: 1152 FYLSKLPRPG------KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
             +LSK P P        + + W +  ++YRLDG T +SER++L+ +FN+P NK     L+
Sbjct: 772  DFLSKRPMPSGIASSEPRSQNWVRNLNYYRLDGSTSASERERLINQFNDPENKAAWVFLL 831

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            STRAG LG+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP F YRL+   T+E+KI
Sbjct: 832  STRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQRKPCFIYRLVCDFTLEKKI 891

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            Y RQV+K+G++ RVVD        +++E+  L  F ++E
Sbjct: 892  YDRQVSKQGMSDRVVDDLNPGLNFTRKEVESLLHFVEEE 930


>gi|345489210|ref|XP_001603130.2| PREDICTED: transcriptional regulator ATRX homolog [Nasonia
            vitripennis]
          Length = 1184

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 264/732 (36%), Positives = 400/732 (54%), Gaps = 78/732 (10%)

Query: 606  IVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERL--- 662
            I+++SE     S+A    K  G+R     IR++  D E+ E T+R    E+ R +RL   
Sbjct: 411  ILTNSEEKVVVSNAVTPSKPAGRRN----IRKVFHDEEVAEGTRRAGKDEENRLQRLAER 466

Query: 663  -KSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSIS 721
             K LQ   + K+K  +++ LD D+                      +K  + +++   + 
Sbjct: 467  KKQLQELLTEKNKEKDTLVLDFDI----------------------DKKVDLIKVDRGLV 504

Query: 722  AKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVN 781
              LK HQ  G++FMWE+  +++ +VK+ + G GCILAH MGLGKTFQ++  ++T + + +
Sbjct: 505  KFLKPHQAEGVKFMWESCFETLEQVKNSE-GSGCILAHCMGLGKTFQIVTLVHTILVNRD 563

Query: 782  LGLRTALIVTPVNVLHNWKQEFMKW--RPSELKPLRVFMLEDVSR-DRRAELLAKWRAKG 838
             G+ T ++V P+N + NW +EF  W       K +RV+ L  + +   R   L  W   G
Sbjct: 564  TGVNTVMVVCPMNTILNWVEEFDMWLKHAENNKRIRVYDLTQIKKTSSRISQLKFWHDLG 623

Query: 839  GVFLIGYTAFRNLSFGKHVKDRNMAREI---CHALQDGPDILVCDEAHMIKNTRADTTQA 895
            GV ++ Y  FR   F    K +++ R      + L  G D +VCDE H++KN  +   + 
Sbjct: 624  GVLVLSYEMFR--LFTSDDKKQSLQRSQKMRSYLLNPGADFVVCDEGHLLKNEGSQIAKR 681

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            ++ V+ +RR+ LTG+PLQNNL EY+CMV FV+   LG+  EF NRF NPI NGQ  NST+
Sbjct: 682  MQCVRTKRRVILTGTPLQNNLSEYHCMVQFVKPNLLGNKIEFLNRFGNPIVNGQFDNSTA 741

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
            +DVK+M  R+H+L+  L+G VQR D  V+   LPPK  +VI ++LS LQ  +Y+ F++  
Sbjct: 742  KDVKLMKHRAHVLHRMLEGCVQRCDYAVLTPFLPPKQEYVILLRLSELQIEMYRFFIENI 801

Query: 1016 GFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNV 1075
                 R   +  R   F  Y  + ++  HP  +QL       + +  +++ +        
Sbjct: 802  A----RADAKHCR--LFKNYHEIKRLIAHPTNMQLQAKANQKNNKSNKNNKA-------- 847

Query: 1076 VIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGD 1135
               +  RN  DF Q +      ++ WW+  + +    +   S K++ L  IL  C   GD
Sbjct: 848  ---KNLRN-GDFSQAE------EEYWWSRFVKDDQRFDFTQSYKLIFLYGILERCKKEGD 897

Query: 1136 KSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL----------WKKGKDWYRLDGRTESSER 1185
            K L+FSQ + TLDLIE +L  +    KQ             WK+G D++R+DG   S +R
Sbjct: 898  KILLFSQCLNTLDLIEIFLKHIDSQSKQNGFTNDLFNFQDEWKRGLDYFRMDGSVNSEKR 957

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
              + + FN P NKR +  LISTRAG LGINL  ANRV+I D SWNP+ DLQ+I+R +R+G
Sbjct: 958  NSMCKTFNNPNNKRARLFLISTRAGGLGINLIGANRVVIFDPSWNPSNDLQSIFRIFRFG 1017

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLF--EFGDD 1303
            Q+KP + YR ++ GTME+KIY RQVTK  L+ RV+D  Q+ R     E+  L+  E  DD
Sbjct: 1018 QSKPCYIYRFLSAGTMEQKIYNRQVTKLSLSLRVLDEHQIERHYRDTELAELYKLETLDD 1077

Query: 1304 ENPDPLTAVSKE 1315
            +   P+  V K+
Sbjct: 1078 Q---PILNVPKD 1086


>gi|260809914|ref|XP_002599749.1| hypothetical protein BRAFLDRAFT_205765 [Branchiostoma floridae]
 gi|229285031|gb|EEN55761.1| hypothetical protein BRAFLDRAFT_205765 [Branchiostoma floridae]
          Length = 1002

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/690 (37%), Positives = 369/690 (53%), Gaps = 107/690 (15%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   ++NV     E  + +   +   +K HQ+ GIRF+++N+++S+ + KS   G GC
Sbjct: 142  DALGKVLINVNHPSTESDIFLSPQLGRSVKPHQIGGIRFLYDNLVESLERYKSSG-GFGC 200

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ 809
            ILAH+MGLGKT Q+I+F+   +R      +T L + P+N L NW  EF  W P+      
Sbjct: 201  ILAHSMGLGKTLQLISFIDVFLRHTEA--KTVLCIVPINTLQNWSAEFNMWLPTKEAVDT 258

Query: 810  ------------ELKPLRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNL---- 851
                        + +   V++L D  R    RA+L+ KW   GGV L+GY  +R L    
Sbjct: 259  AIQQGIAQEGEIQHREFGVYLLNDNYRTNLARAKLIDKWFKTGGVLLMGYEMYRLLISKK 318

Query: 852  --------SFGKHVKD----------RNMAREICHAL-----QDGPDILVCDEAHMIKNT 888
                      GK  KD           N+A  I H +     + GPD+++CDE H IKN 
Sbjct: 319  IMLTNNKKRRGKQPKDMEVIDLEEEDTNLA--ILHGVYKALAKPGPDLVICDEGHRIKNA 376

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
                +Q LK ++ +RR+ LTG PLQNNLMEY+CMVDFVR  FLG+  EF N F+ PI+NG
Sbjct: 377  HTSVSQTLKNIRTKRRVVLTGYPLQNNLMEYWCMVDFVRPNFLGTRQEFSNMFERPIQNG 436

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            Q  +ST EDV+ M  R+H+L+  L+GFVQR    V+K  LPPK   V+ V++S +QR LY
Sbjct: 437  QCIDSTPEDVRYMRYRAHVLHSLLEGFVQRRGHAVLKSVLPPKYEHVLLVRMSAIQRELY 496

Query: 1009 KRFLDLH------GFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL------QLTKD--- 1053
             +F+         G++N    N  +R      +    +IWNHP IL      ++T D   
Sbjct: 497  AKFMTAFREAGAAGWSN----NNPLR-----AFSVCCKIWNHPDILYEILQKKMTNDDLD 547

Query: 1054 ---------KG-----YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK 1099
                     KG      P+  D   SS D     +V +       N   QG N       
Sbjct: 548  IEDPEGLGNKGSSRSNTPTIPDGNSSSKDRRFTQDVGLTPFQEKAN---QGTN------Y 598

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            +W  D + ++T   L+  GKM+LL  I+      GDK LV+SQS+ TL LIE +L+K P 
Sbjct: 599  NWAEDCMKDYTPGVLENGGKMLLLFKIIEQSIRGGDKLLVYSQSLNTLSLIEEFLAKTPM 658

Query: 1160 PGKQGKL-------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            P             W K K +YRLDG T   +R+K++ +FN P N      L+STRAG L
Sbjct: 659  PEPPNGFPHNIPLRWAKNKTYYRLDGGTSGQDREKMINQFNVP-NSPTWLFLLSTRAGCL 717

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANRV++ D SWNP +D QA+ R +RYGQTKP   YRL+   ++E+KIY RQV K
Sbjct: 718  GVNLVGANRVVVFDASWNPCHDCQAVCRVYRYGQTKPCHIYRLVTDKSLEKKIYDRQVNK 777

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGD 1302
            +G++ RVVD  Q     +++E+  LF + D
Sbjct: 778  QGMSDRVVDELQPESNFTRKEVEDLFMYED 807


>gi|167535565|ref|XP_001749456.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772084|gb|EDQ85741.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1326

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 261/637 (40%), Positives = 361/637 (56%), Gaps = 49/637 (7%)

Query: 695  GDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLG 754
            GD + G  VN+ + + EE VR+   I+A LK HQ+ G+RFMWENI+  + + +  DK  G
Sbjct: 383  GD-LQGVQVNINKPEHEEVVRLAPEIAALLKPHQIGGVRFMWENIVGRL-EYQGDDKAFG 440

Query: 755  CILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPL 814
            CILAH MGLGKT QV+ F    +R+     + A+I+TPVN L NW+ EF KW      P 
Sbjct: 441  CILAHAMGLGKTLQVVTFTEVFLRAT--PGKYAIIITPVNTLGNWENEFHKWLTRSSMP- 497

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA----------- 863
             +F +       R +++  WR  GGV L+GY   R    G   K +              
Sbjct: 498  NIFPVNARKMAERRKIVMDWRKAGGVLLVGYEMMRKFFVGDEFKVKKRRSDFRAPAAPTV 557

Query: 864  ---REICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 919
               +E+ HAL D GPD+++CDE H IKN +    Q LK+ K  RR+ LTGSPLQNNL EY
Sbjct: 558  DEDKEMIHALLDPGPDLVICDEGHRIKNDKTAINQLLKRFKTPRRVVLTGSPLQNNLEEY 617

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 979
            +CMVDFVR   LGS  +FRN F NPI NGQ  +ST +D+K+M  RS++L + L  FVQR 
Sbjct: 618  WCMVDFVRPDHLGSIDDFRNMFVNPINNGQCIDSTDKDIKLMKYRSYVLQQLLAPFVQRR 677

Query: 980  DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALA 1039
            D  V++  LP K  + I+V+LS  Q  LY        FT  +   +      F  Y   A
Sbjct: 678  DDAVLRASLPQKNEYTISVRLSKWQAFLY--------FTLMQYVRQAQSLRLFHMYTTAA 729

Query: 1040 QIWNHPGILQLTKDKGYPSREDAEDSSSD------ENMDYNVVIGEKPRNMN---DFLQG 1090
             IWN+P  L LT  K   +RE A    SD      E  + +++    P + N     LQ 
Sbjct: 730  LIWNNPDALFLTMLK---ARESAHMKRSDDMQRQREQNEEHLMKSLTPEDRNLLEALLQA 786

Query: 1091 ---KNDDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLD-ILTMCSNMGDKSLVFSQSI 1144
               K+ D   +  W   L  ++ Y     + + K  LL++ I+     + +K L+FSQSI
Sbjct: 787  WPIKSRD-LEEMGWAERLFMQYKYLPFITENAFKFKLLMECIVPKAVELQEKVLIFSQSI 845

Query: 1145 PTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEP-LNKRVKCT 1203
            P LDL+E YL+++  P    + W+K K ++RLDG T ++ R KL+E FN+  +N      
Sbjct: 846  PALDLLEQYLARVNVPNSNER-WEKDKHYFRLDGSTHATSRTKLIEDFNDTDVNDNCHLF 904

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            L+STRAGSLGINL +ANRV+I+D SWNPT+D QA+ R +RYGQ++    YRL+A GTMEE
Sbjct: 905  LLSTRAGSLGINLTAANRVVILDASWNPTHDSQAVCRVYRYGQSRNCHIYRLIASGTMEE 964

Query: 1264 KIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
             IY RQ+ K GL+ RVVD +   R  + E++   + +
Sbjct: 965  TIYNRQIHKLGLSQRVVDTENPERLFTTEQLDEFYTY 1001


>gi|189535029|ref|XP_687332.3| PREDICTED: helicase ARIP4 [Danio rerio]
          Length = 1437

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/677 (37%), Positives = 377/677 (55%), Gaps = 92/677 (13%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            ++N+     EE + +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GCILAH+M
Sbjct: 259  LININHPAEEEDLFLAPQLARAVKPHQIGGIRFLYDNLVESLERYKT-SSGFGCILAHSM 317

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE--LKP------ 813
            GLGKT QVI+F+   +R  + G +T L + PVN L NW  EF  W P+   L P      
Sbjct: 318  GLGKTLQVISFIDVLLR--HTGAKTVLAIVPVNTLQNWLAEFNLWLPAAEALPPDTDPQQ 375

Query: 814  -----LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--------- 857
                  +V +L D  +    RA+++  W   GGV L+GY  +R LS  K           
Sbjct: 376  VLPRTFKVHILNDEHKTTVARAKVVEDWTGDGGVLLMGYEMYRLLSLKKSFVTGRKRKSK 435

Query: 858  --------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 902
                          + + + + I  AL + GPD+++CDE H IKN  A T+QALK ++ +
Sbjct: 436  KPAGPVIIDLDEEDRQQELMKAIERALSRPGPDVVICDEGHRIKNCHASTSQALKNIRSR 495

Query: 903  RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMN 962
            RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +DV++M 
Sbjct: 496  RRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVQLMR 555

Query: 963  QRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRV 1022
             RSH+L+  L+GFVQR   +V++  LPPK   VI V+LS LQR LY  F++         
Sbjct: 556  YRSHVLHSLLEGFVQRRGHDVLRHQLPPKEEHVILVRLSRLQRALYTEFMN--------- 606

Query: 1023 SNEKIRKSFFAGYQAL---------AQIWNHPGILQLTKDKGYPSRE---DAED------ 1064
               + R++  +G+  L          +IWNHP +L     K   + E   D +D      
Sbjct: 607  ---RFREAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDLDDLNSSSG 663

Query: 1065 ----------SSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                       +SD      + +G    ++N   +  N       +W  +++  +    L
Sbjct: 664  TRCSAPGIKSKTSDAANSRQMSVG----HLNPLQEKANQ--VITYEWAKEVMTNYQTGVL 717

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ---GKLWKKGK 1171
            + S KMVLL  ++      GDK LVFSQS+ TL +IE +LS+ P P +       W +  
Sbjct: 718  ENSAKMVLLFYLIDETVARGDKILVFSQSLSTLTVIEDFLSRRPMPIQTETGTHNWVRNI 777

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
            ++YRLDG T +SER++L+ +FN+P N +    L+STRAG LG+NL  ANRV++ D SWNP
Sbjct: 778  NYYRLDGSTSASERERLINQFNDPANTQAWVFLLSTRAGCLGVNLIGANRVVVFDASWNP 837

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
             +D QA+ R +RYGQ KP   YRL+   T+E+KIY RQV+K+G++ RVVD        ++
Sbjct: 838  CHDAQAVCRVYRYGQRKPCHIYRLVCDFTLEKKIYDRQVSKQGMSDRVVDDLNPVLNFTR 897

Query: 1292 EEMLHLFEFGDDENPDP 1308
            +E+  L  F ++E PDP
Sbjct: 898  KEVESLLHFVEEE-PDP 913


>gi|195038055|ref|XP_001990476.1| GH18228 [Drosophila grimshawi]
 gi|193894672|gb|EDV93538.1| GH18228 [Drosophila grimshawi]
          Length = 1336

 Score =  445 bits (1144), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 265/738 (35%), Positives = 421/738 (57%), Gaps = 89/738 (12%)

Query: 629  RKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAG 688
            + ++K IR+I+   +L   TK     E +R++R++  Q       K+ N +         
Sbjct: 407  KNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEERQ-------KIYNRI-----FEKS 454

Query: 689  ASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKS 748
             +IE     I+  I++   E  +  +++   +  KLK HQV G++FMW+   +++++ + 
Sbjct: 455  ENIE-----ISELILDFDEESKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESEK 509

Query: 749  GDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
             + G GCILAH MGLGKT QV+   +T +  S   G+   L+++P++ ++NW +EF+ W 
Sbjct: 510  -NAGSGCILAHCMGLGKTLQVVTLSHTLLINSRRTGVERVLVISPLSTVNNWAREFVHWM 568

Query: 808  PSELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA 863
                   R   + D+SR +    R   L +W  +GGV ++GY  +R L+  K    R   
Sbjct: 569  A--FAHRRDIEIYDISRYKDKPTRIFKLNEWYEEGGVCILGYDMYRILANEKAKGLRKKQ 626

Query: 864  RE-ICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 921
            RE + HAL + GPD++VCDE H++KN +   ++A+ +++ +RRI LTG+PLQNNL EYYC
Sbjct: 627  REQLQHALVEPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLKEYYC 686

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 981
            M+ FV+   LG+  E+ NRF NPI NGQ+T+ST  D+++M  RSHIL++ L+G +QR D 
Sbjct: 687  MIQFVKPSLLGTYKEYMNRFVNPISNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDY 746

Query: 982  NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQALA 1039
            +V+   LPPK  +V+   LS LQ++LY  ++  H    D+ S++   K    F  +Q L 
Sbjct: 747  SVLAPYLPPKHEYVVYTTLSELQQQLYGYYMTTH---RDQGSSDICGKGARLFQDFQDLR 803

Query: 1040 QIWNHPGILQLTKD----KGYPSREDAED--------------SSSDENMD-----YNVV 1076
            +IW HP  L++  D    K   S +D+E+              S+S E++D      ++ 
Sbjct: 804  RIWTHPMNLRVNSDTVIAKRLLSNDDSEEEGFICDDSEEEEVVSNSSESIDSFKSDASLT 863

Query: 1077 IG------------EKPRN-MNDFLQGKNDD------GF-FQKD----WWNDLLHEHTYK 1112
            +G             K RN + D L   + D      G   QKD    WW   + E    
Sbjct: 864  MGNTDAAGGSKMKCRKTRNGVRDGLNDSDSDVECMGGGVSIQKDDPSEWWKPFVEEKELN 923

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL------ 1166
             +++S K+++LL +L  C  +GDK LVFSQS+ +LD+IE +LS +    K  +       
Sbjct: 924  NVNHSPKLLMLLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNSKGYEFEGDVGN 983

Query: 1167 ----WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
                W +G+D++RLDG     +R+ + ++FN   N R +  LISTRAG LGINL +ANRV
Sbjct: 984  FKGSWIQGEDYFRLDGSCSVEQRESMCKQFNNASNVRARLFLISTRAGGLGINLVAANRV 1043

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            +I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+Y+RQV K+  A RV+D 
Sbjct: 1044 VIFDVSWNPSHDTQSIFRVYRFGQVKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDE 1103

Query: 1283 QQVHRTISKEEMLHLFEF 1300
            QQ+ R  ++ +++ L+ +
Sbjct: 1104 QQISRHYNQTDLMELYTY 1121


>gi|47229701|emb|CAG06897.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1219

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 278/777 (35%), Positives = 411/777 (52%), Gaps = 110/777 (14%)

Query: 664  SLQVQFSSKSKLMNSVTLDGDLSAGASI-EVLG--DAITGYIVNVVREKGEEAVRIPSSI 720
            SLQ+   S  +  N  T   + S+GA I + L   D++   +VN+     E+ + +   +
Sbjct: 125  SLQISSESADEDANGTT-GTEESSGAHINDALNQPDSLGHVLVNINHPAEEKDLYLAPQL 183

Query: 721  SAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV 780
            +  +K HQ+ GIRF+++N+++S+ + K+   G GCILAH+MGLGKT QVI+F+   MR  
Sbjct: 184  ARAVKPHQIGGIRFLYDNLVESLERYKTS-SGFGCILAHSMGLGKTLQVISFIDVLMR-- 240

Query: 781  NLGLRTALIVTPVNVLHNWKQEFMKWRPSE--LKP-----------LRVFMLEDVSRDR- 826
            N    T L + PVN L NW  EF  W P++  L P             V +L D  +   
Sbjct: 241  NTETHTVLAIVPVNTLQNWLTEFNLWLPAQESLPPETDPTLVTGRSFNVHVLNDEHKTTM 300

Query: 827  -RAELLAKWRAKGGVFLIGYTAFRNLSF------GKHVKDRNMAREICHALQD------- 872
             RA+++  W   GGV L+GY  +R L+       GK  K + +   +   L +       
Sbjct: 301  ARAKVVEDWSRDGGVLLMGYEMYRLLTMKKSFVMGKRRKSKKITGPVIIDLDEEDRQQEL 360

Query: 873  -----------GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 921
                       GPD+++CDE H IKN  A T+QALK ++ +RR+ LTG PLQNNL+EY+C
Sbjct: 361  MKGIERAIARPGPDVVICDEGHRIKNYHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWC 420

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 981
            MVDFVR  FLG+  EF N F+ PI NGQ  +ST +DV++M  RSH+L+  L+GFVQR   
Sbjct: 421  MVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGH 480

Query: 982  NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL--- 1038
            +V++  LP K   VI V+LSP+QR LY  F+            ++ R++   G+  L   
Sbjct: 481  DVLRDQLPSKQEHVILVRLSPIQRALYTEFM------------KRFREAGNTGWLGLNPL 528

Query: 1039 ------AQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY-NVVIGEKPR--------- 1082
                   +IWNHP +L     K        E+ ++++++D  ++     PR         
Sbjct: 529  KAFCVCCKIWNHPDVLYEALQK--------ENQTNEQDLDLDDITSAGNPRCPAPGTGLK 580

Query: 1083 -NMNDFLQGKND------------DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTM 1129
              + D    KN+            +     +W  +++  +    L+ S KMVLL  ++  
Sbjct: 581  AKVADPCNSKNNATLPINHTQDRANQVITYEWAKEIMSSYQTGILENSAKMVLLFHLIEE 640

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG------KQGKLWKKGKDWYRLDGRTESS 1183
                 DK LVFSQS+ TL +IE +LSK P P        + + W +  ++YRLDG T +S
Sbjct: 641  SVKKRDKLLVFSQSLSTLSVIEDFLSKRPMPSGITSSEPRSQNWVRNLNYYRLDGSTSAS 700

Query: 1184 ERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1243
            ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ D SWNP +D QA+ R +R
Sbjct: 701  ERERLINQFNDPENNTAWIFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYR 760

Query: 1244 YGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            YGQ KP F YRL+   T+E+KIY RQV+K+G++ RVVD        +++E+  L  F ++
Sbjct: 761  YGQRKPCFIYRLVCDFTLEKKIYDRQVSKQGMSDRVVDDLNPGLNFTRKEVESLLHFVEE 820

Query: 1304 ENPDPLTAVSKENGQGSSQNTNCALKHKL----PLSHEGCSDKLMESLLGKHHPRCA 1356
            E      AV +++ +   Q   C L   L    P  HE       ES L K   R A
Sbjct: 821  EAGQFSLAVQEDSEEVLYQ--ACKLYPHLITKEPFHHESLLVDRKESKLTKAEKRAA 875


>gi|410899204|ref|XP_003963087.1| PREDICTED: helicase ARIP4-like [Takifugu rubripes]
          Length = 1462

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/679 (37%), Positives = 375/679 (55%), Gaps = 83/679 (12%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA    +VN+     E+ + +   ++  +K HQ+ GIRF+++N+I+S+    +   G GC
Sbjct: 242  DAQGRVLVNLNHPSEEKDIFLLPQLARAIKPHQIGGIRFLYDNLIESVENFGN-SSGFGC 300

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE--LKP 813
            ILAH+MGLGKT QVI+F+    R       T L + PVN L NW  EF  W P+   L P
Sbjct: 301  ILAHSMGLGKTLQVISFIDILFRHTRA--HTVLAIVPVNTLQNWLSEFNTWVPAPETLPP 358

Query: 814  -----------LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKH---- 856
                        +V +L D  ++   RA+++ +W   GGV L+GY  +R LS  K+    
Sbjct: 359  DTDPGLVAPRAFKVHILNDEHKNTATRAKVVEEWARDGGVLLMGYEMYRLLSLKKNYVAG 418

Query: 857  ---------------VKDRNMAREICHALQ-----DGPDILVCDEAHMIKNTRADTTQAL 896
                           V + +  +E+   ++      GPD+++CDE H IKN  A T+ AL
Sbjct: 419  RKKKNKKATGPVVINVDEEDRQQELLKGIEKALARPGPDVVICDEGHRIKNCHASTSHAL 478

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K+++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST E
Sbjct: 479  KKIQTRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCVDSTPE 538

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR   +V++  LP K   VI V+LSPLQR LY  F++   
Sbjct: 539  DVQLMRYRSHVLHSLLEGFVQRRGHDVLRDQLPSKQEHVILVRLSPLQRALYTEFMNRF- 597

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVV 1076
               +  +   +  +    +    +IWNHP +L     K        E+ + D+++D + +
Sbjct: 598  --KEAGNTGWLSLNPLKAFSVCCKIWNHPDVLFEALQK--------ENLAGDQDLDLDDI 647

Query: 1077 I-----------GEKPR-----------NMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                         +KP+           ++N   +  N       +W  D++ ++    L
Sbjct: 648  TTTAPTRCLSTPNQKPKPPENPHPIGGLSLNQLQEKANQ--VITYEWAKDIMSDYKPGVL 705

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG-----KQGKLWKK 1169
            + S KMVLL  ++      GDK LVFSQS+ TL +IE +L+K P P      K  + W +
Sbjct: 706  ENSAKMVLLFHLIEESVRKGDKLLVFSQSLSTLTVIEDFLAKRPVPPSPKKDKPNQTWVR 765

Query: 1170 GKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
              ++YRLDG T  SER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ D SW
Sbjct: 766  NINYYRLDGSTTVSERERLINQFNDPSNTSAWLFLLSTRAGCLGVNLIGANRVVVFDASW 825

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTI 1289
            NP +D QA+ R +RYGQ KP   YRL+   T+E+KIY RQ++K+G++ RVVD      T 
Sbjct: 826  NPCHDAQAVCRVYRYGQRKPCHIYRLVCDFTLEKKIYDRQISKQGMSDRVVDDLNPVLTF 885

Query: 1290 SKEEMLHLFEFGDDENPDP 1308
            ++ E+  L  F  +E PDP
Sbjct: 886  TRREVESLLHF-VEEVPDP 903


>gi|196003014|ref|XP_002111374.1| hypothetical protein TRIADDRAFT_55311 [Trichoplax adhaerens]
 gi|190585273|gb|EDV25341.1| hypothetical protein TRIADDRAFT_55311 [Trichoplax adhaerens]
          Length = 954

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/652 (36%), Positives = 361/652 (55%), Gaps = 67/652 (10%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            I+N      E  + I   +   LK HQV GI+F++ N+++S ++ +  D GLGCILAH+M
Sbjct: 236  IINANHPTSEIDICISPHLIPVLKTHQVAGIKFLFNNVVESFKRYRISD-GLGCILAHSM 294

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSEL---------- 811
            GLGKT QV+AF+   +R+  L  +  L + P++ L +W  E   W PS            
Sbjct: 295  GLGKTLQVVAFIEIFLRA--LSAKCVLCIVPLSTLDHWLNEINYWLPSSTSAHLSKFNYQ 352

Query: 812  KPLRVFMLED--VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSF-----------GKHVK 858
            +P +V+ +     S   RA ++ +WR  GGV +IGY  +R L             GK V 
Sbjct: 353  RPFKVYQISSNCKSLKDRANIINEWRNIGGVLIIGYDMYRILMTMSAYQNNTKKKGKKVA 412

Query: 859  --------DRNMAREICHALQD--------GPDILVCDEAHMIKNTRADTTQALKQVKCQ 902
                    D ++  E    ++D        GPD+++CDE H++KN  A  T+ LK++K +
Sbjct: 413  SSDSMEIVDLDLIEEKSQYIKDIRLALSDPGPDLVICDEGHILKNATASVTKTLKEIKTK 472

Query: 903  RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMN 962
            RRI LTG P+QNNL+EY+CMVDFVR  +LG   +F N F+ PI NG+  +ST  D+K M 
Sbjct: 473  RRIVLTGYPIQNNLIEYWCMVDFVRPNYLGDKKQFSNMFERPIANGECVDSTPNDIKKMR 532

Query: 963  QRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRV 1022
             RS++L + LKGFVQR    ++K  L PK  +V+ +++SP+Q RLY  F++     N   
Sbjct: 533  FRSYVLQKMLKGFVQRRSQKILKDALLPKKEYVLLIRMSPIQERLYNAFIECVIKKNWTK 592

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSREDAEDSSSDENMDYNVVIGE 1079
             + KI  +    +  L ++WNHP +L    + +DK Y       D  +D + D  + +G 
Sbjct: 593  ISLKIGANVLLAFSVLYKVWNHPDVLHRAIMEQDKTY-----QNDILNDADRDLELELGA 647

Query: 1080 KPRNMNDFLQGKNDDGFFQK-------------DWWNDLLHEHTYKELDYSGKMVLLLDI 1126
               N N  + G ++    ++              W    +  +    L++ GKMV+L+D+
Sbjct: 648  NTSNDNSDVHGNHETKVTRRTNKTEDEGSSIDYSWAFPSMAHYAPGVLEHGGKMVILMDL 707

Query: 1127 LTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK----QGKLWKKGKDWYRLDGRTES 1182
            +     +GD+ L+FSQS+ TL +IE +LSK+  P        K W K + ++R+DG   S
Sbjct: 708  IENSVKLGDRMLIFSQSLVTLSIIEHFLSKIEIPCTSSEGNNKKWAKNESYFRIDGSVPS 767

Query: 1183 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1242
             ER +L++ FN P N  V   LISTRAG+LGINL +ANRV+I D +WNP YD QA +R +
Sbjct: 768  HERSRLIDLFNSPDNNSVWLFLISTRAGNLGINLVAANRVVIYDSAWNPCYDNQAAFRIY 827

Query: 1243 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            RYGQ KP + YRL+   TME  IYKRQ+ K+GL+ R++D +      +  E+
Sbjct: 828  RYGQKKPCYIYRLVGSNTMEHVIYKRQIRKQGLSRRIIDERHPGAVFTSREL 879


>gi|195573901|ref|XP_002104930.1| GD18194 [Drosophila simulans]
 gi|194200857|gb|EDX14433.1| GD18194 [Drosophila simulans]
          Length = 1098

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 269/763 (35%), Positives = 421/763 (55%), Gaps = 103/763 (13%)

Query: 607  VSSSESDSENSDADNNLKIGGKRKQKKK-IRRILDDAELGEETKRKIAIEKERQERLKSL 665
             SS ESD++  D         K+K K+K IR+I+   +L   TK     E +R++R++  
Sbjct: 362  TSSGESDADGDD--------DKQKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDR 413

Query: 666  QVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLK 725
            Q       KL N + +  +     S+E     I+  +++   E  +  +++   +  KLK
Sbjct: 414  Q-------KLYNRIFVKSE-----SVE-----ISELVLDFDEESKKALLQVDKGLLKKLK 456

Query: 726  AHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGL 784
             HQV G++FMW+   +++++ +    G GCILAH MGLGKT QV+   +T +  +   G+
Sbjct: 457  PHQVAGVKFMWDACFETLKESQE-KPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGV 515

Query: 785  RTALIVTPVNVLHNWKQEFMKW-RPSELKPLRVFMLEDVSRDR----RAELLAKWRAKGG 839
               LI++P++ ++NW +EF  W + +    + V+   D+SR +    R   L +W  +GG
Sbjct: 516  ERVLIISPLSTVNNWAREFTSWMKFANRNDIEVY---DISRYKDKPTRIFKLNEWFNEGG 572

Query: 840  VFLIGYTAFRNLSFGKHVKDRNMARE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALK 897
            V ++GY  +R L+  K    R   RE +  AL D GPD++VCDE H++KN +   ++A+ 
Sbjct: 573  VCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVT 632

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
            +++ +RRI LTG+PLQNNL EYYCM+ FV+   LG+  E+ NRF NPI NGQ+T+ST  D
Sbjct: 633  RMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERD 692

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
            +++M  RSHIL++ L+G +QR D +V+   LPPK  +V+   LS LQ++LY  ++  H  
Sbjct: 693  LRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTH-- 750

Query: 1018 TNDRVSNEKIRKS--FFAGYQALAQIWNHPGILQLTKD---------------KGYPSRE 1060
              ++   + + K    F  +Q L +IW HP  L++  D               +G+   E
Sbjct: 751  -REQSGGDVVGKGARLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICDE 809

Query: 1061 DAEDSSSDENMDY-----------------NVVIGEKPRNMNDFLQGKNDDGFF------ 1097
              ED ++  + D                    V   K RN N    G + D         
Sbjct: 810  TDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGN--AGGGDSDSDLEMLGGL 867

Query: 1098 ------QKD----WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
                  QKD    WW   + E     + +S K+++LL +L  C  +GDK LVFSQS+ +L
Sbjct: 868  GGGSSAQKDDPSEWWKPFVEERELNNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSL 927

Query: 1148 DLIEFYLSKLPRPGKQGKL----------WKKGKDWYRLDGRTESSERQKLVERFNEPLN 1197
            D+IE +LS +    K  +           W  GKD++RLDG     +R+ + ++FN   N
Sbjct: 928  DVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNVTN 987

Query: 1198 KRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMA 1257
             R +  LISTRAG LGINL +ANRV+I D SWNP++D Q+I+R +R+GQ KP + YRL+A
Sbjct: 988  LRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIA 1047

Query: 1258 HGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
             GTME+K+Y+RQV K+  A RV+D QQ+ R  ++ +++ L+ +
Sbjct: 1048 MGTMEQKVYERQVAKQATAKRVIDEQQISRHYNQTDLMELYSY 1090


>gi|270013006|gb|EFA09454.1| hypothetical protein TcasGA2_TC010670 [Tribolium castaneum]
          Length = 1618

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/652 (39%), Positives = 359/652 (55%), Gaps = 88/652 (13%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            + N+   + E  + +   I+  +K HQ+ G+RF+++N+I+S  + +S   G GCILAH+M
Sbjct: 439  VANIGHPENEPDLFLAPQIARIIKPHQIGGVRFLYDNVIESTSRFESS-TGFGCILAHSM 497

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE----LKPLRVF 817
            GLGKT QV+ F    +R  +   +T L + P+N L NW  EF  W P+E      PL V 
Sbjct: 498  GLGKTLQVVCFSDIFLR--HTPAKTILCIMPINTLQNWMAEFNMWLPTEEAVATSPLTVH 555

Query: 818  -----------MLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN--- 861
                       +L D  +    R +++  W+A GGV LIGY  FR LS  KH K R    
Sbjct: 556  GEVRPRKFNLHVLNDSHKTLAARHKVIKAWKAGGGVLLIGYEQFRLLSLRKHPKSRRKPL 615

Query: 862  ------------MAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALT 908
                        +  EI  AL + GPD+++CDE H IKN+ A  +QALKQ++ +RR+ LT
Sbjct: 616  VAEPADDDSNKPLFDEIHEALVKPGPDLVICDEGHRIKNSHASISQALKQMRTKRRVVLT 675

Query: 909  GSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHIL 968
            G PLQNNLMEY+CMVDFVR  +LGS  EF N F+ PI NGQ  +ST  D+K+M  R+H+L
Sbjct: 676  GYPLQNNLMEYWCMVDFVRPNYLGSKTEFCNMFERPIMNGQCIDSTEADIKLMRYRAHVL 735

Query: 969  YEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIR 1028
            +  L GFVQR    V++  LP K  +V+ V++ P QR+LY+ F+       D V   +  
Sbjct: 736  HSLLVGFVQRRSHAVLQTTLPQKEEYVLLVRMLPFQRKLYETFM-------DEVVRSQAV 788

Query: 1029 KSFFAGYQALAQIWNHPGIL-QLTKDKGYPSREDAEDSSSDENMDYNVVI---------- 1077
             +    +    +IWNHP +L    K +   +R DA D   +E      V           
Sbjct: 789  PNPLKAFAVCCKIWNHPDVLYNFLKKR---ARGDAVDIDLEEVASTTGVANKAKKAPPRP 845

Query: 1078 ---------GEKP--------RNMNDFLQGKND-----DGFFQK------DWWNDLLHEH 1109
                     G KP           N   Q  ND     + FF++      DW  +LL ++
Sbjct: 846  RKSAAKGKPGAKPAASVTPYNATENPTQQTTNDQNFQRNNFFEQDSGIPYDWAIELLKDY 905

Query: 1110 TYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKK 1169
                ++ S KM +L  I+     +GD+ LVFSQS+ TLDLIE +L     PG   K W +
Sbjct: 906  VPGRIENSAKMEILFCIIRESIALGDRLLVFSQSLITLDLIEQFLQMNVVPGDTQK-WCR 964

Query: 1170 GKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
              ++YRLDG T + ER+KL+  FN   N ++   L+STRAGSLGINL  ANRV+++D SW
Sbjct: 965  NTNYYRLDGSTSALEREKLINEFNS--NPKIHVFLVSTRAGSLGINLIGANRVVVLDASW 1022

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            NP +D QA+ R +RYGQ KP F YRL+    +E+KIY RQ+ K+G++ RVVD
Sbjct: 1023 NPCHDTQAVCRVYRYGQRKPCFVYRLVVDNCLEKKIYDRQINKQGMSDRVVD 1074


>gi|157126395|ref|XP_001654617.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti]
 gi|108873303|gb|EAT37528.1| AAEL010502-PA [Aedes aegypti]
          Length = 2905

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 259/721 (35%), Positives = 390/721 (54%), Gaps = 85/721 (11%)

Query: 628  KRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNS--------- 678
            K  +++KIR +L   +L +ETK   + +K+ + R+  L+ +  +  K + +         
Sbjct: 1309 KENKQRKIRTMLTQDQLADETK---SAQKDEEIRISRLKKKNENLKKFLTTFKPGSEESH 1365

Query: 679  VTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWEN 738
            + LD D   G +I V  D     IV +                  LK HQ  G+RFM++N
Sbjct: 1366 LVLDYDAKVGKAICVHPD-----IVKL------------------LKPHQKEGVRFMYDN 1402

Query: 739  IIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHN 798
               S+  + + + G GCILAH MGLGKT Q+I  L+T MR   L  +  L++ P + + N
Sbjct: 1403 TYGSVEYI-NKNPGSGCILAHCMGLGKTLQLITLLHTVMRYPQLKTKRVLVICPKSTVMN 1461

Query: 799  WKQEFMKWRPSELKP---LRVFMLEDVSR-DRRAELLAKWRA----KGGVFLIGYTAFRN 850
            W  E   W    LK    L+VF   D S  + + ++L+ W +    + G  LIGY AFR 
Sbjct: 1462 WSDEIQHWL-GALKSGPRLKVFYFPDNSDVNDKLKVLSDWYSSTANRCGCMLIGYEAFRI 1520

Query: 851  LSFGKHVKDRNMAREIC-------------HALQDGPDILVCDEAHMIKNTRADTTQALK 897
            L    + K +     I              + L  G D+++CDE H IKN ++  + A+ 
Sbjct: 1521 LV--NYEKRKRTPSNILAAKAAFVKKKVDEYLLNPGADLVICDEGHQIKNKKSAISGAVS 1578

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
            Q+K +RRI LTG+P+QNNL EYYCMV+F++  FLGS  EF N + NPI+NGQH +S S  
Sbjct: 1579 QIKTKRRIVLTGTPIQNNLKEYYCMVNFIKPSFLGSDREFANLYANPIKNGQHKDSDSRA 1638

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
            +KIM QRS++L+ +L  FVQR +  V+K+ LP K  +V+ V L+P+Q ++Y+ FL ++ +
Sbjct: 1639 IKIMKQRSYVLHNKLSRFVQRREAGVLKEFLPEKFEYVLFVPLTPVQEKMYEVFLQMNEY 1698

Query: 1018 TN---DRVSNEKIRKSF--FAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
            T    + +S+    K F   A Y +L +IW HP +L+    K +   E A    +  +  
Sbjct: 1699 TTPAGEPISDAAKGKKFKLLADYTSLRKIWTHPKVLE----KAW---ETAVQEKNKRDAR 1751

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQ--KDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 1130
            + +       +           G      DWW   L  +  + L  SGK+ ++ +IL  C
Sbjct: 1752 FRLTSTPDSDDDRPDDYNDISSGALSVTNDWWRKHLEANDLESLYPSGKLRIMFEILKQC 1811

Query: 1131 SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL-----------WKKGKDWYRLDGR 1179
               G+K L+FS  +  L+++E +++K+    K+              W+ GKD+YRLDG+
Sbjct: 1812 QERGEKCLIFSAFVAVLNVVEHFMTKIHNREKESMADVYGYSTFKGPWEPGKDYYRLDGK 1871

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
            T+ + R +++  FN+P NKR KC LIS +AG  GINL  ANRVII+D SWNP+ D Q I+
Sbjct: 1872 TQKNLRHRMITSFNDPSNKRTKCFLISAKAGGQGINLIGANRVIILDTSWNPSNDQQNIF 1931

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFE 1299
            R +R GQ K  F YRL+A GTMEEK+Y R VTK+ ++ RVVD QQ+ R  S  E+  L+ 
Sbjct: 1932 RIFRLGQKKKCFVYRLLAMGTMEEKVYSRSVTKQAMSFRVVDEQQIDRHYSFSELAELYN 1991

Query: 1300 F 1300
             
Sbjct: 1992 L 1992


>gi|432857297|ref|XP_004068626.1| PREDICTED: helicase ARIP4-like [Oryzias latipes]
          Length = 1444

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 276/748 (36%), Positives = 393/748 (52%), Gaps = 92/748 (12%)

Query: 686  SAGASIE---VLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQS 742
            S+GA I     L DA    +VN+     E+ + +   ++  +K HQV GIRF+++N+I+S
Sbjct: 228  SSGAHINDALNLPDAQGRVLVNINHPAEEKDIFLAPQLARAVKPHQVGGIRFLYDNLIES 287

Query: 743  IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQE 802
            + + K+   G GCILAH+MGLGKT QVI+F+   +R  N    T L + PVN L NW  E
Sbjct: 288  LERYKTS-SGFGCILAHSMGLGKTLQVISFIDILLR--NTEAHTVLAIVPVNTLQNWLTE 344

Query: 803  FMKW-RPSELKP------------LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTA 847
            F  W  PSE  P             +V +L D  +    RA+++ +W   GGV L+GY  
Sbjct: 345  FNLWLPPSEALPPDTDPSVVLARTFKVHILNDEHKTTLARAKVVEEWSRDGGVLLMGYEM 404

Query: 848  FRNLSF------GKHVKDRNMAREICHALQD------------------GPDILVCDEAH 883
            +R LS       GK  K +  A  +   L +                  GPD+++CDE H
Sbjct: 405  YRLLSMKKSFVMGKKRKSKKPAGPVIIDLDEEDRQQELMKGIEKAIARPGPDVVICDEGH 464

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
             IKN  A T+QALK ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ 
Sbjct: 465  RIKNYHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFER 524

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            PI NGQ  +ST +DV++M  RSH+L+  L+GFVQR   +V++  LP K   VI V+LS +
Sbjct: 525  PILNGQCVDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHDVLRDQLPAKDEHVILVRLSSV 584

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL---------AQIWNHPGILQLTKDK 1054
            QR LY  F+            ++ R++  +G+  L          +IWNHP +L     K
Sbjct: 585  QRALYTEFM------------KRFREAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQK 632

Query: 1055 GYPSRE---DAEDSSSDENMDYNV--------VIGEKPRNMNDFLQGKN-----DDGFFQ 1098
               + E   D +D +S  N             V       +N  L   N      +    
Sbjct: 633  ENQANEQDLDLDDITSAGNARCPAPSTGLKAKVTDSSNSKVNSSLPPLNASQDRTNQVIT 692

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
             +W  D++  +    L+ S KM+LL  I+       DK LVFSQS+ TL +IE +LSK P
Sbjct: 693  YEWAKDIMSNYRMGVLENSAKMLLLFHIIDESVRKRDKLLVFSQSLSTLTVIEDFLSKRP 752

Query: 1159 RP------GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
             P        Q + W +  ++YRLDG T +SER++L+ +FN+P N +    L+STRAG L
Sbjct: 753  MPQNINSSDSQNQNWVRNLNYYRLDGSTSASERERLINQFNDPENNKTWVFLLSTRAGCL 812

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANRV++ D SWNP +D QA+ R +RYGQ K  + YRL+   T+E+KIY RQV+K
Sbjct: 813  GVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQVKRCYIYRLVCDFTLEKKIYDRQVSK 872

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKL 1332
            +G++ RVVD        +++E+  L  F ++E      ++  +N         C L   L
Sbjct: 873  QGMSDRVVDDLNPVLNFTRKEVESLLHFVEEEPETEKISLESQNEYEEVMFKACQLYPNL 932

Query: 1333 ----PLSHEGCSDKLMESLLGKHHPRCA 1356
                P  HE       ES L K   R A
Sbjct: 933  ITKPPFHHESLLVDRKESKLTKAEKRAA 960


>gi|195349449|ref|XP_002041257.1| GM10241 [Drosophila sechellia]
 gi|194122952|gb|EDW44995.1| GM10241 [Drosophila sechellia]
          Length = 1308

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 269/763 (35%), Positives = 421/763 (55%), Gaps = 103/763 (13%)

Query: 607  VSSSESDSENSDADNNLKIGGKRKQKKK-IRRILDDAELGEETKRKIAIEKERQERLKSL 665
             SS ESD++  D         K+K K+K IR+I+   +L   TK     E +R++R++  
Sbjct: 359  TSSGESDADGDD--------DKQKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDR 410

Query: 666  QVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLK 725
            Q       KL N + +  +     S+E     I+  +++   E  +  +++   +  KLK
Sbjct: 411  Q-------KLYNRIFVKSE-----SVE-----ISELVLDFDEESKKALLQVDKGLLKKLK 453

Query: 726  AHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGL 784
             HQV G++FMW+   +++++ +    G GCILAH MGLGKT QV+   +T +  +   G+
Sbjct: 454  PHQVAGVKFMWDACFETLKESQE-KPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGV 512

Query: 785  RTALIVTPVNVLHNWKQEFMKW-RPSELKPLRVFMLEDVSRDR----RAELLAKWRAKGG 839
               LI++P++ ++NW +EF  W + +    + V+   D+SR +    R   L +W  +GG
Sbjct: 513  ERVLIISPLSTVNNWAREFTSWMKFANRNDIEVY---DISRYKDKPTRIFKLNEWFNEGG 569

Query: 840  VFLIGYTAFRNLSFGKHVKDRNMARE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALK 897
            V ++GY  +R L+  K    R   RE +  AL D GPD++VCDE H++KN +   ++A+ 
Sbjct: 570  VCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVT 629

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
            +++ +RRI LTG+PLQNNL EYYCM+ FV+   LG+  E+ NRF NPI NGQ+T+ST  D
Sbjct: 630  RMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERD 689

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
            +++M  RSHIL++ L+G +QR D +V+   LPPK  +V+   LS LQ++LY  ++  H  
Sbjct: 690  LRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTH-- 747

Query: 1018 TNDRVSNEKIRKS--FFAGYQALAQIWNHPGILQLTKD---------------KGYPSRE 1060
              ++   + + K    F  +Q L +IW HP  L++  D               +G+   E
Sbjct: 748  -REQSGGDVVGKGARLFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICDE 806

Query: 1061 DAEDSSSDENMDY-----------------NVVIGEKPRNMNDFLQGKNDDGFF------ 1097
              ED ++  + D                    V   K RN N    G + D         
Sbjct: 807  TDEDEAASNSSDSCDTFKSDASMSGLAASSGKVKKRKTRNGN--AGGGDSDSDLEMLGGL 864

Query: 1098 ------QKD----WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
                  QKD    WW   + E     + +S K+++LL +L  C  +GDK LVFSQS+ +L
Sbjct: 865  GGGSSAQKDDPSEWWKPFVEERELNNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSL 924

Query: 1148 DLIEFYLSKLPRPGKQGKL----------WKKGKDWYRLDGRTESSERQKLVERFNEPLN 1197
            D+IE +LS +    K  +           W  GKD++RLDG     +R+ + ++FN   N
Sbjct: 925  DVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNVTN 984

Query: 1198 KRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMA 1257
             R +  LISTRAG LGINL +ANRV+I D SWNP++D Q+I+R +R+GQ KP + YRL+A
Sbjct: 985  LRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIA 1044

Query: 1258 HGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
             GTME+K+Y+RQV K+  A RV+D QQ+ R  ++ +++ L+ +
Sbjct: 1045 MGTMEQKVYERQVAKQATAKRVIDEQQISRHYNQTDLMELYSY 1087


>gi|195395382|ref|XP_002056315.1| GJ10883 [Drosophila virilis]
 gi|194143024|gb|EDW59427.1| GJ10883 [Drosophila virilis]
          Length = 1315

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 416/740 (56%), Gaps = 92/740 (12%)

Query: 629  RKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAG 688
            + ++K IR+I+   +L   TK     E++R++R++  Q       KL N +         
Sbjct: 384  KNKRKHIRKIIKTKDLDMTTKEAAKEEEDRRKRIEERQ-------KLYNRI-----FEKS 431

Query: 689  ASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKS 748
             SIE     I+  I++   +  +  +++   +  KLK HQV G++FMW+   +++++ + 
Sbjct: 432  ESIE-----ISELILDFDEDSKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESEQ 486

Query: 749  GDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVN-LGLRTALIVTPVNVLHNWKQEFMKWR 807
               G GCILAH MGLGKT QV+   +T + +    G+   L+++P++ ++NW +EF+ W 
Sbjct: 487  -KPGSGCILAHCMGLGKTLQVVTLSHTLLTNTRRTGVERVLVISPLSTVNNWAREFVHWM 545

Query: 808  P-SELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNM 862
              +  + + V+   D+SR +    R   L +W  +GGV ++GY  +R L+  K    R  
Sbjct: 546  AFAHRRDIEVY---DISRYKDKPTRIFKLNEWYEEGGVCILGYDMYRILANEKAKGLRKK 602

Query: 863  ARE-ICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
             RE + HAL + GPD++VCDE H++KN +   ++A+ +++ +RRI LTG+PLQNNL EYY
Sbjct: 603  QREQLQHALVEPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLKEYY 662

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
            CM+ FV+   LG+  E+ NRF NPI NGQ+T+ST  D+++M  RSHIL++ L+G +QR D
Sbjct: 663  CMIQFVKPNLLGTYKEYMNRFVNPISNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRD 722

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQAL 1038
             +V+   LPPK  +V+   LS LQ++LY  ++  H    D+ S++   K    F  +Q L
Sbjct: 723  YSVLAPYLPPKHEYVVYTTLSELQQQLYGYYMTTH---RDQGSSDICGKGARLFQDFQDL 779

Query: 1039 AQIWNHPGILQLTKDKGYPSR--------------------EDAEDSSSDE----NMDYN 1074
             +IW HP  L++  D     R                    E+A  +SSD       D +
Sbjct: 780  RRIWTHPMNLRVNSDNVIAKRLLSNDDSDEMEGFICDDSEEEEAVSNSSDSAESFKSDAS 839

Query: 1075 VVI----------GEKPRNMNDFLQGKNDD----------GFFQKD----WWNDLLHEHT 1110
            + +          G+  +  N    G  D              QKD    WW   + E  
Sbjct: 840  LTLVNTDAAGGSKGKSRKTRNGVRSGLVDSDSDVELMGGGASAQKDDPSEWWKPFVEERE 899

Query: 1111 YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK----QGKL 1166
               +++S K+++LL +L  C  +GDK LVFSQS+ +LD+IE +LS +    K    +G +
Sbjct: 900  LNNVNHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKGYEFEGDV 959

Query: 1167 ------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
                  W  G+D++RLDG     +R+ + ++FN   N R +  LISTRAG LGINL +AN
Sbjct: 960  GNFKGCWTPGEDYFRLDGSCSVEQRESMCKKFNNASNLRARLFLISTRAGGLGINLVAAN 1019

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            RV+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+Y+RQV K+  A RV+
Sbjct: 1020 RVVIFDVSWNPSHDTQSIFRVYRFGQVKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVI 1079

Query: 1281 DRQQVHRTISKEEMLHLFEF 1300
            D QQ+ R  ++ +++ L+ +
Sbjct: 1080 DEQQISRHYNQTDLMELYTY 1099


>gi|195111562|ref|XP_002000347.1| GI10182 [Drosophila mojavensis]
 gi|193916941|gb|EDW15808.1| GI10182 [Drosophila mojavensis]
          Length = 1389

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 264/739 (35%), Positives = 418/739 (56%), Gaps = 90/739 (12%)

Query: 629  RKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAG 688
            + ++K IR+I+   +L   TK     E++R++R++  Q       KL N +         
Sbjct: 457  KNKRKHIRKIIKTKDLDLTTKEAAKEEEDRRKRIEERQ-------KLYNRI-----FEKS 504

Query: 689  ASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKS 748
             S+E     I+  I++   E  +  +++   +  KLK HQV G++FMW+   +++++ + 
Sbjct: 505  ESVE-----ISELILDFDEESKKALLQVDKGLLKKLKPHQVEGVKFMWDACFETLKESEQ 559

Query: 749  GDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
               G GCILAH MGLGKT QV+   +T +  +   G+   LI++P++ ++NW +EF+ W 
Sbjct: 560  -KPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVERVLIISPLSTVNNWAREFVHWM 618

Query: 808  PSELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA 863
                   R   + D+SR +    R   L +W  +GGV ++GY  +R L+  K    R   
Sbjct: 619  --SFAHRRDIEVYDISRYKDKPTRIFKLNEWFEEGGVCILGYDMYRILANEKAKGLRKKQ 676

Query: 864  RE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 921
            RE +  AL D GPD++VCDE H++KN +   ++A+ +++ +RRI LTG+PLQNNL EYYC
Sbjct: 677  REQLQQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLKEYYC 736

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 981
            M+ FV+   LG+  E+ NRF NPI NGQ+T+ST  D+++M  RSHIL++ L+G +QR D 
Sbjct: 737  MIQFVKPNLLGTYKEYMNRFVNPISNGQYTDSTDRDLRLMKHRSHILHKLLEGCIQRRDY 796

Query: 982  NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQALA 1039
            +V+   LPPK  +V+   LS LQ++LY  ++  H    D+ S++   K    F  +Q L 
Sbjct: 797  SVLAPYLPPKHEYVVYTTLSELQQQLYGYYMTTH---RDQGSSDICGKGARLFQDFQDLR 853

Query: 1040 QIWNHPGILQLTKD----KGYPSREDAE-------DSSSDENM-------------DYNV 1075
            +IW HP  L++  D    K   S +D++       D S +E++             D ++
Sbjct: 854  RIWTHPMNLRVNSDNVIAKRLLSNDDSDEMEGFICDDSEEEDVASNSSESAESFKSDASL 913

Query: 1076 VI------------GEKPRN-MNDFLQGKNDD-------GFFQKD----WWNDLLHEHTY 1111
             +            G K RN +   L   + D          QKD    WW   + E   
Sbjct: 914  TMVSSDAAGGTKIKGRKTRNGVRSGLADSDSDVECAGGSAAVQKDDPSEWWKPFVEEREL 973

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK----QGKL- 1166
              +++S K+++LL +L  C  +GDK LVFSQS+ +LD+IE +LS +    K    +G + 
Sbjct: 974  NNVNHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKGYEFEGDVG 1033

Query: 1167 -----WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                 W  G+D++RLDG     +R+ + ++FN   N R +  LISTRAG LGINL +ANR
Sbjct: 1034 NFKGCWTPGEDYFRLDGSCSVEQRESMCKKFNNASNLRARLFLISTRAGGLGINLVAANR 1093

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            V+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+Y+RQV K+  A RV+D
Sbjct: 1094 VVIFDVSWNPSHDTQSIFRVYRFGQVKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 1153

Query: 1282 RQQVHRTISKEEMLHLFEF 1300
             QQ+ R  ++ +++ L+ +
Sbjct: 1154 EQQISRHYNQTDLMELYTY 1172


>gi|348534294|ref|XP_003454637.1| PREDICTED: helicase ARIP4-like [Oreochromis niloticus]
          Length = 1513

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 259/700 (37%), Positives = 378/700 (54%), Gaps = 104/700 (14%)

Query: 686  SAGASIE---VLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQS 742
            S+GA I     L D     +VN+     E+ + +   ++  +K HQ+ GIRF+++N+I+S
Sbjct: 277  SSGAHINDDLNLPDVQGRVLVNINHPAEEKDIFLAPQLARAVKPHQIGGIRFLYDNLIES 336

Query: 743  IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQE 802
            + +  +   G GCILAH+MGLGKT QVI+F+   +R  N    T L + PVN L NW  E
Sbjct: 337  LERYNT-SSGFGCILAHSMGLGKTLQVISFIDILLR--NTEAHTVLAIVPVNTLQNWLTE 393

Query: 803  FMKWRPSE--LKP-----------LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTA 847
            F  W P +  L P            +V +L D  +    RA+++ +W   GGV L+GY  
Sbjct: 394  FNLWLPPQEALPPDTDPTFVTGRTFKVHILNDEHKTTLARAKVVEEWSRDGGVLLMGYEM 453

Query: 848  FRNLSF------GKHVKDRNMAREICHALQD------------------GPDILVCDEAH 883
            +R LS       GK  K +  A  I   L +                  GPD+++CDE H
Sbjct: 454  YRLLSMKKSFVMGKKRKSKKPAGPIIIDLDEEDRQQELMKSIEKAIARPGPDVVICDEGH 513

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
             IKN  A T+QALK ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ 
Sbjct: 514  RIKNYHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFER 573

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            PI NGQ  +ST +DV++M  RSH+L+  L+GFVQR   +V++  LP K   VI V+LSP+
Sbjct: 574  PILNGQCVDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHDVLRDQLPTKEEHVILVRLSPI 633

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL---------AQIWNHPGILQLTKDK 1054
            QR LY  F+            ++ R++   G+  L          +IWNHP +L     K
Sbjct: 634  QRALYTEFM------------KRFREAGNTGWLGLNPLKAFCVCCKIWNHPDVLYEALQK 681

Query: 1055 GYPSREDAEDSSSDENMDY-NVVIGEKPR------------------NMNDFLQGKND-- 1093
                    E+ ++++++D  ++     PR                   +N  L   N   
Sbjct: 682  --------ENQANEQDLDLDDITSASNPRCPAPGAGLKSKVADSSNSKVNSTLPPLNSSQ 733

Query: 1094 ---DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
               +     +W  D++  +    L+ S KMVLL  ++       DK LVFSQS+ TL +I
Sbjct: 734  DRANQVITYEWAKDIMSNYQRGVLENSAKMVLLFHLIDESVRRRDKILVFSQSLSTLTVI 793

Query: 1151 EFYLSKLPRP------GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTL 1204
            E +LSK P P        Q + W +  ++YRLDG T +SER++L+ +FN+  N+     L
Sbjct: 794  EDFLSKRPMPQGIASTDGQSQNWVRNLNYYRLDGSTSASERERLINQFNDTENRSTWVFL 853

Query: 1205 ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEK 1264
            +STRAG LG+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP   YRL+   T+E+K
Sbjct: 854  LSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQRKPCHIYRLVCDFTLEKK 913

Query: 1265 IYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            IY RQV+K+G++ RVVD        +++E+  L  F ++E
Sbjct: 914  IYDRQVSKQGMSDRVVDDLNPVLNFTRKEVESLLHFVEEE 953


>gi|242018945|ref|XP_002429929.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212514975|gb|EEB17191.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 1234

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/683 (36%), Positives = 382/683 (55%), Gaps = 70/683 (10%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +K I++IL    L   TK+   +E ER++RL       S + K+    +++ + S   
Sbjct: 495  KGRKNIKKILKKESLDINTKQARKMETERKKRL-------SERHKIFEKYSVNSNDSK-- 545

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
                        +++   E  EE + +  ++   LK HQ  G++FMW++  +S+++++  
Sbjct: 546  -----------LVLDFDPETREELLVVDENLVCNLKPHQREGVKFMWDSCFESLKRMEE- 593

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS 809
            D G GCILAH MGLGKT QVI   +T + + N G+++ LI+ P++ + NW +EF  W   
Sbjct: 594  DSGSGCILAHCMGLGKTLQVITLSHTLLTN-NTGVQSILILCPLSTVQNWVKEFYYWLKK 652

Query: 810  ELKPLRVF-MLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICH 868
              K +++F ++   ++  + + +  W+  GGV ++ Y  FR ++  K  K+ N ++ +  
Sbjct: 653  CKKRIKIFEVVTCKTKKLKIKKIKSWKENGGVLIMSYNGFRLMTNNK--KNEN-SKYLTA 709

Query: 869  ALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
             L  GPD++VCDE H++KN ++     + Q+K  RRI LTG+PLQNNL+EY+CMV+FV+ 
Sbjct: 710  FLNPGPDLVVCDEGHLLKNEKSCLALCVSQLKTLRRIVLTGTPLQNNLIEYFCMVEFVKP 769

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
              LG+  EF N F NPI+NGQ  +ST  DV+IM +R+H+L+  ++GF+QR    V+K  L
Sbjct: 770  SILGTKREFMNGFVNPIKNGQFEDSTQSDVRIMKRRAHVLHSLVEGFIQRFGYYVLKSLL 829

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            P K  +VI + L+  Q  LY+ F+  +        N    KS F  +  L +IW HP + 
Sbjct: 830  PEKQEYVIKICLTETQEELYRTFVKNYA-------NFSENKSLFNTFSWLQKIWTHPRV- 881

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
                   +    D   +  D+   + +   +                       N +L E
Sbjct: 882  -------FHHALDTVSNDVDKTSQFAMAFAD----------------------CNKILKE 912

Query: 1109 HTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQG---K 1165
              + E+  SGK+VLL  IL +C   GDK LVFSQ + TL+LIE++L  +     +     
Sbjct: 913  EEFTEIRASGKLVLLFQILKICHQAGDKLLVFSQYLTTLNLIEYFLRFVNDNNNKNDECN 972

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W  G D+YR+DG T S  R    ++FN+  NKR++  LISTRAG LGINL SANRVII 
Sbjct: 973  TWVTGVDYYRIDGTTNSQSRFDYCKKFNDKNNKRLRLLLISTRAGGLGINLVSANRVIIF 1032

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP++DLQ+I+R +R+GQ K  + YR ++  TMEEKIY+RQVTK  LA R++D  Q+
Sbjct: 1033 DVSWNPSHDLQSIFRVYRFGQRKTCYIYRFLSEATMEEKIYQRQVTKLSLAHRIIDEHQI 1092

Query: 1286 HRTISKEEMLHLFEFGDDENPDP 1308
             R  S   +  LF +    NP P
Sbjct: 1093 ERHFSMVNLQELFTY----NPLP 1111


>gi|11870012|gb|AAG40586.1|AF217802_1 xnp/atr-x DNA helicase [Drosophila melanogaster]
          Length = 1311

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 261/739 (35%), Positives = 412/739 (55%), Gaps = 90/739 (12%)

Query: 628  KRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSA 687
            ++ ++K IR+I+   +L   TK     E +R++R++  Q       KL N + +  +   
Sbjct: 376  QKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQ-------KLYNRIFVKSE--- 425

Query: 688  GASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVK 747
              S+E     I   +++   E  +  +++   +  KLK HQV G++FMW+   +++++ +
Sbjct: 426  --SVE-----INELVLDFDEESKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQ 478

Query: 748  SGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKW 806
                G GCILAH MGLGKT QV+   +T +  +   G+   LI++P++ ++NW +EF  W
Sbjct: 479  E-KPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSW 537

Query: 807  -RPSELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 861
             + +    + V+   D+SR +    R   L +W  +GGV ++GY  +R L+  K    R 
Sbjct: 538  MKFANRNDIEVY---DISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRK 594

Query: 862  MARE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 919
              RE +  AL D GPD++VCDE H++KN +   ++A+ +++ +RRI LTG+PLQNNL EY
Sbjct: 595  KQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREY 654

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 979
            YCM+ FV+   LG+  E+ NRF NPI NGQ+T+ST  D+++M  RSHIL++ L+G +QR 
Sbjct: 655  YCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRR 714

Query: 980  DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQA 1037
            D +V+   LPPK  +V+   LS LQ++LY  ++  H    ++   + + K    F  +Q 
Sbjct: 715  DYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTH---REQSGGDVVGKGARLFQDFQD 771

Query: 1038 LAQIWNHPGILQLTKD---------------KGYPSREDAEDSSSDENMDY--------- 1073
            L +IW HP  L++T D               +G+   E  ED ++  + D          
Sbjct: 772  LRRIWTHPMNLRVTSDNVIAKRLLSXDDSDMEGFICDETDEDEAASNSSDSCETFKSDAS 831

Query: 1074 --------NVVIGEKPRNMN----------DFLQGKNDDGFFQKD----WWNDLLHEHTY 1111
                      V   K RN N          + L G       QKD    WW   + E   
Sbjct: 832  MSGLAASSGKVKKRKTRNGNAGGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEEREL 891

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL----- 1166
              + +S K+++LL +L  C  +GDK LVFSQS+ +LD+IE +LS +    K  +      
Sbjct: 892  NNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVG 951

Query: 1167 -----WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                 W  GKD++RLDG     +R+ + ++FN   N R +  LISTRAG LGINL +ANR
Sbjct: 952  DFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANR 1011

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            V+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+Y+RQV K+  A RV+D
Sbjct: 1012 VVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 1071

Query: 1282 RQQVHRTISKEEMLHLFEF 1300
             QQ+ R  ++ +++ L+ +
Sbjct: 1072 EQQISRHYNQTDLMELYSY 1090


>gi|432865863|ref|XP_004070651.1| PREDICTED: helicase ARIP4-like [Oryzias latipes]
          Length = 1504

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 259/683 (37%), Positives = 381/683 (55%), Gaps = 86/683 (12%)

Query: 695  GDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLG 754
             DA    +VN+     E  + +   ++  +K HQ+ GIRF+++N+++S  +  S   G G
Sbjct: 266  ADAQGRVLVNLNHPPSEPDIFLAPQLARAVKPHQIGGIRFLYDNLVESSERFSS-TSGFG 324

Query: 755  CILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW-RPSELKP 813
            CILAH+MGLGKT QVI+F+    R       T L + PVN L NW  EF  W  P+E  P
Sbjct: 325  CILAHSMGLGKTLQVISFIDILFRHTQA--HTVLAIVPVNTLQNWLSEFNTWFPPAEALP 382

Query: 814  ------------LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLS----FGK 855
                         +V +L D  ++   RA+++  W   GGV L+GY  +R LS    FG 
Sbjct: 383  ADTDPSVVTPRRFKVHILNDEHKNTAARAKIVEDWSRDGGVLLMGYEMYRLLSMKKSFGA 442

Query: 856  HVKDRN-------------------MAREICHAL-QDGPDILVCDEAHMIKNTRADTTQA 895
              K RN                   + + +  AL + GPD+++CDE H IKN  A T+QA
Sbjct: 443  GRKKRNKKTPGSDVIDVDEEDKQQELLKGVEKALARPGPDVVICDEGHRIKNCHASTSQA 502

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            LK ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST 
Sbjct: 503  LKSIRTRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCVDSTP 562

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
            +DV++M  RSH+L+  L+GFVQR   +V++  LP K   VI V+LSPLQR LY  F++  
Sbjct: 563  QDVQLMRYRSHVLHSLLEGFVQRRGHDVLRDQLPSKEEHVILVRLSPLQRALYTEFMN-- 620

Query: 1016 GFTNDRVSNEKIRKSFFAGYQAL---------AQIWNHPGIL-QLTKDKGYPSRE--DAE 1063
                      + R++   G+ +L          +IWNHP +L +  + +  P+ +  D +
Sbjct: 621  ----------RFREAGNTGWLSLNPLKAFCVCCKIWNHPDVLYEALQKENLPNEQDLDLD 670

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDF----------LQGKNDDGFFQKDWWNDLLHEHTYKE 1113
            D +S  N        +K +N ++           LQ K +      +W  +++ ++    
Sbjct: 671  DLTSAGNARCPPAPNQKVKNADNPNPNGGPSLAQLQEKANQ-VITLEWAKEIMFDYKPGI 729

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG--------KQGK 1165
            L+ S KMVLL  ++      GDK LVFSQS+ TL +IE +++K P P         +  +
Sbjct: 730  LENSAKMVLLFHLIEESVRNGDKILVFSQSLSTLTVIEDFMAKRPVPPSPLSPSGDRLNQ 789

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
             W +  ++YRLDG T +SER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ 
Sbjct: 790  NWVRNLNYYRLDGSTTASERERLINQFNDPSNTSAWVFLLSTRAGCLGVNLIGANRVVVF 849

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D SWNP +D QA+ R +RYGQ KP   YRL+   T+E+KIY RQ++K+G++ RVVD    
Sbjct: 850  DASWNPCHDAQAVCRVYRYGQRKPCHIYRLVCDFTLEKKIYDRQISKQGMSDRVVDDLNP 909

Query: 1286 HRTISKEEMLHLFEFGDDENPDP 1308
              T ++ E+  L  F ++E PDP
Sbjct: 910  VLTFTRREVESLLHFVEEE-PDP 931


>gi|21356675|ref|NP_651398.1| XNP, isoform B [Drosophila melanogaster]
 gi|24650076|ref|NP_733107.1| XNP, isoform A [Drosophila melanogaster]
 gi|17366808|sp|Q9GQN5.2|ATRX_DROME RecName: Full=Transcriptional regulator ATRX homolog; AltName:
            Full=ATP-dependent helicase XNP; AltName: Full=X-linked
            nuclear protein; AltName: Full=d-xnp; AltName: Full=dXNP
 gi|7301343|gb|AAF56471.1| XNP, isoform A [Drosophila melanogaster]
 gi|16198065|gb|AAL13821.1| LD28477p [Drosophila melanogaster]
 gi|23172300|gb|AAN14055.1| XNP, isoform B [Drosophila melanogaster]
 gi|220947590|gb|ACL86338.1| XNP-PA [synthetic construct]
          Length = 1311

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 260/739 (35%), Positives = 411/739 (55%), Gaps = 90/739 (12%)

Query: 628  KRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSA 687
            ++ ++K IR+I+   +L   TK     E +R++R++  Q       KL N + +  +   
Sbjct: 376  QKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQ-------KLYNRIFVKSE--- 425

Query: 688  GASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVK 747
              S+E     I   +++   E  +  +++   +  KLK HQV G++FMW+   +++++ +
Sbjct: 426  --SVE-----INELVLDFDEESKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQ 478

Query: 748  SGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKW 806
                G GCILAH MGLGKT QV+   +T +  +   G+   LI++P++ ++NW +EF  W
Sbjct: 479  E-KPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSW 537

Query: 807  -RPSELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 861
             + +    + V+   D+SR +    R   L +W  +GGV ++GY  +R L+  K    R 
Sbjct: 538  MKFANRNDIEVY---DISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRK 594

Query: 862  MARE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 919
              RE +  AL D GPD++VCDE H++KN +   ++A+ +++ +RRI LTG+PLQNNL EY
Sbjct: 595  KQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREY 654

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 979
            YCM+ FV+   LG+  E+ NRF NPI NGQ+T+ST  D+++M  RSHIL++ L+G +QR 
Sbjct: 655  YCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRR 714

Query: 980  DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQA 1037
            D +V+   LPPK  +V+   LS LQ++LY  ++  H    ++   + + K    F  +Q 
Sbjct: 715  DYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTH---REQSGGDVVGKGARLFQDFQD 771

Query: 1038 LAQIWNHPGILQLTKD---------------KGYPSREDAEDSSSDENMDY--------- 1073
            L +IW HP  L++  D               +G+   E  ED ++  + D          
Sbjct: 772  LRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDAS 831

Query: 1074 --------NVVIGEKPRNMN----------DFLQGKNDDGFFQKD----WWNDLLHEHTY 1111
                      V   K RN N          + L G       QKD    WW   + E   
Sbjct: 832  MSGLAASSGKVKKRKTRNGNAGGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEEREL 891

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL----- 1166
              + +S K+++LL +L  C  +GDK LVFSQS+ +LD+IE +LS +    K  +      
Sbjct: 892  NNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVG 951

Query: 1167 -----WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                 W  GKD++RLDG     +R+ + ++FN   N R +  LISTRAG LGINL +ANR
Sbjct: 952  DFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANR 1011

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            V+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+Y+RQV K+  A RV+D
Sbjct: 1012 VVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 1071

Query: 1282 RQQVHRTISKEEMLHLFEF 1300
             QQ+ R  ++ +++ L+ +
Sbjct: 1072 EQQISRHYNQTDLMELYSY 1090


>gi|443724535|gb|ELU12495.1| hypothetical protein CAPTEDRAFT_140905 [Capitella teleta]
          Length = 767

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 260/715 (36%), Positives = 386/715 (53%), Gaps = 110/715 (15%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            VNV     E  + +   ++  +K HQV GIRF+++N+++S  +  S   G GCILAH+MG
Sbjct: 36   VNVAHPAEEPDIFLAPQLARAVKPHQVGGIRFLYDNLVESQDRF-SNSNGFGCILAHSMG 94

Query: 763  LGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------------- 809
            LGKT Q+I+F+   +R  N   +T L + PVN L NW  EF  W P+             
Sbjct: 95   LGKTLQLISFMDVFLR--NTDAKTVLCIVPVNTLQNWVSEFNMWLPTAQDLREKFSADVA 152

Query: 810  ---ELKPLRVFMLED--VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAR 864
               + +   +++L D   S   RA +++ WR +GGV L+GY  +R L+  K  +++ + +
Sbjct: 153  PDIQTREFGLYVLNDNLKSNTARAGVVSNWRRQGGVLLMGYEMYRLLT-SKKDRNKELLK 211

Query: 865  EICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMV 923
            E+  AL + GPD++VCDE H IKN+ A  +QALK ++ +RR+ LTG PLQNNL+EY+CMV
Sbjct: 212  ELHEALMRPGPDLVVCDEGHRIKNSHASISQALKNIRTKRRVVLTGYPLQNNLLEYWCMV 271

Query: 924  DFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV 983
            DFVR  +LGS  EF N F+ PI NGQ  +ST +D ++M  R+H+L+  L+GFVQR    V
Sbjct: 272  DFVRPNYLGSKTEFCNMFERPIMNGQCVDSTPQDARLMRFRAHVLHSLLEGFVQRRGHAV 331

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT--NDRVSNEKIRKSFFAGYQALAQI 1041
            ++  LP K  +V+ V++SP+QR LY +F+     T   +  SN  ++      +    +I
Sbjct: 332  LQLALPTKEEYVLLVRMSPIQRTLYSKFMVSMTETGLQNWASNNPLK-----AFSVCCKI 386

Query: 1042 WNHPGILQLTKDK--------------------------------------------GYP 1057
            WNHP +L    ++                                              P
Sbjct: 387  WNHPDVLHRIVEQRKVDDNDLDLEGPMEGEEGKGKKGRGGKAAAKRQGSAAQSAASSPLP 446

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
            S E +   SS  + D  V     P  MND       D     +W  +LL  +    L++ 
Sbjct: 447  S-ETSRPPSSVPDTDTPV-----PSLMND-----KKDQMITFEWAEELLRGYQEGLLEHG 495

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GK+VLL+D++      GDK L+FSQS+ TL+LIE +L +   PG Q + W K + ++RLD
Sbjct: 496  GKLVLLMDLIHQTITNGDKLLIFSQSLFTLNLIEDFLGREYIPGTQER-WFKNRSYFRLD 554

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T   +R+KL+ +FN   N +V   L+STRAG LGINL  ANRV+I D SWNP +D QA
Sbjct: 555  GSTSGLDREKLINQFNAEDNNQVHLFLLSTRAGCLGINLIGANRVVIFDASWNPCHDCQA 614

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
            + R +RYGQ KP + YRL+   T+E+KIY RQ+ K+G++ RVVD       I K+    L
Sbjct: 615  VCRVYRYGQCKPCYVYRLVTDNTLEKKIYDRQINKQGMSDRVVDELNPQHMIRKQADA-L 673

Query: 1298 FEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMESLLGKHH 1352
             E+ D + P              + + NCA         +  +D ++ ++L +HH
Sbjct: 674  LEYEDKDMP--------------TVDANCA---------DMTNDTVLGNVLRRHH 705


>gi|313238286|emb|CBY13372.1| unnamed protein product [Oikopleura dioica]
          Length = 1487

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 262/736 (35%), Positives = 401/736 (54%), Gaps = 97/736 (13%)

Query: 634  KIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEV 693
            K R+I+ D +L EETK     EKER+ RL+ ++ +  S        T+D +         
Sbjct: 563  KSRKIMGDEKLSEETKAAEKAEKERKIRLEKIREERQSSKPGQTFETIDWN--------- 613

Query: 694  LGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRK------VK 747
                       ++ +K E  V++   +   LK HQ+ GI+FMW+ +I+S+ +      + 
Sbjct: 614  ----------GILNKKPE--VKVDEGLKVHLKTHQIDGIQFMWDCVIESVTQKGNEFILG 661

Query: 748  SGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            S  KG GCILAH MGLGKT Q I  ++T      L LR  L++ P+NV  NW  E  KW 
Sbjct: 662  SNQKGHGCILAHCMGLGKTLQSIGIMHTLYTHEFLNLRHFLVLAPLNVCENWAIEVDKWT 721

Query: 808  PSELKPLRVFMLEDVS-RDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--KDRNMAR 864
             S  +PL  + L+       R ++  +W A+GGV ++GY+ FR LS G ++  K + +  
Sbjct: 722  GSLQRPLGCWNLQSSPDYHERLDMCKEWEAEGGVLVLGYSLFRMLSTGANMNRKVKRILP 781

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
            +    L +   ++V DE H +KN+ +  ++A KQ+K  RRI LTG+P+QNNL EY+CM+D
Sbjct: 782  KFKEFLLNKSSLIVADEGHQLKNSESAISKATKQIKTMRRIVLTGTPMQNNLDEYHCMLD 841

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            FVR   LG++ EFRNRF NPI NG+H ++T  DV +M +R+ IL + L G VQR D + +
Sbjct: 842  FVRPNLLGTNKEFRNRFANPIRNGEHIDATDFDVNLMKKRAFILAKSLDGVVQRKDYSYM 901

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
             K LPPK  +V++++L+  Q +LY+ +L ++ F    VS     +  F  +Q    I NH
Sbjct: 902  CKHLPPKHEYVLSLQLTETQIKLYEYYLKVYNFYWP-VSG----RGLFGDFQTFLLINNH 956

Query: 1045 P-GILQLTKD----------KGYPSREDAEDSSSDENM--------DYNVVIGEKPRNMN 1085
            P  +LQ T+             + + + +++ S DE+         D  VV    P++ +
Sbjct: 957  PRALLQQTEQREVREEREELNNFVANDTSDEESEDEDFNAENLDDDDKEVVETPDPKDED 1016

Query: 1086 DF------------------LQGKN--DDGFFQKDWWNDLLHEHTYKELDY-----SGKM 1120
            +                   L   N  D     + W+  +++E      D+     S K+
Sbjct: 1017 ELRALSSLKIRQYILSKAGGLHHMNHADPRDTMRVWYEQVMNESNENTFDWDRAEISIKI 1076

Query: 1121 VLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL---------------SKLPR-PGKQG 1164
              L++I+ +C ++GDK +VFSQS+ +LD IE +L                K+P   G Q 
Sbjct: 1077 NALIEIINICHHLGDKLIVFSQSVISLDTIEGFLHDSTVTKGYDSDDDEPKVPMFVGNQK 1136

Query: 1165 KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
              W K  D++R+DG   +++R   +E FN+  + R +  L+ST+AG +G NL  ANRVII
Sbjct: 1137 --WYKNIDYFRIDGSVTAAKRTTFIESFNDLEDPRARLFLVSTKAGGIGTNLVGANRVII 1194

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
             D SWNP +D+Q+++R +R+GQTK VF YR + HGTMEEKIY+RQV K  L  RVVD QQ
Sbjct: 1195 FDSSWNPAHDVQSLFRVYRFGQTKSVFVYRFVGHGTMEEKIYERQVNKSSLGLRVVDEQQ 1254

Query: 1285 VHRTISKEEMLHLFEF 1300
            V R  S +++  L++F
Sbjct: 1255 VDRHYSADQLKDLYKF 1270



 Score = 84.3 bits (207), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 4/106 (3%)

Query: 490 KFYCTACN---NVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDL 546
           K  CT C    NV    + HP LNV+ C  C         +KD +    +C WCG   DL
Sbjct: 17  KITCTVCGEQINVFGRWNVHPRLNVVQCAPCNKFYNSGRWIKDEEGYYEHCRWCGEGGDL 76

Query: 547 VSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRL 592
           + C  C   FC  C+KRN   A  +  ++A+ W+C CC P  L++L
Sbjct: 77  LGCDECVESFCKKCIKRNFGRA-ETQMIEAAKWKCFCCDPKPLRKL 121


>gi|194908547|ref|XP_001981791.1| GG12244 [Drosophila erecta]
 gi|190656429|gb|EDV53661.1| GG12244 [Drosophila erecta]
          Length = 1277

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 259/739 (35%), Positives = 410/739 (55%), Gaps = 90/739 (12%)

Query: 628  KRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSA 687
            ++ ++K IR+I+   +L   TK     E +R++R++  Q       KL N + +  +   
Sbjct: 343  QKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQ-------KLYNRIFVKSE--- 392

Query: 688  GASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVK 747
              SIE     I   +++   +  +  +++   +  KLK HQV G++FMW+   +++++ +
Sbjct: 393  --SIE-----INELVLDFDEDSKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQ 445

Query: 748  SGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKW 806
                G GCILAH MGLGKT QV+   +T +  +   G+   LI++P++ ++NW +EF  W
Sbjct: 446  E-KPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSW 504

Query: 807  -RPSELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 861
             + +    + V+   D+SR +    R   L +W  +GGV ++GY  +R L+  K    R 
Sbjct: 505  MKFANRNDIEVY---DISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRK 561

Query: 862  MARE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 919
              RE +  AL D GPD++VCDE H++KN +   ++A+ +++ +RRI LTG+PLQNNL EY
Sbjct: 562  KQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREY 621

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 979
            YCM+ FV+   LG+  E+ NRF NPI NGQ+T+ST  D+++M  RSHIL++ L+G +QR 
Sbjct: 622  YCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRR 681

Query: 980  DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQA 1037
            D +V+   LPPK  +V+   LS LQ++LY  ++  H    ++   + + K    F  +Q 
Sbjct: 682  DYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTH---REQSGGDVVGKGARLFQDFQD 738

Query: 1038 LAQIWNHPGILQLTKD---------------KGYPSREDAEDSSSDENMDY--------- 1073
            L +IW HP  L++  D               +G+   E  ED ++  + D          
Sbjct: 739  LRRIWTHPMNLRVNSDNVIAKRLLSNDDSDIEGFICDETDEDEAASNSSDSCESFKSDAS 798

Query: 1074 --------NVVIGEKPRNMNDFLQGKNDDGF----------FQKD----WWNDLLHEHTY 1111
                      V   K RN N      + D             QKD    WW   + E   
Sbjct: 799  MSGLAASSGKVKKRKTRNGNAGGGDSDSDLELLSGLGGGPSVQKDDPSEWWKPFVEEREL 858

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL----- 1166
              + +S K+++LL +L  C  +GDK LVFSQS+ +LD+IE +LS +    K  +      
Sbjct: 859  NNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVG 918

Query: 1167 -----WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                 W  GKD++RLDG     +R+ + ++FN   N R +  LISTRAG LGINL +ANR
Sbjct: 919  DFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNVTNLRARLFLISTRAGGLGINLVAANR 978

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            V+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+Y+RQV K+  A RV+D
Sbjct: 979  VVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 1038

Query: 1282 RQQVHRTISKEEMLHLFEF 1300
             QQ+ R  ++ +++ L+ +
Sbjct: 1039 EQQISRHYNQTDLMELYSY 1057


>gi|195504329|ref|XP_002099032.1| GE10693 [Drosophila yakuba]
 gi|194185133|gb|EDW98744.1| GE10693 [Drosophila yakuba]
          Length = 1312

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 261/739 (35%), Positives = 411/739 (55%), Gaps = 90/739 (12%)

Query: 628  KRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSA 687
            ++ ++K IR+I+   +L   TK     E +R++R++  Q       KL N + +  +   
Sbjct: 377  QKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQ-------KLYNRIFVKSE--- 426

Query: 688  GASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVK 747
              SIE     I   +++   +  +  +++   +  KLK HQV G++FMW+   +++++ +
Sbjct: 427  --SIE-----INELVLDFDEDSKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQ 479

Query: 748  SGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKW 806
                G GCILAH MGLGKT QV+   +T +  +   G+   LI++P++ ++NW +EF  W
Sbjct: 480  E-KPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSW 538

Query: 807  -RPSELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 861
             + +    + V+   D+SR +    R   L +W  +GGV ++GY  +R L+  K    R 
Sbjct: 539  MKFANRNDIEVY---DISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRK 595

Query: 862  MARE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 919
              RE +  AL D GPD++VCDE H++KN +   ++A+ +++ +RRI LTG+PLQNNL EY
Sbjct: 596  KQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREY 655

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 979
            YCM+ FV+   LG+  E+ NRF NPI NGQ+T+ST  D+++M  RSHIL++ L+G +QR 
Sbjct: 656  YCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRR 715

Query: 980  DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQA 1037
            D +V+   LPPK  +V+   LS LQ++LY  ++  H    ++   + + K    F  +Q 
Sbjct: 716  DYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTH---REQSGGDVVGKGARLFQDFQD 772

Query: 1038 LAQIWNHPGILQLTKD---------------KGYPSREDAEDSS------------SDEN 1070
            L +IW HP  L++  D               +G+   E  ED +            SD +
Sbjct: 773  LRRIWTHPMNLRVNSDNVIAKRLLSNDDSDIEGFICDETDEDEAVSNSSDSCESFKSDAS 832

Query: 1071 M-----DYNVVIGEKPRNMNDFLQGKNDDGF----------FQKD----WWNDLLHEHTY 1111
            M         V   K RN N      + D             QKD    WW   + E   
Sbjct: 833  MSGLAASSGKVKKRKTRNGNAGGGDSDSDLELLSGLGGGPSVQKDDPSEWWKPFVEEREL 892

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL----- 1166
              + +S K+++LL +L  C  +GDK LVFSQS+ +LD+IE +LS +    K  +      
Sbjct: 893  NNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVG 952

Query: 1167 -----WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                 W  GKD++RLDG     +R+ + ++FN   N R +  LISTRAG LGINL +ANR
Sbjct: 953  DFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNVTNLRARLFLISTRAGGLGINLVAANR 1012

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            V+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+Y+RQV K+  A RV+D
Sbjct: 1013 VVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 1072

Query: 1282 RQQVHRTISKEEMLHLFEF 1300
             QQ+ R  ++ +++ L+ +
Sbjct: 1073 EQQISRHYNQTDLMELYSY 1091


>gi|241707025|ref|XP_002412008.1| steroid receptor-interacting snf2 domain protein, putative [Ixodes
            scapularis]
 gi|215505018|gb|EEC14512.1| steroid receptor-interacting snf2 domain protein, putative [Ixodes
            scapularis]
          Length = 1055

 Score =  434 bits (1117), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 249/676 (36%), Positives = 379/676 (56%), Gaps = 79/676 (11%)

Query: 695  GDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLG 754
            G  +   +VNV     +  V +   ++  +K HQ+ GIRF+++N+++S+ +  +   G G
Sbjct: 106  GLGMCRVLVNVGHPPEDPDVFLAPQLAPLVKPHQIGGIRFLFDNVVESVGRFDT-SSGFG 164

Query: 755  CILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS-ELKP 813
            CILAH+MGLGKT QV++F+   +R  + G +  L +TP+N + NW  EF KW P+ E+ P
Sbjct: 165  CILAHSMGLGKTLQVVSFVDVLLR--HTGAKKVLCITPINTIQNWLAEFDKWVPAPEVAP 222

Query: 814  -------LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGK--------- 855
                     V++L D+ R    RA+L+  W  KGGV L+GY  +R L+  K         
Sbjct: 223  TSVRPRSYHVYLLNDMYRSTPARADLILDWHNKGGVLLMGYEMYRMLALKKVSRPSKRRR 282

Query: 856  -------HVKDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIAL 907
                     +   + +++  AL   GPD+++CDE H IKN  A T+ ALK ++ +RRI L
Sbjct: 283  RKEEPEDDSRHSQLLQDVYQALVNPGPDLVICDEGHRIKNCNASTSAALKSIRTKRRIVL 342

Query: 908  TGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHI 967
            TG PLQNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D ++M  R+H+
Sbjct: 343  TGYPLQNNLLEYWCMVDFVRPSYLGTRSEFCNMFERPIQNGQCLDSTPKDRQLMRFRAHV 402

Query: 968  LYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD--LHGFTNDRVSNE 1025
            L+  L+GFVQR    V++  LP K   V+ ++++P+QR LY+ F+   LH   N R +N 
Sbjct: 403  LHSLLQGFVQRRGHAVLRDALPRKEEHVLLIRMTPIQRTLYREFVKEFLH---NYRATNP 459

Query: 1026 KIRKSFFAGYQALAQIWNHPGIL-QLTKDK-----------------------------G 1055
                 FFA      ++WNHP IL  L +DK                             G
Sbjct: 460  ---LKFFA---VCCKVWNHPDILFHLVQDKKSEGALDIDLDIDLLAPPGSKDPMGTRGTG 513

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGK-NDDGFFQKDWWNDLLHEHTYKEL 1114
             P   D  D+      + + +    P+   +    +   D     +W   LL ++   +L
Sbjct: 514  QPG-VDPSDNPYPFAAETSGMCARAPKYPPEPAAFREKSDNNISYEWAYPLLEQYQPDQL 572

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPG-KQGKLWKKG 1170
            + S K ++L+ IL     +GDK LVFSQS+ TLDL+E +L +  +P RPG   G  W +G
Sbjct: 573  ENSHKFLVLMTILEQTLGVGDKLLVFSQSLSTLDLVERFLGQREVPLRPGLPHGDKWARG 632

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
            ++++RLDG T + ER+KL+  +N   N  V   L+STRAG LGINL  ANR++++D SWN
Sbjct: 633  RNYFRLDGSTSAQEREKLINEYNA--NAGVSLFLLSTRAGCLGINLTGANRIVVLDASWN 690

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTIS 1290
            P +D QA+ R +RYGQ KP   YRL+    +E++IY RQV K+G++ RVVD       ++
Sbjct: 691  PCHDAQAVCRIYRYGQAKPCHIYRLVCDNCLEKRIYDRQVNKQGMSDRVVDEMNPEANLT 750

Query: 1291 KEEMLHLFEFGDDENP 1306
             +++  L +  +D+ P
Sbjct: 751  WKDVSTLVQDNEDDPP 766


>gi|198455069|ref|XP_001359844.2| GA18248 [Drosophila pseudoobscura pseudoobscura]
 gi|198133079|gb|EAL28996.2| GA18248 [Drosophila pseudoobscura pseudoobscura]
          Length = 1506

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/635 (37%), Positives = 364/635 (57%), Gaps = 63/635 (9%)

Query: 723  KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 782
            KLK HQV G++FMW+   ++++  +    G GCILAH MGLGKT QV+   +T + +   
Sbjct: 645  KLKPHQVEGVKFMWDACFETLKDSEE-KPGSGCILAHCMGLGKTLQVVTLTHTLLMNRRT 703

Query: 783  GLRTALIVTPVNVLHNWKQEFMKW-RPSELKPLRVFMLEDVSRDR----RAELLAKWRAK 837
            G+   L++TP++ ++NW +EF+ W + +  K + V+   D+SR +    R   LA+W  +
Sbjct: 704  GVERVLVITPLSTVNNWAREFLYWMKFANRKDIEVY---DISRYKDKPTRIFKLAEWFNE 760

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMARE-ICHAL-QDGPDILVCDEAHMIKNTRADTTQA 895
            GGV ++GY  +R L+  K    R   RE +  AL + GPD++VCDE H++KN +   ++A
Sbjct: 761  GGVCILGYDMYRILANEKAKGLRKKQREQLLQALVEPGPDLVVCDEGHLLKNEKTSISKA 820

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            + +++ +RRI LTG+PLQNNL EYYCM+ FV+   LG+  E+ NRF NPI NGQ+T+ST 
Sbjct: 821  VTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPSLLGTYKEYMNRFVNPISNGQYTDSTE 880

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
             D+++M  RSHIL++ L+G +QR D +V+   LPPK  +VI   LS LQ+ LY  ++  +
Sbjct: 881  RDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVIYTTLSELQQTLYGYYMTTY 940

Query: 1016 GFTNDR-VSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS-------- 1066
               N   +  +  R   F  +Q L +IW HP  L++  D     R  + D S        
Sbjct: 941  REQNSSDICGKGAR--LFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSNDDSDIEGFICD 998

Query: 1067 --------------------SDENMDYNVVIGEKPRNMNDFLQGKNDD-------GFFQK 1099
                                SD +M       +K +  N      + D          QK
Sbjct: 999  ETEEEEAADSNSSDSCESFKSDASMSGARKSTKKHKTRNRAGADSDSDLEMLPSGPLAQK 1058

Query: 1100 D----WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLS 1155
            D    WW   + E     +++S K+++LL +L  C  +GDK LVFSQS+ +LD+IE +LS
Sbjct: 1059 DDPSEWWKPFVEERELNNVNHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLS 1118

Query: 1156 KLPRPGKQGKL----------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
             +    K  +           W  GKD++RLDG     +R+ + + FN   N R +  LI
Sbjct: 1119 LVDSNTKNYEFEGDVGEFKGCWTNGKDYFRLDGSCSVEQREAMCKTFNNVANLRARLFLI 1178

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            STRAG LGINL +ANRV+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+
Sbjct: 1179 STRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQVKPCYIYRLIAMGTMEQKV 1238

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            Y+RQV K+  A RV+D QQ+ R  ++ ++  L+ +
Sbjct: 1239 YERQVAKQATAKRVIDEQQISRHYNQTDLTELYSY 1273


>gi|195445442|ref|XP_002070326.1| GK12000 [Drosophila willistoni]
 gi|194166411|gb|EDW81312.1| GK12000 [Drosophila willistoni]
          Length = 1352

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 261/737 (35%), Positives = 411/737 (55%), Gaps = 92/737 (12%)

Query: 632  KKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASI 691
            +K IR+I+   +L   TK     E +R++R++  Q       KL N +          ++
Sbjct: 411  RKHIRKIIKTKDLDVSTKEAAKEEDDRRKRIEERQ-------KLYNRI-----FEKSENV 458

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK 751
            E     I+  I++   +     +++   +  KLK HQV G++FMW+   ++++  +    
Sbjct: 459  E-----ISELILDFDEDSKRALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKDTEE-KP 512

Query: 752  GLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKWRP-S 809
            G GCILAH MGLGKT QV+   +T +  +   G+   L++TP++ ++NW +EF+ W   +
Sbjct: 513  GSGCILAHCMGLGKTLQVVTLTHTLLINTRRTGIERVLVITPLSTVNNWAREFVHWMNFA 572

Query: 810  ELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE 865
              K + V+   D+SR +    R   L +W  +GGV ++GY  +R L+  K    R   RE
Sbjct: 573  NRKDIEVY---DISRYKDKPTRIFKLNEWYEEGGVCILGYDMYRILANEKAKGVRKKQRE 629

Query: 866  -ICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMV 923
             +  AL + GPD++VCDE H++KN +   ++A+ +++ +RRI LTG+PLQNNL EYYCM+
Sbjct: 630  QLQQALVEPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLKEYYCMI 689

Query: 924  DFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV 983
             FV+   LG+  E+ NRF NPI NGQ+T+ST  D+++M  RSHIL+  L+G +QR D +V
Sbjct: 690  QFVKPNLLGTYKEYMNRFVNPISNGQYTDSTERDLRLMKHRSHILHTLLEGCIQRRDYSV 749

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQALAQI 1041
            +   LPPK  +VI   LS LQ++LY  ++  H    D+ S++   K    F  +Q L +I
Sbjct: 750  LAPYLPPKHEYVIYTTLSELQQQLYGYYMTTH---RDQSSSDICGKGARLFQDFQDLRRI 806

Query: 1042 WNHPGILQLTKD---------------KGYPSREDAED------SSSDENMDYNV----- 1075
            W HP  L++  D               +G+   E  E+      S SDE+   +      
Sbjct: 807  WTHPMNLRVNSDNVIAKRLLSNDDSDIEGFICDESEEEAVASNSSDSDESFKSDASMPGG 866

Query: 1076 ---------VIGEKPRN--MNDFLQGKNDDGF-------FQKD----WWNDLLHEHTYKE 1113
                     V   K RN   +  +   +D  +        QKD    WW   + E     
Sbjct: 867  MPGVSGGGKVKKRKTRNGVRSGLVDSDSDVEYTGIGSTPVQKDDPSEWWKPFVEERELNN 926

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK----QGKL--- 1166
            +++S K+++LL +L  C  +GDK LVFSQS+ +LD+IE +LS +    K    +G +   
Sbjct: 927  VNHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKGYDFEGDVGNF 986

Query: 1167 ---WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
               W  G+D++RLDG     +R+ + ++FN   N + +  LISTRAG LGINL +ANRV+
Sbjct: 987  KGCWTPGEDYFRLDGSCSVEQREAMCKKFNNAANLKARLFLISTRAGGLGINLVAANRVV 1046

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+Y+RQV K   A RV+D Q
Sbjct: 1047 IFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKLATAKRVIDEQ 1106

Query: 1284 QVHRTISKEEMLHLFEF 1300
            Q+ R  ++ +++ L+ +
Sbjct: 1107 QISRHYNQTDLMELYTY 1123


>gi|195157502|ref|XP_002019635.1| GL12501 [Drosophila persimilis]
 gi|194116226|gb|EDW38269.1| GL12501 [Drosophila persimilis]
          Length = 1502

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/635 (37%), Positives = 363/635 (57%), Gaps = 63/635 (9%)

Query: 723  KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 782
            KLK HQV G++FMW+   ++++  +    G GCILAH MGLGKT QV+   +T + +   
Sbjct: 641  KLKPHQVEGVKFMWDACFETLKDSEE-KPGSGCILAHCMGLGKTLQVVTLTHTLLMNRRT 699

Query: 783  GLRTALIVTPVNVLHNWKQEFMKW-RPSELKPLRVFMLEDVSRDR----RAELLAKWRAK 837
            G+   L++TP++ ++NW +EF+ W + +  K + V+   D+SR +    R   L +W  +
Sbjct: 700  GVERVLVITPLSTVNNWAREFLYWMKFANRKDIEVY---DISRYKDKPTRIFKLTEWFNE 756

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMARE-ICHAL-QDGPDILVCDEAHMIKNTRADTTQA 895
            GGV ++GY  +R L+  K    R   RE +  AL + GPD++VCDE H++KN +   ++A
Sbjct: 757  GGVCILGYDMYRILANEKAKGLRKKQREQLLQALVEPGPDLVVCDEGHLLKNEKTSISKA 816

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            + +++ +RRI LTG+PLQNNL EYYCM+ FV+   LG+  E+ NRF NPI NGQ+T+ST 
Sbjct: 817  VTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPSLLGTYKEYMNRFVNPISNGQYTDSTE 876

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
             D+++M  RSHIL++ L+G +QR D +V+   LPPK  +VI   LS LQ+ LY  ++  +
Sbjct: 877  RDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVIYTTLSELQQTLYGYYMTTY 936

Query: 1016 GFTNDR-VSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS-------- 1066
               N   +  +  R   F  +Q L +IW HP  L++  D     R  + D S        
Sbjct: 937  REQNSSDICGKGAR--LFQDFQDLRRIWTHPMNLRVNSDNVIAKRLLSNDDSDIEGFICD 994

Query: 1067 --------------------SDENMDYNVVIGEKPRNMNDFLQGKNDD-------GFFQK 1099
                                SD +M       +K +  N      + D          QK
Sbjct: 995  ETEEEEAADSNSSDSCESFKSDASMSGARKSTKKHKTRNRAGADSDSDLEMLPSGPLAQK 1054

Query: 1100 D----WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLS 1155
            D    WW   + E     +++S K+++LL +L  C  +GDK LVFSQS+ +LD+IE +LS
Sbjct: 1055 DDPSEWWKPFVEERELNNVNHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLS 1114

Query: 1156 KLPRPGKQGKL----------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
             +    K  +           W  GKD++RLDG     +R+ + + FN   N R +  LI
Sbjct: 1115 LVDSNTKNYEFEGDVGEFKGCWTNGKDYFRLDGSCSVEQREAMCKTFNNVANLRARLFLI 1174

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            STRAG LGINL +ANRV+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+
Sbjct: 1175 STRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQVKPCYIYRLIAMGTMEQKV 1234

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            Y+RQV K+  A RV+D QQ+ R  ++ ++  L+ +
Sbjct: 1235 YERQVAKQATAKRVIDEQQISRHYNQTDLTELYSY 1269


>gi|158288154|ref|XP_310015.4| AGAP009344-PA [Anopheles gambiae str. PEST]
 gi|157019247|gb|EAA05751.4| AGAP009344-PA [Anopheles gambiae str. PEST]
          Length = 961

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 267/756 (35%), Positives = 402/756 (53%), Gaps = 119/756 (15%)

Query: 629  RKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAG 688
            ++ K++IR +L + EL EETK+    E+ R  RLK    Q     K + S      L   
Sbjct: 149  KEPKRRIRAMLTNDELAEETKKAQKEEEGRTARLKKKHEQLK---KFLASY-----LPGP 200

Query: 689  ASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKS 748
               E++ D       + VR+   +A+ +   I   LK HQ+ GI+FM++N   S+  +  
Sbjct: 201  GESELVLD------YDSVRK---QAICVHPEIVKLLKPHQIEGIKFMYDNTYGSVDALPK 251

Query: 749  GDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP 808
               G GCILAH MGLGKT Q+I+ L+T MR   L     L++ P + + NWK+E  +W+ 
Sbjct: 252  -HSGSGCILAHCMGLGKTLQMISLLHTVMRYPQLMTNRVLVICPKSTVMNWKEEIARWQG 310

Query: 809  S--ELKPLRVFMLEDV-SRDRRAELLAKW----RAKGGVFLIGYTAFRNL--------SF 853
            +      ++V+   DV +++ +  +L +W        GV LIGY AFR L        S 
Sbjct: 311  TIRTGYQMKVYCFPDVCTQNDKIGVLKRWYYCKSPNCGVMLIGYEAFRALINYERRKGSV 370

Query: 854  GKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQ 913
            G       + +E  + L  G D+++CDE H IKN R+  ++A+ ++K +RRI LTG+P+Q
Sbjct: 371  GLRSAKLGLIKE--YLLNPGADLVICDEGHQIKNKRSAISEAVSKIKTRRRIMLTGTPIQ 428

Query: 914  NNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLK 973
            NNL EYYCMV+F++  FLGS  EF N + NPI+NGQ  +S  + +KIM QRS++L+ +L 
Sbjct: 429  NNLKEYYCMVNFIKPSFLGSDKEFSNLYANPIKNGQCKDSDHQSIKIMKQRSYVLHNKLS 488

Query: 974  GFVQRMDMNVVKKDLPPKTVFVITVKLSP------------------------------- 1002
             FVQR +  V+K+ LP K  +V+ V L+P                               
Sbjct: 489  KFVQRKEAAVLKEFLPEKFEYVLFVPLTPVQVSPAAIVRAEGTETESSGRIQHRKPVNVY 548

Query: 1003 -----------LQRRLYKRFLDLHGFTNDRVSNEKIRKSFF---AGYQALAQ-------I 1041
                       +Q ++Y+ FL ++ +TN+ V+ E  R   F   A Y +L +       I
Sbjct: 549  RNANPYNDFFHIQEKMYEVFLQMNDYTNNDVTGEPGRTKKFKLIADYTSLRKVIGTRLSI 608

Query: 1042 WNHPGILQ-------LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDD 1094
            W HP +L+       L K++   +R+ A   S DE+ D +          ND   G+   
Sbjct: 609  WTHPKVLEKAWESANLEKNRRDAARKTATPDSDDESPDDH----------NDIKSGQLS- 657

Query: 1095 GFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL 1154
                 DWW   L     + L  S K+ +L +IL  C+  G+K L+F+  +  L+++E ++
Sbjct: 658  --VTNDWWRQYLQIADLESLFPSNKLWILFEILKHCNERGEKVLIFTAFVSVLNMVEHFM 715

Query: 1155 SKLPRPGKQGKL------------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKC 1202
            +K+    +  +L            W+ GKD+YRLDG+T+ S R +++  FN+P NKR KC
Sbjct: 716  AKIHHQEENPQLSDAYAYSAFKGPWEPGKDYYRLDGKTQKSIRHQMITSFNDPQNKRTKC 775

Query: 1203 TLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTME 1262
             LIS +AG  GINL  ANRVII+D SWNP+ D Q I+R +R GQ +  + YRL+A GTME
Sbjct: 776  FLISAKAGGQGINLTGANRVIILDTSWNPSNDQQNIFRIFRLGQKRKCYVYRLIAAGTME 835

Query: 1263 EKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLF 1298
            EK+Y R VTK+ L+ RVVD QQ+ R  S  E+  L+
Sbjct: 836  EKVYSRSVTKQALSFRVVDEQQIDRHYSYGELAELY 871


>gi|391336651|ref|XP_003742692.1| PREDICTED: helicase ARIP4-like [Metaseiulus occidentalis]
          Length = 1850

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 254/661 (38%), Positives = 361/661 (54%), Gaps = 96/661 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            ++NV     EE + I   ++  +K HQ+ G+RF++EN+I+S  + K    G GCILAH+M
Sbjct: 758  LINVGHPDDEEDIFIAPQLAHIIKPHQINGVRFLYENVIESASRFKVS-SGFGCILAHSM 816

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE----------- 810
            GLGKT QVI F    +R      R  LI+TP+N + NW  EF KW P E           
Sbjct: 817  GLGKTIQVITFTDLFLRHTTG--RKVLIITPINTIQNWLAEFDKWLPKEDQVYVTLINEG 874

Query: 811  -LKP--LRVFMLEDVSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVK------- 858
             ++P    VF+L +  +    R  ++ +W  KGGV L+GY  +R L+  K  K       
Sbjct: 875  HVRPRSFPVFLLNESYKTASARHRIVREWHDKGGVMLMGYEMYRTLALKKVYKPKGRKKA 934

Query: 859  -----------DRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIA 906
                       DR +  E+  AL   GPD++VCDE H IKN  A T+ ALK +K +RR+ 
Sbjct: 935  TVQATEEIMRKDRELLEEVYEALVNPGPDLVVCDEGHRIKNCNATTSSALKDIKTKRRVV 994

Query: 907  LTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSH 966
            LTG PLQNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D ++M  R+H
Sbjct: 995  LTGYPLQNNLIEYWCMVDFVRPSYLGTKMEFTNMFERPIQNGQCVDSTPKDRQLMKFRAH 1054

Query: 967  ILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNE- 1025
            +L+  L GFVQR    V+K  LP K   V  ++++P+QR LY   +     TN   +N  
Sbjct: 1055 VLHSLLTGFVQRRGHGVLKDALPHKEEHVFFIRMTPIQRALYTALVK-EFVTNSESANPL 1113

Query: 1026 KIRKSFFAGYQALAQIWNHPGIL-QLTKD-KGYPSRE----DAEDSSSDENMDYNVVIGE 1079
            KI       +    +IWNHP IL  L +D KG P       D +D +++  +  + + G 
Sbjct: 1114 KI-------FAVCCKIWNHPDILYNLVRDKKGLPPTAVMDLDIDDGAAE--VGESGLNGL 1164

Query: 1080 KPRNMNDFLQGKNDDG-----------------------FFQK------------DWWND 1104
              R  ++  +G + DG                        F K            +W  +
Sbjct: 1165 GSRKRDELGEGGDPDGEEDPSKKKRKRGKKKDAATPTPEQFPKPVNEDELNKISYEWAYE 1224

Query: 1105 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK---LPRPG 1161
            L+ ++   ++  S KMVLL+++L      GDK LVFSQS+ TLDL+E +L      PRPG
Sbjct: 1225 LMADYKADDITNSYKMVLLMEVLDSSLREGDKLLVFSQSLLTLDLVERFLQMRDLPPRPG 1284

Query: 1162 -KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
                  W K + ++RLDG T   ER+KL+  FN   N  V   L+STRAG LGINL  AN
Sbjct: 1285 LNYTDKWVKNRTYFRLDGGTSGQEREKLINDFNH--NPCVALFLLSTRAGCLGINLIGAN 1342

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R++++D SWNP +D QA+ R +RYGQ KP + YR +   ++E++IY RQV K+G++ RVV
Sbjct: 1343 RIVVLDASWNPCHDAQAVCRVYRYGQQKPCYIYRFVCDNSLEKRIYDRQVNKQGMSDRVV 1402

Query: 1281 D 1281
            D
Sbjct: 1403 D 1403


>gi|358418184|ref|XP_003583861.1| PREDICTED: LOW QUALITY PROTEIN: helicase ARIP4-like [Bos taurus]
          Length = 1428

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 256/663 (38%), Positives = 374/663 (56%), Gaps = 69/663 (10%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 244  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 302

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 303  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 360

Query: 807  --RPSELKP--LRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNM 862
              +P E++P   +V +L D       E   K R +    +I           +  + +  
Sbjct: 361  DSKPEEVQPRFFKVHILND-------EHKXKARKRSHPVII--------DLDEEDRQQEF 405

Query: 863  AREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 921
             RE   AL + GPD+++CDE H IKN +A T+QALK ++ +RR+ LTG PLQNNL+EY+C
Sbjct: 406  RREFEKALCRPGPDVVICDEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWC 465

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 981
            MVDFVR  FLG+  EF N F+ PI NGQ  +ST +DV++M  RSH+L+  L+GFVQR   
Sbjct: 466  MVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGH 525

Query: 982  NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
             V+K  LP K   VI V+LS +QR LY +F+D      D  ++  +  +    +    +I
Sbjct: 526  TVLKIHLPAKEENVILVRLSQIQRDLYTQFMDRF---RDCGNSGWLGLNPLKAFCVCCKI 582

Query: 1042 WNHPGILQLTKDKGYPSRE---DAEDSSSD---------------ENMDYNVVIGEKPRN 1083
            WNHP +L     K   + E   D E+  S                E+      +GE    
Sbjct: 583  WNHPDVLYEALQKENLANEQDLDVEELGSAGTSARCPSQGTKGKVEDSALASSMGEA--T 640

Query: 1084 MNDFLQGKNDDGFFQK-------DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDK 1136
             + FLQG   + F ++       +W  DLL  +    L+ S KMVLL  ++     +GDK
Sbjct: 641  NSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDK 700

Query: 1137 SLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---KLWKKGKDWYRLDGRTESSERQKLVE 1190
             LVFSQS+ TL LIE +L K  +P  PG +G   + W +   ++RLDG T + ER++L+ 
Sbjct: 701  ILVFSQSLSTLALIEEFLGKREVPCLPGAEGQGVQKWIRNVSYFRLDGSTPAFERERLIN 760

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
            +FN+P N      L+STRAG LG+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP 
Sbjct: 761  QFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPC 820

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLT 1310
              YRL+A  T+E+KIY RQ++K+G++ RVVD        +++E+ +L  F + E P P T
Sbjct: 821  HIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQT 879

Query: 1311 AVS 1313
            +++
Sbjct: 880  SLN 882


>gi|158290917|ref|XP_312449.4| AGAP002490-PA [Anopheles gambiae str. PEST]
 gi|157018127|gb|EAA08205.4| AGAP002490-PA [Anopheles gambiae str. PEST]
          Length = 881

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/629 (38%), Positives = 348/629 (55%), Gaps = 75/629 (11%)

Query: 761  MGLGKTFQVIAFLYTAMRSVNL-GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML 819
            MGLGKT QV+   +T + S +L G+   L+V P++ + NW  EF  W     K   V + 
Sbjct: 1    MGLGKTLQVVTLAHTLLASADLTGVERILVVCPLSTVLNWANEFHMWMKHVKKGTEVEVY 60

Query: 820  EDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA--LQDG 873
            E +S+ +    RA  L +W  +GGV ++GY  FRNL+     + R   RE      +  G
Sbjct: 61   E-ISKYKDNVTRANKLMEWHNEGGVMIMGYDMFRNLANPTATRIRKKVRESLQTSLIDPG 119

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
            P+++VCDE H++KN +   +QA+ ++   RRI LTG+P+QNN+ EYYCMV FV+   LG+
Sbjct: 120  PELIVCDEGHLLKNEKTSLSQAVNRISTMRRIVLTGTPIQNNMKEYYCMVQFVKPKLLGT 179

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
              E+ NRF NPI NGQ+T+ST  D+++M +R+H+L++ L G VQR D  V+   LPPK  
Sbjct: 180  YTEYMNRFVNPITNGQYTDSTPYDIQLMRKRAHVLHKLLDGCVQRRDYAVLAPFLPPKLE 239

Query: 994  FVITVKLSPLQRRLYKRFL-DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
            FV+++KL+PLQ  LYK ++ ++ G  ND     K     F  +Q L +IW HP +L+   
Sbjct: 240  FVVSIKLTPLQSTLYKYYMENMAGKRNDDDPTLKRSSMLFNDFQNLQRIWTHPRVLRYNS 299

Query: 1053 DK--------------------------------GYPSREDAE--------DSSSD---- 1068
            D+                                  P+  D+E        DSS D    
Sbjct: 300  DRYEIKQQRKRDLDSENESEGSMKDFIDDEDTAESTPASSDSESDVQSVHDDSSRDAKSS 359

Query: 1069 ----ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-----DWWNDLLHEHTYKELDYSGK 1119
                 N     V     RN  +F  G +DD   QK     +WW  +  E     L++SGK
Sbjct: 360  GDSTSNKRKATVGTRSTRNNPNFNGGDDDDVIMQKPENPTEWWMQMCPETELDNLEHSGK 419

Query: 1120 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL------------PRPGKQGKLW 1167
            +V+L++IL  C  +GDK LVFSQS+ +LD+IE +LS L             +  K    W
Sbjct: 420  LVVLMEILKECEAIGDKLLVFSQSLYSLDVIEHFLSLLDENLQKDEDERDEQLSKYPGSW 479

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
              G D++RLDG T    R    + FN+  N R +  LISTRAG LGINL +ANRV+I D 
Sbjct: 480  SLGLDYFRLDGSTSIDNRNDACKVFNDESNTRARLFLISTRAGGLGINLVAANRVVIFDV 539

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            SWNP++D+Q+I+R +R+GQ+KP + YR +A GTMEEKIY+RQVTK+ ++ RV+D QQ+ R
Sbjct: 540  SWNPSHDIQSIFRVYRFGQSKPCYIYRFIAMGTMEEKIYERQVTKQAISKRVIDEQQIDR 599

Query: 1288 TISKEEMLHLFEFG-DDENPDPLTAVSKE 1315
               + ++  L+ +  +   P P   V K+
Sbjct: 600  HYKENDLQELYRYEVETSEPRPTPNVPKD 628


>gi|156358635|ref|XP_001624622.1| predicted protein [Nematostella vectensis]
 gi|156211413|gb|EDO32522.1| predicted protein [Nematostella vectensis]
          Length = 659

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/609 (38%), Positives = 348/609 (57%), Gaps = 65/609 (10%)

Query: 728  QVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTA 787
            Q+ GIRF+++N+I+++ +      G GCILAH MGLGKT QV+AF+   +R      +  
Sbjct: 1    QIGGIRFLYDNLIETLARCNI-SAGFGCILAHCMGLGKTLQVVAFVDIFLRHTTA--KKV 57

Query: 788  LIVTPVNVLHNWKQEFMKW---RPSE---------------LKPLRVFMLEDVSRDR--R 827
            L + P+N + NW  EF  W   +PSE                +  +VF+L D  +    R
Sbjct: 58   LCIVPINTIQNWLSEFNSWLPGKPSEEMSENGEPIRDYNVRYREFKVFLLGDNQKSTVAR 117

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN--MAREICHALQDGPDILVCDEAHMI 885
            A+++ +W   GGV LIGY  +R L+        N  + + +C   + GPD+++CDE H I
Sbjct: 118  AKVIGEWNESGGVLLIGYELYRILALSTPCMASNKCIQKALC---KPGPDLVICDEGHRI 174

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN +A+ + ALK++K +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+ HEF N F+ PI
Sbjct: 175  KNNQANISHALKKIKTRRRVVLTGYPLQNNLVEYWCMVDFVRPNFLGNRHEFSNMFERPI 234

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
             NGQ  +ST  D+K+M  R+H+L+  L+GFVQR   +V+ K LPPK   VI V +S +Q 
Sbjct: 235  MNGQCCDSTPADMKLMRFRAHVLHSLLEGFVQRRSQSVLMKALPPKNEHVILVNMSSIQS 294

Query: 1006 RLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK----------- 1054
            +LYK ++D    +   ++  K       G+    +IWNHP I   T +            
Sbjct: 295  QLYKAYIDYLLKSVGHLNPIK-------GFHTCMKIWNHPDIFFSTLEGKTDSQRNDSPL 347

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
              P +ED+    +      +  + + P              F   DW   ++  +     
Sbjct: 348  TLPDQEDSNSGLASSLPSSSQSVDQTPI-------------FSNLDWAKQIMRNYKPFIA 394

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQ---GKLWK 1168
            +  GKMVLL +I+     +G+K L+FSQS+ TL +IE +L+   +P  PG+Q      W 
Sbjct: 395  EQGGKMVLLFEIIEESLKLGEKILIFSQSLSTLSIIEEFLNSRVVPFFPGRQSDPSTKWA 454

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            + K ++RLDG T + ER++L+  FN+  +  V   ++STRAG LG+NL  A+RV++ D S
Sbjct: 455  RNKSYFRLDGSTSAQERERLINAFNDNSSNEVLLFMLSTRAGCLGVNLVGASRVVVFDSS 514

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT 1288
            WNP +D+QA+ R +RYGQ +P   YRL+A GTME+KIY RQV+K+G+A RVVD       
Sbjct: 515  WNPCHDVQAVCRVYRYGQVRPCHIYRLIATGTMEKKIYDRQVSKQGVANRVVDELNPEAN 574

Query: 1289 ISKEEMLHL 1297
             +K+E++ L
Sbjct: 575  FTKQEIMSL 583


>gi|359078350|ref|XP_003587697.1| PREDICTED: LOW QUALITY PROTEIN: helicase ARIP4-like [Bos taurus]
          Length = 1422

 Score =  425 bits (1092), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 252/660 (38%), Positives = 374/660 (56%), Gaps = 69/660 (10%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 244  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 302

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 303  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 360

Query: 807  --RPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAR 864
              +P E++P R F +  ++ + +    ++           Y A + L   +    R   +
Sbjct: 361  DSKPEEVQP-RFFKVHILNDEHKXFFNSQ----------SYVAQKFLYSAR----RQFEK 405

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
             +C   + GPD+++CDE H IKN +A T+QALK ++ +RR+ LTG PLQNNL+EY+CMVD
Sbjct: 406  ALC---RPGPDVVICDEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVD 462

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            FVR  FLG+  EF N F+ PI NGQ  +ST +DV++M  RSH+L+  L+GFVQR    V+
Sbjct: 463  FVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVL 522

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            K  LP K   VI V+LS +QR LY +F+D      D  ++  +  +    +    +IWNH
Sbjct: 523  KIHLPAKEENVILVRLSQIQRDLYTQFMDRF---RDCGNSGWLGLNPLKAFCVCCKIWNH 579

Query: 1045 PGILQLTKDKGYPSRE---DAEDSSSD---------------ENMDYNVVIGEKPRNMND 1086
            P +L     K   + E   D E+  S                E+      +GE     + 
Sbjct: 580  PDVLYEALQKENLANEQDLDVEELGSAGTSARCPSQGTKGKVEDSALASSMGEA--TNSK 637

Query: 1087 FLQGKNDDGFFQK-------DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLV 1139
            FLQG   + F ++       +W  DLL  +    L+ S KMVLL  ++     +GDK LV
Sbjct: 638  FLQGVGFNPFQERGNNIVTYEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILV 697

Query: 1140 FSQSIPTLDLIEFYLSK--LP-RPGKQG---KLWKKGKDWYRLDGRTESSERQKLVERFN 1193
            FSQS+ TL LIE +L K  +P  PG +G   + W +   ++RLDG T + ER++L+ +FN
Sbjct: 698  FSQSLSTLALIEEFLGKREVPCLPGAEGQGVQKWIRNVSYFRLDGSTPAFERERLINQFN 757

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
            +P N      L+STRAG LG+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP   Y
Sbjct: 758  DPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCHIY 817

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVS 1313
            RL+A  T+E+KIY RQ++K+G++ RVVD        +++E+ +L  F + E P P T+++
Sbjct: 818  RLVADFTLEKKIYDRQISKQGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQTSLN 876


>gi|321471114|gb|EFX82087.1| hypothetical protein DAPPUDRAFT_101480 [Daphnia pulex]
          Length = 821

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/605 (38%), Positives = 352/605 (58%), Gaps = 29/605 (4%)

Query: 709  KGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ 768
            K E+ V +   +  KLK HQ+ GI+FMW   +++       D   GCILAH MGLGK+ Q
Sbjct: 156  KNEDQVVVNQQMFEKLKYHQIEGIKFMWNACLET-------DSSAGCILAHCMGLGKSLQ 208

Query: 769  VIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP-SELKPLRVFMLEDVSRDRR 827
            V+A  +T + +    +   LIV PV  + NW  EF  W P +  + L V   E +S+D R
Sbjct: 209  VVALSHTVLMNPVCKVERVLIVCPVGTILNWVNEFQIWLPGNSFETLNV--CELISKDTR 266

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
               + +W   GG+ ++GY  + +L+  K   D    R + +    GPD+LVCDE H +KN
Sbjct: 267  EAKITRWLNYGGIIILGYEMYLSLTKEKR-SDELFQRALVNP---GPDLLVCDEGHKLKN 322

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
              + T +A+ Q+  +RRI L+G+PLQNNL E++ MV FV  G LG++ +F   + N  E 
Sbjct: 323  EISATFKAMDQISTRRRIILSGTPLQNNLHEFHTMVQFVHRGLLGTTTDFGINYANVFEK 382

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            GQ  ++T  +V+ M +R+ IL++ L+  VQR D +V+   L PK  +V++V++S LQ +L
Sbjct: 383  GQMVDATELEVRAMKRRALILHKTLENTVQRFDSDVLAPFLLPKVEYVVSVRMSQLQIKL 442

Query: 1008 YKRFLDLHGFTNDRVSNEKIRK----SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAE 1063
            Y  +L+   FT   V     RK      F+ YQ L++IW HP  L+L  +    + ++  
Sbjct: 443  YLHYLE--NFTKGGVIQPTERKVESAGLFSDYQQLSRIWTHPKALKLAVN--LCNTKNRP 498

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
            D  + EN +      +K  ++ D L+   +       WW+ L+ +     +++SGK++LL
Sbjct: 499  DPKTGENSEDEYQAMKKQSDLEDDLEESANPAS-SSLWWSKLIPDDEINNIEHSGKILLL 557

Query: 1124 LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK------LWKKGKDWYRLD 1177
            ++IL  C  +GDK LVFSQS+ +LDLIE +L+        G        W    D++RLD
Sbjct: 558  MEILRHCEVIGDKLLVFSQSLTSLDLIEEFLAAEHLKSSAGNASAVSGTWILDTDYFRLD 617

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T+S+ER K    FN+P N RV+  LIST+AG +GINL  ANRVII D SWNP++D Q+
Sbjct: 618  GSTKSAERLKFCTAFNDPKNVRVRLFLISTKAGGIGINLTGANRVIIFDSSWNPSFDEQS 677

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
            ++R +R GQTKP F YR +A GTMEEK+Y RQV K  L+ R+VD Q++ R  +  ++  L
Sbjct: 678  VFRVYRLGQTKPCFIYRFVAQGTMEEKVYYRQVEKLALSRRIVDGQEMDRHFASNDLKDL 737

Query: 1298 FEFGD 1302
            + F +
Sbjct: 738  YLFNE 742


>gi|170585466|ref|XP_001897504.1| SNF2 family N-terminal domain containing protein [Brugia malayi]
 gi|158595051|gb|EDP33626.1| SNF2 family N-terminal domain containing protein [Brugia malayi]
          Length = 1327

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 275/780 (35%), Positives = 420/780 (53%), Gaps = 96/780 (12%)

Query: 613  DSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSK 672
            D EN + D  L        K+  R+I+   +L ++T      EKER++RL++ Q +F+  
Sbjct: 360  DEENDEMDKKLS------NKRGTRKIMTKEQLQKDTIDAEFAEKERRKRLEAKQKEFNG- 412

Query: 673  SKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEE-AVRIPSSISAKLKAHQVVG 731
             +L +   L   LS+ + I      +   +++  ++      V +  S+   LK HQ  G
Sbjct: 413  IELADGPDLATALSSSSQI-TKHQRLKSVVLDPDKKSSPPCPVSVHPSLVTFLKPHQAKG 471

Query: 732  IRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALI 789
            I+F++++ I+S+ ++     G G ILAH MGLGKT QVIAFL+T M    L   ++  LI
Sbjct: 472  IQFLYDSSIESLERLDQD--GGGGILAHCMGLGKTLQVIAFLHTVMMHSKLRDYIKRILI 529

Query: 790  VTPVNVLHNWKQEFMKWRPSE-----LKPLRVFMLE-DVSRDRRAELLA--KW--RAKGG 839
            + P NV+ NW  EF KW  +E     L  + V ++E D  +D  +  LA   W    +  
Sbjct: 530  IVPKNVVLNWYNEFEKWLDNENIDRDLATINVIVMELDSLKDYTSRRLALQNWFENDEPS 589

Query: 840  VFLIGYTAFRNLSFG------------KHVKDRNMAR---EICHALQD-GPDILVCDEAH 883
            V +IGY  FR L+              K  K++ +A+   +    LQD GPD+++CDEAH
Sbjct: 590  VMIIGYDMFRILTQADEDKGKKRIDGMKKTKNKRLAKLQPDFRKFLQDPGPDLIICDEAH 649

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
             +KN  +   + + +++ +RR+ LTG+PLQNNLMEY+CMV+FV+ G LG+  EF NRF N
Sbjct: 650  KLKNDDSALAKTMLKIRTKRRLCLTGTPLQNNLMEYHCMVNFVKPGLLGTKAEFANRFVN 709

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
             I  G+  ++T+ +V+ M +R H+LYE LK  V R D  V+ + +PPK  +V+ V+L+P 
Sbjct: 710  IINRGRTKDATAVEVRRMKKRCHVLYEHLKNVVDRKDYRVLTEAIPPKQEYVVNVRLTPR 769

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-----QLTKDKGYPS 1058
            Q  LY  FLD  G     +S     +     Y  L++IW HP  L     +L K + +  
Sbjct: 770  QISLYHAFLDSIGPEGILLS-----RRLLPDYHVLSRIWTHPYQLVAHQIELEKKRLWED 824

Query: 1059 RED--------------AEDSSSDE--NMDYN---------VVIGEKPRNM--NDFLQGK 1091
              D              +E  S D+   +D N          V   K R +   D   GK
Sbjct: 825  DRDEMADFIDDDESETLSEVDSDDDIIPLDNNDQPETSSKPAVSARKSRRLAGQDAEDGK 884

Query: 1092 ----NDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
                  +G+F K     L+ E    +   S K++LL++I+     +GDK LVFSQSI ++
Sbjct: 885  EIMPEYEGWFAK---TGLVTEADRNDFSLSNKLMLLVEIIKKSEEIGDKLLVFSQSIESI 941

Query: 1148 DLIEFYLSKLPRPG-------------KQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 1194
             LI+  L  +   G              +   WK+G+D+  +DG+ ++S+R ++  +FN+
Sbjct: 942  SLIKRMLQYMDENGVWFTDGHEAMKAANETWGWKEGRDYMVIDGQVQTSKRHEIQTKFND 1001

Query: 1195 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYR 1254
            P N R +  LISTRAGSLG N+ +ANRV+I D  WNP++D Q+++R +R+GQTKPV+ YR
Sbjct: 1002 PNNLRSRLMLISTRAGSLGTNMVAANRVVIFDACWNPSHDTQSLFRVYRFGQTKPVYIYR 1061

Query: 1255 LMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSK 1314
             +A GTMEE+IYKRQVTKE  + RVVD  Q+ R  +  ++L L++F  DE  D   A  +
Sbjct: 1062 FIAQGTMEERIYKRQVTKESTSMRVVDEAQIERHFAGHDLLELYKFDPDELNDTQNAAKR 1121


>gi|391338344|ref|XP_003743519.1| PREDICTED: uncharacterized protein LOC100907712 [Metaseiulus
            occidentalis]
          Length = 1491

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 231/695 (33%), Positives = 376/695 (54%), Gaps = 51/695 (7%)

Query: 626  GGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDL 685
             G    +K I+ +L  ++L + T      EKER  R++ +Q +++  +K        GD 
Sbjct: 630  SGTHVGRKNIKELLTGSQLSKVTIEANKREKERTRRIEEMQRKYNDFAKK------GGD- 682

Query: 686  SAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRK 745
              G  ++         I+       E  V++   +S ++K+HQV G++F++ N++++I K
Sbjct: 683  -EGEDVQC--------ILEFDLATKEPLVQVHPQLSRRMKSHQVEGVKFLYTNLVETIAK 733

Query: 746  VKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALIVTPVNVLHNWKQEF 803
            ++    G G IL H MGLGKTFQV+ FL+T M   +L    +T L+++P+NV+  W++E 
Sbjct: 734  LREKSPGTGAILGHCMGLGKTFQVVCFLHTLMTHKDLRGYFKTVLVISPLNVIATWQEEI 793

Query: 804  MKW---RPSELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAF-----RNLSFG 854
             +W    P   + L+ F L + S  R RA +L+KW+  GG+ L+  +       R    G
Sbjct: 794  SRWVDRDPKITEKLKQFSLHNESNQRLRAAMLSKWQRSGGIMLMTPSLLVSLLGRETDAG 853

Query: 855  KHVKDRN--------MAREICHALQDGPDILVCDEAHMIKNTRADTTQAL-KQVKCQRRI 905
            K+ + +N          + + H    GP++L+ DE H +K +    TQ +   +K  R+I
Sbjct: 854  KNKRTKNKQPLDPELRKQFLAHLCLPGPNLLIVDEGHTLKRSSTQLTQIVDTMIKTTRKI 913

Query: 906  ALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRS 965
             LTG+PLQNNL EYY MV  V    LG+  E+RNRF+NPI NGQ+ NST+ D++ M QR+
Sbjct: 914  LLTGTPLQNNLTEYYTMVSIVSPHLLGTKAEYRNRFENPITNGQYKNSTASDIRKMRQRA 973

Query: 966  HILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNE 1025
             +L + L+  V R D++V++  LPP+  +VIT++LS +Q  LY++FL L    +    +E
Sbjct: 974  SVLKKLLENVVHRRDLSVLQSILPPRHDYVITIRLSKMQELLYEKFLGLLVSKSGEQGSE 1033

Query: 1026 KIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMN 1085
               +     +  L  +W HP +L + K      R++A   +  + + ++ +  E      
Sbjct: 1034 PSLRRLLQDFVLLRSVWTHPKLLTMPKKTLQRERKNA---TVADMLTFDAIAPEP----- 1085

Query: 1086 DFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIP 1145
                   +     KDW+   +      ++    K+ +L DI+  C  +GDK +VF   + 
Sbjct: 1086 -------NSEIINKDWFKPFVEGKNVDDITLGPKIFVLCDIIQNCHMIGDKLVVFCTQLS 1138

Query: 1146 TLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
             LDL+EF L  +         W K  D++R+DG T + +R +  + FN+P N R +  L+
Sbjct: 1139 ALDLVEFLLRIMNDNHIGEGRWSKDIDYFRMDGSTSAEDRHRFFKIFNDPKNTRARLFLV 1198

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            ST AG LG  L  ANR++++D SWNP  D QA+YR +R GQ+KPV+ YR ++ GTMEEKI
Sbjct: 1199 STNAGKLGSTLVGANRMVLLDTSWNPADDNQAVYRIYRIGQSKPVYIYRFVSFGTMEEKI 1258

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            Y R + KE  + RV+D   + R  + E++  L+ F
Sbjct: 1259 YARNILKESQSCRVLDDSNMERHFTHEDVRDLYTF 1293


>gi|440891353|gb|ELR45091.1| Helicase ARIP4 [Bos grunniens mutus]
          Length = 1430

 Score =  418 bits (1074), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 264/703 (37%), Positives = 381/703 (54%), Gaps = 94/703 (13%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 191  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 249

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 250  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 307

Query: 807  --RPSELKP--LRVFMLED----VSRDRRAELLAKWRAKGG-----------VFLIGYTA 847
              +P E++P   +V +L D    VS     E+  +    GG           +  I Y  
Sbjct: 308  DSKPEEVQPRFFKVHILNDEHKTVSPHVVNEIEPELSCSGGEGCAEMLPLLLLLCIYYDN 367

Query: 848  FRNLSF----------GKHVKDRN---------------MAREICHAL-QDGPDILVCDE 881
               LS            K  K R+                 RE   AL + GPD+++CDE
Sbjct: 368  NLQLSLKCSIIVMHVIPKKAKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDE 427

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
             H IKN +A T+QALK ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F
Sbjct: 428  GHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMF 487

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
            + PI NGQ  +ST +DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS
Sbjct: 488  ERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLS 547

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE- 1060
             +QR LY +F+D      D  ++  +  +    +    +IWNHP +L     K   + E 
Sbjct: 548  QIQRDLYTQFMDRF---RDCGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQ 604

Query: 1061 --DAEDSSSD---------------ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK---- 1099
              D E+  S                E+      +GE     + FLQG   + F ++    
Sbjct: 605  DLDVEELGSAGTSARCPSQGTKGKVEDSALASSMGEA--TNSKFLQGVGFNPFQERGNNI 662

Query: 1100 ---DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK 1156
               +W  DLL  +    L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K
Sbjct: 663  VTYEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGK 722

Query: 1157 --LP-RPGKQG---KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
              +P  PG +G   + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG
Sbjct: 723  REVPCLPGAEGQGVQKWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAG 782

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
             LG+NL  ANRV++ D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ+
Sbjct: 783  CLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQI 842

Query: 1271 TKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVS 1313
            +K+G++ RVVD        +++E+ +L  F + E P P T+++
Sbjct: 843  SKQGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQTSLN 884


>gi|449477833|ref|XP_004155137.1| PREDICTED: transcriptional regulator ATRX-like [Cucumis sativus]
          Length = 366

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/244 (81%), Positives = 215/244 (88%), Gaps = 5/244 (2%)

Query: 1120 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
            MVLLL+ILTMCS +GDK+LVFSQSIPTLDLIEFYLS+LPR GK+GK WKKGKDWYRLDGR
Sbjct: 1    MVLLLEILTMCSELGDKALVFSQSIPTLDLIEFYLSRLPRRGKRGKFWKKGKDWYRLDGR 60

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
            TESSERQK+VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY
Sbjct: 61   TESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 120

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFE 1299
            RAWRYGQTKPVFAYR +AHGTMEEKIYKRQVTKEGLAARVVDRQQV+RTIS+EEMLHLFE
Sbjct: 121  RAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEMLHLFE 180

Query: 1300 FGDDENPDPLTAVSKENGQGSSQ----NTNCALKHKLPLSHEGC-SDKLMESLLGKHHPR 1354
            FGD+EN +  T + + NG  S Q    +    LK K PLSH  C SDKLME+LLGKHHPR
Sbjct: 181  FGDEENLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGSCSSDKLMETLLGKHHPR 240

Query: 1355 CAVN 1358
               N
Sbjct: 241  WVAN 244


>gi|402594840|gb|EJW88766.1| SNF2 family domain-containing protein [Wuchereria bancrofti]
          Length = 1115

 Score =  415 bits (1066), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 283/819 (34%), Positives = 432/819 (52%), Gaps = 116/819 (14%)

Query: 592  LTSELGRAMGSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIR----------RILDD 641
            + SE+    GS  L  SS E+ SE S    N +    +  +K+IR           I +D
Sbjct: 120  MISEIIDTDGSIELPNSSDENSSETSRKGRNTR---SKLIRKRIRIDDDGDEDDDNISED 176

Query: 642  AELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGY 701
             E+ +  K     +KER++RL++ Q +F+   +L +   L   LS+ + I      +   
Sbjct: 177  EEIMKWAKN----QKERRKRLEAKQKEFNG-IELADGPDLATALSSSSQI-TKHQRLKSV 230

Query: 702  IVNVVREKGEE-AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHT 760
            +++  ++      V +  S+   LK HQ  GI+F++++ I+S+ ++     G G ILAH 
Sbjct: 231  VLDPDKKSSPPCPVSVHPSLVTFLKPHQAKGIQFLYDSSIESLERLDQD--GGGGILAHC 288

Query: 761  MGLGKTFQVIAFLYTAMRSVNLG--LRTALIVTPVNVLHNWKQEFMKWRPSE-------- 810
            MGLGKT QVIAFL+T M    L   ++  LI+ P NV+ NW  EF KW  +E        
Sbjct: 289  MGLGKTLQVIAFLHTVMMHSKLRDYIKRILIIVPKNVVLNWYNEFEKWLDNENIDRDLAT 348

Query: 811  LKPLRVFMLEDVSRDRRAELLAKW--RAKGGVFLIGYTAFRNLSFG------------KH 856
            +  + +  L+D +  R A  L  W    +  V +IGY  FR L+              K 
Sbjct: 349  INVMELDSLKDYTSRRLA--LQNWFENDEPSVMIIGYDMFRILTQADGDKGKKRIDGMKK 406

Query: 857  VKDRNMAR---EICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPL 912
             K++ +A+   +    LQD GPD+++CDEAH +KN  +   + + +++ +RR+ LTG+PL
Sbjct: 407  TKNKRLAKLQPDFRKFLQDPGPDLIICDEAHKLKNDDSALAKTMLKIRTKRRLCLTGTPL 466

Query: 913  QNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQL 972
            QNNLMEY+CMV+FV+ G LG+  EF NRF N I  G+  ++T  +V+ M +R H+LYE L
Sbjct: 467  QNNLMEYHCMVNFVKPGLLGTKAEFANRFANIINRGRTKDATPAEVRRMKKRCHVLYEHL 526

Query: 973  KGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFF 1032
            K  V R D  V+ + +PPK  +V+ V+L+P Q  LY+ FLD  G     +S     +   
Sbjct: 527  KNVVDRKDYRVLTEAIPPKQEYVVNVRLTPRQISLYRTFLDGIGPEGILLS-----RRLL 581

Query: 1033 AGYQALAQIWNHPGIL-----QLTKDKGY------------------PSREDAED----- 1064
              Y  L++IW HP  L     +L K + +                  PS  D++D     
Sbjct: 582  PDYHVLSRIWTHPYQLVAHQIELEKKRLWEDDKDEMADFIDDNESETPSEVDSDDDIIPL 641

Query: 1065 --SSSDENMDYNVVIGEKPRNM--NDFLQGK----NDDGFFQKDWWNDLLHEHTYKELDY 1116
              +   E      V   K R +   D   GK      +G+F K     L+ E    +   
Sbjct: 642  DNNDQPETSSKLAVPARKSRRLAGQDAEDGKEIMPEYEGWFTK---TGLVTEADRDDFSL 698

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG-------------KQ 1163
            S K++LL++I+     +GDK LVFSQSI ++ LI+  L  +   G              +
Sbjct: 699  SNKLMLLVEIIKKSEEIGDKLLVFSQSIESISLIKRMLQYMDENGVWFTDGHEAMKAANE 758

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
               WK+G+D+  +DG+ ++S+R ++  +FN+P N R +  LISTRAGSLG N+ +ANRV+
Sbjct: 759  TWGWKEGRDYMVIDGQVQTSKRHEIQTKFNDPNNLRSRLMLISTRAGSLGTNMVAANRVV 818

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            I D  WNP++D Q+++R +R+GQTKPV+ YR +A GTMEE+IYKRQVTKE  + RVVD  
Sbjct: 819  IFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDEA 878

Query: 1284 QVHRTISKEEMLHLFEFGDDENPD-------PLTAVSKE 1315
            Q+ R  +  ++L L++F  DE  D       PL A  K+
Sbjct: 879  QIERHFAGHDLLELYKFDPDELNDTQNVLKRPLMAPPKD 917


>gi|196005243|ref|XP_002112488.1| hypothetical protein TRIADDRAFT_25002 [Trichoplax adhaerens]
 gi|190584529|gb|EDV24598.1| hypothetical protein TRIADDRAFT_25002 [Trichoplax adhaerens]
          Length = 807

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 263/733 (35%), Positives = 396/733 (54%), Gaps = 89/733 (12%)

Query: 632  KKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASI 691
            +KKIRR+L+  EL  ET+     EK+R +R+K        +SK  +S T           
Sbjct: 47   RKKIRRVLNYFELDPETRAAAKEEKKRLDRIKD-----QKRSKTTSSAT----------- 90

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK 751
                  +  +I+   +   ++ V + S IS  LKAHQ  GI+FMW + I+S+ ++   + 
Sbjct: 91   ---NSQVDDFILE--KHDNKKIVYVQSFISKHLKAHQKEGIKFMWTSCIESVDRI--AEP 143

Query: 752  GLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE- 810
            G GCI+AH+MGLGKT QVIAF+   +   N  +++ L+V P NVL NW  EF KW   E 
Sbjct: 144  GSGCIIAHSMGLGKTLQVIAFIDAVLNYGNESIQSVLVVCPKNVLLNWALEFKKWLKREN 203

Query: 811  LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAF-RNLSFGKHVKDRNMAREICHA 869
               +  F     S   R   L  W A  G+ +I Y  + R LS  K   DR+    +   
Sbjct: 204  SYSVHTFSATLSSTKDRLRPLRLWNATKGLMIISYNMYTRLLSPDKSNFDRSCNDFLTQV 263

Query: 870  L-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
            L + GPDI++CDE H++K+ +  T++ L +++ +RRI LTG+PLQNNL EYY MV+FV+ 
Sbjct: 264  LLEPGPDIVICDEGHLLKSQKTKTSEILNRIRTKRRIILTGTPLQNNLSEYYYMVNFVKP 323

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
              LGS  EF+NRF NPI NG H +ST +DVK M +R+++L  ++K FVQR D +V++ +L
Sbjct: 324  RLLGSMSEFKNRFINPIRNGLHADSTRDDVKYMKKRTYVLNLKVKAFVQRYDYDVLESEL 383

Query: 989  PPKTVFVITVKLS------------------PLQRRLYKRFLDLHGFTN----------- 1019
            PPK  +VI +++S                   L  R Y  F D    T+           
Sbjct: 384  PPKHEYVIYIRMSRKQCELYKSYLEKFASDDHLHFRTYSLFGDFSNLTSIWTYPWNWKRD 443

Query: 1020 ------DRVS-NEKIRKSFFAGYQ------ALAQ----IWNHPGILQLTK-DKGYPSRED 1061
                  D VS N+++      G        +LA+    + N  GI+  T+ D G  ++ +
Sbjct: 444  NNNSMTDMVSENDEVSTVSDGGCSTTWKDSSLAEDCDHLQNDTGIIDATRLDLGDTTKGN 503

Query: 1062 AEDSS-----SDENMDYNVVIGEKPRNMN-DFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
              DS+     SD+     V + +   N   +    K+     +K W   L        + 
Sbjct: 504  ENDSANTRVNSDDGSKKAVTVDQLVLNTTINSASDKDAVDRHKKRWLEQLAKVPQEDLMT 563

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            Y  KM +++ I+ +   + +K ++FS S+  L LIE  L +   P    +      D+ R
Sbjct: 564  YCNKMKVVVKIIDLAYKLQEKVIIFSHSLCCLTLIEEVLRENCTPSLSYE------DYCR 617

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DGRT +  RQ+ +++FN   + R +  LISTRAGSLGINL +A+RV++ D  WNP+YD+
Sbjct: 618  MDGRTSAELRQRYIDKFNNSNSYRCRVFLISTRAGSLGINLTAASRVVLFDVGWNPSYDM 677

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QAI+RA+R+GQ K V+ YRL+A GTME+KIY+RQVTK+ LA RV+D++Q+ R  +  E+ 
Sbjct: 678  QAIFRAYRFGQKKTVYVYRLVAKGTMEQKIYERQVTKQSLAYRVIDKRQIERHYTMSELQ 737

Query: 1296 HLFEFGDDENPDP 1308
             L+ F     P+P
Sbjct: 738  ELYAF----TPEP 746


>gi|313242328|emb|CBY34484.1| unnamed protein product [Oikopleura dioica]
          Length = 763

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 259/763 (33%), Positives = 403/763 (52%), Gaps = 89/763 (11%)

Query: 541  GRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSELGRAM 600
            G   DL+ C  C   FC  C+KRN   A  +  ++A+ W+C CC P  L++L     + M
Sbjct: 32   GEGGDLLGCDECVESFCKKCIKRNFGRA-ETQMIEAAKWKCFCCDPKPLRKLLDTARKVM 90

Query: 601  GSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQE 660
             + N     + SD EN D + +     K+K+K K R+I+ D +L EETK     EKER+ 
Sbjct: 91   DARN--EDEAGSDKENIDEEEDGDGKKKKKEKAKSRKIMGDEKLSEETKAAEKAEKERKI 148

Query: 661  RLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSI 720
            RL+ ++ Q  S        T+D +                    ++ +K E  V++   +
Sbjct: 149  RLEKIREQRQSSKPGQTFETIDWN-------------------GILNKKPE--VKVDEGL 187

Query: 721  SAKLKAHQVVGIRFMWENIIQSIRK------VKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
               LK HQ+ GI+FMW+ +I+S+ +      + S  KG GCILAH MGLGKT Q I  ++
Sbjct: 188  KVHLKTHQIDGIQFMWDCVIESVTQKGNEFILGSNQKGHGCILAHCMGLGKTLQSIGIMH 247

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS-RDRRAELLAK 833
            T      L LR  L++ P+NV  NW  E  KW  S  +PL  + L+  +    R ++  +
Sbjct: 248  TLYTHEFLNLRHFLVLAPLNVCENWAIEVDKWTGSLQRPLGCWNLQSSTDYHERLDMCKE 307

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHV--KDRNMAREICHALQDGPDILVCDEAHMIKNTRAD 891
            W A+GGV ++GY+ FR LS G ++  K + +  +    L +   ++V DE H +KN+ + 
Sbjct: 308  WEAEGGVLVLGYSLFRMLSTGANMNRKVKRLLPKFKEFLLNKSSLIVADEGHQLKNSESA 367

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
             ++A KQ+K  RRI LTG+P+QNNL EY+CM+DFVR   LG++ EFRNRF NPI NG+H 
Sbjct: 368  ISKATKQIKTMRRIVLTGTPMQNNLDEYHCMLDFVRPNLLGTNKEFRNRFANPIRNGEHI 427

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
            ++T  DV +M +R+ IL + L G VQR D + + K LPPK  +V++++L+  Q +LY+ +
Sbjct: 428  DATDFDVNLMKKRAFILAKSLDGVVQRKDYSYMCKHLPPKHEYVLSLQLTETQIKLYEYY 487

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP-GILQLTK------------------ 1052
            L ++ F    VS     +  F  +Q    I NHP  +LQ T+                  
Sbjct: 488  LKVYNFYWP-VSG----RGLFGDFQTFLLINNHPRALLQQTEQREVREEHEESEDEDFNA 542

Query: 1053 ------DKGY---PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
                  DK     P  +D ++  +  ++     I  K   ++        D    + W+ 
Sbjct: 543  ENLDDDDKEVVETPDPKDEDELRALSSLKIRQYILSKAGGLHHMNHADPRDTM--RVWYE 600

Query: 1104 DLLHEHTYKELDY-----SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL---- 1154
             +++E      D+     S K+  L++I+ +C ++GDK +VFSQS+ +LD IE +L    
Sbjct: 601  QVMNESNENTFDWDRAEISIKINALIEIINICHHLGDKLIVFSQSVISLDTIEGFLHDST 660

Query: 1155 -----------SKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1203
                        K+P      K W K  D++R+DG   +S+R   +E FN+  + R +  
Sbjct: 661  VTKGYNSDDDEPKVPMFVGNQK-WYKNIDYFRIDGSVTASKRTAFIESFNDLEDPRARLF 719

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
            L+ST+AG +G NL  ANRVII D SWNP +D+Q+++R +R+GQ
Sbjct: 720  LVSTKAGGIGTNLVGANRVIIFDSSWNPAHDVQSLFRVYRFGQ 762


>gi|391337406|ref|XP_003743060.1| PREDICTED: transcriptional regulator ATRX-like [Metaseiulus
            occidentalis]
          Length = 879

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/644 (36%), Positives = 368/644 (57%), Gaps = 41/644 (6%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  V + +++   +K HQV G++F+++ +I+SI +V     G G ILAH MGLGKTFQVI
Sbjct: 52   EPLVEVEAALVRDMKPHQVEGVKFLYDTVIESIEQVSQNAPGSGAILAHCMGLGKTFQVI 111

Query: 771  AFLYTAMRSVNLG--LRTALIVTPVNVLHNWKQEFMKW--RPSELK-PLRVFMLEDVSR- 824
            +FL T M    L   +R  ++V P NV+ NW +EF  W     ++K  LRV+        
Sbjct: 112  SFLQTVMTHGILKRYIRKVIVVCPCNVVLNWVREFEMWIDENEDVKDALRVYECSGPKNI 171

Query: 825  DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAH 883
              R E+L  W   GGVF++GY+ FR +S  K+     +  ++   L D G D++VCDE H
Sbjct: 172  HERLEMLEDWSRNGGVFILGYSMFRLMS-RKNAAPWEIEAKLPLLLHDPGADLVVCDEGH 230

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
            ++KN +   ++A+  ++ +RR+ LTG+PLQNN+ EY+CM+ FV+   LG+  EF NRF  
Sbjct: 231  LLKNGKTQISKAMNLIRTKRRVILTGTPLQNNMSEYHCMLSFVKPNLLGTHKEFNNRFLI 290

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            PI  GQ  ++T   V+ M +R HIL + L G + R D N +   LP K  ++I+++LS +
Sbjct: 291  PITYGQELHATVYAVRRMRKRVHILNQLLAGCIHRRDYNHLTPYLPTKFEYIISIELSDM 350

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAE 1063
            Q+ LY+++LD  G   D       R+     YQ L  +W HP ++  ++ +    R+   
Sbjct: 351  QKNLYRQYLDYIGIGEDTPRERLKRRMLLMDYQVLKMVWTHPSLVTESEHRREQIRQRRT 410

Query: 1064 DSSSDENMDYNV------VIGE-------KPRNMNDFLQGKNDDGFFQKD---------W 1101
                  N+D ++      V G+       K   +++F     ++     D         W
Sbjct: 411  SKQKPLNLDDSIGAWDSLVFGQIGQEEILKFCGLDEFRFETQNEQAGPVDISAKGEPDKW 470

Query: 1102 WNDLLHEHTYKELD---YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL------IEF 1152
            W+D+L     +EL+    S K+ L  +IL     +GDK ++FS SI TLDL      IE+
Sbjct: 471  WSDVLPSGA-EELESLALSSKLSLAFEILRESELVGDKVILFSTSILTLDLVERNLRIEY 529

Query: 1153 YLSKLPRPGKQG-KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGS 1211
              +    P     + W  G D++RLDG+T+ + R++ +++FN+P N+R +  L+ST+AG 
Sbjct: 530  DRAVAENPESSAIRSWLPGVDYFRLDGKTDINVRKRDIDQFNDPRNRRARLFLVSTKAGG 589

Query: 1212 LGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVT 1271
             G N+  ANRVI++D SWNP+ D QA++R +R+GQTKPVF YRL+AH TMEEKIY RQV+
Sbjct: 590  NGTNMVGANRVIVLDASWNPSDDSQAVFRVYRFGQTKPVFVYRLVAHATMEEKIYDRQVS 649

Query: 1272 KEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKE 1315
            K  LA RVVD Q + R  ++ ++  L+EF  +++     ++ K+
Sbjct: 650  KISLACRVVDEQNLERHFNEADLRALYEFKPEKDARRTPSIPKD 693


>gi|324500516|gb|ADY40241.1| Transcriptional regulator ATRX [Ascaris suum]
          Length = 1617

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 270/779 (34%), Positives = 407/779 (52%), Gaps = 135/779 (17%)

Query: 629  RKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFS--------------SKSK 674
            ++++   + IL   +L +ET      EKER++R+++ Q +F+              + S+
Sbjct: 653  KRKRGGAKPILTKDKLAKETVDAEKAEKERRKRIEAKQREFNGIEFAEGSDLASTLNNSQ 712

Query: 675  LMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEA--VRIPSSISAKLKAHQVVGI 732
             + SV LD D                        K EE   V +  S+   LK HQ  GI
Sbjct: 713  RLKSVVLDPD-----------------------SKSEEPCPVAVHQSLVRYLKKHQAEGI 749

Query: 733  RFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALIV 790
            +F++   I+S+ ++   ++G G ILAH MGLGKT QVIAFL+T M    +G  ++  L+V
Sbjct: 750  QFLYNCTIESLDRLD--EEGGGAILAHCMGLGKTLQVIAFLHTIMMHSKIGEKVKHVLVV 807

Query: 791  TPVNVLHNWKQEFMKWRPSE-----LKPLRVFMLEDVSR-DRRAELLAKW--RAKGGVFL 842
             P NV+ NW +EF KW  ++     L  + V  L+ +     R   L  W    +  V +
Sbjct: 808  VPKNVVLNWHKEFEKWLDNDDIDRDLATINVMELDSLKEYSDRHMALQNWYENEEPSVMI 867

Query: 843  IGYTAFRNLS-----------------FGKHVKDRNMAR---EICHALQD-GPDILVCDE 881
            IGY  FR L+                   K    R +AR   +    LQD GPD++VCDE
Sbjct: 868  IGYDMFRILTRDDDDNVKNKKMEVKKKLSKQA--RKLARLQPDFRKFLQDPGPDMIVCDE 925

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
            AH +KN  +  T+ + +++ +RRI LTG+PLQN+LMEY+CMV+FV++G +G+  EF NRF
Sbjct: 926  AHKLKNDESALTKTMMKIRTRRRICLTGTPLQNSLMEYHCMVNFVKQGLMGTKGEFANRF 985

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
             N I  G+  ++T  +V+ M +R H+L E LKG VQR+D  V+ + +PPK  +VI V+L+
Sbjct: 986  ANIINRGRVKDATPAEVRFMKRRCHVLCEHLKGVVQRVDYRVLLEAIPPKQEYVINVRLT 1045

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-----QLTKDKGY 1056
            P Q  LY+ FL+  G  NDR     + K     Y  L++IW HP  L      + K + +
Sbjct: 1046 PRQVSLYRAFLERVG--NDRSG---LSKRLLPDYHILSRIWTHPHQLIAHEVVMEKKRLF 1100

Query: 1057 PSR--------EDAEDSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD------- 1100
                       +D +++ S  E  D +VV  +     ++    KN+ G   K        
Sbjct: 1101 EEEKEEIEDFIDDGDETPSVVETSDDDVVALDDEEGCSNAGAVKNNGGLSTKTCRKSKRL 1160

Query: 1101 --------------------WWND--LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSL 1138
                                W+ +  L+ E    +   S K++LL+ I+  C  +GDK L
Sbjct: 1161 AGEEAEEIVDGPRTPPEFRGWYAETGLVTEADENDFSLSNKLMLLVQIVKKCEEIGDKIL 1220

Query: 1139 VFSQSIPTLDLIEFYLSKLP-------------RPGKQGKLWKKGKDWYRLDGRTESSER 1185
            VFSQSI +L LI+  L  +              +   +   W +G+D+  +DG+ +S +R
Sbjct: 1221 VFSQSIESLTLIKRMLHYMDSHDLWFSDGHEAIKSANETWGWIEGRDYMVIDGQVQSGKR 1280

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
            Q++  +FN P N R +  LISTRAGSLG N+ +ANRVII D  WNP++D Q+++R +R+G
Sbjct: 1281 QEVQTKFNNPNNLRARLMLISTRAGSLGTNMVAANRVIIFDACWNPSHDTQSLFRVYRFG 1340

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            QTKPV+ YR +A GTMEE+IYKRQVTKE  A RV+D  Q+ R     +++ L+ F  DE
Sbjct: 1341 QTKPVYIYRFIAQGTMEERIYKRQVTKESTALRVIDEAQIQRHFDGHDLMELYSFEPDE 1399


>gi|324500492|gb|ADY40232.1| Transcriptional regulator ATRX [Ascaris suum]
          Length = 1681

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 270/779 (34%), Positives = 407/779 (52%), Gaps = 135/779 (17%)

Query: 629  RKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFS--------------SKSK 674
            ++++   + IL   +L +ET      EKER++R+++ Q +F+              + S+
Sbjct: 717  KRKRGGAKPILTKDKLAKETVDAEKAEKERRKRIEAKQREFNGIEFAEGSDLASTLNNSQ 776

Query: 675  LMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEA--VRIPSSISAKLKAHQVVGI 732
             + SV LD D                        K EE   V +  S+   LK HQ  GI
Sbjct: 777  RLKSVVLDPD-----------------------SKSEEPCPVAVHQSLVRYLKKHQAEGI 813

Query: 733  RFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALIV 790
            +F++   I+S+ ++   ++G G ILAH MGLGKT QVIAFL+T M    +G  ++  L+V
Sbjct: 814  QFLYNCTIESLDRLD--EEGGGAILAHCMGLGKTLQVIAFLHTIMMHSKIGEKVKHVLVV 871

Query: 791  TPVNVLHNWKQEFMKWRPSE-----LKPLRVFMLEDVSR-DRRAELLAKW--RAKGGVFL 842
             P NV+ NW +EF KW  ++     L  + V  L+ +     R   L  W    +  V +
Sbjct: 872  VPKNVVLNWHKEFEKWLDNDDIDRDLATINVMELDSLKEYSDRHMALQNWYENEEPSVMI 931

Query: 843  IGYTAFRNLS-----------------FGKHVKDRNMAR---EICHALQD-GPDILVCDE 881
            IGY  FR L+                   K    R +AR   +    LQD GPD++VCDE
Sbjct: 932  IGYDMFRILTRDDDDNVKNKKMEVKKKLSKQA--RKLARLQPDFRKFLQDPGPDMIVCDE 989

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
            AH +KN  +  T+ + +++ +RRI LTG+PLQN+LMEY+CMV+FV++G +G+  EF NRF
Sbjct: 990  AHKLKNDESALTKTMMKIRTRRRICLTGTPLQNSLMEYHCMVNFVKQGLMGTKGEFANRF 1049

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
             N I  G+  ++T  +V+ M +R H+L E LKG VQR+D  V+ + +PPK  +VI V+L+
Sbjct: 1050 ANIINRGRVKDATPAEVRFMKRRCHVLCEHLKGVVQRVDYRVLLEAIPPKQEYVINVRLT 1109

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-----QLTKDKGY 1056
            P Q  LY+ FL+  G  NDR     + K     Y  L++IW HP  L      + K + +
Sbjct: 1110 PRQVSLYRAFLERVG--NDRSG---LSKRLLPDYHILSRIWTHPHQLIAHEVVMEKKRLF 1164

Query: 1057 PSR--------EDAEDSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD------- 1100
                       +D +++ S  E  D +VV  +     ++    KN+ G   K        
Sbjct: 1165 EEEKEEIEDFIDDGDETPSVVETSDDDVVALDDEEGCSNAGAVKNNGGLSTKTCRKSKRL 1224

Query: 1101 --------------------WWND--LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSL 1138
                                W+ +  L+ E    +   S K++LL+ I+  C  +GDK L
Sbjct: 1225 AGEEAEEIVDGPRTPPEFRGWYAETGLVTEADENDFSLSNKLMLLVQIVKKCEEIGDKIL 1284

Query: 1139 VFSQSIPTLDLIEFYLSKLP-------------RPGKQGKLWKKGKDWYRLDGRTESSER 1185
            VFSQSI +L LI+  L  +              +   +   W +G+D+  +DG+ +S +R
Sbjct: 1285 VFSQSIESLTLIKRMLHYMDSHDLWFSDGHEAIKSANETWGWIEGRDYMVIDGQVQSGKR 1344

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
            Q++  +FN P N R +  LISTRAGSLG N+ +ANRVII D  WNP++D Q+++R +R+G
Sbjct: 1345 QEVQTKFNNPNNLRARLMLISTRAGSLGTNMVAANRVIIFDACWNPSHDTQSLFRVYRFG 1404

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            QTKPV+ YR +A GTMEE+IYKRQVTKE  A RV+D  Q+ R     +++ L+ F  DE
Sbjct: 1405 QTKPVYIYRFIAQGTMEERIYKRQVTKESTALRVIDEAQIQRHFDGHDLMELYSFEPDE 1463


>gi|297671222|ref|XP_002813740.1| PREDICTED: helicase ARIP4 isoform 2 [Pongo abelii]
          Length = 1161

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 251/664 (37%), Positives = 357/664 (53%), Gaps = 108/664 (16%)

Query: 761  MGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW-----------RPS 809
            MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W           +P 
Sbjct: 1    MGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPADNKPE 58

Query: 810  ELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-------- 857
            E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K          
Sbjct: 59   EVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGRPKKT 118

Query: 858  ---------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKC 901
                           + +   RE   AL + GPD+++CDE H IKN +A T+QALK ++ 
Sbjct: 119  KKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALKNIRS 178

Query: 902  QRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 961
            +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +DV++M
Sbjct: 179  RRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLM 238

Query: 962  NQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDR 1021
              RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D      D 
Sbjct: 239  RYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF---RDC 295

Query: 1022 VSNEKIRKSFFAGYQALAQIWNHPGIL-------------------------------QL 1050
             S+  +  +    +    +IWNHP +L                               Q 
Sbjct: 296  GSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSARCPPQG 355

Query: 1051 TKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWN 1103
            TK KG       EDS+   +M      GE     + FLQG   + F ++       +W  
Sbjct: 356  TKGKG-------EDSTLASSM------GEA--TNSKFLQGVGFNPFQERGNNIVTYEWAK 400

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP- 1160
            DLL  +    L+ S KMVLL  ++    N+GDK LVFSQS+ TL LIE +L K  +P P 
Sbjct: 401  DLLTNYQTGVLENSPKMVLLFHLIEESVNLGDKILVFSQSLSTLALIEEFLGKREVPCPP 460

Query: 1161 ---GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
               G+  + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL 
Sbjct: 461  GAEGQGAQKWVRNITYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLI 520

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRV++ D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ 
Sbjct: 521  GANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSD 580

Query: 1278 RVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLP 1333
            RVVD        +++E+ +L  F + E P P  +++ +  + S     C     L  K P
Sbjct: 581  RVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEP 639

Query: 1334 LSHE 1337
              HE
Sbjct: 640  FEHE 643


>gi|393907609|gb|EJD74712.1| SNF2 family domain-containing protein [Loa loa]
          Length = 1359

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 266/784 (33%), Positives = 416/784 (53%), Gaps = 114/784 (14%)

Query: 616  NSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKL 675
            NS  D   ++  K   K+  R+I+    L ++T      EKER++RL++ Q +F+   +L
Sbjct: 410  NSSEDEENEMSKKLPNKRGTRKIMTKERLQKDTIDAEFAEKERRKRLEAKQKEFNG-IEL 468

Query: 676  MNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEA-----VRIPSSISAKLKAHQVV 730
             +   L   LS+ + I     A    + +VV +  ++      V +  S+ A LK HQ  
Sbjct: 469  ADGPDLATALSSSSQI-----AKHQRLKSVVLDPDKKGSPPCPVSVHPSLVAFLKPHQAK 523

Query: 731  GIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL--GLRTAL 788
            GI+F++++ I+S+ +++    G G ILAH MGLGKT QVIAFL+T M    L   L+  L
Sbjct: 524  GIQFLYDSSIESLERLEQD--GGGGILAHCMGLGKTLQVIAFLHTVMMHPKLCVHLKRIL 581

Query: 789  IVTPVNVLHNWKQEFMKWRPSE--------LKPLRVFMLEDVSRDRRAELLAKW--RAKG 838
            I+ P NV+ NW  EF KW  +E        +  + +  L+D +  R A  L  W    + 
Sbjct: 582  IIVPKNVVLNWYNEFEKWLDNEDVDRDLATINIMELDSLKDYTNRRLA--LQNWFENDEP 639

Query: 839  GVFLIGYTAFRNLSFG-------------KHVKDRNMAREICHALQDGPDILVCDEAHMI 885
             V +IGY  FR L+ G             K  K++ +A+     +Q      + D A   
Sbjct: 640  SVMIIGYDMFRILTQGDDDKGKKRIDGMKKTTKNKKLAK-----MQPDFRKFLQDPA--- 691

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
                    + + +++ +RR+ LTG+PLQNNLMEY+CMV+FV+ G LG+  EF NRF N I
Sbjct: 692  ------LAKTMLKIRTKRRLCLTGTPLQNNLMEYHCMVNFVKPGLLGTKTEFANRFVNII 745

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
              G+  ++T  +V+ M +R H+LYE LK  V R D  V+ + +PPK  +V+ V+L+P Q 
Sbjct: 746  NRGRTKDATPAEVRHMKKRCHVLYEHLKNVVDRKDYRVLTEAIPPKQEYVVNVRLTPRQI 805

Query: 1006 RLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-----QLTKDKGYPS-- 1058
             LY+ FLD  G     +S     +     Y  L++IW HP  L     +L K + +    
Sbjct: 806  SLYRTFLDGIGPEGILLS-----RRLLPDYHVLSRIWTHPYQLIAHQIELEKKRLWEDDR 860

Query: 1059 -------REDAEDSSSDENMDYNVVI---GEKPRNMN---------------DFLQGKND 1093
                    +D  ++SS+ + D +V+     ++P   N               D  +GK  
Sbjct: 861  DEMADFINDDGSETSSEVDSDDDVIPLDNNDQPETSNRPVVPARKSRRLAGEDAEEGKEI 920

Query: 1094 DGFFQKDWWND--LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIE 1151
               ++ +W+    L+ E    +   S K++LL++I+     +GDK LVFSQSI ++ LI+
Sbjct: 921  MPEYE-EWFTKTGLVTEADRNDFSLSNKLMLLVEIIKKSEEIGDKLLVFSQSIESISLIK 979

Query: 1152 FYLSKLP-------------RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNK 1198
              L  +              +  K+   W++G+D+  +DG+ ++S+R ++  +FN+P N 
Sbjct: 980  RMLQYMDENDAWFTDGHEAMKAAKESWGWREGRDYMVIDGQVQTSKRHEIQTKFNDPNNL 1039

Query: 1199 RVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAH 1258
            R +  LISTRAGSLG N+ +ANRV+I D  WNP++D Q+++R +R+GQTKPV+ YR +A 
Sbjct: 1040 RARLMLISTRAGSLGTNMVAANRVVIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQ 1099

Query: 1259 GTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPD-------PLTA 1311
            GTMEE+IYKRQVTKE  + RVVD  Q+ R  +  ++L L++F  DE  D       PL A
Sbjct: 1100 GTMEERIYKRQVTKESTSMRVVDEAQIERHFAGHDLLELYKFDPDELDDTQNVPKRPLMA 1159

Query: 1312 VSKE 1315
              K+
Sbjct: 1160 PPKD 1163


>gi|194389260|dbj|BAG65618.1| unnamed protein product [Homo sapiens]
          Length = 1161

 Score =  398 bits (1023), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 249/664 (37%), Positives = 355/664 (53%), Gaps = 108/664 (16%)

Query: 761  MGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW-----------RPS 809
            MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W           +P 
Sbjct: 1    MGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPADNKPE 58

Query: 810  ELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-------- 857
            E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K          
Sbjct: 59   EVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGRPKKT 118

Query: 858  ---------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKC 901
                           + +   RE   AL + GPD+++CDE H IKN +A T+QAL  ++ 
Sbjct: 119  KKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALMNIRS 178

Query: 902  QRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 961
            +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +DV++M
Sbjct: 179  RRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLM 238

Query: 962  NQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDR 1021
              RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D      D 
Sbjct: 239  RYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF---RDC 295

Query: 1022 VSNEKIRKSFFAGYQALAQIWNHPGIL-------------------------------QL 1050
             S+  +  +    +    +IWNHP +L                               Q 
Sbjct: 296  GSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSARCPPQG 355

Query: 1051 TKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWN 1103
            TK KG       EDS+   +M      GE     + FLQG   + F ++       +W  
Sbjct: 356  TKGKG-------EDSTLASSM------GEA--TNSKFLQGVGFNPFQERGNNIVTYEWAK 400

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP- 1160
            DLL  +    L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P 
Sbjct: 401  DLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPP 460

Query: 1161 ---GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
               G+  + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL 
Sbjct: 461  GTEGQGAQKWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLI 520

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRV++ D SWNP +D QA+ R +RYGQ KP + YRL+A  T+E+KIY RQ++K+G++ 
Sbjct: 521  GANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSD 580

Query: 1278 RVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLP 1333
            RVVD        +++E+ +L  F + E P P  +++ +  + S     C     L  K P
Sbjct: 581  RVVDDLNPMLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESDLQLACLKYPHLITKEP 639

Query: 1334 LSHE 1337
              HE
Sbjct: 640  FEHE 643


>gi|395832711|ref|XP_003789400.1| PREDICTED: helicase ARIP4 isoform 2 [Otolemur garnettii]
          Length = 1161

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 248/651 (38%), Positives = 355/651 (54%), Gaps = 82/651 (12%)

Query: 761  MGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW-----------RPS 809
            MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W           +P 
Sbjct: 1    MGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPADNKPE 58

Query: 810  ELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-------- 857
            E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K          
Sbjct: 59   EVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFTTGRPKKT 118

Query: 858  ---------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKC 901
                           + +   RE   AL + GPD+++CDE H IKN +A T+QALK ++ 
Sbjct: 119  KKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALKNIRS 178

Query: 902  QRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 961
            +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +DV++M
Sbjct: 179  RRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLM 238

Query: 962  NQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDR 1021
              RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D      D 
Sbjct: 239  RYRSHVLHSLLEGFVQRRGHTVLKFHLPAKEENVILVRLSKIQRDLYTQFMDRF---RDC 295

Query: 1022 VSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS----------- 1067
             S+  +  +    +    +IWNHP +L     K   + E   D E+  S           
Sbjct: 296  GSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSARCPPQG 355

Query: 1068 ----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTYKELDY 1116
                 E+      +GE     + FLQG   + F ++       +W  DLL  +    L+ 
Sbjct: 356  TKGKGEDNTVASPVGEA--TNSKFLQGVGFNPFQERGNNIITYEWAKDLLTNYQTGVLEN 413

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---KLWKKG 1170
            S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   + W + 
Sbjct: 414  SPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLEKREVPCLPGAEGQGAQKWVRN 473

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
              ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ D SWN
Sbjct: 474  VSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWN 533

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTIS 1290
            P +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD        +
Sbjct: 534  PCHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPMLNFT 593

Query: 1291 KEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
            ++E+ +L  F + E P P  +++ +  + S     C     L  K P  HE
Sbjct: 594  RKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEPFEHE 643


>gi|426249475|ref|XP_004018475.1| PREDICTED: helicase ARIP4 isoform 2 [Ovis aries]
          Length = 1160

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 242/623 (38%), Positives = 346/623 (55%), Gaps = 78/623 (12%)

Query: 761  MGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW-----------RPS 809
            MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W           +P 
Sbjct: 1    MGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPADSKPE 58

Query: 810  ELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-------- 857
            E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K          
Sbjct: 59   EVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGRPKKA 118

Query: 858  ---------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKC 901
                           + +   RE   AL + GPD+++CDE H IKN +A T+QALK ++ 
Sbjct: 119  KKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALKNIRS 178

Query: 902  QRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 961
            +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +DV++M
Sbjct: 179  RRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLM 238

Query: 962  NQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDR 1021
              RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY  F+D      D 
Sbjct: 239  RYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTHFMDRF---RDC 295

Query: 1022 VSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSSD---------- 1068
             S+  +  +    +    +IWNHP +L     K   + E   D E+  S           
Sbjct: 296  GSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSARCPSQG 355

Query: 1069 -----ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTYKELDY 1116
                 E+      +GE     + FLQG   + F ++       +W  DLL  +    L+ 
Sbjct: 356  TRGKVEDSALASSVGEA--TNSKFLQGVGFNPFQERGNSIVTYEWAKDLLTNYQTGVLEN 413

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPGKQG---KLWKKG 1170
            S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P  PG +G   + W + 
Sbjct: 414  SPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGAEGQGVQKWVRN 473

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
              ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  ANRV++ D SWN
Sbjct: 474  VSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWN 533

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTIS 1290
            P +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ RVVD        +
Sbjct: 534  PCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLNPMLNFT 593

Query: 1291 KEEMLHLFEFGDDENPDPLTAVS 1313
            ++E+ +L  F + E P P T+++
Sbjct: 594  RKEVENLLHFVEKE-PAPQTSLN 615


>gi|345786990|ref|XP_003432877.1| PREDICTED: helicase ARIP4 isoform 1 [Canis lupus familiaris]
          Length = 1161

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 244/631 (38%), Positives = 342/631 (54%), Gaps = 104/631 (16%)

Query: 761  MGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW-----------RPS 809
            MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W           +P 
Sbjct: 1    MGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPADNKPE 58

Query: 810  ELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-------- 857
            E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K          
Sbjct: 59   EVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGRSKKT 118

Query: 858  ---------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKC 901
                           + +   RE   AL + GPD+++CDE H IKN +A T+QALK ++ 
Sbjct: 119  KKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALKNIRS 178

Query: 902  QRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 961
            +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +DV++M
Sbjct: 179  RRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLM 238

Query: 962  NQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDR 1021
              RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D      D 
Sbjct: 239  RYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF---RDC 295

Query: 1022 VSNEKIRKSFFAGYQALAQIWNHPGIL-------------------------------QL 1050
             S+  +  +    +    +IWNHP +L                               Q 
Sbjct: 296  GSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSARCPSQG 355

Query: 1051 TKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWN 1103
            TK KG       EDS+   +M      GE     + FLQG   + F ++       +W  
Sbjct: 356  TKGKG-------EDSTLASSM------GEA--TNSKFLQGVGFNPFQERGNNIVTYEWAK 400

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK-----LP 1158
            DLL  +    L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K     LP
Sbjct: 401  DLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLP 460

Query: 1159 RPGKQG-KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
                QG + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL 
Sbjct: 461  GADGQGVQKWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLI 520

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRV++ D SWNP +D QA+ R +RYGQ KP   YRL+A  T+E+KIY RQ++K+G++ 
Sbjct: 521  GANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSD 580

Query: 1278 RVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            RVVD        +++E+ +L  F + E P P
Sbjct: 581  RVVDDLNPMLNFTRKEVENLLHFVEKE-PAP 610


>gi|38014266|gb|AAH01474.2| RAD54L2 protein [Homo sapiens]
          Length = 1159

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 249/662 (37%), Positives = 354/662 (53%), Gaps = 108/662 (16%)

Query: 763  LGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW-----------RPSEL 811
            LGKT QVI+F+    R  +   +T L + PVN L NW  EF  W           +P E+
Sbjct: 1    LGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPADNKPEEV 58

Query: 812  KP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV---------- 857
            +P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K            
Sbjct: 59   QPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGRPKKTKK 118

Query: 858  -------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQR 903
                         + +   RE   AL + GPD+++CDE H IKN +A T+QALK ++ +R
Sbjct: 119  RSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALKNIRSRR 178

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            R+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +DV++M  
Sbjct: 179  RVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLMRY 238

Query: 964  RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS 1023
            RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D      D  S
Sbjct: 239  RSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF---RDCGS 295

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGIL-------------------------------QLTK 1052
            +  +  +    +    +IWNHP +L                               Q TK
Sbjct: 296  SGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSARCPPQGTK 355

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDL 1105
             KG       EDS+   +M      GE     + FLQG   + F ++       +W  DL
Sbjct: 356  GKG-------EDSTLASSM------GEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDL 400

Query: 1106 LHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP--- 1160
            L  +    L+ S KMVLL  ++     +GDK LVFSQS+ TL LIE +L K  +P P   
Sbjct: 401  LTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGT 460

Query: 1161 -GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
             G+  + W +   ++RLDG T + ER++L+ +FN+P N      L+STRAG LG+NL  A
Sbjct: 461  EGQGAQKWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGA 520

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NRV++ D SWNP +D QA+ R +RYGQ KP F YRL+A  T+E+KIY RQ++K+G++ RV
Sbjct: 521  NRVVVFDASWNPCHDAQAVCRVYRYGQKKPCFIYRLVADYTLEKKIYDRQISKQGMSDRV 580

Query: 1280 VDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLS 1335
            VD        +++E+ +L  F + E P P  +++ +  + S     C     L  K P  
Sbjct: 581  VDDLNPMLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEPFE 639

Query: 1336 HE 1337
            HE
Sbjct: 640  HE 641


>gi|291241069|ref|XP_002740438.1| PREDICTED: transcriptional regulator ATRX-like [Saccoglossus
            kowalevskii]
          Length = 1981

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/541 (39%), Positives = 311/541 (57%), Gaps = 65/541 (12%)

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHM 884
            RRA+ L  W   GG+ ++GY  +R LS G  ++++ + +     L D GPDI+VCDE H+
Sbjct: 1256 RRADNLQAWHDDGGILIMGYDMYRALSKGSRIRNKKLKKIFHDTLVDPGPDIVVCDEGHI 1315

Query: 885  IKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNP 944
            +KN  +  ++A+  ++  RRI LTG+PLQNNL+EY+CMV FV+   LG+  EF NRF NP
Sbjct: 1316 LKNDASSISEAMHNIRTLRRICLTGTPLQNNLVEYHCMVSFVKPNLLGTRKEFCNRFANP 1375

Query: 945  IENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQ 1004
            I NGQH +ST  DVKIM +R+H+L++ L G VQR D + + K LPPK  +V++++L   Q
Sbjct: 1376 IINGQHLDSTPRDVKIMKKRAHVLHDLLSGCVQRKDYSALTKFLPPKHEYVVSIRLCEKQ 1435

Query: 1005 RRLYKRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQ-------------- 1049
             +LYK +L+        V   K   S  FA YQ L ++W HP IL+              
Sbjct: 1436 IQLYKHYLETKASNPSEVGGYKGSGSGLFADYQVLLRVWTHPHILRLGTIRDQNRRRYDD 1495

Query: 1050 -------------------------------LTKDKGYPSREDAEDSSSDENMDYNVVIG 1078
                                           +T+DK    R+    + SD +++  VV  
Sbjct: 1496 SDSMDDFINDTDDDEDSASTKSSSDSDDVIDITEDKLPAKRKRRRVNDSDSSLE--VVNT 1553

Query: 1079 EKPRNMNDFLQGKNDDGFFQKD------WWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 1132
             K        +G++ D   Q        W+++++       ++  GK+VLL+D+L +  +
Sbjct: 1554 WKSSTRGGEGKGRDADSRSQTPILIDTRWYSEIVTPEDAYNIELGGKLVLLMDVLQLSED 1613

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL------WKKGKDWYRLDGRTESSERQ 1186
            +GDK LVFSQS+ +LD+IE +L  +    ++         W KG D++R+DG T +  R+
Sbjct: 1614 IGDKVLVFSQSLLSLDIIEDFLEYIETKAEEANTGDGEGAWVKGIDYFRMDGSTSAQNRK 1673

Query: 1187 KLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
               + FN+P N R +  LIST+AGSLGINL SANRVII D SWNPT+D+Q+I+R +R+GQ
Sbjct: 1674 AFQDLFNDPENLRARLFLISTKAGSLGINLVSANRVIIFDASWNPTHDVQSIFRVYRFGQ 1733

Query: 1247 TKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENP 1306
            TK  F YR +A GTMEEKIY+RQVTK+ L+ RVVD+ Q+ R  +  ++  L+ F    NP
Sbjct: 1734 TKACFIYRFLAQGTMEEKIYERQVTKQSLSRRVVDQFQIERHFTSSDLAELYNF----NP 1789

Query: 1307 D 1307
            D
Sbjct: 1790 D 1790



 Score =  101 bits (252), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 25/186 (13%)

Query: 628 KRKQKKKIRRILDDAELGEETKRKIAIEKERQERL-----KSLQVQFSSKSKLMNSVTLD 682
           K K ++KIR++L   +L +ETK     E ER++R+     + +QV   S  K   +++L 
Sbjct: 714 KGKGRRKIRKVLTKDKLQDETKNAAKEEAERRKRVAERRKQVIQVLDESPQKCPVTMSL- 772

Query: 683 GDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQS 742
                              ++    +  E  V++   +  KLK HQV  ++FMW+  I++
Sbjct: 773 -------------------VLESKPDSDEPLVQVNKDLIKKLKPHQVEAVQFMWDCCIET 813

Query: 743 IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQE 802
             K+K+G +G GCILAH MGLGKT  V  F++T + +    + T L+V P+N + NW +E
Sbjct: 814 YDKLKNGHEGGGCILAHCMGLGKTLSVFTFIHTILSTRRCKMNTCLVVAPLNTVLNWVKE 873

Query: 803 FMKWRP 808
              W P
Sbjct: 874 CEMWLP 879



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 11/111 (9%)

Query: 492 YCTACNNVAIEVHP--------HPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRS 543
           +CT+C     +V+P        HP LNV++C+ C          KD D ++  C WCG  
Sbjct: 44  HCTSCGE---QVNPSSKAFIKRHPTLNVLLCRRCHNYYTSDNITKDEDGTDEQCQWCGEG 100

Query: 544 SDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTS 594
             LV C  C   FC  C+KRN+    LS    A  W C  C    L  LT+
Sbjct: 101 GKLVCCDFCTATFCRACIKRNLGRKELSAIDDAKNWTCYVCDSKPLLHLTT 151


>gi|270010822|gb|EFA07270.1| hypothetical protein TcasGA2_TC013301 [Tribolium castaneum]
          Length = 1294

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 243/695 (34%), Positives = 369/695 (53%), Gaps = 71/695 (10%)

Query: 627  GKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLS 686
            G  K ++ IR IL D EL E T++    E ER  RL       +  SK            
Sbjct: 576  GGTKGRRNIRAILSDDELNELTQQAKNEENERIMRL-------AEHSK------------ 616

Query: 687  AGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKV 746
               +IE +      +I++   + GE  V +   ++  LK HQ  GI+FMWE   +S+  +
Sbjct: 617  ---NIESIQSQHEDFILDFDVKTGEPLVTVDHKLAKMLKPHQKSGIQFMWEACYESVEIL 673

Query: 747  KSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW 806
            K+   G GCILAH MGLGKT QVI  ++T         +  L+V P++ + NWK EF K 
Sbjct: 674  KTK-PGSGCILAHCMGLGKTLQVITLIHTLFTHPVTKTKHVLVVCPLSTVINWKNEFKKA 732

Query: 807  -----RPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 861
                  P ++ P  +    D+S   +  ++  WR  GGV ++GY A++ ++  K    R 
Sbjct: 733  FKQLDNPPDIYPYWIIK-GDISE--KINIIHTWRQTGGVLILGYDAYQIITNEKTAL-RI 788

Query: 862  MAREICHALQ----DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLM 917
             A E   AL+     GPD++VCDE H +KN +   TQAL +VK +RRI LTG+PLQNNL 
Sbjct: 789  TAVEKQRALEALVDPGPDLIVCDEGHQLKNGKTLKTQALMKVKTKRRIVLTGTPLQNNLK 848

Query: 918  EYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQ 977
            EYY MV FV+   LG+  E+ NRF +PI NGQ  +ST  D+K+M +R+H+L + LK  + 
Sbjct: 849  EYYFMVQFVKPHLLGTYLEYTNRFASPIMNGQFHDSTPGDIKLMKKRTHVLTKMLKNTIH 908

Query: 978  RMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA 1037
            R++ +V+   LP  T + I +KL+PLQ  LY R++DL      + SN  +  +FF   + 
Sbjct: 909  RVEGSVLSTYLPEITDYTIFIKLTPLQIDLYTRYIDL---VTGQASN--LSSTFFHDVRM 963

Query: 1038 LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
                  HP  L L   K    R+ A+ +   EN++ +                 N+    
Sbjct: 964  TNFCNLHPYALHLHYSKPTLKRK-AKTAGLIENLEGD----------------DNNVEHI 1006

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
            + DW+ +LL       ++YS K+ L+LDI++ C    +K L+F Q +  LD++E +L   
Sbjct: 1007 RADWYKNLLPADVSTNINYSTKIKLILDIISECMRNNEKVLIFGQYLVELDIVEHFL--- 1063

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
                KQ + W+   D+YR+DG T    R  L ++FN   N   K  L++ + G LG+NL 
Sbjct: 1064 ----KQFRNWRPNVDYYRMDGDTSVENRDILCKKFNS--NPTSKVFLLTHKVGGLGLNLT 1117

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRVI++  + NP++D Q++YR +R+GQ +  + YRL++ GTMEEKIY R V K  ++ 
Sbjct: 1118 GANRVILIGSNHNPSHDSQSLYRVYRFGQERKCYVYRLVSLGTMEEKIYHRCVLKLSISG 1177

Query: 1278 RVVDRQQVHRTISKEEMLHLFEFGDD----ENPDP 1308
             VVD+    R     ++  ++++  D    E P P
Sbjct: 1178 TVVDKLHFDRRYKTTDLKEMYKYDFDKYNSERPIP 1212


>gi|157126405|ref|XP_001654622.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti]
 gi|108873308|gb|EAT37533.1| AAEL010499-PA, partial [Aedes aegypti]
          Length = 1374

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/613 (35%), Positives = 338/613 (55%), Gaps = 38/613 (6%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            +R+   + +K+K HQ  G++FM++       K +S   G GCILAH MGLGKT QV+A +
Sbjct: 443  IRVHPELVSKMKPHQKEGVKFMYDCCYGGSSKGRS--SGSGCILAHCMGLGKTMQVLALV 500

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWR---PSELKPLRVFMLEDVSR-DRRAE 829
             T +    L  +  ++V P + + NW QE   W    PS +  ++VF L D S   ++ E
Sbjct: 501  NTVICYPQLNTKRIIVVCPKSTVMNWAQEIRYWLGDIPSGVS-VQVFHLPDSSNIYKKME 559

Query: 830  LLAKWRAKGG----VFLIGYTAFRNLSF-------GKHVKDRNMAREICHALQDGPDILV 878
            +L  +    G      LIGY AFR+L F       G+   DR         +  G D++V
Sbjct: 560  VLRGFHNATGKNAHCLLIGYEAFRSLVFYDARNKNGEQHSDRIRTEVRRILINPGADLIV 619

Query: 879  CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFR 938
             DE H+IKN ++ T  ++ +V  +RRI LTG+P+QNNL EY+CMV FV+  +LG   EF 
Sbjct: 620  LDEGHIIKNRKSQTNLSVSEVATKRRIILTGTPIQNNLNEYFCMVSFVKPAYLGDEREFN 679

Query: 939  NRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITV 998
             ++  PI++GQH +S+  D++ M  +S IL + L  FVQR + +V++  LP K  +V+ V
Sbjct: 680  EQYARPIKDGQHKDSSPSDIRYMKTKSFILNKHLTSFVQRKEFSVLEGFLPEKYEYVLYV 739

Query: 999  KLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPS 1058
             L+P+Q  LY+++L  + F  D        ++    Y  + +IW HP +L+    K + +
Sbjct: 740  PLTPVQEDLYEQYLQRNPFRKDVGG-----RNLLEDYTFMRKIWTHPIVLE----KAWET 790

Query: 1059 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
                +    ++      V G    + +D     ++       WW  ++ +   + L  S 
Sbjct: 791  AMKKKYGIKEKRKAARRVRGFDSSSEDDDDNDADNARSITNIWWKQIISKDDLESLYPSN 850

Query: 1119 KMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL-----------W 1167
            KM+LL +IL MC   G+K L+FS  +  L+++E+++  +    K  K            W
Sbjct: 851  KMILLFEILRMCQEKGEKCLIFSGFVMVLNMVEYFMKMIDEQSKNPKAHLYGLSRFRGPW 910

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
            + G D+YRLDG T  S R +++ +FN+P N+  +  LIST+AG  GINL  ANRV+I+D 
Sbjct: 911  RPGMDYYRLDGGTSKSTRHEMINKFNDPKNRVTRVFLISTKAGGQGINLVGANRVVILDT 970

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            SWNP  D Q I+R +R GQ KP + YRL+A  TMEEK+Y R VTK+ ++ RV D++QV R
Sbjct: 971  SWNPAVDQQGIFRIYRLGQQKPCYIYRLLAIHTMEEKVYSRAVTKQAMSHRVADKKQVDR 1030

Query: 1288 TISKEEMLHLFEF 1300
              +  E+  L+ F
Sbjct: 1031 NYNMAELEELYHF 1043


>gi|357606306|gb|EHJ65009.1| hypothetical protein KGM_07823 [Danaus plexippus]
          Length = 4282

 Score =  385 bits (988), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/496 (40%), Positives = 291/496 (58%), Gaps = 36/496 (7%)

Query: 815  RVFMLEDVSRD-RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD---RNMAREICHAL 870
            +VF L  + +   RA  L  W   GG+F+IGY  FR+LS    V D     +  +I  AL
Sbjct: 2598 KVFELSKLKKTYERAYQLEDWYNGGGIFIIGYELFRSLSTLDPVLDGVRPKVLNKIRTAL 2657

Query: 871  QD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
             D GPDI+VCDE H++KN  +    A+ +V  +RRI LTG+P+QNNL EYYCMV+FV+  
Sbjct: 2658 LDPGPDIIVCDEGHLLKNDCSILAVAMSRVVTKRRIVLTGTPMQNNLREYYCMVNFVKPN 2717

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP 989
             LGS  E+ NRF+NPI NGQH +S  ED+K+M  R+HIL++ L+G +QR + +V+   LP
Sbjct: 2718 LLGSYSEYSNRFENPIMNGQHRDSREEDIKLMKARTHILHKVLEGCLQRQEASVLYPYLP 2777

Query: 990  PKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ 1049
             K  + + + L+  Q  LYK +L  +         +  ++S    +  L ++W HP +L 
Sbjct: 2778 KKYEYTVFISLTKCQWELYKHYLTHYA--------KDTKQSVLRDFHVLQKVWTHPQVLH 2829

Query: 1050 --LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
              LTK     +R D ++           V  EK   ++D L+   +      +WW    H
Sbjct: 2830 NFLTK-----TRADEKEPK---------VKVEKIEKLDDDLEESPEHVAAAAEWWASTQH 2875

Query: 1108 EHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
             H   ELD S K +++  +L  C  +GDK L+FS S+ T+D +EF+L       ++   W
Sbjct: 2876 RHELNELDSSNKFLVVFRLLHECVQLGDKVLIFSTSLYTMDALEFFL-------RRDNKW 2928

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
              G+D+YRLDG      RQK    FN P N   K  LISTRAGSLG+N+ +ANRVII+D 
Sbjct: 2929 ALGRDYYRLDGSVPPEVRQKWCREFNAPHNTHTKLFLISTRAGSLGLNMTAANRVIIMDT 2988

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            SWNP +D+Q+I+R +R+GQ K  + YRL+A GTME+KIY+R VTK+ +A RVVD QQ+ R
Sbjct: 2989 SWNPAHDIQSIFRVYRFGQKKDCYIYRLVAMGTMEQKIYERSVTKQAVACRVVDEQQIER 3048

Query: 1288 TISKEEMLHLFEFGDD 1303
              +  E+  L+   +D
Sbjct: 3049 HYNMAELSELYRLDED 3064



 Score =  299 bits (765), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 172/490 (35%), Positives = 263/490 (53%), Gaps = 41/490 (8%)

Query: 669  FSSKSKLMNSVTLDGDLSAGASI-EVLG--DAITGYIVN------VVREKGEEAVRIPSS 719
            F++K KL+  ++   D   G  + EVLG  + +   ++N         ++   AV +   
Sbjct: 2140 FTTKEKLLKRLSKKND---GTELREVLGCEEDVRVVVINDELCLEYDFQEKRPAVSVHPF 2196

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
             +  +KAHQ  G++ MW+   +++    +G +G GCILAH MGLGKT QV+A L+T +  
Sbjct: 2197 FTKVMKAHQYEGVKLMWDACFETVAMTSAGGEGGGCILAHCMGLGKTLQVLALLHTVLTH 2256

Query: 780  VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD-RRAELLAKWRAKG 838
              LG+R  L+  P++ + NW  E  KW       ++VF L  + +   RA  L  W   G
Sbjct: 2257 PQLGMRRVLVCCPLSTVLNWVDEIHKWIGPVTNEIKVFELSKLKKTYERAYQLEDWYNGG 2316

Query: 839  GVFLIGYTAFRNLSFGKHVKD---RNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQ 894
            G+F+IGY  FR+LS    V D     +  +I  AL D GPDI+VCDE H++KN  +    
Sbjct: 2317 GIFIIGYELFRSLSTLDPVLDGVRPKVLNKIRTALLDPGPDIIVCDEGHLLKNDCSILAV 2376

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            A+ +V  +RRI LTG+P+QNNL EYYCMV+FV+   LGS  E+ NRF+NPI NGQH +S 
Sbjct: 2377 AMSRVVTKRRIVLTGTPMQNNLREYYCMVNFVKPNLLGSYSEYSNRFENPIMNGQHRDSR 2436

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
             ED+K+M  R+HIL++ L+G +QR + +V+   LP K  + + + L+  Q  LYK +L  
Sbjct: 2437 EEDIKLMKARTHILHKVLEGCLQRQEASVLYPYLPKKYEYTVFISLTKCQWELYKHYLTH 2496

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ--LTKDKGYPSREDAEDSSSDENMD 1072
            +         +  ++S    +  L ++W HP +L   LTK     +R D ++        
Sbjct: 2497 YA--------KDTKQSVLRDFHVLQKVWTHPQVLHNFLTK-----TRADEKEPK------ 2537

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 1132
               V  EK   ++D L+   +      +WW    H H   ELD S K +++  +L  C  
Sbjct: 2538 ---VKVEKIEKLDDDLEESPEHVAAAAEWWASTQHRHELNELDSSNKFLVVFRLLHECVQ 2594

Query: 1133 MGDKSLVFSQ 1142
            +GDK    S+
Sbjct: 2595 LGDKVFELSK 2604


>gi|189239152|ref|XP_971094.2| PREDICTED: similar to Transcriptional regulator ATRX homolog
            (ATP-dependent helicase XNP) (X-linked nuclear protein)
            (dXNP) (d-xnp) [Tribolium castaneum]
          Length = 1220

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 236/695 (33%), Positives = 361/695 (51%), Gaps = 93/695 (13%)

Query: 627  GKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLS 686
            G  K ++ IR IL D EL E T++    E ER  RL       +  SK            
Sbjct: 524  GGTKGRRNIRAILSDDELNELTQQAKNEENERIMRL-------AEHSK------------ 564

Query: 687  AGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKV 746
               +IE +      +I++   + GE  V +   ++  LK HQ  GI+FMWE   +S+  +
Sbjct: 565  ---NIESIQSQHEDFILDFDVKTGEPLVTVDHKLAKMLKPHQKSGIQFMWEACYESVEIL 621

Query: 747  KSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW 806
            K+   G GCILAH MGLGKT QVI  ++T         +  L+V P++ + NWK EF K 
Sbjct: 622  KTK-PGSGCILAHCMGLGKTLQVITLIHTLFTHPVTKTKHVLVVCPLSTVINWKNEFKKA 680

Query: 807  -----RPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 861
                  P ++ P  +          +  ++  WR  GGV ++GY A++ ++  K    R 
Sbjct: 681  FKQLDNPPDIYPYWII--------EKINIIHTWRQTGGVLILGYDAYQIITNEKTAL-RI 731

Query: 862  MAREICHALQ----DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLM 917
             A E   AL+     GPD++VCDE H +KN +   TQAL +VK +RRI LTG+PLQNNL 
Sbjct: 732  TAVEKQRALEALVDPGPDLIVCDEGHQLKNGKTLKTQALMKVKTKRRIVLTGTPLQNNLK 791

Query: 918  EYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQ 977
            EYY MV FV+   LG+  E+ NRF +PI NGQ  +ST  D+K+M +R+H+L + LK  + 
Sbjct: 792  EYYFMVQFVKPHLLGTYLEYTNRFASPIMNGQFHDSTPGDIKLMKKRTHVLTKMLKNTIH 851

Query: 978  RMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA 1037
            R++ +V+   LP  T + I +KL+PLQ  LY R++DL      + SN  +  +FF  Y  
Sbjct: 852  RVEGSVLSTYLPEITDYTIFIKLTPLQIDLYTRYIDL---VTGQASN--LSSTFFHDY-- 904

Query: 1038 LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
                 + P + +  K  G     + +D++ +                             
Sbjct: 905  -----SKPTLKRKAKTAGLIENLEGDDNNVEH---------------------------I 932

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
            + DW+ +LL       ++YS K+ L+LDI++ C    +K L+F Q +  LD++E +L   
Sbjct: 933  RADWYKNLLPADVSTNINYSTKIKLILDIISECMRNNEKVLIFGQYLVELDIVEHFL--- 989

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
                KQ + W+   D+YR+DG T    R  L ++FN   N   K  L++ + G LG+NL 
Sbjct: 990  ----KQFRNWRPNVDYYRMDGDTSVENRDILCKKFNS--NPTSKVFLLTHKVGGLGLNLT 1043

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRVI++  + NP++D Q++YR +R+GQ +  + YRL++ GTMEEKIY R V K  ++ 
Sbjct: 1044 GANRVILIGSNHNPSHDSQSLYRVYRFGQERKCYVYRLVSLGTMEEKIYHRCVLKLSISG 1103

Query: 1278 RVVDRQQVHRTISKEEMLHLFEFGDD----ENPDP 1308
             VVD+    R     ++  ++++  D    E P P
Sbjct: 1104 TVVDKLHFDRRYKTTDLKEMYKYDFDKYNSERPIP 1138


>gi|147766537|emb|CAN69690.1| hypothetical protein VITISV_026776 [Vitis vinifera]
          Length = 600

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 243/404 (60%), Positives = 293/404 (72%), Gaps = 17/404 (4%)

Query: 341 KQKEIGSVDWTIEDSAVETRPLVDASKSLSNKKT--DDGDMPGNNNEVALQNLETGVLES 398
           KQ+ I   D   E+    +  L D S+++  +KT  D   +  NN++ A Q+ +T V ES
Sbjct: 41  KQETIQKEDRLAENILDNSVLLNDYSQAVLREKTRGDGVSISNNNDDGACQSSKTEVSES 100

Query: 399 SV------KERSLSNGISSV-SDSALPDSSELRGIKRSNESEEPNSEKKRSRTIIIGSD- 450
                   KER  SNG SSV S S LPDS+E +G KRS+++ E + + KR RT+II SD 
Sbjct: 101 LEMPDTLDKERPASNGNSSVLSGSVLPDSTETKGFKRSHDNGELDVDNKRFRTVIIDSDD 160

Query: 451 ---EADVVKDEC---STKLEDHSVSPENINDAATDNSLHSQSLSEKFYCTACNNVAIEVH 504
              E   V +      TK+E  SV  E   D     SL S+ ++  F+CTACN VAIEVH
Sbjct: 161 ETHEVGNVSNSLVNNMTKMEGQSVLQETEGDFVGSGSLPSKHMNGNFHCTACNKVAIEVH 220

Query: 505 PHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRN 564
            HP+L VI+C DCKCL+E+KMHVKD DCSECYC WCGRS+DLV CKSCKTLFC TC+KRN
Sbjct: 221 CHPLLKVIICGDCKCLIERKMHVKDPDCSECYCGWCGRSNDLVGCKSCKTLFCITCIKRN 280

Query: 565 ISEACLSDEVQASCWQCCCCSPSLLKRLTSELGRAMGSENLIVSSSESDSENSDADNNLK 624
           I E CLSD V+AS WQCCCCSPSLL++LTSEL +A+GS +L VSSS+SDS++SD D N+ 
Sbjct: 281 IGEECLSD-VKASGWQCCCCSPSLLQQLTSELEKAIGSSSLTVSSSDSDSDDSDEDINVA 339

Query: 625 IGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGD 684
           I  KR++KKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFS KSK+MN+ + +G+
Sbjct: 340 ISSKRRRKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSEKSKMMNAASCNGN 399

Query: 685 LSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQ 728
           LS   S+EVLGDA  GYIVNVVREKGEEAVRIP SISAKLK HQ
Sbjct: 400 LSEDTSVEVLGDASKGYIVNVVREKGEEAVRIPPSISAKLKVHQ 443



 Score = 87.4 bits (215), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 2/65 (3%)

Query: 728 QVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTA 787
           ++ GIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ    L + ++ + L +   
Sbjct: 516 KITGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ--NALESTIQDIELNIDKK 573

Query: 788 LIVTP 792
            +  P
Sbjct: 574 AVGVP 578


>gi|196003012|ref|XP_002111373.1| hypothetical protein TRIADDRAFT_55310 [Trichoplax adhaerens]
 gi|190585272|gb|EDV25340.1| hypothetical protein TRIADDRAFT_55310 [Trichoplax adhaerens]
          Length = 849

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 219/634 (34%), Positives = 332/634 (52%), Gaps = 94/634 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            I+NV R   E  + I   +   LK HQV GI+F++ N+++S ++ ++ D GLGCILAH+M
Sbjct: 226  IINVNRPASETDICISPHLIPILKTHQVAGIQFLFNNVVESFKRYRTSD-GLGCILAHSM 284

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSEL---------- 811
            GLGKT QV+AF+   +R+  L  +  L + P++ L +W  E   W PS            
Sbjct: 285  GLGKTLQVVAFIEIFLRA--LSAKCVLCIVPLSTLDHWLNEINYWLPSSTSALFSKFNYQ 342

Query: 812  KPLRVFMLED--VSRDRRAELLAKWRAKGGVFLIGYTAFR----------NLSFGKHVK- 858
            +P +V+ +     S   RA ++ +WR  GGV +IGY  +R          N   G+ V  
Sbjct: 343  RPFKVYQISSNCKSLKDRANIINEWRNIGGVLIIGYDMYRILMTMSAYQNNTKKGEEVAS 402

Query: 859  -------DRNMAREICHALQD--------GPDILVCDEAHMIKNTRADTTQALKQVKCQR 903
                   D ++  E    ++D        GPD+++CDE H++KN     T+ LK++K +R
Sbjct: 403  PDSMEIADLDLIEEKSQYIKDIRLALSDPGPDLVICDEGHILKNAATSVTKTLKEIKTKR 462

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            RI LTG P+QNNL+EY+CMVDFVR  +LG   +F N F+ PI NG+  +ST  D+K M  
Sbjct: 463  RIVLTGYPIQNNLIEYWCMVDFVRPNYLGDKKQFSNMFERPIANGECVDSTPNDIKKMRF 522

Query: 964  RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS 1023
            RS++L + LKGFVQR    ++K  L PK  +V+ +++SP+Q +LY  F++     N    
Sbjct: 523  RSYVLQKMLKGFVQRRSQKILKDALLPKKEYVLLIRMSPIQEKLYSTFMECVIKKNWTKI 582

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSREDAEDSSSDENMDYNVVIGEK 1080
            + KI  +    +  L ++WNHP +L    + +DK Y       D  +D + D  + +G  
Sbjct: 583  SLKIGANVLLAFSVLYKVWNHPDVLHQAIMQQDKTY-----QYDILNDADRDLELELGAN 637

Query: 1081 PRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVF 1140
              N N  + G ++    ++          T K  D                     S+ +
Sbjct: 638  TSNDNSDVHGNHETKVTRR----------TNKTEDEGS------------------SIDY 669

Query: 1141 SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRV 1200
            S + P++                   +  G   + +DG   S ER +L++ FN P N  V
Sbjct: 670  SWAFPSM-----------------AHYAPGVLEHGIDGSVPSHERSRLIDLFNSPDNNSV 712

Query: 1201 KCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGT 1260
               LISTRAG+LGINL +ANRV+I D +WNP YD QA +R +RYGQ KP + YRL+   T
Sbjct: 713  WLFLISTRAGNLGINLVAANRVVIYDSAWNPCYDNQAAFRIYRYGQKKPCYIYRLVGSNT 772

Query: 1261 MEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            ME  IYK Q+ K+GL+ R++D +      +K E+
Sbjct: 773  MEHVIYKCQIRKQGLSRRIIDERNPCAVFTKREL 806


>gi|391338185|ref|XP_003743441.1| PREDICTED: transcriptional regulator ATRX-like [Metaseiulus
            occidentalis]
          Length = 1288

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 226/643 (35%), Positives = 356/643 (55%), Gaps = 52/643 (8%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +  ++   +K HQ+ G++F +  II S+  V+ G  G G ILAH MGLGKTF  I FL
Sbjct: 40   VEVDRALVQSMKPHQIEGVKFAYNTIIGSVAHVRRGGIGSGAILAHCMGLGKTFTSICFL 99

Query: 774  YTAMRSVNLG--LRTALIVTPVNVLHNWKQEFMKW-----RPSELKPLRVFMLEDVSRDR 826
            +T + +  L   +R  +++ P NV  NW +E  +W     R         F     + DR
Sbjct: 100  HTILTNEILSSHIRKVIVLCPCNVELNWAKEIREWIDGNDRVEGEIETHEFRHAKTTGDR 159

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
              E+L  W  KGGV ++ Y+ FR ++     K + + + I   L  G D+++CDE H+IK
Sbjct: 160  -MEMLRSWHEKGGVLIMSYSMFRIMT-QMQSKLKVLRQRIL--LNPGADLVICDEGHIIK 215

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            N+R   ++ L  +K +RR+ LTG+PLQNN++EYYCM++FVR   LG+  EF  RF  PI 
Sbjct: 216  NSRTQLSKLLNSIKTRRRLILTGTPLQNNMIEYYCMMNFVRPDSLGTRAEFNERFVKPIT 275

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
             GQ  ++    V+ M  R H+L + L   V R D + +   LP K  +VI++ LS LQ +
Sbjct: 276  LGQEADADKSVVRKMKARVHVLNKALSETVHRCDYSHLAPHLPNKIEYVISIHLSKLQTK 335

Query: 1007 LYKRFLDLHGFTNDRVS-NEKIRKSFFAGYQALAQIWNHPGIL---------QLTKDKGY 1056
            LY+R+L   G  + RV+     + SF   Y  L  +W+HP +L          +  D+G 
Sbjct: 336  LYRRYL--QGIGSRRVTIRGDSQGSFLQDYHVLKMVWSHPYLLLESEKRRKKAIEADRG- 392

Query: 1057 PSREDAEDSSSD-------ENMDYNVVI------GEKPRN-MNDFLQGKNDDGFFQKDWW 1102
            P      DS S+        + DY  V+       ++ RN + +  + +++D      WW
Sbjct: 393  PDDASGTDSESEIDATEDSRSEDYRRVVRAYERRSKRKRNRIAESSEYRSED---DSSWW 449

Query: 1103 NDLL--HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
               +        +LD S K  + ++IL  C  + DK ++FS S+ +LD+ E YL +L R 
Sbjct: 450  RPHVVGKVENLLKLDLSSKFQVAMNILRGCQLVRDKVILFSTSLLSLDVFERYL-ELERY 508

Query: 1161 GKQG--------KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
             + G        + W++  D++R+DG T  + R++ +++ N+  N+R +  L+ST+AG +
Sbjct: 509  SRMGGAPKHAVSRRWERDVDYFRIDGNTSVAARERYIDQLNDSDNERARLLLVSTKAGGI 568

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G N+  ANR+I+VD SWNP+ D+QAI+R +R+GQ KPV+ YRL+AH TMEEKIY RQV K
Sbjct: 569  GTNMTGANRIIVVDVSWNPSDDIQAIFRTYRFGQKKPVYVYRLIAHATMEEKIYHRQVDK 628

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKE 1315
              LA+ VVD++ + R   K ++  ++EF  ++      A+ K+
Sbjct: 629  LALASSVVDKKHLERHFKKSDLKAMYEFKPEKKDKRTLALPKD 671


>gi|325186402|emb|CCA20908.1| transcriptional regulator ATRX putative [Albugo laibachii Nc14]
          Length = 1323

 Score =  371 bits (952), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 237/692 (34%), Positives = 359/692 (51%), Gaps = 101/692 (14%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G +AV +   ++ +LK HQV G RF+W +I        +  +G GCILA  MGLGKT QV
Sbjct: 223  GRKAVYVHKDLARRLKPHQVKGARFLWSHI-------AAEPEGTGCILADFMGLGKTLQV 275

Query: 770  IAFL--------------------------YTAMRS-VNLGLRTALIVTPVNVLHNWKQE 802
            I  +                          YT  +S    G R ALI+ P   + NW+ E
Sbjct: 276  ITVIQALLSHQKKAKDGVKRKNERYNNMLDYTDTKSNSESGHRHALILAPTICVRNWEAE 335

Query: 803  FMKWRP-SELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSF---- 853
             ++W    E++ + +  LE  SR++    R +L+ KW  +GG+ ++GY  FR L      
Sbjct: 336  LVRWLGRKEVRRIGLTTLES-SREKKMEDRIDLVRKWHQRGGILIMGYEIFRILILQGIG 394

Query: 854  ------GKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIA 906
                   K+   R M +     L D GPD++V DE H +++ ++   QAL QVK +RR+ 
Sbjct: 395  QEPIRSKKNPLSRKMIQSSVKFLCDPGPDLIVLDEGHRVRDPKSKLVQALSQVKTKRRVI 454

Query: 907  LTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSH 966
            LTG PLQN+L+EY+ MV+F R  +LGS  EF+ RF  PI+NGQ  +S++ DV++  QR+ 
Sbjct: 455  LTGYPLQNHLVEYWTMVNFARPNYLGSLDEFKTRFVQPIQNGQCVDSSAADVRLARQRAF 514

Query: 967  ILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL---HGFTNDRVS 1023
            +L + LK  V R D   +   LPPK  +V+  KLS +Q RLY+RFL+       T D  +
Sbjct: 515  LLTQDLKPLVLRRDQQYLFTQLPPKKEWVLIFKLSEIQSRLYRRFLECGVPKRSTEDLGT 574

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQ-------------LTKDKGYPSREDA-------- 1062
              K+      GY     I NHP +LQ             + K++     +D         
Sbjct: 575  GAKV--DILGGYHISLAISNHPDVLQEAFRVLENALYTGIAKNRRRKEIDDTLDLDIVDE 632

Query: 1063 --------EDSSSDENMDYNVVIGEKPRNMNDF----LQGKNDDGFFQKDWWNDLLHEHT 1110
                    E S S E   + +V  E    +ND       G + +   +  +   +  ++ 
Sbjct: 633  EEDVLLGYETSESREKNRWRMVSSESVSPVNDGNGFDAYGHSRENKHRLSFAAPVFKDYE 692

Query: 1111 YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLS----KLPRPGKQGKL 1166
            + ELD+SGKMV+L ++L  C  +GD+ +VFSQSI TL++IE +++    +L R  K+   
Sbjct: 693  HGELDFSGKMVVLFEMLEACQEIGDRVIVFSQSIATLNVIEMFIAQRNNRLRRSRKKHD- 751

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
             K      R+DG T   +R + +E+FN+P  + V    IST+AG  GINL   NR++I D
Sbjct: 752  -KAPFTSLRIDGSTSQQDRFRQIEQFNDP-EEDVDVIFISTKAGGEGINLCGGNRIVIFD 809

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 1286
              WNP  D Q++ R++R+GQTKPVF YR +A  TME+K+Y  Q+ KEG+A ++VD + + 
Sbjct: 810  VCWNPCNDAQSMCRSYRFGQTKPVFVYRFVAGATMEKKVYDLQIRKEGVAKQIVDDKALE 869

Query: 1287 RTISKEEMLHLFEFGDDENPDPLTAVSKENGQ 1318
            R   + ++   F+    E      A++ E GQ
Sbjct: 870  RKFKQGDLQKYFDLDHFEE-----ALAAEEGQ 896


>gi|328700856|ref|XP_003241405.1| PREDICTED: transcriptional regulator ATRX homolog [Acyrthosiphon
            pisum]
          Length = 1155

 Score =  355 bits (911), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 212/612 (34%), Positives = 325/612 (53%), Gaps = 61/612 (9%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V+I   ++  LK HQV GI F+W  + +++ K  + + G GC+LAH MG+GKT Q+I  +
Sbjct: 365  VKISKELAKVLKIHQVEGIHFLWNTVFETVEKTNTTE-GTGCVLAHRMGIGKTLQIITII 423

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPL------RVFMLEDVSRDRR 827
            YT +    + ++T LI+ P  +++NW  E  KW    LK +      +V+ L    +   
Sbjct: 424  YTILCHTQINIKTFLIICPPGLIYNWMDEIYKW----LKDIDIDEVVKVYDLPKTQKLYN 479

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIK 886
               +A W++KGG+ ++ Y  F++L    + K  ++     H L D GPD+++ DE H IK
Sbjct: 480  ITNIATWKSKGGILILSYENFKSLV---NCKQSDLREAFYHTLVDPGPDVVILDEGHYIK 536

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            NT+    ++L Q++ +RRI LTG+P+QN+L EY+ +V+FV+   LG+  +F   F  PI+
Sbjct: 537  NTQTILLKSLTQIRTKRRIVLTGTPMQNSLKEYHTLVEFVKPNILGNLTDFVTTFIKPID 596

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
             GQ  +S  EDVKIM QR+ IL++ L+  V R+D   +K     K  + I V L+  Q  
Sbjct: 597  AGQFIDSHDEDVKIMKQRTFILHKLLQNTVHRIDDKNLKPLFTNKIEYTIEVNLTKFQCE 656

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDKGYPSRE--DAE 1063
            LY++FL  +  +ND         + F     L  I  HP  L +L   K    RE   A 
Sbjct: 657  LYEKFLHYNKASND-------GHNVFLCLHVLTLITLHPLTLYRLKHFKNSKQRELGTAV 709

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
            D    +++ +    GE PR    F + K                         S K+  +
Sbjct: 710  DEKLSKDLSWIDSYGEDPR----FFEAKQ------------------------SNKITYV 741

Query: 1124 LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
            L+ +  CS   +K L F +S   LD +E +L       +Q K W  G+D+ R+DG+T  S
Sbjct: 742  LNTIHECSKRNEKILCFLKSPLALDALEHFL-------QQEKRWILGEDYLRMDGKTPLS 794

Query: 1184 ERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1243
             R ++ E FN P N   K  L+S   G LG N+  ANRV+++  SWNP+ DLQAIYR  R
Sbjct: 795  IRNQMCEAFNNPENT-AKVFLLSMGTGVLGYNMVGANRVLLLSTSWNPSNDLQAIYRCLR 853

Query: 1244 YGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            +GQ K V+  RL+A GT+E K Y RQ++K G+A+ VVD Q   R +S ++   LF F   
Sbjct: 854  FGQQKTVYVNRLLAKGTVEPKAYYRQISKLGMASSVVDLQHKSRKVSYDQTNDLFSFDST 913

Query: 1304 ENPDPLTAVSKE 1315
            ++ + L   +K+
Sbjct: 914  KHFNKLLPNTKD 925


>gi|224009183|ref|XP_002293550.1| hypothetical protein THAPSDRAFT_263996 [Thalassiosira pseudonana
            CCMP1335]
 gi|220970950|gb|EED89286.1| hypothetical protein THAPSDRAFT_263996 [Thalassiosira pseudonana
            CCMP1335]
          Length = 1000

 Score =  348 bits (894), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 218/614 (35%), Positives = 325/614 (52%), Gaps = 45/614 (7%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL-GCILAHTMGLGKTFQVIAF 772
            V I   ++  LK HQV G++F W+ I   +  V + D+ + G ILAH+MG+GK+ Q +  
Sbjct: 216  VSICRPLAGLLKEHQVEGVKFCWDKICSEL--VNAKDESVRGAILAHSMGVGKSIQTVCL 273

Query: 773  LYTAMR----SVNLGLRTALIVTPVNVLHNWKQEFMKW---RPSELKPLRVFMLEDVSRD 825
            L+T +     S N  ++ AL+V PVN L NW  E+ KW         P   F L D  + 
Sbjct: 274  LHTLLTHPALSSNHIVQRALLVAPVNTLANWVAEWNKWIGVASGRNCPYIRFYLWD-GKS 332

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHAL-QDGPDILVCDEAH- 883
            ++ +++  W   GGV +     F + S G  VK  N    IC AL + GPDI+V DEAH 
Sbjct: 333  KKEKIILDWYENGGVLVTASGRFTSASEGNDVKKANSDDIICKALFEPGPDIIVLDEAHT 392

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
            MIK+   + ++ L Q+K + R++LTG+PLQNNL+EYY M  + +   LG    F  ++Q 
Sbjct: 393  MIKSNTTNISKVLNQMKTRLRLSLTGTPLQNNLLEYYRMATWTKPSCLGKEASFIYKYQT 452

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            PI +G   + T     +  + S  L   L GF+ R D +V+ K LP K   +I V+ S +
Sbjct: 453  PIMDGMSRDCTPTQAAVQEELSQELSGILAGFLHRCDNSVLSKVLPFKQEAIIRVRQSKV 512

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT--KDKGYPSRED 1061
            Q +LY+ F        + +        FF  Y AL  + NHP  L  +  KD   P+   
Sbjct: 513  QVKLYREFRKYQREQGNSIG-------FFGQYHALRPVSNHPACLFSSDGKDGSRPNSPK 565

Query: 1062 AEDSSS-----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
              D +S      +N D   V  EK   + D  +  ++D    + W+   +      E+D 
Sbjct: 566  GGDVTSQSKDKSDNADKPNVAPEKYAWVCD--KSPDEDTDSGEKWYKSFVDRAEKSEMDI 623

Query: 1117 -----SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK---------LPRPGK 1162
                  GK+++LL I+  C ++GDK +VFSQ + TL  +E  L           LP    
Sbjct: 624  KAIENGGKIIVLLQIIAHCDSIGDKVVVFSQCLKTLSYVEEILQSPNWGGFQPFLPDYNG 683

Query: 1163 QGKL--WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
            + +L  W+KGK++ R+DG  ++ ER  LV+ FN       K  L+ST+AG LGINL +AN
Sbjct: 684  KQRLGGWEKGKEYLRIDGSVDARERGDLVDTFNTEAIAHSKVFLLSTQAGGLGINLVAAN 743

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            RV+++D  WNP    QA++R +R+GQTKP F YRL+A G+MEEKIY R   K  L+  V+
Sbjct: 744  RVVLLDSHWNPAISDQAVHRCYRFGQTKPTFCYRLLAEGSMEEKIYSRAAAKSSLSDLVI 803

Query: 1281 DRQQVHRTISKEEM 1294
            D++   R+ ++ EM
Sbjct: 804  DQKHPERSFTRREM 817


>gi|301604464|ref|XP_002931858.1| PREDICTED: transcriptional regulator ATRX [Xenopus (Silurana)
            tropicalis]
          Length = 2268

 Score =  348 bits (893), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 188/464 (40%), Positives = 285/464 (61%), Gaps = 19/464 (4%)

Query: 609  SSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQ 668
            S++ +SE+ D D +       K +KKIR+I+ D +L  ET+  +  E+ER++R+   + +
Sbjct: 1222 SNKGNSEDGDHDEDSDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAERERE 1281

Query: 669  FSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQ 728
               + KL     +D +  +     V     T  +++   E  E  V++   +  KLK HQ
Sbjct: 1282 ---RDKLRELQVVDTEDVSPVKCPV----TTKLVLDENEETKEALVQVHQKMVTKLKPHQ 1334

Query: 729  VVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTAL 788
            V G++FMW+   +S++K K  D G GCILAH MGLGKT QV+ FL+T + S  L   TAL
Sbjct: 1335 VDGVQFMWDCCCESMKKTKK-DPGSGCILAHCMGLGKTLQVVTFLHTVLLSEKLDFSTAL 1393

Query: 789  IVTPVNVLHNWKQEFMKWRPS--ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGY 845
            +V P+N + NW  EF KW+    + + L V  L  V R + R+ ++ +W  +GG+ +IGY
Sbjct: 1394 VVCPLNTVLNWLNEFEKWQDGMDDEEKLEVCELATVKRPQERSYMMQRWHQEGGILIIGY 1453

Query: 846  TAFRNLSFGKHVKDRNMAREICHA--LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQR 903
              +RNL+ G++VK + + +EI H   +  GPD ++CDE H++KN  +  ++A+  +K +R
Sbjct: 1454 EMYRNLTQGRNVKSKKL-KEIFHKTLVDPGPDFVICDEGHILKNELSAISKAMNSIKTRR 1512

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            RI LTG+PLQNNL+EY+CMV+F++E  LGS  EFRNRF NPI+NGQ  +ST  DV++M +
Sbjct: 1513 RIILTGTPLQNNLVEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKK 1572

Query: 964  RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTNDRV 1022
            R+HILYE L G VQR D   + K LPPK  +V++V++SPLQ +LY+ +LD L G   +  
Sbjct: 1573 RAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLSVRISPLQCKLYQYYLDHLTGAVGEGG 1632

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQL----TKDKGYPSREDA 1062
               K     F  +Q L++IW HP  LQL     ++KGY   +D+
Sbjct: 1633 VRGKSGTKLFQDFQVLSRIWTHPWCLQLDYISKENKGYFDEDDS 1676



 Score =  219 bits (559), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 107/221 (48%), Positives = 144/221 (65%), Gaps = 12/221 (5%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL----- 1154
            DW+ D + E     +++SGK++LL +IL M   +GDK LVFSQS+ +LDLIE +L     
Sbjct: 1772 DWYKDFVTEADSSIMEHSGKIMLLFEILRMAEVLGDKVLVFSQSLISLDLIEDFLELAST 1831

Query: 1155 -------SKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
                   S+ P   K    W +  D+YRLDG+T    R+K  E FN+  N R +  LIST
Sbjct: 1832 EKNEENASEKPVFYKGDGKWFRNIDYYRLDGQTSPQTRKKWAEEFNDSTNIRGRLFLIST 1891

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
            +AGSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQ KPVF YR +A GTMEEKIY 
Sbjct: 1892 KAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQIKPVFVYRFLAQGTMEEKIYD 1951

Query: 1268 RQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            RQ+ K+ L+ RV+D+QQ+ R  +  E+  L+ F  D   DP
Sbjct: 1952 RQIAKQSLSFRVIDQQQIERHFTMNELTELYTFEPDLLDDP 1992



 Score = 65.1 bits (157), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 12/106 (11%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK C          +DAD  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPALKVLICKACYKYYMSDDINRDADGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISE----ACLSDEVQASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+      A + +E++   W+C  C P  L
Sbjct: 230 CCDYCHNAFCKKCILRNLGRKELSAIMDEEMK---WECYICRPEPL 272


>gi|119181856|ref|XP_001242107.1| hypothetical protein CIMG_06003 [Coccidioides immitis RS]
 gi|392865000|gb|EAS30737.2| SNF2 family helicase/ATPase [Coccidioides immitis RS]
          Length = 2054

 Score =  344 bits (883), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 214/631 (33%), Positives = 329/631 (52%), Gaps = 85/631 (13%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  + +   I   +K HQ+ G++FMW  +I+        DK  GC+LAHTMGLGKT QVI
Sbjct: 951  EPVIYLDPHIGRLVKPHQLHGMQFMWRELIKD-------DKRQGCLLAHTMGLGKTMQVI 1003

Query: 771  AFLYTAMRSVN-------------LGLRTALIVTPVNVLHNWKQEFMKWRPSE------L 811
            +FL T  ++ N                   LI+ P +++ NW +EFM+W P +      L
Sbjct: 1004 SFLVTIAKAANSPDPEIRKQIPDCFRESRTLILCPPSLIENWSEEFMRWLPQDPATKRSL 1063

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR------NMARE 865
             P+R  +    SR+R  E+ A W  +GG+ LI Y  FR+L      K R      N    
Sbjct: 1064 GPVRKVLSNIQSRERLQEI-AAWYTEGGILLISYDIFRSLVHNASTKRRPRPLEPNQHES 1122

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            +   L +GP+I++ DEAH +KN       A    K + RIALTGSPL N+L EYY M+++
Sbjct: 1123 VKKQLLNGPNIIIADEAHKMKNRTTGIAAAACGFKSKSRIALTGSPLANHLEEYYAMINW 1182

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            +  G+LG   +F+ ++  PIE G + +ST  + +   ++  +L + L   + R D++V+ 
Sbjct: 1183 IAPGYLGDFVQFKAKYIEPIEAGLYVDSTRAERRESLKKLQVLKKDLDPKINRADISVLA 1242

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
             DLPPK  FVITV L+ LQ   YK +++    T D V++ ++    +A    L+ + NHP
Sbjct: 1243 GDLPPKVEFVITVPLTALQEEAYKLYVETLMDTGDDVASTRV----WAWLAILSLLCNHP 1298

Query: 1046 -----------------GILQLTKDKGYPSREDA-EDSSSDENMDYNVVIGEKPRNMNDF 1087
                              ++Q ++ + +P    A +DSS ++     V+  E    +   
Sbjct: 1299 SCFMEKLLGKNIDKRAKALIQDSEYESFPEDTPATQDSSPEDTPVTQVLAPETISKLKRV 1358

Query: 1088 LQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
              G ND                  K   +S +  +L  I+    N GDK L+FS SIPTL
Sbjct: 1359 FDGIND-----------------LKSTAHSHRAAMLDQIIKQSVNAGDKVLIFSHSIPTL 1401

Query: 1148 DLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
            + IE  L K+ R       W+    + RLDG T  + RQ   + FN+ ++  ++  LIST
Sbjct: 1402 NYIEDVL-KVNR-------WR----YCRLDGTTPITSRQSATKSFNK-IDSPMQVYLIST 1448

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
            +AG LG+N+  ANRV+I D ++NPT++ QA+ RA+R+GQ KPVF YR +A GT E+ +Y 
Sbjct: 1449 KAGGLGLNIPGANRVVIFDFAFNPTWEEQAVGRAYRFGQRKPVFVYRFIAGGTYEDIMYN 1508

Query: 1268 RQVTKEGLAARVVDRQQVHRTISKEEMLHLF 1298
            + V K  L+ RVVD++   R  ++ +  +LF
Sbjct: 1509 KTVFKTQLSFRVVDKKNPIRYATRSKKAYLF 1539


>gi|320034532|gb|EFW16476.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira]
          Length = 2050

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 213/631 (33%), Positives = 329/631 (52%), Gaps = 85/631 (13%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  + +   I   +K HQ+ G++FMW  +I+        DK  GC+LAHTMGLGKT QVI
Sbjct: 947  EPVIYLDPHIGRLVKPHQLHGMQFMWRELIKD-------DKRQGCLLAHTMGLGKTMQVI 999

Query: 771  AFLYTAMRSVN-------------LGLRTALIVTPVNVLHNWKQEFMKWRPSE------L 811
            +FL T  ++ N                   LI+ P +++ NW +EFM+W P +      L
Sbjct: 1000 SFLVTIAKAANSPDPEIRKQIPDCFRESRTLILCPPSLIENWSEEFMRWLPQDPATKRSL 1059

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR------NMARE 865
             P+R  +    SR+R  E+ A W  +GG+ LI Y  FR+L      K R      N    
Sbjct: 1060 GPVRKVLSNIQSRERLQEI-AAWYTEGGILLISYDIFRSLVHNASTKRRPRPLEPNQHES 1118

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            +   L +GP+I++ DEAH +KN       A    K + RIALTGSPL N+L EYY M+++
Sbjct: 1119 VKQQLLNGPNIIIADEAHKMKNRTTGIAAAACGFKSKSRIALTGSPLANHLEEYYAMINW 1178

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            +  G+LG   +F+ ++  PIE G + +ST  + +   ++  +L + L   + R D++V+ 
Sbjct: 1179 IAPGYLGDFVQFKAKYIEPIEAGLYVDSTRAERRESLKKLQVLKKDLDPKINRADISVLA 1238

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
             DLPPK  FVIT+ L+ LQ   YK +++    T D V++ ++    +A    L+ + NHP
Sbjct: 1239 GDLPPKVEFVITIPLTALQEEAYKLYVETLMDTGDDVASTRV----WAWLAILSLLCNHP 1294

Query: 1046 -----------------GILQLTKDKGYPSREDA-EDSSSDENMDYNVVIGEKPRNMNDF 1087
                              ++Q ++ + +P    A +DSS ++     V+  E    +   
Sbjct: 1295 SCFMEKLLGKNIDKRAKALIQDSEYESFPEDTPATQDSSPEDTPVTQVLAPETISKLKRV 1354

Query: 1088 LQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
              G ND                  K   +S +  +L  I+    N GDK L+FS SIPTL
Sbjct: 1355 FDGIND-----------------LKSTAHSHRAAMLDQIIKQSINAGDKVLIFSHSIPTL 1397

Query: 1148 DLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
            + IE  L K+ R       W+    + RLDG T  + RQ   + FN+ ++  ++  LIST
Sbjct: 1398 NYIEDVL-KVNR-------WR----YCRLDGTTPITNRQSATKSFNK-IDSPMQVYLIST 1444

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
            +AG LG+N+  ANRV+I D ++NPT++ QA+ RA+R+GQ KPVF YR +A GT E+ +Y 
Sbjct: 1445 KAGGLGLNIPGANRVVIFDFAFNPTWEEQAVGRAYRFGQRKPVFVYRFIAGGTYEDIMYN 1504

Query: 1268 RQVTKEGLAARVVDRQQVHRTISKEEMLHLF 1298
            + V K  L+ RVVD++   R  ++ +  +LF
Sbjct: 1505 KTVFKTQLSFRVVDKKNPIRYATRSKKAYLF 1535


>gi|303318787|ref|XP_003069393.1| SNF2 family N-terminal domain containing protein [Coccidioides
            posadasii C735 delta SOWgp]
 gi|240109079|gb|EER27248.1| SNF2 family N-terminal domain containing protein [Coccidioides
            posadasii C735 delta SOWgp]
          Length = 2054

 Score =  344 bits (882), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 213/631 (33%), Positives = 329/631 (52%), Gaps = 85/631 (13%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  + +   I   +K HQ+ G++FMW  +I+        DK  GC+LAHTMGLGKT QVI
Sbjct: 951  EPVIYLDPHIGRLVKPHQLHGMQFMWRELIKD-------DKRQGCLLAHTMGLGKTMQVI 1003

Query: 771  AFLYTAMRSVN-------------LGLRTALIVTPVNVLHNWKQEFMKWRPSE------L 811
            +FL T  ++ N                   LI+ P +++ NW +EFM+W P +      L
Sbjct: 1004 SFLVTIAKAANSPDPEIRKQIPDCFRESRTLILCPPSLIENWSEEFMRWLPQDPATKRSL 1063

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR------NMARE 865
             P+R  +    SR+R  E+ A W  +GG+ LI Y  FR+L      K R      N    
Sbjct: 1064 GPVRKVLSNIQSRERLQEI-AAWYTEGGILLISYDIFRSLVHNASTKRRPRPLEPNQHES 1122

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            +   L +GP+I++ DEAH +KN       A    K + RIALTGSPL N+L EYY M+++
Sbjct: 1123 VKQQLLNGPNIIIADEAHKMKNRTTGIAAAACGFKSKSRIALTGSPLANHLEEYYAMINW 1182

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            +  G+LG   +F+ ++  PIE G + +ST  + +   ++  +L + L   + R D++V+ 
Sbjct: 1183 IAPGYLGDFVQFKAKYIEPIEAGLYVDSTRAERRESLKKLQVLKKDLDPKINRADISVLA 1242

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
             DLPPK  FVIT+ L+ LQ   YK +++    T D V++ ++    +A    L+ + NHP
Sbjct: 1243 GDLPPKVEFVITIPLTALQEEAYKLYVETLMDTGDDVASTRV----WAWLAILSLLCNHP 1298

Query: 1046 -----------------GILQLTKDKGYPSREDA-EDSSSDENMDYNVVIGEKPRNMNDF 1087
                              ++Q ++ + +P    A +DSS ++     V+  E    +   
Sbjct: 1299 SCFMEKLLGKNIDKRAKALIQDSEYESFPEDTPATQDSSPEDTPVTQVLAPETISKLKRV 1358

Query: 1088 LQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
              G ND                  K   +S +  +L  I+    N GDK L+FS SIPTL
Sbjct: 1359 FDGIND-----------------LKSTAHSHRAAMLDQIIKQSINAGDKVLIFSHSIPTL 1401

Query: 1148 DLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
            + IE  L K+ R       W+    + RLDG T  + RQ   + FN+ ++  ++  LIST
Sbjct: 1402 NYIEDVL-KVNR-------WR----YCRLDGTTPITNRQSATKSFNK-IDSPMQVYLIST 1448

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
            +AG LG+N+  ANRV+I D ++NPT++ QA+ RA+R+GQ KPVF YR +A GT E+ +Y 
Sbjct: 1449 KAGGLGLNIPGANRVVIFDFAFNPTWEEQAVGRAYRFGQRKPVFVYRFIAGGTYEDIMYN 1508

Query: 1268 RQVTKEGLAARVVDRQQVHRTISKEEMLHLF 1298
            + V K  L+ RVVD++   R  ++ +  +LF
Sbjct: 1509 KTVFKTQLSFRVVDKKNPIRYATRSKKAYLF 1539


>gi|328872521|gb|EGG20888.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
          Length = 2077

 Score =  342 bits (877), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 202/604 (33%), Positives = 320/604 (52%), Gaps = 76/604 (12%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            + I   +S  LK HQ++G+RFMWENII          K  GCILAH+MGLGKT QVI  +
Sbjct: 1414 ILIHRQLSTLLKPHQILGVRFMWENIIA---------KEKGCILAHSMGLGKTLQVITLI 1464

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK 833
            +T ++      +  LIV P N L+NWK EF KW P +   ++V +    S + +   + K
Sbjct: 1465 HTHVQYAKTKAKYLLIV-PANTLYNWKNEFSKWLPQDANDVKVTIYMPRSTESKKREVTK 1523

Query: 834  ----WRAKGGVFLIGYTAFRNLSFGKHVKDRNMA--REICHALQDGPDILVCDEAHMIKN 887
                W + GGV L+ Y  F      +  +    +  +++ H      D++  DE H IK+
Sbjct: 1524 DINNWHSNGGVMLLTYEYFMYFYSDQESQKSTTSDFQKLIHC-----DMVFIDEGHKIKS 1578

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
                +  ++ ++K  +R+ LTG PLQNNL EYY M++F+RE +LGS+ EFR+RF  P+EN
Sbjct: 1579 QSTKSYISISKIKTDKRVILTGYPLQNNLKEYYTMINFIRENYLGSTVEFRDRFIKPVEN 1638

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            G   N+T  +   M +R   L    K F+ R+   V++K+LP K   +I+VK + +Q +L
Sbjct: 1639 GSKENATKFEYDEMRRRLSALSSLTKDFIFRLGPQVLEKELPKKIETIISVKGTEIQYKL 1698

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL------------------- 1048
                LD+           K+ K      +  + I NHP  L                   
Sbjct: 1699 ----LDILT---------KLGKRIIESQELGSLICNHPDTLLERKPLSVKDINKKSVREL 1745

Query: 1049 -QLTKDKGYPSREDAEDSSSDENMDYNVVIGE-KPRNMNDFLQGKNDDGFFQKDWWNDLL 1106
              L ++   PS +  E    DE +   + + E +   ++    G+ D   ++K       
Sbjct: 1746 RDLLRNHHLPSHDCTE---KDELVKRVLYVNECRFLAVDSPFIGELDSTVYRKGV----- 1797

Query: 1107 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1166
                   +++S KMV+L  +L  C  + ++ ++F+ SI TL+L+E++L       ++G  
Sbjct: 1798 -------IEHSTKMVILFKLLEQCVALNERVVLFTSSIATLNLLEYFLQ-----LREGFK 1845

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
            W++G D++RLDG T   +RQ ++ ++N+ L   +K  LIST+AGSLG NL    RVI+ D
Sbjct: 1846 WRQGVDYFRLDGTTRPQDRQIMIHKYND-LTNSIKLFLISTKAGSLGTNLTGGTRVILFD 1904

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 1286
              WNP ++ QA++R +R GQTKPV+ Y ++   T+EE +Y R ++K+ LA R +DR+   
Sbjct: 1905 LMWNPVHERQAVFRCFRIGQTKPVYVYTIITAATLEENMYPRLISKQQLAKRTIDREAPK 1964

Query: 1287 RTIS 1290
            RT S
Sbjct: 1965 RTPS 1968


>gi|405978815|gb|EKC43176.1| Transcriptional regulator ATRX [Crassostrea gigas]
          Length = 1876

 Score =  339 bits (870), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 161/385 (41%), Positives = 243/385 (63%), Gaps = 8/385 (2%)

Query: 669  FSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQ 728
             + K K+ N +  + D S+     +        +++   E  +  + +   +  KLK HQ
Sbjct: 919  IAEKQKIFNGIVQEVDESSPTKCPI----TKQLVLDFEEETKKPIIEVDKGLVVKLKPHQ 974

Query: 729  VVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTA 787
            V  ++F+W+   +S+++ K+ ++G GCILAH MGLGKT  +IAF++T +  S    + T 
Sbjct: 975  VEAVQFVWDCTFESVKRSKT-EEGSGCILAHCMGLGKTLSLIAFIHTVLVNSKKTKVHTC 1033

Query: 788  LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYT 846
            ++V+P+N + NW+ EF  W+    K + V+ L  V ++  RA +L  W + GGV +IGY 
Sbjct: 1034 MVVSPLNTILNWQYEFEMWQEFTKKEVDVYELSSVKQNADRAAVLKNWHSNGGVMIIGYD 1093

Query: 847  AFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRI 905
             FRNL+ G H K++N  +    +L D GPDI+VCDE H++KN ++  ++A+ ++K  RR+
Sbjct: 1094 MFRNLTQGSHCKNKNQKKIFSESLVDPGPDIIVCDEGHILKNDQSAISKAMNKIKSFRRV 1153

Query: 906  ALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRS 965
             LTG+PLQNNLMEY+CMV FV+   LG+S EFRNRF NPI NGQ  +ST+ DVKIM +R+
Sbjct: 1154 VLTGTPLQNNLMEYHCMVSFVKPNLLGTSKEFRNRFVNPITNGQCADSTAHDVKIMKRRA 1213

Query: 966  HILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNE 1025
            HIL+E+L G VQR D + + K LPPK  +VI V+LSP+Q  LY+++L L GF  D     
Sbjct: 1214 HILHEKLNGCVQRKDYSSLTKYLPPKHEYVIAVRLSPMQMSLYEKYLSLAGFGTDAAPRA 1273

Query: 1026 KIRKSFFAGYQALAQIWNHPGILQL 1050
                  FA YQAL +IW HP ++++
Sbjct: 1274 NRGARLFADYQALMRIWTHPWVMKM 1298



 Score =  207 bits (527), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 146/243 (60%), Gaps = 34/243 (13%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            +WW + +     ++++  GK+VLL +IL M   +GDK LVFSQS+ +LDLIE +L ++ +
Sbjct: 1408 EWWAEYVKPEDEEKIELGGKLVLLFEILRMSEEIGDKVLVFSQSLLSLDLIERFLDRVDK 1467

Query: 1160 PGKQ----------------------------------GKLWKKGKDWYRLDGRTESSER 1185
              ++                                  GK W  G+D++R+DG   +  R
Sbjct: 1468 KHQEDLDKEKEKKSDEKEGDDKKSDEKKEGLNEEGESFGKHWTLGEDYFRMDGSHSAQAR 1527

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
            + +  +FN+P N + +  LIST+AG LGINL +ANRVII D SWNP++D+Q+I+R +R+G
Sbjct: 1528 KDMATKFNDPDNYQCRLFLISTKAGGLGINLVAANRVIIFDASWNPSHDVQSIFRVYRFG 1587

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            Q KPV+ YR +A GTMEEKIY+RQVTK+ L+ RVVD  Q+ R  +  E+  L+ F  D  
Sbjct: 1588 QEKPVYVYRFLAQGTMEEKIYERQVTKQSLSQRVVDEHQIDRHFNANELQELYNFKPDRL 1647

Query: 1306 PDP 1308
             DP
Sbjct: 1648 DDP 1650



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 8/118 (6%)

Query: 490 KFYCTACNNVAIEVHP------HPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRS 543
           +  CTAC    I +H       HP L V+VCK C          +DAD  +  C WC   
Sbjct: 53  RVSCTACGE-QINIHKTGSVRKHPELRVLVCKSCHKYHTSGPISRDADGLDEQCRWCSEG 111

Query: 544 SDLVSCKSCKTLFCTTCVKRNISEACLSDEVQ-ASCWQCCCCSPSLLKRLTSELGRAM 600
             L  C  C   FC TC+ RN+  + +S+  +    W+C  C  +LLK L +E  + +
Sbjct: 112 GKLFGCDFCHNAFCKTCIIRNLGRSEISNVTEDGKEWKCYVCDNTLLKPLRAECRKVL 169


>gi|258572168|ref|XP_002544846.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237905116|gb|EEP79517.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 1932

 Score =  338 bits (867), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 217/620 (35%), Positives = 323/620 (52%), Gaps = 74/620 (11%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  + +   I  ++K HQ+ G++FMW  +I+        +K  GC+LAHTMGLGKT QVI
Sbjct: 972  EPVIYLDPHIGRRVKQHQLHGMQFMWRELIKD-------EKRQGCLLAHTMGLGKTMQVI 1024

Query: 771  AFLYTAMRSVN---LGLRT----------ALIVTPVNVLHNWKQEFMKWRP------SEL 811
            + L T     N     LR            LI+ P +++ NW +EF+ WRP      S L
Sbjct: 1025 SLLVTIANVANSQDPELRKQIPDTFRESRTLILCPSSLIENWWEEFLMWRPGDPESVSNL 1084

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA------RE 865
             P+R  +L+ +    R + +A W ++GGV L+ Y  FR     +  K R  +        
Sbjct: 1085 GPIRK-ILQSMEPWERLKEIAAWHSEGGVLLLSYDIFRAFILNRATKSRGSSLGAKVHET 1143

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            I   L DGP+I+V DEAH +KN      +A    K + RIALTGSPL N+L EYY M+++
Sbjct: 1144 IKKQLLDGPNIIVADEAHKMKNRNTGIAEAASGFKSKSRIALTGSPLANHLEEYYSMINW 1203

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            +  G+LG   +F+ ++  PIE G +  ST  + +   +R  +L + L   V R D++V+K
Sbjct: 1204 IAPGYLGDFVQFKAKYVEPIEAGLYRESTRAERRESLKRLQVLKKDLDPKVNRADISVLK 1263

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
             DLPPK  FVIT+ L+ +Q   YK ++       D V N ++    +A    L+ + NHP
Sbjct: 1264 GDLPPKVEFVITLPLTAIQEEAYKIYVATLSTGKDDVPNARL----WAWLAILSLLCNHP 1319

Query: 1046 G-----ILQLTKDKGYPS-REDAEDSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
                  IL+  +DK      +D+E+ S  D+  D   +  E  + +    +G +D     
Sbjct: 1320 SCFMEKILKKNRDKKQQGVLQDSENESVIDDITDSQTLGPEVIKEVQRVFEGISD----- 1374

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
                         K    S +  +L  I+    + GDK LVFS SIPTL+ +E  L    
Sbjct: 1375 ------------LKSTALSHRATMLEQIVKESVSAGDKVLVFSHSIPTLNYLEHILK--- 1419

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
                     + G  + RLDG T  S RQ   + FN   +  ++  LIST+AG LG+N+  
Sbjct: 1420 ---------QNGWTYCRLDGTTPISSRQVATKYFNR-TDSPMQVYLISTKAGGLGLNIPG 1469

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANRVII D ++NPT++ QA+ RA+R+GQTKPVF YR ++ GT E+ +Y R V K  L+ R
Sbjct: 1470 ANRVIIFDFAFNPTWEEQAVGRAYRFGQTKPVFVYRFVSGGTYEDAMYNRTVFKTQLSFR 1529

Query: 1279 VVDRQQVHRTISKEEMLHLF 1298
            V+D++   R  SK +  +LF
Sbjct: 1530 VIDKKNPIRYASKSKKAYLF 1549


>gi|225557866|gb|EEH06151.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 1790

 Score =  337 bits (864), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 216/612 (35%), Positives = 325/612 (53%), Gaps = 74/612 (12%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            I A++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QVI+ L T   +
Sbjct: 935  IGARVKPHQLSGIQFMWRELIKD-------EKRQGCLLAHTMGLGKTMQVISLLVTIANA 987

Query: 780  -----------VNLGLRTA--LIVTPVNVLHNWKQEFMKWRPSE------LKPLRVFMLE 820
                       +   LR +  L++ P +++ NW +E + W PS+      + P R  +L 
Sbjct: 988  AASDDRRVRNQIPEALRRSRTLVLCPSSLIENWWEELLMWTPSDSQTSRNIGPFRK-ILP 1046

Query: 821  DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVK------DRNMAREICHALQDGP 874
             +  + R + +A W   GG+ L+ Y  FR L   K  K      DR     +   L +GP
Sbjct: 1047 TLQLEERLDGIASWYMDGGILLMSYDIFRALILNKATKIRPSALDRKTHETVRKHLLEGP 1106

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
             I+V DEAH +KN  A   +A ++   + RIALTGSPL NNL EYY M+D++  G+LG  
Sbjct: 1107 SIIVADEAHKLKNRNAGVAEACREFTSKSRIALTGSPLANNLSEYYAMIDWIAPGYLGDF 1166

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             +F+ ++  PI+ G + +S+  + +   ++  +L + +   + R D++V+K  LPPK  F
Sbjct: 1167 IQFKAKYIEPIQEGLYADSSQWERRQSLKKLQVLKKDIDPKLNRADISVLKGSLPPKVEF 1226

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-ILQLTKD 1053
            VITV L+PLQ + Y  ++      ND V N K+    +     L+ + NHPG  ++  +D
Sbjct: 1227 VITVPLTPLQEQAYNTYVAALAANNDNVGNPKL----WDWLSILSLLCNHPGCFMEKLRD 1282

Query: 1054 --KGY---PSREDAEDSSSDENMDYNVVIGEKPRNM--NDFLQGKNDDGFFQKDWWNDLL 1106
              KG+   PS   + DS S+   D ++     P+ +  ++ L     D     D W+   
Sbjct: 1283 RSKGFQKPPSSRVSPDSDSEIPEDPSI-----PQVLLSSEVLARIEKDFPTGMDMWS--- 1334

Query: 1107 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1166
                   L+ S +  +   I+      GDK L+FS SIPTL+ +E  L       KQ K 
Sbjct: 1335 -------LELSHRAQVADQIIERSIAAGDKVLLFSHSIPTLNYLELVL-------KQAK- 1379

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
                + + RLDG+T  + RQ   + FN   + +V   LISTRAG LG+N+  ANRVII D
Sbjct: 1380 ----RSYSRLDGKTPIATRQIATKNFNSGFDSQV--YLISTRAGGLGLNIPGANRVIIFD 1433

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 1286
              +NPT++ QA+ RA+R GQ KPV+ YR +A GT E+ ++ R V K  LA RVVD++   
Sbjct: 1434 FQFNPTWEEQAVGRAYRLGQLKPVYVYRFLAGGTYEDVMHNRAVFKTQLAFRVVDKKNPI 1493

Query: 1287 RTISKEEMLHLF 1298
            R  SK    +LF
Sbjct: 1494 RWASKNISDYLF 1505


>gi|193784122|dbj|BAG53666.1| unnamed protein product [Homo sapiens]
          Length = 1056

 Score =  337 bits (864), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 202/513 (39%), Positives = 283/513 (55%), Gaps = 65/513 (12%)

Query: 871  QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
            + GPD+++CDE H IKN +A T+QALK ++ +RR+ LTG PLQNNL+EY+CMVDFVR  F
Sbjct: 45   RPGPDVVICDEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDF 104

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 990
            LG+  EF N F+ PI NGQ  +ST +DV++M  RSH+L+  L+GFVQR    V+K  LP 
Sbjct: 105  LGTRQEFSNMFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPA 164

Query: 991  KTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-- 1048
            K   VI V+LS +QR LY +F+D      D  S+  +  +    +    +IWNHP +L  
Sbjct: 165  KEENVILVRLSKIQRDLYTQFMDRF---RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYE 221

Query: 1049 -----------------------------QLTKDKGYPSREDAEDSSSDENMDYNVVIGE 1079
                                         Q TK KG       EDS+   +M      GE
Sbjct: 222  ALQKESLANEQDLDVEELGSAGTSARCPPQGTKGKG-------EDSTLASSM------GE 268

Query: 1080 KPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 1132
                 + FLQG   + F ++       +W  DLL  +    L+ S KMVLL  ++     
Sbjct: 269  A--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVK 326

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR----LDGRTESSERQKL 1188
            +GDK LVFSQS+ TL LIE +L K   P   G   +  + W R      G T + ER++L
Sbjct: 327  LGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVRNISHFHGSTPAFERERL 386

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            + +FN+P N      L+STRAG LG+NL  ANRV++ D SWNP +D QA+ R +RYGQ K
Sbjct: 387  INQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKK 446

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            P + YRL+A  T+E+KIY RQ++K+G++ RVVD        +++E+ +L  F + E P P
Sbjct: 447  PCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPMLNFTRKEVENLLHFVEKE-PAP 505

Query: 1309 LTAVSKENGQGSSQNTNCA----LKHKLPLSHE 1337
              +++ +  + S     C     L  K P  HE
Sbjct: 506  QVSLNVKGIKESVLQLACLKYPHLITKEPFEHE 538


>gi|325095597|gb|EGC48907.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H88]
          Length = 1787

 Score =  336 bits (862), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 216/612 (35%), Positives = 325/612 (53%), Gaps = 74/612 (12%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            I A++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QVI+ L T   +
Sbjct: 935  IGARVKPHQLNGIQFMWRELIKD-------EKRQGCLLAHTMGLGKTMQVISLLVTIANA 987

Query: 780  -----------VNLGLRTA--LIVTPVNVLHNWKQEFMKWRPSE------LKPLRVFMLE 820
                       +   LR +  L++ P +++ NW +E + W PS+      + P R  +L 
Sbjct: 988  AASDDPRVRNQIPKALRRSRTLVLCPSSLIENWWEELLMWTPSDSQTNRNIGPFRK-ILP 1046

Query: 821  DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVK------DRNMAREICHALQDGP 874
             +  + R + +A W   GG+ L+ Y  FR L   K  K      DR     +   L +GP
Sbjct: 1047 TLQLEERLDGIASWYMDGGILLMSYDIFRALILNKATKIRPSALDRKTHETVRKHLLEGP 1106

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
             I+V DEAH +KN  A   +A ++   + RIALTGSPL NNL EYY M+D++  G+LG  
Sbjct: 1107 RIIVADEAHKLKNRNAGVAEACREFTSKSRIALTGSPLANNLSEYYAMIDWIAPGYLGDF 1166

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             +F+ ++  PI+ G + +S+  + +   ++  +L + +   + R D++V+K  LPPK  F
Sbjct: 1167 IQFKAKYIEPIQEGLYADSSQWERRQSLKKLQVLKKDIDPKLNRADISVLKGSLPPKVEF 1226

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-ILQLTKD 1053
            VITV L+PLQ + Y  ++      ND V N K+    +     L+ + NHPG  ++  +D
Sbjct: 1227 VITVPLTPLQEQAYNTYVAALAANNDNVGNPKL----WDWLSILSLLCNHPGCFMEKLRD 1282

Query: 1054 --KGY---PSREDAEDSSSDENMDYNVVIGEKPRNM--NDFLQGKNDDGFFQKDWWNDLL 1106
              KG+   PS   + DS S+   D ++     P+ +  ++ L     D     D W+   
Sbjct: 1283 RSKGFQKPPSSRVSPDSDSEIPEDPSI-----PQVLLSSEVLARIEKDFPTGMDMWS--- 1334

Query: 1107 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1166
                   L+ S +  +   I+      GDK L+FS SIPTL+ +E  L       KQ K 
Sbjct: 1335 -------LELSHRAQVADQIIERSIAAGDKVLLFSHSIPTLNYLELVL-------KQAK- 1379

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
                + + RLDG+T  + RQ   + FN   + +V   LISTRAG LG+N+  ANRVII D
Sbjct: 1380 ----RSYSRLDGKTPIATRQIATKNFNSGFDSQV--YLISTRAGGLGLNIPGANRVIIFD 1433

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 1286
              +NPT++ QA+ RA+R GQ KPV+ YR +A GT E+ ++ R V K  LA RVVD++   
Sbjct: 1434 FQFNPTWEEQAVGRAYRLGQLKPVYVYRFLAGGTYEDVMHNRAVFKTQLAFRVVDKKNPI 1493

Query: 1287 RTISKEEMLHLF 1298
            R  SK    +LF
Sbjct: 1494 RWASKNISDYLF 1505


>gi|449498752|ref|XP_002196003.2| PREDICTED: transcriptional regulator ATRX [Taeniopygia guttata]
          Length = 2383

 Score =  335 bits (860), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 193/479 (40%), Positives = 289/479 (60%), Gaps = 30/479 (6%)

Query: 608  SSSE----SDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLK 663
            SSSE    S+SEN D D++   G   K +KKIR+I+ D +L  ET+  +  E+ER++R+ 
Sbjct: 1345 SSSENENKSNSENEDNDDSKSPG---KGRKKIRKIIKDDKLRTETQNALKEEEERRKRIA 1401

Query: 664  SLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAK 723
              + +     +++       ++   + ++      T  +++   E  E  V++  SI  +
Sbjct: 1402 EREREREKLREVI-------EIEDASPLKC--PITTKLVLDEDEETKEPLVQVHRSIVTR 1452

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            LK HQV G++FMW+   +S++K K+   G GCILAH MGLGKT QV++FL+T +    L 
Sbjct: 1453 LKPHQVDGVQFMWDCCCESVKKTKTS-PGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLD 1511

Query: 784  LRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGV 840
             RT L+V P+N   NW  EF KW+    + + L V+ L  V R + R+ +L  W+ +GGV
Sbjct: 1512 FRTGLVVCPLNTALNWLNEFEKWQEGLEDEEKLEVYELATVKRPQERSYMLQHWQDEGGV 1571

Query: 841  FLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQV 899
             +IGY  +RNL+ G++VK R +      AL D GPD +VCDE H++KN  +  ++A+  +
Sbjct: 1572 MIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSI 1631

Query: 900  KCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVK 959
            K +RRI LTG+PLQNNL+EY+CMV+F++E  LGS  EFRNRF NPI+NGQ  +ST  DV+
Sbjct: 1632 KSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTPVDVR 1691

Query: 960  IMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD--LHGF 1017
            +M +R+HILYE L G VQR D   + K LPPK  +V+ V+++P+Q +LY+ +LD      
Sbjct: 1692 VMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVG 1751

Query: 1018 TNDRVSNEKIRKSFFAGYQALAQIWNHPGILQL----TKDKGYPSREDAED---SSSDE 1069
              +     K     F  +Q L++IW HP  LQL     ++KGY   +  +D   S SDE
Sbjct: 1752 GGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSDE 1810



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 112/224 (50%), Positives = 148/224 (66%), Gaps = 11/224 (4%)

Query: 1095 GFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL 1154
            G    DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L
Sbjct: 1888 GSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFL 1947

Query: 1155 ----------SKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTL 1204
                       + P    +GK W +  D+YRLDG T +  R+K  E FN+  N R +  +
Sbjct: 1948 ELANREKSERDQPPIYKGEGK-WFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFI 2006

Query: 1205 ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEK 1264
            IST+AGSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQ KPVF YR +A GTME+K
Sbjct: 2007 ISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLAQGTMEDK 2066

Query: 1265 IYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            IY RQVTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2067 IYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2110



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 493 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK C          +D+D  +  C WC    +L+
Sbjct: 116 CTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLI 175

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 176 CCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVT 223


>gi|66800837|ref|XP_629344.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
 gi|60462710|gb|EAL60912.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
          Length = 2205

 Score =  331 bits (848), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 213/589 (36%), Positives = 326/589 (55%), Gaps = 57/589 (9%)

Query: 709  KGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ 768
            KGE+ +  P  I   LK HQ  G++F+W+N++          KG GCILAH+MGLGK+ Q
Sbjct: 1499 KGEDILLDPE-IGCFLKPHQHSGVQFLWDNMVF---------KGKGCILAHSMGLGKSLQ 1548

Query: 769  VIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKP--LRVFMLEDVSRDR 826
            VIAFL+T  R  + G +  LIV P N L+NW++EF KW P   K   +RVF        R
Sbjct: 1549 VIAFLHTHNR-YHKGTKYLLIV-PANTLYNWEKEFKKWLPKSEKSTNIRVFAPRHKDLVR 1606

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
            R      W + GGV  + + +F + +  +H+K+R+ +  I   L+   D L+ DE H +K
Sbjct: 1607 RFPTFDNWFSGGGVLAMTFESFSS-TINRHIKERHPS--IAKILET--DFLIVDEGHRLK 1661

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            +T+   + A   +K  R++ LTG PLQNNLMEYY M+D++R   LG+  EF++RF  PI 
Sbjct: 1662 STKTKISDAANLIKTHRKVLLTGYPLQNNLMEYYTMIDYIRPLHLGNEKEFKDRFVKPIA 1721

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP-PKTVFVITVKLSPLQR 1005
             G  + S   D+K+M  R   L   +K FVQR+   V+ +++   K+  +I VK + +Q 
Sbjct: 1722 AGTKSESNERDIKLMRGRLAALQSLIKDFVQRLGPEVLDREMQVSKSEKMILVKRTDIQS 1781

Query: 1006 RLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP-GILQ----LTKDKGYPSRE 1060
            +L +  +    F ND           FA Y+ L  + NHP G+L+    +TKD    S  
Sbjct: 1782 KLLEISIQNSNF-NDH----------FAQYEVLTVVCNHPDGLLEKKPLVTKDLEKKSIS 1830

Query: 1061 D------AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE- 1113
            +      A D  + + +  N +I ++  ++N+    K  D   Q   ++   ++  Y+  
Sbjct: 1831 ELKSILKANDVPTADIIYKNELI-QRVIHLNEI---KASD-LLQPSVFSTYFNQIGYRRG 1885

Query: 1114 -LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
             ++ S K VL   +L   +   ++ + FS SI TL+ +E+++ K     K G  WK G+D
Sbjct: 1886 IVERSNKFVLFFSMLKHFNQNNERVVTFSFSISTLNQLEYFIQK-----KLG--WKAGRD 1938

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            ++RLDG T +  RQ+L+++FN+  N  +K  LIST+AGSLG NL    RVI++D SWNP 
Sbjct: 1939 YFRLDGSTPTKTRQRLIDQFNDMAND-IKLFLISTKAGSLGTNLTGGTRVILMDLSWNPV 1997

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            +D QA+YR +R GQ   V  Y L+  GT E+K Y + + K+ L+ R VD
Sbjct: 1998 HDRQAVYRCYRMGQKNQVHVYTLVMAGTGEQKTYTQMIYKQTLSKRAVD 2046


>gi|70998502|ref|XP_753973.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293]
 gi|66851609|gb|EAL91935.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293]
          Length = 1827

 Score =  331 bits (848), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 216/610 (35%), Positives = 322/610 (52%), Gaps = 56/610 (9%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G+  + +   I  ++K HQ++GI+FMW  +IQ        +K  GC+LAHTMGLGKT QV
Sbjct: 983  GDPTIYLDPHIGQRVKPHQLIGIQFMWRELIQD-------EKQQGCLLAHTMGLGKTMQV 1035

Query: 770  IAFLYT--AMRSVN-----------LGLRTALIVTPVNVLHNWKQEFMKWRPSE--LKPL 814
            I+ L T  A  + N                 LI+ P +++ NW +EF+ W P E  + PL
Sbjct: 1036 ISLLDTISAAAASNDPKISEQVPECFHRSQTLILCPSSLIDNWYEEFLMWTPEESRIGPL 1095

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA-REICHA---- 869
            R      ++   R   ++ W  +GG+ ++ Y  FR     K  K  +   R+  HA    
Sbjct: 1096 RKVTASMIAVSERLREVSDWDKEGGILIMSYDIFRKWIHNKETKKMDKPLRDDEHANVKK 1155

Query: 870  -LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
             L +GP+I+V DEAH +KN+ +  ++A  Q + + RIALTGSPL NNL +Y+ MVD++ +
Sbjct: 1156 WLLEGPNIIVADEAHKMKNSSSGISRAAVQFRSKSRIALTGSPLANNLTDYFTMVDWIAK 1215

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
            G+LG   EF+  +  PIE G + +ST  + +   ++  +L E L+  V R  + V++ D+
Sbjct: 1216 GYLGEFPEFKANYVEPIEEGLYVDSTHYERRKSLKKLQVLKEILEPKVNRAAITVLEGDM 1275

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            PPK  FVITV L+ LQR  Y  ++D        V   K+    +     L    NHP   
Sbjct: 1276 PPKVEFVITVPLTELQRAAYDSYVDSVVQGKTEVGTAKL----WTWMAILGLCNNHPACF 1331

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
               +DK      +A+ + S  ++D  ++ G++P        G  D      +      + 
Sbjct: 1332 ---RDKLLSRANEAQSAGS--SLD-EMLPGDEPITQ----AGIPDSEKLVSEQERLFANV 1381

Query: 1109 HTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK 1168
                 L+ S +  LL  I++     GDK LVFS SIPTL+ +E  L          K+ K
Sbjct: 1382 PDMNALNLSYRAQLLDRIISESIKAGDKVLVFSHSIPTLNYVEHVL----------KISK 1431

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            +   + RLDG+T  S RQ   + FN   +++V   LISTRAG LG+N+  ANRV+I D S
Sbjct: 1432 RS--YRRLDGKTPISTRQAATKSFNTVSDEKV--YLISTRAGGLGLNIPGANRVVIFDFS 1487

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT 1288
            +NP ++ QA+ RA+R GQ KPVF YR +A GT EE IY + + K  LA RVVD++   R 
Sbjct: 1488 FNPIWEEQAVGRAYRLGQQKPVFVYRFIAGGTFEEIIYNKAIFKTQLAVRVVDKKNPIRW 1547

Query: 1289 ISKEEMLHLF 1298
             SK+   +LF
Sbjct: 1548 ASKKLNEYLF 1557


>gi|119498439|ref|XP_001265977.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181]
 gi|119414141|gb|EAW24080.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181]
          Length = 1777

 Score =  329 bits (844), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 216/610 (35%), Positives = 320/610 (52%), Gaps = 56/610 (9%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G+  + +   I  ++K HQ+ GI+FMW  +IQ        +K  GC+LAHTMGLGKT QV
Sbjct: 982  GDPTISLDPHIGQRVKPHQLNGIQFMWRELIQD-------EKQQGCLLAHTMGLGKTMQV 1034

Query: 770  IAFLYT--AMRSVN-----------LGLRTALIVTPVNVLHNWKQEFMKWRPSE--LKPL 814
            I+ L T  A  + N                 LI+ P +++ NW +EF+ W P E  + PL
Sbjct: 1035 ISLLNTISAAAASNDPKISEQVPECFHRSQTLILCPSSLIDNWYEEFLMWTPEESRIGPL 1094

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD-RNMAREICHA---- 869
            R      ++   R   ++ W  +GG+ ++ Y  FR     K  K  +   R+  HA    
Sbjct: 1095 RKVTASMIAVSERLREVSDWDKEGGILIMSYDIFRKWIHNKETKKMQKPLRDDEHANVKK 1154

Query: 870  -LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
             L +GP+I+V DEAH +KN+ +  ++A  Q + + RIALTGSPL NNL +Y+ MVD++ +
Sbjct: 1155 WLLEGPNIIVADEAHKMKNSTSGISRAAVQFRSKSRIALTGSPLANNLTDYFTMVDWIAK 1214

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
            G+LG   EF+  +  P+E G + +ST  + +   ++  +L E L+  V R  + V++ D+
Sbjct: 1215 GYLGEFPEFKANYVEPLEEGLYVDSTHYERRRSLKKLQVLKEILEPKVNRAAITVLEGDM 1274

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            PPK  FVITV L+ LQR  Y  ++D        V   K+    +     L    NHP   
Sbjct: 1275 PPKVEFVITVPLTELQRAAYDSYVDSVVQGKTEVGTAKL----WTWMAILGLCNNHPACF 1330

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
               +DK      +A+ + S  ++D  ++ G++P        G  D      +      + 
Sbjct: 1331 ---RDKLLSRANEAQRAGS--SLD-EMLPGDEPITQ----AGIPDSEKLVSEQERLFANI 1380

Query: 1109 HTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK 1168
                 L+ S +  LL  I++     GDK LVFS SIPTLD +E  L          K+ K
Sbjct: 1381 PDMNALNLSYRAQLLDRIISESIKAGDKVLVFSHSIPTLDYVEHVL----------KISK 1430

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            +   + RLDG+T  S RQ   + FN    ++V   LISTRAG LG+N+  ANRV+I D S
Sbjct: 1431 RS--YRRLDGKTPISTRQAATKSFNTVSEEKV--YLISTRAGGLGLNIPGANRVVIFDFS 1486

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT 1288
            +NP ++ QA+ RA+R GQ KPVF YR +A GT EE IY + + K  LA RVVD++   R 
Sbjct: 1487 FNPIWEEQAVGRAYRLGQQKPVFVYRFIAGGTFEEIIYNKAIFKTQLAVRVVDKKNPIRW 1546

Query: 1289 ISKEEMLHLF 1298
             SK+   +LF
Sbjct: 1547 ASKKLNEYLF 1556


>gi|171685718|ref|XP_001907800.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942820|emb|CAP68473.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1877

 Score =  329 bits (843), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 208/620 (33%), Positives = 327/620 (52%), Gaps = 89/620 (14%)

Query: 689  ASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKS 748
            A+  ++   +   IVN  ++  E  + I +   +++K HQ+ G+RFMW  ++ S      
Sbjct: 853  ATNAIVPSTMARLIVNETKKDDEPLIFINAYTGSRIKDHQIDGVRFMWNQVVVS------ 906

Query: 749  GDKGLGCILAHTMGLGKTFQVIAFLYT-----------AMRSVNLGLRTA--LIVTPVNV 795
               G GC+LAHTMGLGKT QVI  L              +  +   LR +  LI+ P  +
Sbjct: 907  ---GQGCLLAHTMGLGKTMQVITLLVVIAEAAASDDPAVVEQIPEKLRRSRTLILCPSGL 963

Query: 796  LHNWKQEFMKWRP-SELKPLRVFMLE-DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSF 853
            + NW  E   W P   L P  V+ ++  ++   R E++ KW + GGV ++GY+ F NL  
Sbjct: 964  VDNWVDEVNMWAPEGSLGP--VYKVDASLTAYVRVEVVKKWASGGGVLIVGYSLFGNL-- 1019

Query: 854  GKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQ 913
               V+D     E+   LQ+ P+I+V DE H+IKN     ++A      + RIA+TGSPL 
Sbjct: 1020 ---VEDE----ELEKLLQEKPNIVVGDETHLIKNQNTKRSRAAAHFHTKSRIAMTGSPLT 1072

Query: 914  NNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLK 973
            NN+M+YY M+++V  G+L    EFR+RF NPI+ G + +S     +   +   IL E + 
Sbjct: 1073 NNVMDYYAMINWVSPGYLSDIEEFRSRFGNPIKEGLYADSNPSAKRQARKLLVILKETMS 1132

Query: 974  GFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA 1033
              V R D+ V++ +LP K  F+I + L+PLQR LY+ ++       +RV+N  I  S  +
Sbjct: 1133 PKVHRRDVQVLRDELPTKKEFIIMLPLTPLQRTLYEIYI-------ERVNNPTITGSDRS 1185

Query: 1034 GYQA------LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDF 1087
              Q       L  +  HP I +   ++   ++  A+   S++                  
Sbjct: 1186 SAQVWSMVAKLGTVLAHPKIFKTVAERQKDAKGKAKSGKSED------------------ 1227

Query: 1088 LQGKNDDGFFQKDWWNDLLHEHTYKELD---YSGKMVLLLDILTMCSNMGDKSLVFSQSI 1144
                 D+    +D  ++LL   T +++D   +S K+V L+ +L     +GDK+L+F+QSI
Sbjct: 1228 ----EDELILPQDILSELLTPTTCRDIDNDAHSYKIVALMFLLGEFRKVGDKALIFTQSI 1283

Query: 1145 PTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVERFNEPLNKRVKCT 1203
            P LD +E              ++K+ +  Y RLDG T  + RQ  +++FN   N      
Sbjct: 1284 PALDFLE-------------SIFKRRQIGYQRLDGHTPINTRQASIKKFNS--NDSADVY 1328

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            LIST+AG +G+N++ ANRVII+D  ++PT + QAI RA+R GQTKPV+ Y LM  GT E 
Sbjct: 1329 LISTKAGGVGLNIYGANRVIILDFKYSPTDEQQAIGRAYRLGQTKPVYVYWLMIGGTFEA 1388

Query: 1264 KIYKRQVTKEGLAARVVDRQ 1283
             I+K  + K  LA+RV+D++
Sbjct: 1389 TIHKSAIFKTQLASRVIDKK 1408


>gi|296418213|ref|XP_002838736.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634697|emb|CAZ82927.1| unnamed protein product [Tuber melanosporum]
          Length = 1100

 Score =  328 bits (842), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 222/637 (34%), Positives = 329/637 (51%), Gaps = 67/637 (10%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            +N+ + K    +      +  LK HQV G+RF+W+ ++QS        +G G +LAHTMG
Sbjct: 466  INLGKYKRYNDIYFHPDFAGTLKPHQVDGVRFLWQQLVQS-------GEGRGALLAHTMG 518

Query: 763  LGKTFQVIAFLYT-----------AMRSVNLGLRTA--LIVTPVNVLHNWKQEFMKWRPS 809
            LGKT QVI FLYT               +   LR +  LI++P  ++ NW  EF KW P 
Sbjct: 519  LGKTLQVITFLYTLATAAASKQEATFGQIPEALRESKTLILSPPGLVENWWDEFQKWLPQ 578

Query: 810  --------ELKPLRVFMLED--VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD 859
                    +L  +      D  VS   R   + KW  +GGV L+GYT+FR +   K +  
Sbjct: 579  SPHERDQLDLSAIGQIYRADAIVSLTTRLSTITKWAKEGGVLLMGYTSFR-MEISKAMNL 637

Query: 860  RNMA----REICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNN 915
             N A    ++I   L + P+I++ DEAH +KN +A  +QA +  + + R+A+TGSPL NN
Sbjct: 638  NNHANYQHKQISDYLLNSPNIIIADEAHSLKNPKAQISQATRLFRSKSRVAMTGSPLSNN 697

Query: 916  LMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF 975
            LMEY+ M+D++  GFLG S EF  +F +PIE+G + +ST    +   +   +L + +   
Sbjct: 698  LMEYWTMIDWIDPGFLGPSKEFEAKFLHPIEDGLYADSTLSQRRNCLKMLTVLKKDIGPK 757

Query: 976  VQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFF 1032
            V R D+ V++KDLP KT F++ V L+P Q  +Y +F+   ++ G         K    FF
Sbjct: 758  VHRADVRVIEKDLPQKTEFLVKVPLTPWQVEMYTKFVTDPEVTGAIEGSDGKAKSGTRFF 817

Query: 1033 AGYQALAQIWNHPG-ILQLTKDKGYPS-------REDAEDSSSDENMDYNVVIGEKPRNM 1084
                 L+ I NHP   +   +++G  +       R+  +D  S E+ +   +I     + 
Sbjct: 818  DIVHLLSLICNHPMCFVDTIEERGQKAQAAVRKNRQSKQDIFSLEDEELQELIDLDDLSP 877

Query: 1085 NDFLQGKNDDGFFQKDWWNDLLHEHTY--KELDYSGKMVLLLDILTMCSNMGDKSLVFSQ 1142
            N+ L     +G  +K  W   +   T   + L +S KM LL  I+     +GDK L+FS 
Sbjct: 878  NEELL----EGASKKYAWAKEMASKTQNPRALFHSYKMQLLKSIVEHSIRLGDKILIFSH 933

Query: 1143 SIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKC 1202
             + TL+    YL KL         WK   D+ RLDG+T  S RQ   + FN   + R   
Sbjct: 934  GVYTLN----YLDKLLED------WK--IDFLRLDGKTRMSTRQSATKSFN---SGRSDV 978

Query: 1203 TLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTME 1262
             L+ST AG LG+NL  ANR+II D  W+P ++ QA+ RA+R GQ K VF YR  A GT E
Sbjct: 979  FLVSTEAGGLGLNLPGANRIIIFDFKWSPMWEEQAVGRAYRMGQKKHVFVYRFHAVGTFE 1038

Query: 1263 EKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFE 1299
            +    + + K  L +RVVD+Q   RT  K+   +L E
Sbjct: 1039 DLKRNKILFKSQLQSRVVDKQDPLRTAHKDVRQYLLE 1075


>gi|326435151|gb|EGD80721.1| serine/threonine protein kinase [Salpingoeca sp. ATCC 50818]
          Length = 4337

 Score =  328 bits (841), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 215/680 (31%), Positives = 328/680 (48%), Gaps = 71/680 (10%)

Query: 624  KIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQER--LKSLQVQFSSKSKLMNSVTL 681
            K  G+ K K K RR     ++    + K  ++K+R+E+  L SLQ  +   +K       
Sbjct: 3337 KRSGRSKDKAKKRRQRSRLKVSR-AQPKYVLKKQREEKQWLDSLQKNYDKNAKQW----- 3390

Query: 682  DGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQ 741
               L        L D      +N+   K E+ V I  S+ + L  HQ  GIRF+W N++ 
Sbjct: 3391 ---LKKQGGDAELADYDKLPYINLHGPKSEKPVEIHPSLWSILMPHQKEGIRFIWNNLVH 3447

Query: 742  SIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQ 801
            ++ + K  D G GCILAH MGLGKT Q + FL+T  R       T LIV PV+VL  W+ 
Sbjct: 3448 TVEEAKDRDAGRGCILAHGMGLGKTLQAVTFLHTVWRK---PFNTFLIVVPVSVLFYWRD 3504

Query: 802  EFMKWRPSELKPLRVFMLED-VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR 860
               +  PS   P  +      +    R   + KW  +GGV +I Y    NL     +  R
Sbjct: 3505 TIKQHWPSGSPPPPICTFSSAIPIADRPRTIRKWHKEGGVLIISYDLLVNL-----LSRR 3559

Query: 861  NMAREICHALQD--GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLME 918
            +  R + + L+    PD+L+ DE HM  N ++        +  +R++ LTG+PLQNNL+E
Sbjct: 3560 HTGRHLRYKLRQYLNPDVLIMDEGHMATNMQSIRFGIFNDMPTKRKLILTGTPLQNNLLE 3619

Query: 919  YYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQR 978
            YY ++  +R+  LGS  +F+  F  PI +GQ+ ++T    ++  +R  +L + L G + R
Sbjct: 3620 YYALLSLIRDDLLGSVDQFKKHFAIPIHDGQYADATQGQRRLYKRRLAVLNKVLSGAIHR 3679

Query: 979  MDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL 1038
                     +P +  +VI ++++ LQRRLY+  +D  G       N  +  +    ++ L
Sbjct: 3680 RIRPDGDTTVPSRREYVIMIRMTRLQRRLYREVVDHFG-------NSTVGSNLLRMWRLL 3732

Query: 1039 AQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
              +WN P ++   K                   DY  V       MN   +         
Sbjct: 3733 IGVWNAPTVVPAFK-------------------DYVHVQDRLTALMNKLPEPH------- 3766

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
                   L  +    ++ SGK+ + + ++    +   + LVF  SIP + L+   L  + 
Sbjct: 3767 -------LPLNATAIMNMSGKLAVTISLIKETVHRQQRMLVFCSSIPVIKLLSALLQSIR 3819

Query: 1159 RPGK----QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGI 1214
             P +        W + +D+  L G   + ER + + +FN  L+      +IS RAG  GI
Sbjct: 3820 LPTRNDPNNSARWHQNRDFVVLQGNDSAEERTEKIAKFNSALSN-AAIMIISHRAGRAGI 3878

Query: 1215 NLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEG 1274
            NLHSANRVI+ D  WNP  D QAI RA RYGQ  PV  YRL+A GT+E++IY++QVTKE 
Sbjct: 3879 NLHSANRVILFDVDWNPASDNQAITRAHRYGQKLPVVVYRLVARGTLEQRIYEKQVTKEV 3938

Query: 1275 LAARVVDRQ----QVHRTIS 1290
            L+ R+VDR+     VHR  S
Sbjct: 3939 LSQRLVDRKFVRHDVHRATS 3958


>gi|159126293|gb|EDP51409.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163]
          Length = 1827

 Score =  328 bits (840), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 216/610 (35%), Positives = 320/610 (52%), Gaps = 56/610 (9%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G+  + +   I  ++K HQ+ GI+FMW  +IQ        +K  GC+LAHTMGLGKT QV
Sbjct: 983  GDPTIYLDPHIGQRVKPHQLNGIQFMWRELIQD-------EKQQGCLLAHTMGLGKTMQV 1035

Query: 770  IAFLYT--AMRSVN-----------LGLRTALIVTPVNVLHNWKQEFMKWRPSE--LKPL 814
            I+ L T  A  + N                 LI+ P +++ NW +EF+ W P E  + PL
Sbjct: 1036 ISLLDTISAAAASNDPKISEQVPECFHRSQTLILCPSSLIDNWYEEFLMWTPEESRIGPL 1095

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA-REICHA---- 869
            R      ++   R   ++ W  +GG+ ++ Y  FR     K  K  +   R+  HA    
Sbjct: 1096 RKVTASMIAVSERLREVSDWDKEGGILIMSYDIFRKWIHNKETKKMDKPLRDDEHANVKK 1155

Query: 870  -LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
             L +GP+I+V DEAH +KN+ +  ++A  Q + + RIALTGSPL NNL +Y+ MVD++ +
Sbjct: 1156 WLLEGPNIIVADEAHKMKNSSSGISRAAVQFRSKSRIALTGSPLANNLTDYFTMVDWIAK 1215

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
            G+LG   EF   +  PIE G + +ST  + +   ++  +L E L+  V R  + V++ D+
Sbjct: 1216 GYLGEFPEFNANYVEPIEEGLYVDSTHYERRKSLKKLQVLKEILEPKVNRAAITVLEGDM 1275

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            PPK  FVITV L+ LQR  Y  ++D        V   K+    +     L    NHP   
Sbjct: 1276 PPKVEFVITVPLTELQRAAYDSYVDSVVQGKTEVGTAKL----WTWMAILGLCNNHPACF 1331

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
               +DK      +A+ + S  ++D  ++ G++P        G  D      +      + 
Sbjct: 1332 ---RDKLLSRANEAQSAGS--SLD-EMLPGDEPITQ----AGIPDSEKLVSEQERLFANV 1381

Query: 1109 HTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK 1168
                 L+ S +  LL  I++     GDK LVFS SIPTL+ +E  L          K+ K
Sbjct: 1382 PDMNALNLSYRAQLLDRIISESIKAGDKVLVFSHSIPTLNYVEHVL----------KISK 1431

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            +   + RLDG+T  S RQ   + FN   +++V   LISTRAG LG+N+  ANRV+I D S
Sbjct: 1432 RS--YRRLDGKTPISTRQAATKSFNTVSDEKV--YLISTRAGGLGLNIPGANRVVIFDFS 1487

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT 1288
            +NP ++ QA+ RA+R GQ KPVF YR +A GT EE IY + + K  LA RVVD++   R 
Sbjct: 1488 FNPIWEEQAVGRAYRLGQQKPVFVYRFIAGGTFEEIIYNKAIFKTQLAVRVVDKKNPIRW 1547

Query: 1289 ISKEEMLHLF 1298
             SK+   +LF
Sbjct: 1548 ASKKLNEYLF 1557


>gi|345807582|ref|XP_860124.2| PREDICTED: transcriptional regulator ATRX isoform 6 [Canis lupus
            familiaris]
          Length = 2451

 Score =  327 bits (838), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 167/371 (45%), Positives = 237/371 (63%), Gaps = 17/371 (4%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1493 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1551

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1552 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1611

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1612 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1671

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1672 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1731

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1732 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1791

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE----KIRKSFFAGYQALAQIWNHPGILQ 1049
            V+ V+++P+Q +LY+ +LD L G  N   SNE    K     F  +Q L++IW HP  LQ
Sbjct: 1792 VLAVRMTPIQCKLYQYYLDHLTGVGN---SNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQ 1848

Query: 1050 L----TKDKGY 1056
            L     ++KGY
Sbjct: 1849 LDYISKENKGY 1859



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1959 DWYKDFVTDADAEILEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2018

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2019 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2078

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2079 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2138

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2139 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2177



 Score = 64.7 bits (156), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 12/136 (8%)

Query: 471 ENINDAATDNSLHSQSLSEK------FYCTACNNVAIE-----VHPHPILNVIVCKDCKC 519
           E+ ++  ++N +  QSL ++        CTAC           ++ HP L V++CK+C  
Sbjct: 104 EDASNENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCFK 163

Query: 520 LLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEV-QASC 578
                   +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS  + + + 
Sbjct: 164 YYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQ 223

Query: 579 WQCCCCSPSLLKRLTS 594
           W C  C P  L  L +
Sbjct: 224 WYCYICHPEPLLDLVT 239


>gi|74007779|ref|XP_538084.2| PREDICTED: transcriptional regulator ATRX isoform 1 [Canis lupus
            familiaris]
          Length = 2489

 Score =  327 bits (837), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 167/371 (45%), Positives = 237/371 (63%), Gaps = 17/371 (4%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1531 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1589

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1590 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1649

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1650 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1709

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1710 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1769

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1770 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1829

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE----KIRKSFFAGYQALAQIWNHPGILQ 1049
            V+ V+++P+Q +LY+ +LD L G  N   SNE    K     F  +Q L++IW HP  LQ
Sbjct: 1830 VLAVRMTPIQCKLYQYYLDHLTGVGN---SNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQ 1886

Query: 1050 L----TKDKGY 1056
            L     ++KGY
Sbjct: 1887 LDYISKENKGY 1897



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1997 DWYKDFVTDADAEILEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2056

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2057 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2116

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2117 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2176

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2177 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2215



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 277


>gi|327351004|gb|EGE79861.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188]
          Length = 1775

 Score =  327 bits (837), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 210/607 (34%), Positives = 321/607 (52%), Gaps = 59/607 (9%)

Query: 718  SSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM 777
            S I A++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QVI+ L +  
Sbjct: 938  SYIGARVKPHQLSGIQFMWRELIKD-------EKRQGCLLAHTMGLGKTMQVISLLVSIA 990

Query: 778  RSV-------------NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF-----ML 819
             +               L L   L++ P +++ NW +E   W P++    R       +L
Sbjct: 991  NAAASDDPAVRNQIPKELQLSRTLVLCPSSLIENWWEELCIWTPNDPTTSRNIGPFHKIL 1050

Query: 820  EDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA------REICHALQDG 873
              +  + R E ++ W  KGG+ L+ Y  FR L   K  K+R  A       ++   L +G
Sbjct: 1051 PTLQIEERLEGISSWYKKGGILLMSYDIFRALVLNKATKNRPPALDSRAHEKVRKHLLEG 1110

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
            P I+V DEAH +KN  A   +A +    + RIALTGSPL NNL EYY M+D++  G+LG 
Sbjct: 1111 PRIIVADEAHKLKNRNAGVAEACRAFVSKSRIALTGSPLANNLSEYYAMIDWIAPGYLGD 1170

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
              +F+ ++  PI+ G + +S+  + +   ++  +L + +   + R D++V+K  LP K  
Sbjct: 1171 FVQFKAKYIEPIQEGLYADSSQWERRQSLKKLQVLKKDIDPKLNRADISVLKGSLPQKVE 1230

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-ILQLTK 1052
            FVITV L+PLQ + Y  ++   G   D V N ++    +     L+ + NHPG  ++  +
Sbjct: 1231 FVITVPLTPLQEQAYNAYIAALG-AYDSVGNPRL----WDWLSILSLLCNHPGCFMEKLR 1285

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 1112
            D+   S+   +  SS  + D +  I E P   +  L  +   G  +K +  D+       
Sbjct: 1286 DR---SKGPQKPPSSRASPDTDSEIPEDPSIPHVLLSSEILSG-LEKIFTTDM----DMW 1337

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
             L+ S + ++   I+      GDK L+FS SIPTL+ +E  L             + G+ 
Sbjct: 1338 SLELSHRALVADQIIERSIAAGDKVLLFSHSIPTLNYLEQVLR------------QAGRT 1385

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            + RLDG+T  + RQ   + FN   N +V   LISTRAG LG+N+  ANRVII D  +NPT
Sbjct: 1386 YSRLDGKTPVATRQVATKNFNSDSNTQV--YLISTRAGGLGLNIPGANRVIIFDFQFNPT 1443

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 1292
            ++ QA+ RA+R GQ KPV+ YR +A GT E+ ++ R V K  LA RVVD++   R  SK 
Sbjct: 1444 WEEQAVGRAYRLGQLKPVYVYRFLAGGTYEDIMHNRAVFKTQLAFRVVDKKNPIRWASKN 1503

Query: 1293 EMLHLFE 1299
               +LF+
Sbjct: 1504 VRDYLFK 1510


>gi|449675916|ref|XP_002160992.2| PREDICTED: transcriptional regulator ATRX-like, partial [Hydra
            magnipapillata]
          Length = 1143

 Score =  327 bits (837), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 175/453 (38%), Positives = 274/453 (60%), Gaps = 29/453 (6%)

Query: 617  SDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLM 676
            SD D+++K     K +KKIR+IL D EL EET R   +E++R++RL              
Sbjct: 374  SDLDSDIK--APSKGRKKIRKILKDNELNEETIRAREVEEQRKKRL-------------- 417

Query: 677  NSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEA-VRIPSSISAKLKAHQVVGIRFM 735
                L+       + E +  A  G  V + R   ++A V +  +I+  LK HQ  G++FM
Sbjct: 418  ----LERINEEKKNFEHIISAEDGEFV-LERNTDQQALVSVNIAINKHLKPHQRKGVQFM 472

Query: 736  WENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNV 795
            ++  I+S++  K GD+G GC+LAH MGLGKT Q++AF++T + S N+ ++T +++ P+N 
Sbjct: 473  YDCCIESVKNFKKGDEGGGCLLAHCMGLGKTLQIVAFIHTMINSKNIQMKTFIVIAPLNT 532

Query: 796  LHNWKQEFMKWRPSELKPLRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSF 853
            + NW+QEF KW   + + + +++L   ++D+  R  +L  W   GGV ++GY  +RNL  
Sbjct: 533  VLNWEQEFEKWLTKD-EQINIYVLS-YAKDKKERVSILRDWYKCGGVLILGYEMYRNLVN 590

Query: 854  GKHVKDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPL 912
            G H++ +    E+   L + GP+++VCDE H+++N  +  ++A+  +  +RRI LTG+PL
Sbjct: 591  GTHIRSKKTRDEVKKFLVEPGPELVVCDEGHVLRNVTSAISKAVNSIATKRRIVLTGTPL 650

Query: 913  QNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQL 972
            QNNL EY+CMVDFV+   LG+  EF NRF NPI+NGQ +NST  DV++M QR H+LY+ L
Sbjct: 651  QNNLPEYHCMVDFVKPKLLGTKKEFLNRFVNPIKNGQCSNSTPSDVRLMKQRCHVLYQML 710

Query: 973  KGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFF 1032
             G VQR D +V+   LPPK  F I V+L   Q ++YK +L+   F N    ++    S F
Sbjct: 711  SGCVQRQDYSVLTPFLPPKREFTIFVRLHEKQIQMYKYYLE--NFVNSDGQSKIKGVSLF 768

Query: 1033 AGYQALAQIWNHPGILQLTKDKGYPSREDAEDS 1065
            + +Q L++IW HP  L L +++      + EDS
Sbjct: 769  SDFQCLSKIWTHPWALHLERERQRLRDINKEDS 801



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 109/223 (48%), Positives = 149/223 (66%), Gaps = 6/223 (2%)

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
            +ND+  F+KDW++D L        + SGK++LL +IL     +GDK LVFSQS+ TL+LI
Sbjct: 920  QNDENDFEKDWYDDFLIPEDQHNNELSGKLILLCEILADAEVVGDKVLVFSQSLCTLNLI 979

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E  LS +         W  G D++R+DG T   +R +  E FN+P N+R +  LISTRAG
Sbjct: 980  EATLSDIQNDNLCK--WCHGVDYFRMDGSTSVQKRTRWAEIFNDPKNERCRLFLISTRAG 1037

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
            SLGIN+  ANRVII D SWNP++D+Q+++R +R+GQ KPV+ YR +A GTMEEKIY+RQ+
Sbjct: 1038 SLGINMVGANRVIIFDCSWNPSHDVQSVFRVYRFGQEKPVYVYRFVAQGTMEEKIYERQI 1097

Query: 1271 TKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVS 1313
            TK   A RVVD QQ+ R  S+EE+  L+ F     P+P+  VS
Sbjct: 1098 TKLATAGRVVDEQQIERHFSEEEIRELYLFA----PEPIKGVS 1136


>gi|383419373|gb|AFH32900.1| transcriptional regulator ATRX isoform 2 [Macaca mulatta]
          Length = 2450

 Score =  326 bits (836), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1493 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1551

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1552 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1611

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1612 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1671

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1672 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1731

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1732 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1791

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1792 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1851

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1852 ISKENKGY 1859



 Score =  226 bits (575), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1958 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2017

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2018 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2077

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2078 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2137

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2138 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2176



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 463 LEDHSV----SPENINDAATDNSLHSQSLSEKFYCTACNNVAIE-----VHPHPILNVIV 513
           L+D +V    S EN  +  T  SL    L     CTAC           ++ HP L V++
Sbjct: 98  LDDETVNEDASNENSENDITMQSLPKDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQVLI 157

Query: 514 CKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDE 573
           CK+C          +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS  
Sbjct: 158 CKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTI 217

Query: 574 V-QASCWQCCCCSPSLLKRLTS 594
           + + + W C  C P  L  L +
Sbjct: 218 MDENNQWYCYICHPEPLLDLVT 239


>gi|402910610|ref|XP_003917956.1| PREDICTED: transcriptional regulator ATRX isoform 2 [Papio anubis]
          Length = 2452

 Score =  326 bits (836), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1495 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1553

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1554 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1613

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1614 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1673

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1674 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1733

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1734 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1793

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1794 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1853

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1854 ISKENKGY 1861



 Score =  226 bits (575), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1960 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2019

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2020 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2079

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2080 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2139

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2140 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2178



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 13/144 (9%)

Query: 463 LEDHSVSPENINDAATDNSLHSQSLSEK------FYCTACNNVAIE-----VHPHPILNV 511
           L+D +V+ E+ ++  ++N +  QSL ++        CTAC           ++ HP L V
Sbjct: 98  LDDETVN-EDASNENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQV 156

Query: 512 IVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLS 571
           ++CK+C          +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS
Sbjct: 157 LICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELS 216

Query: 572 DEV-QASCWQCCCCSPSLLKRLTS 594
             + + + W C  C P  L  L +
Sbjct: 217 TIMDENNQWYCYICHPEPLLDLVT 240


>gi|402910608|ref|XP_003917955.1| PREDICTED: transcriptional regulator ATRX isoform 1 [Papio anubis]
          Length = 2490

 Score =  326 bits (836), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1533 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1591

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1592 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1651

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1652 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1711

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1712 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1771

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1772 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1831

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1832 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1891

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1892 ISKENKGY 1899



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1998 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2057

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2058 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2117

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2118 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2177

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2178 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2216



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273


>gi|109131301|ref|XP_001099769.1| PREDICTED: transcriptional regulator ATRX isoform 3 [Macaca mulatta]
          Length = 2452

 Score =  326 bits (836), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1495 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1553

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1554 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1613

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1614 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1673

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1674 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1733

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1734 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1793

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1794 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1853

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1854 ISKENKGY 1861



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1960 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2019

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2020 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2079

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2080 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2139

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2140 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2178



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 13/144 (9%)

Query: 463 LEDHSVSPENINDAATDNSLHSQSLSEK------FYCTACNNVAIE-----VHPHPILNV 511
           L+D +V+ E+ ++  ++N +  QSL ++        CTAC           ++ HP L V
Sbjct: 98  LDDETVN-EDASNENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQV 156

Query: 512 IVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLS 571
           ++CK+C          +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS
Sbjct: 157 LICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELS 216

Query: 572 DEV-QASCWQCCCCSPSLLKRLTS 594
             + + + W C  C P  L  L +
Sbjct: 217 TIMDENNQWYCYICHPEPLLDLVT 240


>gi|395546110|ref|XP_003774936.1| PREDICTED: transcriptional regulator ATRX [Sarcophilus harrisii]
          Length = 2465

 Score =  326 bits (836), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 180/437 (41%), Positives = 267/437 (61%), Gaps = 20/437 (4%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +KKIR+IL D +L  ET+  +  E+ER++R+   + +     +++       ++   +
Sbjct: 1447 KGRKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVI-------EIEDAS 1499

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
             I+      T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+ K K  
Sbjct: 1500 PIKC--PITTKLVLDEDEETKEPLVQVHRNMVTKLKPHQVDGVQFMWDCCCESVSKTKKS 1557

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS 809
              G GCILAH MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+  
Sbjct: 1558 -AGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQDG 1616

Query: 810  --ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
              + + L V  L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +    
Sbjct: 1617 LDDEEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIF 1676

Query: 867  CHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
              AL D GPD +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F
Sbjct: 1677 NKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNF 1736

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            ++E  LGS  EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + 
Sbjct: 1737 IKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALT 1796

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWN 1043
            K LPPK  +V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW 
Sbjct: 1797 KFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNTSEGGRGKAGAKLFQDFQMLSRIWT 1856

Query: 1044 HPGILQL----TKDKGY 1056
            HP  LQL     ++KGY
Sbjct: 1857 HPWCLQLDYISKENKGY 1873



 Score =  223 bits (567), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 109/219 (49%), Positives = 144/219 (65%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1972 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEVLGDKVLVFSQSLISLDLIEDFLELASR 2031

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
                 K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2032 EKSDDKDKPLIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2091

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQ KPV+ YR +A GTME+KIY RQ
Sbjct: 2092 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVYVYRFLAQGTMEDKIYDRQ 2151

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2152 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2190



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +DAD  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPTLKVLICKNCYKYYMSDDISRDADGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + S W C  C P  L  L +
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSAIMDENSQWYCYICRPEPLLDLVT 277


>gi|46487453|gb|AAS99124.1| alpha thalassaemia mental retardation X-linked protein [Macropus
            eugenii]
          Length = 2464

 Score =  326 bits (836), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 180/437 (41%), Positives = 267/437 (61%), Gaps = 20/437 (4%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +KKIR+IL D +L  ET+  +  E+ER++R+   + +     +++       ++   +
Sbjct: 1446 KGRKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVI-------EIEDAS 1498

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
             I+      T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+ K K  
Sbjct: 1499 PIKC--PITTKLVLDEDEETKEPLVQVHRNMVTKLKPHQVDGVQFMWDCCCESVSKTKKS 1556

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS 809
              G GCILAH MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+  
Sbjct: 1557 -AGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQDG 1615

Query: 810  --ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
              + + L V  L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +    
Sbjct: 1616 LDDEEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIF 1675

Query: 867  CHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
              AL D GPD +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F
Sbjct: 1676 NKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNF 1735

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            ++E  LGS  EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + 
Sbjct: 1736 IKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALT 1795

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWN 1043
            K LPPK  +V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW 
Sbjct: 1796 KFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWT 1855

Query: 1044 HPGILQL----TKDKGY 1056
            HP  LQL     ++KGY
Sbjct: 1856 HPWCLQLDYISKENKGY 1872



 Score =  223 bits (569), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 109/219 (49%), Positives = 144/219 (65%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1971 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELASR 2030

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
                 K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2031 EKSDDKDKPLIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2090

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQ KPV+ YR +A GTME+KIY RQ
Sbjct: 2091 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVYVYRFLAQGTMEDKIYDRQ 2150

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2151 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2189



 Score = 67.0 bits (162), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +DAD  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPTLKVLICKNCYKYYMSDDISRDADGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + S W C  C P  L  L +
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSAIMDENSQWYCYICRPEPLLDLVT 277


>gi|334350330|ref|XP_001372327.2| PREDICTED: transcriptional regulator ATRX [Monodelphis domestica]
          Length = 2515

 Score =  326 bits (836), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 180/437 (41%), Positives = 267/437 (61%), Gaps = 20/437 (4%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +KKIR+IL D +L  ET+  +  E+ER++R+   + +     +++       ++   +
Sbjct: 1450 KGRKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVI-------EIEDAS 1502

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
             I+      T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+ K K  
Sbjct: 1503 PIKC--PITTKLVLDEDEETKEPLVQVHRNMVTKLKPHQVDGVQFMWDCCCESVSKTKKS 1560

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS 809
              G GCILAH MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+  
Sbjct: 1561 -AGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQDG 1619

Query: 810  --ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
              + + L V  L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +    
Sbjct: 1620 LDDEEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIF 1679

Query: 867  CHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
              AL D GPD +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F
Sbjct: 1680 NKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNF 1739

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            ++E  LGS  EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + 
Sbjct: 1740 IKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALT 1799

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWN 1043
            K LPPK  +V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW 
Sbjct: 1800 KFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWT 1859

Query: 1044 HPGILQL----TKDKGY 1056
            HP  LQL     ++KGY
Sbjct: 1860 HPWCLQLDYISKENKGY 1876



 Score =  223 bits (568), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 109/219 (49%), Positives = 144/219 (65%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1976 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELASR 2035

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
                 K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2036 EKSDDKDKPLIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2095

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQ KPV+ YR +A GTME+KIY RQ
Sbjct: 2096 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVYVYRFLAQGTMEDKIYDRQ 2155

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2156 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2194



 Score = 65.1 bits (157), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +DAD  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPTLKVLICKNCYKYYMSDDISRDADGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSAIMDENNQWYCYICRPEPLLDLVT 277


>gi|297304199|ref|XP_001099671.2| PREDICTED: transcriptional regulator ATRX isoform 2 [Macaca mulatta]
          Length = 2338

 Score =  326 bits (836), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1381 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1439

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1440 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1499

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1500 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1559

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1560 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1619

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1620 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1679

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1680 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1739

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1740 ISKENKGY 1747



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1846 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1905

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1906 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 1965

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 1966 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2025

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2026 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2064



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 19  CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 78

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 79  CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 126


>gi|355757487|gb|EHH61012.1| Transcriptional regulator ATRX, partial [Macaca fascicularis]
          Length = 2485

 Score =  326 bits (836), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1528 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1586

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1587 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1646

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1647 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1706

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1707 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1766

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1767 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1826

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1827 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1886

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1887 ISKENKGY 1894



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1993 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2052

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2053 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2112

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2113 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2172

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2173 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2211



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 165 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 224

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 225 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 267


>gi|403291668|ref|XP_003936900.1| PREDICTED: transcriptional regulator ATRX isoform 2 [Saimiri
            boliviensis boliviensis]
          Length = 2453

 Score =  326 bits (835), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1495 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1553

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1554 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1613

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1614 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1673

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1674 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1733

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1734 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1793

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1794 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1853

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1854 ISKENKGY 1861



 Score =  226 bits (575), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1961 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2020

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2021 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2080

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2081 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2140

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2141 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2179



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 13/144 (9%)

Query: 463 LEDHSVSPENINDAATDNSLHSQSLSEK------FYCTACNNVAIE-----VHPHPILNV 511
           L+D +V+ E+ ++  ++N +  QSL ++        CTAC           ++ HP L V
Sbjct: 98  LDDETVN-EDASNENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQV 156

Query: 512 IVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLS 571
           ++CK+C          +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS
Sbjct: 157 LICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELS 216

Query: 572 DEV-QASCWQCCCCSPSLLKRLTS 594
             + + + W C  C P  L  L +
Sbjct: 217 TIMDENNQWYCYICHPEPLLDLVT 240


>gi|402910612|ref|XP_003917957.1| PREDICTED: transcriptional regulator ATRX isoform 3 [Papio anubis]
          Length = 2338

 Score =  326 bits (835), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1381 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1439

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1440 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1499

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1500 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1559

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1560 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1619

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1620 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1679

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1680 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1739

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1740 ISKENKGY 1747



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1846 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1905

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1906 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 1965

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 1966 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2025

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2026 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2064



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 19  CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 78

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 79  CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 126


>gi|109131297|ref|XP_001099874.1| PREDICTED: transcriptional regulator ATRX isoform 4 [Macaca mulatta]
          Length = 2490

 Score =  326 bits (835), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1533 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1591

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1592 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1651

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1652 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1711

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1712 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1771

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1772 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1831

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1832 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1891

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1892 ISKENKGY 1899



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1998 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2057

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2058 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2117

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2118 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2177

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2178 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2216



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278


>gi|351712127|gb|EHB15046.1| Transcriptional regulator ATRX, partial [Heterocephalus glaber]
          Length = 2460

 Score =  326 bits (835), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1521 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1579

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1580 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLRDDEKLEV 1639

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1640 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1699

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1700 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1759

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1760 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1819

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1820 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1879

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1880 ISKENKGY 1887



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1987 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2046

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2047 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2106

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2107 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2166

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2167 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2205



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 164 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 223

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 224 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 271


>gi|403291666|ref|XP_003936899.1| PREDICTED: transcriptional regulator ATRX isoform 1 [Saimiri
            boliviensis boliviensis]
          Length = 2491

 Score =  326 bits (835), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1533 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1591

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1592 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1651

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1652 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1711

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1712 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1771

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1772 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1831

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1832 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1891

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1892 ISKENKGY 1899



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1999 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2058

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2059 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2118

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2119 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2178

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2179 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2217



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278


>gi|417414109|gb|JAA53355.1| Putative transcriptional regulator atrx-like isoform 2, partial
            [Desmodus rotundus]
          Length = 2353

 Score =  326 bits (835), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1395 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1453

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1454 HCMGLGKTLQVVSFLHTVLLCEKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1513

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1514 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1573

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1574 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1633

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1634 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1693

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1694 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1753

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1754 ISKENKGY 1761



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1861 DWYKDFVTDADAEILEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1920

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1921 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 1980

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 1981 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2040

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2041 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2079



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 16/140 (11%)

Query: 471 ENIN-DAATDNS---LHSQSLSEK------FYCTACNNVAIE-----VHPHPILNVIVCK 515
           E +N DA+ DNS   +  QSL ++        CTAC           ++ HP L V++CK
Sbjct: 4   ETVNEDASNDNSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQVLICK 63

Query: 516 DCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEV- 574
           +C          +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS  + 
Sbjct: 64  NCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMD 123

Query: 575 QASCWQCCCCSPSLLKRLTS 594
           + + W C  C P  L  L +
Sbjct: 124 ENNQWYCYICHPEPLLDLVT 143


>gi|403291670|ref|XP_003936901.1| PREDICTED: transcriptional regulator ATRX isoform 3 [Saimiri
            boliviensis boliviensis]
          Length = 2332

 Score =  326 bits (835), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1374 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1432

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1433 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1492

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1493 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1552

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1553 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1612

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1613 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1672

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1673 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1732

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1733 ISKENKGY 1740



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1840 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1899

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1900 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 1959

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 1960 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2019

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2020 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2058



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 12  CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 71

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 72  CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 119


>gi|348570638|ref|XP_003471104.1| PREDICTED: transcriptional regulator ATRX-like [Cavia porcellus]
          Length = 2518

 Score =  326 bits (835), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1560 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1618

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1619 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLRDDEKLEV 1678

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1679 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1738

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1739 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1798

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1799 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1858

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1859 VLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1918

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1919 ISKENKGY 1926



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2026 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2085

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2086 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2145

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2146 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2205

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2206 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2244



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 207 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 266

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 267 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 314


>gi|297469911|ref|XP_592333.4| PREDICTED: transcriptional regulator ATRX isoform 2 [Bos taurus]
 gi|297492975|ref|XP_002700029.1| PREDICTED: transcriptional regulator ATRX isoform 2 [Bos taurus]
 gi|296470862|tpg|DAA12977.1| TPA: ATP-dependent helicase ATRX isoform 2 [Bos taurus]
          Length = 2441

 Score =  325 bits (834), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1483 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1541

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1542 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1601

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1602 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1661

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1662 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1721

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1722 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1781

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1782 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1841

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1842 ISKENKGY 1849



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1949 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2008

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2009 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2068

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2069 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2128

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2129 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2167



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 12/136 (8%)

Query: 471 ENINDAATDNSLHSQSLSEK------FYCTACNNVAIE-----VHPHPILNVIVCKDCKC 519
           E+ ++  ++N +  QSL ++        CTAC           ++ HP L V++CK+C  
Sbjct: 105 EDASNENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCFK 164

Query: 520 LLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEV-QASC 578
                   +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS  + + + 
Sbjct: 165 YYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQ 224

Query: 579 WQCCCCSPSLLKRLTS 594
           W C  C P  L  L +
Sbjct: 225 WYCYICHPEPLLDLVT 240


>gi|338729326|ref|XP_003365870.1| PREDICTED: transcriptional regulator ATRX-like isoform 2 [Equus
            caballus]
          Length = 2451

 Score =  325 bits (834), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1493 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1551

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1552 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1611

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1612 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1671

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1672 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1731

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1732 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1791

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1792 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1851

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1852 ISKENKGY 1859



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1959 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2018

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2019 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2078

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2079 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2138

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2139 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2177



 Score = 64.7 bits (156), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 12/136 (8%)

Query: 471 ENINDAATDNSLHSQSLSEK------FYCTACNNVAIE-----VHPHPILNVIVCKDCKC 519
           E+ ++  ++N +  QSL ++        CTAC           ++ HP L V++CK+C  
Sbjct: 104 EDASNENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCFK 163

Query: 520 LLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEV-QASC 578
                   +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS  + + + 
Sbjct: 164 YYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQ 223

Query: 579 WQCCCCSPSLLKRLTS 594
           W C  C P  L  L +
Sbjct: 224 WYCYICHPEPLLDLVT 239


>gi|395856161|ref|XP_003800503.1| PREDICTED: transcriptional regulator ATRX isoform 1 [Otolemur
            garnettii]
          Length = 2483

 Score =  325 bits (834), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1525 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1583

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1584 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1643

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1644 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1703

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1704 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1763

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1764 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1823

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1824 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1883

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1884 ISKENKGY 1891



 Score =  226 bits (575), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1991 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2050

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2051 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2110

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2111 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2170

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2171 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2209



 Score = 65.1 bits (157), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + S W C  C P  L  L +
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSTIMDENSQWYCYICHPEPLLDLVT 277


>gi|395856163|ref|XP_003800504.1| PREDICTED: transcriptional regulator ATRX isoform 2 [Otolemur
            garnettii]
          Length = 2445

 Score =  325 bits (834), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1487 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1545

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1546 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1605

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1606 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1665

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1666 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1725

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1726 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1785

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1786 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1845

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1846 ISKENKGY 1853



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1953 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2012

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2013 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2072

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2073 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2132

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2133 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2171



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 12/136 (8%)

Query: 471 ENINDAATDNSLHSQSLSEK------FYCTACNNVAIE-----VHPHPILNVIVCKDCKC 519
           E+ ++  ++N +  QSL ++        CTAC           ++ HP L V++CK+C  
Sbjct: 104 EDASNENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQVLICKNCFK 163

Query: 520 LLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEV-QASC 578
                   +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS  + + S 
Sbjct: 164 YYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENSQ 223

Query: 579 WQCCCCSPSLLKRLTS 594
           W C  C P  L  L +
Sbjct: 224 WYCYICHPEPLLDLVT 239


>gi|297469909|ref|XP_002707323.1| PREDICTED: transcriptional regulator ATRX [Bos taurus]
 gi|297492973|ref|XP_002700028.1| PREDICTED: transcriptional regulator ATRX isoform 1 [Bos taurus]
 gi|296470861|tpg|DAA12976.1| TPA: ATP-dependent helicase ATRX isoform 1 [Bos taurus]
          Length = 2479

 Score =  325 bits (834), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1521 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1579

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1580 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1639

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1640 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1699

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1700 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1759

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1760 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1819

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1820 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1879

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1880 ISKENKGY 1887



 Score =  226 bits (575), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1987 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2046

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2047 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2106

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2107 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2166

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2167 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2205



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278


>gi|338729324|ref|XP_001502735.3| PREDICTED: transcriptional regulator ATRX-like isoform 1 [Equus
            caballus]
          Length = 2489

 Score =  325 bits (834), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1531 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1589

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1590 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1649

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1650 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1709

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1710 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1769

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1770 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1829

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1830 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1889

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1890 ISKENKGY 1897



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1997 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2056

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2057 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2116

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2117 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2176

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2177 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2215



 Score = 63.9 bits (154), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 277


>gi|327284355|ref|XP_003226904.1| PREDICTED: transcriptional regulator ATRX-like [Anolis carolinensis]
          Length = 2334

 Score =  325 bits (834), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 179/437 (40%), Positives = 268/437 (61%), Gaps = 21/437 (4%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +KKIR+I+ D +L  ET+  +   KE +ER + +  +   + KL   + ++ D     
Sbjct: 1316 KGRKKIRKIIKDDKLRTETQNAL---KEEEERRRRIAERERERIKLREVIEIE-DAPVKC 1371

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
             I       T  +++   E  E  V++   I  KLK HQV G++FMW+   +S++K +  
Sbjct: 1372 PI------TTKLVLDEDEETKEPIVQVHKHIVTKLKPHQVDGVQFMWDCCCESVKKTRKS 1425

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS 809
              G GCILAH MGLGKT QV++FL+T +    L  RTAL+V P+N   NW  EF KW+  
Sbjct: 1426 S-GSGCILAHCMGLGKTLQVVSFLHTILLCDKLDFRTALVVCPLNTALNWLNEFEKWQEG 1484

Query: 810  --ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
              + + L V  L  V R + R  +L +W+ +GGV +IGY  +RNL+ G++VK + +    
Sbjct: 1485 LDDNEKLEVNELATVKRPQERGYMLQRWQDEGGVMIIGYEMYRNLAQGRNVKSKKLKEIF 1544

Query: 867  CHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
              +L D GPD ++CDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F
Sbjct: 1545 NKSLVDPGPDFVICDEGHVLKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNF 1604

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            ++E  LGS  EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + 
Sbjct: 1605 IKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALT 1664

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTND-RVSNEKIRKSFFAGYQALAQIWN 1043
            K LPPK  +V+ V+++P+Q +LY+ +LD L G +++      K     F  +Q L++IW 
Sbjct: 1665 KFLPPKYEYVLAVRMTPIQCKLYQYYLDHLTGVSSEGGGGRGKAGAKLFQDFQMLSRIWT 1724

Query: 1044 HPGILQL----TKDKGY 1056
            HP  LQL     ++KGY
Sbjct: 1725 HPWCLQLDYISKENKGY 1741



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/222 (50%), Positives = 148/222 (66%), Gaps = 8/222 (3%)

Query: 1095 GFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL 1154
            G    DW+ D + E   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L
Sbjct: 1835 GSPAPDWYKDFVTEADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFL 1894

Query: 1155 SKLPRPGKQGKL--------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIS 1206
                R  ++GK         W +  D+YRLDG T +  R+K  E FN+  N R +  +IS
Sbjct: 1895 ELASRDKEEGKPIVYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDVTNVRGRLFIIS 1954

Query: 1207 TRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIY 1266
            T+AGSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTK VF YR +A GTME+KIY
Sbjct: 1955 TKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKAVFVYRFLAQGTMEDKIY 2014

Query: 1267 KRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
             RQVTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2015 DRQVTKQSLSFRVVDQQQVERHFTMNELTELYAFEPDLLDDP 2056



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP LNV++CK C          +DAD  +  C WC    +L+
Sbjct: 172 CTACGQQVNHFQKDSIYRHPTLNVLICKSCFKYYMSDDISRDADGMDEQCRWCAEGGNLI 231

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 232 CCDFCHNAFCKKCILRNLGRRELSAIMDENTQWHCYICHPEPLLDLVT 279


>gi|426257288|ref|XP_004022261.1| PREDICTED: transcriptional regulator ATRX [Ovis aries]
          Length = 2451

 Score =  325 bits (834), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1493 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1551

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1552 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1611

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1612 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1671

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1672 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1731

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1732 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1791

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1792 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1851

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1852 ISKENKGY 1859



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1959 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2018

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2019 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2078

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2079 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2138

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2139 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2177



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 277


>gi|410988896|ref|XP_004000712.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator ATRX [Felis
            catus]
          Length = 2495

 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1537 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1595

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1596 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1655

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1656 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1715

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1716 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1775

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1776 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1835

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1836 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1895

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1896 ISKENKGY 1903



 Score =  226 bits (575), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2003 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2062

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2063 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2122

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2123 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2182

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2183 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2221



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 185 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 244

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 245 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 292


>gi|338729328|ref|XP_003365871.1| PREDICTED: transcriptional regulator ATRX-like isoform 3 [Equus
            caballus]
          Length = 2286

 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1328 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1386

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1387 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1446

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1447 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1506

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1507 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1566

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1567 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1626

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1627 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1686

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1687 ISKENKGY 1694



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1794 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1853

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1854 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 1913

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 1914 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 1973

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 1974 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2012



 Score = 47.8 bits (112), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 528 KDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSP 586
           +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS  + + + W C  C P
Sbjct: 7   RDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 66

Query: 587 SLL 589
             L
Sbjct: 67  EPL 69


>gi|291407890|ref|XP_002720269.1| PREDICTED: transcriptional regulator ATRX [Oryctolagus cuniculus]
          Length = 2533

 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1575 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1633

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1634 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDEEKLEV 1693

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1694 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1753

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1754 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1813

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1814 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1873

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1874 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1933

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1934 ISKENKGY 1941



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2041 DWYKDFVTDADAEILEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2100

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2101 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2160

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2161 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2220

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2221 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2259



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 229 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 288

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 289 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 331


>gi|281353705|gb|EFB29289.1| hypothetical protein PANDA_018856 [Ailuropoda melanoleuca]
          Length = 2482

 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1524 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1582

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1583 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1642

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1643 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1702

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1703 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1762

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1763 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1822

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1823 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1882

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1883 ISKENKGY 1890



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1990 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2049

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2050 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2109

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2110 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2169

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2170 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2208



 Score = 63.5 bits (153), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 164 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 223

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 224 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 271


>gi|301786781|ref|XP_002928805.1| PREDICTED: transcriptional regulator ATRX-like [Ailuropoda
            melanoleuca]
          Length = 2488

 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1530 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1588

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1589 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1648

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1649 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1708

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1709 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1768

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1769 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1828

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1829 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1888

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1889 ISKENKGY 1896



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1996 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2055

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2056 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2115

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2116 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2175

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2176 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2214



 Score = 63.5 bits (153), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 277


>gi|440911905|gb|ELR61526.1| Transcriptional regulator ATRX, partial [Bos grunniens mutus]
          Length = 2516

 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1558 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1616

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1617 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1676

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1677 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1736

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1737 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1796

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1797 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1856

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1857 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1916

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1917 ISKENKGY 1924



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2024 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2083

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2084 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2143

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2144 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2203

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2204 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2242



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 195 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 254

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 255 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 302


>gi|198423144|ref|XP_002119349.1| PREDICTED: similar to transcriptional regulator ATRX [Ciona
            intestinalis]
          Length = 1357

 Score =  325 bits (833), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 157/345 (45%), Positives = 220/345 (63%), Gaps = 7/345 (2%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  V +  SI+  LK HQV G++FMW+N+I+S +  + G  G GCILAH MGLGKT Q I
Sbjct: 233  EPLVEVHPSITVHLKPHQVEGVQFMWDNLIESTKLAEEGTGG-GCILAHCMGLGKTLQTI 291

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML-EDVSRDRRAE 829
              ++T +RS NL ++T L+V P+N L NW  EF +W P + +PL  + L    +R  R +
Sbjct: 292  TTIHTILRSENLSIKTVLVVAPLNTLLNWMSEFDRWAPDD-EPLITYNLGAYATRKERIK 350

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNT 888
            +L KW+  GGV ++GY  FR L+ G  ++ +        AL D GPDI+VCDE H +KN+
Sbjct: 351  VLDKWKKTGGVMVLGYDMFRLLASGTRIRYKAWRESFASALLDPGPDIVVCDEGHKLKNS 410

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
             ++ +Q + ++K +RR+ LTG+PLQNNL+EY CMV+FV+   LGS  EFRNRF NPI NG
Sbjct: 411  ESNISQVMSKLKTRRRVVLTGTPLQNNLVEYQCMVNFVKPNLLGSLKEFRNRFVNPISNG 470

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            QH +ST  DV++M +RSH+L+  L+GFVQR D   + + L  K  ++I V+LSP+Q  LY
Sbjct: 471  QHLDSTDRDVRLMKKRSHVLHNMLQGFVQRKDYTSLAQYLCGKYEYIIKVRLSPVQVSLY 530

Query: 1009 KRFLDL---HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQL 1050
            + +LD     G     V         F+ YQ L +IW HP +LQL
Sbjct: 531  RHYLDTMTNRGNNPHAVQQGSRDTGLFSDYQNLMRIWTHPRVLQL 575



 Score =  190 bits (483), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 145/228 (63%), Gaps = 16/228 (7%)

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLS-- 1155
            + +W++ ++ +    + +  GK+ +L +IL +     DK LVFSQS+ +LDLIE  L+  
Sbjct: 728  ENEWYSSIVGKDVADDQNAGGKLAVLFEILRLAHECDDKILVFSQSLLSLDLIEEMLALS 787

Query: 1156 --KLPRPGKQGKL--------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
              K+    + GK+        W K  D++R+DG +    RQ+ +  FN+  ++R +  LI
Sbjct: 788  TVKVLSQLEDGKISTEIDYRKWYKNLDYFRMDGSSLGKSRQRWINEFNDETDRRARLFLI 847

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            ST+AGSLG+NL +ANRV+I D SWNP++D+Q+I+R +R+GQ K  + YRL+A GTMEEKI
Sbjct: 848  STKAGSLGVNLVAANRVVIFDASWNPSHDIQSIFRVYRFGQAKCCYIYRLIAQGTMEEKI 907

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVS 1313
            Y RQVTK+ L+ RVVD QQ++R  +  ++  L+ F    NP P  A S
Sbjct: 908  YDRQVTKQSLSFRVVDEQQINRHFTAHDLQELYTF----NPSPTPAES 951


>gi|444725320|gb|ELW65889.1| Transcriptional regulator ATRX [Tupaia chinensis]
          Length = 2452

 Score =  325 bits (832), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 235/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1493 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1551

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L    AL+V P+N   NW  EF KW+    + + L V
Sbjct: 1552 HCMGLGKTLQVVSFLHTVLLCDKLDFSIALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1611

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1612 SELATVKRPQERSFMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1671

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+ ++E  LGS 
Sbjct: 1672 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNIIKENLLGSI 1731

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1732 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1791

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N+  S   K     F  +Q L++IWNHP  LQL  
Sbjct: 1792 VLAVRMTPIQCKLYQYYLDHLTGVGNNSESGRGKAGAKLFQDFQMLSRIWNHPWCLQLDY 1851

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1852 ISKENKGY 1859



 Score =  226 bits (575), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1959 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2018

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2019 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2078

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2079 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2138

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2139 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2177



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 131 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 190

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 191 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 238


>gi|367027300|ref|XP_003662934.1| hypothetical protein MYCTH_2304143 [Myceliophthora thermophila ATCC
            42464]
 gi|347010203|gb|AEO57689.1| hypothetical protein MYCTH_2304143 [Myceliophthora thermophila ATCC
            42464]
          Length = 1828

 Score =  324 bits (830), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 207/605 (34%), Positives = 319/605 (52%), Gaps = 59/605 (9%)

Query: 699  TGYIVNVVREKGEEA-VRIPSSISAKLKAHQVVGIRFMWENII--QSIRKVKSGDKGLGC 755
            T  IVN  +E  ++A + I   I +K+K HQ+ G+RFMW  ++   S+R+        GC
Sbjct: 851  TRLIVNETKESDDQALIYINDHIGSKIKDHQIEGVRFMWNQLVVESSVRQ--------GC 902

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRS-----------VNLGLRTA--LIVTPVNVLHNWKQE 802
            +LAHTMGLGKT QVI  L     S           +   LR +  LI+ P ++L NW +E
Sbjct: 903  LLAHTMGLGKTMQVITLLVVIAESSASPDESVRSQIPEDLRESKTLILCPPSLLDNWHEE 962

Query: 803  FMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNM 862
               W P+ +      M   +    R E++  W + GG+ ++GY+ F  L     VK    
Sbjct: 963  IHMWAPNGILGPVYKMDSVIPASERMEMIQAWASSGGILILGYSMFTTL-----VKGTEG 1017

Query: 863  AREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
            A ++   L + P+I+V DEAH +KN  +   QA    +   RIA+TGSPL NN+M+YY M
Sbjct: 1018 AGKL---LLETPNIVVGDEAHYMKNPGSQRHQATANFRTMSRIAMTGSPLTNNVMDYYAM 1074

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
            +++V   +L    EFR R+ NPI+ G + +S     +   +  H+L   +   V R D+ 
Sbjct: 1075 INWVAPNYLADIAEFRERYSNPIKEGLYADSEPSKKRKARKMLHVLKATVDPKVHRRDIE 1134

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            V+  +LP K  F+IT+ L+  Q+RLY+R+++     N ++   + +   ++    L  + 
Sbjct: 1135 VLLNELPKKKEFIITLPLTKAQKRLYRRYIECVMEPNKQLMTGQAKA--WSLVAKLGLVL 1192

Query: 1043 NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
             HP I +   +     + +A  +++     Y           +   Q   D+    +D  
Sbjct: 1193 AHPIIFKTVAES---QKAEARKATAG---GYKAQSPSSSSTTSATEQDDEDNIELPQDVL 1246

Query: 1103 NDLLHEHTYKEL-DY--SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            + LL     +++ DY  S K+++LL IL  C  +GDK LVFSQSIPTL+ IE        
Sbjct: 1247 SQLLTTVALRDIEDYALSNKILVLLRILDECKKVGDKVLVFSQSIPTLNYIE-------- 1298

Query: 1160 PGKQGKLWKKGKDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
                  ++K+ +  Y RLDG T  S+RQ LV++FN   +   +  LISTRAG +G+N++ 
Sbjct: 1299 -----TIFKRQRVVYQRLDGATPMSKRQDLVKKFN--TDSETRVYLISTRAGGVGLNMYG 1351

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANRV+I D  + P  + QAI RA+R GQTKPV+ Y L   GT E+ I+   V K  LA+R
Sbjct: 1352 ANRVVIFDFRYTPAEEQQAIGRAYRLGQTKPVYVYWLTIGGTFEDTIHNNAVFKTQLASR 1411

Query: 1279 VVDRQ 1283
            VVD++
Sbjct: 1412 VVDKK 1416


>gi|62088670|dbj|BAD92782.1| transcriptional regulator ATRX isoform 1 variant [Homo sapiens]
          Length = 1224

 Score =  323 bits (829), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 163/369 (44%), Positives = 234/369 (63%), Gaps = 11/369 (2%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
             T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCIL
Sbjct: 831  TTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCIL 889

Query: 758  AHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLR 815
            AH MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L 
Sbjct: 890  AHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLE 949

Query: 816  VFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-G 873
            V  L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D G
Sbjct: 950  VSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPG 1009

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
            PD +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS
Sbjct: 1010 PDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGS 1069

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
              EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  
Sbjct: 1070 IKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHE 1129

Query: 994  FVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL- 1050
            +V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL 
Sbjct: 1130 YVLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLD 1189

Query: 1051 ---TKDKGY 1056
                ++KGY
Sbjct: 1190 YISKENKGY 1198


>gi|392343340|ref|XP_003754859.1| PREDICTED: transcriptional regulator ATRX [Rattus norvegicus]
          Length = 2473

 Score =  323 bits (828), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1515 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1573

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+   ++ + L V
Sbjct: 1574 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLNDAEKLEV 1633

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1634 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1693

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  +K +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1694 DFVVCDEGHILKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1753

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1754 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1813

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1814 VLAVRMTAIQCKLYQYYLDHLTGVGNSTDGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1873

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1874 ISKENKGY 1881



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1981 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2040

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2041 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKA 2100

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2101 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2160

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2161 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2199



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 165 CTACGQQVNHFQKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 224

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 225 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICQPEPL 267


>gi|431911996|gb|ELK14139.1| Transcriptional regulator ATRX [Pteropus alecto]
          Length = 2770

 Score =  323 bits (828), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1812 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1870

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1871 HCMGLGKTLQVVSFLHTVLLCEKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1930

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1931 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1990

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1991 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 2050

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 2051 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 2110

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 2111 VLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 2170

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 2171 ISKENKGY 2178



 Score =  224 bits (571), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2278 DWYKDFVTDADAEILEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2337

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2338 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2397

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2398 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2457

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2458 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2496



 Score = 63.9 bits (154), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 481 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 540

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 541 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 588


>gi|212535646|ref|XP_002147979.1| SNF2 family helicase/ATPase, putative [Talaromyces marneffei ATCC
            18224]
 gi|210070378|gb|EEA24468.1| SNF2 family helicase/ATPase, putative [Talaromyces marneffei ATCC
            18224]
          Length = 1784

 Score =  323 bits (828), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 205/602 (34%), Positives = 315/602 (52%), Gaps = 57/602 (9%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT---AMRSV 780
            +K HQ+ GI+FMW  +IQ+       +K  GC+LAHTMGLGKT QVI+ L T   A  S 
Sbjct: 986  VKQHQLAGIQFMWRELIQN-------EKRDGCLLAHTMGLGKTMQVISLLVTIAAAANST 1038

Query: 781  NLGLR----------TALIVTPVNVLHNWKQEFMKWRPSE--LKPLRVFMLEDVSRDRRA 828
            +  +R            LI+ P +++ NW +EF+ W P +  L P+R     D   +RR 
Sbjct: 1039 DPAIRKQVPEFFHRSQTLILCPPSLIDNWYEEFLMWTPKDHALGPIRKVAPSD-PLERRM 1097

Query: 829  ELLAKWRAKGGVFLIGYTAFRNL------SFGKHVKDRNMAREICHALQDGPDILVCDEA 882
              +  W  +GG+ ++ Y  FRN          K   D     ++   L  GP I++ DEA
Sbjct: 1098 ATVESWDTEGGILILSYHLFRNWVAPELKKTSKTAPDLQFPTKLKDQLLKGPRIIIADEA 1157

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN  +   QA   ++ + RIALTGSPL NNL++YY MV+++   +L     F+ ++ 
Sbjct: 1158 HQMKNKNSQLAQAAAMLESRSRIALTGSPLANNLLDYYAMVNWISPKYLDELAVFKAKYL 1217

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
             PIE G   +ST ++ +   ++  +L E L   + R D++V++  LP KT FVITV L+ 
Sbjct: 1218 EPIEQGLFFDSTYQEQRRSLKKLQVLKEILTPKINRADISVLEGSLPSKTEFVITVPLTE 1277

Query: 1003 LQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL--QLTKDKGYPSRE 1060
            +Q+R Y  ++     T+ ++       +F A    L    NHP     +L +     + +
Sbjct: 1278 VQKRAYNHYVT--SLTDGKMGATISSTTFLAWLAVLGLCCNHPACFYNKLAER----ADQ 1331

Query: 1061 DAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKM 1120
            +A   +++E +D +    E P N   F +        QK   +D+      ++  +S + 
Sbjct: 1332 NAPKPTAEELIDPDTFPAEVPLNQLGFNEAMWAS---QKQLLSDV---PDLEDPKHSYRA 1385

Query: 1121 VLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT 1180
             +   I+     +GDK L FSQSIP+L+ +E  L               G  + RLDG+T
Sbjct: 1386 DIFKKIVEESVRVGDKILCFSQSIPSLNYLETLLR------------SSGVRFNRLDGKT 1433

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
                RQ+ V+ FN      +K  LISTRAG LG+N+  ANRVII D S+NPT++ QA+ R
Sbjct: 1434 AVKSRQEAVKDFNN--RDDIKVYLISTRAGGLGLNITGANRVIIFDFSFNPTWEEQAVGR 1491

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            A+R GQ KPV+ YR ++ GT EE ++ + + K  LA RVVD++ V R+ +K    +LF  
Sbjct: 1492 AYRLGQKKPVYIYRFLSGGTYEEVVHNKSIFKTQLAMRVVDKKNVERSATKSLGEYLFPV 1551

Query: 1301 GD 1302
             D
Sbjct: 1552 KD 1553


>gi|119619019|gb|EAW98613.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae), isoform CRA_c [Homo sapiens]
          Length = 2446

 Score =  323 bits (828), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1894 ISKENKGY 1901



 Score =  226 bits (576), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2218



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273


>gi|339240693|ref|XP_003376272.1| putative immunoglobulin domain protein [Trichinella spiralis]
 gi|316975021|gb|EFV58483.1| putative immunoglobulin domain protein [Trichinella spiralis]
          Length = 858

 Score =  323 bits (828), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 198/577 (34%), Positives = 299/577 (51%), Gaps = 90/577 (15%)

Query: 768  QVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR- 826
            +V+AFL+T M+ V+  +   LIVTP+NV+ NW+ E   W         ++ + +V   + 
Sbjct: 113  KVLAFLHTVMKDVDFNVNRVLIVTPINVVLNWRNEISLWLDDHGFDKNIWAMHEVRTTKD 172

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
            R  ++ +W   GG+ +IGY   R L                         L C      K
Sbjct: 173  RYYVIERWENDGGILIIGYELLRYL-------------------------LTCTR----K 203

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
              RA   +A  +                     Y MV+FV+   LG+  EF NRF NPI+
Sbjct: 204  GNRAMIEKAFSKPD-------------------YAMVNFVKPNLLGTRMEFLNRFVNPIK 244

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
            NGQ ++ST  DV +M +R HIL+  L GFV R+D   + + LPPK  +V+ V+LS +QR+
Sbjct: 245  NGQMSDSTLGDVALMKRRVHILHNLLCGFVHRVDYRAISEALPPKFEYVLFVRLSNVQRK 304

Query: 1007 LYKRFLDLHGFTNDRVSNEK----IRKSFFAGYQALAQIWNHPGILQLTKDKG------- 1055
            LY  +L   G   D   N K    ++ + F  YQ L ++ +HP  L + +++        
Sbjct: 305  LYTDYL---GTFYDESRNVKDKSVLQSALFVHYQVLQRVCSHPRELFIMEERAQKKVQLK 361

Query: 1056 -YPSREDAEDSSSDENM--DYNV--------------VIGEKPRN-----MNDFLQGKND 1093
              P    A  +   EN   +Y                +  E+P N       D  +    
Sbjct: 362  RLPVSNGANGNKVMENKLNEYESEQSLSSSLSTNSCELTDEEPANREQSVAKDLPKPIEP 421

Query: 1094 DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFY 1153
                +K+W+   L E     ++ SGKMV+L +I+  C ++GDK L+FSQS+ TLDLIE  
Sbjct: 422  PPVSKKNWYLPTLKEDDPLLVEMSGKMVVLFEIIQRCGDIGDKVLIFSQSLITLDLIEEL 481

Query: 1154 LSKLPR-----PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTR 1208
            L    R       ++   W  G D+ R+DG T +S R++L ++FN+  N+R +  L+ST+
Sbjct: 482  LRLQERNVGESSSREFNYWVPGIDYIRMDGSTNASTRERLAKKFNDETNRRCRVFLLSTK 541

Query: 1209 AGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKR 1268
            AGSLGINL  ANRV++ D +WNP++DLQA++R +R GQ KPV+ YRL+A GTMEE IY+R
Sbjct: 542  AGSLGINLIGANRVVVFDANWNPSHDLQAMFRVYRLGQCKPVYIYRLIAKGTMEETIYQR 601

Query: 1269 QVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            QV K+ L+ RV+D QQ+ R  +  ++ +L+ F  DE+
Sbjct: 602  QVVKQSLSCRVIDEQQIGRHFTFSDLEYLYHFDPDED 638


>gi|426396501|ref|XP_004064478.1| PREDICTED: transcriptional regulator ATRX [Gorilla gorilla gorilla]
          Length = 2433

 Score =  323 bits (827), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1506 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1564

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1565 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1624

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1625 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1684

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1685 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1744

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1745 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1804

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1805 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1864

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1865 ISKENKGY 1872



 Score =  194 bits (493), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 20/209 (9%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE        
Sbjct: 1971 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIE-------- 2022

Query: 1160 PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
                        D+  L  R ++ ++ K +    EP     +  +IST+AGSLGINL +A
Sbjct: 2023 ------------DFLELASREKTEDKDKPLIYKGEPQIFLGRLFIISTKAGSLGINLVAA 2070

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQVTK+ L+ RV
Sbjct: 2071 NRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRV 2130

Query: 1280 VDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2131 VDQQQVERHFTMNELTELYTFEPDLLDDP 2159



 Score = 62.8 bits (151), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278


>gi|397507976|ref|XP_003824451.1| PREDICTED: transcriptional regulator ATRX isoform 2 [Pan paniscus]
          Length = 2454

 Score =  323 bits (827), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1497 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1555

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1556 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1615

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1616 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1675

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1676 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1735

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1736 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1795

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1796 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1855

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1856 ISKENKGY 1863



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1962 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2021

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2022 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2081

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2082 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2141

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2142 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2180



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 13/139 (9%)

Query: 463 LEDHSVSPENINDAATDNSLHSQSLSEK------FYCTACNNVAIE-----VHPHPILNV 511
           L+D +V+ E+ ++  ++N +  QSL ++        CTAC           ++ HP L V
Sbjct: 98  LDDETVN-EDASNENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQV 156

Query: 512 IVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLS 571
           ++CK+C          +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS
Sbjct: 157 LICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELS 216

Query: 572 DEV-QASCWQCCCCSPSLL 589
             + + + W C  C P  L
Sbjct: 217 TIMDENNQWYCYICHPEPL 235


>gi|392355671|ref|XP_003752100.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator ATRX
            [Rattus norvegicus]
          Length = 2542

 Score =  323 bits (827), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1584 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1642

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+   ++ + L V
Sbjct: 1643 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLNDAEKLEV 1702

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1703 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1762

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  +K +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1763 DFVVCDEGHILKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1822

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1823 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1882

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1883 VLAVRMTAIQCKLYQYYLDHLTGVGNSTDGGRXKAGAKLFQDFQMLSRIWTHPWCLQLDY 1942

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1943 ISKENKGY 1950



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2050 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2109

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2110 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKA 2169

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2170 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2229

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2230 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2268



 Score = 63.5 bits (153), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 234 CTACGQQVNHFQKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 293

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 294 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICQPEPL 336


>gi|340959385|gb|EGS20566.1| helicase-like protein [Chaetomium thermophilum var. thermophilum DSM
            1495]
          Length = 2058

 Score =  322 bits (826), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 220/636 (34%), Positives = 333/636 (52%), Gaps = 88/636 (13%)

Query: 702  IVNVVREKGEEA-VRIPSSISAKLKAHQVVGIRFMWENII--QSIRKVKSGDKGLGCILA 758
            IVN  +E  E+A + I   I +K+K HQ+ G+RFMW  ++   S+R+        GC+LA
Sbjct: 854  IVNESKESDEQALIYINDHIGSKIKDHQIEGVRFMWNQVVLNSSVRQ--------GCLLA 905

Query: 759  HTMGLGKTFQVIAFLYTAMRSVN-------------LGLRTALIVTPVNVLHNWKQEFMK 805
            HTMGLGKT QVI  L     S N             L     LI+ P  ++ NW  E   
Sbjct: 906  HTMGLGKTMQVITLLVVIAESANSPDESIRSQIPEDLRESKTLILCPPGLVDNWCDEIKM 965

Query: 806  WRPSE-LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFR-NLSFGKHVKDRNMA 863
            W P++ L P+R  +   +S + R   +  W   GGV ++GY  F   +   +  KD++  
Sbjct: 966  WAPNDILGPVRK-VESRLSVNERQRTVKAWAENGGVLVMGYAMFTLMMDIKEDDKDKDAK 1024

Query: 864  REICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMV 923
            +E+   L+D P+++VCDEAH IKN+ +  +QA    +   RIA+TGSPL NN+ +YY M+
Sbjct: 1025 QEVADLLRDTPNMVVCDEAHYIKNSSSQRSQAASNFRTMSRIAMTGSPLTNNVDDYYAMI 1084

Query: 924  DFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV 983
            ++V   +LG S EF++RF  PI+ G + +S+    +   +   +L + ++  V R D+ V
Sbjct: 1085 NWVAPNYLGDSREFQDRFSIPIKEGLYADSSDAQKRKARKMLQVLKKTVEPKVHRRDIEV 1144

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFLD--LHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
            ++ +LP K  F+IT+ L+ +Q +LY+ +L   +H   +D +    + K+ ++    L+ I
Sbjct: 1145 IRNELPTKKEFIITLPLTAVQMKLYEEYLGWVVHADFSDTMKGNVLAKA-WSLVARLSLI 1203

Query: 1042 WNHPGILQ--LTKDKGYPS-----REDAEDSS--SDENMDYNVVIGEKPRNMNDFLQGKN 1092
              HP + +  L + K   S      E   DSS   DE+ +  +++ E P  +   +  K 
Sbjct: 1204 LAHPFVFKTWLEEQKKKASDKLKQNEKVGDSSRGDDEDEEKALIVPEPPSEVLSNMLAK- 1262

Query: 1093 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEF 1152
                         +     ++ D S K+++LL IL  C  +GDK LVFSQSIPTLD IE 
Sbjct: 1263 -------------VAIRDIEDYDKSNKILVLLRILDECKKVGDKVLVFSQSIPTLDFIEN 1309

Query: 1153 YLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
             +             +K  ++ RLDG T+ S+RQ+ V+RFN   N  V   LISTRAG  
Sbjct: 1310 IMK------------RKKIEFQRLDGSTDRSKRQENVKRFNTDPNSMV--YLISTRAGGE 1355

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+N++ ANRV+I D  + P  + QAI RA+R GQTKPV+ Y L   GT E+ I+   + K
Sbjct: 1356 GLNIYGANRVVIFDFKYTPANEQQAIGRAYRLGQTKPVYVYWLTIGGTFEDIIHNNAIFK 1415

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
              LA RVV                     DD+NPDP
Sbjct: 1416 SQLAQRVV---------------------DDKNPDP 1430


>gi|1778307|gb|AAB49969.1| putative DNA dependent ATPase and helicase [Homo sapiens]
 gi|1778353|gb|AAB40700.1| putative DNA dependent ATPase and helicase [Homo sapiens]
 gi|225356534|gb|AAI56297.1| Alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae) [synthetic construct]
          Length = 2288

 Score =  322 bits (826), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1331 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1389

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1390 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1449

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1450 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1509

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1510 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1569

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1570 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1629

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1630 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1689

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1690 ISKENKGY 1697



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1796 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1855

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1856 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 1915

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 1916 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 1975

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 1976 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2014



 Score = 47.4 bits (111), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 528 KDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSP 586
           +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS  + + + W C  C P
Sbjct: 7   RDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 66

Query: 587 SLL 589
             L
Sbjct: 67  EPL 69


>gi|33354053|dbj|BAC81110.1| ATRX [Homo sapiens]
 gi|133923365|gb|ABO43036.1| alpha thalassemia/mental retardation syndrome X-linked [Homo sapiens]
          Length = 2492

 Score =  322 bits (826), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1894 ISKENKGY 1901



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2218



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273


>gi|20336209|ref|NP_000480.2| transcriptional regulator ATRX isoform 1 [Homo sapiens]
 gi|311033500|sp|P46100.5|ATRX_HUMAN RecName: Full=Transcriptional regulator ATRX; AltName:
            Full=ATP-dependent helicase ATRX; AltName: Full=X-linked
            helicase II; AltName: Full=X-linked nuclear protein;
            Short=XNP; AltName: Full=Znf-HX
 gi|6960326|gb|AAB49970.2| putative DNA dependent ATPase and helicase [Homo sapiens]
 gi|57208647|emb|CAI40710.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae) [Homo sapiens]
 gi|57210059|emb|CAI42674.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae) [Homo sapiens]
 gi|57284090|emb|CAI43115.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae) [Homo sapiens]
 gi|119619017|gb|EAW98611.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae), isoform CRA_a [Homo sapiens]
 gi|119619021|gb|EAW98615.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae), isoform CRA_a [Homo sapiens]
          Length = 2492

 Score =  322 bits (826), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1894 ISKENKGY 1901



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2218



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273


>gi|57113917|ref|NP_001009018.1| transcriptional regulator ATRX [Pan troglodytes]
 gi|38502929|sp|Q7YQM4.1|ATRX_PANTR RecName: Full=Transcriptional regulator ATRX; AltName:
            Full=ATP-dependent helicase ATRX; AltName: Full=X-linked
            helicase II; AltName: Full=X-linked nuclear protein;
            Short=XNP
 gi|33354055|dbj|BAC81111.1| ATRX [Pan troglodytes]
 gi|410261240|gb|JAA18586.1| alpha thalassemia/mental retardation syndrome X-linked [Pan
            troglodytes]
          Length = 2492

 Score =  322 bits (826), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1894 ISKENKGY 1901



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2218



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273


>gi|397507978|ref|XP_003824452.1| PREDICTED: transcriptional regulator ATRX isoform 3 [Pan paniscus]
          Length = 2288

 Score =  322 bits (826), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1331 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1389

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1390 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1449

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1450 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1509

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1510 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1569

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1570 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1629

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1630 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1689

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1690 ISKENKGY 1697



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1796 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1855

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1856 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 1915

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 1916 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 1975

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 1976 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2014



 Score = 47.0 bits (110), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 528 KDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSP 586
           +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS  + + + W C  C P
Sbjct: 7   RDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 66

Query: 587 SLL 589
             L
Sbjct: 67  EPL 69


>gi|397507974|ref|XP_003824450.1| PREDICTED: transcriptional regulator ATRX isoform 1 [Pan paniscus]
          Length = 2492

 Score =  322 bits (826), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1894 ISKENKGY 1901



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2218



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273


>gi|20336205|ref|NP_612114.1| transcriptional regulator ATRX isoform 2 [Homo sapiens]
 gi|6960328|gb|AAB49971.2| putative DNA dependent ATPase and helicase [Homo sapiens]
 gi|57208648|emb|CAB90351.2| alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae) [Homo sapiens]
 gi|57210060|emb|CAI42675.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae) [Homo sapiens]
 gi|57284091|emb|CAI43116.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae) [Homo sapiens]
 gi|119619020|gb|EAW98614.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae), isoform CRA_d [Homo sapiens]
          Length = 2454

 Score =  322 bits (826), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1497 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1555

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1556 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1615

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1616 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1675

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1676 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1735

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1736 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1795

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1796 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1855

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1856 ISKENKGY 1863



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1962 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2021

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2022 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2081

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2082 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2141

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2142 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2180



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 13/139 (9%)

Query: 463 LEDHSVSPENINDAATDNSLHSQSLSEK------FYCTACNNVAIE-----VHPHPILNV 511
           L+D +V+ E+ ++  ++N +  QSL ++        CTAC           ++ HP L V
Sbjct: 98  LDDETVN-EDASNENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQV 156

Query: 512 IVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLS 571
           ++CK+C          +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS
Sbjct: 157 LICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELS 216

Query: 572 DEV-QASCWQCCCCSPSLL 589
             + + + W C  C P  L
Sbjct: 217 TIMDENNQWYCYICHPEPL 235


>gi|410307448|gb|JAA32324.1| alpha thalassemia/mental retardation syndrome X-linked [Pan
            troglodytes]
          Length = 2492

 Score =  322 bits (826), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1894 ISKENKGY 1901



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2218



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273


>gi|410261238|gb|JAA18585.1| alpha thalassemia/mental retardation syndrome X-linked [Pan
            troglodytes]
          Length = 2454

 Score =  322 bits (826), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1497 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1555

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1556 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1615

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1616 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1675

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1676 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1735

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1736 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1795

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1796 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1855

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1856 ISKENKGY 1863



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1962 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2021

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2022 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2081

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2082 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2141

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2142 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2180



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 13/139 (9%)

Query: 463 LEDHSVSPENINDAATDNSLHSQSLSEK------FYCTACNNVAIE-----VHPHPILNV 511
           L+D +V+ E+ ++  ++N +  QSL ++        CTAC           ++ HP L V
Sbjct: 98  LDDETVN-EDASNENSENDITMQSLPKEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLQV 156

Query: 512 IVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLS 571
           ++CK+C          +D+D  +  C WC    +L+ C  C   FC  C+ RN+    LS
Sbjct: 157 LICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELS 216

Query: 572 DEV-QASCWQCCCCSPSLL 589
             + + + W C  C P  L
Sbjct: 217 TIMDENNQWYCYICHPEPL 235


>gi|1778352|gb|AAB40699.1| putative DNA dependent ATPase and helicase [Homo sapiens]
          Length = 2337

 Score =  322 bits (826), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1380 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1438

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1439 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1498

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1499 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1558

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1559 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1618

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1619 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1678

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1679 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1738

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1739 ISKENKGY 1746



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1845 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1904

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1905 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 1964

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 1965 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2024

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2025 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2063



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 16  CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 75

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 76  CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 118


>gi|2306766|gb|AAC51655.1| zinc finger helicase [Homo sapiens]
          Length = 2492

 Score =  322 bits (826), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1894 ISKENKGY 1901



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2218



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273


>gi|410354525|gb|JAA43866.1| alpha thalassemia/mental retardation syndrome X-linked [Pan
            troglodytes]
          Length = 2492

 Score =  322 bits (826), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1894 ISKENKGY 1901



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2218



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273


>gi|1778351|gb|AAB40698.1| putative DNA dependent ATPase and helicase [Homo sapiens]
          Length = 2375

 Score =  322 bits (826), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1418 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1476

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1477 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1536

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1537 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1596

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1597 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1656

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1657 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1716

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1717 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1776

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1777 ISKENKGY 1784



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1883 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1942

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1943 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2002

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2003 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2062

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2063 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2101



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 54  CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 113

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 114 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 156


>gi|2306809|gb|AAC51657.1| X-linked nuclear protein [Homo sapiens]
          Length = 2375

 Score =  322 bits (826), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1418 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1476

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1477 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1536

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1537 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1596

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1597 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1656

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1657 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1716

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1717 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1776

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1777 ISKENKGY 1784



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1883 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1942

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1943 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2002

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2003 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2062

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2063 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2101



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 54  CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 113

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 114 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 156


>gi|38502928|sp|Q7YQM3.1|ATRX_PONPY RecName: Full=Transcriptional regulator ATRX; AltName:
            Full=ATP-dependent helicase ATRX; AltName: Full=X-linked
            helicase II; AltName: Full=X-linked nuclear protein;
            Short=XNP
 gi|33354057|dbj|BAC81112.1| ATRX [Pongo pygmaeus]
          Length = 2492

 Score =  322 bits (826), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1894 ISKENKGY 1901



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2218



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278


>gi|332239701|ref|XP_003269037.1| PREDICTED: transcriptional regulator ATRX [Nomascus leucogenys]
          Length = 2333

 Score =  322 bits (825), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1376 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1434

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1435 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1494

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1495 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1554

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1555 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1614

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1615 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1674

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1675 VLAVRMTSIQCKLYQYYLDHLTGVGNNTEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1734

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1735 ISKENKGY 1742



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1841 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1900

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1901 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 1960

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 1961 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2020

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2021 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2059



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 12  CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 71

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 72  CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 119


>gi|261198491|ref|XP_002625647.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081]
 gi|239594799|gb|EEQ77380.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081]
 gi|239610080|gb|EEQ87067.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3]
          Length = 1776

 Score =  322 bits (825), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 210/608 (34%), Positives = 321/608 (52%), Gaps = 60/608 (9%)

Query: 718  SSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV-IAFLYTA 776
            S I A++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QV I+ L + 
Sbjct: 938  SYIGARVKPHQLSGIQFMWRELIKD-------EKRQGCLLAHTMGLGKTMQVRISLLVSI 990

Query: 777  MRSV-------------NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF-----M 818
              +               L L   L++ P +++ NW +E   W P++    R       +
Sbjct: 991  ANAAASDDPAVRNQIPKELQLSRTLVLCPSSLIENWWEELCIWTPNDPTTSRNIGPFHKI 1050

Query: 819  LEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA------REICHALQD 872
            L  +  + R E ++ W  KGG+ L+ Y  FR L   K  K+R  A       ++   L +
Sbjct: 1051 LPTLQIEERLEGISSWYKKGGILLMSYDIFRALVLNKATKNRPPALDSRAHEKVRKHLLE 1110

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
            GP I+V DEAH +KN  A   +A +    + RIALTGSPL NNL EYY M+D++  G+LG
Sbjct: 1111 GPRIIVADEAHKLKNRNAGVAEACRAFVSKSRIALTGSPLANNLSEYYAMIDWIAPGYLG 1170

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
               +F+ ++  PI+ G + +S+  + +   ++  +L + +   + R D++V+K  LP K 
Sbjct: 1171 DFVQFKAKYIEPIQEGLYADSSQWERRQSLKKLQVLKKDIDPKLNRADISVLKGSLPQKV 1230

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-ILQLT 1051
             FVITV L+PLQ + Y  ++   G   D V N ++    +     L+ + NHPG  ++  
Sbjct: 1231 EFVITVPLTPLQEQAYNAYIAALG-AYDSVGNPRL----WDWLSILSLLCNHPGCFMEKL 1285

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
            +D+   S+   +  SS  + D +  I E P   +  L  +   G  +K +  D+      
Sbjct: 1286 RDR---SKGPQKPPSSRASPDTDSEIPEDPSIPHVLLSSEILSG-LEKIFTTDM----DM 1337

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
              L+ S + ++   I+      GDK L+FS SIPTL+ +E  L             + G+
Sbjct: 1338 WSLELSHRALVADQIIERSIAAGDKVLLFSHSIPTLNYLEQVLR------------QAGR 1385

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
             + RLDG+T  + RQ   + FN   N +V   LISTRAG LG+N+  ANRVII D  +NP
Sbjct: 1386 TYSRLDGKTPVATRQVATKNFNSDSNTQV--YLISTRAGGLGLNIPGANRVIIFDFQFNP 1443

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            T++ QA+ RA+R GQ KPV+ YR +A GT E+ ++ R V K  LA RVVD++   R  SK
Sbjct: 1444 TWEEQAVGRAYRLGQLKPVYVYRFLAGGTYEDIMHNRAVFKTQLAFRVVDKKNPIRWASK 1503

Query: 1292 EEMLHLFE 1299
                +LF+
Sbjct: 1504 NVRDYLFK 1511


>gi|345306711|ref|XP_003428497.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
            [Ornithorhynchus anatinus]
          Length = 2533

 Score =  322 bits (825), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 179/439 (40%), Positives = 268/439 (61%), Gaps = 24/439 (5%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +KKIR+IL D +L  ET+  +  E+ER++R+   + +     +++       ++   +
Sbjct: 1469 KGRKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVI-------EIEDAS 1521

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
             ++      T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+RK K  
Sbjct: 1522 PVKC--PITTKLVLDEDEETKEPLVQVHRNMVTKLKPHQVDGVQFMWDCCCESVRKTKKS 1579

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS 809
              G GCILAH MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+  
Sbjct: 1580 -TGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQDG 1638

Query: 810  --ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
              + + L V  L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +    
Sbjct: 1639 LEDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIF 1698

Query: 867  CHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
              AL D GPD +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F
Sbjct: 1699 NKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNF 1758

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            ++E  LGS  EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + 
Sbjct: 1759 IKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALT 1818

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNE----KIRKSFFAGYQALAQI 1041
            K LPPK  +V+ V+++ +Q +LY+ +LD    T    S+E    K     F  +Q L++I
Sbjct: 1819 KFLPPKHEYVLAVRMTSIQCKLYQYYLD--HLTGVGCSSEGGRGKAGAKLFQDFQMLSRI 1876

Query: 1042 WNHPGILQL----TKDKGY 1056
            W HP  LQL     ++KGY
Sbjct: 1877 WTHPWCLQLDYISKENKGY 1895



 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 111/225 (49%), Positives = 147/225 (65%), Gaps = 12/225 (5%)

Query: 1095 GFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL 1154
            G    DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L
Sbjct: 1990 GSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFL 2049

Query: 1155 SKLPRPGK-----------QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1203
                R              +GK W +  D+YRLDG T +  R+K  E FN+  N R +  
Sbjct: 2050 ELASREKSDDTDKPLIYKGEGK-WFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLF 2108

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            +IST+AGSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQ KPV+ YR +A GTME+
Sbjct: 2109 IISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVYVYRFLAQGTMED 2168

Query: 1264 KIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            KIY RQVTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2169 KIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2213



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 183 CTACGQQVNHFQKDSIYRHPTLKVLICKNCYKYYMSDDISRDSDGMDEQCRWCAEGGNLI 242

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 243 CCDFCHNAFCKKCILRNLGRKELSAIMDENNQWYCYICHPEPL 285


>gi|349605360|gb|AEQ00628.1| Transcriptional regulator ATRX-like protein, partial [Equus caballus]
          Length = 650

 Score =  322 bits (825), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 189/454 (41%), Positives = 273/454 (60%), Gaps = 25/454 (5%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +KKIR+IL D +L  ET+  +   K ++ER K +  +   + KL   + ++       
Sbjct: 197  KGRKKIRKILKDDKLRTETQNAL---KGQEERRKRIAEREREREKLREVIEIEDASPTKC 253

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
             I       T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K  
Sbjct: 254  PI------TTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS 307

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS 809
              G GCILAH MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+  
Sbjct: 308  -PGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEG 366

Query: 810  --ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
              + + L V  L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +    
Sbjct: 367  LKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIF 426

Query: 867  CHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
              AL D GPD +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F
Sbjct: 427  NKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNF 486

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            ++E  LGS  EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + 
Sbjct: 487  IKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALT 546

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWN 1043
            K LPPK  +V+ V+++P+Q +LY+ +LD L G  N       K     F  +Q L++IW 
Sbjct: 547  KFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWT 606

Query: 1044 HPGILQL----TKDKGYPSREDAED----SSSDE 1069
            HP  LQL     ++KGY   ED+ D    S SDE
Sbjct: 607  HPWCLQLDYISKENKGYFD-EDSMDEFIASDSDE 639


>gi|406866079|gb|EKD19119.1| SNF2 family helicase/ATPase [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1]
          Length = 1976

 Score =  322 bits (824), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 224/715 (31%), Positives = 364/715 (50%), Gaps = 83/715 (11%)

Query: 616  NSDADNNLKIGGKRKQKKKIRRILDDA---ELGEETKRKIAIEKERQERLKSLQVQFSSK 672
            N+  D++++       K+K + IL+DA    L E  + ++A ++ R++ LK+   Q+ S 
Sbjct: 1172 NTTTDDDVQAEDSLPLKRK-KTILEDAGARSLRERNRERLAEQERRRQTLKAKLAQYGSS 1230

Query: 673  SKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGI 732
                                 L   +  Y +N    +G++ + +       +K HQ+ G+
Sbjct: 1231 ---------------------LDRGVEFYQINDAAAEGQKPIFVHEDFRRCIKPHQMNGV 1269

Query: 733  RFMWENIIQSIRKVKSGDKGL-GCILAHTMGLGKTFQVIAFLYTAMRSV----------- 780
            RFMW  I+ +      G++ + GC+LAHTMGLGKT Q I  L     +            
Sbjct: 1270 RFMWNQIVTT-----DGEENMQGCLLAHTMGLGKTMQTICLLVAIAEAAASPDESISSQI 1324

Query: 781  --NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKG 838
              +L    ALI+ P  ++ NW  E + W P ++    ++ L       R + +++W   G
Sbjct: 1325 PDSLKQTKALILCPAGLIDNWMDELLGWTPPDILG-NLWKLNSFDISERLDAISEWHEAG 1383

Query: 839  GVFLIGYTAFRNL---SFGKHVKDRNMARE---ICHALQDGPDILVCDEAHMIKNTRADT 892
            GV L  Y  FRN+   S GK    R    E   +   L +GP+I++ DEAH +KNT +  
Sbjct: 1384 GVLLCSYDGFRNMLTNSAGKKQGARLTQEEHMRVQDQLLNGPNIVIADEAHKMKNTSSKL 1443

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
            T+   Q +   RIALTGSPL NN+ EYY M++++   +LGS  EF  +++NPIE G    
Sbjct: 1444 TKVATQFRTLSRIALTGSPLANNVGEYYAMINWIVHNYLGSLKEFDRKYKNPIEAGLFVE 1503

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ST  + +   ++   L E+L+  V R  M V+K +LPPK  FV+T+ L+ +QR++Y  ++
Sbjct: 1504 STQPERRTCLKKLKQLNEELRLKVDRAGMQVLKNELPPKVEFVLTLPLTDIQRKVYSMYI 1563

Query: 1013 D-LHGFTNDRVSNEKIRKSFFAGYQA-LAQIWNHPGIL--QLTKDKGYP--SREDAEDSS 1066
            + L+   N    + +++ +    + A L+ + NHP     ++ + KG P   ++  E SS
Sbjct: 1564 ETLNASRNQLTKDGEVKTTTLWSWIATLSLLCNHPYCFSTKIQERKGAPESDKDRGELSS 1623

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL---DYSGKMVLL 1123
            +    D +         + D +     D    + + N+++     ++L   + S K  +L
Sbjct: 1624 ARAPNDQDDT------TVADVVNVPLADTGLSQSFVNEVMELFNSEDLHSVELSYKASIL 1677

Query: 1124 LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
              IL     +GDK+L+FS SIPTL+ +E    +L R         +G+ + RLDG+T   
Sbjct: 1678 CQILDCAKAVGDKTLIFSSSIPTLNFLE----QLCR--------TQGRPYKRLDGKTNIL 1725

Query: 1184 ERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1243
            +RQ   + FN+ ++   +  LIST AG LG+NL SANRV+I D  +NP  + QA+ RA+R
Sbjct: 1726 KRQAQTKEFNKGVD---EVYLISTTAGGLGLNLQSANRVVIFDFKFNPIQEEQAVGRAYR 1782

Query: 1244 YGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ--VHRTISKEEMLH 1296
             GQ KP F YR +  GT E+ I+ + + K  LA+RVVD++   V    S  E LH
Sbjct: 1783 IGQLKPTFVYRFVCGGTFEDNIHNKTIFKAQLASRVVDKKSPLVAARKSLGEFLH 1837


>gi|395754146|ref|XP_002831879.2| PREDICTED: transcriptional regulator ATRX [Pongo abelii]
          Length = 2455

 Score =  322 bits (824), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 1498 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1556

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V
Sbjct: 1557 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1616

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1617 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1676

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1677 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1736

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1737 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1796

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL  
Sbjct: 1797 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1856

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1857 ISKENKGY 1864



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1963 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2022

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2023 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2082

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2083 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2142

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2143 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2181



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278


>gi|154091016|ref|NP_033556.2| transcriptional regulator ATRX [Mus musculus]
 gi|341940583|sp|Q61687.3|ATRX_MOUSE RecName: Full=Transcriptional regulator ATRX; AltName:
            Full=ATP-dependent helicase ATRX; AltName: Full=HP1
            alpha-interacting protein; AltName: Full=HP1-BP38
            protein; AltName: Full=Heterochromatin protein 2;
            AltName: Full=X-linked nuclear protein
          Length = 2476

 Score =  321 bits (823), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 233/368 (63%), Gaps = 11/368 (2%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+ K K    G GCILA
Sbjct: 1520 TKLVLDENEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVEKTKKS-PGSGCILA 1578

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+   ++ + L V
Sbjct: 1579 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLNDNEKLEV 1638

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 1639 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKDIFNKALVDPGP 1698

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  +K +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 1699 DFVVCDEGHILKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1758

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 1759 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1818

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 1819 VLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1878

Query: 1051 --TKDKGY 1056
               ++KGY
Sbjct: 1879 ISKENKGY 1886



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1983 DWYKDFVTDTDAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2042

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2043 EKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKA 2102

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2103 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2162

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2163 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2201



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 229

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICQPEPL 272


>gi|330800474|ref|XP_003288261.1| hypothetical protein DICPUDRAFT_97966 [Dictyostelium purpureum]
 gi|325081717|gb|EGC35223.1| hypothetical protein DICPUDRAFT_97966 [Dictyostelium purpureum]
          Length = 1718

 Score =  318 bits (816), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 206/594 (34%), Positives = 313/594 (52%), Gaps = 67/594 (11%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G++ + I   I   LK HQ+ G++F+W+N++          KG GCILAH+MGLGKT QV
Sbjct: 1052 GKKDIFIDPQIGCFLKEHQIKGVQFLWDNLVF---------KGKGCILAHSMGLGKTLQV 1102

Query: 770  IAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE----LKPLRVFMLEDVSRD 825
            I FLYT     + G +  LIV P N L NW++EF KW PS        L+VF   + +  
Sbjct: 1103 ITFLYTH-NQYHKGSKYLLIV-PANTLCNWEREFKKWLPSNNAKSKNSLKVFAPHNHNMR 1160

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMI 885
             R  ++  W   GGV  + + +F ++      K R   ++I   L+   D ++ DE H +
Sbjct: 1161 DRCNVIRNWYKNGGVLSLTFESFSSMV----SKYREEYQDIGLVLK--TDFMIVDEGHRL 1214

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            K+T+         V+  ++  LTG PLQNNL EYY M+D++R   LG+  EF+ RF  PI
Sbjct: 1215 KSTKTKLFDCANLVETPKKALLTGYPLQNNLFEYYVMIDYIRNLHLGNEREFKERFVKPI 1274

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP-PKTVFVITVKLSPLQ 1004
              G  +++T  ++K MN R   L++ +K FVQR+   V+ K++   K   +I VK + +Q
Sbjct: 1275 SAGSKSDATEYEIKQMNYRMAALHDLIKDFVQRLGPEVLDKEVNVSKKEKMILVKRTEIQ 1334

Query: 1005 RRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP-GILQLTKDKGYPSREDAE 1063
             RL    L++   ++  V +       FA ++ L  +  HP G+L+    K   S +D E
Sbjct: 1335 TRL----LEISINSSTSVDH-------FAQFEVLTVVCAHPDGLLE----KKPLSNKDLE 1379

Query: 1064 DSSSDENMDYNVVIGEKPR--------------NMNDFLQGKNDDGFFQKDWWNDLLHEH 1109
                +E +   + + + P               ++N+           Q + +    +  
Sbjct: 1380 KKPINE-LKQILKVNDVPTTDIILKSELVQRVISLNEIKSA----NIHQPNVFTSYFNSI 1434

Query: 1110 TYKE--LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
             Y+   L+ S K +L   +L   +  G+K + FS SI TL+ +E++L K          W
Sbjct: 1435 GYRRGILERSNKFLLFFSMLKNFTENGEKVVAFSFSISTLNQLEYFLQK-------NLNW 1487

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
            K   D++RLDG+T S  RQ+++ RFNE  N  +K  +IST+AGSLG NL    RVII+D 
Sbjct: 1488 KPNIDYFRLDGQTPSKVRQRMINRFNEEDN-HLKLFIISTKAGSLGTNLTGGTRVIILDL 1546

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            SWNP +D QA+YR +R GQ K V+ Y L+  GT EE+IY R + K+ LA R VD
Sbjct: 1547 SWNPVHDRQAVYRCYRIGQKKTVYVYTLVMAGTGEERIYNRMIHKQALAKRAVD 1600


>gi|121712770|ref|XP_001273996.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1]
 gi|119402149|gb|EAW12570.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1]
          Length = 1818

 Score =  318 bits (816), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 230/735 (31%), Positives = 355/735 (48%), Gaps = 111/735 (15%)

Query: 598  RAMGSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKE 657
            R   S N   +SS    ++ D   +      +K+KKK+    D     E  +R++A +++
Sbjct: 906  RKQPSGNKPSTSSNQFGDSEDEQLSRPDAPHKKRKKKVEESQDAKRTQERAQRRVARQEQ 965

Query: 658  RQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIP 717
             ++RL+          + M S+ +     A  ++                  GE  + + 
Sbjct: 966  ERKRLE----------RKMESMGVSNTDPARQAVSF----------------GEPIIYLD 999

Query: 718  SSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM 777
            S I  ++K HQ+ GI+F+W  +I         +K  GC+LAHTMGLGKT QVI+ L T  
Sbjct: 1000 SHIGRRIKPHQLNGIQFLWRELIHD-------EKQQGCLLAHTMGLGKTMQVISLLTTIS 1052

Query: 778  -------RSVNLGLRT------ALIVTPVNVLHNWKQEFMKWRP--SELKPLRVFMLEDV 822
                    S++  + T       LI+ P +++ NW +EF+ W P  S + PLR       
Sbjct: 1053 AAASSHDPSISQQVPTCFHRSQTLILCPSSLIENWYEEFLMWTPEGSSIGPLRKVTAAST 1112

Query: 823  SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE------ICHALQDGPDI 876
              +R  E+ + W  +GG+ ++ Y  FR          R    +      +   L +GP+I
Sbjct: 1113 VSERFREV-SDWDEEGGILIMSYDIFRTWVLNAETSKRAKPLQDEEHVKVKEWLLEGPNI 1171

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            +V DEAH +KN  +   +A  Q + + RIALTGSPL NNL++YY MV+++ EG+LG   +
Sbjct: 1172 IVADEAHKMKNPSSGICRAAMQFRSKSRIALTGSPLANNLVDYYTMVNWIAEGYLGEFLD 1231

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  +  PIE+G + +ST  + +   ++  +L E L   V R D+ V++  LPPK  FVI
Sbjct: 1232 FKANYVEPIEDGLYVDSTYYERRKSLKKLQVLKEILDPKVNRADITVLEGSLPPKVEFVI 1291

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA---LAQIWNHPGILQLTKD 1053
            T+ L+PLQ+  Y  ++                KS   G +A    A++W+   IL L  +
Sbjct: 1292 TIPLTPLQQSAYDSYV----------------KSVVQGRRAEVGTAKLWSWMAILGLCCN 1335

Query: 1054 KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND--LLHEHT- 1110
                 RE     +++       +I               D+   Q D  +   L+ E   
Sbjct: 1336 HPACFREKLLSKANESQKSKAQMI-------------PGDEAITQLDLSDSERLVSEQEE 1382

Query: 1111 -------YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                    K L+ S +  LL  I+T   N GDK L+FS  IPTL+ IE  L         
Sbjct: 1383 LFAAVPDIKALNLSYRAQLLDRIVTESINAGDKVLIFSHRIPTLNYIEHILK-------- 1434

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
                   + + RLDG+T    RQ   +RFN    ++V   LISTRAG LG+N+  ANRV+
Sbjct: 1435 ----AANRSYCRLDGKTPIFSRQASTKRFNTGSEEQV--YLISTRAGGLGLNIPGANRVV 1488

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            I D S++P ++ QA+ RA+R GQ KPV+ YR ++ GT EE +Y + V K  LA RVVD++
Sbjct: 1489 IFDFSFSPVWEEQAVGRAYRLGQQKPVYVYRFISGGTFEEIMYNKAVFKTQLAFRVVDKK 1548

Query: 1284 QVHRTISKEEMLHLF 1298
               R  SK+   +LF
Sbjct: 1549 NPVRWASKKLNEYLF 1563


>gi|380798987|gb|AFE71369.1| transcriptional regulator ATRX isoform 2, partial [Macaca mulatta]
          Length = 1036

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 170/376 (45%), Positives = 239/376 (63%), Gaps = 16/376 (4%)

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILAH MGLGKT 
Sbjct: 88   ETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILAHCMGLGKTL 146

Query: 768  QVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRVFMLEDVSRD 825
            QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L V  L  V R 
Sbjct: 147  QVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRP 206

Query: 826  R-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAH 883
            + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GPD +VCDE H
Sbjct: 207  QERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGH 266

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
            ++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS  EFRNRF N
Sbjct: 267  ILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFIN 326

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            PI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +V+ V+++P+
Sbjct: 327  PIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPI 386

Query: 1004 QRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL----TKDKGYP 1057
            Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL     ++KGY 
Sbjct: 387  QCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGY- 445

Query: 1058 SREDAED----SSSDE 1069
              ED+ D    S SDE
Sbjct: 446  FDEDSMDEFIASDSDE 461



 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 544  DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 603

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 604  EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 663

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 664  GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 723

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 724  VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 762


>gi|242793636|ref|XP_002482204.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC
            10500]
 gi|218718792|gb|EED18212.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC
            10500]
          Length = 1788

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 211/610 (34%), Positives = 314/610 (51%), Gaps = 65/610 (10%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT---A 776
            I  ++K HQ+ GI+FMW  +IQ+       +K  GC+LAHTMGLGKT QVI+ L T   A
Sbjct: 976  IGGRVKPHQLAGIQFMWRELIQN-------EKRDGCLLAHTMGLGKTMQVISLLVTIAAA 1028

Query: 777  MRSVNLGLR----------TALIVTPVNVLHNWKQEFMKWRPS---ELKPLRVFMLEDVS 823
              S +  +R            L++ P +++ NW +EF  W P    +L  +R     D  
Sbjct: 1029 ANSPDPAIRKQVPEFFHRSQTLVLCPPSLIDNWYEEFNMWAPRGDHKLGQIRKVAQSD-P 1087

Query: 824  RDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA------LQDGPDIL 877
             ++R   + +W  +GGV ++ Y  FRN    +  K  N   E+         L  GP I+
Sbjct: 1088 LEQRMSTIEEWDTEGGVLILSYHLFRNWVAPELKKSTNTNTEMQFPTRLKDQLLKGPRII 1147

Query: 878  VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEF 937
            V DEAH +KN  +   +A   ++ + RIALTGSPL NNLM+YY MV+++   +L     F
Sbjct: 1148 VADEAHQMKNKSSQLARAAAMLESRSRIALTGSPLANNLMDYYAMVNWISPKYLDELAVF 1207

Query: 938  RNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 997
            R ++  PIE G  ++ST ++ +   ++  +L + L   + R D++V++  LP KT FVIT
Sbjct: 1208 RAKYLEPIEQGLFSDSTYQEQRRSLKKLQVLKQILTPKIHRADISVLEGSLPSKTEFVIT 1267

Query: 998  VKLSPLQRRLYKRFLD--LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            V ++ +Q+R Y  ++   + G     VS+     +F      L    NHP        K 
Sbjct: 1268 VPMTEVQKRTYNHYVTSLMEGKNAIAVSS----ATFLTWMAVLGLCCNHPACFYDKVAKR 1323

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
              + E A   +++E +D      E P          +  GF +  W +         +LD
Sbjct: 1324 --AEEHAPKPANEEPIDPETFPAEVPL---------SSLGFNEAMWASQKQLLSDVPDLD 1372

Query: 1116 ---YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
               +S +  +   I+     + +K L FSQSIPTLD    YL +L        L   G  
Sbjct: 1373 DPKHSHRADIFKKIVEESVRLEEKILCFSQSIPTLD----YLERL--------LRSSGVR 1420

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            +YRLDG T    RQK V+ FN+     +   LISTRAG LG+N+  ANRVII D S+NPT
Sbjct: 1421 FYRLDGSTAVKNRQKDVKSFNQ---GEISVYLISTRAGGLGLNITGANRVIIFDFSFNPT 1477

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 1292
            ++ QA+ RA+R GQ KPV+ YR +A GT EE ++ + + K  LA RVVD++ V R+ +K 
Sbjct: 1478 WEEQAVGRAYRLGQEKPVYVYRFLAGGTYEEVVHNKSIFKTQLAMRVVDKKNVERSATKS 1537

Query: 1293 EMLHLFEFGD 1302
               +LF   D
Sbjct: 1538 LGEYLFPVKD 1547


>gi|238494328|ref|XP_002378400.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357]
 gi|220695050|gb|EED51393.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357]
          Length = 1663

 Score =  318 bits (815), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 217/621 (34%), Positives = 313/621 (50%), Gaps = 77/621 (12%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G  A+ +   I  ++K HQ+ GI+FMW  +I+   K        GC+LAHTMGLGKT QV
Sbjct: 842  GNPAIYLDPQIGLRVKPHQLNGIQFMWRELIEDENK-------QGCLLAHTMGLGKTMQV 894

Query: 770  IAFLYT---AMRSVNLGLRT----------ALIVTPVNVLHNWKQEFMKWRP--SELKPL 814
            I+ L T   A  S +  +R           +LI+ P +++ NW +EF+ W P  S + PL
Sbjct: 895  ISLLATISAAASSDDPKIRQQVPAAFYRSQSLILCPSSLIENWYEEFLMWAPVQSGIGPL 954

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSF-------GKHVKDRNMAREIC 867
            R         +R  E+   W  +GGV ++ Y  FR           GK + D +  + + 
Sbjct: 955  RKITTSATMPERLQEV-CDWNEEGGVLIMSYDIFRTWILNRETNKRGKPLNDNDYGK-VR 1012

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
              L +GP+I+V DEAH +KN     +QA  Q + + RIALTGSPL NNL++YY M++++ 
Sbjct: 1013 DCLLEGPNIIVADEAHKMKNPATGISQAAMQFRSKSRIALTGSPLANNLIDYYAMINWIA 1072

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
            EG+LG   EF+ +F  PI  G + +ST  + +    +  +L E L   + R D++V+   
Sbjct: 1073 EGYLGEFVEFKAKFVEPITEGLYVDSTYTERRRSLVKLQVLKEILAPKINRADISVLAGS 1132

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLD--LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
            LP K  FVITV L+ LQ++ Y  +++  L G            K  F      AQ+W+  
Sbjct: 1133 LPTKVEFVITVPLTDLQKQAYDSYVETILQG------------KGAFGS----AQLWSWL 1176

Query: 1046 GILQLT-------KDKGYPSREDAEDSSSDENMD-YNVVIGEKPRNMNDFLQGKNDDGFF 1097
             IL L        +DK      DA+    ++ +D   ++ G++P        G  D    
Sbjct: 1177 AILSLCCNHPSCFRDKLLSRANDAQ--KINKRLDEMEMIPGDEPIAQ----AGLPDSEKL 1230

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
              +           K L+ S +  ++  I+      GDK LVFS SIPTLD IE  L   
Sbjct: 1231 VSEQEQIFAKVPDIKALEMSHRARIMNSIIDESIRAGDKILVFSHSIPTLDYIEHVLR-- 1288

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
                         + + RLDGRT    RQ   +RFN  L    +  LISTRAG LG+N+ 
Sbjct: 1289 ----------SSNRKYSRLDGRTPVVTRQDATKRFN--LGSEKQVYLISTRAGGLGLNIP 1336

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRVII D  ++P ++ QA+ RA+R GQ KPVF YR +A GT EE +Y + V K  LA 
Sbjct: 1337 GANRVIIFDFKFSPVWEEQAVGRAYRLGQQKPVFVYRFIAGGTFEEVMYNKAVFKTQLAF 1396

Query: 1278 RVVDRQQVHRTISKEEMLHLF 1298
            RVVD++   R   K    +LF
Sbjct: 1397 RVVDKKNPVRWAQKSLGEYLF 1417


>gi|317149017|ref|XP_001823066.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40]
          Length = 1364

 Score =  318 bits (814), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 217/621 (34%), Positives = 313/621 (50%), Gaps = 77/621 (12%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G  A+ +   I  ++K HQ+ GI+FMW  +I+   K        GC+LAHTMGLGKT QV
Sbjct: 543  GNPAIYLDPQIGLRVKPHQLNGIQFMWRELIEDENK-------QGCLLAHTMGLGKTMQV 595

Query: 770  IAFLYT---AMRSVNLGLRT----------ALIVTPVNVLHNWKQEFMKWRP--SELKPL 814
            I+ L T   A  S +  +R           +LI+ P +++ NW +EF+ W P  S + PL
Sbjct: 596  ISLLATISAAASSDDPKIRQQVPAAFYRSQSLILCPSSLIENWYEEFLMWAPVQSGIGPL 655

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSF-------GKHVKDRNMAREIC 867
            R         +R  E+   W  +GGV ++ Y  FR           GK + D +  + + 
Sbjct: 656  RKITTSATMPERLQEV-CDWNEEGGVLIMSYDIFRTWILNRETNKRGKPLNDNDYGK-VR 713

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
              L +GP+I+V DEAH +KN     +QA  Q + + RIALTGSPL NNL++YY M++++ 
Sbjct: 714  DCLLEGPNIIVADEAHKMKNPATGISQAAMQFRSKSRIALTGSPLANNLIDYYAMINWIA 773

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
            EG+LG   EF+ +F  PI  G + +ST  + +    +  +L E L   + R D++V+   
Sbjct: 774  EGYLGEFVEFKAKFVEPITEGLYVDSTYTERRRSLVKLQVLKEILAPKINRADISVLAGS 833

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLD--LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
            LP K  FVITV L+ LQ++ Y  +++  L G            K  F      AQ+W+  
Sbjct: 834  LPTKVEFVITVPLTDLQKQAYDSYVETILQG------------KGAFGS----AQLWSWL 877

Query: 1046 GILQLT-------KDKGYPSREDAEDSSSDENMD-YNVVIGEKPRNMNDFLQGKNDDGFF 1097
             IL L        +DK      DA+    ++ +D   ++ G++P        G  D    
Sbjct: 878  AILSLCCNHPSCFRDKLLSRANDAQ--KINKRLDEMEMIPGDEPIAQ----AGLPDSEKL 931

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
              +           K L+ S +  ++  I+      GDK LVFS SIPTLD IE  L   
Sbjct: 932  VSEQEQIFAKVPDIKALEMSHRARIMNSIIDESIRAGDKILVFSHSIPTLDYIEHVLR-- 989

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
                         + + RLDGRT    RQ   +RFN  L    +  LISTRAG LG+N+ 
Sbjct: 990  ----------SSNRKYSRLDGRTPVVTRQDATKRFN--LGSEKQVYLISTRAGGLGLNIP 1037

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRVII D  ++P ++ QA+ RA+R GQ KPVF YR +A GT EE +Y + V K  LA 
Sbjct: 1038 VANRVIIFDFKFSPVWEEQAVGRAYRLGQQKPVFVYRFIAGGTFEEVMYNKAVFKTQLAF 1097

Query: 1278 RVVDRQQVHRTISKEEMLHLF 1298
            RVVD++   R   K    +LF
Sbjct: 1098 RVVDKKNPVRWAQKSLGEYLF 1118


>gi|156393888|ref|XP_001636559.1| predicted protein [Nematostella vectensis]
 gi|156223663|gb|EDO44496.1| predicted protein [Nematostella vectensis]
          Length = 814

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 170/434 (39%), Positives = 255/434 (58%), Gaps = 35/434 (8%)

Query: 628  KRKQKKKIRRILDDAELGEETKR----KIAIEKERQERLKSLQVQFSSKSKLMNSVTLDG 683
            K K ++KIR++L D +LGEETK+    +    +   ER ++L     S    ++S+ L+ 
Sbjct: 28   KSKGRRKIRKLLTDEKLGEETKKARRLEEERRQRLLERTQNLSEDMPSMDWKVDSLVLES 87

Query: 684  DLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSI 743
            D                       E  E  V +   I   LK HQ  G++FM++ +++S+
Sbjct: 88   D----------------------PETKEPIVEVNKHIVKYLKPHQCKGVQFMYDCLVESV 125

Query: 744  RKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEF 803
            +  K G+ G GCILAH MGLGKT QV+  ++T   +  L   TAL+V P+N L NW+ EF
Sbjct: 126  KAYKKGEPGSGCILAHCMGLGKTLQVVTLVHTLFNNKELEFTTALVVAPLNTLLNWQVEF 185

Query: 804  MKWRPSELKP----LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV 857
             KW     KP     +V++L++V  +  RRA++L +W+  GG+ ++GY  +RNLS   +V
Sbjct: 186  EKWLSHLSKPPFPIFQVYVLQEVGHNSWRRADMLTQWQRYGGIMIMGYDMYRNLSLCNNV 245

Query: 858  KDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNL 916
            + + + +     L D GPDI++CDE H++KN  +  ++AL  +K +RR+ LTG+PLQNNL
Sbjct: 246  RSKKVKKIFKETLVDPGPDIVICDEGHILKNDASAISRALNAIKTRRRVVLTGTPLQNNL 305

Query: 917  MEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV 976
            +EY+CMV FV+   LG+  EF N F NPI+NGQ  +ST  D +IM QR H+L++ L+G V
Sbjct: 306  IEYHCMVSFVKPSLLGTRKEFMNTFGNPIQNGQCADSTPSDFRIMKQRCHVLFKMLEGCV 365

Query: 977  QRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQ 1036
            QR D +V+   LP K  +VI V+LS  QR+LY+ +L    F    V+   +    F+ YQ
Sbjct: 366  QRRDYSVLTPFLPAKHEYVIKVRLSEAQRKLYEHYLKTFVFPEGDVTKRGV--GLFSDYQ 423

Query: 1037 ALAQIWNHPGILQL 1050
            AL +IW HP  L+L
Sbjct: 424  ALMRIWTHPWCLKL 437



 Score =  186 bits (471), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/244 (41%), Positives = 148/244 (60%), Gaps = 20/244 (8%)

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
            ++ SGK+VLLL+IL     + +K LVFSQS+ +LDLIE  L      G   + W KG D+
Sbjct: 547  VELSGKLVLLLEILADAEAVEEKVLVFSQSLVSLDLIERALGG-GEVGGDRENWCKGCDY 605

Query: 1174 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
            +R+DG T    RQ+  + FN+P NK  +  LIST+AG LGINL +ANRVI+ D SWNP++
Sbjct: 606  FRMDGSTSVQLRQRWADIFNDPDNKTARLFLISTKAGGLGINLVAANRVIVFDASWNPSH 665

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEE 1293
            D+Q+I+R +R+GQTK V+ YR ++ GTMEE++Y RQV K  ++ RVVD+ Q+ R  +  +
Sbjct: 666  DVQSIFRVYRFGQTKAVYVYRFLSQGTMEERVYDRQVAKLSISERVVDKHQIERHFTAAD 725

Query: 1294 MLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMESLLGKHHP 1353
            +  L++F    +PD L     +    S           LPL      D ++  L+ + HP
Sbjct: 726  LAELYKF----DPDVLDETKNKEDIPS-----------LPLP----KDAILADLINRMHP 766

Query: 1354 RCAV 1357
            +  V
Sbjct: 767  QWIV 770


>gi|346327248|gb|EGX96844.1| SNF2 family helicase/ATPase, putative [Cordyceps militaris CM01]
          Length = 1674

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 209/608 (34%), Positives = 311/608 (51%), Gaps = 87/608 (14%)

Query: 701  YIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII--QSIRKVKSGDKGLGCILA 758
            +I+N  + + +  + +   IS ++K HQ+ G+RF+W +I+  QS R+        GC+LA
Sbjct: 750  FIINESKREDQGFIYVHREISLRIKDHQIEGVRFLWNHIVREQSERQ--------GCLLA 801

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLG------------LR--TALIVTPVNVLHNWKQEFM 804
            HTMGLGKT Q I FL  A+R   L             LR    L++ P  ++ NWK EF+
Sbjct: 802  HTMGLGKTMQTITFL-VALRQSALSDDPTIRDQIPQDLRDWKVLVLCPSGLVENWKDEFL 860

Query: 805  KWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAR 864
             W P  L      +    S  +R +    W ++GGV + GY  F++  F K + D     
Sbjct: 861  IWAPQHLMKNITTIEAYQSSPQRIDNAKYWASEGGVLITGYNMFKS-GFRKGLDDDQTID 919

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
             I   L +   +++ DEAH +KN RA  TQ   ++K   RIALTGSPL NN+ EYY M++
Sbjct: 920  RI---LVENATVVIADEAHTLKNPRAKVTQVASELKTSTRIALTGSPLANNVEEYYAMIN 976

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM-NV 983
            +V   FLG   EFR+ +  PI  G + +ST+ + +   +   +L       V R  + + 
Sbjct: 977  WVAPNFLGPLQEFRDMYAAPIHQGLYHDSTTAEKRRAIKLLQVLKTTAAPKVHRATIKSC 1036

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
            +K +LPPK  FVI+V  + +QR+LY  ++    ++ D++     + S F     LA I  
Sbjct: 1037 LKDELPPKEEFVISVPPTQMQRQLYDLYMQAAHYSGDKLD----QASLFGVLNHLALICA 1092

Query: 1044 HPG-----ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKP-RNMNDFLQGKNDDGFF 1097
            HP      ++ L    G                 +   + + P   +   ++  ND    
Sbjct: 1093 HPAAYRRTVIDLRTKAG-----------------FGKAVAKFPMETIPQIMKITND---- 1131

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
                  DL         ++S K+ LL  IL   S +GDK LVFSQSIPTL+    YL KL
Sbjct: 1132 -----MDL------NRTEFSNKVELLNKILNQSSRLGDKVLVFSQSIPTLN----YLDKL 1176

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
                       +G+ + RLDG T  ++RQ +V+RFN   +   +  LIST AG +G+N++
Sbjct: 1177 --------FQHQGRRFCRLDGSTLVAKRQDMVKRFNTGSD---EVYLISTNAGGVGLNIY 1225

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRV+I D  WNP  D QAI RA+R GQTKPVF YR +  G+ E+ +  + V K  LA+
Sbjct: 1226 GANRVVIFDFKWNPVQDQQAIGRAYRIGQTKPVFVYRFVVAGSFEDDLQNKAVFKMQLAS 1285

Query: 1278 RVVDRQQV 1285
            RVVD++ V
Sbjct: 1286 RVVDQKNV 1293


>gi|71277007|gb|AAZ29723.1| ATRY [Macropus eugenii]
          Length = 1771

 Score =  317 bits (812), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 184/466 (39%), Positives = 275/466 (59%), Gaps = 31/466 (6%)

Query: 603  ENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERL 662
            ENL    +++ SEN ++          + +KKI+ ILD+ +L  ET++ +  E+ R++R+
Sbjct: 758  ENLSTEHNKNLSENDES------KSPEQSRKKIKNILDNDKLQRETQKALKEEERRRKRI 811

Query: 663  KSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAIT-GYIVNVVREKGEEAVRIPSSIS 721
               Q +   + KL   V      S+ +  E     IT   +++   E  E  V+I  ++ 
Sbjct: 812  AEKQQE---REKLREVVD-----SSASPTEC---PITIKLVLDEDEETKEPLVQIHRNLV 860

Query: 722  AKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVN 781
             KLK HQ+ G++FMW+   +S+ + K    G GCILAH MGLGKT QV+ FL+T +    
Sbjct: 861  TKLKPHQIDGVQFMWDCCCESVIQTKKS-AGSGCILAHCMGLGKTLQVVTFLHTVLLCDK 919

Query: 782  LGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPLRVFMLEDVSRDR-RAELLAKWRAKG 838
            L   TAL+V P+N   NW  EF KW+    + K L+V  L  + R + R++LL KW+  G
Sbjct: 920  LNFTTALVVCPLNTALNWINEFEKWQEVLEDDKKLKVSELGTMKRAQDRSDLLQKWQDNG 979

Query: 839  GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALK 897
            GV +IGY  +RNL  G++VK R         L D GPD +VCDE H++KN  +  ++A+ 
Sbjct: 980  GVMVIGYEMYRNLVQGRNVKSRKFKEIFNKTLIDPGPDFVVCDEGHILKNEASAVSKAMN 1039

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS  EFRNRF NPI+NGQ  +S+  D
Sbjct: 1040 SIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSSMAD 1099

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
            V+IM +R+HIL E L G VQR D   + K LPPK  +V+ V+++ +Q +LY+ +LD H  
Sbjct: 1100 VRIMKKRAHILCEMLAGCVQRKDHTTLTKILPPKYEYVLAVRMTSVQCKLYQYYLD-HLP 1158

Query: 1018 TNDRVS---NEKIRKSFFAGYQALAQIWNHPGILQL----TKDKGY 1056
              + ++     K     F  +  L++IW HP  LQL     ++KGY
Sbjct: 1159 VAESITEGGRGKAGAKLFQDFNILSRIWTHPWCLQLDYISKENKGY 1204



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 108/214 (50%), Positives = 145/214 (67%), Gaps = 10/214 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL----- 1154
            DW+ D + +   K L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L     
Sbjct: 1299 DWYKDFITDSDAKVLEHSGKMVLLFEILKMAEELGDKVLVFSQSLISLDLIEDFLELGSN 1358

Query: 1155 -----SKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
                    PR  K    W +  D+YRLDG + +  R+K  E FN+  N R +  LIST+A
Sbjct: 1359 EISDDKDKPRIYKGEGKWFRNIDYYRLDGSSSAQSRKKWAEEFNDETNVRGRLFLISTKA 1418

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVI+ D SWNP+YD+Q+I+R +R+GQ+KPVF YR +A GTME+KIY+RQ
Sbjct: 1419 GSLGINLVAANRVIVFDASWNPSYDIQSIFRVYRFGQSKPVFVYRFLAQGTMEDKIYERQ 1478

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            VTK+ L+ RV+D+QQV R  +  E+  L+ F  D
Sbjct: 1479 VTKQSLSFRVIDQQQVERHFTLNELTELYAFEPD 1512



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 7/128 (5%)

Query: 469 SPENINDAATDNSL-HSQSLSEKFYCTACNNVAIE-----VHPHPILNVIVCKDCKCLLE 522
           S E+++    D +L   + L     CTAC     +     ++ HP LNV++CK+C     
Sbjct: 71  SSESVSSFPGDQALLFGEELRRNVICTACGQQVNQFQKDSIYRHPTLNVLICKNCYKYYM 130

Query: 523 KKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQC 581
                +D++  +  C WC    +L+ C SC   FC  C+ RN+    +S  + + + W C
Sbjct: 131 SDDISRDSEGIDEQCRWCAEGGNLICCDSCHNAFCKKCIWRNLGRKEISKIMNEKNEWHC 190

Query: 582 CCCSPSLL 589
             C P  L
Sbjct: 191 YICCPEPL 198


>gi|74183379|dbj|BAE36571.1| unnamed protein product [Mus musculus]
          Length = 916

 Score =  317 bits (812), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 171/385 (44%), Positives = 241/385 (62%), Gaps = 16/385 (4%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+ K K    G GCILA
Sbjct: 186  TKLVLDENEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVEKTKKS-PGSGCILA 244

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+   ++ + L V
Sbjct: 245  HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLNDNEKLEV 304

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 305  SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKDIFNKALVDPGP 364

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  +K +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 365  DFVVCDEGHILKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 424

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 425  KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 484

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 485  VLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 544

Query: 1051 --TKDKGYPSREDAED----SSSDE 1069
               ++KGY   ED+ D    S SDE
Sbjct: 545  ISKENKGYFD-EDSMDEFIASDSDE 568



 Score =  223 bits (567), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 649  DWYKDFVTDTDAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 708

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 709  EKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKA 768

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 769  GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 828

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 829  VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 867


>gi|74137169|dbj|BAE21982.1| unnamed protein product [Mus musculus]
          Length = 995

 Score =  317 bits (811), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 171/385 (44%), Positives = 241/385 (62%), Gaps = 16/385 (4%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S+ K K    G GCILA
Sbjct: 312  TKLVLDENEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVEKTKKS-PGSGCILA 370

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPLRV 816
            H MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+   ++ + L V
Sbjct: 371  HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLNDNEKLEV 430

Query: 817  FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
              L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D GP
Sbjct: 431  SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKDIFNKALVDPGP 490

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D +VCDE H++KN  +  ++A+  +K +RRI LTG+PLQNNL+EY+CMV+F++E  LGS 
Sbjct: 491  DFVVCDEGHILKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 550

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  +
Sbjct: 551  KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 610

Query: 995  VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 1050
            V+ V+++ +Q +LY+ +LD L G  N       K     F  +Q L++IW HP  LQL  
Sbjct: 611  VLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 670

Query: 1051 --TKDKGYPSREDAED----SSSDE 1069
               ++KGY   ED+ D    S SDE
Sbjct: 671  ISKENKGYFD-EDSMDEFIASDSDE 694



 Score =  223 bits (567), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 775  DWYKDFVTDTDAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 834

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 835  EKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKA 894

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 895  GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 954

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 955  VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 993


>gi|391871480|gb|EIT80640.1| transcription regulator XNP/ATRX, DEAD-box superfamily [Aspergillus
            oryzae 3.042]
          Length = 1006

 Score =  317 bits (811), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 216/620 (34%), Positives = 312/620 (50%), Gaps = 75/620 (12%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G  A+ +   I  ++K HQ+ GI+FMW  +I+   K        GC+LAHTMGLGKT QV
Sbjct: 325  GNPAIYLDPQIGLRVKPHQLNGIQFMWRELIEDENK-------QGCLLAHTMGLGKTMQV 377

Query: 770  IAFLYT---AMRSVNLGLRT----------ALIVTPVNVLHNWKQEFMKWRP--SELKPL 814
            I+ L T   A  S +  +R           +LI+ P +++ NW +EF+ W P  S + PL
Sbjct: 378  ISLLATISAAASSDDPKIRQQVPAAFYRSQSLILCPSSLIENWYEEFLMWAPVQSGIGPL 437

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSF-------GKHVKDRNMAREIC 867
            R         +R  E+   W  +GGV ++ Y  FR           GK + D +  + + 
Sbjct: 438  RKITTSATMPERLQEV-CDWNEEGGVLIMSYDIFRTWILNRETNKRGKPLNDNDYGK-VR 495

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
              L +GP+I+V DEAH +KN     +QA  Q + + RIALTGSPL NNL++YY M++++ 
Sbjct: 496  DCLLEGPNIIVADEAHKMKNPATGISQAAMQFRSKSRIALTGSPLANNLIDYYAMINWIA 555

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
            EG+LG   EF+ +F  PI  G + +ST  + +    +  +L E L   + R D++V+   
Sbjct: 556  EGYLGEFVEFKAKFVEPITEGLYVDSTYTERRRSLVKLQVLKEILAPKINRADISVLAGS 615

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLD--LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
            LP K  FVITV L+ LQ++ Y  +++  L G            K  F      AQ+W+  
Sbjct: 616  LPTKVEFVITVPLTDLQKQAYDSYVETILQG------------KGAFGS----AQLWSWL 659

Query: 1046 GILQLT-------KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
             IL L        +DK      DA+  +   + +  ++ G++P        G  D     
Sbjct: 660  AILSLCCNHPSCFRDKLLSRANDAQKINKRLD-EMEMIPGDEPIAQ----AGLPDSEKLV 714

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
             +           K L+ S +  ++  I+      GDK LVFS SIPTLD IE  L    
Sbjct: 715  SEQEQIFAKVPDIKALEMSHRARIMNSIIDESIRAGDKILVFSHSIPTLDYIEHVLR--- 771

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
                        + + RLDGRT    RQ   +RFN  L    +  LISTRAG LG+N+  
Sbjct: 772  ---------SSNRKYSRLDGRTPVVTRQDATKRFN--LGSEKQVYLISTRAGGLGLNIPG 820

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANRVII D  ++P ++ QA+ RA+R GQ KPVF YR +A GT EE +Y + V K  LA R
Sbjct: 821  ANRVIIFDFKFSPVWEEQAVGRAYRLGQQKPVFVYRFIAGGTFEEVMYNKAVFKTQLAFR 880

Query: 1279 VVDRQQVHRTISKEEMLHLF 1298
            VVD++   R   K    +LF
Sbjct: 881  VVDKKNPVRWAQKSLGEYLF 900


>gi|390358525|ref|XP_003729279.1| PREDICTED: uncharacterized protein LOC578567 [Strongylocentrotus
            purpuratus]
          Length = 2379

 Score =  316 bits (810), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 176/468 (37%), Positives = 268/468 (57%), Gaps = 35/468 (7%)

Query: 606  IVSSSESDSENSDADNNLKIGG----------KRKQKKKIRRILDDAELGEET------- 648
            + SSS+S+S+  +     K G            +K +K+IRR++  ++L  ET       
Sbjct: 1328 VASSSDSESKTQEDSQEEKTGSDDSSGDENDTPKKGRKQIRRVIKKSKLKAETLAAEMEE 1387

Query: 649  --KRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVV 706
              +R+   EK +Q  +  +        +++N+       SA          +   I+   
Sbjct: 1388 QERRRRIEEKXKQVNMVEIVGLMRRYKRIINAEEEKAKKSA---------VVKTCILEKA 1438

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            ++  E  + +   I   LK HQ  GIRF++++  +S+ K  +G KG GCILAH MGLGKT
Sbjct: 1439 KDSDEVVLEVDERIVKHLKPHQAEGIRFIFDSTFESVSK--AGAKGGGCILAHCMGLGKT 1496

Query: 767  FQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD- 825
             QVI++L+T M + +L ++T L+V P+N + NW+ EF KW       + ++ +  V  + 
Sbjct: 1497 LQVISYLHTIMTNPDLKVKTCLVVAPLNTVLNWEDEFEKWIGHMDSGINIYEMSAVKNNA 1556

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREICHALQDGPDILVCDEAHM 884
             RA+ L  W  KGGV ++GY  +RNL+   H+ K +  A  +   ++ GPDI+VCDE HM
Sbjct: 1557 SRADYLDHWHKKGGVMILGYAMYRNLALLTHIRKKKEKAIFLKTLVEPGPDIVVCDEGHM 1616

Query: 885  IKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNP 944
            +KN  +  ++A+  +   RRI LTG+PLQNNL+EY+CMV FV+   LG+  EF+NRF NP
Sbjct: 1617 LKNESSAISKAMNNITTLRRICLTGTPLQNNLIEYHCMVHFVKPNLLGTMREFKNRFVNP 1676

Query: 945  IENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQ 1004
            I NGQH++ST+ DVKIM +R+H+L+  L G VQR D   + K LPPK  FVI V+LS +Q
Sbjct: 1677 ITNGQHSDSTARDVKIMKRRAHVLHNLLSGCVQRKDYMALTKFLPPKHEFVINVRLSEVQ 1736

Query: 1005 RRLYKRFLD-LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
             +LY  +L+ + G  +D    +    S F+ YQAL  +W HP +LQL 
Sbjct: 1737 IKLYDHYLNTMSGRKDDGTKTQCT--SLFSDYQALMNVWTHPRLLQLA 1782



 Score =  198 bits (503), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/223 (43%), Positives = 142/223 (63%), Gaps = 15/223 (6%)

Query: 1101 WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
            W++D   E    +++ SGK+VLL +IL M  ++G+K LVFSQS+ +LD+IE  L+ L   
Sbjct: 1917 WYSDFFSEDDSFKIELSGKLVLLFEILKMAESVGEKVLVFSQSLLSLDMIEDMLAHLDEK 1976

Query: 1161 GKQGKL---------------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
             ++ +                W KG+D++R+DG + +  R++  E FN+  N R +  LI
Sbjct: 1977 AQEERANGEQDLENQIGGTGSWIKGEDYFRMDGSSAAHLRRRWSEIFNDLDNIRSRLFLI 2036

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            STRAGSLG NL +ANRVII D +WNP++D+Q+I+R +R+GQ + VF YR +A GTMEEKI
Sbjct: 2037 STRAGSLGTNLIAANRVIIFDANWNPSHDIQSIFRVYRFGQERAVFIYRFIAQGTMEEKI 2096

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            Y RQV K+ L+ RVVD  Q+ R  +  ++  L+ F  D   DP
Sbjct: 2097 YDRQVIKQSLSQRVVDEHQIERHFTSADLSELYNFFPDRLDDP 2139



 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 11/115 (9%)

Query: 489 EKFYCTACNNVAIEVHP--------HPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWC 540
           E   CTAC N   +++P        HP+LNV+ CK C          +D D  E  C WC
Sbjct: 288 ESVICTACCN---QINPFEKNAFFGHPVLNVVFCKACLDFYSSGPWKQDRDGIEEECRWC 344

Query: 541 GRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQASCWQCCCCSPSLLKRLTSE 595
           G+   L  C  C   FC  C+ RN+  A  +  +    W+C  C P+ LK L ++
Sbjct: 345 GQGGSLSCCDYCCKTFCKRCIMRNLGRAEWNRTLSKKKWKCYVCDPAPLKELVAK 399


>gi|83771803|dbj|BAE61933.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 939

 Score =  316 bits (809), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 216/620 (34%), Positives = 312/620 (50%), Gaps = 75/620 (12%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G  A+ +   I  ++K HQ+ GI+FMW  +I+   K        GC+LAHTMGLGKT QV
Sbjct: 275  GNPAIYLDPQIGLRVKPHQLNGIQFMWRELIEDENK-------QGCLLAHTMGLGKTMQV 327

Query: 770  IAFLYT---AMRSVNLGLRT----------ALIVTPVNVLHNWKQEFMKWRP--SELKPL 814
            I+ L T   A  S +  +R           +LI+ P +++ NW +EF+ W P  S + PL
Sbjct: 328  ISLLATISAAASSDDPKIRQQVPAAFYRSQSLILCPSSLIENWYEEFLMWAPVQSGIGPL 387

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSF-------GKHVKDRNMAREIC 867
            R         +R  E+   W  +GGV ++ Y  FR           GK + D +  + + 
Sbjct: 388  RKITTSATMPERLQEV-CDWNEEGGVLIMSYDIFRTWILNRETNKRGKPLNDNDYGK-VR 445

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
              L +GP+I+V DEAH +KN     +QA  Q + + RIALTGSPL NNL++YY M++++ 
Sbjct: 446  DCLLEGPNIIVADEAHKMKNPATGISQAAMQFRSKSRIALTGSPLANNLIDYYAMINWIA 505

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
            EG+LG   EF+ +F  PI  G + +ST  + +    +  +L E L   + R D++V+   
Sbjct: 506  EGYLGEFVEFKAKFVEPITEGLYVDSTYTERRRSLVKLQVLKEILAPKINRADISVLAGS 565

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLD--LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
            LP K  FVITV L+ LQ++ Y  +++  L G            K  F      AQ+W+  
Sbjct: 566  LPTKVEFVITVPLTDLQKQAYDSYVETILQG------------KGAFGS----AQLWSWL 609

Query: 1046 GILQLT-------KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
             IL L        +DK      DA+  +   + +  ++ G++P        G  D     
Sbjct: 610  AILSLCCNHPSCFRDKLLSRANDAQKINKRLD-EMEMIPGDEPIAQ----AGLPDSEKLV 664

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
             +           K L+ S +  ++  I+      GDK LVFS SIPTLD IE  L    
Sbjct: 665  SEQEQIFAKVPDIKALEMSHRARIMNSIIDESIRAGDKILVFSHSIPTLDYIEHVLR--- 721

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
                        + + RLDGRT    RQ   +RFN  L    +  LISTRAG LG+N+  
Sbjct: 722  ---------SSNRKYSRLDGRTPVVTRQDATKRFN--LGSEKQVYLISTRAGGLGLNIPV 770

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANRVII D  ++P ++ QA+ RA+R GQ KPVF YR +A GT EE +Y + V K  LA R
Sbjct: 771  ANRVIIFDFKFSPVWEEQAVGRAYRLGQQKPVFVYRFIAGGTFEEVMYNKAVFKTQLAFR 830

Query: 1279 VVDRQQVHRTISKEEMLHLF 1298
            VVD++   R   K    +LF
Sbjct: 831  VVDKKNPVRWAQKSLGEYLF 850


>gi|115438126|ref|XP_001217986.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114188801|gb|EAU30501.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 1735

 Score =  315 bits (808), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 210/636 (33%), Positives = 322/636 (50%), Gaps = 70/636 (11%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G+  + +   I   +K HQ+ GIRFMW  ++         +K  GC+LAHTMGLGKT QV
Sbjct: 935  GDPVIYLDPQIGKYVKQHQLEGIRFMWRELMD--------EKQQGCLLAHTMGLGKTMQV 986

Query: 770  IAFLYT---AMRSVNLGLR----------TALIVTPVNVLHNWKQEFMKWRP--SELKPL 814
            I+ L T   A  S +  +R           +LI+ P +++ NW +EF+ W P  + +  +
Sbjct: 987  ISLLATISAAASSTDPNIRKQIPKAFHRSQSLILCPSSLIDNWYEEFLMWTPESASIGTI 1046

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSF------GKHVKDRNMAREICH 868
            R      +S   R + ++ W  KGGV ++ Y  FR+         G+   D    +++  
Sbjct: 1047 RRITTA-LSVAERIQEVSDWHTKGGVLILSYNIFRSWVLNNETAKGRKPLDDARHKQVTE 1105

Query: 869  ALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
             L  GP+I+V DEAH +KN +++   A  + + + RIALTGSPL NNL +YY MVD++ E
Sbjct: 1106 WLLQGPNIIVADEAHKLKNPKSNVAIAAMKFRSRSRIALTGSPLTNNLTDYYTMVDWISE 1165

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
            G+L    EF   +  PI+ G +  ST  + +    +  +L + L   + R D+ V+  +L
Sbjct: 1166 GYLPPFTEFNANYIEPIQEGLYLESTYREKRTSLVKLQVLNKLLSPKINRADITVLAGEL 1225

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLD--LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG 1046
            PPK  FV+TV L+ LQ+  Y  + +  L G   D V    +  + ++    L    NHP 
Sbjct: 1226 PPKVEFVLTVPLTSLQQSAYDSYAEATLRGVGGDSV----VATTLWSWLAVLQLCCNHPS 1281

Query: 1047 -ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDL 1105
              L+  + +   ++  AE +  DE ++   +      N +  +         QK  ++  
Sbjct: 1282 CFLEKLEGRASKTKPGAEAAPGDELINRAGIA-----NADQLVAD-------QKRLFD-- 1327

Query: 1106 LHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK 1165
              E   K    S + +LL  I+      GDK LVFS ++PTLD IE  L           
Sbjct: 1328 -AEPDVKAPKLSYRALLLDKIIDKSVRAGDKVLVFSHTLPTLDYIEHVLQ---------- 1376

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
              +  + + RLDG+T    RQ   ++FN   N  ++  LISTRAG LG+N+  ANRVII 
Sbjct: 1377 --QSNRKYCRLDGKTPVVSRQAATKKFNTDAN--LEVYLISTRAGGLGLNIPGANRVIIY 1432

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D S++P ++ QAI RA+R GQ KPV+ YR ++ GT EE +Y + + K  LA RVVD++  
Sbjct: 1433 DFSFSPFWEEQAIGRAYRLGQVKPVYVYRFISGGTFEEVMYNKALFKTQLAHRVVDKKNP 1492

Query: 1286 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSS 1321
             R   K     LF       P P+T V++  G+  S
Sbjct: 1493 IRLALKSLREWLFP----SKPVPVTDVTEFLGKDPS 1524


>gi|367050528|ref|XP_003655643.1| hypothetical protein THITE_2119562, partial [Thielavia terrestris
            NRRL 8126]
 gi|347002907|gb|AEO69307.1| hypothetical protein THITE_2119562, partial [Thielavia terrestris
            NRRL 8126]
          Length = 1798

 Score =  315 bits (808), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 208/604 (34%), Positives = 309/604 (51%), Gaps = 67/604 (11%)

Query: 702  IVNVVREKGEEA-VRIPSSISAKLKAHQVVGIRFMWENII--QSIRKVKSGDKGLGCILA 758
            IVNV +E  E+  + I   I   +K HQ+ G+RFMW  ++   S+R+        GC+LA
Sbjct: 840  IVNVTKESDEQGLIYINDHIGRSIKDHQIQGVRFMWNQVVVDSSVRQ--------GCLLA 891

Query: 759  HTMGLGKTFQVIAFLYTAMRS-----------VNLGLRTA--LIVTPVNVLHNWKQEFMK 805
            H+MGLGKT QVI  L     S           +   LR +  LI+ P +++ NW +E   
Sbjct: 892  HSMGLGKTMQVITLLVVIAESSSSPDESVRSQIPESLRQSQTLILCPASLVDNWVEEISI 951

Query: 806  WRPSE-LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAR 864
            W P   L P+   M   +S + R   L  W + GGV +IGYT F  L             
Sbjct: 952  WAPGGVLGPVHK-MDASLSSEGRTLTLQHWASAGGVLIIGYTMFTTLIRSDE-------- 1002

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
            E    L + P++++ DEAH +KN  +   QA    K   RIA+TGSPL NN+M+YY M++
Sbjct: 1003 ETAKLLLETPNLVIGDEAHYMKNPESQRHQATANFKTMSRIAMTGSPLTNNVMDYYAMIN 1062

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            +V   +L    EFR RF NPI+ G + +S     +   +  H+L   +   V R D+ V+
Sbjct: 1063 WVAPNYLADIAEFRERFSNPIKEGLYADSEPHQKRKARRMLHVLKATVDPKVHRRDIQVL 1122

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
              +LP K  F+IT+ L+ LQ RLY+ +++ +   + + ++ +    S  A    L  +  
Sbjct: 1123 YDELPRKKEFIITLPLTKLQMRLYQTYIEWVTNLSGEAITGQARAWSLVA---KLGLVLA 1179

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP I +   +        ++   S          G++     +  Q    D  F+     
Sbjct: 1180 HPAIFKTVAEAQKAKTGGSKAQLSKAAKAAKAEEGDEGETGVEMPQ----DVLFR----- 1230

Query: 1104 DLLHEHTYKEL-DY--SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
             LL +   +E+ DY  S K+++LL IL  C  +GDK LVFSQSIPTLD +E         
Sbjct: 1231 -LLGDVAVREIEDYALSNKILVLLRILEECKKVGDKVLVFSQSIPTLDYVE--------- 1280

Query: 1161 GKQGKLWKKGKDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
                 ++++ +  Y RLDG T  + RQ  V++FN   N   +  LISTRAG +G+N+H A
Sbjct: 1281 ----NIFQRQRVVYQRLDGNTPVTVRQDSVKKFN--TNAASQVYLISTRAGGVGLNIHGA 1334

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NRV+I D  + P  + QAI RA+R GQTKPV+ Y L   GT E+ I+   + K  LA+RV
Sbjct: 1335 NRVVIFDFKYTPADEQQAIGRAYRLGQTKPVYVYWLTIGGTFEDTIHNNAIFKTQLASRV 1394

Query: 1280 VDRQ 1283
            VD++
Sbjct: 1395 VDKK 1398


>gi|67523599|ref|XP_659859.1| hypothetical protein AN2255.2 [Aspergillus nidulans FGSC A4]
 gi|40744672|gb|EAA63828.1| hypothetical protein AN2255.2 [Aspergillus nidulans FGSC A4]
 gi|259487648|tpe|CBF86478.1| TPA: SNF2 family helicase/ATPase, putative (AFU_orthologue;
            AFUA_5G06600) [Aspergillus nidulans FGSC A4]
          Length = 1832

 Score =  315 bits (808), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 208/617 (33%), Positives = 320/617 (51%), Gaps = 58/617 (9%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  V +   I  ++K HQ+ GI+FMW  +++     KS +   GC+LAHTMGLGKT QVI
Sbjct: 926  EPIVYLHPHIGQRVKLHQLSGIQFMWRELVED----KSQE---GCLLAHTMGLGKTMQVI 978

Query: 771  AFLYTAMRSVNL-----------GLRT--------ALIVTPVNVLHNWKQEFMKWRPSE- 810
            + L T   + N            G R          L++ P +++ NW+ EF+ W P + 
Sbjct: 979  SLLVTITAAANSPDPRIQQQVPEGFRPRNDLPEARTLVICPSSLIENWRDEFVMWTPQDV 1038

Query: 811  LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA------R 864
            L  +R    ED    R AE+ + W  KGGV LI +  FRN    +    ++        +
Sbjct: 1039 LLTVRQVSSEDNMDVRLAEV-SMWYEKGGVLLISFDIFRNWVLNQATAKKSPPLSDSKHQ 1097

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
            ++ H L +GP I++ DEAH +KN  + T+QA  Q + + RIALTGSPL NNL +YY MV+
Sbjct: 1098 DLKHWLLEGPSIIIADEAHKMKNPDSATSQAAMQFRSKSRIALTGSPLANNLGDYYTMVN 1157

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            ++   +LGS  EF+  +  PI+ G + +ST  + +    +  +L + L+  + R D+  +
Sbjct: 1158 WISYDYLGSFLEFKANYIEPIKEGLYADSTYGEKRKSLMKLQVLKQILEPKINRADITAL 1217

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            + DLPPK  FV+TV L+ +Q+  Y  +     F      +E  +   ++    L    NH
Sbjct: 1218 EGDLPPKVEFVLTVPLTKIQKEAYDMYA---AFILQGRMDEVTQTQLWSWLSILGLCCNH 1274

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMND-FLQ--GKNDDGFFQKDW 1101
            P   Q   DK     + +   ++D     +V     P  + D F++  G  +      + 
Sbjct: 1275 PACFQ---DKLVSQAQGSSKKTNDTRKTSDVDQAISPDRLGDGFIENAGIRNLEELVAEQ 1331

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG 1161
                 + H  K ++ S + V+   I+      GDK LVFSQS+ TLD    YL +L    
Sbjct: 1332 LRIFANVHDLKAVELSVRAVITKRIIDESIRAGDKVLVFSQSLHTLD----YLERL---- 1383

Query: 1162 KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                L    + + RLDG+T ++ RQ   ++FN+      +  LISTRAG LG+N+  ANR
Sbjct: 1384 ----LKVTNRQYSRLDGQTPAATRQAATKKFNQ---GEKQVYLISTRAGGLGLNITGANR 1436

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            VII D S++P ++ QAI RA+R GQ KPVF YR +A GT +E I+++   K  LA RVVD
Sbjct: 1437 VIIFDFSFSPIWEEQAIGRAYRLGQQKPVFVYRFIAGGTFQEIIHEKATYKTQLAVRVVD 1496

Query: 1282 RQQVHRTISKEEMLHLF 1298
            ++   R+  K+   ++F
Sbjct: 1497 KRNPIRSAHKKPGDYIF 1513


>gi|147817208|emb|CAN70867.1| hypothetical protein VITISV_027610 [Vitis vinifera]
          Length = 1177

 Score =  315 bits (806), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 156/186 (83%), Positives = 163/186 (87%), Gaps = 5/186 (2%)

Query: 1174 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
            YRLDGRTE SERQKLVERFN+PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY
Sbjct: 980  YRLDGRTEGSERQKLVERFNDPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1039

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEE 1293
            DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEE
Sbjct: 1040 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEE 1099

Query: 1294 MLHLFEFGDDENPDPLTAVSKENGQGSSQNTNC----ALKHKLPLSHEGC-SDKLMESLL 1348
            MLHLF+FGDDENPD L    KE    ++QN       +LK KL LSH  C SDKLMESLL
Sbjct: 1100 MLHLFDFGDDENPDILPERGKEEEHTTNQNMTGQVGNSLKDKLSLSHGSCSSDKLMESLL 1159

Query: 1349 GKHHPR 1354
             +H+PR
Sbjct: 1160 VRHYPR 1165


>gi|440639603|gb|ELR09522.1| hypothetical protein GMDG_00704 [Geomyces destructans 20631-21]
          Length = 1149

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 213/630 (33%), Positives = 327/630 (51%), Gaps = 72/630 (11%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            I+N  + + E  + +   I +++K HQ+ G+RFMW  I      V  G    GC+LAHTM
Sbjct: 135  IINESKFEQEGFIFVHDHIGSRIKNHQIDGVRFMWSQI------VSKGGASQGCLLAHTM 188

Query: 762  GLGKTFQVIAFLYTAMRSV-------------NLGLRTALIVTPVNVLHNWKQEFMKWRP 808
            GLGKT QVI  L     +               L     LI++P  ++ NW  E + W P
Sbjct: 189  GLGKTMQVITLLVAIAEAACSEDSSVSSQIPEKLKRSRTLILSPPGLMDNWMDELLTWVP 248

Query: 809  SELKPLRVFMLEDVSRDRRAE-LLAK---WRAKGGVFLIGYTAFRN-LSFG-----KHVK 858
             +    ++     V  + + E  LA+   W   GG+ L+G+  FRN L+ G     K + 
Sbjct: 249  EKDVGPKIGRFRKVDSNMKIEQRLAEIDLWYKNGGILLLGFEMFRNMLNMGPKEDKKPII 308

Query: 859  DRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLME 918
            D+     +   L  GP+I++ DEAH ++NT +  T A  + K + RIALTGSPL NN+ E
Sbjct: 309  DQATFEVVEEQLLKGPNIIIADEAHKLRNTNSALTIAATRFKSKSRIALTGSPLSNNVEE 368

Query: 919  YYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQR 978
            Y+ M++++   +LG   EFR +F  PI+ G + NST  + +   +   +L E +   V R
Sbjct: 369  YHSMIEWIAPNYLGPIGEFRAKFVEPIQEGLYGNSTIAERRRALKMLEVLKEDISPKVNR 428

Query: 979  MDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF--------LDLHGFTNDRVSNEKIRK- 1029
             D +V+K DL PK  F+ITV L+ LQ + Y  +        LD   FT     + KIR+ 
Sbjct: 429  ADSSVLKNDLKPKIEFIITVPLTDLQHKAYTIYVKAMLESPLDEDQFTE----SGKIRQT 484

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
            + ++    LA + NHP      K+K    R++    +S+ + D ++V+   P +++  L 
Sbjct: 485  TLWSWIGILALLCNHPICF---KNK-LTERKNKARIASNGDADGDIVV---PSDISQALI 537

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
             +  D F          +    +  + S K  +L+ IL     +GDK L+FS +I TLD 
Sbjct: 538  SEVADLFGG--------YGPGTENANNSYKTKILVQILDASREVGDKVLIFSTTIATLDY 589

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            +E  L KL +           +++ RLDG T  ++RQ L + FN       +  LIST A
Sbjct: 590  LE-NLCKLTK-----------RNYGRLDGSTPMTKRQGLTKEFN---TGDTEVYLISTTA 634

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+NL+ ANRVII D  WNP  + QA+ RA+R GQ KPV+ YR +A GT EEK++ + 
Sbjct: 635  GGLGLNLYGANRVIIFDFKWNPINEEQAVGRAYRLGQKKPVYVYRFIAGGTFEEKLHNKA 694

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFE 1299
            V K+ LA+++VD+Q +     +E+   LF+
Sbjct: 695  VFKKQLASQLVDKQHIFAVAKREKGEFLFK 724


>gi|380012066|ref|XP_003690110.1| PREDICTED: transcriptional regulator ATRX homolog [Apis florea]
          Length = 871

 Score =  313 bits (803), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 170/443 (38%), Positives = 257/443 (58%), Gaps = 23/443 (5%)

Query: 629  RKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAG 688
            +K +K IR+++ D ++ ++TK+    E+ER +R+   Q  ++     M  V L G+    
Sbjct: 387  KKGRKNIRKVMKDKQVTDDTKQAAKEEEERLKRIAERQKLYNE----MYEVRLAGE---- 438

Query: 689  ASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKS 748
                   + +   I++   E  EE + +   +  +LK HQ  GI+FMW+   +S+ ++  
Sbjct: 439  -------EKVDKLILDFNPETKEELITVHKDLVKRLKPHQAKGIKFMWDACFESLERINC 491

Query: 749  GDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP 808
               G GCI+AH MGLGK+ QVIA  +T +     G++T +IV P++ + NW  EF  W  
Sbjct: 492  SP-GSGCIIAHCMGLGKSLQVIALAHTLLTHEKSGVKTIMIVCPLSTVLNWLNEFKYWLN 550

Query: 809  SELKPLRVFMLEDVSRD-RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                 + ++ +  + ++  R   L  W+  GG+ LIGY  FRNL+   +   +NM  EI 
Sbjct: 551  DIENDIEIYEMTKLKKNIERKIQLESWQRTGGILLIGYEMFRNLTGTNNRMRKNMKEEIL 610

Query: 868  HALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              L D GPD++VCDE H++KN     ++++K+++  RRI LTG+PLQNNL+EY+CMV FV
Sbjct: 611  RYLIDPGPDMIVCDEGHLLKNEDTALSKSIKRIRTLRRIVLTGTPLQNNLIEYHCMVQFV 670

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
            +   LG+  EF NRF NPI NGQ  +ST  DVKIM +R+++L++ LKG VQR D +V+  
Sbjct: 671  KPNLLGTKREFLNRFANPITNGQFDDSTEYDVKIMKKRAYVLHKMLKGCVQRFDYSVLTP 730

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG 1046
             LPPK  +VI V L+ +Q  +YK +LD   F   R+ N     S FA +QAL +IW HP 
Sbjct: 731  FLPPKQEYVIFVSLTEVQINMYKYYLD--NFAR-RIRN--ANGSLFADFQALQRIWTHPI 785

Query: 1047 ILQLTKDKGYPSREDAEDSSSDE 1069
            +LQL  +K     E   DSS  E
Sbjct: 786  VLQLNAEKIEKMNERKLDSSDSE 808


>gi|353232075|emb|CCD79430.1| putative transcriptional regulator atrx homolog (X-linked nuclear
            protein-1) [Schistosoma mansoni]
          Length = 2142

 Score =  313 bits (802), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 176/448 (39%), Positives = 252/448 (56%), Gaps = 42/448 (9%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +KKIR+I     L E TK   A E+ER+ RL   Q       K+ N   +        
Sbjct: 1055 KGRKKIRKIFTANRLSETTKAAEACEQERRRRLAERQ-------KMYNEFIVQD------ 1101

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSI-----R 744
                 G+ I      +  + G+  + +   I   LK HQV  +RF+W+  I+S+     +
Sbjct: 1102 -----GEGINAVTTKLTLDPGDPVIEVHPDIVKYLKPHQVEAVRFLWDCTIESVEHQTSQ 1156

Query: 745  KVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV-NLGLRTALIVTPVNVLHNWKQEF 803
               S   G G ILAH MGLGKT  VI+FL+T +R   ++ +RT LI+ PVN L NWK E+
Sbjct: 1157 GEPSPSTGSGAILAHCMGLGKTLSVISFLHTLLRYPEHVHIRTCLIICPVNTLLNWKHEW 1216

Query: 804  MKWRPSELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRN--LSFGKHVKDR 860
              W P E +P+ VF L   + +R + +++  W   GGV LIGY  FRN  ++  K  + +
Sbjct: 1217 DIWLP-EAEPVDVFELASKNSNRLKLDIVKHWHKSGGVLLIGYDMFRNFIMTLMKRTRSK 1275

Query: 861  NMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 919
            ++   I  AL D GPDI+VCDE H++KN+++  T+A+ Q++  +R+ LTG+PLQNNL EY
Sbjct: 1276 DVRNTISSALLDPGPDIVVCDEGHLMKNSKSHITKAVSQIRTMKRVVLTGTPLQNNLNEY 1335

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 979
            + MVDFV+   LG+  EF NRF NPI+NGQH+NST  DV IM +R+HILY+ L G VQR 
Sbjct: 1336 HTMVDFVKPNLLGTLKEFNNRFGNPIKNGQHSNSTPRDVNIMKKRAHILYKTLDGCVQRK 1395

Query: 980  DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKI------------ 1027
            D +V+ K LPP+  +VI  +L+ +Q+ LY+ FL+ H   N   +                
Sbjct: 1396 DYSVLTKYLPPRYEYVIMCRLTKVQQELYRYFLENHSNLNSNNTLSNNNNNTSTNQDETN 1455

Query: 1028 -RKSFFAGYQALAQIWNHPGILQLTKDK 1054
             RK  F   Q L +I  HP  L++ + K
Sbjct: 1456 HRKKLFMIQQILYRISTHPHALRIHETK 1483



 Score =  194 bits (493), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/261 (38%), Positives = 149/261 (57%), Gaps = 44/261 (16%)

Query: 1093 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEF 1152
            D G  QK WW     +    ++D   KM +L +IL  CS++GDK ++FS S+ +LDL+E 
Sbjct: 1584 DVGECQKPWWYMFYKDEYDWQIDVGAKMDVLFNILKRCSDIGDKVIMFSHSLISLDLVER 1643

Query: 1153 YLSK-----------------------------LPRPGKQGKL-------WKKGKDWYRL 1176
            +L++                             L RP             W +G D+ R+
Sbjct: 1644 FLAEINRQWSVYQDQMSNEKGDENVESSQNPEVLNRPDLSAYFSDIGHNTWIRGLDYERM 1703

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG    + R+ L  RFN   N R++  +IST+AG LGINL SANR+I++D SWNP++D+Q
Sbjct: 1704 DGSMNVNVRKDLQTRFNSTSNTRLRLFIISTKAGGLGINLVSANRLILLDASWNPSHDIQ 1763

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            +I+R++R+GQ+KPV+ YRL+A GT+EEKIY RQVTK+ L+ RV+D  Q+ R  S  ++  
Sbjct: 1764 SIFRSYRFGQSKPVYIYRLIAKGTIEEKIYDRQVTKQSLSLRVIDELQIGRHFSDSDLQE 1823

Query: 1297 LFEF--------GDDENPDPL 1309
            LF F        G+D+ P P+
Sbjct: 1824 LFTFEPDIWNPNGNDKRPTPI 1844



 Score = 68.2 bits (165), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 13/110 (11%)

Query: 493 CTACNNVAIEVHP-------HPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSD 545
           CTAC     ++ P       HP+L VI+CK C    + +   KD    +  C WC    D
Sbjct: 104 CTAC---CCKIQPFSAPFSVHPLLKVILCKRCTMYCKSQNFAKDDAGKDDNCKWCSDGGD 160

Query: 546 LVSCKSCKTLFCTTCVKRNISEACLSDEV---QASCWQCCCCSPSLLKRL 592
           LV C +C    C  C+K+N+    L +     ++  W C  C P+ +K L
Sbjct: 161 LVCCDTCSFAICKKCIKQNLGRTYLRNIESLDESDTWSCFVCDPTPIKTL 210


>gi|400599277|gb|EJP66981.1| SNF2 family domain-containing protein [Beauveria bassiana ARSEF 2860]
          Length = 1654

 Score =  313 bits (802), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 210/616 (34%), Positives = 313/616 (50%), Gaps = 74/616 (12%)

Query: 701  YIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHT 760
            +I+N  +   +  + I   IS+++K HQ+ G+RF+W +I      V+   +  GC+LAHT
Sbjct: 748  FIINESKANDQGFIYIHPEISSRIKEHQIEGVRFLWNHI------VRDSSERQGCLLAHT 801

Query: 761  MGLGKTFQVIAFLYTAMR----SVNLGLR----------TALIVTPVNVLHNWKQEFMKW 806
            MGLGKT Q I FL  A+R    S +L +R            L++ P  ++ NWK EF+ W
Sbjct: 802  MGLGKTMQTITFL-VALRESALSDDLTVRDQIPQDLRDWKVLVLCPSGLVENWKDEFLIW 860

Query: 807  RPSELKPLRVFMLEDV-SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE 865
             P  L    +F +E V S  +R E   +W  +GG+ +IGY  F++    +  K       
Sbjct: 861  APKHLMEA-IFTVEAVHSPLQRVENAKEWAVRGGILIIGYNMFKS----EFRKGNEKTVT 915

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            +   L +   +++ DEAH +KN +   TQ    +K   RIALTGSPL NN+ EYY M+++
Sbjct: 916  VDRILVENARVVIADEAHSLKNPKTKITQVASDLKTSTRIALTGSPLANNVEEYYAMINW 975

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM-NVV 984
            V   FLG   EFR+ +  PI  G + +ST  + +   +   +L       V R  M + +
Sbjct: 976  VAPNFLGPLQEFRDMYATPIHQGLYNDSTPYEKRKAIKLLQVLKTTAAPKVHRATMKSCL 1035

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            K +LPPK  FVI+V  + +QR+LY  ++     + D+V     + + F     LA I  H
Sbjct: 1036 KDELPPKEEFVISVPPTEIQRKLYDLYMQATHNSGDKVE----QATLFGVLNHLALICAH 1091

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +    +      R   E          + +    P+ MN      +D G         
Sbjct: 1092 PAVY---RKHVIELRRKGEMGKDVARFPMDTI----PQIMN----MTSDPGL-------- 1132

Query: 1105 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQG 1164
                     ++ S K+ LL  IL   S MGDK LVFSQSIPTLD    YL+KL       
Sbjct: 1133 -------GRVELSYKVELLNKILDQSSRMGDKVLVFSQSIPTLD----YLAKL------- 1174

Query: 1165 KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
                + + + RLDG T+ S+RQ +V+ FN+      +  LIST AG +G+N+  ANRV+I
Sbjct: 1175 -FGSQKRRFCRLDGSTQISKRQDMVKSFNK---GSEEVYLISTNAGGVGLNIFGANRVVI 1230

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
             D  +NP  D QAI RA+R GQTKPVF YR +  G+ E+ +  + V K  LA+RVVD++ 
Sbjct: 1231 FDFKYNPVSDQQAIGRAYRIGQTKPVFVYRFVVAGSFEDDLQNKAVFKMQLASRVVDQKN 1290

Query: 1285 -VHRTISKEEMLHLFE 1299
             +  +     +LHL +
Sbjct: 1291 PISWSKRMSNLLHLIQ 1306


>gi|354486366|ref|XP_003505352.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator ATRX-like,
            partial [Cricetulus griseus]
          Length = 2726

 Score =  312 bits (800), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 164/375 (43%), Positives = 232/375 (61%), Gaps = 18/375 (4%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVG-------IRFMWENIIQSIRKVKSGDK 751
            T  +++   E  E  V++  ++  KLK HQV G       I F W+   +S++K K    
Sbjct: 1767 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGKKLLNDSIPFSWDCCCESVKKTKKS-P 1825

Query: 752  GLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP--S 809
            G GCILAH MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+   +
Sbjct: 1826 GSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLN 1885

Query: 810  ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICH 868
            + + L V  L  V R + R+ +L +W+  GGV +IGY  +RNL+ GK+VK R +      
Sbjct: 1886 DNEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGKNVKSRKLKEIFNK 1945

Query: 869  ALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            AL D GPD +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++
Sbjct: 1946 ALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIK 2005

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
            E  LGS  EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K 
Sbjct: 2006 ENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKF 2065

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHP 1045
            LPPK  +V+ V+++ +Q +LY+ +LD L G  N       K     F  +Q L++IW HP
Sbjct: 2066 LPPKHEYVLAVRMTAIQCKLYQYYLDHLTGVGNTTEGGRGKAGAKLFQDFQMLSRIWTHP 2125

Query: 1046 GILQL----TKDKGY 1056
              LQL     ++KGY
Sbjct: 2126 WCLQLDYISKENKGY 2140



 Score =  225 bits (574), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 2240 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2299

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 2300 EKTEDKDKPLVYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2359

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2360 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2419

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 2420 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 2458



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 407 CTACGQQVNHFQKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 466

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 594
            C  C   FC  C+ RN+    LS  + + + W C  C P  L  L +
Sbjct: 467 CCDFCHNAFCKKCILRNLGRKELSTILDENNQWYCYICQPEPLLDLVT 514


>gi|317037064|ref|XP_001398334.2| hypothetical protein ANI_1_444154 [Aspergillus niger CBS 513.88]
          Length = 858

 Score =  312 bits (799), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 216/616 (35%), Positives = 313/616 (50%), Gaps = 64/616 (10%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G+  + +   I  ++K HQ+ GI+FMW  + +       G K  GC+LAHTMGLGKT QV
Sbjct: 42   GDPVIYLDPHIGQRVKPHQLHGIQFMWRELTED------GGKHQGCLLAHTMGLGKTMQV 95

Query: 770  IAFLYTAMRSV-------------NLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPL 814
            I+ L T   +              NL     LI+ P +++ NW +EF+ W P  S + P+
Sbjct: 96   ISLLVTIANAAASKNPWIKKQIPDNLLRSQTLILCPSSLIENWYEEFIMWTPKDSAIGPV 155

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--KDRNMARE----ICH 868
               +    S   R   +A W  +GGV LI Y  FR   + K    + + ++ E    I  
Sbjct: 156  NK-VTSSASLAERLNTVALWNDEGGVLLISYDIFRTWVYNKETIRRGKPLSEEEHENIKK 214

Query: 869  ALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
             L +G +I+V DEAH +KN  +  T A  Q + Q RIALTGSPL NNL++Y+ MV+++  
Sbjct: 215  WLLEGANIIVADEAHKMKNPASAITLAAMQFRSQSRIALTGSPLANNLVDYFTMVNWIAG 274

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
            G+LG   EF+  F  PIE G + +ST  + +    +  +L + L+  + R D++V++  L
Sbjct: 275  GYLGEFTEFKANFVEPIEEGLYVDSTYSERRRSLVKLQVLNKILEPKINRADISVLEGSL 334

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            PPK  FVITV L+ +Q+  Y    DL+  +    S +  R    +    L    NHP   
Sbjct: 335  PPKVEFVITVPLTDVQKSAY----DLYVQSILEGSQDFSRMKLLSWLAVLGLCCNHPACF 390

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
               +DK   SR  A D+   + M     I   P +      G + +G   K        E
Sbjct: 391  ---RDKLL-SR--ASDAQKLDRMIDGAAIEPAPGDEPITQLGLDVEGLVSK-------QE 437

Query: 1109 HTYKEL-DYSGKMV-----LLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
              +  + D S   +     +L  I+      GDK LVFS SIPTL+ +E  + K      
Sbjct: 438  QLFSTVPDMSAATLSCRAEILNRIIAESVRAGDKVLVFSHSIPTLNYVENDILK------ 491

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
                WK    + RLDG T  + RQ   ++FN+   + V   LISTRAG LG+N+  ANRV
Sbjct: 492  -AFGWK----YCRLDGSTPMASRQAATKQFNQGSAEDVY--LISTRAGGLGLNIFGANRV 544

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            II D ++NP ++ QA+ RA+R GQ KPVF YR +A GT EE +Y + V K  LA RVVD+
Sbjct: 545  IIFDFTFNPVWEEQAVGRAYRLGQKKPVFVYRFIAGGTFEEVMYNKAVFKTQLAFRVVDK 604

Query: 1283 QQVHRTISKEEMLHLF 1298
            +   R  +K    +LF
Sbjct: 605  KNPIRLATKSLGEYLF 620


>gi|345489021|ref|XP_001603100.2| PREDICTED: transcriptional regulator ATRX homolog [Nasonia
            vitripennis]
          Length = 1506

 Score =  312 bits (799), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 175/469 (37%), Positives = 273/469 (58%), Gaps = 43/469 (9%)

Query: 609  SSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQ 668
            +++SDSE+ D+ N        K +K IR++L D  + ++TK+    E+ER +R+      
Sbjct: 534  ATDSDSEDQDSPN--------KGRKNIRKVLKDKHVADDTKKAAQDEEERLKRI------ 579

Query: 669  FSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQ 728
             + + KL N +  D  L+  A ++ L       +++   E  +E V +   +  +LK HQ
Sbjct: 580  -AERQKLFNEM-YDARLAGEAKVDKL-------VLDFDEETKQELVVVHEELVKRLKPHQ 630

Query: 729  VVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTAL 788
              GI+FMW+   +S+++++  + G GCI+AH MGLGKTFQV+   +T +     G+RT +
Sbjct: 631  AKGIKFMWDACFESLKQIEKSE-GSGCIIAHCMGLGKTFQVVTLAHTLLTHEETGVRTVM 689

Query: 789  IVTPVNVLHNWKQEFMKW--RPSELKPLRVFMLEDVSRD-RRAELLAKWRAKGGVFLIGY 845
            +V P++ + NW  EF  W     +   + ++ L  + ++  R   L  W+  GGV +IGY
Sbjct: 690  VVCPLSTVLNWVNEFKTWLKHVKDGDEIEIYELTKMKKNIERKYQLESWQKTGGVLIIGY 749

Query: 846  TAFRNL-SFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQR 903
              FRNL S GK ++ + M   I  +L D G D++VCDE H++KN  +  ++A+K VK  R
Sbjct: 750  EMFRNLTSTGKKMR-KAMQESIMRSLVDPGADLVVCDEGHLLKNEESALSKAMKLVKTLR 808

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            RI LTG+PLQNNL EY+CMV FV+   LG+  EF NRF NPI NGQ  +ST  DVK+M +
Sbjct: 809  RIVLTGTPLQNNLKEYHCMVQFVKPNLLGTKKEFLNRFVNPITNGQFDDSTPYDVKLMKK 868

Query: 964  RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD----LHGFTN 1019
            R+H+L++ L+G VQR D +V+   LPPK  +VI V+L+ +Q ++Y+ +LD     +G  N
Sbjct: 869  RAHVLHKMLEGSVQRFDYSVLTPFLPPKQEYVIFVRLTDVQIKMYQHYLDNFARRYGQRN 928

Query: 1020 DRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSD 1068
                      S FA +Q L +IW HP +L+L  +K   + E     +SD
Sbjct: 929  G---------SLFADFQELQRIWTHPYVLRLNAEKVEKANEKKRLEASD 968



 Score =  205 bits (521), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/210 (47%), Positives = 132/210 (62%), Gaps = 10/210 (4%)

Query: 1101 WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
            WW+  + E  +++L  S K+ LL  IL     +GDK LVFSQS+ +L LIE +L+ +   
Sbjct: 1040 WWSKFVEEKHFEDLRISTKLSLLFGILKESEQIGDKVLVFSQSLYSLTLIEHFLNLIDNQ 1099

Query: 1161 GKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
             + G            W  G D++RLDG T +  R    + FN P N R +  LISTRAG
Sbjct: 1100 TQDGGEAENLDNHTGTWALGLDYFRLDGSTSAENRSAWCKIFNNPKNTRARLFLISTRAG 1159

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
             LGINL +ANRVII D SWNP++D+Q+I+R +R+GQ KP + YR +A GTMEEKIY RQV
Sbjct: 1160 GLGINLTAANRVIIFDASWNPSHDVQSIFRIYRFGQKKPCYVYRFLAAGTMEEKIYNRQV 1219

Query: 1271 TKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            TK  LA RVVD QQ+ R  S  ++  L++F
Sbjct: 1220 TKLSLACRVVDEQQIERHYSNNDLAELYQF 1249


>gi|295674753|ref|XP_002797922.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226280572|gb|EEH36138.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1797

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 203/622 (32%), Positives = 319/622 (51%), Gaps = 73/622 (11%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV- 769
            +  + + S I A++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QV 
Sbjct: 926  DPVIYLHSHIGARVKPHQLSGIQFMWRELIKD-------EKHQGCLLAHTMGLGKTMQVS 978

Query: 770  IAFLYTAMRSV-------------NLGLRTALIVTPVNVLHNWKQEFMKWRPSE------ 810
            I+ L T   +              NL L   L++ P +++ NW  E + W P +      
Sbjct: 979  ISLLITIANAAASDDPKLRIQVPENLRLSRTLVLCPSSLIENWWDELLMWTPGDDPKTSR 1038

Query: 811  -LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE---- 865
             L P R  +L  +  + R + +A W  +GG+ L+ Y  FR L   K  K+R    +    
Sbjct: 1039 NLGPFRK-ILPTLQLEERLDGIAAWYKEGGILLMSYDIFRALILNKARKNRPPVLDDQAH 1097

Query: 866  --ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMV 923
              +   L +GP I+V DEAH +KN +A   +A      + RIALTGSPL NNL EYY M+
Sbjct: 1098 GRVRKHLLEGPRIIVADEAHKLKNRKAGVAEACGTFVSKSRIALTGSPLANNLREYYAMI 1157

Query: 924  DFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV 983
            D++  G+LG   +F+ ++  PIE G + +S+  + +   ++  +L + +   + R D++V
Sbjct: 1158 DWIAPGYLGEFVQFKAKYIEPIEEGLYADSSQWERRNSLKKLQVLKKDIDPKLNRADISV 1217

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
            +K  LPPK  FVITV L+  Q + Y  ++D      + + N ++    +     L+ + N
Sbjct: 1218 LKGSLPPKVEFVITVPLTTFQEQAYNAYIDALASDKEAMRNPRL----WDWLSILSLLCN 1273

Query: 1044 HPG-ILQLTKDKGYPSREDAEDSS---SDENMDYNVVIGE--KPRNMNDFLQGKNDDGFF 1097
            HP   ++  +D+    +  A + +   SD  M  +  I +   P  +             
Sbjct: 1274 HPACFMEKLRDRSKGVQNSASNWASIDSDCEMPGDAPISQVHSPEMLTS----------L 1323

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
            +K +  DL      + L+ S +  +   I+ +   +GDK L+FS SIPTL+ +E  L   
Sbjct: 1324 EKVFATDL----DLQCLELSYRAQIADKIIELSIAVGDKVLLFSHSIPTLNYLEHVLR-- 1377

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
                      + G+ + RLDG+T  + RQ   + FN       +  LISTRAG LG+N+ 
Sbjct: 1378 ----------QAGRTYSRLDGKTPIATRQISTKNFNS--GSYTQVYLISTRAGGLGLNIP 1425

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRVII D  +NPT++ QA+ RA+R GQ KPVF YR +A GT E+ ++ + V K  L+ 
Sbjct: 1426 GANRVIIFDFQFNPTWEEQAVGRAYRLGQRKPVFVYRFLAGGTFEDIMHNKAVFKTQLSY 1485

Query: 1278 RVVDRQQVHRTISKEEMLHLFE 1299
            RV+D+    R  SK    +LF+
Sbjct: 1486 RVIDKMNPVRWASKFSKDYLFK 1507


>gi|134083903|emb|CAK48807.1| unnamed protein product [Aspergillus niger]
          Length = 1758

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 216/616 (35%), Positives = 313/616 (50%), Gaps = 64/616 (10%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G+  + +   I  ++K HQ+ GI+FMW  + +       G K  GC+LAHTMGLGKT QV
Sbjct: 942  GDPVIYLDPHIGQRVKPHQLHGIQFMWRELTED------GGKHQGCLLAHTMGLGKTMQV 995

Query: 770  IAFLYTAMRSV-------------NLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPL 814
            I+ L T   +              NL     LI+ P +++ NW +EF+ W P  S + P+
Sbjct: 996  ISLLVTIANAAASKNPWIKKQIPDNLLRSQTLILCPSSLIENWYEEFIMWTPKDSAIGPV 1055

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--KDRNMARE----ICH 868
               +    S   R   +A W  +GGV LI Y  FR   + K    + + ++ E    I  
Sbjct: 1056 NK-VTSSASLAERLNTVALWNDEGGVLLISYDIFRTWVYNKETIRRGKPLSEEEHENIKK 1114

Query: 869  ALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
             L +G +I+V DEAH +KN  +  T A  Q + Q RIALTGSPL NNL++Y+ MV+++  
Sbjct: 1115 WLLEGANIIVADEAHKMKNPASAITLAAMQFRSQSRIALTGSPLANNLVDYFTMVNWIAG 1174

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
            G+LG   EF+  F  PIE G + +ST  + +    +  +L + L+  + R D++V++  L
Sbjct: 1175 GYLGEFTEFKANFVEPIEEGLYVDSTYSERRRSLVKLQVLNKILEPKINRADISVLEGSL 1234

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            PPK  FVITV L+ +Q+  Y    DL+  +    S +  R    +    L    NHP   
Sbjct: 1235 PPKVEFVITVPLTDVQKSAY----DLYVQSILEGSQDFSRMKLLSWLAVLGLCCNHPACF 1290

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
               +DK   SR  A D+   + M     I   P +      G + +G   K        E
Sbjct: 1291 ---RDKLL-SR--ASDAQKLDRMIDGAAIEPAPGDEPITQLGLDVEGLVSK-------QE 1337

Query: 1109 HTYKEL-DYSGKMV-----LLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
              +  + D S   +     +L  I+      GDK LVFS SIPTL+ +E  + K      
Sbjct: 1338 QLFSTVPDMSAATLSCRAEILNRIIAESVRAGDKVLVFSHSIPTLNYVENDILK------ 1391

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
                WK    + RLDG T  + RQ   ++FN+   + V   LISTRAG LG+N+  ANRV
Sbjct: 1392 -AFGWK----YCRLDGSTPMASRQAATKQFNQGSAEDV--YLISTRAGGLGLNIFGANRV 1444

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            II D ++NP ++ QA+ RA+R GQ KPVF YR +A GT EE +Y + V K  LA RVVD+
Sbjct: 1445 IIFDFTFNPVWEEQAVGRAYRLGQKKPVFVYRFIAGGTFEEVMYNKAVFKTQLAFRVVDK 1504

Query: 1283 QQVHRTISKEEMLHLF 1298
            +   R  +K    +LF
Sbjct: 1505 KNPIRLATKSLGEYLF 1520


>gi|350634003|gb|EHA22367.1| hypothetical protein ASPNIDRAFT_192985 [Aspergillus niger ATCC 1015]
          Length = 1643

 Score =  311 bits (797), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 215/616 (34%), Positives = 308/616 (50%), Gaps = 64/616 (10%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G+  + +   I  ++K HQ+ GI+FMW  + +       G K  GC+LAHTMGLGKT QV
Sbjct: 918  GDPVIYLDPHIGQRVKPHQLHGIQFMWRELTED------GGKHQGCLLAHTMGLGKTMQV 971

Query: 770  IAFLYTAMRSV-------------NLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPL 814
            I+ L T   +              NL     LI+ P +++ NW +EF+ W P  S + P+
Sbjct: 972  ISLLVTIANAAASENPWIKKQIPDNLLRSQTLILCPSSLIENWYEEFIMWTPKDSAIGPV 1031

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA------REICH 868
               +    S   R   +A W  +GGV LI Y  FR   + K    R           I  
Sbjct: 1032 NK-VTSSASLAERLNTVALWNEEGGVLLISYDIFRTWIYNKETIRRGKPLSEEEHENIKK 1090

Query: 869  ALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
             L +G +I+V DEAH +KN  +  T A  Q + Q RIALTGSPL NNL++Y+ MV+++  
Sbjct: 1091 WLLEGANIIVADEAHKMKNPASAITLAAMQFRSQSRIALTGSPLANNLVDYFTMVNWIAG 1150

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
            G+LG   EF+  F  PIE G + +ST  + +    +  +L + L+  + R D++V++  L
Sbjct: 1151 GYLGEFTEFKANFVEPIEEGLYVDSTHSERRRSLVKLQVLNKILEPKINRADISVLEGSL 1210

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            PPK  FVITV L+ +Q+  Y    DL+  +    S +  R    +    L    NHP   
Sbjct: 1211 PPKVEFVITVPLTDVQKSAY----DLYVQSILEGSQDFSRMKLLSWLAVLGLCCNHPACF 1266

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
               +DK   SR  A D+   + M     I   P +      G + +G   K        E
Sbjct: 1267 ---RDKLL-SR--ASDAQKLDRMIDGAAIEPAPGDEPITQLGLDVEGLVSK-------QE 1313

Query: 1109 HTYKELD------YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
              +  +        S +  +L  I+      GDK LVFS SIPTL+ +E  + K      
Sbjct: 1314 QLFSTVPDMSAATLSSRAEILNRIIAESVRAGDKVLVFSHSIPTLNYVENDILK------ 1367

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
                WK    + RLDG T  + RQ   ++FN+   + V   LISTRAG LG+N+  ANRV
Sbjct: 1368 -AFGWK----YCRLDGSTPMASRQAATKQFNQGSAEDV--YLISTRAGGLGLNIFGANRV 1420

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            II D ++NP ++ QA+ RA+R GQ KPVF YR +A GT EE +Y + V K  LA RVVD+
Sbjct: 1421 IIFDFTFNPVWEEQAVGRAYRLGQKKPVFVYRFIAGGTFEEVMYNKAVFKTQLAFRVVDK 1480

Query: 1283 QQVHRTISKEEMLHLF 1298
            +   R  +K    +LF
Sbjct: 1481 KNPIRLATKSLGEYLF 1496


>gi|312072535|ref|XP_003139110.1| hypothetical protein LOAG_03525 [Loa loa]
          Length = 770

 Score =  310 bits (794), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 195/566 (34%), Positives = 303/566 (53%), Gaps = 91/566 (16%)

Query: 819  LEDVSRDRRAELLAKW--RAKGGVFLIGYTAFRNLSFG-------------KHVKDRNMA 863
            L+D +  R A  L  W    +  V +IGY  FR L+ G             K  K++ +A
Sbjct: 6    LKDYTNRRLA--LQNWFENDEPSVMIIGYDMFRILTQGDDDKGKKRIDGMKKTTKNKKLA 63

Query: 864  REICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMV 923
            +     +Q      + D A           + + +++ +RR+ LTG+PLQNNLMEY+CMV
Sbjct: 64   K-----MQPDFRKFLQDPA---------LAKTMLKIRTKRRLCLTGTPLQNNLMEYHCMV 109

Query: 924  DFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV 983
            +FV+ G LG+  EF NRF N I  G+  ++T  +V+ M +R H+LYE LK  V R D  V
Sbjct: 110  NFVKPGLLGTKTEFANRFVNIINRGRTKDATPAEVRHMKKRCHVLYEHLKNVVDRKDYRV 169

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
            + + +PPK  +V+ V+L+P Q  LY+ FLD  G     +S     +     Y  L++IW 
Sbjct: 170  LTEAIPPKQEYVVNVRLTPRQISLYRTFLDGIGPEGILLS-----RRLLPDYHVLSRIWT 224

Query: 1044 HPGIL-----QLTKDKGYPS---------REDAEDSSSDENMDYNVVI---GEKPRNMN- 1085
            HP  L     +L K + +            +D  ++SS+ + D +V+     ++P   N 
Sbjct: 225  HPYQLIAHQIELEKKRLWEDDRDEMADFINDDGSETSSEVDSDDDVIPLDNNDQPETSNR 284

Query: 1086 --------------DFLQGKNDDGFFQKDWWND--LLHEHTYKELDYSGKMVLLLDILTM 1129
                          D  +GK     ++ +W+    L+ E    +   S K++LL++I+  
Sbjct: 285  PVVPARKSRRLAGEDAEEGKEIMPEYE-EWFTKTGLVTEADRNDFSLSNKLMLLVEIIKK 343

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLP-------------RPGKQGKLWKKGKDWYRL 1176
               +GDK LVFSQSI ++ LI+  L  +              +  K+   W++G+D+  +
Sbjct: 344  SEEIGDKLLVFSQSIESISLIKRMLQYMDENDAWFTDGHEAMKAAKESWGWREGRDYMVI 403

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG+ ++S+R ++  +FN+P N R +  LISTRAGSLG N+ +ANRV+I D  WNP++D Q
Sbjct: 404  DGQVQTSKRHEIQTKFNDPNNLRARLMLISTRAGSLGTNMVAANRVVIFDACWNPSHDTQ 463

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            +++R +R+GQTKPV+ YR +A GTMEE+IYKRQVTKE  + RVVD  Q+ R  +  ++L 
Sbjct: 464  SLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDEAQIERHFAGHDLLE 523

Query: 1297 LFEFGDDENPD-------PLTAVSKE 1315
            L++F  DE  D       PL A  K+
Sbjct: 524  LYKFDPDELDDTQNVPKRPLMAPPKD 549


>gi|606833|gb|AAC50069.1| helicase II [Homo sapiens]
          Length = 1641

 Score =  309 bits (792), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 161/369 (43%), Positives = 233/369 (63%), Gaps = 12/369 (3%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCILA
Sbjct: 676  TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 734

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVL-HNWKQEFMKWRPS--ELKPLR 815
            H MGLGKT QV++FL+T +    L   TAL+    ++L  NW  EF KW+    + + L 
Sbjct: 735  HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVGLSSSILAFNWMNEFEKWQEGLKDDEKLE 794

Query: 816  VFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-G 873
            V  L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D G
Sbjct: 795  VSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPG 854

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
            PD +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS
Sbjct: 855  PDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGS 914

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
              EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   + K LPPK  
Sbjct: 915  IKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHE 974

Query: 994  FVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL- 1050
            +V+ V+++ +Q +LY+ +LD L G  N+      K     F  +Q L++IW HP  LQL 
Sbjct: 975  YVLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLD 1034

Query: 1051 ---TKDKGY 1056
                ++KGY
Sbjct: 1035 YISKENKGY 1043



 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 1142 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 1201

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 1202 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 1261

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 1262 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 1321

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 1322 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 1360


>gi|407923111|gb|EKG16199.1| SNF2-related protein [Macrophomina phaseolina MS6]
          Length = 1900

 Score =  309 bits (792), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 214/633 (33%), Positives = 324/633 (51%), Gaps = 91/633 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            IVN        A+ I  SI  ++K HQ+ G+RFMW  I+++           GC+LAHTM
Sbjct: 910  IVNPGEYGKSGAIYIHRSIGGRIKTHQIEGVRFMWREIVEA-----GHTDPQGCLLAHTM 964

Query: 762  GLGKTFQVIAFLYT---AMRSVNLGLRT----------ALIVTPVNVLHNWKQEFMKWRP 808
            GLGKT Q I  L T   A +S N  +R+           LI+ P +++ NW  E   W P
Sbjct: 965  GLGKTMQAITLLVTIADAAKSPNEDVRSQIPEELRRVQTLILCPASLVDNWVDELYAWIP 1024

Query: 809  SELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMA 863
              L   ++  +  ++ +     R + +  W  KGG+ ++ Y  FR L  GK   K  N  
Sbjct: 1025 KSLSD-KIGHVRSIAAESDLTIRLKKIRNWDQKGGILVMSYEMFRTLLSGKWASKFSNEE 1083

Query: 864  R-EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
            R E+   L + P I++ DEAH +KN+ +     +++   + R+ALTGSPL NNL+EY+ M
Sbjct: 1084 RQELARQLFERPSIIIADEAHKMKNSSSSLRGLVERFSSKSRVALTGSPLANNLIEYWSM 1143

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
            +D++  G+LGS  EF+  F  PIE G +  ST  + +   ++  +L  ++   + R D+ 
Sbjct: 1144 IDWISPGYLGSLKEFKANFVEPIEEGLYKESTKYEHRKALKKLRVLKNEIGPKINRADIT 1203

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYK---RFLDLHGFTNDRVSNEKIRKSFFAGYQALA 1039
             +K DL PK  F+ITV L+ LQ  LY+   +F+       ++VSN K+    +     L 
Sbjct: 1204 ALKDDLKPKVEFLITVPLTSLQEDLYRLCVQFVLTQ--RQEKVSNTKL----WQWMHLLN 1257

Query: 1040 QIWNHPG----ILQLTKDKGYPSRE---------DAEDSSSDE---NMD-----YNVVIG 1078
             I  HP     + ++ + +GY  ++         D ED+S+DE   N+D     + V+I 
Sbjct: 1258 TICTHPAAFYKLFKVLQARGYDGKQVFAEESEGNDLEDTSTDELALNLDSKQDLFPVLIE 1317

Query: 1079 EKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSL 1138
            +    ++   Q  + D              H++K         +L++IL    + GD+ L
Sbjct: 1318 QA---ISKCTQAPDLDS-----------PRHSFK-------TSILMNILDKSKSAGDRVL 1356

Query: 1139 VFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNK 1198
            VFSQ I TLD    YL +L        L K+   + RLDG+T+ S R +L+E+FNE    
Sbjct: 1357 VFSQQIATLD----YLERL--------LTKERYKFIRLDGKTKMSNRPELLEKFNE---G 1401

Query: 1199 RVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAH 1258
                 LISTRAG  G NL  ANRVII+D  +NP  + QAI RA+R GQ K VF YR++  
Sbjct: 1402 NYDLFLISTRAGGTGFNLPGANRVIILDFGFNPQNEEQAIGRAYRLGQEKEVFVYRILTG 1461

Query: 1259 GTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            GT E K++ + + K  LA+RV+D +   R   K
Sbjct: 1462 GTFEPKVWNKALFKTQLASRVIDTRNPERHAEK 1494


>gi|226290585|gb|EEH46069.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 1761

 Score =  309 bits (792), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 202/622 (32%), Positives = 317/622 (50%), Gaps = 73/622 (11%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV- 769
            +  + + S I A++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QV 
Sbjct: 926  DPVIYLHSHIGARVKPHQLSGIQFMWRELIKD-------EKHQGCLLAHTMGLGKTMQVS 978

Query: 770  IAFLYTAMRSV-------------NLGLRTALIVTPVNVLHNWKQEFMKWRPSE------ 810
            I+ L T   +              +L L   L++ P +++ NW  E + W P +      
Sbjct: 979  ISLLITIANAAASDDPKVRIQVPESLRLSRTLVLCPSSLIENWWDELLMWTPGDDPKTSR 1038

Query: 811  -LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE---- 865
             L P R  +L  +  + R + +  W  +GG+ L+ Y  FR L   K  K+R    +    
Sbjct: 1039 NLGPFRK-ILPTLQLEERLDGITAWYKEGGILLMSYDIFRALILNKARKNRPPVLDDHAH 1097

Query: 866  --ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMV 923
              +   L +GP I+V DEAH +KN +A   +A      + RIALTGSPL NNL EYY M+
Sbjct: 1098 GRVRKHLLEGPRIIVADEAHKLKNRKAGVAEACGTFVSKSRIALTGSPLANNLREYYAMI 1157

Query: 924  DFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV 983
            D++  G+LG   +F+ ++  PIE G + +S+  + +   ++  +L + +   + R D++V
Sbjct: 1158 DWIAPGYLGEFVQFKAKYIEPIEEGLYADSSQWERRNSLKKLQVLKKDIDPKLNRADISV 1217

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
            +K  LPPK  FVITV L+  Q + Y  ++D      + + N ++    +     L+ + N
Sbjct: 1218 LKGSLPPKVEFVITVPLTTFQEQAYNAYIDALASDKEAMGNPRL----WDWLSILSLLCN 1273

Query: 1044 HPG-ILQLTKDKGYPSREDAEDSS---SDENMDYNVVIGE--KPRNMNDFLQGKNDDGFF 1097
            HP   ++  +D+    +  A + +   SD  M  +  I +   P  +             
Sbjct: 1274 HPACFMEKLRDRSKGVQNSASNWASIDSDCEMPGDAPISQVHSPEMLTS----------L 1323

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
            +K +  DL      + L  S +  +   I+ +   +GDK L+FS SIPTL+ +E  L   
Sbjct: 1324 EKVFATDL----DLQSLKLSYRAQIADKIIELSIAVGDKVLLFSHSIPTLNYLEHVLR-- 1377

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
                      + G+ + RLDG+T  + RQ   + FN       +  LISTRAG LG+N+ 
Sbjct: 1378 ----------QAGRTYSRLDGKTPIATRQISTKNFNS--GSYTQVYLISTRAGGLGLNIP 1425

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRVII D  +NPT++ QA+ RA+R GQ KPVF YR +A GT E+ ++ + V K  L+ 
Sbjct: 1426 GANRVIIFDFQFNPTWEEQAVGRAYRLGQRKPVFVYRFLAGGTFEDIMHNKAVFKTQLSY 1485

Query: 1278 RVVDRQQVHRTISKEEMLHLFE 1299
            RVVD+    R  SK    +LF+
Sbjct: 1486 RVVDKMNPVRWASKFSKDYLFK 1507


>gi|402077244|gb|EJT72593.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
            [Gaeumannomyces graminis var. tritici R3-111a-1]
          Length = 1837

 Score =  308 bits (788), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 220/693 (31%), Positives = 348/693 (50%), Gaps = 98/693 (14%)

Query: 626  GGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDL 685
            G   K++K+++R     ++ E  KR++   ++++ER  +L+ Q +S        T+ G+ 
Sbjct: 749  GSPSKKRKQVKRDKGAMDMRENDKRRL---EQQEERRHALRRQLASMG------TVSGEK 799

Query: 686  SAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRK 745
            S               I+N  +E+    + + + ++  +K HQ+ G+RFMW  +I     
Sbjct: 800  SR-------------LIINETKEESHGLIYVTNQMADSIKDHQIQGVRFMWNQVI----- 841

Query: 746  VKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG------------LRTA--LIVT 791
                +   GC+LAHTMGLGKT QVI  L  A+   +L             LR +  L++ 
Sbjct: 842  -ADEENSQGCLLAHTMGLGKTMQVICLL-VAIAEASLSDDPSLFSQIPEELRESKTLVLC 899

Query: 792  PVNVLHNWKQEFMKWRPSEL--KPLRVFM----LEDVSRDRRAELLAKWRAKGGVFLIGY 845
            P  ++ NW  E  +W P  +  K  +V      LED     R  ++ +W   GGV ++GY
Sbjct: 900  PSGLVQNWLDELARWAPMGILGKYYKVDAELPELED-----RFGVVQEWAKNGGVLIVGY 954

Query: 846  TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRI 905
              FR LS      +R    E+   L++ P+I+V DEAH +KN+ + T+    + K + RI
Sbjct: 955  PMFRILS------ERGSEAEV-ELLKETPNIVVGDEAHHMKNSASKTSMHTARFKTKTRI 1007

Query: 906  ALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRS 965
            A+TGSPL N++ +YY MV++V   +LG   EF + +  PI+ G + +S+S + +   +  
Sbjct: 1008 AMTGSPLANSVKDYYAMVNWVAPNYLGPPEEFASVYATPIQEGLYQDSSSGEKRKALKLL 1067

Query: 966  HILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNE 1025
              L + +   + RM M  +K  LPPK  F+I V L+ LQ   Y  +++    T  R +  
Sbjct: 1068 KALKDTVAPKIHRMTMAALKDQLPPKKEFIIYVPLTKLQMDAYSMYMEYFSRTEVRENMP 1127

Query: 1026 KIRKSFFAGYQALAQIWNHPGI----LQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKP 1081
             I    F     L+ +  HP +    L+  KD        A+  ++ +        GEK 
Sbjct: 1128 SILH-LFDQVSQLSMLLAHPRVFLTRLKEIKDNWGKGTVSAKSRAAKDQ-------GEK- 1178

Query: 1082 RNMNDFLQGKNDDGFFQKDWWNDL---LHEHTYKELDYSGKMVLLLDILTMCSNMGDKSL 1138
                   +GK  +    +D   +L   L+     E   S KMV+LL IL       DK L
Sbjct: 1179 -----GSRGKG-ESMLPRDLVGELIKCLNVRDSGEFSLSHKMVVLLRILEEAKAQKDKVL 1232

Query: 1139 VFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNK 1198
            +FS SIPTLD +E  +  L +P            + RLDG+T  S RQ LV +FN+ L+ 
Sbjct: 1233 LFSSSIPTLDFLESVMKTLRKP------------YSRLDGKTVISRRQGLVAKFNQNLD- 1279

Query: 1199 RVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAH 1258
              +  LIST AG +G+N+  ANR++I+D  W+P  + QAI RA+R GQ+KPVF Y L+  
Sbjct: 1280 --EVYLISTTAGGVGLNIQGANRIVIMDFKWSPVNEQQAIGRAYRIGQSKPVFVYWLIVG 1337

Query: 1259 GTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            GT E K++ + + K  LA+RVVD++  H   +K
Sbjct: 1338 GTYEPKLHGKAIFKTQLASRVVDKKNPHSYANK 1370


>gi|443692394|gb|ELT93989.1| hypothetical protein CAPTEDRAFT_221494 [Capitella teleta]
          Length = 1305

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 156/355 (43%), Positives = 227/355 (63%), Gaps = 10/355 (2%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            +T  +   V +  E  + +   +  KLK HQ   + F+W++ ++S++++KSG +G GCIL
Sbjct: 407  VTTRLALDVSDDNEIRIEVHKKLVRKLKPHQTEAVEFLWDSCVESLKQLKSGHEGSGCIL 466

Query: 758  AHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF 817
            AH MGLGKT   IAF++T M+S   G+ T LIV P+N + NW+ E+ KW     + +RVF
Sbjct: 467  AHCMGLGKTLSTIAFIHTLMKSKECGVGTVLIVCPLNTVLNWQTEWNKWLDKRDR-VRVF 525

Query: 818  MLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLS-FGKHVKDRNMAREICHALQDGPD 875
             +  V   + RA  L KW   GGV ++GY  +R L+ +    K    A + C  +  GPD
Sbjct: 526  EMASVKGTKERAAQLVKWHEGGGVIIMGYQLYRRLANYPGRSKRTKEAYDKC-LMDPGPD 584

Query: 876  ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
            +++CDE H++KN  +  ++A+ +VK +RRI LTG+PLQNNL+EY+CMV+FV+   LGS  
Sbjct: 585  LIICDEGHILKNDCSAISKAICKVKTKRRIVLTGTPLQNNLIEYHCMVNFVKPNLLGSRR 644

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFV 995
            EF NRF NPI NGQH++ST  DVK+M +R+H+L+E L G VQR D   + K LPPK  +V
Sbjct: 645  EFSNRFVNPITNGQHSDSTVHDVKVMKRRAHVLHEMLAGCVQRKDYADLTKLLPPKHEYV 704

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQL 1050
            ++V+LS LQ  LYK++L      N   S+E  R   FA YQ+L +IW HP +L+L
Sbjct: 705  LSVRLSRLQIELYKKYL----AENKSTSDEGQR--LFADYQSLMRIWTHPWVLKL 753



 Score =  226 bits (575), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/281 (44%), Positives = 171/281 (60%), Gaps = 23/281 (8%)

Query: 1058 SREDAEDSSSDENMDY---NVVIGEKPRNMNDFLQGKN------DDGFFQ---KDWWNDL 1105
            S ED +  + DE  D     V+ GE  R+     + K       DD + Q   K WW D+
Sbjct: 823  STEDEDMMTEDEETDVRKAKVIAGEVIRSWQSRYRCKKAALDLEDDPYKQRINKAWWQDM 882

Query: 1106 LHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR-----P 1160
            L E   K++  SGK+VLL  IL M  ++G+K LVFSQS+ +LDLIE +L          P
Sbjct: 883  LQEDHCKQIQLSGKLVLLKHILQMTKSLGEKLLVFSQSLLSLDLIELFLGHETENAKSDP 942

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
                  W K +D+ RLDG T +  R++++E FN P N R+   LIST+AG LGINL +AN
Sbjct: 943  SSNSSQWLKDEDYLRLDGSTLAHNRKRMIEAFNNPKNCRLCLLLISTKAGGLGINLEAAN 1002

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            RVII D SWNP++D+Q+I+R +R+GQ + V+ YR +A GTMEEKIY+RQVTKE L+ RV+
Sbjct: 1003 RVIIFDASWNPSHDVQSIFRVYRFGQERNVYVYRFLAQGTMEEKIYERQVTKETLSQRVI 1062

Query: 1281 DRQQVHRTISKEEMLHLFEFG----DDEN--PDPLTAVSKE 1315
            D QQ+ R  S+ ++  L++F     DD N  P P  AV K+
Sbjct: 1063 DEQQIDRHFSQADLQELYQFTPDSLDDRNCKPRPTPAVPKD 1103


>gi|358373231|dbj|GAA89830.1| SNF2 family helicase/ATPase [Aspergillus kawachii IFO 4308]
          Length = 1768

 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 213/616 (34%), Positives = 308/616 (50%), Gaps = 64/616 (10%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G+  + +   I  ++K HQ+ GI+FMW  + +       G K  GC+LAHTMGLGKT QV
Sbjct: 951  GDPVIYLDPHIGQRVKPHQLHGIQFMWRELTED------GGKHQGCLLAHTMGLGKTMQV 1004

Query: 770  IAFLYT---AMRSVNLGLR----------TALIVTPVNVLHNWKQEFMKWRP--SELKPL 814
            I+ L T   A  S N  +R            LI+ P +++ NW +EF+ W P  S + P+
Sbjct: 1005 ISLLVTIANAAVSENPWIRKQIPDDLLRSQTLILCPSSLIENWYEEFIMWTPKDSAIGPV 1064

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA------REICH 868
               +    S   R + +A W  +GGV LI Y  FR     K    R           I  
Sbjct: 1065 NK-ITSSASLSERLDTVASWNEEGGVLLISYDIFRTWIHNKETSKRGQPLTEEQHENIKK 1123

Query: 869  ALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
             L +G +I+V DEAH +KN  +  T A  Q + Q RIALTGSPL NNL++Y+ MV+++ +
Sbjct: 1124 WLLEGANIIVADEAHKMKNPVSGITLAAMQFRSQSRIALTGSPLANNLVDYFTMVNWIAK 1183

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
            G+LG   EF+  F  PIE G + +ST  + +    +  +L + L+  + R D++V++  +
Sbjct: 1184 GYLGEFTEFKANFVEPIEEGLYVDSTHSERRRSLVKLQVLNKILEPKINRADISVLEGSM 1243

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            PPK  FVITV L+ +Q+  Y    DL+  +    S +  R    +    L    NHP   
Sbjct: 1244 PPKVEFVITVPLTAVQKSAY----DLYVQSVLEGSEDVSRMKLLSWLAVLGLCCNHPACF 1299

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
               +DK      +A+    D+ +D    I   P +      G + +    K        E
Sbjct: 1300 ---RDKLLSRASEAQ--KLDKVLD-GAAIEPAPGDEPITQLGLDVETLVSK-------QE 1346

Query: 1109 HTYKELDYSGKMVL------LLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
              +  +   G   L      L  I+      GDK LVFS SIPTL+ +E  + K      
Sbjct: 1347 QLFSTVPDMGAATLSCRAEILNRIIAESVRAGDKVLVFSHSIPTLNYVENDILK------ 1400

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
                WK    + RLDG T  + RQ   + FN+   + V   LISTRAG LG+N+  ANRV
Sbjct: 1401 -ASNWK----YCRLDGSTPIANRQHATKLFNQGSAEDV--YLISTRAGGLGLNIFGANRV 1453

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            II D ++NP ++ QA+ RA+R GQ KPVF YR +A GT EE +Y + V K  LA RVVD+
Sbjct: 1454 IIFDFTFNPVWEEQAVGRAYRLGQKKPVFVYRFIAGGTFEEVMYNKAVFKTQLAFRVVDK 1513

Query: 1283 QQVHRTISKEEMLHLF 1298
            +   R  ++    +LF
Sbjct: 1514 KNPIRLATRSLGEYLF 1529


>gi|408399646|gb|EKJ78744.1| hypothetical protein FPSE_01112 [Fusarium pseudograminearum CS3096]
          Length = 1894

 Score =  307 bits (786), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 203/602 (33%), Positives = 308/602 (51%), Gaps = 82/602 (13%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQ--SIRKVKSGDKGLGCILAH 759
            I+N  +E+ +  + +   I+  +K HQV G+RF+W  I++  S+R+        GC+LAH
Sbjct: 897  IINESKEEDQGLIYVNDHIARSIKQHQVDGVRFIWNQIVRDASVRQ--------GCLLAH 948

Query: 760  TMGLGKTFQVIAFLY-------------TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW 806
            TMGLGKT QVI  L               A    +L     L++ P  ++ NW  E +KW
Sbjct: 949  TMGLGKTMQVITVLVALAEASESQDPSVVAQIPKDLQNSRTLVLCPAALVDNWMDELLKW 1008

Query: 807  RPSE-LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE 865
             P+  L  LR     +     R  ++  W +  GV L+GY  F+ L         +M+ E
Sbjct: 1009 APANALGALRK-CTANTPEHERPSIVTSWASGKGVLLVGYKMFQKLI--------DMSPE 1059

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            + + L+D PD++VCDEAH +KN  + T  A  + + + RIALTGSPL NN++EY+ M+D+
Sbjct: 1060 LSNLLRDRPDVVVCDEAHHMKNRESKTNIACSRFQTKSRIALTGSPLSNNVLEYFAMIDW 1119

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            V   FLG   EFR  +  P+E G + +S+  + +        L + +   V R ++ V+K
Sbjct: 1120 VAPNFLGPYSEFREIYSAPVERGLYHDSSPAEKREAQMVLKALEQMVAPKVHRRNIVVLK 1179

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
             DLPPK  F+I V  + LQ++LY+ +  + G + +    +      FA    L  I +HP
Sbjct: 1180 GDLPPKQEFIIFVPPTELQKKLYRLY--IKGVSREGADTQ---AGTFAAIFHLGLICSHP 1234

Query: 1046 GILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDL 1105
               Q            A+ S   +N   + V             G+  D  F K    + 
Sbjct: 1235 KCFQ------------AKISEIIQNQLMSKV-------------GEETDKSFPKTIIPEF 1269

Query: 1106 LHE-HTYKELD---YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG 1161
                 ++ +LD   +S K  LL  IL     + DK LVFSQS+ TLD    YL K+ +  
Sbjct: 1270 TRTLESFADLDSPAFSWKTELLTTILNEAREVNDKVLVFSQSLDTLD----YLEKMCK-- 1323

Query: 1162 KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                   +G+   RLDG+T  ++RQ+ V+ FN+      +  LIST AG +G+N+  ANR
Sbjct: 1324 ------TQGRTVSRLDGKTRVADRQQQVKDFNQ---GSKEVFLISTAAGGVGLNIQGANR 1374

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            V+I D  +NP+++ QA+ RA+R GQ K VF YR M  GT E+ +  RQV K  LA+RVVD
Sbjct: 1375 VVIFDIRYNPSHEQQAVGRAYRIGQQKKVFVYRFMVAGTFEDNLNNRQVFKMQLASRVVD 1434

Query: 1282 RQ 1283
            ++
Sbjct: 1435 KK 1436


>gi|156052062|ref|XP_001591992.1| hypothetical protein SS1G_07439 [Sclerotinia sclerotiorum 1980]
 gi|154705216|gb|EDO04955.1| hypothetical protein SS1G_07439 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1863

 Score =  306 bits (785), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 217/691 (31%), Positives = 347/691 (50%), Gaps = 90/691 (13%)

Query: 633  KKIRRILDDAE---LGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            KK R+  +DA    L E+ + ++  ++ER+++L++         +LM S  + GD+    
Sbjct: 802  KKPRKFFEDANARNLREQDRARVTAQEERKKQLRA---------RLMESDNV-GDV---- 847

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
                   A+  +I+N  +   +  + I   I  ++K HQ+ G+RF+W  I         G
Sbjct: 848  -------ALDRHIINEGKFDDQGYIYIDKEIGKRIKPHQLDGVRFIWNQI------TADG 894

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVN-------------LGLRTALIVTPVNVL 796
                GC+LAHTMGLGKT Q I  L    ++ +             L +   +++ P  ++
Sbjct: 895  KATQGCLLAHTMGLGKTMQTITILVALAQAASSKDESISSQVPESLRVSKTIVLCPPGLI 954

Query: 797  HNWKQEFMKWRP----SELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRN-L 851
             NW  E + W P     +L+P+        S D R   +  W  +GG+ LIGY  FR  +
Sbjct: 955  ANWVDELLTWSPDDILGDLRPVE----SASSLDSRFRTINDWFHEGGILLIGYDMFRKFI 1010

Query: 852  SFGKHVKDRNMAREICHALQ-------DGPDILVCDEAHMIKNTRADTTQALKQVKCQRR 904
            +  K   D+ +       ++       +GP+I+V DEAH +KN  +    A  Q K + R
Sbjct: 1011 TTPKPKPDKPLTHSYISKMERAKAQLLEGPNIIVADEAHKMKNYNSALNWAASQFKSKTR 1070

Query: 905  IALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQR 964
            IALTGSPL NN+ EY+ MV++V   +LG   EFR +++ PIE G   +S+ ++     + 
Sbjct: 1071 IALTGSPLANNVEEYHTMVEWVAPNYLGPIDEFRKKYKEPIEQGLFIDSSRQERFNSKKM 1130

Query: 965  SHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL-DLHGFTNDRVS 1023
              +L   L   V R D +V++ DLPPK  FVI V L+ LQ++ Y  ++  +      R  
Sbjct: 1131 LEVLKGDLSPKVHRADTSVLRDDLPPKKEFVINVSLTELQKQAYITYVRSMSSQKPARTK 1190

Query: 1024 NEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM--DYNVVIGEK 1080
            + +++++    Y   L  + NHP   +   D+   S E   +S SD  +    +   G++
Sbjct: 1191 SGELKQTTVWSYINILTLLCNHPYCFKAKLDER--SSEVHGNSQSDTRIATTSHCRKGKR 1248

Query: 1081 PRNMNDFLQGKNDDGFFQKDWWNDLLHEH--------TYKELDYSGKMVLLLDILTMCSN 1132
               +++ L+  ND   ++     DL+           + +  + S K+ +L  IL     
Sbjct: 1249 TDVIDEDLE--NDPEAWKIGVSEDLISAEAKVFESVESIRNPELSNKVRILCQILDASKA 1306

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
            +GDK LVFSQ++ TLD +E    +            +G+ + RLDG+T   +RQ +V+ F
Sbjct: 1307 VGDKVLVFSQTLVTLDFLEDMCKE------------QGRKYARLDGKTAMGKRQAIVKDF 1354

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N   +  ++  LIST AG LG+NL+ ANRV+I D  +NP  + QAI RA+R GQ K VF 
Sbjct: 1355 N---SNNLELYLISTNAGGLGLNLYGANRVVIFDFRYNPINEEQAIGRAYRIGQKKHVFV 1411

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            YRLMA GT E  I  + V K  LA+RVVD++
Sbjct: 1412 YRLMAAGTFENSIQNKAVFKTQLASRVVDKK 1442


>gi|342885837|gb|EGU85789.1| hypothetical protein FOXB_03637 [Fusarium oxysporum Fo5176]
          Length = 1979

 Score =  306 bits (784), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 214/694 (30%), Positives = 344/694 (49%), Gaps = 105/694 (15%)

Query: 611  ESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFS 670
            E   E  D D+ ++ G   +++ K + I+ D       K  + + +   +RL+    Q +
Sbjct: 942  EEQDEMDDFDDVVEEGRAGRRRPKEKEIIRD-------KAAVDLRERENQRLRE---QEA 991

Query: 671  SKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVV 730
             + KL  ++ LDG +S            T  I+N  +E+ +  + I   I  ++K HQ+ 
Sbjct: 992  RRKKLRETLALDGSVSRDG---------TRLIINESKEEDQGLIYIHEDIGRRIKDHQID 1042

Query: 731  GIRFMWENIIQ--SIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY-----------TAM 777
            G+RF+W  I++  S+R+        GC+LAHTMGLGKT QVI  L            + +
Sbjct: 1043 GVRFIWNQIVRDPSVRQ--------GCLLAHTMGLGKTMQVITVLVALAEAAQSKDPSVV 1094

Query: 778  RSVNLGLRTA--LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWR 835
              +   LR    L++ P  ++ NW  E +KW P++L      +  +   + RA +++ W 
Sbjct: 1095 AQIPEDLREPRILVLCPAALVDNWIDELLKWAPADLLGELRKVSSNTPVEERAAVVSSWA 1154

Query: 836  AKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQA 895
            +  GV  +GY  F+ +         N++ E+   L + PD+++ DEAH +KN  + T  A
Sbjct: 1155 SGRGVLTLGYEMFKKIM--------NLSEELADLLTNRPDVVIADEAHKMKNRESQTNLA 1206

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
              + + + RIALTGSPL N+++EY+ M+D+V   FLG   EF + + +P+E G + +ST 
Sbjct: 1207 SSRFRTKSRIALTGSPLSNSVLEYFAMIDWVAPNFLGPFSEFSHIYASPVERGLYNDSTP 1266

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
             + +    R   L + +   + R  +  +K DLPPK  F+I V  +  Q++LY+  L + 
Sbjct: 1267 AEKRRAQMRLKALEQLVAPKINRHTIAALKSDLPPKQEFIIFVPPTTPQKQLYQ--LYIR 1324

Query: 1016 GFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQL---TKDKGYPSREDAEDSSSDENMD 1072
            G   +   ++      FA    L  I +HP   +       KG  S  D ED S  ++M 
Sbjct: 1325 GVAREGTDSQ---AETFAAINHLGLICSHPRCFEAKVKAIQKGIRSNSDNEDKSFPKSM- 1380

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD---YSGKMVLLLDILTM 1129
                       + +FL+                   H++++L+    S K  LL  IL  
Sbjct: 1381 -----------IPEFLETL-----------------HSFRDLETPTLSLKTELLTIILDE 1412

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
               + DK L+FSQS+ TLD IE  + ++ R           +   RLDG T    RQ+  
Sbjct: 1413 ARQVKDKVLIFSQSLHTLDYIE-NMCRMQR-----------RTVSRLDGSTPVPSRQRQT 1460

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            + FNE      +  LIST AG +G+N+  ANRV+I D  +NP+ + QA+ RA+R GQ KP
Sbjct: 1461 KDFNE---GSKEVFLISTTAGGVGLNIQGANRVVIFDVRYNPSDEQQAVGRAYRIGQQKP 1517

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            VF YR M  GT E+ ++ RQV K  LA+RVVD++
Sbjct: 1518 VFVYRFMVAGTFEDNLHNRQVFKMQLASRVVDKK 1551


>gi|47222591|emb|CAG02956.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1174

 Score =  306 bits (783), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 171/441 (38%), Positives = 254/441 (57%), Gaps = 29/441 (6%)

Query: 614  SENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKS 673
            S+  DA++   + G  K ++KIR+I+DD  L  ET+  +  E+ER +RL     Q   + 
Sbjct: 506  SDKEDANSEPSVKGTPKGRRKIRKIMDDENLRSETQEALREEEERCKRLADRDSQMEDRR 565

Query: 674  KLMN---SVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVV 730
            ++     SVT                  T  I++   E     V++   +   LK HQV 
Sbjct: 566  EVSEDSFSVT------------------TKLILDQDEETKTPLVQVHRDLVTSLKPHQVD 607

Query: 731  GIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIV 790
            G++FMW+   +S+++  S   G GCILAH MGLGKT QV+ F +T + S NL  RTAL++
Sbjct: 608  GVQFMWDCCCESVKEANSS-HGSGCILAHCMGLGKTLQVVTFFHTVLLSENLKFRTALVI 666

Query: 791  TPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRN 850
             P+N + NW  EF KW+   +   RV +        R   L KW  +GGV ++GY  +R 
Sbjct: 667  CPLNTVLNWVYEFKKWQ-RNMGSERVDVCPADHIRGRLRALQKWYREGGVMIMGYEMYRL 725

Query: 851  LSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTG 909
            LS      D     E+   L + GPD +VCDE H+++N  +  ++AL  +K +RR+ LTG
Sbjct: 726  LSQTAKTNDEVWRNELKGILVNPGPDFVVCDEGHILRNDASGISKALNAIKTRRRVVLTG 785

Query: 910  SPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILY 969
            +PLQNNL+EY+CMV+F++   LGS  EFRNRF NPI+NGQ  +STS DV++M +R+H+L+
Sbjct: 786  TPLQNNLVEYHCMVNFIKNDLLGSLREFRNRFINPIQNGQCADSTSRDVRVMKKRAHVLH 845

Query: 970  EQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRK 1029
              L G VQR D +V+ + LPPK  FVI V+++PLQ +LY+ +LD    T+D   N++  +
Sbjct: 846  AMLAGCVQRKDYSVLAEFLPPKQEFVIAVRITPLQCKLYRYYLDHITGTSD--GNKRWFR 903

Query: 1030 SFFAGYQALAQIWNHPGILQL 1050
            +   G    A+I  H G + L
Sbjct: 904  NLLTGD---AKIMEHSGKMVL 921



 Score =  203 bits (516), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/221 (47%), Positives = 143/221 (64%), Gaps = 11/221 (4%)

Query: 1086 DFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIP 1145
            D + G +D     K W+ +LL     K +++SGKMVLL  IL M   + +K LVFSQ + 
Sbjct: 889  DHITGTSDGN---KRWFRNLLTGDA-KIMEHSGKMVLLFKILRMAEELEEKVLVFSQFLL 944

Query: 1146 TLDLIEFYL------SKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKR 1199
            +LDLIE YL      + L    K  + W+K  D++R+DG      R+K  + FN   N R
Sbjct: 945  SLDLIERYLQTSHAATGLSSSVKVSR-WEKNVDYFRIDGSVGPQLRKKWADEFNNAANNR 1003

Query: 1200 VKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHG 1259
             K  LIST+AGSLGINL +A+RV+I D SWNP+YD+Q++YR +R+GQ +PVF YR +A G
Sbjct: 1004 CKLLLISTKAGSLGINLVAASRVVIFDASWNPSYDVQSVYRVYRFGQVRPVFVYRFLAQG 1063

Query: 1260 TMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            TMEEKIY RQVTK+ L+ RVVD+QQ+ R  +  E+  L+ F
Sbjct: 1064 TMEEKIYDRQVTKQSLSNRVVDQQQIERHFTLHELTELYTF 1104


>gi|453083636|gb|EMF11681.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
          Length = 1356

 Score =  302 bits (773), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 228/708 (32%), Positives = 341/708 (48%), Gaps = 109/708 (15%)

Query: 626  GGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDL 685
            G  RK+ +KI ++  +AE  +      A    RQ++ K +Q + S+  +L   +  D   
Sbjct: 513  GTPRKKNQKIVKLNANAEQSQ------AAAFRRQQKFKEMQSEGSNSKELRAMIQADPSN 566

Query: 686  SAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRK 745
            S  A I  L             + GE+ + +   I++ LK HQ+ GI+FMW  +      
Sbjct: 567  STVA-INPLASL----------DDGEDYIFVDKKIASALKEHQIEGIQFMWRELT----- 610

Query: 746  VKSGDKGLGCILAHTMGLGKTFQVIAFLYT---AMRSVNL--------GLRTA------- 787
             +  D G GCILAHTMGLGKT Q IA L     A RS N          LR         
Sbjct: 611  AQGSDGGQGCILAHTMGLGKTLQTIATLVALNEATRSENPRVYKQVPEHLRPPDIRERQL 670

Query: 788  --LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL----LAKWRAKGGVF 841
              LI+ P  ++ NW++E   W P       +F +E V   RR E     L  W   GG+ 
Sbjct: 671  RMLIILPAALIQNWRREIRTWAPHVFT--NIFTVESVP-SRRPEQTIDELEGWFNIGGIL 727

Query: 842  LIGYTAFRNLSFGK----HVKDRNMAR------EICHALQDGPDILVCDEAHMIKNTRAD 891
             + Y  F+  +  +      K +  A+      ++   L  GP+I+V DE H +KN +A 
Sbjct: 728  FMTYGLFQRYANWRDPEAEAKRKPAAKLAPFGTKLDKYLIKGPEIVVADEVHSLKNPKAK 787

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
             T+A + +  + RI LTG+P+ N++ E Y +V F    +LG    F   + NPI+ G   
Sbjct: 788  VTRAAQSIHTESRIGLTGTPMSNDVDEIYSLVSFAAPNYLGEKTWFNQTYSNPIKEGNRK 847

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
            +S   DV+ M ++  +L  Q++  V R D+NV++  L PK  FVI + LS +QR  YK++
Sbjct: 848  DSEPSDVRRMLKKLAVLRNQIEPKVHRADINVLRGSLKPKLEFVIIMPLSDIQRVTYKKY 907

Query: 1012 LDLHGFTNDRVSNEKI--RKSFFAGYQALAQIWNHP------GILQLTKD----KGYPSR 1059
              L   + D  +  KI  +   FA   AL  + NHP       ++  TK     +  PS 
Sbjct: 908  --LAALSKDESNLNKIVSQTRIFAWLAALTLLMNHPLAFKRKLLMHQTKKTLQRESTPSG 965

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
             D ED   DE +  ++    K +   D + G +D+                    + S K
Sbjct: 966  IDLEDLDMDEAIQ-SLAFSNKVK--QDIVAGIDDN-----------------LRAESSMK 1005

Query: 1120 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
            M++LL I+       DK LVFS SIPTLD +E  L             K      R+DG 
Sbjct: 1006 MLMLLRIIRHAGKCHDKILVFSGSIPTLDYVEELLR------------KSHIQCGRIDGS 1053

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
               S+RQ ++  F++  N      L+ST+AG +G+N+  ANRV+I+D  +NP+++ QA+ 
Sbjct: 1054 VAISKRQPIINAFHKSEN---GVLLMSTKAG-VGLNIQGANRVVILDFGFNPSHEEQAVG 1109

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            RA+R GQTKPVF YRL+  GT E+ IY +Q+ K  L  RVVD++   R
Sbjct: 1110 RAYRLGQTKPVFVYRLIIGGTFEDNIYDKQMFKTSLTQRVVDKKNPRR 1157


>gi|358391786|gb|EHK41190.1| hypothetical protein TRIATDRAFT_321436 [Trichoderma atroviride IMI
            206040]
          Length = 1877

 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 227/733 (30%), Positives = 353/733 (48%), Gaps = 92/733 (12%)

Query: 615  ENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSK 674
            E SD   N+     + +K+  R I+       + K  + + ++ ++R +  + + +   K
Sbjct: 811  ELSDHSANVTQSSSKPRKRATREIV-------QNKEGVELREQGKKRAEEYEARAAKNLK 863

Query: 675  LMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRF 734
            L    TL   ++ G +           I+N  ++ G+  + I   I  ++K HQ+ G+RF
Sbjct: 864  L---ATLSSTMTEGEA---------RLIINESKQDGQPFIYISRKIGERIKDHQIKGVRF 911

Query: 735  MWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS-----------VNLG 783
            +W  II +       D   GC+LAHTMGLGKT QVI  L     +           + + 
Sbjct: 912  LWNQIILN------ADLRQGCLLAHTMGLGKTMQVITLLVAIAEASHSDNEAIKAQIPMD 965

Query: 784  LRTA--LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV-SRDRRAELLAKWRAKGGV 840
            LRT+  LI+ P  ++ NW +E   W P  +    VF +E   S+  +   +  W   GGV
Sbjct: 966  LRTSQSLIICPAGLVINWLEEINAWSPEGILG-NVFKVESAQSKSNQISTIEYWAEYGGV 1024

Query: 841  FLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVK 900
             ++G+  F+        ++ NM       L D  +I++CDEAH +KN  +   Q  +   
Sbjct: 1025 LVMGHEMFKR----TRAENDNMK----QILTDKANIVICDEAHTMKNPDSQLHQVCQDFL 1076

Query: 901  CQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKI 960
             +RRIALTGSPL NN+ EYY M+++V   +LG   EF + +  PIE G    S+  + + 
Sbjct: 1077 TRRRIALTGSPLSNNIKEYYSMINWVAPRYLGPQKEFADIYAEPIERGLDRESSWSEKRK 1136

Query: 961  MNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTND 1020
              +   +L   +   VQR  + VVK +LPPK  FV+ VK +PLQ +LY  +L+     + 
Sbjct: 1137 ALKMLEVLKMTVAPKVQRATVQVVKHELPPKYEFVLFVKPNPLQEKLYGIYLNEMVAASS 1196

Query: 1021 RVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDKGYPSREDAEDSSSDENMDYNVVIGE 1079
            + S  K    F A    L  I NHP    QL  ++   S+       S        V G 
Sbjct: 1197 KTSVVK----FVA---QLGVICNHPRCFRQLMLNEKAASKTPKAAQQS--------VRGP 1241

Query: 1080 KPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL---DYSGKMVLLLDILTMCSNMGDK 1136
                 +D  +       F  +  + +L E   K++   + S K+ LLL +L     MGDK
Sbjct: 1242 GDEGTDDESESHGRSTKFPPNMISTVLKETNGKDIANPELSQKVALLLVVLDQARAMGDK 1301

Query: 1137 SLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVERFNEP 1195
             LVFS+SI TLD +E             +L+K+ +    RLDG T  S+RQ +V+ FN  
Sbjct: 1302 VLVFSESILTLDYLE-------------ELFKQQRRAVQRLDGSTPVSKRQGMVKAFNTG 1348

Query: 1196 LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRL 1255
                 +  LIST+AG +G+N+  ANRV+I D  WNP  + QA+ R++R+GQ K V+ YR 
Sbjct: 1349 KAGESEIYLISTKAGGVGLNIQGANRVVIFDFKWNPVNEQQAVGRSYRFGQQKTVYVYRF 1408

Query: 1256 MAHGTMEEKIYKRQVTKEGLAARVVDRQQ----------VHRTISKEEMLHLFEF-GDDE 1304
            +  G+ EE +  R + K  LA+RVVD+            + + ++ +    L  F G D 
Sbjct: 1409 VIAGSFEEGLQNRSIFKTQLASRVVDKANPIAWGKRNGDLFKPMATKPASDLSPFLGQDT 1468

Query: 1305 NPDPLTAVSKENG 1317
              D L  +SK+NG
Sbjct: 1469 ILDKLIELSKDNG 1481


>gi|195122656|ref|XP_002005827.1| GI20681 [Drosophila mojavensis]
 gi|193910895|gb|EDW09762.1| GI20681 [Drosophila mojavensis]
          Length = 1457

 Score =  301 bits (771), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 164/417 (39%), Positives = 237/417 (56%), Gaps = 55/417 (13%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN+   +GEE + +   I+  +K HQ+ G+RF+++NII+SIR+ K    G GCILAH+M
Sbjct: 178  VVNIAHPEGEETLYLAPQIAKVIKPHQIGGVRFLYDNIIESIRRFKKS-SGFGCILAHSM 236

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV----- 816
            GLGKT QV++F    +R  +   +T L V P+N L NW  EF  W P +   L V     
Sbjct: 237  GLGKTLQVVSFCDIFLR--HTSAKTVLCVMPINTLQNWLSEFNMWIPRQSNDLNVRPRNF 294

Query: 817  --FMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR------------ 860
              F+L D  ++   RA+++  W  +GGV LIGY  FR L+  K V  R            
Sbjct: 295  DIFVLNDQQKNLTARAKVILNWVHRGGVLLIGYELFRLLAL-KLVSTRKKKGKNSQMNDI 353

Query: 861  --------NMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPL 912
                    NMA E    ++ GPD+++CDE H IKN+ A  + ALKQ++ +RRI LTG PL
Sbjct: 354  HDSSKDLMNMAFEAL--VKPGPDLVICDEGHRIKNSHAGISLALKQIRTRRRIVLTGYPL 411

Query: 913  QNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQL 972
            QNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R+H+L+  L
Sbjct: 412  QNNLLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLL 471

Query: 973  KGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFF 1032
             GFVQR    V++  LP K  +VI V+++P QR+LY  F+            + +RK  F
Sbjct: 472  LGFVQRRSHTVLQCTLPQKLEYVILVRMTPFQRKLYDTFM-----------TDVVRKKAF 520

Query: 1033 A----GYQALAQIWNHPGIL-----QLTKDKGYPSREDAEDSSSDENMDYNVVIGEK 1080
                  +    +IWNHP +L     +   D      E++  S++   +D NV + EK
Sbjct: 521  PNPLKAFAVCCKIWNHPDVLYNYLKKCETDLDLEIDEESSKSTTSTVIDANVCVPEK 577



 Score =  177 bits (448), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/244 (40%), Positives = 144/244 (59%), Gaps = 12/244 (4%)

Query: 1059 REDAEDSSSDENMD-----YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE 1113
            ++ AEDS S+E  +     Y  V+ +  +     L+ K +D F    W  D++  +   +
Sbjct: 690  QQSAEDSKSNELNNSGKPIYGNVVNDAAKKT---LKTKRNDEF-SCSWAVDIMKNYISGQ 745

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
            +  S KM +   I+      GD+ L+FSQS+ TL+LIE +L     PG     W +   +
Sbjct: 746  ISSSPKMEIFFCIMKESIYKGDRILLFSQSLLTLNLIEGFLKSSYVPGTNS-FWMRNSSY 804

Query: 1174 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
            +RLDG T S ER++LV  FN   N  +K  LISTRAGSLGINL  ANRVII D SWNP +
Sbjct: 805  FRLDGSTSSQERERLVNEFNA--NCNIKLFLISTRAGSLGINLTGANRVIIFDASWNPCH 862

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEE 1293
            D QA+YR +RYGQTKP + YR++    +E+KIY RQ+ K+G++ R+VD       +S ++
Sbjct: 863  DTQAVYRIYRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVDECNPEAHLSMKD 922

Query: 1294 MLHL 1297
            + +L
Sbjct: 923  ITNL 926


>gi|357604963|gb|EHJ64400.1| transcriptional regulator ATRX [Danaus plexippus]
          Length = 1986

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 172/456 (37%), Positives = 261/456 (57%), Gaps = 28/456 (6%)

Query: 606  IVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSL 665
            I +  ESD   S+ +N    G  +  +K IR+++   +L E TK+    EKER  R+   
Sbjct: 979  IKNVDESDGSGSETENE---GRNKHGRKNIRKVMSKNQLEEATKKAAKEEKERIARIAER 1035

Query: 666  QVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLK 725
            Q       KL N++  D    +G   EV+ D +   +++   E  E  + +   +  KLK
Sbjct: 1036 Q-------KLYNNLEFD---ESGKPDEVVLDKV---VLDFDPETKEPLIEVDKGLVKKLK 1082

Query: 726  AHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL-GL 784
             HQ  GI+FMW    +S++++K  DKG GCILAH MGLGKT QV++  +T +   +L G+
Sbjct: 1083 PHQANGIKFMWNACFESVKRIKK-DKGSGCILAHCMGLGKTLQVVSLTHTLLTHSSLTGV 1141

Query: 785  RTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR----DRRAELLAKWRAKGGV 840
               L+V P++ + NW  EF  W         V + E +SR      R+  L+ W A GGV
Sbjct: 1142 NRVLVVCPLSTVLNWVNEFRIWLKHTENEYDVDVYE-LSRFKQNSERSYQLSSWFASGGV 1200

Query: 841  FLIGYTAFRNLSFGKHVKDRNMAR-EICHALQD-GPDILVCDEAHMIKNTRADTTQALKQ 898
             ++GY  FRNLS   + K +         +L D GPD++VCDE H++KN +   +QA+ +
Sbjct: 1201 CVLGYEMFRNLSSDTNKKFKKKMMKSFQESLVDPGPDLVVCDEGHLLKNEKTSLSQAMNR 1260

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            V+  RRI LTG+PLQNNL EYYCMV FV+   LG  +E+ NRF NPI NGQ+T+ST  D+
Sbjct: 1261 VRTLRRIVLTGTPLQNNLKEYYCMVQFVKPNLLGKYNEYLNRFVNPITNGQYTDSTEHDI 1320

Query: 959  KIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT 1018
            ++M +RSH+L++ L G VQR D  V+   LPPK  +V+ + L+ +Q +LY+ +LD   ++
Sbjct: 1321 RVMKRRSHVLHKMLDGAVQRRDYGVLAPFLPPKHEYVLFITLTEVQIKLYQHYLD--NYS 1378

Query: 1019 NDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
               ++  K     F  +Q+L +IW HP +L+   ++
Sbjct: 1379 RKPLAG-KSSGFLFPDFQSLQRIWTHPLVLKYNSER 1413



 Score =  208 bits (530), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 97/211 (45%), Positives = 139/211 (65%), Gaps = 10/211 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            +WW  L+ E    ++ +S K+VLL DIL  C  +GDK LVFSQS+ +LDLIE +L K+  
Sbjct: 1511 EWWMTLVSEDELDDMRHSHKLVLLFDILRQCEAIGDKLLVFSQSLYSLDLIEHFLGKVDD 1570

Query: 1160 PGKQGKL----------WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
              ++ ++          W  G D++RLDG T    R    + FN   N R +  LISTRA
Sbjct: 1571 ATQEARVDEKLNGHVGSWSPGIDYFRLDGSTSCENRSIWCKNFNREDNPRARLFLISTRA 1630

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LGINL +ANRV+I D SWNP++D+Q+I+R +R+GQ KP + YR +A GTMEEKIY+RQ
Sbjct: 1631 GGLGINLVAANRVVIFDVSWNPSHDVQSIFRVYRFGQKKPCYIYRFLAMGTMEEKIYERQ 1690

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            VTK+ ++ RV+D QQ+ R  ++ ++  L++F
Sbjct: 1691 VTKQAISKRVIDEQQIDRHYAENDLAELYKF 1721


>gi|310793157|gb|EFQ28618.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001]
          Length = 1813

 Score =  301 bits (770), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 201/614 (32%), Positives = 309/614 (50%), Gaps = 81/614 (13%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            I+N  ++  +  V +   I  ++K+HQ+ G+RFMW  I+    KV+ G     C+LAHTM
Sbjct: 881  IINDAKKDNQGLVYVNEHIGKQIKSHQINGVRFMWNQIVDD-SKVRQG-----CLLAHTM 934

Query: 762  GLGKTFQVIAFLYTAMRSVN-------------LGLRTALIVTPVNVLHNWKQEFMKWRP 808
            GLGKT QVI  L     S               L     L++ P  ++ NW  E + W P
Sbjct: 935  GLGKTMQVITLLVAIAESAQSEDESIRSQIPEELRQSKTLVLCPSVLVDNWMDELLMWAP 994

Query: 809  SELKPLRVFMLEDVSR-DRRAELLAKWRAKGGVFLIGYTAFRNL--SFGKHVKDRNMARE 865
              L   R+F LE +++   R  ++ +W  +GGV +IGY  F+ L  S    +   + A+ 
Sbjct: 995  DGLL-GRLFKLEAITKAPERGPMVRRWDEEGGVLIIGYDMFKRLVDSPANELPSPHDAKS 1053

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            +   L   P ++V DEAH +KN  +    A  Q + Q RIALTGSPL N+++E+Y M+D+
Sbjct: 1054 VKEILTQSPSLVVADEAHKMKNPNSKLATATAQFRTQSRIALTGSPLANSVLEFYYMIDW 1113

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM-NVV 984
            V  G+LG   EF + +  PI  G + +S     +   ++  +L   ++    R  + + +
Sbjct: 1114 VAPGYLGPIQEFSSLYAQPIHLGLYEDSPKSAYRKAMKQLAVLEATVQPKTHRATIKSCL 1173

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQ---- 1040
            K DLPPK  FV+TV ++P+Q +LY  FL            E +RK    G + L      
Sbjct: 1174 KDDLPPKMEFVLTVPVTPIQAKLYDTFL------------ESLRKEERGGGKILGAVNSF 1221

Query: 1041 --IWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
              I NHP   Q        +R   E  +  +    N+ +  +   ++D L+        +
Sbjct: 1222 CLIANHPKTFQ--------TRLREERHALGKRDKSNLTLTSQ--IISDGLKITG----LE 1267

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
            KD  +  L          S K+ LL+ IL    ++GDK L+F+QSIPT+D    YL  L 
Sbjct: 1268 KDISSPAL----------SWKVRLLVAILNESESVGDKVLIFTQSIPTMD----YLDSLF 1313

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
            R        ++ +   RLDG T  S+RQ+ ++ FN   +   +  +IST AG  G+N+  
Sbjct: 1314 R--------QQKRKVARLDGNTPISQRQQNIKDFN---SGDTQLYIISTAAGGTGLNIFG 1362

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANRV+I D  +NP ++ QAI RA+R GQ KPV+ Y  +  GT E+ ++ R + K  LA+R
Sbjct: 1363 ANRVVIFDFKYNPIHEQQAIGRAYRIGQQKPVYVYTFICGGTYEQTLHDRAIFKTHLASR 1422

Query: 1279 VVDRQQVHRTISKE 1292
            VVD +   R  +KE
Sbjct: 1423 VVDNENPKRWSTKE 1436


>gi|449300908|gb|EMC96919.1| hypothetical protein BAUCODRAFT_68867 [Baudoinia compniacensis UAMH
            10762]
          Length = 805

 Score =  300 bits (769), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 197/621 (31%), Positives = 304/621 (48%), Gaps = 71/621 (11%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            +N VR+ G   + I   I+  +K +Q+ G+RF+W+ I  S       D   G ILAHTMG
Sbjct: 39   INPVRKLGFAPIHIHPHIARSMKDYQINGVRFLWKAI--SFSDCDEDDSRQGAILAHTMG 96

Query: 763  LGKTFQVIAFLYTA-----------MRSVNLGLRT----------ALIVTPVNVLHNWKQ 801
            LGKT Q IA L               R +   LR+           LI+ P  ++ NW++
Sbjct: 97   LGKTMQSIALLVAVKEASESDNEAITRQLPPHLRSESFRDQRQLRMLILCPPTLIRNWQR 156

Query: 802  EFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 861
            E  +W P  L    +F +E   ++ R E +  W   GGV LIGY  FR+    K  K  +
Sbjct: 157  ELDQWAPEALG--NIFTVERGKKEARIEEMNTWYRVGGVLLIGYAKFRDFVLRKGRKGID 214

Query: 862  M-AREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
            +   ++   L DGP++++ DE H IKN  +D   A  + K + RI L+G+P+ NN++E Y
Sbjct: 215  VDGAQLDKVLLDGPEVVIADEVHNIKNRTSDIAVAANRFKTETRIGLSGTPMSNNVVEIY 274

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
             +V +   G+L    EF+  +  PIE G + +S++ +V+ M ++  +L+ ++   V R D
Sbjct: 275  ALVSWACPGYLSEPTEFQANYVEPIEAGLYEDSSAYEVRKMKKKLFVLHHRIAPKVDRQD 334

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQ 1040
            +  ++  L PK  FVITV L+ +Q  +YKR++       D  + +  + + F     L  
Sbjct: 335  ITALRGSLKPKMEFVITVPLTAVQSAIYKRYVG--ALLGDSKNAKASQVTIFGWLNLLML 392

Query: 1041 IWNHPGILQLTKDKGYPS--------REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKN 1092
            + NHP   +       P            AE +  +E++     +G     +   L G  
Sbjct: 393  LTNHPAAFRKKLLTPVPPKKAKKGKDAALAEPAPFEEDL---FALGFTEAVVKAIL-GDI 448

Query: 1093 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEF 1152
            DD         D  H         S KM +LL IL +    GDK L+FS SIPT+  +E 
Sbjct: 449  DDAI-------DPAH---------SAKMSILLGILRLSVKCGDKVLIFSGSIPTIRFVEE 492

Query: 1153 YLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
             LS                    +DG   +  R +L+E+F+          +ISTRAG +
Sbjct: 493  LLS------------SNNVAHGTIDGSVPADTRIELIEKFHR---HAFDVLIISTRAGGV 537

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+N+  ANRV+++D  +NPT++ QAI RA+R GQTKPVF YR +A GT E  +Y  Q+ K
Sbjct: 538  GLNIQGANRVVLLDFGFNPTWEEQAIGRAYRLGQTKPVFVYRFVAGGTFETNLYNTQLFK 597

Query: 1273 EGLAARVVDRQQVHRTISKEE 1293
              L+ RVVD++   R   + +
Sbjct: 598  TSLSHRVVDKKNSRRNAKRSD 618


>gi|443732022|gb|ELU16914.1| hypothetical protein CAPTEDRAFT_222005 [Capitella teleta]
          Length = 2313

 Score =  300 bits (769), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 158/393 (40%), Positives = 237/393 (60%), Gaps = 33/393 (8%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            IT  +V    E  E  + +   +  KLK HQV  ++F+W + ++ + ++++ ++G GCIL
Sbjct: 1361 ITTKLVLEFDENKEPILEVNPKLIRKLKPHQVEAVKFLWNSCVEDLERLRT-EEGSGCIL 1419

Query: 758  AHTMGLGKTFQVIAFLYTAMRSVNLG-LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV 816
            AH MGLGKT  VI+F+ T M +  L  +RT L+VTP+N + NW+ EF KW   +   + V
Sbjct: 1420 AHCMGLGKTLSVISFISTLMFNEELTKIRTCLVVTPLNTVLNWQAEFAKWLGEDA--MDV 1477

Query: 817  FMLEDVSRD-RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD--- 872
            + +  V  +  R +LL  W+  GG+ +IGY  +R L+  + VK++   +     L D   
Sbjct: 1478 YEMSSVKNNWGRMDLLQSWQEGGGIMIIGYELYRILTQHQRVKNKKQKKAFTETLADPGI 1537

Query: 873  ----------------GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNL 916
                            GPDI+VCDE H++KN  +  ++A+ Q+K +RRI LTG+PLQNNL
Sbjct: 1538 LVNDRLVVVVNELVNAGPDIVVCDEGHILKNDASGMSKAMNQIKTKRRIILTGTPLQNNL 1597

Query: 917  MEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV 976
             EY+CMV FV+ G LG+  EF NRF NPI NGQ ++STS DVK+M +R+HIL++ L G V
Sbjct: 1598 AEYHCMVSFVKPGLLGTRKEFCNRFVNPITNGQCSDSTSRDVKVMKRRAHILHDLLAGCV 1657

Query: 977  QRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS-----NEKIRKSF 1031
            QR D + + K LPPK  +VI+V+LS +Q  LY+R+L+   FTN  +      N+  R   
Sbjct: 1658 QRRDYSALTKFLPPKNEYVISVRLSKVQMELYERYLNT--FTNRGMDSGPGCNKGAR--L 1713

Query: 1032 FAGYQALAQIWNHPGILQLTKDKGYPSREDAED 1064
            F+ YQ L +IW HP +L++ + +    R + ED
Sbjct: 1714 FSDYQNLMKIWTHPWVLRMDEIRQETKRWNKED 1746



 Score =  214 bits (544), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 102/231 (44%), Positives = 142/231 (61%), Gaps = 16/231 (6%)

Query: 1094 DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFY 1153
            D     +WW DLL +  +  L+  GK+ LL ++L M   +GDK LVFSQS+ +L+LIE +
Sbjct: 1859 DQPLSTEWWGDLLTKEDHYNLELGGKLSLLAEVLKMAGAIGDKVLVFSQSLLSLNLIEDF 1918

Query: 1154 LSKLPRPGKQ----------------GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLN 1197
            L       ++                   W  G D++R+DG T +  RQ   E+FN+P N
Sbjct: 1919 LEHWDTSAEKLEEDEADEGEGVHLSGNHTWIHGADYFRMDGSTSAQLRQSWAEQFNQPSN 1978

Query: 1198 KRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMA 1257
             R +  LIST+AGSLGINL +ANRVI+ D SWNPT+D+Q+I+R +R+GQ KP + YR +A
Sbjct: 1979 DRARLFLISTKAGSLGINLVAANRVIVFDASWNPTHDVQSIFRVYRFGQKKPTYVYRFLA 2038

Query: 1258 HGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
             GTMEEKIY+RQVTK  L++RV+D  Q+ R  S  ++  L+ F  D   DP
Sbjct: 2039 QGTMEEKIYERQVTKLSLSSRVIDEHQIERHFSSSDLAELYLFKPDRLDDP 2089



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 36/220 (16%)

Query: 418 PDSSELRG-IKRSNESE---EPNSEKKRSRTIIIGSDEADVVKDECSTKLEDHSV--SPE 471
           P++ ++ G I+  NES    EP++ K  + ++    DE+  + ++ +  L + +V   PE
Sbjct: 88  PEAMDVGGAIQILNESSGGPEPSTSKAPAPSVKSNGDESIDIDEKGNIILPEGTVVVEPE 147

Query: 472 NIND--AATDNSLHSQSLSEKFYCTAC-----NNVAIEVHPHPILNVIVCKDCKCLLEKK 524
           + +   A       ++S  +   CTAC      N       HP+L V++CK C       
Sbjct: 148 DADSVPAGFKGGSRAESDDQVIVCTACRKQINTNSINNTKKHPVLQVLICKRCYKWYMSD 207

Query: 525 MHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACLSDEVQAS-----C- 578
              +D+D  +  C WCG   DL+ C  C   FC  C++RN+ +  LS  ++A      C 
Sbjct: 208 EIEQDSDGLDNQCRWCGEGGDLICCDYCSNAFCKDCIRRNLGQHYLSQILEAGGLHMICY 267

Query: 579 -----------------WQCCCCSPSLLKRLTSELGRAMG 601
                            W C  C P  L  L +E  + + 
Sbjct: 268 FRYLNFADFKLADEKQKWHCFVCDPQPLTPLITECNKIIA 307


>gi|321468014|gb|EFX79001.1| hypothetical protein DAPPUDRAFT_319936 [Daphnia pulex]
          Length = 547

 Score =  300 bits (769), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 162/411 (39%), Positives = 235/411 (57%), Gaps = 29/411 (7%)

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            AL ++  +RRI L+G+PLQNNLME++ MV+FV  G LG++ +F   F      GQ  +S 
Sbjct: 86   ALNRISTRRRIMLSGTPLQNNLMEFFTMVEFVNPGLLGTNTQFEENFVKVFVKGQTVDSE 145

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD- 1013
              DV+ M  RS IL++ L+  +QR D+NV+   LPPK  +V++V+LS LQ +LYK +L+ 
Sbjct: 146  LSDVRAMKVRSFILHKTLENTLQRFDINVLTPFLPPKLEYVVSVRLSELQIKLYKSYLEN 205

Query: 1014 -LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
               G       ++ +    F  YQ L+QI  HP  L L   K        E+S  +E  +
Sbjct: 206  VTKGSAVQPTESKVVNAGLFHDYQKLSQICTHPKALILAVSK------TEEESDLEEKQE 259

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 1132
                                 D      WW+DL+ +    ++D+ GK++LL+DIL  C  
Sbjct: 260  LA-------------------DQASSSTWWSDLVSDEEINKIDHGGKILLLMDILRHCEK 300

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
            +G+K LVFSQS+  LDLIE +L+      +  K W   KD++R+DG T+  +R +    F
Sbjct: 301  IGEKLLVFSQSLAALDLIEEFLAN--NASEVSKTWNLNKDYFRMDGSTKPEKRLEWGTAF 358

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N+P N R +  L ST+AG +GINL  ANRVII D SWNP+ D Q+++RA+R GQ KP + 
Sbjct: 359  NDPKNPRARFFLTSTKAGGIGINLKGANRVIIFDVSWNPSVDEQSVFRAYRLGQHKPCYV 418

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            YR +A GTMEE +Y RQV K  L+ R+VD +Q  R  +  ++  L+ F  D
Sbjct: 419  YRFVAQGTMEEIMYYRQVEKLALSRRIVDGEQTERHFASNDLKDLYAFDPD 469


>gi|195382577|ref|XP_002050006.1| GJ20429 [Drosophila virilis]
 gi|194144803|gb|EDW61199.1| GJ20429 [Drosophila virilis]
          Length = 1034

 Score =  300 bits (769), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 164/437 (37%), Positives = 245/437 (56%), Gaps = 51/437 (11%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN+   +GEE + +   I+  +K HQ+ G+RF+++NII+S R+ K    G GCILAH+M
Sbjct: 178  VVNIAHPEGEETLYLAPQIAKVIKPHQIGGVRFLYDNIIESTRRFKKS-SGFGCILAHSM 236

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE-----LKP--L 814
            GLGKT QV++F    +R  +   +T L V P+N L NW  EF  W P +     ++P   
Sbjct: 237  GLGKTLQVVSFCDIFLR--HTSAKTVLCVMPINTLQNWLSEFNMWIPRQSADLNVRPRNF 294

Query: 815  RVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSF-----------------GK 855
             +F+L D  ++   RA+++  W  KGGV LIGY  FR L+                    
Sbjct: 295  DIFVLNDQQKNLTARAKVILNWVHKGGVLLIGYELFRLLALKLVSTRKKRGNKNSQINDM 354

Query: 856  HVKDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN 914
            H   +++   +  AL + GPD+++CDE H IKN+ A  + ALKQ++ +RRI LTG PLQN
Sbjct: 355  HDSSKDLMNLVYEALVKPGPDLVICDEGHRIKNSHAGISLALKQIRTRRRIVLTGYPLQN 414

Query: 915  NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG 974
            NL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R+H+L+  L G
Sbjct: 415  NLLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLG 474

Query: 975  FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA- 1033
            FVQR    V++  LPPK  +VI V+++P QR+LY  F+            + +RK  F  
Sbjct: 475  FVQRRSHTVLQCTLPPKLEYVILVRMTPFQRKLYDTFM-----------TDVVRKKAFPN 523

Query: 1034 ---GYQALAQIWNHPGILQLTKDK---GYPSREDAEDSSSDENMDYNV---VIGEKPRNM 1084
                +    +IWNHP +L     K   G  S ++ E   ++ N + N+   +I  +  ++
Sbjct: 524  PLKAFAVCCKIWNHPDVLYNFLKKCLDGSTSSQERERLVNEFNANRNIKLFLISTRAGSL 583

Query: 1085 NDFLQGKNDDGFFQKDW 1101
               L G N    F   W
Sbjct: 584  GINLTGANRVIIFDASW 600



 Score =  139 bits (351), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 105/167 (62%), Gaps = 10/167 (5%)

Query: 1165 KLWKKGKDWYR-----LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
            K+W      Y      LDG T S ER++LV  FN   N+ +K  LISTRAGSLGINL  A
Sbjct: 533  KIWNHPDVLYNFLKKCLDGSTSSQERERLVNEFNA--NRNIKLFLISTRAGSLGINLTGA 590

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NRVII D SWNP +D QA+YR +RYGQTKP + YR++    +E+KIY RQ+ K+G++ R+
Sbjct: 591  NRVIIFDASWNPCHDTQAVYRIYRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMSDRI 650

Query: 1280 VDRQQVHRTISKEEMLHL-FEFGDDENPDPLTAVSKENGQGSSQNTN 1325
            VD       +S  ++ +L  ++  D   DP+ +  +++ + ++QN +
Sbjct: 651  VDECNPEAHLSMRDITNLCHDYSSDG--DPIDSDGQKSNEPTTQNND 695


>gi|340520664|gb|EGR50900.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1846

 Score =  299 bits (766), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 215/679 (31%), Positives = 340/679 (50%), Gaps = 101/679 (14%)

Query: 631  QKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGAS 690
            +K   R I+ D E G + + +   EK R + L++ +V+  +     N+++ D        
Sbjct: 802  RKHAAREIVQDKE-GVDLRER---EKRRAQELEARRVKLRAALATSNAISSDK------- 850

Query: 691  IEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGD 750
                    +  I+N  ++ G+  + +   I  ++K HQ+ G+RF+W  II         +
Sbjct: 851  --------SRLIINETKQDGQSFIYVNEEIGKRIKDHQINGVRFLWNQII------VDAE 896

Query: 751  KGLGCILAHTMGLGKTFQVIAFLYTAMRSVN-------------LGLRTALIVTPVNVLH 797
               GC+LAHTMGLGKT QVI FL   + + N             L     +I+ P  ++ 
Sbjct: 897  TRQGCLLAHTMGLGKTMQVITFLVAVLEAANSHDESIRAQIPKDLRKSQTVILCPAGLVD 956

Query: 798  NWKQEFMKWRPSELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKH 856
            NW  E + W P  L    V     +  D  R  ++  W   GGV ++G+T F NL     
Sbjct: 957  NWLDEILMWSPRGLLGNVVKYESALKGDAIRLAVIKDWERNGGVLVLGHTMFWNL----- 1011

Query: 857  VKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNL 916
              D N+ R+I   L    ++++CDEAH +K+  +   +A ++ + + RIALTGSPL NN+
Sbjct: 1012 --DTNV-RQI---LTGAANLVICDEAHAMKSAESLLHRACQEFRTRSRIALTGSPLSNNV 1065

Query: 917  MEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV 976
             EYY M+++V   FLG   EFR+ +  PIE+G   +S+  D +   +   +L   +   V
Sbjct: 1066 QEYYSMINWVAPNFLGPIQEFRDIYATPIEHGLWKDSSGYDKRRALKLLEVLKMNVAPKV 1125

Query: 977  QRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQ 1036
            QR    VV+ +LP K  FVI V+ +PLQ+RLY  +L+    T +   ++K+ +   A  Q
Sbjct: 1126 QRATTQVVRHELPAKYEFVIFVEATPLQKRLYDIYLNEMASTLENAKSKKVMRVIGAS-Q 1184

Query: 1037 ALAQIWNHP-----GILQLTKDKGYPS------REDAEDSSSDENMDYNVVIGEKPRNMN 1085
             LA I NHP      +++ ++    P       ++D ED +S       V     P++M 
Sbjct: 1185 HLALICNHPRCFRQKVVEASRASAAPQPRGRGRKDDDEDGAS-------VAAAAFPQSMI 1237

Query: 1086 DFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIP 1145
              +          K+   D+ +         S K+ LLL IL     + DK LVFS SI 
Sbjct: 1238 SAV---------LKETIGDIANP------TLSRKVELLLMILDEARAVKDKVLVFSHSIL 1282

Query: 1146 TLDLIEFYLSKLPRPGKQGKLWK-KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTL 1204
            TLD +             G+L+K +G+   RLDG T  ++RQ+ ++ FN       +  L
Sbjct: 1283 TLDYL-------------GELFKQQGRAVCRLDGSTAVAKRQEQIKAFN---TGDSEIYL 1326

Query: 1205 ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEK 1264
            ISTRAG +G+N++ ANRV+I D  WNP  + QA+ RA+R+GQ K V+ Y+ +  G  EE+
Sbjct: 1327 ISTRAGGVGLNIYGANRVVIFDFRWNPVSEQQAVGRAYRFGQEKTVYVYQFVTSGAFEEQ 1386

Query: 1265 IYKRQVTKEGLAARVVDRQ 1283
            +  + V K  LA+RVVD++
Sbjct: 1387 LQNKNVFKMQLASRVVDKK 1405


>gi|328697477|ref|XP_001946013.2| PREDICTED: hypothetical protein LOC100163987 [Acyrthosiphon pisum]
          Length = 1139

 Score =  299 bits (765), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 184/543 (33%), Positives = 290/543 (53%), Gaps = 47/543 (8%)

Query: 608  SSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQV 667
            S  +SD      D+ + I G+    K IRR++   EL E T+  I  E+ R++R++  Q 
Sbjct: 633  SDEDSDKNKVSRDHIISIKGR----KNIRRLITQKELSESTQNAIEEEELRKKRIQERQ- 687

Query: 668  QFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAH 727
                  KL N +    DL      E    +    +++   +  EE V +   +   LK H
Sbjct: 688  ------KLYNEIC---DLPTPLETE----SCKKLVLDFDDKTNEELVAVHPDLVKFLKPH 734

Query: 728  QVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTA 787
            QV GI F+W+++ +S+ ++K   KG G ILAH MGLGKT Q+IA ++T  R    G++T 
Sbjct: 735  QVKGITFLWDSVFESLSRIKEH-KGNGSILAHCMGLGKTLQIIALVHTLFRYPETGIKTV 793

Query: 788  LIVTPVNVLHNWKQEFMKWRPSELKPLRVFML---EDVSRDRRAELLAKWRAKGGVFLIG 844
            LI+TP   + NW +EF KW     +    F+L   E  + + R  ++ +W+ + GV +  
Sbjct: 794  LIITPNATIENWCKEFHKWLHGIDEEKHFFVLNLAESKTYESRKNIIDEWQREHGVLIAS 853

Query: 845  YTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQR 903
            Y  +R++   K+++       I   L D GPD+++CDE H+IKN     ++++ ++K  R
Sbjct: 854  YELYRSVVNYKYIEK---FPSILEGLVDPGPDLIICDEGHVIKNHVTAVSKSINRIKTLR 910

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            RI LTG+PLQNNL EY+CMVDF+R   LGS  +F NRF NPI NGQ+++ST  DV++M  
Sbjct: 911  RIVLTGTPLQNNLKEYHCMVDFIRPNLLGSIKDFTNRFINPITNGQYSDSTPLDVELMKG 970

Query: 964  RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS 1023
            RSH+L++ L+GFVQR D +V+   LPPK  +VI +KLS  Q  LY+R+LD +        
Sbjct: 971  RSHVLHKMLEGFVQRFDYSVLTPFLPPKHEYVIYLKLSDKQIELYQRYLDSYR------- 1023

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQL----TKDKGYPSREDAEDSSSDENMDYNVVIGE 1079
                +   F  Y  L  +W HP +L +    T+ KG   ++  +D S  ++   +V   E
Sbjct: 1024 ----QPELFTNYNMLQIVWTHPKLLAVYAERTESKG-EKKQKLKDISYIDSFSNSVEEVE 1078

Query: 1080 K---PRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDK 1136
                P ++ +    K  + + +  WW   +     + +    K +++  IL  C  +GDK
Sbjct: 1079 NRHIPVSILNSSITKKPNTYLK--WWKPYVSNSDLESVYPYSKFIMMFSILQECEKIGDK 1136

Query: 1137 SLV 1139
              V
Sbjct: 1137 VYV 1139


>gi|347827210|emb|CCD42907.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 2114

 Score =  298 bits (764), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 224/724 (30%), Positives = 348/724 (48%), Gaps = 111/724 (15%)

Query: 608  SSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAE---LGEETKRKIAIEKERQERLKS 664
            S S +DSE S+ +++          KK R+  +DA    L E+ + ++  ++ER+++L++
Sbjct: 955  SVSTTDSEFSEREDD-------SPSKKKRKFFEDANARNLREQDRARVTAQEERKKQLRA 1007

Query: 665  LQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL 724
                     +L  S  + GD+           A+  +I+N  +   +  + +   I  ++
Sbjct: 1008 ---------RLRESDDV-GDV-----------ALDRHIINEGKFDDQGYIYVDEEIGKRI 1046

Query: 725  KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVN--- 781
            K HQ+ G+RF+W  I         G+   GC+LAHTMGLGKT Q I  L    ++ +   
Sbjct: 1047 KPHQLEGVRFIWNQI------TADGEATQGCLLAHTMGLGKTMQTITILVALAQAASSID 1100

Query: 782  ----------LGLRTALIVTPVNVLHNWKQEFMKWRP----SELKPLRVFMLEDVSRDRR 827
                      L +   +I+ P  ++ NW  E + W P     +L+P+      D + D  
Sbjct: 1101 ESISSQVPESLRVSKTIILCPPGLIANWVDEILTWSPDDILGDLRPV------DSASDLE 1154

Query: 828  AEL--LAKWRAKGGVFLIGYTAFRNLSFGKHVKD-----RNMAREICHA---LQDGPDIL 877
            +    +  W  +GGV LIGY  FR        K       ++ ++   A   L +GP+I+
Sbjct: 1155 SRFCTIDDWFEEGGVLLIGYDMFRRFIAPPKSKPGDPMPPSLIKKFERARTKLLEGPNIV 1214

Query: 878  VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEF 937
            V DEAH +KN  +    A  Q + + RIALTGSPL NN+ EY+ MV++V   +LG   EF
Sbjct: 1215 VADEAHKMKNYTSALNMAATQFRTKTRIALTGSPLANNVEEYHTMVEWVAPNYLGPKIEF 1274

Query: 938  RNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 997
            R +++ PIE G   +ST  +     +   IL   L   V R D +V++ DLPPK  F I 
Sbjct: 1275 RKKYKEPIEQGLFADSTRGEKFKSQKMLEILKADLSLKVHRADTSVLRDDLPPKKEFTIN 1334

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY- 1056
            V L+ LQ++ Y  +  +   ++ + S  K      +G      +W++  IL L  +  Y 
Sbjct: 1335 VSLTELQKQAYITY--VRSMSSQKPSRTK------SGELKQTTVWSYINILTLLCNHPYC 1386

Query: 1057 -PSREDAEDSSSDENMDYNVVIGE-------KPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
              ++ DA  +    N    +           KP    D    +ND   ++     DL+  
Sbjct: 1387 FKAKLDARSNELQGNSQPKIHTTTASRTRKGKPMEPQDVTDLENDPEAWKLGVSEDLISA 1446

Query: 1109 HT---------YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
                           + S K+ +L  IL     +GDK LVFSQ++ TLD +E        
Sbjct: 1447 EAKVFGSVLGKISNPELSNKVRILCQILDASRAVGDKVLVFSQTLVTLDFLEIMCR---- 1502

Query: 1160 PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
                     +G+ + RLDG+T  ++RQ LV+ FN   +  ++  LIST AG LG+NL+ A
Sbjct: 1503 --------DQGRKYARLDGKTAMNKRQALVKDFN---SNDLELYLISTTAGGLGLNLYGA 1551

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NRV+I D  +NP  + QAI RA+R GQ K VF YRLMA GT E  I  + V K  LA+RV
Sbjct: 1552 NRVVIFDFKYNPINEEQAIGRAYRIGQKKHVFVYRLMAAGTFEGSIQNKAVFKTQLASRV 1611

Query: 1280 VDRQ 1283
            VD++
Sbjct: 1612 VDKK 1615


>gi|154309786|ref|XP_001554226.1| hypothetical protein BC1G_07363 [Botryotinia fuckeliana B05.10]
          Length = 2080

 Score =  298 bits (764), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 224/724 (30%), Positives = 348/724 (48%), Gaps = 111/724 (15%)

Query: 608  SSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAE---LGEETKRKIAIEKERQERLKS 664
            S S +DSE S+ +++          KK R+  +DA    L E+ + ++  ++ER+++L++
Sbjct: 952  SVSTTDSEFSEREDD-------SPSKKKRKFFEDANARNLREQDRARVTAQEERKKQLRA 1004

Query: 665  LQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL 724
                     +L  S  + GD+           A+  +I+N  +   +  + +   I  ++
Sbjct: 1005 ---------RLRESDDV-GDV-----------ALDRHIINEGKFDDQGYIYVDEEIGKRI 1043

Query: 725  KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVN--- 781
            K HQ+ G+RF+W  I         G+   GC+LAHTMGLGKT Q I  L    ++ +   
Sbjct: 1044 KPHQLEGVRFIWNQI------TADGEATQGCLLAHTMGLGKTMQTITILVALAQAASSID 1097

Query: 782  ----------LGLRTALIVTPVNVLHNWKQEFMKWRP----SELKPLRVFMLEDVSRDRR 827
                      L +   +I+ P  ++ NW  E + W P     +L+P+      D + D  
Sbjct: 1098 ESISSQVPESLRVSKTIILCPPGLIANWVDEILTWSPDDILGDLRPV------DSASDLE 1151

Query: 828  AEL--LAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN-----MAREICHA---LQDGPDIL 877
            +    +  W  +GGV LIGY  FR        K  +     + ++   A   L +GP+I+
Sbjct: 1152 SRFCTIDDWFEEGGVLLIGYDMFRRFIAPPKSKPGDPMPPFLIKKFERARTKLLEGPNIV 1211

Query: 878  VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEF 937
            V DEAH +KN  +    A  Q + + RIALTGSPL NN+ EY+ MV++V   +LG   EF
Sbjct: 1212 VADEAHKMKNYTSALNMAATQFRTKTRIALTGSPLANNVEEYHTMVEWVAPNYLGPKIEF 1271

Query: 938  RNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 997
            R +++ PIE G   +ST  +     +   IL   L   V R D +V++ DLPPK  F I 
Sbjct: 1272 RKKYKEPIEQGLFADSTRGEKFKSQKMLEILKADLSLKVHRADTSVLRDDLPPKKEFTIN 1331

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY- 1056
            V L+ LQ++ Y  +  +   ++ + S  K      +G      +W++  IL L  +  Y 
Sbjct: 1332 VSLTELQKQAYITY--VRSMSSQKPSRTK------SGELKQTTVWSYINILTLLCNHPYC 1383

Query: 1057 -PSREDAEDSSSDENMDYNVVIGE-------KPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
              ++ DA  +    N    +           KP    D    +ND   ++     DL+  
Sbjct: 1384 FKAKLDARSNELQGNSQPKIHTTTASRTRKGKPMEPQDVTDLENDPEAWKLGVSEDLISA 1443

Query: 1109 HT---------YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
                           + S K+ +L  IL     +GDK LVFSQ++ TLD +E        
Sbjct: 1444 EAKVFGSVLGKISNPELSNKVRILCQILDASRAVGDKVLVFSQTLVTLDFLEIMCR---- 1499

Query: 1160 PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
                     +G+ + RLDG+T  ++RQ LV+ FN   +  ++  LIST AG LG+NL+ A
Sbjct: 1500 --------DQGRKYARLDGKTAMNKRQALVKDFN---SNDLELYLISTTAGGLGLNLYGA 1548

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NRV+I D  +NP  + QAI RA+R GQ K VF YRLMA GT E  I  + V K  LA+RV
Sbjct: 1549 NRVVIFDFKYNPINEEQAIGRAYRIGQKKHVFVYRLMAAGTFEGSIQNKAVFKTQLASRV 1608

Query: 1280 VDRQ 1283
            VD++
Sbjct: 1609 VDKK 1612


>gi|398394016|ref|XP_003850467.1| SNF2 family DNA-dependent ATPase domain-containing protein
            [Zymoseptoria tritici IPO323]
 gi|339470345|gb|EGP85443.1| SNF2 family DNA-dependent ATPase domain-containing protein
            [Zymoseptoria tritici IPO323]
          Length = 777

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 202/621 (32%), Positives = 313/621 (50%), Gaps = 75/621 (12%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            VN +++  +E + +   I+ ++K HQ  G++FMW    + +  V   ++  GCILAHTMG
Sbjct: 6    VNPIKDDDKEFIFVDPKIAEQMKDHQKDGVQFMW----RELTAVNDDEESQGCILAHTMG 61

Query: 763  LGKTFQVIAFLY-----------TAMRSVNLGLRT---------ALIVTPVNVLHNWKQE 802
            LGKT Q IA L            T  + +   LR           L++ PV ++ NW++E
Sbjct: 62   LGKTMQTIALLIAVNEAAFSEDPTIRQQLPPRLRPKTKKRSQLRMLVLCPVVLIQNWRRE 121

Query: 803  FMKWRPSELKPL-----RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNL------ 851
             MKW P +L  +     RV +      ++  E +  W   GGV L+GY  FR        
Sbjct: 122  LMKWAPEKLPKVYTVESRVGLSTHRQNEKHLEDMKDWYKHGGVLLMGYPLFRGKIGRKED 181

Query: 852  SFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSP 911
            +F +H  D+     +   L +G ++LV DEAH +K+ ++  + A+K++  Q RIALTG+P
Sbjct: 182  AFSEHDADK-----LDKYLVEGTELLVADEAHNLKDEKSKISAAVKRIHTQSRIALTGTP 236

Query: 912  LQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQ 971
            + N++ E Y +V F    +LG    FR +F  PI  G   +ST+  ++   ++  +L  Q
Sbjct: 237  MSNDVQEIYSLVSFAAPNYLGDPAWFRQQFAQPIREGNGRDSTTYQIRKSMKKLAVLRTQ 296

Query: 972  LKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD--LHGFTNDRVSNEKIRK 1029
            ++  V R D+ V++  L  KT FVIT+ L  +Q+  Y ++L   + G  N++ S   +  
Sbjct: 297  IEPKVNRADITVLRGSLKSKTEFVITLPLLGIQQAAYVKYLKALVGGGKNEKASQVMM-- 354

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
              FA    L  + NHP  L   +    P+   A  S      D   V      +++  ++
Sbjct: 355  --FAWLSVLTLLCNHP--LAFKRKLNAPASYKASKSKKAVRSDVEAV----DEDLSKSVR 406

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELD--YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
                D    KD   D+       +LD   S KM  L+ IL M  + GDK LVF+ SIPTL
Sbjct: 407  TLGFDEATIKDITADI-----SDDLDTVLSAKMTTLISILEMSRDCGDKVLVFTTSIPTL 461

Query: 1148 DLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT-ESSERQKLVERFNEPLNKRVKCTLIS 1206
            D +E  L            W +G    R+DG+    + RQ +++ F +         LIS
Sbjct: 462  DYVEEALE-----------W-EGISTARIDGKVLPVARRQTIIDNFQK---DSTTALLIS 506

Query: 1207 TRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIY 1266
            TRAG +G+++  ANRV+I+D  +NP ++ QA+ RA+R GQTKPVF YRL+  GT E+ I 
Sbjct: 507  TRAGGVGLDIQGANRVVILDFGFNPAHEEQAVGRAYRLGQTKPVFVYRLVVGGTFEDMIQ 566

Query: 1267 KRQVTKEGLAARVVDRQQVHR 1287
              Q+ K  L  RVVD++   R
Sbjct: 567  NMQLFKTSLTQRVVDKKNPTR 587


>gi|530788|gb|AAA20872.1| X-linked nuclear protein [Homo sapiens]
 gi|1588601|prf||2209217A ATR-X gene
          Length = 1298

 Score =  297 bits (761), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 178/453 (39%), Positives = 261/453 (57%), Gaps = 42/453 (9%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +KKIR+IL D +L  ET+  +  E+ ++ R +  +       KL   + ++       
Sbjct: 355  KGRKKIRKILKDDKLRTETQNALKEEERKERRKRVRE---RETEKLREVIEIEDASPTKC 411

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
             I       T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K  
Sbjct: 412  PI------TTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS 465

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVL-HNWKQEFMKWRP 808
              G GCILAH MGLGKT QV++FL+T +    L   TAL+    ++L  NW  EF KW+ 
Sbjct: 466  -PGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVGLSSSILAFNWMNEFEKWQE 524

Query: 809  S--ELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE 865
               + + L V  L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +   
Sbjct: 525  GLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEI 584

Query: 866  ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
               AL D GPD +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+
Sbjct: 585  FNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVN 644

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F++E  LGS  EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQR D   +
Sbjct: 645  FIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTAL 704

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
             K LPPK  +V+ V+++ +Q +LY                       F  +Q L++IW H
Sbjct: 705  TKFLPPKHEYVLAVRMTSIQCKLYA------------------GAKLFQDFQMLSRIWTH 746

Query: 1045 PGILQL----TKDKGYPSREDAED----SSSDE 1069
            P  LQL     ++KGY   ED+ D    S SDE
Sbjct: 747  PWCLQLDYISKENKGYFD-EDSMDEFIASDSDE 778



 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 145/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLS---- 1155
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L     
Sbjct: 861  DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELADK 920

Query: 1156 ------KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
                    P   K    W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 921  SREKTEDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 980

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 981  GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 1040

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 1041 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 1079


>gi|378733751|gb|EHY60210.1| RAD54-like protein 2 [Exophiala dermatitidis NIH/UT8656]
          Length = 1888

 Score =  297 bits (760), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 211/653 (32%), Positives = 324/653 (49%), Gaps = 96/653 (14%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  + +   IS ++K HQ+ GI+FMW  II+         K  GCILAHTMGLGKT QVI
Sbjct: 1056 EPYIYLHPEISKRIKPHQLAGIQFMWREIIED-------PKHQGCILAHTMGLGKTMQVI 1108

Query: 771  AFLYT----------AMRS-VNLGLRTA--LIVTPVNVLHNWKQEFMKWRPSELKPL--R 815
            + L T           +R  +   LRT+  L++ P +++ NW  E   W P +   +  R
Sbjct: 1109 SLLVTISLCSQDSDPKVRDLIPAPLRTSRTLVLCPASLVENWLDELALWTPRDNPDILGR 1168

Query: 816  VFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNL---SFGKHVKDRNMAREICHALQD 872
            V  L   S D     L +W   GGV +  Y  FR +      +  K    + ++   L +
Sbjct: 1169 VHHLH--SSD--PWTLRQWSKNGGVLVTSYERFRRMITTMTTQKAKGNAPSIDVEKILLE 1224

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
             P ++V DEAH +KN  +      K+ K   RIALTGSPL N+L EY+ MVD++  G+LG
Sbjct: 1225 YPTLVVADEAHKLKNPGSILNSLAKRFKTTSRIALTGSPLNNHLEEYFTMVDWIAPGYLG 1284

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            +   FR+++  PI  G +++ST  + ++  ++ H+L   L   + R D++ + KD+P KT
Sbjct: 1285 TIVNFRSKYSEPINEGLYSDSTPFERRLCLRKLHVLKRDLDPKIDRADISAIAKDMPTKT 1344

Query: 993  VFVITVKLSPLQRRLY----KRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
             F ITV L+ LQ R+Y    K  L+ +   N R  N  I    +     L+ + +HP   
Sbjct: 1345 EFFITVPLTELQTRVYNIYVKYMLETYRLHNSRTLNATI----WDWISMLSWLCHHPSCF 1400

Query: 1049 ------QLTKDKGY-----------PSREDAED--SSSDENMDYNVV---------IGEK 1080
                  ++ K KG+             + D+ D  +S+DE  D             I   
Sbjct: 1401 LVKLKERIEKQKGHLIEKQKEERLEKQKADSRDLTTSTDEGGDAAAAAAAPATQEDIAAP 1460

Query: 1081 PRNMNDFLQGKNDD--GFFQKDWWNDLLHEHTYKELDYSG---------KMVLLLDILTM 1129
            P  + +  Q   +       ++ +  L      +E+D  G         +  ++  IL  
Sbjct: 1461 PETLKEDTQLDTEGPLAVAMREVFEIL------EEVDKPGLIDDPSLSYRTYVVQQILKE 1514

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
             +  GDK+L+F+ S+PTL+ +E  L+ +  P            ++RLDG T  S+RQ   
Sbjct: 1515 ANANGDKTLLFTHSLPTLNYLERMLNDMQYP------------YFRLDGSTAVSKRQNST 1562

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            + FN+  + +V   LIS +AG LG+NL  ANRVII D S+NP+++ QAI RA+R GQT P
Sbjct: 1563 KAFNKKDDSQV--FLISMKAGGLGLNLQGANRVIIFDFSFNPSWEEQAIGRAFRLGQTAP 1620

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGD 1302
            V+ YR  + GT E+ ++ + V K  L  RVVD++   R  +K  M +LF   D
Sbjct: 1621 VYVYRFQSGGTYEDILFNKAVFKTQLFGRVVDKKNPKRQATKSRMAYLFPVKD 1673


>gi|452840966|gb|EME42903.1| hypothetical protein DOTSEDRAFT_115246, partial [Dothistroma
            septosporum NZE10]
          Length = 731

 Score =  296 bits (759), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 208/694 (29%), Positives = 338/694 (48%), Gaps = 110/694 (15%)

Query: 657  ERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRI 716
            +R ER K+ + Q S+  +L+  V  D   S                +N V+ + +E++ +
Sbjct: 26   KRMERFKTHKAQASNSQQLVAMVQRDPTNSK-------------IPINSVKSEDDESIYV 72

Query: 717  PSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKG----LGCILAHTMGLGKTFQVIAF 772
               I+  +K HQ+ G++FMW       R++ + D G     GC+L HTMGLGKT Q IA 
Sbjct: 73   HQRIAQVMKGHQIDGVQFMW-------REITADDGGDTSPQGCLLTHTMGLGKTMQTIAV 125

Query: 773  LYT---AMRSVNLGLRTAL-----------------IVTPVNVLHNWKQEFMKWRPSELK 812
            L     A +S NL +   L                 ++ P  ++ NWK+E  KW    L 
Sbjct: 126  LVAVNEAAQSQNLKVSRQLPPQLRLNAERERQLRMMVLCPPALMENWKKEIKKWAGDRLP 185

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD--RNMAR-----E 865
               VF +E        + +  W   GGV +IGY  FRN    K  K+   N+A      E
Sbjct: 186  --NVFCIESGPNKNHLDDMQHWYRIGGVLVIGYELFRNKVHRKESKNAKTNLANNQDGDE 243

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            I   L  GP+++V DE H ++N  A +  A++ +  Q RI L+G+PL NN+ E Y ++ F
Sbjct: 244  IDRCLLRGPELVVADEVHNLRNRNARSI-AVEGMVTQSRIGLSGTPLSNNVDEIYALITF 302

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            V  G+LG   EFR  +  PI+ G + +STS + +   ++  +L  +++  V R D++ ++
Sbjct: 303  VSPGYLGEPKEFRAHYAEPIQQGLYDDSTSYEKRRSLKKLKVLQNRIEPKVNRADIDSLR 362

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
              +PPKT FV+T+ L+ +Q+R Y RF+       D+ + +  +   FA    L  +  HP
Sbjct: 363  GFIPPKTEFVLTLPLTSVQQRAYGRFVS--AVLGDKQNEKASQVQIFAWLDILGLLTTHP 420

Query: 1046 GILQ-------LTKDKGYPSREDAEDSS-------------SDENMDYNVVIGEKPRNMN 1085
               +       + K +G  +      +S             +DE +   + +G     ++
Sbjct: 421  LAFKNKLQKPVVKKIRGRATTPQGGTASDDGGVDVDDTVDLADEAV---LALGFSQETVD 477

Query: 1086 DFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIP 1145
            + + G  D+                  ++ +S KM +L++IL + +   DK LVFS S+ 
Sbjct: 478  EIVDGITDE-----------------LDVQHSAKMSMLVNILELSATCDDKVLVFSGSLG 520

Query: 1146 TLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
            TLD ++  L+             +G    R+DG+     R +L+  F++  +K +   L 
Sbjct: 521  TLDTVQQILAD------------RGMKCGRIDGKVPPPRRLQLIAEFDK--SKSMNVLLC 566

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            STRA  +G+N+  ANRV+I+D  +NPT++ QA+ RA+R GQ KPVF YR++   T E+ I
Sbjct: 567  STRASGVGLNIQGANRVVILDFGFNPTHEEQAVGRAYRLGQKKPVFVYRMVMGSTFEQHI 626

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFE 1299
            Y +Q+ K+ L  RVVDR+   R   K     LFE
Sbjct: 627  YNKQLFKQSLFQRVVDRKNPRRVAKKNTREFLFE 660


>gi|350290927|gb|EGZ72141.1| hypothetical protein NEUTE2DRAFT_90105 [Neurospora tetrasperma FGSC
            2509]
          Length = 1919

 Score =  296 bits (758), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 231/769 (30%), Positives = 366/769 (47%), Gaps = 114/769 (14%)

Query: 554  TLFCTTCVKRNISEACLSD--EVQASC---WQCCCCSPSLLKRLTSELGRAMGSENLIVS 608
            TL C TC K N       +  E   +C   ++    SP+ ++  ++E   A     + ++
Sbjct: 807  TLRCVTCQKLNREYLRFGEFFEFLQNCIRYFRSEPKSPTPMEMTSAESPEATQDIPMDIT 866

Query: 609  SSESDSENSDAD----------NNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKER 658
            S   +SE+ D D          ++ K G + K  +K +++  D++         A+ K+ 
Sbjct: 867  S---ESEHMDTDLEELSSQFPLSSAKKGRRPKHDEKAKKLRVDSK---------ALLKQM 914

Query: 659  QERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGE-EAVRIP 717
             ER K L      ++KL  + ++  D S               I+N  +E  +   + + 
Sbjct: 915  DERRKLL------RAKLAETGSVPSDKSR-------------LIINETKESDDLPLIYVH 955

Query: 718  SSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY--- 774
              I  ++K HQ+ G+RFMW+ I+     V S  +  GC+LAHTMGLGKT QVI  L    
Sbjct: 956  EEIGGRIKDHQIDGVRFMWDQIV-----VDSNSRQ-GCLLAHTMGLGKTMQVITLLVAIA 1009

Query: 775  ----------TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRVFMLEDVS 823
                       A    +L +   LI+ P  ++ NW  E  KW P + L  +       V 
Sbjct: 1010 EASQSDDPRVVAQIPKDLRVGRPLILCPSGLVENWIDEICKWAPKDILGNITKIDAATVP 1069

Query: 824  RDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAH 883
               R  L+  W    GV ++GY  FR+L  GK   + N+A E+ H+    P I++CDEAH
Sbjct: 1070 PSERVLLIKGWARSRGVLVMGYELFRSLVSGK---EDNVA-ELLHS---SPSIVICDEAH 1122

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
              KN  +     ++      RIA TGSPL  N+M+YY M+++V   +L    EF  ++  
Sbjct: 1123 RFKNKTSKLYAVVQDFHTMSRIATTGSPLTRNVMDYYSMINWVAPNYLSDVGEFNQKYAE 1182

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            PI  G H +ST    K+  +R  IL   +   V R D+ V+  +LP K  F++T++++ +
Sbjct: 1183 PISAGLHADSTDAQKKLARERLQILKAIVAPKVNRKDIQVLVDELPQKREFILTIQMTKV 1242

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA-LAQIWNHPGILQLTKDKGYPSREDA 1062
            QR  Y+ +L+          N+  R +   G  A L  +  HP I +             
Sbjct: 1243 QRDAYREYLET---AQRNKGNDLYRTACVWGLIASLKLLLAHPKIFK------------- 1286

Query: 1063 EDSSSDENMDYNVVIG---EKPRNMNDFLQGKNDDGF-FQKDWWNDLLHEHTYKELD--- 1115
              S  +E +  N  +    ++  N  D    +ND+     +D   ++L + + + +D   
Sbjct: 1287 --SKMEERLSSNPALAKGKQRITNDEDPDSDENDEPLDLSRDTLRNVLAKVSIRGIDDIV 1344

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            +S K+ +LL IL  C  +GDK LVFSQSIPTL+ ++          KQ K+     ++ R
Sbjct: 1345 HSTKVTVLLQILKECKQIGDKVLVFSQSIPTLNFLQDLF-------KQKKI-----NYKR 1392

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ  V+ FN      +   LISTRAG +G+N+  ANRV++ D  + P  + 
Sbjct: 1393 LDGKTPVSQRQAAVKEFNA--VDSLDVYLISTRAGGVGLNIPGANRVVLFDFGFTPAEEQ 1450

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
            QA+ RA+R GQ K VF Y L   GT E  I+   + K  L+ RVVD+++
Sbjct: 1451 QAVGRAYRIGQEKKVFVYHLKVGGTYETAIHNLAIFKRQLSERVVDKKK 1499


>gi|330803641|ref|XP_003289812.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum]
 gi|325080071|gb|EGC33642.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum]
          Length = 731

 Score =  296 bits (757), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 186/582 (31%), Positives = 302/582 (51%), Gaps = 82/582 (14%)

Query: 708  EKGEEAVRI--PSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL-GCILAHTMGLG 764
            +KG + V +     IS  L+ HQ  G++F+++ +  +     + ++G  G ILA  MGLG
Sbjct: 29   DKGNKVVHVIVDPHISQHLRPHQRRGVKFLYDCVTGT-----NNEEGYTGAILADQMGLG 83

Query: 765  KTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            KT Q +A ++T ++    G   ++ A+IVTP  +++NWK+E  KW   + + +   + + 
Sbjct: 84   KTLQTLALVWTLLKQSPTGKSTIKKAIIVTPSTLVNNWKKEIQKWFGLD-RLIATTLTDS 142

Query: 822  VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 881
            +S++ +  L     +   V +I Y   R  S            +I   +  G  +LVCDE
Sbjct: 143  LSKETKTNLDNFNTSIKPVLIISYEQCRIFS------------KILETMSCG--LLVCDE 188

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
            AH +KN+ + TTQA+  VK +R+I LTG+P+QN+L+E+Y MVDF   G LGS   F+  F
Sbjct: 189  AHRLKNSNSKTTQAINSVKAERKILLTGTPIQNDLVEFYSMVDFCNPGSLGSLASFKKNF 248

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
             NPI   + +    +D++   ++S  L +  K F+ R   N+++K LPPK V V+  +LS
Sbjct: 249  INPINKSRESTGNPKDIENGTKKSIELSKLTKSFILRRKSNILEKYLPPKRVQVVFCRLS 308

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            PLQ+ LYK  L+ +      ++ ++   S  +    L ++ N P +LQ T D+       
Sbjct: 309  PLQQDLYKSVLNSNS-VQSLINGKESPASSLSTITLLKKLCNSPSLLQDTSDQ------- 360

Query: 1062 AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 1121
             E  S  +   YN+   E                                   + +GK++
Sbjct: 361  -ELQSIFKQYSYNMESME-----------------------------------NEAGKLL 384

Query: 1122 LLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
             +  ++    ++G+K ++ S    TLD+ E    KL              D+ RLDG   
Sbjct: 385  FVESLIKQLKSVGEKLVLVSNYTQTLDVFERLCKKL------------STDFLRLDGSVS 432

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
            S  RQ LV++FN+  NK+ +  L+S +AG +GINL   N +++ D  WNP  D+QA+ R 
Sbjct: 433  SDTRQSLVDKFNDQSNKKYQIFLLSAKAGGVGINLIGGNHLVLYDPDWNPAIDIQAMERV 492

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            WR GQ KPVF YRL + GT+EEKIY+RQ+ KE ++  +VD++
Sbjct: 493  WREGQNKPVFIYRLFSTGTIEEKIYQRQLMKESISNSIVDKK 534


>gi|170588595|ref|XP_001899059.1| SNF2 family N-terminal domain containing protein [Brugia malayi]
 gi|158593272|gb|EDP31867.1| SNF2 family N-terminal domain containing protein [Brugia malayi]
          Length = 1207

 Score =  295 bits (756), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 164/378 (43%), Positives = 218/378 (57%), Gaps = 36/378 (9%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN  +   E  V +P  ++  L+ HQ+ GIRFM+ NII+S ++ +    G GCILAH M
Sbjct: 223  LVNPGKATDEADVYVPFHLNDVLQPHQLGGIRFMYGNIIESAKEYEKS-AGFGCILAHAM 281

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE-------LKPL 814
            GLGKT Q+IAF    +R+ N   +  LI+ PVN + NW  EF KW P+        ++P 
Sbjct: 282  GLGKTIQIIAFTDIFVRTTNA--KKILIIVPVNTILNWYSEFEKWLPNRANEAGENIRPF 339

Query: 815  RVFMLEDV--SRDRRAELLAKWRAKGGVFLIGYTAFR---NLSFGKHVKDRNM------- 862
             V++L D   + ++RAEL+ KW  +GGV LIGY  FR    +   K V  R         
Sbjct: 340  VVWLLGDAVKTNEQRAELIQKWHTEGGVLLIGYDMFRLLVQIKPKKRVTGRPNKKTEEIV 399

Query: 863  --------AREICHA----LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGS 910
                    A  +C A    L  GPD++VCDE H IKN R     AL  +K +RRI LTG 
Sbjct: 400  DLEKEELDAMALCAAREALLDPGPDLVVCDEGHRIKNERTGIAAALSAIKTRRRIVLTGY 459

Query: 911  PLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYE 970
            PLQNNLMEYYCMVDFVR  +LGS  EF   F+ PI+NG   +ST  D+KI  QR+H+L E
Sbjct: 460  PLQNNLMEYYCMVDFVRPHYLGSKKEFSVMFEKPIKNGLCIDSTPSDLKIGRQRTHVLIE 519

Query: 971  QLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS 1030
             LKGFVQR   +++K  LPP + FVI ++ SP+QR LY+ FL  +      VS   +   
Sbjct: 520  LLKGFVQRRTHHLLKNTLPPSSEFVILLRKSPVQRMLYRAFLQ-YAQNEISVSGTAVFNP 578

Query: 1031 FFAGYQALAQIWNHPGIL 1048
              A +   ++IWNHP IL
Sbjct: 579  LKA-FAVCSKIWNHPDIL 595



 Score =  173 bits (439), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/277 (40%), Positives = 155/277 (55%), Gaps = 13/277 (4%)

Query: 1085 NDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSI 1144
            N  L+  N D   + DW    LH +    L+   KMV+ L I+      G+K L+FSQS+
Sbjct: 762  NALLEELNLDKGIKYDWATFALHGYKPGVLENGYKMVVSLAIIEQAVLNGEKVLLFSQSL 821

Query: 1145 PTLDLIEFYL--SKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKC 1202
             TL+ IE +L  S     G +   WKK  ++YR DG T ++ER+KL+ RFN+  N  +  
Sbjct: 822  LTLNQIERFLETSSSVTVGNEKLRWKKSINYYRFDGSTTATEREKLINRFNQDPN--ILL 879

Query: 1203 TLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTME 1262
             LISTRAGSLGINL SA+RVII D SWNP +D QA+ R +RYGQ +  + YRL+   +ME
Sbjct: 880  FLISTRAGSLGINLVSASRVIIFDASWNPCHDAQAVCRIYRYGQKRRTYVYRLIMDNSME 939

Query: 1263 EKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQ 1322
              I+ RQ+ K GL  RVVD +Q+   I+K EM  L  +  DE+ D    V+ E    ++ 
Sbjct: 940  RAIFSRQIGKNGLQQRVVDDKQMDIDITKREMEQLLVY--DESLD----VATEEWNITTW 993

Query: 1323 NTNCALKHKLPLSHEGCSDK---LMESLLGKHHPRCA 1356
              + AL     LSH     +   L ESLL +   R +
Sbjct: 994  QIDDALLWMTALSHSKMFSQIPFLHESLLMEREDRLS 1030


>gi|195028444|ref|XP_001987086.1| GH20163 [Drosophila grimshawi]
 gi|193903086|gb|EDW01953.1| GH20163 [Drosophila grimshawi]
          Length = 1645

 Score =  295 bits (754), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 151/376 (40%), Positives = 224/376 (59%), Gaps = 43/376 (11%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN+   +GEE + +   I+  +K HQ+ G+RF+++NII+S R+      G GCILAH+M
Sbjct: 398  VVNIAHPEGEETLYLAPQIAKVIKPHQIGGVRFLYDNIIESTRRFNKS-SGFGCILAHSM 456

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE-----LKP--L 814
            GLGKT QV++F    +R  +   +T L V P+N L NW  EF  W P +     ++P   
Sbjct: 457  GLGKTLQVVSFCDIFLR--HTSAKTVLCVMPINTLQNWLSEFNMWIPRQTGDMNVRPRNF 514

Query: 815  RVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSF---------GKHVKD---- 859
             +F+L D  ++   RA+++  W  KGGV LIGY  FR L+          GK+  +    
Sbjct: 515  DIFVLNDQQKNLTARAKVILNWVHKGGVLLIGYELFRLLALKLVTTRKKKGKNSYNDAMD 574

Query: 860  --RNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNL 916
              +++   +  AL + GPD+++CDE H IKN+ A  + ALKQ++ +RRI LTG PLQNNL
Sbjct: 575  SSKDLMNLVFEALVKPGPDLVICDEGHRIKNSHAGISLALKQIRTRRRIVLTGYPLQNNL 634

Query: 917  MEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV 976
            +EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R+H+L+  L GFV
Sbjct: 635  LEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLGFV 694

Query: 977  QRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA--- 1033
            QR    V++  LP K  +VI V+++P QR+LY  F+            + +RK  F    
Sbjct: 695  QRRSHTVLQCTLPQKLEYVILVRMTPFQRKLYDTFM-----------TDVVRKKAFPNPL 743

Query: 1034 -GYQALAQIWNHPGIL 1048
              +    +IWNHP +L
Sbjct: 744  KAFAVCCKIWNHPDVL 759



 Score =  174 bits (442), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/218 (42%), Positives = 130/218 (59%), Gaps = 12/218 (5%)

Query: 1080 KPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLV 1139
            KP+ +ND          F   W  D++  +   ++  S KM +   I+     MGD+ L+
Sbjct: 952  KPKKINDE---------FSCSWALDIMKNYVPGQISTSPKMEIFFCIMKESIFMGDRILL 1002

Query: 1140 FSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKR 1199
            FSQS+ TL+LIE +L     P      W +   ++RLDG T S ER++LV  FN   N+ 
Sbjct: 1003 FSQSLLTLNLIEGFLKSSFVPCTTN-FWMRNVSYFRLDGSTSSQERERLVNEFNA--NRN 1059

Query: 1200 VKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHG 1259
            +K  LISTRAGSLGINL  ANRVII D SWNP +D QA+YR +RYGQTK  + YR++   
Sbjct: 1060 IKLFLISTRAGSLGINLTGANRVIIFDASWNPCHDTQAVYRIYRYGQTKQCYVYRIVMDK 1119

Query: 1260 TMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
             +E+KIY RQ+ K+G++ R+VD       +S +E+ +L
Sbjct: 1120 CLEKKIYDRQIKKQGMSDRIVDECNPEAHLSMKEITNL 1157


>gi|240274020|gb|EER37538.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H143]
          Length = 1762

 Score =  295 bits (754), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 197/599 (32%), Positives = 304/599 (50%), Gaps = 75/599 (12%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            I A++K HQ+ GI+FM   ++       S D  +   +   +   +T             
Sbjct: 935  IGARVKPHQLNGIQFMISLLVTIANAAASDDPRVRNQIPKALRRSRT------------- 981

Query: 780  VNLGLRTALIVTPVNVLHNWKQEFMKWRPSE------LKPLRVFMLEDVSRDRRAELLAK 833
                    L++ P +++ NW +E + W PS+      + P R  +L  +  + R + +A 
Sbjct: 982  --------LVLCPSSLIENWWEELLMWTPSDSQTNRNIGPFRK-ILPTLQLEERLDGIAS 1032

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVK------DRNMAREICHALQDGPDILVCDEAHMIKN 887
            W   GG+ L+ Y  FR L   K  K      DR     +   L +GP I+V DEAH +KN
Sbjct: 1033 WYMDGGILLMSYDIFRALILNKATKIRPSALDRKTHETVRKHLLEGPRIIVADEAHKLKN 1092

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
              A   +A ++   + RIALTGSPL NNL EYY M+D++  G+LG   +F+ ++  PI+ 
Sbjct: 1093 RNAGVAEACREFTSKSRIALTGSPLANNLSEYYAMIDWIAPGYLGDFIQFKAKYIEPIQE 1152

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            G + +S+  + +   ++  +L + +   + R D++V+K  LPPK  FVITV L+PLQ + 
Sbjct: 1153 GLYADSSQWERRQSLKKLQVLKKDIDPKLNRADISVLKGSLPPKVEFVITVPLTPLQEQA 1212

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-ILQLTKD--KGY---PSRED 1061
            Y  ++      ND V N K+    +     L+ + NHPG  ++  +D  KG+   PS   
Sbjct: 1213 YNTYVAALAANNDNVGNPKL----WDWLSILSLLCNHPGCFMEKLRDRSKGFQKPPSSRV 1268

Query: 1062 AEDSSSDENMDYNVVIGEKPRNM--NDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
            + DS S+   D ++     P+ +  ++ L     D     D W+          L+ S +
Sbjct: 1269 SPDSDSEIPEDPSI-----PQVLLSSEVLARIEKDFPTGMDMWS----------LELSHR 1313

Query: 1120 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
              +   I+      GDK L+FS SIPTL+ +E  L       KQ K     + + RLDG+
Sbjct: 1314 AQVADQIIERSIAAGDKVLLFSHSIPTLNYLELVL-------KQAK-----RSYSRLDGK 1361

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
            T  + RQ   + FN   + +V   LISTRAG LG+N+  ANRVII D  +NPT++ QA+ 
Sbjct: 1362 TPIATRQIATKNFNSGFDSQV--YLISTRAGGLGLNIPGANRVIIFDFQFNPTWEEQAVG 1419

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLF 1298
            RA+R GQ KPV+ YR +A GT E+ ++ R V K  LA RVVD++   R  SK    +LF
Sbjct: 1420 RAYRLGQLKPVYVYRFLAGGTYEDVMHNRAVFKTQLAFRVVDKKNPIRWASKNISDYLF 1478


>gi|312072073|ref|XP_003138899.1| hypothetical protein LOAG_03314 [Loa loa]
 gi|307765938|gb|EFO25172.1| hypothetical protein LOAG_03314 [Loa loa]
          Length = 1156

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 164/378 (43%), Positives = 218/378 (57%), Gaps = 36/378 (9%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN  +   E  V +P  ++  L+ HQ+ GIRFM+ N+I+S  K      G GCILAH M
Sbjct: 203  LVNPGKASDEPDVYVPFHLNDVLQPHQLGGIRFMYGNVIES-SKDYGKSPGFGCILAHAM 261

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS-------ELKPL 814
            GLGKT Q+IAF    +R+ N   +  LI+ PVN + NW  EF KW P+        ++P 
Sbjct: 262  GLGKTIQIIAFTDIFVRTTNA--KKILIIVPVNTIQNWYSEFEKWLPNIVNEAGENIRPF 319

Query: 815  RVFMLEDV--SRDRRAELLAKWRAKGGVFLIGYTAFR---NLSFGKHVKDR--------- 860
             V++L D   + ++RAEL+ KW  +GGV LIGY  FR    +   K V  R         
Sbjct: 320  VVWLLNDAVKTNEQRAELIQKWHTEGGVLLIGYDMFRVLVQIKPKKRVTGRPNKKIEEIV 379

Query: 861  NMARE------ICHA----LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGS 910
            ++ +E      +C A    L  GPD++VCDE H IKN R     AL  +K +RRI LTG 
Sbjct: 380  DLEKEELDAIALCAAREALLDPGPDLVVCDEGHRIKNERTGIAAALSAIKTRRRIVLTGY 439

Query: 911  PLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYE 970
            PLQNNLMEYYCMVDFVR  +LGS  EF   F+ PI+NG   +ST  D+KI  QR+HIL E
Sbjct: 440  PLQNNLMEYYCMVDFVRPHYLGSKKEFSVMFEKPIKNGLCIDSTPSDLKIARQRTHILVE 499

Query: 971  QLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS 1030
             LKGFVQR   +++K  LPP   FV+ ++ SP+QR LY+ FL  +      VS   +   
Sbjct: 500  LLKGFVQRRTHHLLKNILPPSYEFVVLLRKSPIQRMLYRAFLQ-YAQNEISVSGTAVFNP 558

Query: 1031 FFAGYQALAQIWNHPGIL 1048
              A +   ++IWNHP IL
Sbjct: 559  LKA-FAVCSKIWNHPDIL 575



 Score =  168 bits (426), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/277 (39%), Positives = 153/277 (55%), Gaps = 13/277 (4%)

Query: 1085 NDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSI 1144
            N  L+  N D   + DW    LH +    L+   KMV+ L I+      G+K L+FSQS+
Sbjct: 711  NALLEELNLDRGIKYDWATFALHGYKPGILENGYKMVVSLAIIEQAVMNGEKVLLFSQSL 770

Query: 1145 PTLDLIEFYL--SKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKC 1202
             TL+ IE +L  S     G +   WK+  ++YR DG T ++ER++L+ RFN   N  +  
Sbjct: 771  LTLNQIERFLETSSSVTVGNEKLHWKRNTNYYRFDGSTTATERERLISRFNRDHN--IFL 828

Query: 1203 TLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTME 1262
             LISTRAGSLGINL SA+RVII D SWNP +D QA+ R +RYGQ +  + YRL+   +ME
Sbjct: 829  FLISTRAGSLGINLVSASRVIIFDASWNPCHDAQAVCRIYRYGQKRRTYVYRLITDNSME 888

Query: 1263 EKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQ 1322
              I+ RQ+ K GL  RVVD +Q+   I+K E+  L  +  DE  D    V+ E    ++ 
Sbjct: 889  RAIFSRQIGKNGLQQRVVDDKQMDIDITKRELEQLLVY--DEALD----VAAEEWNITTW 942

Query: 1323 NTNCALKHKLPLSHEGCSDK---LMESLLGKHHPRCA 1356
              + AL     LSH     +   L ESLL +   R +
Sbjct: 943  QIDDALLWMTALSHSKMFSQIPFLHESLLMEREDRLS 979


>gi|255956043|ref|XP_002568774.1| Pc21g17780 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590485|emb|CAP96675.1| Pc21g17780 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1331

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 204/614 (33%), Positives = 317/614 (51%), Gaps = 79/614 (12%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT---A 776
            I+  ++ HQ+ GI+FM+ NI++     KSG    GC+L+HTMGLGKT QVI+ L T   A
Sbjct: 686  IAQYVQTHQLSGIQFMFRNIVED----KSGQ---GCLLSHTMGLGKTMQVISLLVTISNA 738

Query: 777  MRSVNLGLR----------TALIVTPVNVLHNWKQEFMKWRPSE--LKPLRVFMLEDVSR 824
             +S +  +             LI+ P +++ NW+ +F  W P    L  +R    +  + 
Sbjct: 739  GQSPDPAIHGQIPEELRQSKTLILCPASLIQNWRDQFAMWSPPNHNLGKIRSIPAKKPTL 798

Query: 825  DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD-----RNMAREICHALQDGPDILVC 879
            DR  E+   W  +GG+ ++ Y  FR L+     KD     R++   +   + + P ++V 
Sbjct: 799  DRNEEICG-WNDEGGILILSYNIFRMLTKDNVGKDNDQGQRSVNESVKSLVLNSPTLVVV 857

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DEA  ++N  +   +A  +++ ++RIALTG+P+ N L +YY MV++V    LGS  +F+ 
Sbjct: 858  DEAQGLRNQGSQIAEAASRLRTRKRIALTGTPISNGLEDYYWMVNWVAPQLLGSFEKFKE 917

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
             F  PIENG    S  ED +       +     +   QRMDM+V+  DLPPK  F +  +
Sbjct: 918  DFIEPIENGSQIESKREDRRKALLCQAMFLSLTESKAQRMDMSVLGVDLPPKYEFSVYFE 977

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIW--------NHPGIL--Q 1049
            L+ LQ+ LY  F          V    +RK   AG       W        NHP I   +
Sbjct: 978  LTSLQKSLYNIF----------VQGVALRKE--AGVAPRLMSWLPLLKLCCNHPAIFKAE 1025

Query: 1050 LTKDKGYPSREDAEDSSSD---ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 1106
            L   K   S  + +D SSD    N+  NV +    +N+   +  +  D F  K+  + L 
Sbjct: 1026 LESRKSKNSTGEQKDPSSDGPGANLGSNVPVE---KNITKSMLPELHDAF--KEAPDSL- 1079

Query: 1107 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1166
                  +   S ++++L +I+     +GDK LVFS SIPTL+    YL+++        +
Sbjct: 1080 ------DPSLSSRVMILNEIINQAIAVGDKILVFSSSIPTLN----YLAQV--------M 1121

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
             K  + +  L+G   +++R +LV  FN   +      LIST+AG +G+N+ +ANRV+I D
Sbjct: 1122 EKTQRKYALLEGTIPTTKRLELVRGFNN--DPSTYVFLISTKAGGVGLNIQTANRVVIFD 1179

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 1286
              +NPT++ QAI RA+R GQ K VF YRL+A GT+EEKI+ +   K  LA R++D + V 
Sbjct: 1180 FEFNPTWEEQAIGRAYRIGQKKKVFVYRLVAAGTVEEKIFCKATFKSQLAGRLLDDEHVA 1239

Query: 1287 RTISKEEMLHLFEF 1300
            R  SK E  +L  +
Sbjct: 1240 RMGSKAEEKYLVPW 1253


>gi|195430908|ref|XP_002063490.1| GK21938 [Drosophila willistoni]
 gi|194159575|gb|EDW74476.1| GK21938 [Drosophila willistoni]
          Length = 1564

 Score =  293 bits (750), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 152/378 (40%), Positives = 221/378 (58%), Gaps = 45/378 (11%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN+   +GEE + +   IS  +K HQ+ G+RF+++NII+S R+  S   G GCILAH+M
Sbjct: 301  VVNMAHPEGEETIYLAPQISKVIKPHQIGGVRFLYDNIIESTRRF-SKSSGFGCILAHSM 359

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE-----LKP--L 814
            GLGKT QV++F    +R  +   +T L V P+N L NW  EF  W P +     ++P   
Sbjct: 360  GLGKTLQVVSFCDIFLR--HTSAKTVLCVMPINTLQNWLSEFNMWVPRQSADENIRPRNF 417

Query: 815  RVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSF------------GKHVKD- 859
             +F+L D  +    RA+++  W  +GGV LIGY  FR L+               H  D 
Sbjct: 418  DIFVLNDQQKTLTARAKVILNWVHEGGVLLIGYELFRLLALKLATTRKRKVNKNPHRVDG 477

Query: 860  ----RNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN 914
                 N+   +  AL + GPD+++CDE H IKN+ A  + ALKQ++ +RRI LTG PLQN
Sbjct: 478  YDSSTNLMNMVFEALVKPGPDLVICDEGHRIKNSHAGISLALKQIRTRRRIVLTGYPLQN 537

Query: 915  NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG 974
            NL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R+H+L+  L G
Sbjct: 538  NLLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLG 597

Query: 975  FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA- 1033
            FVQR    V++  LP K  +VI V+++  QR+LY+ F+            + +RK  F  
Sbjct: 598  FVQRRSHTVLQSTLPKKLEYVIFVRMTAFQRKLYETFM-----------TDVVRKKAFPN 646

Query: 1034 ---GYQALAQIWNHPGIL 1048
                +    +IWNHP +L
Sbjct: 647  PLKAFAVCCKIWNHPDVL 664



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/230 (43%), Positives = 140/230 (60%), Gaps = 6/230 (2%)

Query: 1088 LQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
            L+ K +D F    W  DL+  +   ++  S KM +   I+     +GD+ L+FSQS+ TL
Sbjct: 860  LRAKRNDEF-SCGWAVDLMKNYVSDQISNSPKMEIFFTIMKESMLLGDRILLFSQSLLTL 918

Query: 1148 DLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
            + IE +L     PG   +LW +   ++RLDG T S ER++LV  FN   N  VK  LIST
Sbjct: 919  NSIEGFLKASYVPGSH-ELWTRNISYFRLDGSTSSQERERLVNEFNS--NSNVKLFLIST 975

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
            RAGSLGINL  ANRVII D SWNP +D QA+YR +RYGQTKP + YR++    +E+KIY 
Sbjct: 976  RAGSLGINLTGANRVIIFDASWNPCHDTQAVYRIYRYGQTKPCYVYRIVMDKCLEKKIYD 1035

Query: 1268 RQVTKEGLAARVVDRQQVHRTISKEEMLHLF--EFGDDENPDPLTAVSKE 1315
            RQ+ K+G++ R+VD       +S +++ +L   +  DDEN +    V+ E
Sbjct: 1036 RQIKKQGMSDRIVDECNPEAHLSMKDITNLCHDDNSDDENVNETPKVAAE 1085


>gi|46125779|ref|XP_387443.1| hypothetical protein FG07267.1 [Gibberella zeae PH-1]
          Length = 1895

 Score =  292 bits (747), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 197/603 (32%), Positives = 299/603 (49%), Gaps = 85/603 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQ--SIRKVKSGDKGLGCILAH 759
            I+N  +E+ +  + +   I+  +K HQV G+RF+W  I++  S+R+        GC+LAH
Sbjct: 898  IINESKEEDQGLIYVNDHIARSIKQHQVDGVRFIWNQIVRDASVRQ--------GCLLAH 949

Query: 760  TMGLGKTFQVIAFLY-------------TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW 806
            TMGLGKT QVI  L               A    +L     L++ P  ++ NW  EF+KW
Sbjct: 950  TMGLGKTMQVITVLVALAEASESQDPSVVAQIPKDLQNSRTLVLCPAVLVDNWMDEFLKW 1009

Query: 807  RPSE-LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE 865
             P+  L  LR     +     R  ++  W +  GV ++ Y  F+ L          M+ E
Sbjct: 1010 APANALGALRK-CTANTPEHERPSIVTSWASGKGVLILSYNMFQILI--------EMSPE 1060

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            + + L+D PD++VCDEAH +KN  + T +A  + + + RIALTGSPL N L+EY+ M+D+
Sbjct: 1061 LSNLLRDRPDVVVCDEAHYMKNRDSKTNKACSRFQTKSRIALTGSPLSNKLLEYFAMIDW 1120

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            V   FLG   EFR  +  P++ G   +ST+ + +        L + +   V R ++ V+K
Sbjct: 1121 VAPNFLGPYSEFREIYSAPVKQGLFHDSTTAERREAQMLLKALEQMVAPKVHRRNIVVMK 1180

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
             DLPPK  F+I V  +  Q++LY+ +++  G + D            A    L  I +HP
Sbjct: 1181 GDLPPKQEFIIFVPPTEPQKKLYRLYME--GVSRDGGGTPDT----LAAIPHLGLICSHP 1234

Query: 1046 -----GILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD 1100
                  IL++ ++K      +  D S  +      +I E    +  F  G  D       
Sbjct: 1235 KCFQAKILEIIQNKIMSKVGEETDKSFPK-----TIIPEFTETLESF--GDLDSPAI--- 1284

Query: 1101 WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                            S K  LL  +L     + DK LVFSQS+ TLD +E         
Sbjct: 1285 ----------------SWKTELLTTVLNEAREVNDKVLVFSQSLITLDYLEDMCK----- 1323

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
                    +G+   R+DG+T  + RQ+ V+ FN+      +  LIST AG +G+N+H AN
Sbjct: 1324 -------NQGRTVSRMDGKTPVAVRQQQVKDFNQ---GSKEVFLISTAAGGVGLNIHGAN 1373

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            RV+I D   NP+++ QA+ RA+R GQ K VF YR M  GT E+ +  RQV K  LA+RVV
Sbjct: 1374 RVVIFDIRHNPSHEQQAVGRAYRIGQQKKVFVYRFMVAGTFEDNLNNRQVFKMQLASRVV 1433

Query: 1281 DRQ 1283
            D++
Sbjct: 1434 DKK 1436


>gi|425772270|gb|EKV10680.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum PHI26]
 gi|425774790|gb|EKV13090.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum Pd1]
          Length = 1428

 Score =  292 bits (747), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 198/608 (32%), Positives = 316/608 (51%), Gaps = 66/608 (10%)

Query: 713  AVRIP-----SSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            + RIP       I+  +K++Q+ GI+FM+  II++ R+        GC+LAHTMGLGKT 
Sbjct: 777  SFRIPMICLDPYIAQYVKSYQLSGIQFMFREIIENKREE-------GCLLAHTMGLGKTM 829

Query: 768  QVIAFLYT---AMRSVNLGLR----------TALIVTPVNVLHNWKQEFMKWRPSE--LK 812
            QVI+ L T   A  S +  +R            L++ P +++ NW  EF  W P    L 
Sbjct: 830  QVISLLVTISNAGASEDPSIRDQIPEQLRQSKTLLLCPASLIQNWCDEFEMWSPQNHNLG 889

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHAL-- 870
             +R     + + DR  E+   W  +GG+ ++ Y  FRN+   K   + + +++  + +  
Sbjct: 890  KVRSIPATNPTLDRTQEI-CTWNDEGGILILSYNIFRNIVKEKAETNEDQSQQPANEMVK 948

Query: 871  ---QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
                + P ++V DEA  ++N  +   +A  +++ ++RIALTG+P+ N L +YY MVD+V 
Sbjct: 949  SWVLNSPTLVVVDEAQNLRNHESQIAEAASRLRTRKRIALTGTPISNGLEDYYWMVDWVA 1008

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
              +LG   +F ++F  PIENG   +ST  D +   QR  +    +   VQR DM+ +  D
Sbjct: 1009 PQYLGEFPDFNDQFIKPIENGSQIDSTKSDRREALQRQELFLRIINPKVQRADMSALTND 1068

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGI 1047
            LPPK  + +  + + LQ+ +Y   + + G   +      +R    +    L    NHP +
Sbjct: 1069 LPPKYEYSVYFEPTTLQKAVYN--ILIKGVAQNEAG---VRSELMSWLPLLKLCCNHPAL 1123

Query: 1048 ----LQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
                L+  K K    ++ +  S +   +     +  +P+ M   +  + DD F  KD  N
Sbjct: 1124 FKTDLESRKTKSACGKQISPSSDAPVAI-LGFSMPVEPQVMPRSMLSELDDVF--KDIPN 1180

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
             L       +   S ++ +L +IL     +GDK LVFS SIPTL     YL+++   G Q
Sbjct: 1181 LL-------DPGLSSRVAILNEILDQAIAIGDKILVFSSSIPTLK----YLAEV-MDGAQ 1228

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
             K       +  L G    ++R ++V RFN   +      LIST+AG LG+N+ +ANRV+
Sbjct: 1229 RK-------YALLQGNVTPAQRPEVVRRFNN--DPSTYVFLISTKAGGLGLNIQAANRVV 1279

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            I D  +NPT++ QAI RA+R GQ K VF YR++A GT+EEKIY + + K  LA+R++D +
Sbjct: 1280 IFDFQFNPTWEQQAIGRAYRIGQKKKVFVYRMVAAGTVEEKIYNKTIFKSQLASRLLDDE 1339

Query: 1284 QVHRTISK 1291
             V R  SK
Sbjct: 1340 HVARMGSK 1347


>gi|242021061|ref|XP_002430965.1| hypothetical protein Phum_PHUM506220 [Pediculus humanus corporis]
 gi|212516185|gb|EEB18227.1| hypothetical protein Phum_PHUM506220 [Pediculus humanus corporis]
          Length = 687

 Score =  292 bits (747), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 166/455 (36%), Positives = 244/455 (53%), Gaps = 52/455 (11%)

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
            GPD++VCDE H++KN     ++ + Q+K  RRI LTG+PLQNNL EY+CM+ FV+   LG
Sbjct: 155  GPDLIVCDEGHVLKNEETKLSKTICQIKTSRRIVLTGTPLQNNLKEYHCMIQFVKPNLLG 214

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            +  EF N F NPI NGQ+ NS   DV++M +RSHIL+++L G VQR D++V+K+ LP K 
Sbjct: 215  TRKEFLNMFVNPISNGQYENSLKHDVQLMKERSHILHKKLSGCVQRFDLSVLKQYLPQKR 274

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
             +VI   L+  Q  +Y+ ++  +    D  S +    + FA YQ+L +IW HP   +L +
Sbjct: 275  EYVIFTPLTNHQIDMYEYYMSNYSAKGDP-SWKNTATALFADYQSLQRIWTHPYAFKLHE 333

Query: 1053 DK-------GYPSRE-------------DAEDSSSDENMDYNVVIGEKPRNMNDFLQGKN 1092
            D+       G P                +  DS   +   YN     K R          
Sbjct: 334  DRFIEFKIQGTPKNNDFDDDDDYDLDYDEFTDSKKKKKKKYN-----KTR---------- 378

Query: 1093 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEF 1152
                +  +WW         K  + S K    +             LVFS S+ +L +IE+
Sbjct: 379  ----YPLNWWTQFFSYDDIKNANQSYKXXRKIHFKKF-----HFRLVFSGSLYSLSIIEY 429

Query: 1153 YLSKLPRPGKQ-------GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
            +L ++     +          W+ G+D+  L G+T   +R    +RFN   NKR++  LI
Sbjct: 430  FLKEINNSNFEKSSLCDLTSSWELGEDYLVLTGQTSGKDRDTFCKRFNNNNNKRLRLFLI 489

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            ST+AG +GINL  ANR I+ D SWNP++D Q+I+R +R GQ KP   YR +A GTMEEKI
Sbjct: 490  STKAGGIGINLTGANRAILFDVSWNPSHDTQSIFRIYRIGQNKPCHVYRFVASGTMEEKI 549

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            Y+RQ+ K+ ++ RVVD     R   + E+  L++F
Sbjct: 550  YERQIMKQSISYRVVDELHTARHFKETELATLYKF 584



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 702 IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
           I++   E     V +  ++  KLK HQ  G++FMW    +S+ ++K    G GCILAH M
Sbjct: 77  ILDFDFENNVPLVSVHRNLVCKLKNHQKDGVKFMWSACYESLEQIKKSS-GSGCILAHCM 135

Query: 762 GLGKTFQ 768
           GLGKT Q
Sbjct: 136 GLGKTIQ 142


>gi|328705649|ref|XP_001947067.2| PREDICTED: hypothetical protein LOC100164965 [Acyrthosiphon pisum]
          Length = 2250

 Score =  291 bits (746), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 149/390 (38%), Positives = 226/390 (57%), Gaps = 45/390 (11%)

Query: 694  LGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL 753
            L D     ++NV     E  V +   I+  +K HQ+ G+RF+++N+++S+ + KS  KG 
Sbjct: 360  LPDESGRVLINVGHPDNEPDVFLAPQIARIIKPHQIGGVRFLYDNVVESLERFKSS-KGF 418

Query: 754  GCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            GCILAH+MGLGKT QV++F    +R  +   +  L + P+N L NW  EF  W P    P
Sbjct: 419  GCILAHSMGLGKTLQVVSFCDVFLR--HTPAKHVLCIMPINTLQNWMAEFNMWLPLPDDP 476

Query: 814  -----------------LRVFMLEDVSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFG 854
                               +F+L D  +    R +++  WR +GGV L+GY  +R L+  
Sbjct: 477  KNSSENTTNSGDIIHRQFPLFVLNDFHKTISARGKVIESWRVEGGVLLMGYELYRQLTSR 536

Query: 855  KHV---------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQ 898
            K                 K++ +  E+  AL + GPD+++CDE H IKN+ A T+Q+LK+
Sbjct: 537  KPRKKRNKKQIDDDFYDEKNKPLLDEMRDALVKPGPDLVICDEGHRIKNSHASTSQSLKE 596

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            ++ +RR+ LTG PLQNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+
Sbjct: 597  IESRRRVVLTGYPLQNNLLEYWCMVDFVRPNYLGTKTEFSNMFERPIQNGQCIDSTPQDI 656

Query: 959  KIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT 1018
            ++M  R+H+L+  L+GFVQR   +V++K LP K  FV+ V+++PLQR LY RF+      
Sbjct: 657  RLMRHRAHVLHSLLEGFVQRRSHSVLEKTLPQKEEFVLLVRMTPLQRLLYDRFM------ 710

Query: 1019 NDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
             + V  +K   +    +    +IWNHP IL
Sbjct: 711  -NEVVRKKAVPNPLKAFAVCCKIWNHPDIL 739



 Score =  178 bits (452), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/208 (46%), Positives = 132/208 (63%), Gaps = 4/208 (1%)

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
            GK + G    DW  +L +++    ++ S KM LL  I+     +GD+ L+FSQS+ TLDL
Sbjct: 1670 GKEEPGI-PYDWAVELFNDYVPGMIEASAKMSLLFAIVEESVRIGDRVLLFSQSLFTLDL 1728

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            IE +L +   PGK  + W +  D+YRLDG T +SER+KL+  FN  +   V   L+STRA
Sbjct: 1729 IEEFLQRNKIPGKD-EHWCRNCDYYRLDGSTSASEREKLINDFN--ICNTVHLFLVSTRA 1785

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL  ANRVI+ D SWNP +D QA+ R +RYGQ KP F YRL+    +E+KIY RQ
Sbjct: 1786 GSLGINLVGANRVIVFDASWNPCHDTQAVCRVYRYGQQKPCFVYRLVTDNCLEKKIYDRQ 1845

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHL 1297
            + K+ +A RVVD       +S +E+ +L
Sbjct: 1846 INKQVMADRVVDECNPDAHLSIKEVTNL 1873


>gi|346971400|gb|EGY14852.1| DNA excision repair protein ERCC-6 [Verticillium dahliae VdLs.17]
          Length = 1807

 Score =  291 bits (744), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 217/705 (30%), Positives = 342/705 (48%), Gaps = 121/705 (17%)

Query: 617  SDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLM 676
            +  D +L        KK+ RR+++D   G +  R+  ++K+  +  + L++Q     +L 
Sbjct: 789  ASGDEDLTGNEATPSKKRRRRVIEDQ--GAKDNREANLQKQALDEERRLKLQ----QRLA 842

Query: 677  NSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEE---AVRIPSSISAKLKAHQVVGIR 733
             S T+ GD S               I+NV + KG++    V +   I+ K+K HQ+ G+R
Sbjct: 843  ASATISGDRSR-------------LIINVSK-KGDDDKDFVYVNDEIARKIKDHQIEGVR 888

Query: 734  FMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT---AMRSVNLGLRT---- 786
            FMW  ++       +G +G  C+LA TMGLGKT Q+I  L     A  S    +R     
Sbjct: 889  FMWNQVV-------AGKQG--CLLAQTMGLGKTMQIITLLIAIVEASASPEPSVRAQIPE 939

Query: 787  ------ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR--RAELLAKWRAKG 838
                   L++ P  ++ NW++E   W    +  L      D  +D   R   L +W  +G
Sbjct: 940  RLQRSQTLVICPTGIVDNWREELTAWDNQSV--LGECYTVDSKQDSVTRTSTLQEWDVRG 997

Query: 839  GVFLIGYTAFRNLS-----FGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
            GV ++GY   R+L+     F K + DR             P+I+V DEAH +KN R+   
Sbjct: 998  GVLVLGYDMLRSLARADEGFKKILTDR-------------PNIVVADEAHRLKNQRSKLA 1044

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
                Q +   RIALTGSPL NN+ E+Y M+D+V E +LG   EF   +  PI+ G + +S
Sbjct: 1045 AIGSQFRTPSRIALTGSPLANNVGEFYSMIDWVAENYLGPLKEFNAYYALPIQEGLYGDS 1104

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
            +  + ++  +R  IL + +     R+ +  +K +LP K  F +TV L+PLQ  LY    D
Sbjct: 1105 SHGEYRLAKKRLAILAKTVAPKTHRLTIKALKDELPDKVEFFLTVPLTPLQEELY----D 1160

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG--ILQLTKDKGYPSREDAEDSSSDEN- 1070
            L+   + R + E    S FA    +  + NHP     +L K+K         D++ D++ 
Sbjct: 1161 LY-VRSVRENAESQADSTFAVLDNMILLNNHPRCYFRKLEKEKNMLRVPQGGDTTQDKSI 1219

Query: 1071 ----MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
                +  ++ +  + R++ND                           +  S K+ +L+ I
Sbjct: 1220 TPAFLTKSMKVLNRCRDLND---------------------------ISLSWKVKVLVAI 1252

Query: 1127 LTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQ 1186
            L  C  + +K L+FSQSIPT+D +     +  RP            + RL G T  S RQ
Sbjct: 1253 LDECRKLREKVLIFSQSIPTIDWLSTLFRQQKRP------------YSRLTGDTLPSIRQ 1300

Query: 1187 KLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
             +V+ FNE  N   +  +IST+AG  G+N+  A+RV+I D  +NP  + QAI RA+R GQ
Sbjct: 1301 SMVKNFNEGDN---EIFVISTQAGGQGLNITGASRVVIFDFRFNPIAEQQAIGRAYRIGQ 1357

Query: 1247 TKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            +KPV  YR ++ GT E+ +Y + V K  LA+RVVD+    R  +K
Sbjct: 1358 SKPVVVYRFVSGGTYEQHLYNKAVWKMQLASRVVDKDNPKRWSTK 1402


>gi|320588259|gb|EFX00734.1| snf2 family helicase [Grosmannia clavigera kw1407]
          Length = 1741

 Score =  290 bits (742), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 192/608 (31%), Positives = 297/608 (48%), Gaps = 75/608 (12%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII--QSIRKVKSGDKGLGCI 756
            T  I+N  RE  +  + +   I  +++ HQ+ G+RFMW  ++    +R+        GC+
Sbjct: 826  TRLIINDAREDNQSVIYVNPEIGLRIRDHQIAGVRFMWNQLLIPSEMRQ--------GCL 877

Query: 757  LAHTMGLGKTFQVIAFLY-------------TAMRSVNLGLRTALIVTPVNVLHNWKQEF 803
            LAHTMGLGKT QVI  L               A   V+L     LI+ P  ++ NW  E 
Sbjct: 878  LAHTMGLGKTMQVITLLVAISESAISPDENIVAQIPVDLRESKTLILCPSGLVENWLDEI 937

Query: 804  MKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNL--SFGKHVKDRN 861
              W P  L  +   +  ++S + R   + +W   GGV +IGY   R L   FG  +K   
Sbjct: 938  SCWTPPGLLGVCYPLTSELSSEERYTTVKRWADNGGVMIIGYPMLRKLLEFFGDEMKS-- 995

Query: 862  MAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 921
                    L+D P I+V DEAH +KN ++   +A    K   RIA+TGSPL N++ EY+ 
Sbjct: 996  -------LLEDSPHIVVADEAHALKNPKSKLHEATANFKTTARIAMTGSPLANSVEEYHS 1048

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 981
            M+++V   +L    EF  ++  PI+ G + +ST +  +    R  +L + +   + R  +
Sbjct: 1049 MINWVAPNYLADHREFAAKYATPIKEGFYRDSTKQQKRQALMRLKVLKDTVAPKIHRATV 1108

Query: 982  NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL---HGFTNDRVSNEKIRKSFFAGYQAL 1038
              +K +LP K  F++ + L+ LQ ++Y+RF+D+    G  +D  +  ++    F     L
Sbjct: 1109 ATLKGELPQKKEFILYLPLTELQMQVYERFIDIVNDPGILSDINNTVQLWNLLFNLTLLL 1168

Query: 1039 AQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
            A    HP + +L                  E M  ++  G++ R+ +             
Sbjct: 1169 A----HPKVFKLRL----------------EEMKSHIREGQRERDAHHPSSASPYSATLP 1208

Query: 1099 KDWWNDLL---HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLS 1155
                  LL    +    +L +S K+++L+ IL      GDK L+FSQS   LD +E    
Sbjct: 1209 LAVVQKLLSIGQKRNIDDLHHSSKVMVLMGILDEAREAGDKVLIFSQSKLVLDYLEDVFQ 1268

Query: 1156 KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGIN 1215
                        +K + + RLDG T    RQ +V+ FN     R +  LIST AG +G+N
Sbjct: 1269 ------------RKKRRYSRLDGDTVVRWRQGMVKSFNA---GRDEIYLISTTAGGVGLN 1313

Query: 1216 LHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGL 1275
            +H ANRV+I D  WNP ++ QAI RA+R GQTKPVF Y L+  GT E  ++ + V K  L
Sbjct: 1314 IHGANRVVIFDFKWNPMHEQQAIGRAYRIGQTKPVFVYWLITGGTFETVLHDQAVFKTQL 1373

Query: 1276 AARVVDRQ 1283
            A+RVVD++
Sbjct: 1374 ASRVVDKK 1381


>gi|157118940|ref|XP_001659258.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti]
 gi|108875506|gb|EAT39731.1| AAEL008484-PA [Aedes aegypti]
          Length = 2625

 Score =  290 bits (741), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 152/384 (39%), Positives = 222/384 (57%), Gaps = 47/384 (12%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            ++N+   +GEE + +   I+  +K HQ+ G+RF+++NII+SI +  +   G GCILAH+M
Sbjct: 573  VINIGHAEGEEDIFLAPQIARIIKPHQIGGVRFLFDNIIESIERYDTS-TGFGCILAHSM 631

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP-----------SE 810
            GLGKT Q++ F    +R  +   +T LI+ P+N L NW  EF  W P            E
Sbjct: 632  GLGKTLQLVCFCDIFLR--HTSSKTVLIIMPINTLQNWLNEFNTWLPEDAEKSPLNNHGE 689

Query: 811  LKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVK-------- 858
            ++P   ++F+L D  +    RA+++ +W   GGV LIGY  +R LS  K  K        
Sbjct: 690  VRPRNFKIFILNDSHKTLKSRAKVVLEWAKSGGVLLIGYEMYRLLSQKKMTKKKKKKKNE 749

Query: 859  -------------DRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRR 904
                          +NM  EI  AL + GPD++VCDE H IKN+ A  + ALKQ+K +RR
Sbjct: 750  SAPVEEEKESTEDQKNMFDEIHEALVKPGPDLVVCDEGHRIKNSHAGISVALKQIKSKRR 809

Query: 905  IALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQR 964
            I LTG PLQNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R
Sbjct: 810  IVLTGYPLQNNLLEYWCMVDFVRPNYLGTKTEFSNMFERPIQNGQCIDSTPQDIKLMRYR 869

Query: 965  SHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSN 1024
            +H+L+  L GFVQR    V++  LP K  FV+ ++++  QR+LY  F+       + V  
Sbjct: 870  AHVLHSLLLGFVQRRSHAVLQTSLPQKEEFVLLIRMTEFQRKLYTIFM-------NEVVR 922

Query: 1025 EKIRKSFFAGYQALAQIWNHPGIL 1048
             K   +    +    +IWNHP +L
Sbjct: 923  TKAVPNPLKAFAVCCKIWNHPDVL 946



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/205 (43%), Positives = 128/205 (62%), Gaps = 4/205 (1%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            +W  +L+  +    L+ S KM +   IL     +GD+ LVFSQS+ TL+LIE +L +   
Sbjct: 1395 EWAFELMKGYVPDLLESSPKMEIFFYILEESIKLGDRMLVFSQSLLTLNLIERFLQRNKI 1454

Query: 1160 PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
            PG +   W K   +YRLDG T + ER+KL+  FN   N  +   L+STRAGSLGINL  A
Sbjct: 1455 PGTENN-WAKNASYYRLDGSTTAQEREKLINEFNS--NPNIHLFLVSTRAGSLGINLVGA 1511

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NRV++ D SWNP +D QA+ R +RYGQ KP F YRL+    +E+KIY RQ+ K+G++ R+
Sbjct: 1512 NRVVVFDASWNPCHDTQAVCRVYRYGQKKPCFVYRLVVDNCLEKKIYDRQINKQGMSDRI 1571

Query: 1280 VDRQQVHRTISKEEMLHL-FEFGDD 1303
            VD       +S +E+  L ++ G+D
Sbjct: 1572 VDECNPDAHLSMKEVTSLCYDDGED 1596


>gi|429856567|gb|ELA31472.1| snf2 family helicase [Colletotrichum gloeosporioides Nara gc5]
          Length = 1822

 Score =  289 bits (739), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 212/680 (31%), Positives = 328/680 (48%), Gaps = 104/680 (15%)

Query: 631  QKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGAS 690
            Q  K  R  D   L E+ KR+I + K    +L +  +  S KS+L               
Sbjct: 771  QTAKDLRETDQQRLQEQEKRRIELRK----KLAASAIIPSDKSRL--------------- 811

Query: 691  IEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII--QSIRKVKS 748
                       I+N  ++  +  + I   I  ++K HQ+ G+RFMW  II    +R+   
Sbjct: 812  -----------IINESKQDDQGLIYINEDIGRRIKDHQIQGVRFMWNQIICDPKVRQ--- 857

Query: 749  GDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV-------------NLGLRTALIVTPVNV 795
                 GC+LAHTMGLGKT QVI  L     S              +L     L++ P  +
Sbjct: 858  -----GCLLAHTMGLGKTMQVITLLVAIAESAQSPDEPINSQIPNDLRQSKTLVLCPSLL 912

Query: 796  LHNWKQEFMKWRPSEL-KPLRVFMLEDVSR-DRRAELLAKWRAKGGVFLIGYTAFRNL-- 851
            + NW  E + W P  L  P   F LE  ++ + R  ++ +W  +GGV +IGY  F+ L  
Sbjct: 913  VDNWLDEMLMWAPEGLLGPY--FKLESATKQNERMPIIRRWDDEGGVMIIGYDMFKRLVD 970

Query: 852  SFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSP 911
              G+ +   N  +   + L   P+++V DEAH +KN  +  + A  Q + Q RIALTGSP
Sbjct: 971  EPGEELPKENDGKTAWNILTQSPNLVVADEAHKLKNPDSKISLAASQFRTQSRIALTGSP 1030

Query: 912  LQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQ 971
            L N++ EYY M+D+V   +LG   EFR+ +   I+ G + +ST    ++  ++  +L + 
Sbjct: 1031 LANSVEEYYYMIDWVAPRYLGPPSEFRDLYTRTIQEGLYEDSTRSQFRMAKKQLAVLEKT 1090

Query: 972  LKGFVQRMDM-NVVKKDLPPKTVFVITVKLSPLQRRLYKRFL-DLHGFTNDRVSNEKIRK 1029
            +     R  + ++ K DLP KT F++TV ++ LQ RLY  +L    G  + +VS+     
Sbjct: 1091 VAPKAHRATIKSLSKNDLPQKTEFILTVPVTDLQARLYDAYLQSARGDADQQVSSR---- 1146

Query: 1030 SFFAGYQALAQIWNHPGILQ--LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDF 1087
                    L  I NHP   Q  L +++   + ++  + S++  +    V+    + MN  
Sbjct: 1147 -ILGIVSNLGLIVNHPRCWQNKLAQERRLDTSKNPSNRSANLALS-PAVVSSGLKMMN-- 1202

Query: 1088 LQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
             + K D       W                 K  LL+ IL     + DK LVF+ SIPT+
Sbjct: 1203 -RPKVDIQSAVLSW-----------------KTRLLVAILAESEKVKDKVLVFTSSIPTM 1244

Query: 1148 DLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
            D    YL  L        L ++ +   RLDG T  + RQ+ ++ FN   +   +  LIST
Sbjct: 1245 D----YLENL--------LRQQKRKVARLDGSTPINLRQQHIKNFN---SGDTQVYLIST 1289

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
             AG +G+N++ ANRV++ D  +NP  + QA+ RA+R GQ KPVF Y+L++ GT E  +  
Sbjct: 1290 TAGGIGLNIYGANRVVLFDFKYNPVNEQQAVGRAYRIGQQKPVFVYKLLSGGTFESAMQN 1349

Query: 1268 RQVTKEGLAARVVDRQQVHR 1287
            R V K  LA+RVVD++   R
Sbjct: 1350 RSVFKTQLASRVVDKENPKR 1369


>gi|324501944|gb|ADY40860.1| Helicase ARIP4 [Ascaris suum]
          Length = 1138

 Score =  289 bits (739), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 160/402 (39%), Positives = 227/402 (56%), Gaps = 50/402 (12%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            VN  +   +  V +P  ++  L+ HQ+ GIRFM++NII+++        G GCILAH+MG
Sbjct: 189  VNAGKPPDDPDVYVPKHLTHVLQPHQLGGIRFMYDNIIETVNGFDKS-SGFGCILAHSMG 247

Query: 763  LGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSEL-------KPLR 815
            LGKT QVIAF    +R+     +  LI+ PVN + NW  E+ +W P  L       +P  
Sbjct: 248  LGKTIQVIAFTDIFVRATKA--KNILIIVPVNTILNWYSEYDRWLPDRLADDGTPVRPFT 305

Query: 816  VFMLED--VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGK------------------ 855
            VF+L D   + ++RA+LL +W  +GGV LIGY  FR L   +                  
Sbjct: 306  VFLLGDHIKTAEQRAQLLQRWHTEGGVLLIGYDMFRLLVNIQTQQKKRIKKSKKVKSEVV 365

Query: 856  -------HVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALT 908
                    + +R  AR+    +  GPD+++CDE H IKN +     +L  ++ +RRI LT
Sbjct: 366  DLEQEEIEIINRKAARKAL--INPGPDLVICDEGHRIKNDKTGIATSLSAIRTRRRIVLT 423

Query: 909  GSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHIL 968
            G PLQNNL+EY+CMVDFVR  FLG+  EF+N F+ PI+NG   +ST  DVK+  QR+H+L
Sbjct: 424  GYPLQNNLLEYFCMVDFVRPSFLGTKKEFKNMFERPIKNGICIDSTPSDVKLARQRTHVL 483

Query: 969  YEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIR 1028
             E LKGFVQR   +++K  LPP   +VI ++ SP+QR LY+ FL    +    +++  I 
Sbjct: 484  VEMLKGFVQRRTHHLLKTILPPTFEYVILLRKSPIQRILYRAFLQ---YVQSEITSLGI- 539

Query: 1029 KSFFAGYQALA---QIWNHPGILQLTKDKGYPSREDAEDSSS 1067
             S F   +A A   +IWNHP IL    +K    +EDAE   S
Sbjct: 540  -SMFNPLKAFAACSKIWNHPDILYDVLEK---QKEDAEKEKS 577



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/195 (47%), Positives = 125/195 (64%), Gaps = 8/195 (4%)

Query: 1119 KMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP---RPGKQGKLWKKGKDWYR 1175
            KM + LDI+   + +GDK L+FSQS+ TL+LIE YL K      P  +   WKK + + R
Sbjct: 764  KMAISLDIIKQATEIGDKVLLFSQSLLTLNLIERYLEKFGAVCTPNAK-ITWKKNQTYLR 822

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
             DG T + +R+KL+ RFN+  + +V   LISTRAGSLGINL +ANRVII D SWNP +D 
Sbjct: 823  FDGSTPAIDREKLINRFND--DPQVYLFLISTRAGSLGINLVAANRVIIFDASWNPCHDA 880

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA+ R +RYGQ K  F YRL+   +ME+ I+ RQ+ K GL  RVVD +Q+   ++K E+ 
Sbjct: 881  QAVCRIYRYGQKKRTFIYRLVMDNSMEKGIFNRQIGKSGLQQRVVDDRQLDVDVTKSELE 940

Query: 1296 HLFEFGDDENPDPLT 1310
             L  +  DE  D  T
Sbjct: 941  QLLVY--DEAFDVFT 953


>gi|157114744|ref|XP_001652400.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti]
 gi|108883553|gb|EAT47778.1| AAEL001141-PA [Aedes aegypti]
          Length = 1445

 Score =  289 bits (739), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 166/468 (35%), Positives = 266/468 (56%), Gaps = 38/468 (8%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +K IR++L  + L + TK     EKER++R+       + + K+ N V  D       
Sbjct: 449  KGRKNIRKLLKKSALEQTTKEAEQEEKERKQRI-------AERQKMYNQV-YDEKPEEVK 500

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 749
             I+ L       +++   E  E  +++   +  KLK HQ  GI+FM++   +S+ + +  
Sbjct: 501  EIKQL-------VLDFDEESKEPLLQVDEKLVKKLKPHQANGIKFMFDACFESLERARDS 553

Query: 750  DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL-GLRTALIVTPVNVLHNWKQEFMKWRP 808
             KG GCILAH MGLGKT QV+   +T + +  + G+   L+V P++ + NW  EF  W  
Sbjct: 554  -KGSGCILAHCMGLGKTLQVVTLSHTLLANSEVTGVERILVVCPLSTVLNWVNEFRIWMK 612

Query: 809  SELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAR 864
               K   V + E +S+ +    RA  L +W  +GGV ++GY  FRNLS     + R   R
Sbjct: 613  HVKKGTEVEVYE-ISKYKNNVIRANQLMEWHNEGGVMILGYDMFRNLSNQTTGRIRKKVR 671

Query: 865  EICHA--LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
            E      +  GPD+++CDE H++KN +   ++A+ +++  RRI LTG+P+QNN+ EYYCM
Sbjct: 672  ESLQTSLIDPGPDLIICDEGHLLKNEKTSLSKAVNRIRTLRRIVLTGTPIQNNMKEYYCM 731

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
            V FV+   LG+ +E+ NRF NPI NGQ+T+ST  D+++M +R+H+L++ L G VQR D  
Sbjct: 732  VQFVKPKLLGTYNEYMNRFVNPITNGQYTDSTPYDIQLMRKRAHVLHKLLDGCVQRRDYA 791

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQALAQ 1040
            V+   LPPK  FV++++L+PLQ  LYK +++       + +NE+ +++   F+ +Q L +
Sbjct: 792  VLAPFLPPKLEFVVSIRLTPLQCTLYKYYMETQA---RKQNNEESKRASVLFSDFQNLQR 848

Query: 1041 IWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFL 1088
            IW HP +L+   D+    ++   D  SD+       IG    +M DFL
Sbjct: 849  IWTHPRVLRYNSDRYEYMQQKKRDMMSDDE-----SIG----SMKDFL 887



 Score =  199 bits (505), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/217 (45%), Positives = 139/217 (64%), Gaps = 12/217 (5%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL-- 1157
            +WW  ++ E     L++SGK+ +L +IL  C  +GDK LVFSQS+ +LD+IE +LS +  
Sbjct: 968  EWWMSMVPEEELDNLEHSGKLQVLFEILKECEAIGDKLLVFSQSLYSLDVIEHFLSLVDD 1027

Query: 1158 -------PRPGKQGKL---WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
                    R  K  K    W  G D++RLDG T    R    + FN+  N R +  LIST
Sbjct: 1028 NTQKDDEERDSKLDKYQGSWTLGLDYFRLDGSTAIESRNAACKVFNDDSNHRARLFLIST 1087

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
            RAG LGINL +ANRVII D SWNP++D+Q+I+R +R+GQ KP + YR +A GTMEEKIY+
Sbjct: 1088 RAGGLGINLVAANRVIIFDVSWNPSHDIQSIFRVYRFGQIKPCYIYRFLAMGTMEEKIYE 1147

Query: 1268 RQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            RQVTK+ ++ RV+D QQ+ R   + ++  L+ + + E
Sbjct: 1148 RQVTKQAISKRVIDEQQIDRHYKENDLQELYRYDNIE 1184


>gi|296809167|ref|XP_002844922.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma otae CBS
            113480]
 gi|238844405|gb|EEQ34067.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma otae CBS
            113480]
          Length = 1771

 Score =  289 bits (739), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 220/754 (29%), Positives = 362/754 (48%), Gaps = 117/754 (15%)

Query: 589  LKRLTSELGRAMGSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEET 648
            L+++  E G A  +  +I+   E D    DAD     G  R   +K R            
Sbjct: 781  LQKIPQE-GSAQANNPIIIEDEEDDPSGKDADAQ---GSTRATPRKKR------------ 824

Query: 649  KRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVRE 708
            KR +A  +E      +++ Q  ++ ++    +    L     IE   D     IV+    
Sbjct: 825  KRPVAESRE------AMETQNRAQRRVEEQASQQRRLQEEGGIE--NDDPERKIVSF--- 873

Query: 709  KGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ 768
              +  + +   +  ++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT Q
Sbjct: 874  -DDPVIYLHRDLGRRVKEHQISGIQFMWRELIKD-------EKNEGCLLAHTMGLGKTMQ 925

Query: 769  VIAFLYTAMRSVNLG-----------LRTA--LIVTPVNVLHNWKQEFMKWRPSELKPL- 814
            VI+ L T   + N             LRT+  LI  P +++ NW++EF KW P + K   
Sbjct: 926  VISLLVTIANASNSSDPKIKLQVPERLRTSRTLITCPASLIDNWEEEFAKWTPPDTKTRY 985

Query: 815  ---RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVK--DRNMAREICHA 869
                V  +  ++  +R   +  W  +GGV LI +   R +      K   + +  E C  
Sbjct: 986  NLGEVRKVVSLNPLQRLVTINAWYTEGGVLLISHELLRRMIHNPTQKPDSQRLPLEKCEI 1045

Query: 870  LQ----DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            ++    DGP+I+V DEAH +KN  ++ ++A    K + RIALTGSPL N L++YY M+++
Sbjct: 1046 IKCQLLDGPNIIVADEAHKLKNGASNLSKACAMFKSKSRIALTGSPLSNQLIDYYQMINW 1105

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            +  G+LG+  +F+ +++ PI  G + +ST+ +     ++  +L + L+  V R  ++V++
Sbjct: 1106 ISPGYLGTLKQFKAKYEEPIREGLYYDSTNWEYVQSRKKLEVLKKVLEPKVNRAGVSVIQ 1165

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
            KDLP K  FVI + ++PLQ   Y +F+ L      +   E  R   +A    L  + +HP
Sbjct: 1166 KDLPSKVEFVIVIPVTPLQEETYNQFVALT--MEGKGDFEFTR--LWALLSYLTLLCHHP 1221

Query: 1046 G---------------------ILQLTKDKGYPSRE----DAEDSSSDENMDYNVVIGEK 1080
                                   ++ ++    PS      + EDS +   ++   +  E+
Sbjct: 1222 SCFLRKLLEKKKEKSEVNDRWKAMEGSQVVVVPSESEPEANPEDSPTLAEVEDAAIATEE 1281

Query: 1081 PRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD---YSGKMVLLLDILTMCSNMGDKS 1137
               + D L  + +  F             + K LD   +S ++ ++  I+      GDK 
Sbjct: 1282 QATITDELVSQFEQKF------------KSIKNLDSPEHSRRIQMVGQIVDESIKAGDKV 1329

Query: 1138 LVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLN 1197
            L+FS  + TL  I   L+             KG+ + RLDG+T  + RQ   + F+   N
Sbjct: 1330 LIFSGYLYTLTYIGTMLA------------AKGQKFCRLDGKTPIATRQAATKSFS---N 1374

Query: 1198 KRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMA 1257
               +  LIST+AG+LG+N+  ANRVII +  +NPT++ QAI RA+R GQTK VF YR + 
Sbjct: 1375 SDSQVYLISTKAGALGLNIIGANRVIIFESEYNPTWEEQAIGRAYRLGQTKDVFVYRFVM 1434

Query: 1258 HGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
             GT EE I+++ V K+ +A R VD++   R+  K
Sbjct: 1435 GGTFEELIHEKGVFKKNMALRAVDKKNPTRSTGK 1468


>gi|198458067|ref|XP_002138492.1| GA24365 [Drosophila pseudoobscura pseudoobscura]
 gi|198136210|gb|EDY69050.1| GA24365 [Drosophila pseudoobscura pseudoobscura]
          Length = 1651

 Score =  289 bits (739), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/378 (39%), Positives = 218/378 (57%), Gaps = 46/378 (12%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN+   +GEE + +   I+  +K HQ+ G+RF+++NII+S R+      G GCILAH+M
Sbjct: 321  VVNIAHPEGEETLYLAPQIAKVIKPHQIGGVRFLYDNIIESTRRFNKSS-GFGCILAHSM 379

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP-----SELKP--L 814
            GLGKT QV++F    +R  +   +T L V P+N L NW  EF  W P       ++P   
Sbjct: 380  GLGKTLQVVSFCDIFLR--HTSAKTVLCVMPINTLQNWLSEFNMWVPRYTADHNIRPRQF 437

Query: 815  RVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN----------- 861
             +++L D  +    RA+++  W  +GGV LIGY  FR L+  K V+ R            
Sbjct: 438  DIYVLNDQQKTLTARAKVILNWVQEGGVLLIGYELFRLLAL-KLVRTRKRKGANAFRADG 496

Query: 862  -------MAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN 914
                   M R     ++ GPD+++CDE H IKN+ A  + ALKQ++ +RRI LTG PLQN
Sbjct: 497  HDASSDLMNRVFEALVKPGPDLVICDEGHRIKNSHAGISLALKQIRTRRRIVLTGYPLQN 556

Query: 915  NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG 974
            NL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R+H+L+  L G
Sbjct: 557  NLLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLG 616

Query: 975  FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA- 1033
            FVQR    V++  LP K  +VI VK++  QR+LY  F+            + +RK  F  
Sbjct: 617  FVQRRSHKVLQITLPQKHEYVILVKMTAFQRKLYDTFM-----------TDVVRKKAFPN 665

Query: 1034 ---GYQALAQIWNHPGIL 1048
                +    +IWNHP +L
Sbjct: 666  PLKAFAVCCKIWNHPDVL 683



 Score =  184 bits (467), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/207 (44%), Positives = 131/207 (63%), Gaps = 5/207 (2%)

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
            +ND+  F   W  DL+  +   +++ S KM +   IL      GD+ L+FSQS+ TL+++
Sbjct: 900  RNDE--FSCSWAVDLMRNYVAGQIENSPKMEIFFCILKESMQFGDRILLFSQSLLTLNIL 957

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E YL     PG   + W +   ++RLDG T S ER++LV  FN   N +VK  LISTRAG
Sbjct: 958  EGYLKTSYVPGT-NQFWTRSYSYFRLDGSTSSQERERLVNEFNA--NSQVKLFLISTRAG 1014

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
            SLGINL  ANRVII D SWNP +D QA+YR +RYGQTKP + YR++    +E+KIY RQ+
Sbjct: 1015 SLGINLTGANRVIIFDASWNPCHDTQAVYRIYRYGQTKPCYVYRIVMDKCLEKKIYDRQI 1074

Query: 1271 TKEGLAARVVDRQQVHRTISKEEMLHL 1297
             K+G++ R+VD       +S +E+ +L
Sbjct: 1075 KKQGMSDRIVDECNPEAHLSMKEITNL 1101


>gi|195151315|ref|XP_002016593.1| GL10420 [Drosophila persimilis]
 gi|194110440|gb|EDW32483.1| GL10420 [Drosophila persimilis]
          Length = 1641

 Score =  288 bits (738), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/378 (39%), Positives = 218/378 (57%), Gaps = 46/378 (12%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN+   +GEE + +   I+  +K HQ+ G+RF+++NII+S R+      G GCILAH+M
Sbjct: 321  VVNIAHPEGEETLYLAPQIAKVIKPHQIGGVRFLYDNIIESTRRFNKSS-GFGCILAHSM 379

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP-----SELKP--L 814
            GLGKT QV++F    +R  +   +T L V P+N L NW  EF  W P       ++P   
Sbjct: 380  GLGKTLQVVSFCDIFLR--HTSAKTVLCVMPINTLQNWLSEFNMWVPRYTADHNIRPRQF 437

Query: 815  RVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN----------- 861
             +++L D  +    RA+++  W  +GGV LIGY  FR L+  K V+ R            
Sbjct: 438  DIYVLNDQQKTLTARAKVILNWVQEGGVLLIGYELFRLLAL-KLVRTRKRKGANAFRADG 496

Query: 862  -------MAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN 914
                   M R     ++ GPD+++CDE H IKN+ A  + ALKQ++ +RRI LTG PLQN
Sbjct: 497  HDASSDLMNRVFEALVKPGPDLVICDEGHRIKNSHAGISLALKQIRTRRRIVLTGYPLQN 556

Query: 915  NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG 974
            NL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R+H+L+  L G
Sbjct: 557  NLLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLG 616

Query: 975  FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA- 1033
            FVQR    V++  LP K  +VI VK++  QR+LY  F+            + +RK  F  
Sbjct: 617  FVQRRSHKVLQITLPQKHEYVILVKMTAFQRKLYDTFM-----------TDVVRKKAFPN 665

Query: 1034 ---GYQALAQIWNHPGIL 1048
                +    +IWNHP +L
Sbjct: 666  PLKAFAVCCKIWNHPDVL 683



 Score =  184 bits (467), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/207 (44%), Positives = 131/207 (63%), Gaps = 5/207 (2%)

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
            +ND+  F   W  DL+  +   +++ S KM +   IL      GD+ L+FSQS+ TL+++
Sbjct: 900  RNDE--FSCSWAVDLMRNYVAGQIENSPKMEIFFCILKESMQFGDRILLFSQSLLTLNIL 957

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E YL     PG   + W +   ++RLDG T S ER++LV  FN   N +VK  LISTRAG
Sbjct: 958  EGYLKTSYVPGT-NQFWTRSYSYFRLDGSTSSQERERLVNEFNA--NSQVKLFLISTRAG 1014

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
            SLGINL  ANRVII D SWNP +D QA+YR +RYGQTKP + YR++    +E+KIY RQ+
Sbjct: 1015 SLGINLTGANRVIIFDASWNPCHDTQAVYRIYRYGQTKPCYVYRIVMDKCLEKKIYDRQI 1074

Query: 1271 TKEGLAARVVDRQQVHRTISKEEMLHL 1297
             K+G++ R+VD       +S +E+ +L
Sbjct: 1075 KKQGMSDRIVDECNPEAHLSMKEITNL 1101


>gi|194756856|ref|XP_001960686.1| GF13478 [Drosophila ananassae]
 gi|190621984|gb|EDV37508.1| GF13478 [Drosophila ananassae]
          Length = 1575

 Score =  288 bits (738), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 149/373 (39%), Positives = 216/373 (57%), Gaps = 37/373 (9%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN+   +GEE + +   I+  +K HQ+ G+RF+++NII+S R+      G GCILAH+M
Sbjct: 313  VVNMAHPEGEETLFLAPQIAKVIKPHQIGGVRFLYDNIIESTRRYNKS-SGFGCILAHSM 371

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP-----SELKP--L 814
            GLGKT QV++F    +R  +   +T L V P+N L NW  EF  W P     S ++P   
Sbjct: 372  GLGKTLQVVSFCDIFLR--HTSAKTVLCVMPINTLQNWLSEFNMWIPRYSADSNVRPRNF 429

Query: 815  RVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA--- 869
             +++L D  +    RA+++  W  +GGV LIGY  FR L+  K VK R     I      
Sbjct: 430  DIYVLNDQQKTLTARAKVILNWVHEGGVLLIGYELFRLLAL-KLVKTRKRKGSIVRPDGM 488

Query: 870  --------------LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNN 915
                          ++ GPD+++CDE H IKN+ A  + ALKQ++ +RRI LTG PLQNN
Sbjct: 489  DSSSDLMNLVFEALVKPGPDLVICDEGHRIKNSHAGISLALKQIRTRRRIVLTGYPLQNN 548

Query: 916  LMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF 975
            L+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R+H+L+  L GF
Sbjct: 549  LLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLGF 608

Query: 976  VQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY 1035
            VQR    V++  LP K  +VI V+++  QR+LY  F+         V   K   +    +
Sbjct: 609  VQRRSHTVLQSTLPQKYEYVILVRMTAFQRKLYDTFM-------TDVVRTKAFPNPLKAF 661

Query: 1036 QALAQIWNHPGIL 1048
                +IWNHP +L
Sbjct: 662  AVCCKIWNHPDVL 674



 Score =  140 bits (353), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/131 (52%), Positives = 90/131 (68%), Gaps = 3/131 (2%)

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG T S ER++LV  FN   N  VK  LISTRAGSLGINL  ANRVII D SWNP +D
Sbjct: 919  RLDGSTSSQERERLVNEFNA--NTSVKLFLISTRAGSLGINLTGANRVIIFDASWNPCHD 976

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
             QA+YR +RYGQTKP F YR++    +E+KIY RQ+ K+G++ R+VD       +S +++
Sbjct: 977  TQAVYRIYRYGQTKPCFVYRIVMDKCLEKKIYDRQIKKQGMSDRIVDECNPEAHLSMKDI 1036

Query: 1295 LHL-FEFGDDE 1304
             +L  ++  DE
Sbjct: 1037 TNLCHDYDSDE 1047


>gi|170028154|ref|XP_001841961.1| steroid receptor-interacting snf2 domain protein [Culex
            quinquefasciatus]
 gi|167871786|gb|EDS35169.1| steroid receptor-interacting snf2 domain protein [Culex
            quinquefasciatus]
          Length = 1278

 Score =  288 bits (736), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 150/384 (39%), Positives = 222/384 (57%), Gaps = 47/384 (12%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            ++NV   +GEE + +   I+  +K HQ+ G+RF+++NII+SI +  +   G GCILAH+M
Sbjct: 636  VINVGHAEGEEDIFLAPQIARIIKPHQIGGVRFLFDNIIESIERYDTS-TGFGCILAHSM 694

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP-----------SE 810
            GLGKT Q++ F    +R  +   +T LI+ P+N L NW  EF  W P            E
Sbjct: 695  GLGKTLQLVCFSDIFLRHTSS--KTVLIIMPINTLQNWLNEFNTWLPEDPESSPLKNHGE 752

Query: 811  LKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLS-------------- 852
            ++P   ++F+L D  +    RA+++ +W   GGV LIGY  +R LS              
Sbjct: 753  VRPRNFKIFILNDSHKTLKSRAKVVLEWAKNGGVLLIGYEMYRLLSQKKMTKKKKKKKGE 812

Query: 853  -------FGKHVKDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRR 904
                        + +NM  EI  AL + GPD++VCDE H IKN+ A  + ALKQ+K +RR
Sbjct: 813  PEVKEEEKESTEEQKNMFDEIHEALVKPGPDLVVCDEGHRIKNSHASISVALKQIKSKRR 872

Query: 905  IALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQR 964
            + LTG PLQNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R
Sbjct: 873  VVLTGYPLQNNLLEYWCMVDFVRPNYLGTKTEFSNMFERPIQNGQCIDSTPQDIKLMRYR 932

Query: 965  SHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSN 1024
            +H+L+  L GFVQR   +V++  LP K  +V+ +++S  QR+LY  F+       + V  
Sbjct: 933  AHVLHSLLLGFVQRRSHSVLQTSLPQKEEYVMLIRMSEFQRKLYTVFM-------NEVVR 985

Query: 1025 EKIRKSFFAGYQALAQIWNHPGIL 1048
             K   +    +    +IWNHP +L
Sbjct: 986  TKAVPNPLKAFAVCCKIWNHPDVL 1009


>gi|62484263|ref|NP_611885.3| CG4049 [Drosophila melanogaster]
 gi|61678334|gb|AAF47165.3| CG4049 [Drosophila melanogaster]
          Length = 1669

 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 151/373 (40%), Positives = 218/373 (58%), Gaps = 37/373 (9%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN+   +GEE + +   I+  +K HQ+ G+RF+++NII+S R+      G GCILAH+M
Sbjct: 369  VVNMAHPEGEETLYLAPQIAKVIKPHQIGGVRFLYDNIIESTRRYNKSS-GFGCILAHSM 427

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP-----SELKP--L 814
            GLGKT QV++F    +R  +   +T L V P+N L NW  EF  W P     S ++P   
Sbjct: 428  GLGKTLQVVSFCDIFLR--HTSAKTVLCVMPINTLQNWLSEFNMWIPRYSTDSNVRPRNF 485

Query: 815  RVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR------------ 860
             +F+L D  +    RA+++  W   GGV LIGY  FR L+  K VK R            
Sbjct: 486  DIFVLNDQQKTLTARAKVILNWVHDGGVLLIGYELFRLLAL-KLVKTRKRKGSVIRPDGM 544

Query: 861  ----NMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNN 915
                ++   +  AL + GPD+++CDE H IKN+ A  + ALK+++ +RRI LTG PLQNN
Sbjct: 545  DSSSDLMNLVYEALVKPGPDLVICDEGHRIKNSHAGISLALKEIRTRRRIVLTGYPLQNN 604

Query: 916  LMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF 975
            L+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R+H+L+  L GF
Sbjct: 605  LLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLGF 664

Query: 976  VQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY 1035
            VQR    V++  LP K  +VI VK++  QR+LY  F+         V   K   +    +
Sbjct: 665  VQRRSHTVLQLTLPQKYEYVILVKMTAFQRKLYDTFM-------TDVVRTKAFPNPLKAF 717

Query: 1036 QALAQIWNHPGIL 1048
                +IWNHP +L
Sbjct: 718  AVCCKIWNHPDVL 730



 Score =  189 bits (479), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/232 (44%), Positives = 141/232 (60%), Gaps = 6/232 (2%)

Query: 1087 FLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPT 1146
             L+ K  +  F   W  DL+  +    +  S KM +   IL    N+GD+ L+FSQS+ T
Sbjct: 930  LLKSKQRNEEFSCSWAVDLMKNYVSGLISNSPKMEIFFCILKESLNLGDRILLFSQSLLT 989

Query: 1147 LDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIS 1206
            L+L+E YL     PG   +LW K   ++RLDG T S ER++LV  FN   N  VK  LIS
Sbjct: 990  LNLLEVYLKSSYVPG-SNQLWTKNSSYFRLDGSTSSQERERLVNEFNA--NSNVKLFLIS 1046

Query: 1207 TRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIY 1266
            TRAGSLGINL  ANRVII D SWNP +D QA+YR +RYGQTKP F YR++    +E+KIY
Sbjct: 1047 TRAGSLGINLTGANRVIIFDASWNPCHDTQAVYRIYRYGQTKPCFVYRIVMDRCLEKKIY 1106

Query: 1267 KRQVTKEGLAARVVDRQQVHRTISKEEMLHLFE-FGDDENPDPLTAVSKENG 1317
             RQ+ K+G++ R+VD       +S +++ +L + +  DE  D +  V+K  G
Sbjct: 1107 DRQIKKQGMSDRIVDECNPEAHLSMKDITNLCQDYDSDE--DTVEEVNKSTG 1156


>gi|312381991|gb|EFR27590.1| hypothetical protein AND_05623 [Anopheles darlingi]
          Length = 1634

 Score =  287 bits (735), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 150/387 (38%), Positives = 223/387 (57%), Gaps = 50/387 (12%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            ++NV    GE+ + +   I+  +K HQ+ G+RF+++NII+SI +  S   G GCILAH+M
Sbjct: 792  VINVGHADGEQDIFLAPQIARIIKPHQIGGVRFLFDNIIESIERYDS-STGFGCILAHSM 850

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP-----------SE 810
            GLGKT Q++ F    +R  +   +T L++ P+N L NW  EF  W P            E
Sbjct: 851  GLGKTLQLVCFCDIFLRHTSS--KTVLVIMPINTLQNWLNEFNTWLPEDATNSPLRNHGE 908

Query: 811  LKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLS-------------- 852
            ++P   R+F+L D  +    RA+++ +W   GGV LIGY  +R LS              
Sbjct: 909  VRPRNFRIFILNDSHKTLKSRAKVVLEWAKNGGVLLIGYEMYRLLSQKKMTKKKKKKKKG 968

Query: 853  ----------FGKHVKDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKC 901
                           + R+M  +I  AL + GPD++VCDE H IKN+ A  + ALKQ+K 
Sbjct: 969  GVLVEVEEEEKESTEEQRSMFDDIHEALVKPGPDLVVCDEGHRIKNSHASISVALKQIKS 1028

Query: 902  QRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 961
            +RRI LTG PLQNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M
Sbjct: 1029 KRRIVLTGYPLQNNLLEYWCMVDFVRPNYLGTKTEFSNMFERPIQNGQCIDSTPQDIKLM 1088

Query: 962  NQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDR 1021
              R+H+L+  L GFVQR   +V++  LP K  +V+ ++++  QR+LY  F+      N+ 
Sbjct: 1089 RYRAHVLHSLLLGFVQRRSHSVLQTSLPQKEEYVLQIRMTEFQRKLYTVFM------NEV 1142

Query: 1022 VSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            V  + +     A +    +IWNHP +L
Sbjct: 1143 VRTKAVPNPLKA-FAVCCKIWNHPDVL 1168


>gi|427785325|gb|JAA58114.1| Putative helicase arip4 [Rhipicephalus pulchellus]
          Length = 1704

 Score =  287 bits (734), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 156/400 (39%), Positives = 232/400 (58%), Gaps = 53/400 (13%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            D++   +VNV     +  V +   ++  +K HQ+ GIRF+++N+++S+ +  +   G GC
Sbjct: 688  DSMGRVLVNVGHPPEDSDVFLAPQLAPIVKPHQIGGIRFLFDNVVESVSRFDT-SSGFGC 746

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ 809
            ILAH+MGLGKT QVI+F+   +R  +   R  L +TP+N + NW  EF KW P+      
Sbjct: 747  ILAHSMGLGKTIQVISFVDVLLR--HTAARKVLCITPINTIQNWLAEFDKWVPAPEAVPQ 804

Query: 810  ------ELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD 859
                  +++P    V++L D+ R    RAEL+  W  KGGV L+GY  +R L+  K V+ 
Sbjct: 805  NLVDSGQVRPRSYHVYLLNDMYRSTPARAELILDWHKKGGVLLMGYEMYRMLALKKVVRP 864

Query: 860  RNMAR---------------------EICHAL-QDGPDILVCDEAHMIKNTRADTTQALK 897
                R                     +I  A+   GPD+++CDE H IKN  A T+ ALK
Sbjct: 865  SKRRRSPKKEDLSVPEDESRHSQLLDDIYQAIVNPGPDLVICDEGHRIKNCNASTSTALK 924

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             ++ +RRI LTG PLQNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D
Sbjct: 925  SIRTKRRIVLTGYPLQNNLLEYWCMVDFVRPAYLGTRSEFCNMFERPIQNGQCLDSTPKD 984

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD--LH 1015
             ++M  R+H+L+  L+GFVQR    V++  LP K   V+ ++++P+QR LY+ F+   LH
Sbjct: 985  RQLMRFRAHVLHSLLQGFVQRRGHAVLRDALPRKEEHVLLIRMTPIQRTLYREFVKEFLH 1044

Query: 1016 GFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDK 1054
             +   RV+N      FFA      ++WNHP IL  L +DK
Sbjct: 1045 NY---RVTNP---LKFFA---VCCKVWNHPDILFHLVQDK 1075



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/217 (41%), Positives = 138/217 (63%), Gaps = 6/217 (2%)

Query: 1094 DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFY 1153
            D     +W   L+ ++    LD S K ++L+ I+     +GDK LVFSQS+ TLDL+E +
Sbjct: 1189 DNNISYEWAYPLMEKYLPDMLDNSYKFLVLMTIVEQTLGVGDKLLVFSQSLSTLDLVERF 1248

Query: 1154 LSK--LP-RPG-KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            LS+  +P RPG   G+ W +GK+++RLDG T + ER+KL+  +N   N+ V   L+STRA
Sbjct: 1249 LSRREVPLRPGLPHGEKWMRGKNYFRLDGSTSAQEREKLINEYN--CNQAVSLFLLSTRA 1306

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LGINL  ANR++++D SWNP +D QA+ R +RYGQ K    YRL+    +E++IY RQ
Sbjct: 1307 GCLGINLTGANRIVVLDASWNPCHDAQAVCRIYRYGQAKQCHIYRLVCDNCLEKRIYDRQ 1366

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENP 1306
            V K+G++ RVVD       ++ +++  L +  +D+ P
Sbjct: 1367 VNKQGMSDRVVDEMNPEANLTWKDVSTLVQDNEDDPP 1403


>gi|427780225|gb|JAA55564.1| Putative helicase arip4 [Rhipicephalus pulchellus]
          Length = 1728

 Score =  287 bits (734), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 156/400 (39%), Positives = 232/400 (58%), Gaps = 53/400 (13%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            D++   +VNV     +  V +   ++  +K HQ+ GIRF+++N+++S+ +  +   G GC
Sbjct: 712  DSMGRVLVNVGHPPEDSDVFLAPQLAPIVKPHQIGGIRFLFDNVVESVSRFDT-SSGFGC 770

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ 809
            ILAH+MGLGKT QVI+F+   +R  +   R  L +TP+N + NW  EF KW P+      
Sbjct: 771  ILAHSMGLGKTIQVISFVDVLLR--HTAARKVLCITPINTIQNWLAEFDKWVPAPEAVPQ 828

Query: 810  ------ELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD 859
                  +++P    V++L D+ R    RAEL+  W  KGGV L+GY  +R L+  K V+ 
Sbjct: 829  NLVDSGQVRPRSYHVYLLNDMYRSTPARAELILDWHKKGGVLLMGYEMYRMLALKKVVRP 888

Query: 860  RNMAR---------------------EICHAL-QDGPDILVCDEAHMIKNTRADTTQALK 897
                R                     +I  A+   GPD+++CDE H IKN  A T+ ALK
Sbjct: 889  SKRRRSPKKEDLSVPEDESRHSQLLDDIYQAIVNPGPDLVICDEGHRIKNCNASTSTALK 948

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             ++ +RRI LTG PLQNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D
Sbjct: 949  SIRTKRRIVLTGYPLQNNLLEYWCMVDFVRPAYLGTRSEFCNMFERPIQNGQCLDSTPKD 1008

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD--LH 1015
             ++M  R+H+L+  L+GFVQR    V++  LP K   V+ ++++P+QR LY+ F+   LH
Sbjct: 1009 RQLMRFRAHVLHSLLQGFVQRRGHAVLRDALPRKEEHVLLIRMTPIQRTLYREFVKEFLH 1068

Query: 1016 GFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDK 1054
             +   RV+N      FFA      ++WNHP IL  L +DK
Sbjct: 1069 NY---RVTNP---LKFFA---VCCKVWNHPDILFHLVQDK 1099



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/217 (41%), Positives = 138/217 (63%), Gaps = 6/217 (2%)

Query: 1094 DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFY 1153
            D     +W   L+ ++    LD S K ++L+ I+     +GDK LVFSQS+ TLDL+E +
Sbjct: 1213 DNNISYEWAYPLMEKYLPDMLDNSYKFLVLMTIVEQTLGVGDKLLVFSQSLSTLDLVERF 1272

Query: 1154 LSK--LP-RPG-KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            LS+  +P RPG   G+ W +GK+++RLDG T + ER+KL+  +N   N+ V   L+STRA
Sbjct: 1273 LSRREVPLRPGLPHGEKWMRGKNYFRLDGSTSAQEREKLINEYN--CNQAVSLFLLSTRA 1330

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LGINL  ANR++++D SWNP +D QA+ R +RYGQ K    YRL+    +E++IY RQ
Sbjct: 1331 GCLGINLTGANRIVVLDASWNPCHDAQAVCRIYRYGQAKQCHIYRLVCDNCLEKRIYDRQ 1390

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENP 1306
            V K+G++ RVVD       ++ +++  L +  +D+ P
Sbjct: 1391 VNKQGMSDRVVDEMNPEANLTWKDVSTLVQDNEDDPP 1427


>gi|158285422|ref|XP_564675.3| AGAP007573-PA [Anopheles gambiae str. PEST]
 gi|157019984|gb|EAL41756.3| AGAP007573-PA [Anopheles gambiae str. PEST]
          Length = 2705

 Score =  287 bits (734), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 152/384 (39%), Positives = 224/384 (58%), Gaps = 47/384 (12%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            ++NV    GEE + +   I+  +K HQ+ G+RF+++NII+SI +  S   G GCILAH+M
Sbjct: 723  VINVGHTDGEEDIFLAPQIARIIKPHQIGGVRFLFDNIIESIERYDS-STGFGCILAHSM 781

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP-----------SE 810
            GLGKT Q++ F    +R  +   +T LI+ P+N L NW  EF  W P            E
Sbjct: 782  GLGKTLQLVCFCDIFLRHTSS--KTVLIIMPINTLQNWLNEFNTWLPEDADNSPLRNHGE 839

Query: 811  LKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLS-----------FGK 855
            ++P   R+ +L D  +    R++++ +W   GGV LIGY  +R LS            G 
Sbjct: 840  VRPRNFRIHILNDSHKTLKSRSKVVLEWARNGGVLLIGYEMYRLLSQKKMTKKKKKKKGV 899

Query: 856  HVK----------DRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRR 904
             V+           RNM  +I  AL + GPD++VCDE H IKN+ A  + ALKQ+K +RR
Sbjct: 900  AVELEEEKESTEEQRNMFDDIHEALVKPGPDLVVCDEGHRIKNSHASISVALKQIKSKRR 959

Query: 905  IALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQR 964
            + LTG PLQNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R
Sbjct: 960  VVLTGYPLQNNLLEYWCMVDFVRPNYLGTKTEFSNMFERPIQNGQCIDSTPQDIKLMRYR 1019

Query: 965  SHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSN 1024
            +H+L+  L GFVQR   +V++  LP K  +V+ ++++  QR+LY  F+      N+ V  
Sbjct: 1020 AHVLHSLLLGFVQRRSHSVLQTSLPQKEEYVLLIRMTEFQRKLYSVFM------NEVVRT 1073

Query: 1025 EKIRKSFFAGYQALAQIWNHPGIL 1048
            + +     A +    +IWNHP +L
Sbjct: 1074 KAVPNPLKA-FAVCCKIWNHPDVL 1096



 Score =  169 bits (428), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/216 (42%), Positives = 131/216 (60%), Gaps = 4/216 (1%)

Query: 1089 QGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLD 1148
            +GK+       +W  +L+  +    L+ S KM +   IL     +GD+ LVFSQS+ TL+
Sbjct: 1500 KGKDAKDEIPYEWAFELMKGYIPDLLENSPKMDIFFCILEESIRLGDRLLVFSQSLLTLN 1559

Query: 1149 LIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTR 1208
            LIE +L     PG +   W K   ++RLDG T + ER+KL+  FN   N  V   L+STR
Sbjct: 1560 LIERFLQHNKIPGTE-NYWAKNISYFRLDGSTVAQEREKLINEFNS--NPNVHLFLVSTR 1616

Query: 1209 AGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKR 1268
            AGSLGINL  ANRV++ D SWNP +D QA+ R +RYGQ KP F YRL+    +E+KIY R
Sbjct: 1617 AGSLGINLVGANRVVVFDASWNPCHDTQAVCRVYRYGQKKPCFVYRLVMDNCLEKKIYDR 1676

Query: 1269 QVTKEGLAARVVDRQQVHRTISKEEMLHL-FEFGDD 1303
            Q+ K+G++ R+VD       +S +E+  L ++ G+D
Sbjct: 1677 QINKQGMSDRIVDECNPDAHLSMKEITSLCYDDGED 1712


>gi|189240994|ref|XP_968321.2| PREDICTED: similar to steroid receptor-interacting snf2 domain
            protein [Tribolium castaneum]
          Length = 1784

 Score =  286 bits (733), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 152/380 (40%), Positives = 216/380 (56%), Gaps = 43/380 (11%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            + N+   + E  + +   I+  +K HQ+ G+RF+++N+I+S  + +S   G GCILAH+M
Sbjct: 375  VANIGHPENEPDLFLAPQIARIIKPHQIGGVRFLYDNVIESTSRFESS-TGFGCILAHSM 433

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE----LKPLRVF 817
            GLGKT QV+ F    +R  +   +T L + P+N L NW  EF  W P+E      PL V 
Sbjct: 434  GLGKTLQVVCFSDIFLR--HTPAKTILCIMPINTLQNWMAEFNMWLPTEEAVATSPLTVH 491

Query: 818  -----------MLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN--- 861
                       +L D  +    R +++  W+A GGV LIGY  FR LS  KH K R    
Sbjct: 492  GEVRPRKFNLHVLNDSHKTLAARHKVIKAWKAGGGVLLIGYEQFRLLSLRKHPKSRRKPL 551

Query: 862  ------------MAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALT 908
                        +  EI  AL + GPD+++CDE H IKN+ A  +QALKQ++ +RR+ LT
Sbjct: 552  VAEPADDDSNKPLFDEIHEALVKPGPDLVICDEGHRIKNSHASISQALKQMRTKRRVVLT 611

Query: 909  GSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHIL 968
            G PLQNNLMEY+CMVDFVR  +LGS  EF N F+ PI NGQ  +ST  D+K+M  R+H+L
Sbjct: 612  GYPLQNNLMEYWCMVDFVRPNYLGSKTEFCNMFERPIMNGQCIDSTEADIKLMRYRAHVL 671

Query: 969  YEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIR 1028
            +  L GFVQR    V++  LP K  +V+ V++ P QR+LY+ F+       D V   +  
Sbjct: 672  HSLLVGFVQRRSHAVLQTTLPQKEEYVLLVRMLPFQRKLYETFM-------DEVVRSQAV 724

Query: 1029 KSFFAGYQALAQIWNHPGIL 1048
             +    +    +IWNHP +L
Sbjct: 725  PNPLKAFAVCCKIWNHPDVL 744



 Score =  178 bits (452), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/189 (47%), Positives = 123/189 (65%), Gaps = 3/189 (1%)

Query: 1093 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEF 1152
            +D     DW  +LL ++    ++ S KM +L  I+     +GD+ LVFSQS+ TLDLIE 
Sbjct: 1024 EDSGIPYDWAIELLKDYVPGRIENSAKMEILFCIIRESIALGDRLLVFSQSLITLDLIEQ 1083

Query: 1153 YLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            +L     PG   K W +  ++YRLDG T + ER+KL+  FN   N ++   L+STRAGSL
Sbjct: 1084 FLQMNVVPGDTQK-WCRNTNYYRLDGSTSALEREKLINEFNS--NPKIHVFLVSTRAGSL 1140

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            GINL  ANRV+++D SWNP +D QA+ R +RYGQ KP F YRL+    +E+KIY RQ+ K
Sbjct: 1141 GINLIGANRVVVLDASWNPCHDTQAVCRVYRYGQRKPCFVYRLVVDNCLEKKIYDRQINK 1200

Query: 1273 EGLAARVVD 1281
            +G++ RVVD
Sbjct: 1201 QGMSDRVVD 1209


>gi|195489519|ref|XP_002092773.1| GE11484 [Drosophila yakuba]
 gi|194178874|gb|EDW92485.1| GE11484 [Drosophila yakuba]
          Length = 1671

 Score =  286 bits (733), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 150/373 (40%), Positives = 216/373 (57%), Gaps = 37/373 (9%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN+   +GEE + +   I+  +K HQ+ G+RF+++NII+S R+      G GCILAH+M
Sbjct: 359  VVNMAHPEGEETLYLAPQIAKVIKPHQIGGVRFLYDNIIESTRRYNKSS-GFGCILAHSM 417

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS-------ELKPL 814
            GLGKT QV++F    +R  +   +T L V P+N L NW  EF  W P          +  
Sbjct: 418  GLGKTLQVVSFCDIFLR--HTSAKTVLCVMPINTLQNWLSEFNMWVPRYSADGNVRARNF 475

Query: 815  RVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR------------ 860
             +F+L D  +    RA+++  W  +GGV LIGY  FR L+  K VK R            
Sbjct: 476  DIFVLNDQQKTLTARAKVILNWVHEGGVLLIGYELFRLLAL-KLVKTRKRKGSVIRPDGM 534

Query: 861  ----NMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNN 915
                ++   +  AL + GPD+++CDE H IKN+ A  + ALKQ++ +RRI LTG PLQNN
Sbjct: 535  DSSSDLMNLVYEALVKPGPDLVICDEGHRIKNSHAGISLALKQIRTRRRIVLTGYPLQNN 594

Query: 916  LMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF 975
            L+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R+H+L+  L GF
Sbjct: 595  LLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLGF 654

Query: 976  VQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY 1035
            VQR    V++  LP K  +VI VK++  QR+LY  F+         V   K   +    +
Sbjct: 655  VQRRSHTVLQLTLPQKYEYVILVKMTAFQRKLYDTFM-------TDVVRTKAFPNPLKAF 707

Query: 1036 QALAQIWNHPGIL 1048
                +IWNHP +L
Sbjct: 708  AVCCKIWNHPDVL 720



 Score =  186 bits (472), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 102/232 (43%), Positives = 140/232 (60%), Gaps = 6/232 (2%)

Query: 1087 FLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPT 1146
             L+ K  +  F   W  DL+  +    +  S KM +   IL     +GD+ L+FSQS+ T
Sbjct: 920  LLKSKQRNDEFSCSWAVDLMKNYVSGLISNSPKMEIFFCILKESLQLGDRILLFSQSLLT 979

Query: 1147 LDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIS 1206
            L+L+E YL     PG   +LW K   ++RLDG T S ER++LV  FN   N  VK  LIS
Sbjct: 980  LNLLEVYLKSSYVPG-SNQLWTKNSSYFRLDGSTSSQERERLVNEFNA--NGNVKLFLIS 1036

Query: 1207 TRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIY 1266
            TRAGSLGINL  ANRVII D SWNP +D QA+YR +RYGQTKP F YR++    +E+KIY
Sbjct: 1037 TRAGSLGINLTGANRVIIFDASWNPCHDTQAVYRIYRYGQTKPCFVYRIVMDRCLEKKIY 1096

Query: 1267 KRQVTKEGLAARVVDRQQVHRTISKEEMLHL-FEFGDDENPDPLTAVSKENG 1317
             RQ+ K+G++ R+VD       +S +++ +L  ++  DE  D +  V+K  G
Sbjct: 1097 DRQIKKQGMSDRIVDECNPEAHLSMKDITNLCHDYDSDE--DTVEEVNKSAG 1146


>gi|322701620|gb|EFY93369.1| SNF2 family helicase/ATPase [Metarhizium acridum CQMa 102]
          Length = 1677

 Score =  286 bits (733), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 195/603 (32%), Positives = 301/603 (49%), Gaps = 78/603 (12%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQS--IRKVKSGDKGLGCILAH 759
            I+N  ++  +  + I + I  ++K HQ+ G+RFMW  IIQ   +R+        GC+L+H
Sbjct: 770  IINESKQDDQSFIYINNEIGTRIKDHQINGVRFMWNQIIQDPELRQ--------GCLLSH 821

Query: 760  TMGLGKTFQVIAFLYTAMRSV-------------NLGLRTALIVTPVNVLHNWKQEFMKW 806
            +MGLGKT QVI  L     S              +L     L+  P  +++NW  E + W
Sbjct: 822  SMGLGKTMQVITLLVAIQESSKSSDQSIVSQIPEDLRRSKTLVTCPAGLVNNWVDEILTW 881

Query: 807  RPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
                +      +   +S + R  ++ +W   GGV +IGY   R +S  +  K R+M    
Sbjct: 882  DTDRILGDLHVIDSTLSIEDRLSVVQEWSQTGGVLVIGYPMLRKVSL-ELDKGRSML--- 937

Query: 867  CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              ++ D P+I++ DEAH +KN ++       + +   RIA+TGSPL NN+ EYY M+++V
Sbjct: 938  --SIFDEPNIVIADEAHTLKNPKSKLHLVCSRFRATSRIAMTGSPLANNIEEYYFMINWV 995

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV-VK 985
               FLG   EFR  + NPI++G    S+  D +   ++   L + +   V R  M   ++
Sbjct: 996  APNFLGPVEEFREIYSNPIQHGVDKGSSGVDKRKALKKLEALKQIVSPKVHRATMKTCMQ 1055

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWN 1043
            KDLPPK  FV+ VK  PLQ +LY  F   + G +   +  E +++ + F     L  + N
Sbjct: 1056 KDLPPKQEFVLCVKPKPLQVKLYNLFAQVIRGESVGDIQGEAELQGAVFRVTNDLTLLCN 1115

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP          Y    +++DS   ++         KPR              F      
Sbjct: 1116 HPYAF-------YEKAIESQDSHKTKS---------KPR------------AGFPPSIIP 1147

Query: 1104 DLLHEHTYKEL---DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
             +L E    E      S K+ LL+ IL       DK LVFS SIPTL+    YLSKL   
Sbjct: 1148 AVLAEFAGVEARCPSLSTKIELLIQILDDAKRSKDKVLVFSHSIPTLN----YLSKL--- 1200

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
                   ++ + + RLDG T  ++RQ  +++FN     + +  LISTRAG +G+N+  AN
Sbjct: 1201 -----FQEQKRCFSRLDGGTPIAKRQDEIKKFNA---NQTELYLISTRAGGVGLNIQGAN 1252

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            +V+I+D  WNP ++ QAI R++R GQ+KPV  Y  +  GT E+ ++ R + K  LA RVV
Sbjct: 1253 KVVILDSKWNPVHEQQAIGRSYRIGQSKPVSVYYFVTAGTFEQDLHGRAIFKTQLATRVV 1312

Query: 1281 DRQ 1283
            D++
Sbjct: 1313 DKK 1315


>gi|427798055|gb|JAA64479.1| Putative helicase arip4, partial [Rhipicephalus pulchellus]
          Length = 1662

 Score =  286 bits (732), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 157/400 (39%), Positives = 232/400 (58%), Gaps = 53/400 (13%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            D++   +VNV     +  V +   ++  +K HQ+ GIRF+++N+++S+ +  +   G GC
Sbjct: 712  DSMGRVLVNVGHPPEDSDVFLAPQLAPIVKPHQIGGIRFLFDNVVESVSRFDT-SSGFGC 770

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ 809
            ILAH+MGLGKT QVI+F+   +R  +   R  L +TP+N + NW  EF KW P+      
Sbjct: 771  ILAHSMGLGKTIQVISFVDVLLR--HTAARKVLCITPINTIQNWLAEFDKWVPAPEAVPQ 828

Query: 810  ------ELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD 859
                  +++P    V++L D+ R    RAEL+  W  KGGV L+GY  +R L+  K V+ 
Sbjct: 829  NLVDSGQVRPRSYHVYLLNDMYRSTPARAELILDWHKKGGVLLMGYEMYRMLALKKVVRP 888

Query: 860  RNMAR---------------------EICHAL-QDGPDILVCDEAHMIKNTRADTTQALK 897
                R                     +I  A+   GPD+++CDE H IKN  A T+ ALK
Sbjct: 889  SKRRRSPKKEDLSVPEDESRHSQLLDDIYQAIVNPGPDLVICDEGHRIKNCNASTSTALK 948

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             ++ +RRI LTG PLQNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D
Sbjct: 949  SIRTKRRIVLTGYPLQNNLLEYWCMVDFVRPAYLGTRSEFCNMFERPIQNGQCLDSTPKD 1008

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD--LH 1015
             ++M  R+H+L+  L+GFVQR    V++  LP K   V+ ++++P+QR LY+ F+   LH
Sbjct: 1009 RQLMRFRAHVLHSLLQGFVQRRGHAVLRDALPRKEEHVLLIRMTPIQRTLYREFVKEFLH 1068

Query: 1016 GFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDK 1054
               N RV+N      FFA      ++WNHP IL  L +DK
Sbjct: 1069 ---NYRVTNP---LKFFA---VCCKVWNHPDILFHLVQDK 1099



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/241 (37%), Positives = 138/241 (57%), Gaps = 30/241 (12%)

Query: 1094 DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFY 1153
            D     +W   L+ ++    LD S K ++L+ I+     +GDK LVFSQS+ TLDL+E +
Sbjct: 1213 DNNISYEWAYPLMEKYLPDMLDNSYKFLVLMTIVEQTLGVGDKLLVFSQSLSTLDLVERF 1272

Query: 1154 LSK--LP-RPG-KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            LS+  +P RPG   G+ W +GK+++RLDG T + ER+KL+  +N   N+ V   L+STRA
Sbjct: 1273 LSRREVPLRPGLPHGEKWMRGKNYFRLDGSTSAQEREKLINEYN--CNQAVSLFLLSTRA 1330

Query: 1210 GSLGINLHSANRVIIVDGSWNPTY------------------------DLQAIYRAWRYG 1245
            G LGINL  ANR++++D SWNP +                        D QA+ R +RYG
Sbjct: 1331 GCLGINLTGANRIVVLDASWNPCHDAQAVCRIYRYGQAXXXXSWNPCHDAQAVCRIYRYG 1390

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            Q K    YRL+    +E++IY RQV K+G++ RVVD       ++ +++  L +  +D+ 
Sbjct: 1391 QAKQCHIYRLVCDNCLEKRIYDRQVNKQGMSDRVVDEMNPEANLTWKDVSTLVQDNEDDP 1450

Query: 1306 P 1306
            P
Sbjct: 1451 P 1451


>gi|380477217|emb|CCF44275.1| SNF2 super family protein [Colletotrichum higginsianum]
          Length = 1814

 Score =  286 bits (732), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 198/615 (32%), Positives = 304/615 (49%), Gaps = 82/615 (13%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            I+N  +E  +  + +   I  ++K HQ+ G+RFMW  I+    KV+ G     C+LAHTM
Sbjct: 880  IINETKEDNQGLIYVNEDIGKRIKNHQIDGVRFMWNQIVYH-SKVRQG-----CLLAHTM 933

Query: 762  GLGKTFQVIAFLYT---AMRSVNLGLRT----------ALIVTPVNVLHNWKQEFMKWRP 808
            GLGKT QVI  L     + +S +  +R+           L++ P  ++ NW  E + W P
Sbjct: 934  GLGKTMQVITLLVAIAESAQSQDASIRSQIPEDLRQSKTLVLCPSVLVDNWMDELLMWAP 993

Query: 809  SELKPLRVFMLEDVSR-DRRAELLAKWRAKGGVFLIGYTAFRNL--SFGKHVKDRNMARE 865
              L   R+F LE ++R   R  ++  W  +GGV ++GY  F+ L             A+ 
Sbjct: 994  DGLLG-RLFKLEAITRAPERGPMIRTWDEEGGVLIVGYDMFKRLIDPPTNEFPPPADAKS 1052

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            +   L   P++++ DEAH +KN  +  + A  Q + Q RIALTGSPL N+++E++ M+D+
Sbjct: 1053 VKDILTQSPNLVIADEAHKLKNPESKLSMAAAQFRTQSRIALTGSPLANSVLEFFYMIDW 1112

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
            V  G+LG   EF+  +  PI+ G + +S+    +   +   +L   +     R  +  + 
Sbjct: 1113 VAPGYLGPLSEFKACYAEPIQAGLYEDSSRSAYRKAKKALAVLEATVAPKTNRATIQSIL 1172

Query: 986  KD-LPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRK-------SFFAGYQA 1037
            +D LPPK  FV+TV L+ LQ +LY  FL            E +RK               
Sbjct: 1173 QDGLPPKKEFVLTVPLTSLQAKLYDSFL------------ESLRKEELGLGGKILGAVSN 1220

Query: 1038 LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
               I NHP        K + +R   E     +    N+ +  +   +++ L+        
Sbjct: 1221 FCLIANHP--------KAFETRLREECKLLQKRDKANLTLTSQ--IISEGLKITK----L 1266

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
            QKD  + +L          S K+ LL+ IL     +GDK LVF+QSIPT+D    YL  L
Sbjct: 1267 QKDMSSHVL----------SWKVQLLVAILDQSEKVGDKVLVFTQSIPTMD----YLDSL 1312

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
             R        ++ +   RLDG T  S RQ+ ++ FN   N      LIST AG  G+N++
Sbjct: 1313 FR--------QQRRKIARLDGNTPISIRQQNIKDFN---NGDSHLYLISTAAGGTGLNIY 1361

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRV+I D  +NP ++ QAI RA+R GQ K V+ Y  ++ GT E+ ++ + V K  LA+
Sbjct: 1362 GANRVVIFDFKYNPIHEQQAIGRAYRIGQQKQVYVYTFISGGTYEQAMHNKAVFKTQLAS 1421

Query: 1278 RVVDRQQVHRTISKE 1292
            RVVD +   R   KE
Sbjct: 1422 RVVDNENPKRWSKKE 1436


>gi|427780017|gb|JAA55460.1| Putative helicase arip4 [Rhipicephalus pulchellus]
          Length = 1673

 Score =  286 bits (732), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 157/400 (39%), Positives = 232/400 (58%), Gaps = 53/400 (13%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            D++   +VNV     +  V +   ++  +K HQ+ GIRF+++N+++S+ +  +   G GC
Sbjct: 712  DSMGRVLVNVGHPPEDSDVFLAPQLAPIVKPHQIGGIRFLFDNVVESVSRFDT-SSGFGC 770

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ 809
            ILAH+MGLGKT QVI+F+   +R  +   R  L +TP+N + NW  EF KW P+      
Sbjct: 771  ILAHSMGLGKTIQVISFVDVLLR--HTAARKVLCITPINTIQNWLAEFDKWVPAPEAVPQ 828

Query: 810  ------ELKP--LRVFMLEDVSRDR--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD 859
                  +++P    V++L D+ R    RAEL+  W  KGGV L+GY  +R L+  K V+ 
Sbjct: 829  NLVDSGQVRPRSYHVYLLNDMYRSTPARAELILDWHKKGGVLLMGYEMYRMLALKKVVRP 888

Query: 860  RNMAR---------------------EICHAL-QDGPDILVCDEAHMIKNTRADTTQALK 897
                R                     +I  A+   GPD+++CDE H IKN  A T+ ALK
Sbjct: 889  SKRRRSPKKEDLSVPEDESRHSQLLDDIYQAIVNPGPDLVICDEGHRIKNCNASTSTALK 948

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             ++ +RRI LTG PLQNNL+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D
Sbjct: 949  SIRTKRRIVLTGYPLQNNLLEYWCMVDFVRPAYLGTRSEFCNMFERPIQNGQCLDSTPKD 1008

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD--LH 1015
             ++M  R+H+L+  L+GFVQR    V++  LP K   V+ ++++P+QR LY+ F+   LH
Sbjct: 1009 WQLMRFRAHVLHSLLQGFVQRRGHAVLRDALPRKEEHVLLIRMTPIQRTLYREFVKEFLH 1068

Query: 1016 GFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDK 1054
               N RV+N      FFA      ++WNHP IL  L +DK
Sbjct: 1069 ---NYRVTNP---LKFFA---VCCKVWNHPDILFHLVQDK 1099



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/217 (41%), Positives = 138/217 (63%), Gaps = 6/217 (2%)

Query: 1094 DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFY 1153
            D     +W   L+ ++    LD S K ++L+ I+     +GDK LVFSQS+ TLDL+E +
Sbjct: 1213 DNNISYEWAYPLMEKYLPDMLDNSYKFLVLMTIVEQTLGVGDKLLVFSQSLSTLDLVERF 1272

Query: 1154 LSK--LP-RPG-KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            LS+  +P RPG   G+ W +GK+++RLDG T + ER+KL+  +N   N+ V   L+STRA
Sbjct: 1273 LSRREVPLRPGLPHGEKWMRGKNYFRLDGSTSAQEREKLINEYN--CNQAVSLFLLSTRA 1330

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LGINL  ANR++++D SWNP +D QA+ R +RYGQ K    YRL+    +E++IY RQ
Sbjct: 1331 GCLGINLTGANRIVVLDASWNPCHDAQAVCRIYRYGQAKQCHIYRLVCDNCLEKRIYDRQ 1390

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENP 1306
            V K+G++ RVVD       ++ +++  L +  +D+ P
Sbjct: 1391 VNKQGMSDRVVDEMNPEANLTWKDVSTLVQDNEDDPP 1427


>gi|444513557|gb|ELV10403.1| Helicase ARIP4 [Tupaia chinensis]
          Length = 615

 Score =  286 bits (731), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 156/392 (39%), Positives = 227/392 (57%), Gaps = 45/392 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 191  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSS-GFGC 249

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 250  ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPP 307

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 308  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 367

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 368  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 427

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 428  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 487

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D   
Sbjct: 488  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 546

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
               D  S+  +  +    +    +IWNHP +L
Sbjct: 547  --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVL 576


>gi|194886128|ref|XP_001976555.1| GG19952 [Drosophila erecta]
 gi|190659742|gb|EDV56955.1| GG19952 [Drosophila erecta]
          Length = 1717

 Score =  286 bits (731), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 149/373 (39%), Positives = 215/373 (57%), Gaps = 37/373 (9%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN+   +GEE + +   I+  +K HQ+ G+RF+++NII+S R+      G GCILAH+M
Sbjct: 410  VVNMAHPEGEETLYLAPQIAKVIKPHQIGGVRFLYDNIIESTRRYNKSS-GFGCILAHSM 468

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS-------ELKPL 814
            GLGKT QV++F    +R  +   +T L V P+N L NW  EF  W P          +  
Sbjct: 469  GLGKTLQVVSFCDIFLR--HTSAKTVLCVMPINTLQNWLSEFNMWIPRYSADSNVRARSF 526

Query: 815  RVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR------------ 860
             +F+L D  +    RA+++  W  +GGV LIGY  FR L+  K VK R            
Sbjct: 527  DIFVLNDQQKTLTARAKVILNWVHEGGVLLIGYELFRLLAL-KLVKTRKRKGSVIRPDGM 585

Query: 861  ----NMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNN 915
                ++   +  AL + GPD+++CDE H IKN+ A  + ALKQ++ +RRI LTG PLQNN
Sbjct: 586  DSSSDLMNLVYEALVKPGPDLVICDEGHRIKNSHAGISLALKQIRTRRRIVLTGYPLQNN 645

Query: 916  LMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF 975
            L+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R+H+L+  L GF
Sbjct: 646  LLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLGF 705

Query: 976  VQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY 1035
            VQR    V++  LP K  +VI  K++  QR+LY  F+         V   K   +    +
Sbjct: 706  VQRRSHTVLQLTLPQKYEYVILAKMTAFQRKLYDTFM-------TDVVRTKAFPNPLKAF 758

Query: 1036 QALAQIWNHPGIL 1048
                +IWNHP +L
Sbjct: 759  AVCCKIWNHPDVL 771



 Score =  187 bits (476), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/232 (43%), Positives = 140/232 (60%), Gaps = 6/232 (2%)

Query: 1087 FLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPT 1146
             L+ K  +  F   W  DL+  +    +  S KM +   IL     +GD+ L+FSQS+ T
Sbjct: 971  LLKSKQRNDEFSCSWAVDLMKNYVSGLISNSPKMEIFFCILKESLQLGDRILLFSQSLLT 1030

Query: 1147 LDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIS 1206
            L+L+E YL     PG   +LW K   ++RLDG T S ER++LV  FN   N  VK  LIS
Sbjct: 1031 LNLLEVYLKSSYVPG-SNQLWTKNSSYFRLDGSTSSQERERLVNEFNA--NSNVKLFLIS 1087

Query: 1207 TRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIY 1266
            TRAGSLGINL  ANRVII D SWNP +D QA+YR +RYGQTKP F YR++    +E+KIY
Sbjct: 1088 TRAGSLGINLTGANRVIIFDASWNPCHDTQAVYRIYRYGQTKPCFVYRIVMDRCLEKKIY 1147

Query: 1267 KRQVTKEGLAARVVDRQQVHRTISKEEMLHL-FEFGDDENPDPLTAVSKENG 1317
             RQ+ K+G++ R+VD       +S +++ +L  ++  DE  D +  V+K  G
Sbjct: 1148 DRQIKKQGMSDRIVDECNPEAHLSMKDITNLCHDYDSDE--DTVEEVTKSAG 1197


>gi|71410768|ref|XP_807662.1| helicase-like protein [Trypanosoma cruzi strain CL Brener]
 gi|70871713|gb|EAN85811.1| helicase-like protein, putative [Trypanosoma cruzi]
          Length = 1060

 Score =  285 bits (730), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 193/587 (32%), Positives = 303/587 (51%), Gaps = 49/587 (8%)

Query: 724  LKAHQVVGIRFMWENIIQS-IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 782
            L+ HQ+ GIRF+W  + +  I +V +    +GCILAHTMGLGKT QV+ FL+  +     
Sbjct: 232  LRPHQIDGIRFLWSILAEGPIGRVPA----VGCILAHTMGLGKTCQVVIFLHLLLNEKRG 287

Query: 783  GL---RTALIVTPVNVLHNWKQEFMKWRPSELKPL--RVFMLEDVSRD---RRAELLAKW 834
             L   +  LIV P +    W++EF  W  S+  PL  R+  +    RD   RR +L   W
Sbjct: 288  CLGRSQRVLIVVPKSTRPGWQKEFSTW--SQYFPLAHRILPIMIDERDGMKRRLDLYRSW 345

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG---PDILVCDEAHMIKNTRAD 891
             ++GGV L+GY     L+         +++E     + G    D+L+CDEAH +K+TR  
Sbjct: 346  WSEGGVLLVGYEMLLGLT--------KLSKEGSREDKKGCEFTDLLICDEAHRLKSTRLQ 397

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
             + AL+ +   RR+ LTG+PLQN+L EY+ MVDF    +      F+  F NPIE     
Sbjct: 398  ISAALRGLHPLRRLLLTGTPLQNHLQEYWAMVDFAVHKYF-EKRRFQEFFINPIEASVAQ 456

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
             ++S  V     ++  L  +L+ FVQR+D   ++ +LPP   +V+ + LS LQ RLY RF
Sbjct: 457  EASSRVVATARMKTFALIRELRHFVQRVDSTPLRDELPPLHEYVLVIPLSALQVRLYNRF 516

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
            L L          E+ + +F        +I  HP +L    D   P +E   +  S  + 
Sbjct: 517  LHLARL-------EQSKFNFLQAVTYANKISAHPQLL-FDSDPASPLKEILSEVESSPDD 568

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL-----DYSG------KM 1120
            D N          ++  +G    G  ++  ++  ++E  Y EL     DY+       K+
Sbjct: 569  DDNNNNNNNNNAGDNMGKGNRGHGDRRRTAFSGPVNE-GYAELFQPPADYTAAPEDGVKL 627

Query: 1121 VLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT 1180
             + + I+      G+++L FS S   L L E  ++++ R  +Q     +   + RLDG +
Sbjct: 628  YIAIRIIKAAMLRGERALFFSLSTKMLSLFEGIIAEMNRRWQQDGSLPRPIRFCRLDGNS 687

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
              +ER+  +  FN    +     L+S +AG +GIN+ SA RVI+ D  +NP  D QAI R
Sbjct: 688  SGAERENTLRSFNS--LRGADVLLLSMKAGGVGINITSATRVILADSGFNPADDRQAIGR 745

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            A+RYGQT+PVF YRL+ + T+E ++++++V KE L   +V+   + R
Sbjct: 746  AYRYGQTRPVFVYRLVCYQTLEHRMFQQKVAKEWLFHTIVEEASLKR 792


>gi|254540227|gb|ACT66228.1| LD04705p [Drosophila melanogaster]
          Length = 771

 Score =  285 bits (729), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 151/373 (40%), Positives = 218/373 (58%), Gaps = 37/373 (9%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN+   +GEE + +   I+  +K HQ+ G+RF+++NII+S R+      G GCILAH+M
Sbjct: 369  VVNMAHPEGEETLYLAPQIAKVIKPHQIGGVRFLYDNIIESTRRYNKS-SGFGCILAHSM 427

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP-----SELKP--L 814
            GLGKT QV++F    +R  +   +T L V P+N L NW  EF  W P     S ++P   
Sbjct: 428  GLGKTLQVVSFCDIFLR--HTSAKTVLCVMPINTLQNWLSEFNMWIPRYSTDSNVRPRNF 485

Query: 815  RVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR------------ 860
             +F+L D  +    RA+++  W   GGV LIGY  FR L+  K VK R            
Sbjct: 486  DIFVLNDQQKTLTARAKVILNWVHDGGVLLIGYELFRLLAL-KLVKTRKRKGSVIRPDGM 544

Query: 861  ----NMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNN 915
                ++   +  AL + GPD+++CDE H IKN+ A  + ALK+++ +RRI LTG PLQNN
Sbjct: 545  DSSSDLMNLVYEALVKPGPDLVICDEGHRIKNSHAGISLALKEIRTRRRIVLTGYPLQNN 604

Query: 916  LMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF 975
            L+EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D+K+M  R+H+L+  L GF
Sbjct: 605  LLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLGF 664

Query: 976  VQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY 1035
            VQR    V++  LP K  +VI VK++  QR+LY  F+         V   K   +    +
Sbjct: 665  VQRRSHTVLQLTLPQKYEYVILVKMTAFQRKLYDTFM-------TDVVRTKAFPNPLKAF 717

Query: 1036 QALAQIWNHPGIL 1048
                +IWNHP +L
Sbjct: 718  AVCCKIWNHPDVL 730


>gi|302823829|ref|XP_002993563.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
 gi|300138630|gb|EFJ05392.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
          Length = 852

 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 205/594 (34%), Positives = 302/594 (50%), Gaps = 83/594 (13%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL-GCILAHTMGLGKTFQVIAFLYTAMR 778
            ++  L+ HQ  G++FM+E +       K+GD    GCILA  MGLGKT Q I  L+T +R
Sbjct: 147  VAKFLRPHQREGVQFMFECVTGLREFSKAGDAAWSGCILADDMGLGKTLQSITLLWTLLR 206

Query: 779  SVNLGLRTA---LIVTPVNVLHNWKQEFMKW---RPSEL---KPLRVFMLEDVSRDRRAE 829
                G   A   +IVTP +++ NW+ E  KW   R S +   +  R  +L+DV     A 
Sbjct: 207  QGFQGSPIAKRIIIVTPTSLVSNWESEIKKWLGGRASVIAICEASRAEVLQDV-----AS 261

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
             L+  R    + +I Y  FR L  GK  K            +   D+L+CDEAH +KN  
Sbjct: 262  FLSP-RNAFQILIISYETFR-LHAGKFQK------------EGACDLLICDEAHRLKNDH 307

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              T QAL  ++C RR+ L+G+P+QN+L E+Y MV+F   G LG    FR  +QNPI  G+
Sbjct: 308  TLTNQALASLQCHRRVLLSGTPMQNDLEEFYAMVNFTNPGILGDVAAFRRYYQNPILRGR 367

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
               +T E  K+  +RS  L E++  F+ R    ++   LPPK V V+  KL+ LQR LY 
Sbjct: 368  EPEATEEARKLGLERSAELSEKVNQFILRRTNALLSNHLPPKIVEVVCCKLTNLQRELYT 427

Query: 1010 RFLDLHGFTNDRVS--NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
             F  +H   N R++  ++  R    A   AL ++ +HP ++  T   G      +E +  
Sbjct: 428  HF--IHS-KNVRLALQDKAKRARVLASITALKKLCSHPKLIYDTVRAG-----GSEAAGF 479

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
            +  M +       P+ M+   +G   DG + K                 SGKM +L  +L
Sbjct: 480  ENCMQFF------PKEMHTG-RGTPSDGSWVK----------------LSGKMFVLARLL 516

Query: 1128 -TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQ 1186
              +     D+ ++ S    TLDL     ++L R        ++   + RLDG T   +RQ
Sbjct: 517  ENLRKKTNDRIVLVSNYTQTLDL----FAQLCR--------ERNYPYVRLDGSTSIGKRQ 564

Query: 1187 KLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
            KLV++FN+P        L+S++AG  G+NL   NR+++ D  WNP  D QA  R WR GQ
Sbjct: 565  KLVQKFNDPSQNEF-AFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQ 623

Query: 1247 TKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
             K V+ YR +A GT+EEK+Y+RQ++KEGL       Q+V    SK E+  L +F
Sbjct: 624  KKRVYIYRFLATGTIEEKVYQRQISKEGL-------QKVISGDSKAEVRKLIKF 670


>gi|389638974|ref|XP_003717120.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
            [Magnaporthe oryzae 70-15]
 gi|351642939|gb|EHA50801.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
            [Magnaporthe oryzae 70-15]
 gi|440473058|gb|ELQ41880.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
            [Magnaporthe oryzae Y34]
 gi|440478318|gb|ELQ59160.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
            [Magnaporthe oryzae P131]
          Length = 1592

 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 186/601 (30%), Positives = 294/601 (48%), Gaps = 80/601 (13%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            I+N  ++  +  + +P  I+  +K HQ+ G+RFMW  ++       + D+  GC+LAHTM
Sbjct: 551  IINEAKKASQGFIYVPEPIAQNIKDHQIEGVRFMWNQVV-------NDDRSQGCLLAHTM 603

Query: 762  GLGKTFQVIAFLYTAMRSVN-------------LGLRTALIVTPVNVLHNWKQEFMKWRP 808
            GLGKT QVI  L     +               L     L++ P  +L+NW  EF +W  
Sbjct: 604  GLGKTVQVICLLVAIQHAAQSPDPSVVSQIPKELQRSQTLVLCPPGLLNNWLDEFSRW-- 661

Query: 809  SELKPL----RVFMLE-DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMA 863
              ++P     R++ ++ ++  + RA  +  W   GG+ L+GY+ FR+L      K +   
Sbjct: 662  --VEPYDALGRIYKIDSEIPAEARAASIEPWVNTGGILLMGYSLFRSLVSSGDSKMQTWL 719

Query: 864  REICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMV 923
             E+       P I+V DEAH IKN R+  ++A+   K + +IA+TGSPL N++ +Y+ M+
Sbjct: 720  TEL-------PSIVVADEAHTIKNERSKISEAMANFKAKAKIAMTGSPLANSVGDYFSMI 772

Query: 924  DFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV 983
            ++V   +LG   EF + F +PI+ G   +S+  + +   +    L + +   V RM    
Sbjct: 773  NWVAPNYLGPRKEFTHFFASPIQEGLFVDSSPAEKRRAMKLLKALKDTVSPKVHRMTTTA 832

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
            ++  LP K  +VI V L+  Q+  Y+ ++       D  +      S       L+ +  
Sbjct: 833  LRGQLPEKREYVIVVPLTEYQKSAYEVYMRWVATRADATT-----VSLLGYICQLSTLLV 887

Query: 1044 HPGI-LQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
            HP I LQ   +      +D   S S   +  + VIG     +N            ++D  
Sbjct: 888  HPRIFLQYFVELANEYDKDVRKSDSGREIPRH-VIGNLIAEVN------------RRDIH 934

Query: 1103 NDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
            N          LD+S K+ +L  IL     +GDK L+FS  IP L+ +E  +    RP  
Sbjct: 935  N----------LDHSYKITVLTRILDEAKRVGDKVLIFSSRIPVLNFLENLMKMQKRP-- 982

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
                      + RLDG T+ S RQ  V  FN       +  LIST AG +G+N+  ANRV
Sbjct: 983  ----------YSRLDGETKISTRQASVANFNA---NNDEVYLISTNAGGVGLNIQGANRV 1029

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            +++D  W P  + QAI RA+R GQTKPV+ Y L+  GT E K++   + K  LA+RVVD+
Sbjct: 1030 VMMDFQWQPANEQQAIGRAYRIGQTKPVYVYWLIVGGTYEPKLHAAAIFKTQLASRVVDK 1089

Query: 1283 Q 1283
            +
Sbjct: 1090 K 1090


>gi|71654268|ref|XP_815757.1| helicase-like protein [Trypanosoma cruzi strain CL Brener]
 gi|70880835|gb|EAN93906.1| helicase-like protein, putative [Trypanosoma cruzi]
          Length = 1053

 Score =  283 bits (723), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 195/589 (33%), Positives = 309/589 (52%), Gaps = 54/589 (9%)

Query: 724  LKAHQVVGIRFMWENIIQS-IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 782
            L+ HQ+ GIRF+W  + +  + +V +    +GCILAHTMGLGKT QV+ FL+  +     
Sbjct: 232  LRPHQIDGIRFLWSILAEGPVGRVPA----VGCILAHTMGLGKTCQVVIFLHLFLNGKRG 287

Query: 783  GL---RTALIVTPVNVLHNWKQEFMKWRPSELKPL--RVFMLEDVSRD---RRAELLAKW 834
             L   +  LIV P +    W++EF  W  S+  PL  R+  +    RD   RR +L   W
Sbjct: 288  FLGRSQRVLIVVPKSTRPGWQKEFSTW--SQYFPLAHRILPIMIDERDGMKRRLDLYRSW 345

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG---PDILVCDEAHMIKNTRAD 891
             ++GGV L+GY     L+         +++E     + G    D+L+CDEAH +K+TR  
Sbjct: 346  WSEGGVLLVGYEMLLGLT--------KLSKEGSRVDKKGCEFTDLLICDEAHRLKSTRLQ 397

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
             + AL+ +   RR+ LTG+PLQN+L EY+ MVDF    +      F+  F NPIE     
Sbjct: 398  ISAALRGLHPLRRLLLTGTPLQNHLQEYWAMVDFAVHKYF-EKRRFQEFFINPIEASVAQ 456

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
             ++S  V     ++  L  +L+ FVQR+D   ++ +LPP   +V+ + LS LQ RLY RF
Sbjct: 457  EASSRVVATARMKTFALIRELRHFVQRVDSTPLRDELPPLHEYVLVIPLSGLQVRLYNRF 516

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE--DAEDSSSDE 1069
            L L          E+ + +F        +I  HP +L   +D   P +E     +SS D+
Sbjct: 517  LHLARL-------EQSKFNFLQAVTYANKISAHPQLL-FDRDPASPLKEILSEVESSPDD 568

Query: 1070 NMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL-----DYSG------ 1118
            + + N    +   NM    +G    G  ++  ++  ++E  Y EL     DY+       
Sbjct: 569  DNNNNNNNEDAGDNMG---KGNRGHGDRRRTSFSGPVNE-GYAELFQPPADYTAAPEDGV 624

Query: 1119 KMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
            K+ + + I+      G+++L FS S   L L E  ++++ R  +Q     +   + RLDG
Sbjct: 625  KLYIAIRIIKAAMLRGERALFFSLSTKMLSLFEGIIAEMNRRWQQDGSLPRPIRFCRLDG 684

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
             +  +ER+  +  FN   ++     L+S +AG +GIN+ SA RVI+ D  +NP  D QAI
Sbjct: 685  NSSGAERENTLRSFNS--SRGADVLLLSMKAGGVGINITSATRVILADSGFNPADDRQAI 742

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
             RA+RYGQT+PVF YRL+ + T+E ++++++V KE L   +V+   + R
Sbjct: 743  GRAYRYGQTRPVFVYRLVCYQTLEHRMFQQKVAKEWLFHTIVEEASLKR 791


>gi|358379006|gb|EHK16687.1| hypothetical protein TRIVIDRAFT_112213, partial [Trichoderma virens
            Gv29-8]
          Length = 1802

 Score =  283 bits (723), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 202/629 (32%), Positives = 313/629 (49%), Gaps = 65/629 (10%)

Query: 679  VTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWEN 738
            V L   L+   +I V    +   I+N  +E  +  + +   I   +K HQ+ G+RF+WE 
Sbjct: 821  VKLRAALATSNAIPVEKSRV---IINESKEDDQSFIYVNDEIGKLIKNHQINGVRFLWEQ 877

Query: 739  IIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVN-------------LGLR 785
            I+    + K      GC+LAHTMGLGKT QVI FL   + + N             L   
Sbjct: 878  IVLDANERKERQ---GCLLAHTMGLGKTMQVITFLVAVIEAANSDDESVRSQIPKELRKS 934

Query: 786  TALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR-DRRAELLAKWRAKGGVFLIG 844
             +L++ P  ++ NW  E + W P  L    VF +E   + D R   +  W  +GGV +IG
Sbjct: 935  QSLVLCPAGLVDNWLDEILMWSPKGLLG-HVFKVESAQKGDIRMSTVRDWEREGGVLVIG 993

Query: 845  YTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRR 904
            +  F         K  N  REI   L   P+I++CDEAH++KN ++   +A ++ + + R
Sbjct: 994  HKMFE--------KSDNDMREI---LTQTPNIVICDEAHVMKNPKSKIHRACQEFRTKSR 1042

Query: 905  IALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQR 964
            IALTGSPL NN+ EYY M+++V   FLG   EFR+ + NPI+ G   +S+  + +   + 
Sbjct: 1043 IALTGSPLSNNVEEYYWMINWVAPKFLGPQEEFRDIYVNPIQCGLWHDSSGYEKRRALKM 1102

Query: 965  SHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL-DLHGFTNDRVS 1023
              +L   +   VQR     VK +LP K  FVI V+ +  Q+ LY  +L ++  +  D   
Sbjct: 1103 LEVLKLNVAPKVQRATTQCVKHELPAKYEFVIFVEPTRTQKMLYNLYLTEMAPYLED--- 1159

Query: 1024 NEKIRKSFFAGYQALAQIWNHP-----GILQLTKDKGYPSREDAEDSSSDENMDYNVVIG 1078
                +   F+  + L  I NHP      +L+++     P    A  ++    MD      
Sbjct: 1160 --SKQAKIFSASEHLRLICNHPRCFRQKVLEMSSKANVPGSSRALTAAQQREMDEIEDDT 1217

Query: 1079 EKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE---LDYSGKMVLLLDILTMCSNMGD 1135
            +     +   + K     F +   + +L E    +      S K+ LLL +L     +GD
Sbjct: 1218 DD----DCVDKIKAPAMTFPQSMISSVLKETNRADNANPTLSRKVELLLMVLDEARAIGD 1273

Query: 1136 KSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEP 1195
            K LVFSQS+ TL+    YL  L +  ++           RLDG T  S+RQ+ ++ FN  
Sbjct: 1274 KVLVFSQSLLTLN----YLDNLFKQQRRAVC--------RLDGSTAVSKRQEQIKAFN-- 1319

Query: 1196 LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRL 1255
               + +  LIST+AG +G+N+  ANRV+I D  WNP  + QA+ RA+R+GQ K V+ Y+ 
Sbjct: 1320 -TGKQEIYLISTQAGGVGLNIFGANRVVIFDFKWNPVTEQQAVGRAYRFGQEKTVYVYQF 1378

Query: 1256 MAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
            +  G  EE +  + V K  LA+RVVD+++
Sbjct: 1379 VVSGAFEEALQNKTVFKMQLASRVVDKKK 1407


>gi|298711307|emb|CBJ26552.1| DNA repair and recombination protein RAD54 homolog [Ectocarpus
            siliculosus]
          Length = 1510

 Score =  282 bits (721), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 205/648 (31%), Positives = 315/648 (48%), Gaps = 83/648 (12%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL- 782
            L+ HQ  G++FM+E ++  +R+ +    G GCILA  MGLGKT Q IA L+T ++     
Sbjct: 194  LRPHQREGVQFMFECVM-GMREFE----GSGCILADDMGLGKTLQSIAVLWTLLKQGKAK 248

Query: 783  ---GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKG- 838
                +R A++V P +++ NW+ E  KW   +    RV  L + +R++  + +  + A   
Sbjct: 249  GQPAVRRAVVVCPTSLVKNWEAEIDKWLKGDC---RVIALSETTREQVVQSINLFLASMV 305

Query: 839  -GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              V ++ Y  FR      H K      + C       D+L+CDEAH +KN    T QAL 
Sbjct: 306  YRVLIVSYETFR-----LHSKRFYAKADTCC------DLLICDEAHRLKNAETATNQALS 354

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             +KC++R+ L+G+P+QN+L E+Y M DF   G LGS   FR +F +PI  G+  ++T + 
Sbjct: 355  ALKCRKRVLLSGTPMQNDLEEFYAMTDFTNPGVLGSGSSFRKKFLSPILAGREPSATDKQ 414

Query: 958  V----KIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL- 1012
            V    K  N+ S ++ E    F+ R   N+  K LPPK V V+  +L+P+Q ++YK  L 
Sbjct: 415  VERAQKCQNEMSTVVNE----FILRRTNNINAKHLPPKLVQVVCCRLTPVQTKIYKHLLS 470

Query: 1013 --DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKG----YPSREDAE 1063
              ++    N + +N        +   A+ ++ NHP +L      +D G      S   AE
Sbjct: 471  SKEIRHILNGKQTN------ILSSIGAMQKLCNHPKLLVEGAAGRDSGSHAEIASMLPAE 524

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
             SSS    +     G                        +  + +  + E  +SGKM  L
Sbjct: 525  TSSSSALAEGVGGRGMSGGGGFGRRS-------------SGGMQKGVFPE--WSGKMETL 569

Query: 1124 LDILTMCSNMG-DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTES 1182
              ++    N G D+ +V S    +LDLI     +   P            + RLDG T  
Sbjct: 570  FRLMREMRNTGDDRIVVVSNFTSSLDLIGSMCRENSWP------------FVRLDGSTGV 617

Query: 1183 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1242
            S+RQK+V  FNEP   +    L+S++AG  G+NL   NR+++ D  WNP  D QA  R W
Sbjct: 618  SKRQKMVNAFNEP-GPQSFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARVW 676

Query: 1243 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKE--EMLHLFEF 1300
            R GQ K  F YR ++ GT+EEK+++RQ++KEGL   V D+++V+   SK+  ++  L+E 
Sbjct: 677  RDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNIVDDKEEVNSLSSKDLKDLFKLYEG 736

Query: 1301 GDDENPDPLTAVS---KENGQGSSQNTNCALKHKLPLSHEGCSDKLME 1345
               +  D L        E  Q         L+  LP     C D L E
Sbjct: 737  TPSDTHDKLRCKRCNIDEAVQAVKDIDEAGLRRALPQQLALCEDLLSE 784


>gi|170048582|ref|XP_001853354.1| transcriptional regulator ATRX [Culex quinquefasciatus]
 gi|167870647|gb|EDS34030.1| transcriptional regulator ATRX [Culex quinquefasciatus]
          Length = 1334

 Score =  282 bits (721), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 152/395 (38%), Positives = 235/395 (59%), Gaps = 22/395 (5%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++   E  E  + +  ++  KLK HQ  GI+FM++   +S+ + ++  KG GCILAH M
Sbjct: 483  VLDFDEETKEPLLEVDKTLVKKLKPHQANGIKFMFDACFESLERARNS-KGSGCILAHCM 541

Query: 762  GLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE 820
            GLGKT QV+   +T +  S + G+   L++ P++ + NW  EF  W     K   V + E
Sbjct: 542  GLGKTLQVVTLCHTLLSNSESTGVERILVICPLSTVLNWVNEFRIWMKHVKKGTEVEVYE 601

Query: 821  DVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE-ICHALQD-GP 874
             +S+ +    RA  L +W  +GGV ++GY  +RNLS     + +   RE +  +L D GP
Sbjct: 602  -ISKYKNNIVRANQLMEWHNEGGVMVLGYDMYRNLSNQTTGRIKKKVRESLSTSLIDPGP 660

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D++VCDE H++KN +   ++A+ ++   RRI LTG+P+QNN+ EYYCMV FV+   LG+ 
Sbjct: 661  DLIVCDEGHLLKNEKTSLSKAVNRITTLRRIVLTGTPIQNNMKEYYCMVQFVKPKLLGTY 720

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
            +E+ NRF NPI NGQ+T+ST  D+++M +R+H+L++ L G VQR D  V+   LPPK  F
Sbjct: 721  NEYMNRFVNPITNGQYTDSTPYDIQLMRKRAHVLHKLLDGCVQRRDYAVLAPFLPPKLEF 780

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQLTKD 1053
            V+++KL+PLQ  LYK +++       + S+E  R S  FA +Q L +IW HP +L+   D
Sbjct: 781  VVSIKLTPLQVTLYKYYMETQA---RKQSDETKRASVLFADFQNLQRIWTHPRVLRYNSD 837

Query: 1054 KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFL 1088
            +    ++   D  SDE         E   +M DFL
Sbjct: 838  RYEYMQQKKRDMESDE---------ESMGSMKDFL 863



 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 59/114 (51%), Positives = 83/114 (72%), Gaps = 2/114 (1%)

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            LISTRAG LGINL +ANRVII D SWNP++D+Q+I+R +R+GQ KP + YR +A GTMEE
Sbjct: 984  LISTRAGGLGINLVAANRVIIFDVSWNPSHDIQSIFRVYRFGQVKPCYIYRFLAMGTMEE 1043

Query: 1264 KIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFG--DDENPDPLTAVSKE 1315
            KIY+RQVTK+ ++ RV+D QQ+ R   + ++  L+ +   D E   P+  + K+
Sbjct: 1044 KIYERQVTKQAISKRVIDEQQIDRHYKENDLQELYRYDMIDPEEARPMPNLPKD 1097


>gi|452982165|gb|EME81924.1| hypothetical protein MYCFIDRAFT_29364, partial [Pseudocercospora
            fijiensis CIRAD86]
          Length = 528

 Score =  282 bits (721), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 192/598 (32%), Positives = 304/598 (50%), Gaps = 100/598 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            ++ + +   I+AK+K HQ+ G+RFMW  +       +  D G GC+LAHTMGLGKT Q I
Sbjct: 22   QDLIFVEQGIAAKMKDHQITGVRFMWREL-----TAQGDDAGQGCVLAHTMGLGKTMQTI 76

Query: 771  AFLYT---AMRSVN--LGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR- 824
            A L     A +S N    LRT L++ P +++ NW+ E  KW     + +        ++ 
Sbjct: 77   AVLVAINEAAQSRNKRRQLRT-LVLCPPSLVENWRCEINKWAGHIFQNVYAVGTGSSNKE 135

Query: 825  -DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAH 883
             ++R + +  W   GGV L+GYT F N+                        ++V DEAH
Sbjct: 136  MNQRLDQMRTWHQLGGVLLVGYTMFLNM------------------------LVVADEAH 171

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
             +KN +A  ++A K ++ + RI LTG+P+ N++ E Y ++ FV   +LG    F  +F  
Sbjct: 172  YLKNDKALVSRAAKMIRSESRIGLTGTPMSNDVDEIYSLISFVAPDYLGERGWFTQQFST 231

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            PI+ G   +ST    +   ++  +L+ +++  V R D+ V++  +  K  + +T+ L+ +
Sbjct: 232  PIKEGNGRDSTLSQRRRSLKKLAVLHSKIEPKVNRADITVLRGSIKSKVEYAVTMPLTAV 291

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAE 1063
            Q   Y++FL                                 G+L  T+DK        E
Sbjct: 292  QHAAYQKFL---------------------------------GVLLRTEDK--------E 310

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD--YSGKMV 1121
             +S     D   V  +K  +++D L+     GF  +    D L      ELD   S KM 
Sbjct: 311  KASQVRIFDGLAVDLDKIGDIDDTLRVL---GFSNETV--DHLVSDIDDELDPSLSSKMS 365

Query: 1122 LLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            LL+DI+ +  +  DK LVFS SIPTLD    Y+++L        L  +G    R+DG   
Sbjct: 366  LLIDIIKLSKSCDDKVLVFSSSIPTLD----YVAQL--------LNSRGYRCGRIDGNVA 413

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
            +++RQ++VE FN  ++      +ISTRAG +G+N+ +ANRV+I+D  +NP ++ QAI RA
Sbjct: 414  ANKRQQVVENFNNGID---DVMIISTRAGGVGLNIQAANRVVILDSGFNPAHEEQAIGRA 470

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFE 1299
            +R GQ KPVF YRL+  GT E++I+ +Q  K+ L +RVVD++   R  +      LFE
Sbjct: 471  YRLGQEKPVFVYRLIIGGTFEDEIHNKQRFKQSLTSRVVDKKNPKRNATLNSREWLFE 528


>gi|255555479|ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
            communis]
 gi|223542157|gb|EEF43701.1| DNA repair and recombination protein RAD54B, putative [Ricinus
            communis]
          Length = 940

 Score =  281 bits (720), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 204/594 (34%), Positives = 294/594 (49%), Gaps = 75/594 (12%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV--- 780
            L+ HQ  G++FM++     +  + S     GCILA  MGLGKT Q I  LYT +      
Sbjct: 190  LRPHQREGVQFMFD----CVSGLHSAANINGCILADDMGLGKTLQSITLLYTLLGQGFDD 245

Query: 781  NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD---RRAELLAKWRAK 837
               +R A+IVTP +++ NW+ E  KW    +K   +  L + +RD      +  A  R+ 
Sbjct: 246  KPMVRKAIIVTPTSLVSNWEAEIKKWVGESVK---LIALCETTRDDVVSGIDSFANPRSN 302

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              V ++ Y  FR  S  K   D     E C       D+L+CDEAH +KN +  T +AL 
Sbjct: 303  LQVLIVSYETFRMHS-SKFSHD-----ESC-------DLLICDEAHRLKNDQTLTNRALA 349

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             + C+RRI L+G+P+QN+L E++ MV+F   G LG +  FR  ++ PI  G+   +T E+
Sbjct: 350  ALSCKRRILLSGTPMQNDLEEFFAMVNFTNPGILGDAAYFRRYYETPIICGREPTATEEE 409

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
             K+  +RS  L  ++  F+ R    ++   LPPK V V+  KL+PLQ  LY  F  +H  
Sbjct: 410  KKLGAERSGELSAKVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQSELYNHF--IHSK 467

Query: 1018 TNDRVSNEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVV 1076
               R   E+ +KS    Y  AL ++ NHP ++  T   G P     ED            
Sbjct: 468  NVKRAITEETKKSKILAYITALKKLCNHPKLIYDTIRSGTPGTSGFED-----------C 516

Query: 1077 IGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDK 1136
            I   P  M     G    G     W            ++ SGKM +L  +L       D 
Sbjct: 517  IRFFPPGMFSGRSGTWSGG--DGSW------------IELSGKMHVLARLLAHLRQRTDD 562

Query: 1137 SLVF-SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEP 1195
             +V  S    TLDL     ++L R  +   L        RLDG T   +RQKLV RFN+ 
Sbjct: 563  RIVLVSNYTQTLDL----FAQLCRERRYPHL--------RLDGATSIGKRQKLVNRFNDQ 610

Query: 1196 LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRL 1255
             +K     L+S++AG  G+NL   NR+++ D  WNP  D QA  R WR GQ K V+ YR 
Sbjct: 611  -SKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARIWRDGQKKRVYIYRF 669

Query: 1256 MAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK------EEMLHLFEFGDD 1303
            ++ GT+EEK+Y+RQ++KEGL  +V+  +Q   TIS+      E++  LF F  D
Sbjct: 670  LSTGTIEEKVYQRQMSKEGL-QKVIQHEQNDSTISEGNFLSTEDLRDLFTFYGD 722


>gi|301122241|ref|XP_002908847.1| DNA repair and recombination protein RAD54 [Phytophthora infestans
            T30-4]
 gi|262099609|gb|EEY57661.1| DNA repair and recombination protein RAD54 [Phytophthora infestans
            T30-4]
          Length = 1076

 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 193/608 (31%), Positives = 296/608 (48%), Gaps = 69/608 (11%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +P  +   L+ HQ  G++FM++ + Q    VK  D G GCILA  MGLGKT Q I  +
Sbjct: 171  VVVPEIVGKFLRPHQREGVQFMFDCVCQ----VKGFD-GQGCILADDMGLGKTLQSITLM 225

Query: 774  YTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML--EDVSRDRRA 828
            YT + +   +   +  A++V P +++ NW  E +KW    +K + +F    E V +    
Sbjct: 226  YTLLLTGMDMKPTVNRAIVVCPTSLVKNWDDEIIKWLHGRVKTVALFEAKRETVIKGINQ 285

Query: 829  ELLAKWRAKGG----VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHM 884
             +    R + G    V +I Y  FR      H +        C       D+L+CDEAH 
Sbjct: 286  FIEGSKRPRPGFSAQVLIISYETFR-----MHAQKFADTPACC-------DLLICDEAHR 333

Query: 885  IKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNP 944
            +KN  +   +AL  + C++R+ L+G+P+QN+L E++ MVDF     LG+  EFR  +  P
Sbjct: 334  LKNANSQINKALSSLACRKRVLLSGTPMQNDLEEFFAMVDFTNPNILGTPSEFRKNYLGP 393

Query: 945  IENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQ 1004
            I  G+  +ST  + ++    S +L E +  F+ R    +  K LPPK + VI   LSPLQ
Sbjct: 394  ILIGREPDSTDRERQVAQSCSAMLCEIVNQFILRRGNILNAKHLPPKLMQVICCPLSPLQ 453

Query: 1005 RRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAED 1064
             +LY  FL        R   ++   +  +   AL ++ NHP ++                
Sbjct: 454  DKLYNHFLSSSAC---RDMMKRSSANVLSSITALKKLCNHPLLI---------------- 494

Query: 1065 SSSDENMDYNVVIGEKPRNMNDFLQGKNDD---GFFQKDWWNDLLHEHTYKELDYSGKMV 1121
               DE    N  +         F   K+     G   +           Y E  +SGKM 
Sbjct: 495  --FDEMGKTNTKLPGFSNCAQYFTAAKSSKEGGGGDSRHRRGGFGGRTCYPE--WSGKM- 549

Query: 1122 LLLD--ILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
            LLLD  + +M     D+ ++ S    TLD++     +   P            + RLDG 
Sbjct: 550  LLLDRLMFSMRKTTTDRIVIVSNYTQTLDVVSTLCQERHLP------------FVRLDGT 597

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
            T + +R+KLV+ FNEP        L+S++AG  G+NL  ANR+++ D  WNP  D QA  
Sbjct: 598  TSAKKRKKLVDTFNEPTTNSF-ALLLSSKAGGCGLNLIGANRLVLFDPDWNPATDKQAAA 656

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFE 1299
            R WR GQ K  + YR +A GT+EEKI++RQ++KEGL   V D+++V+ ++S +++  LF 
Sbjct: 657  RVWREGQKKMCYVYRFLATGTLEEKIFQRQLSKEGLQNIVDDKEEVN-SLSSKDLKRLFV 715

Query: 1300 FGDDENPD 1307
            F  D   D
Sbjct: 716  FRKDTMSD 723


>gi|407860383|gb|EKG07387.1| helicase-like protein, putative [Trypanosoma cruzi]
          Length = 1052

 Score =  280 bits (717), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 196/588 (33%), Positives = 306/588 (52%), Gaps = 53/588 (9%)

Query: 724  LKAHQVVGIRFMWENIIQS-IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 782
            L+ HQ+ GIRF+W  + +  + +V +    +GCILAHTMGLGKT QV+ FL+  +     
Sbjct: 231  LRPHQIDGIRFLWSILAEGPVGRVPA----VGCILAHTMGLGKTCQVVIFLHLLLNEKRG 286

Query: 783  GL---RTALIVTPVNVLHNWKQEFMKWRPSELKPL--RVFMLEDVSRD---RRAELLAKW 834
             L   +  LIV P +    W++EF  W  S+  PL  R+  +    RD   RR +L   W
Sbjct: 287  CLGRSQRVLIVVPKSTRPGWQKEFSTW--SQYFPLAHRILPIMIDERDGMKRRLDLYRSW 344

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG---PDILVCDEAHMIKNTRAD 891
             ++GGV L+GY     L+         +++E     + G    D+L+CDEAH +K+TR  
Sbjct: 345  WSEGGVLLVGYEMLLGLT--------KLSKEGSREDKKGCEFTDLLICDEAHRLKSTRLQ 396

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
             + AL+ +   RR+ LTG+PLQN+L EY+ MVDF    +      F+  F NPIE     
Sbjct: 397  ISVALRGLHPLRRLLLTGTPLQNHLQEYWAMVDFAVHKYF-EKRRFQEFFINPIEASVAQ 455

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
             ++S  V     ++  L  +L+ FVQR+D   ++ +LPP   +V+ + LS LQ RLY RF
Sbjct: 456  EASSRVVATARMKTFALIRELRHFVQRVDSTPLRDELPPLHEYVLVIPLSALQVRLYNRF 515

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED-AEDSSSDEN 1070
            L L          E+ + +F        +I  HP +L    D   P +E  +E  SS ++
Sbjct: 516  LHLARL-------EQSKFNFLQAVTYANKISAHPQLL-FDSDPASPLKEILSEVESSPDD 567

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL-----DYSG------K 1119
             D N        NM    +G    G  ++  ++  ++E  Y EL     DY+       K
Sbjct: 568  DDDNNNNNNVGDNMG---KGNRRHGDRRRTAFSGPVNE-GYAELFQPPVDYTAAPEDGVK 623

Query: 1120 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
            + + + I+      G+++L FS S   L L E  ++++ R  +Q     +   + RLDG 
Sbjct: 624  LYIAIRIIKAAMLRGERALFFSLSTKMLSLFEGIIAEMNRRWQQDGSLPRPIRFCRLDGN 683

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
            +  +ER+  +  FN    +     L+S +AG +GIN+ SA RVI+ D  +NP  D QAI 
Sbjct: 684  SSGAERENTLRSFNS--LRGADVLLLSMKAGGVGINITSATRVILADSGFNPADDRQAIG 741

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            RA+RYGQT+PVF YRL+ + T+E ++++++V KE L   +V+   + R
Sbjct: 742  RAYRYGQTRPVFVYRLVCYQTLEHRMFQQKVAKEWLFHTIVEEASLKR 789


>gi|147766539|emb|CAN69692.1| hypothetical protein VITISV_026778 [Vitis vinifera]
          Length = 219

 Score =  280 bits (716), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 132/185 (71%), Positives = 153/185 (82%)

Query: 131 EQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGAEDFLQTER 190
           EQLDGAGIELPSLY+ IE+Q PNGCCTEAWK+R HW+GSQVT +  ESI  AE  LQT+R
Sbjct: 32  EQLDGAGIELPSLYKWIESQAPNGCCTEAWKQRVHWIGSQVTGDTTESIIEAEKHLQTDR 91

Query: 191 PVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVSEKCAAFGSK 250
           PVRRRHGKLLEEGASG+L  K+A+DG+     E ++++W S NK FS   SE    FGS+
Sbjct: 92  PVRRRHGKLLEEGASGYLANKLASDGNREAVTENAEVDWCSFNKCFSDHASEDSTLFGSE 151

Query: 251 HWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEKELALSEEQRK 310
           HWASVYLASTPQQAA MGLKFPGVDEVEEI+D+DGNS DPFVADAIANE+ + LSEEQ+K
Sbjct: 152 HWASVYLASTPQQAAVMGLKFPGVDEVEEIDDIDGNSSDPFVADAIANERAVDLSEEQKK 211

Query: 311 KFRKV 315
           KF+KV
Sbjct: 212 KFKKV 216


>gi|449445882|ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
            sativus]
 gi|449497618|ref|XP_004160452.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
            sativus]
          Length = 928

 Score =  280 bits (715), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 199/594 (33%), Positives = 297/594 (50%), Gaps = 75/594 (12%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++FM+E     +  +  G    GCILA  MGLGKT Q I+ LYT +     G
Sbjct: 181  LRPHQREGVQFMFE----CVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLLCQGFDG 236

Query: 784  ---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW---RAK 837
               ++ A+IVTP +++ NW+ E  KW    +    +  L + SR+     +  +   ++ 
Sbjct: 237  KPMVKKAIIVTPTSLVSNWEAEIKKWVGERV---HLIALCESSREDVVSSIDSFVHPKSS 293

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              V +I Y  FR  S       +    E C       D+L+CDEAH +KN +  T +AL 
Sbjct: 294  LQVLIISYETFRMHS------SKFSQSESC-------DLLICDEAHRLKNDQTLTNRALA 340

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             + C+RR+ L+G+P+QN+L E++ MV+F   G LG    FR  ++ PI  G+   +T E+
Sbjct: 341  ALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEE 400

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
             K+  QRS  L E++  F+ R    ++   LPPK V VI  KLSPLQ  LY  F+     
Sbjct: 401  KKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCKLSPLQADLYNHFVQSKNV 460

Query: 1018 TNDRVSNEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVV 1076
               R   E+++++    Y  AL ++ NHP ++  T   G P     E             
Sbjct: 461  --KRAITEELKQAKILAYITALKKLCNHPKLIYDTIKSGSPGTSGLES-----------C 507

Query: 1077 IGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDK 1136
            I   P  M     G++         W +L           SGKM +L  +L       D 
Sbjct: 508  IRFFPPEM---FSGRSGAWTGGDGAWVEL-----------SGKMHVLARLLAHLRQRTDD 553

Query: 1137 SLVF-SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEP 1195
             +V  S    TLDL     ++L R        ++   + RLDG T  S+RQKLV RFN+ 
Sbjct: 554  RIVLVSNYTQTLDL----FAQLCR--------ERRYPYLRLDGTTSISKRQKLVNRFND- 600

Query: 1196 LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRL 1255
            L+K     L+S++AG  G+NL   NR+++ D  WNP  D QA  R WR GQ K VF YR 
Sbjct: 601  LSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 660

Query: 1256 MAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT------ISKEEMLHLFEFGDD 1303
            ++ GT+EEK+Y+RQ++KEGL  +V+ ++  +        +S E++  LF F D+
Sbjct: 661  LSTGTIEEKVYQRQMSKEGL-QKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDN 713


>gi|281209956|gb|EFA84124.1| SNF2-related domain-containing protein [Polysphondylium pallidum
            PN500]
          Length = 1905

 Score =  280 bits (715), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 190/596 (31%), Positives = 299/596 (50%), Gaps = 93/596 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   IS  L+ HQ  G++F+++ +     +      G GCILA  MGLGKT   +  L
Sbjct: 852  VVVDPFISKHLRPHQRRGVQFLYDCVTGQRHQF-----GNGCILADQMGLGKTVMTLTTL 906

Query: 774  YTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSE-LKPLRVFMLEDVSRDRRAE 829
            +T ++    G  T   A+IVTP  ++ NWK+E  +W  +E LKP   F L D       +
Sbjct: 907  WTLLKQSPTGQPTCKKAIIVTPAGLVGNWKREIKRWFGAERLKP---FTLNDSVSKNTKQ 963

Query: 830  LLAKWRAK--GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
            +L  +       V +I Y   R  S             I   +  G  +LVCDE H +KN
Sbjct: 964  MLEDFNTSTVNPVLIISYDQCRIFS------------SILCTMSCG--VLVCDEGHRLKN 1009

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
              + TTQ++  +K + +I L+G+P+QN+L+E+Y MVDF   G LG+  +F+  + NPI  
Sbjct: 1010 MESQTTQSIASIKTKAKIILSGTPIQNDLIEFYSMVDFCNPGSLGTLSQFKKDYANPIIR 1069

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            G+  +ST E +    Q S I       F+ R   NV+++ LP KT+ V+  +LS  Q++L
Sbjct: 1070 GRE-DSTKEGIAKAMQLSKI----TSSFILRRKSNVLEEYLPTKTIHVVFCRLSEFQKKL 1124

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            Y+  LD +G   D +   K  ++       L Q+ N+P +++      Y +  D+ D+++
Sbjct: 1125 YRAVLDNNGV--DSIIAGK--QNALTTMTTLKQLCNYPSLIKSDDYSKYFT--DSNDTTT 1178

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
              + D +                                          SGKM  +  +L
Sbjct: 1179 PTDFDAS-----------------------------------------QSGKMEFVEQLL 1197

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
                ++GD++++ S    TLD+ E  L KL                YR+DG+ +++ERQ 
Sbjct: 1198 ITLKSLGDRAVLVSNYTQTLDVFELLLKKL------------SIQSYRIDGQVKATERQD 1245

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
             V++FN+P NK     L+S++AG +G+NL  AN +++ D  WNP  D+QA+ R WR GQT
Sbjct: 1246 RVDKFNDPSNKTHTVFLLSSKAGGVGLNLIGANHIVLYDPDWNPAIDIQAMERVWREGQT 1305

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR-TISKEEMLHLFEFGD 1302
            KPV  YRL+  GT+EEKI++RQ+ KE L+  VVD+    + T + EE+  +F   D
Sbjct: 1306 KPVSIYRLLTAGTIEEKIHQRQIIKESLSNSVVDKSHYEKSTFTNEELKDIFSLND 1361


>gi|407425493|gb|EKF39461.1| helicase-like protein, putative [Trypanosoma cruzi marinkellei]
          Length = 1077

 Score =  280 bits (715), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 199/597 (33%), Positives = 306/597 (51%), Gaps = 57/597 (9%)

Query: 723  KLKAHQVVGIRFMWENIIQS-IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM--RS 779
            +L+ HQ+ GIRF+W  + +  + +V +    +GCILAHTMGLGKT QV+ FL+  +  R 
Sbjct: 242  QLRPHQIDGIRFVWSILAEGPVGRVPA----VGCILAHTMGLGKTCQVVIFLHLFLNERR 297

Query: 780  VNLGL-RTALIVTPVNVLHNWKQEFMKWRPSELKPL--RVFMLEDVSRD---RRAELLAK 833
             +LG  +  LIV P +    W++EF  W  S+  PL  R+  +    RD   RR +L   
Sbjct: 298  GSLGRSQRVLIVVPKSTRLGWQKEFSTW--SQYFPLAQRILPIMIDERDGMKRRLDLYRS 355

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG---PDILVCDEAHMIKNTRA 890
            W  +GGV L+GY     L+         +++E     + G    D+L+CDEAH +K+TR 
Sbjct: 356  WWNEGGVLLVGYEMLLGLT--------KLSKEGTREDKKGCEFTDLLICDEAHRLKSTRL 407

Query: 891  DTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH 950
              + AL+ +   RR+ LTG+PLQN+L EY+ MVDF    +      F+  F NPIE    
Sbjct: 408  QISAALRGLHPLRRLLLTGTPLQNHLQEYWAMVDFAVHKYF-EKRRFQEFFINPIEASVA 466

Query: 951  TNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKR 1010
              ++S +V     ++  L  +L+ FVQR+D   ++ +LPP   +V+ V LS LQ RLY R
Sbjct: 467  QEASSREVATARMKTFALIRELRHFVQRVDSTPLRDELPPLHEYVLVVPLSTLQVRLYNR 526

Query: 1011 FLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS 1067
            FL L          E+ R +F        +I  HP +L   +D   P RE   D E S  
Sbjct: 527  FLHLARL-------EQSRFNFLQAVTYANKISAHPQLL-FDRDPASPLREIMSDVESSPD 578

Query: 1068 DENMDYNVVIGEKPRNMNDFLQ-----GKNDDGFFQ----------KDWWNDLLHEHT-Y 1111
            D+  D +        N N+        GK +                + ++DL      Y
Sbjct: 579  DDEDDDDDDDDGNNNNNNNNEDAGDNVGKGNRRRGDRRRTAFSGPVSEGYSDLFQPPADY 638

Query: 1112 KELDYSG-KMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
                  G K+ + + I+      G+++L FS S   L L E  ++++ R  +Q     + 
Sbjct: 639  MAAPEDGVKLYISIRIIKAAMLRGERALFFSLSTKLLTLFEGIIAEMNRRWQQDGSLSRP 698

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
              + RLDG +  +ER+  +  FN   ++     L+S +AG +GIN+ SA RVI+ D  +N
Sbjct: 699  IRFCRLDGNSSGAERESTLRSFNS--SRGADVLLLSIKAGGVGINITSATRVILADSGFN 756

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            P  D QAI RA+RYGQT+PVF YRL+ + T+E ++++++V KE L   +V+   + R
Sbjct: 757  PADDRQAIGRAYRYGQTRPVFVYRLLCYQTLEHRMFQQKVAKEWLFHTIVEEASLKR 813


>gi|348676261|gb|EGZ16079.1| hypothetical protein PHYSODRAFT_560615 [Phytophthora sojae]
          Length = 1087

 Score =  280 bits (715), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 193/610 (31%), Positives = 304/610 (49%), Gaps = 75/610 (12%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  V +P  +   L+ HQ  G++FM++ + Q +R    G  G GCILA  MGLGKT Q I
Sbjct: 171  EIKVVVPEIVGKFLRPHQREGVQFMFDCVCQ-VR----GFDGQGCILADDMGLGKTLQSI 225

Query: 771  AFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML--EDVSRD 825
              +YT + +   +   ++ A++V P +++ NW  E +KW    +K + ++    E V + 
Sbjct: 226  TLMYTLLMTGMDMQPTVKRAIVVCPTSLVKNWDDEIIKWLHGRVKTVALYEAKRETVIKG 285

Query: 826  RRAELLAKWRAKGG----VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 881
                +    R + G    V +I Y  FR      H +      E C       ++L+CDE
Sbjct: 286  INQFIEGSKRPRPGFSAQVLIISYETFR-----MHAQKFADTPECC-------ELLICDE 333

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
            AH +KN  +   +AL  + C++R+ L+G+P+QN+L E++ MVDF     LG+  EFR  +
Sbjct: 334  AHRLKNANSQINKALSSLACRKRVLLSGTPMQNDLEEFFAMVDFTNPNILGTPSEFRKNY 393

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
              PI  G+  +ST  +  +    S +L E +  F+ R    +  K LPPK + VI   LS
Sbjct: 394  LGPILVGREPDSTDRERGVAQSCSAMLCEIVNQFILRRGNILNAKHLPPKLMQVICCPLS 453

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL------QLTKDKG 1055
            PLQ +LY  FL        R   ++   +  +   AL ++ NHP ++        TK  G
Sbjct: 454  PLQEQLYMHFLSSSAC---RDMMKRQSANVLSSITALKKLCNHPLLIFDEMGKTNTKLPG 510

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
            + S      S++ E+ D                    D+G  ++  +        Y E  
Sbjct: 511  F-SNCAQYFSAAKESRDTG-----------------GDNGLHRRGGFGG---RTCYPE-- 547

Query: 1116 YSGKMVLLLD--ILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
            +SGKM LLLD  +  M     D+ ++ S    TLD++     +   P            +
Sbjct: 548  WSGKM-LLLDRLMFAMRKTTTDRIVIVSNYTQTLDVVSTLCQERHLP------------F 594

Query: 1174 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
             RLDG T + +R+KLV+ FN+P        L+S++AG  G+NL  ANR+++ D  WNP  
Sbjct: 595  VRLDGTTSAKKRKKLVDTFNDPTTNSF-AFLLSSKAGGCGLNLIGANRLVLFDPDWNPAT 653

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEE 1293
            D QA  R WR GQ K  + YR +A GT+EEKI++RQ++KEGL   V D+++V+ ++S ++
Sbjct: 654  DKQAAARVWREGQKKMCYVYRFLATGTLEEKIFQRQLSKEGLQNIVDDKEEVN-SLSSKD 712

Query: 1294 MLHLFEFGDD 1303
            +  LF F  D
Sbjct: 713  LKRLFVFRKD 722


>gi|315048351|ref|XP_003173550.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum
            CBS 118893]
 gi|311341517|gb|EFR00720.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum
            CBS 118893]
          Length = 1808

 Score =  279 bits (714), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 196/624 (31%), Positives = 313/624 (50%), Gaps = 92/624 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            I  ++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QVI+ L T   +
Sbjct: 891  IGRRVKEHQISGIQFMWRELIKD-------EKNEGCLLAHTMGLGKTMQVISLLVTIANA 943

Query: 780  VNLG-----------LRTA--LIVTPVNVLHNWKQEFMKWRPSE------LKPLRVFMLE 820
             N              RT+  LI  P +++ NW +EF KW P +      L  +R  + +
Sbjct: 944  SNSSDPKIKAQVPERFRTSRTLITCPASLIDNWDEEFAKWTPPDAATRYNLGQVRKIVSQ 1003

Query: 821  DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSF--GKHVKDRNMAREICHALQ----DGP 874
            D  +  R   +  W  +GGV LI +   R +     +    + +  E C  ++    DGP
Sbjct: 1004 DPIQ--RLYTINGWYTEGGVLLISHELLRRMIHYNAQKAAFQRLPAEKCEIIKRQLLDGP 1061

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            +I+V DEAH +KN  ++ ++A    K + RIALTGSPL N L++YY M++++  G+LG+ 
Sbjct: 1062 NIVVADEAHKLKNGASNLSKACTMFKSKSRIALTGSPLSNQLIDYYQMINWISPGYLGTL 1121

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             +F+ +++ PI  G + +ST+ +     ++  +L + L+  V R  ++V++KDLP K  F
Sbjct: 1122 KQFKAKYEEPIREGLYFDSTNAEYVKSRKKLEVLKKVLEPKVNRAGVSVIQKDLPSKVEF 1181

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-----ILQ 1049
            VI +  +PLQ+  Y +F+ L      +   E  R      Y  L  + +HP      IL+
Sbjct: 1182 VIYIPPTPLQKETYNQFVSLT--MEGKGEFEFTRLWVLLSY--LTLLCHHPSCFLRRILE 1237

Query: 1050 LTKDKG----------------YPSREDAE---DSSSDENMDYNVVIGEKPRNMNDFLQG 1090
              K++                  PS  + E   DS +   ++ +V+  E    + D +  
Sbjct: 1238 KKKERSQVIERENAVEGGQGIVIPSESEPEANPDSPTAITIEDDVLETEGQTAITDEVVS 1297

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDY---SGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
            + +  F               K LD    S +  ++  I+      GDK L+FS  + TL
Sbjct: 1298 QFEQKF------------KGIKSLDSPENSHRTQMVGRIVDESIKTGDKVLIFSGYLHTL 1345

Query: 1148 DLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
                 YL  +        L  +G+ + RLDG+T  + RQ   + F+   +      LIST
Sbjct: 1346 T----YLGSM--------LEARGQKFCRLDGKTPIATRQTATKNFS---DSDAHVYLIST 1390

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
            +AG+LG+N+  ANRVII +  +NPT++ QAI RA+R GQ K VF YR +  GT EE I++
Sbjct: 1391 KAGALGLNIIGANRVIIFESEYNPTWEEQAIGRAYRLGQAKDVFVYRFVMGGTFEELIHE 1450

Query: 1268 RQVTKEGLAARVVDRQQVHRTISK 1291
            + V K+ +A R VD++   R+  K
Sbjct: 1451 KGVFKKNMALRAVDKKNPTRSTGK 1474


>gi|380792667|gb|AFE68209.1| helicase ARIP4, partial [Macaca mulatta]
          Length = 622

 Score =  279 bits (713), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 148/357 (41%), Positives = 213/357 (59%), Gaps = 42/357 (11%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+   +VN+     EE V +   ++  +K HQ+ GIRF+++N+++S+ + K+   G GC
Sbjct: 243  DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSS-GFGC 301

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 806
            ILAH+MGLGKT QVI+F+    R  +   +T L + PVN L NW  EF  W         
Sbjct: 302  ILAHSMGLGKTLQVISFVDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359

Query: 807  --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 857
              +P E++P   +V +L D  +    RA+++A W ++GGV L+GY  +R L+  K     
Sbjct: 360  DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419

Query: 858  --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 896
                                + +   RE   AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420  RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            K ++ +RR+ LTG PLQNNL+EY+CMVDFVR  FLG+  EF N F+ PI NGQ  +ST +
Sbjct: 480  KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
            DV++M  RSH+L+  L+GFVQR    V+K  LP K   VI V+LS +QR LY +F+D
Sbjct: 540  DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMD 596


>gi|326468582|gb|EGD92591.1| hypothetical protein TESG_00164 [Trichophyton tonsurans CBS 112818]
          Length = 1811

 Score =  279 bits (713), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 198/622 (31%), Positives = 318/622 (51%), Gaps = 93/622 (14%)

Query: 723  KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVN- 781
            ++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QVIA L T   + N 
Sbjct: 862  RIKEHQLSGIQFMWRELIKD-------EKNEGCLLAHTMGLGKTMQVIALLVTIANASNS 914

Query: 782  ------------LGLRTALIVTPVNVLHNWKQEFMKWRPSE------LKPLRVFMLEDVS 823
                          +   LI  P +++ NW++EF KW P +      L  +R  + +D  
Sbjct: 915  SDPKINEQIPERFRISRTLITCPASLIDNWEEEFAKWTPPDAATRDNLGLVRKVVTQDPI 974

Query: 824  RDRRAELLAKWRAKGGVFLIGYTAFRNLSF--GKHVKDRNMAREICHALQ----DGPDIL 877
            +  R   +  W  +GGV LI +   R +     + +  + ++ + C  L+    DGP+I+
Sbjct: 975  Q--RLYTINSWYTEGGVLLISHELLRRMILYNPQKIGLQRLSAKQCEILKRQLLDGPNIV 1032

Query: 878  VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEF 937
            V DEAH +KN  ++ ++A    K + RIALTGSPL N L++YY MV+++   +LG+  +F
Sbjct: 1033 VADEAHKMKNGASNLSKACSMFKSKSRIALTGSPLSNQLIDYYQMVNWISPNYLGTLKQF 1092

Query: 938  RNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 997
            + +++ PI  G + +ST+ +     ++  +L + L+  V R  ++V++KDLP K  FVI 
Sbjct: 1093 KAKYEEPIREGLYYDSTNAEYVKSRKKLEVLKKVLEPKVNRAGISVLQKDLPSKFEFVIY 1152

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-----ILQLTK 1052
            +  +PLQ+  Y +F+ L      +   E  R      Y  L  + +HP      IL+  K
Sbjct: 1153 IPPTPLQKETYNQFVTLT--MEGKGEFEFTRLWVLLSY--LTLLCHHPSCFLRRILEKKK 1208

Query: 1053 DK-----------GYPSREDAEDSSSDENM-DYNVVIGEKPRNMNDFLQ--GKND----- 1093
            ++           G P      +S  + N+ D +++I  +    +D L+  G+       
Sbjct: 1209 ERSQAIEREKAIEGGPGVAVPSESEPETNVDDSSILITVE----DDILEIAGQTTITDEV 1264

Query: 1094 -DGFFQKDWWNDLLHEHTYKELDY---SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               F QK  + D+      K+LD    S +  ++  I+      GDK L+FS  + TL  
Sbjct: 1265 VSQFEQK--FKDI------KDLDSPENSHRTQMVGQIIDESIKAGDKILIFSGYLHTLS- 1315

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               YL  +        L  +G  + RLDG+T  + RQ     F    +  V   LIST+A
Sbjct: 1316 ---YLGSM--------LEARGHKYCRLDGKTPIATRQAATRDFR---DSDVHVYLISTKA 1361

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G+LG+N+  ANRVII +  +NPT++ QAI RA+R GQTK VF YR +  GT EE I+++ 
Sbjct: 1362 GALGLNIIGANRVIIFESEYNPTWEEQAIGRAYRLGQTKDVFVYRFIMGGTFEELIHEKG 1421

Query: 1270 VTKEGLAARVVDRQQVHRTISK 1291
            V K+ +A R +D++   R+  +
Sbjct: 1422 VFKKNMALRAIDKKNPTRSTGR 1443


>gi|255082185|ref|XP_002508311.1| SNF2 super family [Micromonas sp. RCC299]
 gi|226523587|gb|ACO69569.1| SNF2 super family [Micromonas sp. RCC299]
          Length = 1126

 Score =  279 bits (713), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 195/601 (32%), Positives = 291/601 (48%), Gaps = 86/601 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++FM+E ++  +R    G +G GCILA  MGLGKT Q I  L+T ++    G
Sbjct: 176  LRPHQREGVKFMFECVM-GLR----GFEGNGCILADDMGLGKTLQGITLLWTLLKQGITG 230

Query: 784  ----LRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLAKWRAK 837
                 + ALIV P +++ NW  E +KW   +++  P+      DV       L      +
Sbjct: 231  DGPIAKRALIVCPTSLVSNWDDECIKWLKGKVRTMPICEANRADVISSMNRFLNYNGHDR 290

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              V ++ Y  FR      H    +    +        D+++CDEAH +KN    T +AL 
Sbjct: 291  AQVMIVSYETFR-----IHADRFDKPNSV--------DLIICDEAHRLKNGDTLTNKALG 337

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             V C RR+ L+G+P+QN+L E+Y MV+F   G LG+  EF  +F+ PI +G+  ++T + 
Sbjct: 338  SVPCLRRVMLSGTPMQNHLDEFYSMVNFCNPGLLGTGGEFYKKFEKPILDGREPDATEKQ 397

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
            + +  +R+  L E +  FV R    ++ K LPPK V V+  KLSPLQ+ +Y+ FL     
Sbjct: 398  LALAQERNGELSELVNKFVLRRTNTILSKHLPPKVVEVVCCKLSPLQQMIYRHFL----- 452

Query: 1018 TNDRVSNEKIRKSFFAGYQA--------LAQIWNHPGILQ------LTKDKGYPSREDAE 1063
                  +EK  K+   G  A        L ++ NHP ++        T +KG    E   
Sbjct: 453  ------SEKAAKTIATGKSAMVLAAITGLKKLCNHPKLIHDMISAAKTTNKGAAGFESCA 506

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
            D   D   D       + R      +G           W   LH         SGK  +L
Sbjct: 507  DFFGDGLYDSGARGHGRERGGGGLPEG-----------WE--LH---------SGKFAVL 544

Query: 1124 LDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTES 1182
              +L +      D+ ++ S    TLDLI+        P            + RLDG T  
Sbjct: 545  ARLLAILRKETKDRVVIISNYTQTLDLIQTLCRNNRYP------------FCRLDGSTSI 592

Query: 1183 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1242
            S+RQKLV+RFN+P        L+S++AG  GINL   NR+++ D  WNP  D QA  R W
Sbjct: 593  SKRQKLVKRFNDPAED-CFVFLLSSKAGGCGINLIGGNRLVLFDPDWNPANDKQAAARCW 651

Query: 1243 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR-TISKEEMLHLFEFG 1301
            R GQ K  + YR +A G++EEK+++RQ++KE L   V     + + ++SKEE+  LF   
Sbjct: 652  RDGQKKKCYLYRFLATGSIEEKVFQRQLSKESLQNVVNGEGTLEQSSMSKEELRRLFTLD 711

Query: 1302 D 1302
            D
Sbjct: 712  D 712


>gi|322707220|gb|EFY98799.1| chromatin-remodeling complex ATPase chain isw-1 [Metarhizium
            anisopliae ARSEF 23]
          Length = 1679

 Score =  278 bits (712), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 192/603 (31%), Positives = 297/603 (49%), Gaps = 78/603 (12%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQS--IRKVKSGDKGLGCILAH 759
            I+N  ++  +  + I + I  ++K HQ+ G+RFMW  IIQ   +R+        GC+L+H
Sbjct: 769  IINESKQDDQSFIYINNEIGPRIKDHQIDGVRFMWNQIIQDPELRQ--------GCLLSH 820

Query: 760  TMGLGKTFQVIAFLYTAMRSV-------------NLGLRTALIVTPVNVLHNWKQEFMKW 806
            +MGLGKT QVI  L     S              +L     L+  P  +++NW  E + W
Sbjct: 821  SMGLGKTMQVITLLVAIQESSKSSDKSIVSQIPEDLRQSKTLVTCPAGLVNNWVDEILIW 880

Query: 807  RPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
                +      +   +S + R   + +W   GGV +IGY   R +S  +  K+R++    
Sbjct: 881  DNDRVLGDLHVIDSTLSIEERLTAVQEWSQTGGVLVIGYPMLRRVS-DELDKERSLL--- 936

Query: 867  CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              ++ D P+I++ DEAH +KN ++       + +   RIA+TGSPL NN+ EYY M+++V
Sbjct: 937  --SIFDEPNIVIADEAHALKNPKSRLNLVCSRFRATSRIAMTGSPLANNIEEYYFMINWV 994

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV-VK 985
               FLG   EFR  + NPI +G    S+  D +   ++   L + +   V R  +N  ++
Sbjct: 995  APNFLGPVEEFREIYSNPISHGVDLGSSGVDKRKALKKLEALKQIVAPKVHRATVNTCMQ 1054

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWN 1043
            KDLP K  FVI VK  PLQ +LY  F   + G +   +  E +++ + F     L  + N
Sbjct: 1055 KDLPSKQEFVICVKPKPLQVKLYNLFAQIIRGESVGYIQGEAELKGAVFRVTNDLTLLCN 1114

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP          Y   E A ++      +     G  P             G        
Sbjct: 1115 HP----------YAFYEKAIETQDPPKAESKQKAGLPP-------------GIIPA---- 1147

Query: 1104 DLLHEHTYKEL---DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
             +L E    E      S K+ LL+ IL       DK LVFS SIPTL+    YLS     
Sbjct: 1148 -VLAEFARIETRCPSLSTKVELLIQILDDAKRSKDKVLVFSHSIPTLN----YLS----- 1197

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
               G   ++ + + RLDG+T  ++RQ+ +++FN       +  LISTRAG +G+N+  AN
Sbjct: 1198 ---GLFQEQKRLFSRLDGKTPIAKRQEEIKKFNA---NHTEVYLISTRAGGVGLNIQGAN 1251

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            +V+I+D  WNP ++ QAI R++R GQ+KPV  Y  +  GT E+ ++ R + K  LA RVV
Sbjct: 1252 KVVILDSKWNPVHEQQAIGRSYRIGQSKPVSVYYFVTAGTFEQDLHGRAIFKTQLATRVV 1311

Query: 1281 DRQ 1283
            D++
Sbjct: 1312 DKK 1314


>gi|303279422|ref|XP_003059004.1| SNF2 super family [Micromonas pusilla CCMP1545]
 gi|226460164|gb|EEH57459.1| SNF2 super family [Micromonas pusilla CCMP1545]
          Length = 1131

 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 188/598 (31%), Positives = 294/598 (49%), Gaps = 89/598 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNL 782
            L+ HQ  G++FM+E ++  +R       G GCILA  MGLGKT Q I  L+T + + V  
Sbjct: 177  LRPHQREGVKFMFECVM-GLRDFD----GRGCILADDMGLGKTLQGITLLWTMLCQGVVT 231

Query: 783  GLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW----- 834
            G  TA   LIV P +++ NW  E  KW    +K L       +    RA++++       
Sbjct: 232  GTPTAKRALIVCPTSLVSNWDDECNKWLKGRVKTL------PICESSRADVISSVNRFLS 285

Query: 835  -RAKGGVFLIGYTAFRNLS--FGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRAD 891
             R    V ++ Y  FR  +  FG                +D   +++CDEAH +KN    
Sbjct: 286  PRNTAQVMIVSYETFRIHAERFGA---------------EDSVQLVMCDEAHRLKNGDTL 330

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
            T +AL+ V C+RR+ L+G+P+QN+L E+Y MV+F   G LG++ EF   ++ PI +G+  
Sbjct: 331  TNKALQSVPCRRRVMLSGTPMQNHLDEFYSMVNFCNPGLLGTTAEFHKHYEKPILDGREP 390

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
            ++T + + +  +R+  L E +  FV R    ++ K LPPK V V+  KLSPLQ++LY+ F
Sbjct: 391  DATEKQLALAQERNAELSELVNKFVLRRTNTILSKHLPPKVVEVVCCKLSPLQQQLYQHF 450

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
            LD             +     A   AL ++ NHP ++                       
Sbjct: 451  LDSKAAKAALTGKSTM---VLAAITALKKLCNHPKLI----------------------- 484

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD-------YSGKMVLLL 1124
             Y+++  EK  N      G    G + +    D+   H   +         +SGK  +L 
Sbjct: 485  -YDMINAEK--NTGSAAAGFESCGAYFQPGMYDVRGPHGRGKSGMCDGWEFHSGKFAVLA 541

Query: 1125 DILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
             +L +  +   D+ ++ S    TLDL++F   +   P              RLDG T  +
Sbjct: 542  RLLAILRAETKDRIVIISNYTQTLDLVQFLCKQNNYP------------HCRLDGGTSIT 589

Query: 1184 ERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1243
            +RQKLV +FN+P  +     L+S++AG  GINL   NR+++ D  WNP  D QA  R WR
Sbjct: 590  KRQKLVRQFNDP-TENCFVFLLSSKAGGCGINLIGGNRLVLFDPDWNPANDKQAAARCWR 648

Query: 1244 YGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR-TISKEEMLHLFEF 1300
             GQ K  + YRL A G++EEK+++RQ++KE L   V     + + ++SK+++  LF  
Sbjct: 649  DGQKKKCYLYRLFATGSIEEKVFQRQLSKESLQNVVNGEGTLEQSSLSKDDLRKLFTL 706


>gi|326479937|gb|EGE03947.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97]
          Length = 1838

 Score =  278 bits (710), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 198/622 (31%), Positives = 318/622 (51%), Gaps = 93/622 (14%)

Query: 723  KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVN- 781
            ++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QVIA L T   + N 
Sbjct: 889  RIKEHQLSGIQFMWRELIKD-------EKNEGCLLAHTMGLGKTMQVIALLVTIANASNS 941

Query: 782  ------------LGLRTALIVTPVNVLHNWKQEFMKWRPSE------LKPLRVFMLEDVS 823
                          +   LI  P +++ NW++EF KW P +      L  +R  + +D  
Sbjct: 942  SDPKINEQIPERFRISRTLITCPASLIDNWEEEFAKWTPPDAATRDNLGLVRKVVTQDPI 1001

Query: 824  RDRRAELLAKWRAKGGVFLIGYTAFRNLSF--GKHVKDRNMAREICHALQ----DGPDIL 877
            +  R   +  W  +GGV LI +   R +     + +  + ++ + C  L+    DGP+I+
Sbjct: 1002 Q--RLYTINSWYTEGGVLLISHELLRRMIHYNPQKIGLQRLSAKQCEILKRQLLDGPNIV 1059

Query: 878  VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEF 937
            V DEAH +KN  ++ ++A    K + RIALTGSPL N L++YY MV+++   +LG+  +F
Sbjct: 1060 VADEAHKMKNGASNLSKACSMFKSKSRIALTGSPLSNQLIDYYQMVNWISPNYLGTLKQF 1119

Query: 938  RNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 997
            + +++ PI  G + +ST+ +     ++  +L + L+  V R  ++V++KDLP K  FVI 
Sbjct: 1120 KAKYEEPIREGLYYDSTNAEYVKSRKKLEVLKKVLEPKVNRAGISVLQKDLPSKFEFVIY 1179

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-----ILQLTK 1052
            +  +PLQ+  Y +F+ L      +   E  R      Y  L  + +HP      IL+  K
Sbjct: 1180 IPPTPLQKETYNQFVALT--MEGKGEFEFTRLWVLLSY--LTLLCHHPSCFLRRILEKKK 1235

Query: 1053 DK-----------GYPSREDAEDSSSDENM-DYNVVIGEKPRNMNDFLQ--GKND----- 1093
            ++           G P      +S  + N+ D +++I  +    +D L+  G+       
Sbjct: 1236 ERSQAIEREKAIEGGPGVAVPSESEPETNVDDSSILITVE----DDILEIAGQTTITDEV 1291

Query: 1094 -DGFFQKDWWNDLLHEHTYKELDY---SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               F QK  + D+      K+LD    S +  ++  I+      GDK L+FS  + TL  
Sbjct: 1292 VSQFEQK--FKDI------KDLDSPENSHRTQMVGQIIDESIKAGDKILIFSGYLHTLS- 1342

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               YL  +        L  +G  + RLDG+T  + RQ     F    +  V   LIST+A
Sbjct: 1343 ---YLGSM--------LGARGHKYCRLDGKTPIATRQAATRDFR---DSDVHVYLISTKA 1388

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G+LG+N+  ANRVII +  +NPT++ QAI RA+R GQTK VF YR +  GT EE I+++ 
Sbjct: 1389 GALGLNIIGANRVIIFESEYNPTWEEQAIGRAYRLGQTKDVFVYRFVMGGTFEELIHEKG 1448

Query: 1270 VTKEGLAARVVDRQQVHRTISK 1291
            V K+ +A R +D++   R+  +
Sbjct: 1449 VFKKNMALRAIDKKNPTRSTGR 1470


>gi|242023584|ref|XP_002432212.1| steroid receptor-interacting snf2 domain protein, putative [Pediculus
            humanus corporis]
 gi|212517609|gb|EEB19474.1| steroid receptor-interacting snf2 domain protein, putative [Pediculus
            humanus corporis]
          Length = 2665

 Score =  278 bits (710), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/383 (39%), Positives = 220/383 (57%), Gaps = 43/383 (11%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            IVNV   + E  + +   I+  +K HQ+ GIRF+++N+I+SI +  S   G GCILAH+M
Sbjct: 758  IVNVGHPESESDLYLAPQIAKIIKPHQIGGIRFLYDNVIESIERFSSS-AGFGCILAHSM 816

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP----SELKPLRVF 817
            GLGKT Q+++F    +R      +T L + P+N + NW  EF  W P    SE    R F
Sbjct: 817  GLGKTLQIVSFSDIFLRYT--SAKTILCIMPINTIQNWLAEFNMWLPKGESSEEMRCRDF 874

Query: 818  MLEDVSRD-----RRAELLAKWRAKGGVFLIGYTAFRNLSFGKH--------------VK 858
             L  V+        RA+++  W+  GGV L+GY  FR LS  K               +K
Sbjct: 875  DLFIVNESLKNIHARAKVILDWQKAGGVLLMGYELFRLLSLKKSHKSKKKKRDFEETDLK 934

Query: 859  DRNMAREICHALQ-DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLM 917
            ++ +  E+  AL   GPD+++CDE H IKN+ A T+QALKQ++ +RRI LTG PLQNNL+
Sbjct: 935  NKELIEEVYSALVVPGPDLVICDEGHRIKNSHASTSQALKQIRTKRRIVLTGYPLQNNLL 994

Query: 918  EYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQ 977
            EY+CMVDFVR  +LG+  EF N F+ PI+NGQ  +ST +D ++M  R+H+L+  L+GFVQ
Sbjct: 995  EYWCMVDFVRPNYLGTKTEFSNMFERPIQNGQCIDSTPQDKRLMRYRAHVLHSLLEGFVQ 1054

Query: 978  RMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIR----KSFFA 1033
            R    V++  LP K  +V+ ++ +  QR+LY  F+           NE +R     +   
Sbjct: 1055 RRSHAVLQSTLPEKEEYVLLLRFTAFQRKLYDTFM-----------NEVVRTVAVPNPLK 1103

Query: 1034 GYQALAQIWNHPGIL-QLTKDKG 1055
             +    +IWNHP +L    K KG
Sbjct: 1104 AFAVCCKIWNHPDVLYNFLKRKG 1126



 Score =  179 bits (454), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/217 (43%), Positives = 128/217 (58%), Gaps = 12/217 (5%)

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
            K +D     DW  DL   +    ++ S KM +   I+T    + D+ LVFSQS+ TLDLI
Sbjct: 1668 KKEDTSLPYDWVGDLFKNYVTGVIENSSKMEVFFQIVTESVKLNDRILVFSQSLLTLDLI 1727

Query: 1151 EFYLSKLPRPGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRV 1200
            E YL +   P K+ +          +W K K+++RLDG T   ER+KL+  FN   N  +
Sbjct: 1728 EVYLHQQKVPNKEEEGEGGGGGGEEVWTKNKNYFRLDGSTPGLEREKLINEFN--ANPNI 1785

Query: 1201 KCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGT 1260
               L+STRAGSLGINL  ANRVI+ D SWNP +D QA+ R +RYGQ K  F YRL+    
Sbjct: 1786 HMFLVSTRAGSLGINLVGANRVIVFDASWNPCHDTQAVCRVYRYGQRKQCFVYRLVMDSC 1845

Query: 1261 MEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
            +E+KIY RQV K+G+A RVVD       +S +E+ +L
Sbjct: 1846 LEKKIYDRQVNKQGMADRVVDELNPDAHLSIKEVTNL 1882


>gi|357143796|ref|XP_003573054.1| PREDICTED: DNA repair and recombination protein RAD54-like
            [Brachypodium distachyon]
          Length = 965

 Score =  278 bits (710), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 195/608 (32%), Positives = 314/608 (51%), Gaps = 86/608 (14%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
            A+ + + +   L+ HQ  G++FM++     +  + S D   GCILA  MGLGKT Q IA 
Sbjct: 210  AIEVDNLLVRYLRPHQREGVQFMFD----CVSGLLSDDGIAGCILADDMGLGKTLQSIAL 265

Query: 773  LYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            LYT +     G   ++ A+IVTP +++ NW+ E  KW   +++      L  +    RA+
Sbjct: 266  LYTLLAQGFDGKPMVKRAVIVTPTSLVSNWESEISKWLKGKVQ------LLALCESTRAD 319

Query: 830  LLA------KWRAKGGVFLIGYTAFRNLS--FGKHVKDRNMAREICHALQDGPDILVCDE 881
            +L+      K  ++  V +I Y  FR  S  F +           C       D+L+CDE
Sbjct: 320  VLSGIGSFLKPLSRLQVLIISYETFRMHSSKFERPAS--------C-------DLLICDE 364

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
            AH +KN +  T +AL  + C RRI L+G+P+QN+L E++ MV+F   G LG +  FR  +
Sbjct: 365  AHRLKNDQTLTNKALAALPCTRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDAAYFRRYY 424

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
            + PI  G+   +T+E+ K+ ++RS  L  ++  F+ R    ++   LPPK V V+  KL+
Sbjct: 425  EAPIICGREPTATAEEKKLGSERSGELSAKVNQFILRRTNALLSNHLPPKIVEVVCCKLT 484

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSRE 1060
            PLQ  LY  F  +H     R+ +E+ ++S    Y  AL ++ NHP ++            
Sbjct: 485  PLQTTLYNHF--IHSKNVKRLISEEAKRSKILAYITALKKLCNHPKLIY----------- 531

Query: 1061 DAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKM 1120
            D   S+     D++  +   P    +  QG++         W +L           SGKM
Sbjct: 532  DTIKSNKSGGSDFDDCLRFFP---PELFQGRSGSWTGGGGMWVEL-----------SGKM 577

Query: 1121 VLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
             +L  +L  +     D+ ++ S    TLDL     ++L R        ++   + RLDG 
Sbjct: 578  HVLARLLGHLRLKTDDRIVLVSNYTQTLDL----FAQLCR--------ERRYPYVRLDGA 625

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
            T  ++RQKLV +FN+ L++     L+S++AG  G+NL   NR+++ D  WNP  D QA  
Sbjct: 626  TSINKRQKLVNQFND-LSRDEFVFLLSSKAGGCGLNLVGGNRLVLFDPDWNPANDKQAAA 684

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR-------TISKE 1292
            R WR GQ K V+ YR ++ GT+EEK+Y+RQ++KEGL  +V+ ++Q +        ++S E
Sbjct: 685  RVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQGNTKMQDQGCSLSTE 743

Query: 1293 EMLHLFEF 1300
            ++  LF F
Sbjct: 744  DLRDLFTF 751


>gi|302406098|ref|XP_003000885.1| 5-aminolevulinate synthase [Verticillium albo-atrum VaMs.102]
 gi|261360143|gb|EEY22571.1| 5-aminolevulinate synthase [Verticillium albo-atrum VaMs.102]
          Length = 1673

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 200/663 (30%), Positives = 309/663 (46%), Gaps = 146/663 (22%)

Query: 655  EKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEE-- 712
            EK+ Q+  + L++Q     +L  S T+ GD S               I+NV + KG++  
Sbjct: 791  EKQAQDEERRLKLQ----QRLAASATISGDRSR-------------LIINVSK-KGDDDK 832

Query: 713  -AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
              V +   I+ ++K HQ+ G+RFMW  ++       +G +G  C+LAHTMGLGKT Q+I 
Sbjct: 833  DFVYVNDEIARRIKDHQIEGVRFMWNQVV-------AGKQG--CLLAHTMGLGKTMQIIT 883

Query: 772  FLYT---AMRSVNLGLRT----------ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFM 818
             L     A  S    +R            L++ P  ++ NW++E   W    +   R  +
Sbjct: 884  LLIAITEASASPEPSIRAQIPKRLQRSQTLVICPTGLVDNWREELTAWDKHSVLGERYTV 943

Query: 819  LEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLS-----FGKHVKDRNMAREICHALQDG 873
                    R   L +W  +GGV ++GY   R+L+     F K + DR             
Sbjct: 944  DSKQDSVTRTSTLQEWDVRGGVLILGYDMLRSLARADERFKKILTDR------------- 990

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
            P+I+V DEAH +KN ++       Q +   RIALTGSPL NN+ E+Y M+D+V + +LG 
Sbjct: 991  PNIVVADEAHRLKNQKSKLAAIGSQFQTPSRIALTGSPLANNVGEFYSMIDWVADNYLGP 1050

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
              EF   +  PI+ G + +S+  + ++  +R  IL + +     R+ +  +K +LP K  
Sbjct: 1051 LKEFNAYYALPIQEGLYGDSSHGEYRLAKKRLAILEKTVAPKTHRLTIKALKNELPDKVE 1110

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD 1053
            F +TV L+PLQ  LY                                       L L K+
Sbjct: 1111 FFLTVPLTPLQEELYD--------------------------------------LYLVKE 1132

Query: 1054 KGYPSREDAEDSSSDEN-----MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
            K  P      D++ D++     +  +V I  + R++ND                      
Sbjct: 1133 KNMPRVPQGGDTTQDKSITPAFLTKSVKILNRCRDLND---------------------- 1170

Query: 1109 HTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK 1168
                 +  S K+ +L+ IL  C    +K L+FSQSIPT+D +     +  RP        
Sbjct: 1171 -----IGLSWKVKVLIAILDECRKHKEKVLIFSQSIPTIDWLSTLFQQQQRP-------- 1217

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
                + RL G T  S RQ +V+ FNE  N   +  +IST+AG  G+N+  A+RV+I D  
Sbjct: 1218 ----YSRLTGDTLPSIRQSMVKNFNEGDN---EIFVISTQAGGQGLNITGASRVVIFDFR 1270

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT 1288
            +NP  + QAI RA+R GQ+KPV  YR ++ GT E+ +Y + V K  LA+RVVD+    R 
Sbjct: 1271 FNPIAEQQAIGRAYRIGQSKPVVVYRFVSGGTYEQHLYNKAVWKMQLASRVVDKDNPKRW 1330

Query: 1289 ISK 1291
             +K
Sbjct: 1331 STK 1333


>gi|313227061|emb|CBY22208.1| unnamed protein product [Oikopleura dioica]
          Length = 581

 Score =  277 bits (709), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 166/461 (36%), Positives = 249/461 (54%), Gaps = 52/461 (11%)

Query: 635  IRRILDDAELGEETKRKIAIEKERQERLKSLQ--------VQFSSKSKLMNSVTLDGDLS 686
            IR+I +D EL +ET+     E+ER ERL+           ++ ++     + +   G+++
Sbjct: 73   IRKIKEDLELEKETQDARKEEQERLERLRLRNFVDLSHDDLKKTAADDSDDDIICMGEVT 132

Query: 687  AGASIEVLG-------------DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIR 733
              A  E                D     +VNV   + E++V + S +  K+KAHQ+ GIR
Sbjct: 133  ETAEEEDTANSGLHTNDDRNKPDQYGRILVNVNHPQDEDSVFLASQLQGKIKAHQIGGIR 192

Query: 734  FMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPV 793
            FM++N I+S+++ +S   G GC+LAH MGLGKT QVI+F    +R  + G +  +I+ PV
Sbjct: 193  FMYDNTIESLKRCRSS-AGFGCVLAHAMGLGKTLQVISFTDVILR--HTGHKYVMIIVPV 249

Query: 794  NVLHNWKQEFMKWRP-----SELKPLRVFMLEDV--------SRDRRAELLAKWRAKGGV 840
            N + NWK EF  W P     S   P   +    V        S D R  L+  WR+ GG 
Sbjct: 250  NTIQNWKAEFATWLPERPATSPPDPKVSYRTNPVYCVDERCNSIDARLALIKGWRSTGGS 309

Query: 841  FLIGYTAFRNLSFGKHVKDRN--------MAREIC--HALQDGPDILVCDEAHMIKNTRA 890
             ++GY  FR L   K +K  +        M  + C  + L  G D+++CDE H IKN +A
Sbjct: 310  LIVGYETFRILVTPKKLKKNSTVPDQHHLMMLQECQKYLLDPGADLVICDEGHRIKNEKA 369

Query: 891  DTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH 950
            + ++AL +++ +RR+ LTG+PLQNNL+EY+ MVDFVR   LGS +EF+N F  PI NGQ 
Sbjct: 370  ELSKALSKIRTKRRVILTGTPLQNNLIEYWTMVDFVRPRLLGSKNEFQNMFVAPITNGQS 429

Query: 951  TNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKR 1010
             N+T +D + M  RSH+L+E LKG VQR    V+  DLP K  +++ V+LS  Q   Y++
Sbjct: 430  KNATQDDRRQMKYRSHVLHELLKGCVQRRSHMVLCDDLPAKNEYILMVRLSQQQIPYYQK 489

Query: 1011 FLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
            F  L    ++  S   +       +   ++IWNHP +L  T
Sbjct: 490  FTQLKNEESEEGSMNAV-----VAHATCSKIWNHPDLLYRT 525


>gi|256081844|ref|XP_002577177.1| transcriptional regulator atrx homolog (X-linked nuclear protein-1)
            [Schistosoma mansoni]
          Length = 1673

 Score =  276 bits (707), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 151/364 (41%), Positives = 212/364 (58%), Gaps = 29/364 (7%)

Query: 630  KQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGA 689
            K +KKIR+I     L E TK   A E+ER+ RL   Q       K+ N   +        
Sbjct: 835  KGRKKIRKIFTANRLSETTKAAEACEQERRRRLAERQ-------KMYNEFIVQD------ 881

Query: 690  SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSI-----R 744
                 G+ I      +  + G+  + +   I   LK HQV  +RF+W+  I+S+     +
Sbjct: 882  -----GEGINAVTTKLTLDPGDPVIEVHPDIVKYLKPHQVEAVRFLWDCTIESVEHQTSQ 936

Query: 745  KVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV-NLGLRTALIVTPVNVLHNWKQEF 803
               S   G G ILAH MGLGKT  VI+FL+T +R   ++ +RT LI+ PVN L NWK E+
Sbjct: 937  GEPSPSTGSGAILAHCMGLGKTLSVISFLHTLLRYPEHVHIRTCLIICPVNTLLNWKHEW 996

Query: 804  MKWRPSELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRN--LSFGKHVKDR 860
              W P E +P+ VF L   + +R + +++  W   GGV LIGY  FRN  ++  K  + +
Sbjct: 997  DIWLP-EAEPVDVFELASKNSNRLKLDIVKHWHKSGGVLLIGYDMFRNFIMTLMKRTRSK 1055

Query: 861  NMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 919
            ++   I  AL D GPDI+VCDE H++KN+++  T+A+ Q++  +R+ LTG+PLQNNL EY
Sbjct: 1056 DVRNTISSALLDPGPDIVVCDEGHLMKNSKSHITKAVSQIRTMKRVVLTGTPLQNNLNEY 1115

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 979
            + MVDFV+   LG+  EF NRF NPI+NGQH+NST  DV IM +R+HILY+ L G VQ  
Sbjct: 1116 HTMVDFVKPNLLGTLKEFNNRFGNPIKNGQHSNSTPRDVNIMKKRAHILYKTLDGCVQAR 1175

Query: 980  DMNV 983
              NV
Sbjct: 1176 IGNV 1179



 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 98/230 (42%), Positives = 147/230 (63%), Gaps = 13/230 (5%)

Query: 1093 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEF 1152
            D G  QK WW     +    ++D   KM +L +IL  CS++GDK ++FS S+ +LDL+E 
Sbjct: 1316 DVGECQKPWWYMFYKDEYDWQIDVGAKMDVLFNILKRCSDIGDKVIMFSHSLISLDLVER 1375

Query: 1153 YLSKLPRPGKQ-----GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
            +L+++              W +G D+ R+DG    + R+ L  RFN   N R++  +IST
Sbjct: 1376 FLAEINHLSAYFSDIGHNTWIRGLDYERMDGSMNVNVRKDLQTRFNSTSNTRLRLFIIST 1435

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
            +AG LGINL SANR+I++D SWNP++D+Q+I+R++R+GQ+KPV+ YRL+A GT+EEKIY 
Sbjct: 1436 KAGGLGINLVSANRLILLDASWNPSHDIQSIFRSYRFGQSKPVYIYRLIAKGTIEEKIYD 1495

Query: 1268 RQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF--------GDDENPDPL 1309
            RQVTK+ L+ RV+D  Q+ R  S  ++  LF F        G+D+ P P+
Sbjct: 1496 RQVTKQSLSLRVIDELQIGRHFSDSDLQELFTFEPDIWNPNGNDKRPTPI 1545



 Score = 67.4 bits (163), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 13/110 (11%)

Query: 493 CTACNNVAIEVHP-------HPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSD 545
           CTAC     ++ P       HP+L VI+CK C    + +   KD    +  C WC    D
Sbjct: 104 CTAC---CCKIQPFSAPFSVHPLLKVILCKRCTMYCKSQNFAKDDAGKDDNCKWCSDGGD 160

Query: 546 LVSCKSCKTLFCTTCVKRNISEACLSDEV---QASCWQCCCCSPSLLKRL 592
           LV C +C    C  C+K+N+    L +     ++  W C  C P+ +K L
Sbjct: 161 LVCCDTCSFAICKKCIKQNLGRTYLRNIESLDESDTWSCFVCDPTPIKTL 210


>gi|302658649|ref|XP_003021026.1| SNF2 family helicase/ATPase, putative [Trichophyton verrucosum HKI
            0517]
 gi|291184901|gb|EFE40408.1| SNF2 family helicase/ATPase, putative [Trichophyton verrucosum HKI
            0517]
          Length = 1932

 Score =  276 bits (705), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 199/625 (31%), Positives = 315/625 (50%), Gaps = 99/625 (15%)

Query: 723  KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 782
            ++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QVI+ L T   + N 
Sbjct: 891  RIKEHQLSGIQFMWRELIKD-------EKNEGCLLAHTMGLGKTMQVISLLVTIANASNS 943

Query: 783  G-----------LRTA--LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA- 828
                         RT+  LI  P +++ NW++EF KW P +         +++ R R+A 
Sbjct: 944  SDPKIKEQIPRRFRTSRTLITCPASLIDNWEEEFAKWTPPD-----AVTRDNLGRVRKAI 998

Query: 829  --------ELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD--RNMAREICHALQ----DGP 874
                      +  W  +GGV LI +   R +      K   + ++ E C  L+    DGP
Sbjct: 999  SQDPIQRLRTINAWYTEGGVLLISHELLRRMILYNPQKTGLQRLSTEQCEMLKGQLLDGP 1058

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            +I+V DEAH +KN  ++ ++A    K + RIALTGSPL N L++YY MV+++   +LG+ 
Sbjct: 1059 NIVVADEAHKMKNGASNLSKACSMFKSKSRIALTGSPLSNQLIDYYQMVNWISPNYLGTL 1118

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             +F+ +++ PI  G + +ST+ +     ++  +L + L+  V R  ++V++KDLP K  F
Sbjct: 1119 KQFKAKYEEPIREGLYYDSTNAEYVKSRKKLEVLKKVLEPKVNRAGISVLQKDLPSKFEF 1178

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-----ILQ 1049
            VI +  +PLQ+  Y +F+ L      +   E  R      Y  L  + +HP      IL+
Sbjct: 1179 VIYIPPTPLQKETYNQFVALT--MEGKGEFEFTRLWVLLSY--LTLLCHHPSCFLRRILE 1234

Query: 1050 LTKDK-----------GYPSREDAEDSSSDENM-DYNVVIGEKPRNMNDFLQGKNDDG-- 1095
              K +           G P      +S  + N+ D +++I  +    +D L+ +      
Sbjct: 1235 KKKARSQVIEREKAIEGGPGVVVPSESEPEANVDDSSILITVE----DDVLEIEGQTAIT 1290

Query: 1096 ------FFQKDWWNDLLHEHTYKELDY---SGKMVLLLDILTMCSNMGDKSLVFSQSIPT 1146
                  F QK  + D+      K+LD    S +  ++  I+      GDK L+FS  + T
Sbjct: 1291 DEVVSQFEQK--FKDI------KDLDSPENSHRTQMVGQIVDESIKAGDKILIFSGYLHT 1342

Query: 1147 LDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIS 1206
            L     YL  +        L  +G  + RLDG+T  + RQ     F +         LIS
Sbjct: 1343 LS----YLGSM--------LEARGHKYCRLDGKTPIATRQAATRDFTD---SDAHVYLIS 1387

Query: 1207 TRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIY 1266
            T+AG+LG+N+  ANRVII +  +NPT++ QAI RA+R GQTK VF YR +  GT EE I+
Sbjct: 1388 TKAGALGLNIIGANRVIIFESEYNPTWEEQAIGRAYRLGQTKDVFVYRFVMGGTFEELIH 1447

Query: 1267 KRQVTKEGLAARVVDRQQVHRTISK 1291
            ++ V K+ +A R +D++   R+  K
Sbjct: 1448 EKGVFKKNMALRAIDKKNPTRSTGK 1472


>gi|242023203|ref|XP_002432025.1| DNA repair and recombination protein RAD54B, putative [Pediculus
            humanus corporis]
 gi|212517383|gb|EEB19287.1| DNA repair and recombination protein RAD54B, putative [Pediculus
            humanus corporis]
          Length = 840

 Score =  276 bits (705), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 191/597 (31%), Positives = 293/597 (49%), Gaps = 112/597 (18%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL---GCILAHTMGLGKTFQV 769
             V I  S+S KL+ HQ+ GI F++E+I+        G K +   G ILA  MGLGKT Q 
Sbjct: 241  PVYIEESLSKKLRQHQLEGIIFLYESIM--------GYKDINYNGVILADEMGLGKTLQC 292

Query: 770  IAFLYTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
            I+ ++T ++         ++  LIVTP +++ NW  EF+KW        RV ++  V   
Sbjct: 293  ISLIWTLLKQGPYNKKPVIKRVLIVTPTSLIMNWYNEFIKWLG------RVKIVPYVVNQ 346

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMI 885
            +      K+ +   V +I Y                + R + + ++   D+LVCDEAH I
Sbjct: 347  KNKPSEIKYHS---VVIISYEM--------------LIRCVNNVMEHNVDLLVCDEAHRI 389

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN+   T Q L Q+ C+++I LTG+PLQN+L E Y ++DF     LGS  +FR +F +PI
Sbjct: 390  KNSNIKTAQVLNQLNCKKKILLTGTPLQNDLQELYTLIDFANPNILGSPSQFRIQFADPI 449

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
               +  +S  + VK  N+RS  L + +  F+ R   N++K  LPP+   V+  K++  QR
Sbjct: 450  IASRQPDSNEDVVKKGNERSINLKKIINKFLLRRTRNILKNYLPPRHDIVVFCKITEPQR 509

Query: 1006 RLYKRFLDLHGFTNDRVSNEKIR-KSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAED 1064
             +Y   ++   F N + S E I   S      +L +I N+P +L   KD  Y  + D + 
Sbjct: 510  NMYNSLVN--SFLNAKESEEFIEGSSHLELITSLKKICNYPSLLN--KDDNYLEKIDIDT 565

Query: 1065 SSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLL 1124
            S                                                    GK+ + +
Sbjct: 566  S----------------------------------------------------GKLKVTV 573

Query: 1125 DIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTES 1182
            + L     +++ +K L+ S +  TL+L+E     L                 RLDG T S
Sbjct: 574  NFLKELQMTSVKEKVLIVSNATQTLNLLEKVFHVL------------NYSTCRLDGNTPS 621

Query: 1183 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1242
            ++R K+VE FN   ++ +   L+S++AG +G+N+  A+R+I+ D  WNP  DLQAI R W
Sbjct: 622  AQRNKIVEDFNT--SRDLFIFLLSSKAGGVGLNVTGASRLILFDSDWNPATDLQAISRIW 679

Query: 1243 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLF 1298
            R GQ  PVF YRL+  GT+EEKIY+RQ++K+GL    VD +      +SKEE+  LF
Sbjct: 680  RDGQKFPVFIYRLLTTGTIEEKIYQRQISKQGLCEGTVDPKSNKSIKLSKEELKELF 736


>gi|302505719|ref|XP_003014566.1| SNF2 family helicase/ATPase, putative [Arthroderma benhamiae CBS
            112371]
 gi|291178387|gb|EFE34177.1| SNF2 family helicase/ATPase, putative [Arthroderma benhamiae CBS
            112371]
          Length = 1862

 Score =  276 bits (705), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 200/622 (32%), Positives = 315/622 (50%), Gaps = 93/622 (14%)

Query: 723  KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 782
            ++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QVI+ L T   + N 
Sbjct: 891  RIKEHQLSGIQFMWRELIKD-------EKNEGCLLAHTMGLGKTMQVISLLVTIANASNS 943

Query: 783  G-----------LRTA--LIVTPVNVLHNWKQEFMKWRPSE------LKPLRVFMLEDVS 823
                         RT+  LI  P +++ NW++EF KW P +      L  +R  + +D  
Sbjct: 944  SDPKIKEQIPRRFRTSRTLITCPASLIDNWEEEFAKWTPPDAVTRDNLGRVRKAISQDPI 1003

Query: 824  RDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD--RNMAREICHALQ----DGPDIL 877
            +  R   +  W  +GGV LI +   R +      K   + ++ E C  L+    DGP+I+
Sbjct: 1004 Q--RLRTINAWYTEGGVLLISHELLRRMILYNPQKTGLQRLSTEQCEMLKGQLLDGPNIV 1061

Query: 878  VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEF 937
            V DEAH +KN  ++ ++A    K + RIALTGSPL N L++YY MV+++   +LG+  +F
Sbjct: 1062 VADEAHKMKNGASNLSKACSMFKSKSRIALTGSPLSNQLIDYYQMVNWISPNYLGTLKQF 1121

Query: 938  RNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 997
            + +++ PI  G + +ST+ +     ++  +L + L+  V R  ++V++KDLP K  FVI 
Sbjct: 1122 KAKYEEPIREGLYYDSTNAEYVKSRKKLEVLKKVLEPKVNRAGISVLQKDLPSKFEFVIY 1181

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-----ILQLTK 1052
            +  +PLQ+  Y +F+ L      +   E  R      Y  L  + +HP      IL+  K
Sbjct: 1182 IPPTPLQKETYNQFVALT--MEGKGEFEFTRLWVLLSY--LTLLCHHPSCFLRRILEKKK 1237

Query: 1053 DK-----------GYPSREDAEDSSSDENM-DYNVVIGEKPRNMNDFLQGKNDDG----- 1095
             +           G P      +S  + N+ D +++I  +    +D L+ +         
Sbjct: 1238 ARSQVIEREKAIEGGPGVVVPSESEPEANVDDSSILITVE----DDVLEIEGQTAITDEV 1293

Query: 1096 ---FFQKDWWNDLLHEHTYKELDY---SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               F QK  + D+      K+LD    S +  ++  I+      GDK L+FS  + TL  
Sbjct: 1294 VSQFEQK--FKDI------KDLDSPENSHRTQMVGQIVDESIKAGDKILIFSGYLHTLS- 1344

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               YL  +        L  +G  + RLDG+T  + RQ     F           LIST+A
Sbjct: 1345 ---YLGSM--------LEARGHKYCRLDGKTPIATRQAATRDFTA---SDAHVYLISTKA 1390

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G+LG+N+  ANRVII +  +NPT++ QAI RA+R GQTK VF YR +  GT EE I+++ 
Sbjct: 1391 GALGLNIIGANRVIIFESEYNPTWEEQAIGRAYRLGQTKDVFVYRFVMGGTFEELIHEKG 1450

Query: 1270 VTKEGLAARVVDRQQVHRTISK 1291
            V K+ +A R +D++   R+  K
Sbjct: 1451 VFKKNMALRAIDKKNPTRSTGK 1472


>gi|327281442|ref|XP_003225457.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
            carolinensis]
          Length = 1441

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 195/614 (31%), Positives = 288/614 (46%), Gaps = 114/614 (18%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            E  ++P  +  KL  +Q  G+R++WE   Q +          G IL   MGLGKT Q+IA
Sbjct: 474  EGFKVPGFLFKKLFKYQQTGVRWLWELHCQQV----------GGILGDEMGLGKTIQIIA 523

Query: 772  FL----YTAMRSVN-----LGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV 822
            FL    Y+ +R+        GL  +LIV P  V+H W +EF  W P    P RV +L + 
Sbjct: 524  FLAGLSYSKIRTRGSNYRFTGLGPSLIVCPTTVMHQWVKEFHNWWP----PFRVAVLHET 579

Query: 823  SR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 880
                 ++ +L+ +  A  G+ +  Y+  R L    H       R   H        ++ D
Sbjct: 580  GSYIKKKVKLIREIAACNGILITSYSYVRLLQESIH-------RYNWH-------YVILD 625

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H I+N  A  T A KQ     RI L+GSP+QNNL E + + DFV  G LG+   F  +
Sbjct: 626  EGHKIRNPNAAVTLACKQFSTPHRIILSGSPIQNNLKELWSLFDFVFPGKLGTLPVFMEQ 685

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVITV 998
            F  PI  G + N++   VK   + + IL + +  + ++RM  NV +   LP K   V+  
Sbjct: 686  FSVPITMGGYCNASPVQVKTAYKCACILRDTINPYLLRRMKANVKMSLSLPDKNEQVLFC 745

Query: 999  KLSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD-- 1053
            +L+  Q  +YKRF+D   ++   N  +         F+G  AL +I NHP I        
Sbjct: 746  RLTDEQHEVYKRFIDSKEVYQILNGEM-------QIFSGLTALRKICNHPDIFSGGPKIL 798

Query: 1054 KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE 1113
            KG P  E                           L  ++  GF+++              
Sbjct: 799  KGVPDEE---------------------------LNEEDHFGFWKR-------------- 817

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
               SGKM+++  +L +    G + L+F+QS   L +IE +L             ++   +
Sbjct: 818  ---SGKMIVVESLLKIWYKQGHRVLLFTQSRQMLHIIEAFLK------------QRSYSY 862

Query: 1174 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
             ++DG T  + RQ L+ RFNE  +  +   L++TR G LG+NL  A+RVII D  WNP+ 
Sbjct: 863  VKMDGTTTVASRQPLISRFNE--DTSIFIFLLTTRVGGLGVNLTGADRVIIYDPDWNPST 920

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEE 1293
            D QA  RAWR GQTK V  YRL+  GT+EEKIY RQ+ K+ L  R++   +  R     +
Sbjct: 921  DTQARERAWRIGQTKEVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILKDPKQRRFFKSND 980

Query: 1294 MLHLFEFGDDENPD 1307
            +  LF      NPD
Sbjct: 981  LYELFSLS---NPD 991


>gi|302916069|ref|XP_003051845.1| hypothetical protein NECHADRAFT_106058 [Nectria haematococca mpVI
            77-13-4]
 gi|256732784|gb|EEU46132.1| hypothetical protein NECHADRAFT_106058 [Nectria haematococca mpVI
            77-13-4]
          Length = 1919

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 203/644 (31%), Positives = 312/644 (48%), Gaps = 85/644 (13%)

Query: 658  RQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIP 717
            R+   + L+ Q + ++KL   + + G         V  D  +  I+N  +E+ +  + I 
Sbjct: 855  REREHQRLEEQEARRNKLRMDLKIHG---------VTSDDKSRIIINESKEEDQSLIYIN 905

Query: 718  SSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY--- 774
             +I  ++K HQ+ G+RF+W  I      V+  +   GC+LAHTMGLGKT QVI FL    
Sbjct: 906  EAIGPRIKEHQIDGVRFLWNQI------VRDPETRQGCLLAHTMGLGKTMQVITFLVALA 959

Query: 775  --------TAMRSVNLGLRTA--LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR 824
                    + +  +   LR    L++ P +++ NW  EF+ W P  L      +   +  
Sbjct: 960  DSSKSKDPSVVAQIPEDLRKGWTLVLCPPSLVDNWIDEFLIWAPKGLLGKLRKVTATLKG 1019

Query: 825  DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHM 884
            D R + +  W ++GGV +IGY  F+ L     V +          L D P I+V DEAH 
Sbjct: 1020 DDRYDTVEAWASEGGVLVIGYNMFKILLEIPGVSE---------LLVDKPSIVVTDEAHA 1070

Query: 885  IKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNP 944
            +KN    T  A  +     RIALTG+PL N+++EYY M+++V   FLG   EF+  +  P
Sbjct: 1071 LKNPETKTHIACSRFSTNARIALTGTPLHNSVLEYYAMINWVAPNFLGPLGEFKLIYSLP 1130

Query: 945  IENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQ 1004
            +E G   +S   + +    +   L + +   V R     +K  LPPK  FVI V    +Q
Sbjct: 1131 VEQGFDFDSGPIEKRRALTKLAALKKLVAPKVHRRTTAALKDSLPPKYEFVIYVPPGDVQ 1190

Query: 1005 RRLYKRFLD-LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL--QLTKDK-GYPSRE 1060
            ++LY  + + + G   D       +    +    L+ I  HP     ++T+ + G   RE
Sbjct: 1191 KKLYTLYQEGIGGQLGD------AKAGVLSAMNNLSLICRHPRCFAEKITRVREGDRLRE 1244

Query: 1061 DAEDSSSDENMDYNVVIGEKPRN-MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
                + + E++ +       PR  +   LQ               +L+     ++  S K
Sbjct: 1245 KGIPTKNPEDLAF-------PRQIIPQALQ---------------VLNVPDINDISLSRK 1282

Query: 1120 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
              LL  IL     +GDK LVFSQS+ +L+ +E  + K+           + +   RLDG 
Sbjct: 1283 TELLTVILDEARKVGDKVLVFSQSLDSLNYLE-AMCKM-----------QLRTISRLDGS 1330

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
            T    RQ+ ++RFNE      +  LIST AG +G+N+H ANRV+I D  WNPT + Q I 
Sbjct: 1331 TAVESRQEEIKRFNE---GSKEVYLISTTAGGVGLNIHGANRVVIFDIKWNPTVEQQGIG 1387

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            RA+R GQ KPVF Y L   GT E+ I+ + V K+ LAARVVD++
Sbjct: 1388 RAYRLGQKKPVFVYWLTTAGTFEQIIHNQHVFKQQLAARVVDKK 1431


>gi|167521471|ref|XP_001745074.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776688|gb|EDQ90307.1| predicted protein [Monosiga brevicollis MX1]
          Length = 827

 Score =  275 bits (703), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 194/643 (30%), Positives = 323/643 (50%), Gaps = 81/643 (12%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +S  L+ HQ  G+RF    +I+ +   KS  +G GCILA  MGLGKT Q I+ ++T ++ 
Sbjct: 204  LSTILRPHQREGVRF----VIECVAGCKSDLEGTGCILADDMGLGKTLQCISVVWTLLKQ 259

Query: 780  VNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRA 836
               G    + ALI+ P +++ NW+ EF KW   E   ++ F +   ++    +     +A
Sbjct: 260  GFDGKPLCQRALIICPGSLVKNWEAEFRKWLGVER--IKTFAISSANKLEHVQ-----QA 312

Query: 837  KG-GVFLIGYTAF-RNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
            K   V ++ Y  + R +   K V+                D+++CDEAH +KN  A TT+
Sbjct: 313  KAFPVVIVSYEMYLRCMDLLKQVRF---------------DVVICDEAHRLKNANAKTTR 357

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
             L  +  +RRIALTG+P+QN+L E++ +VDFV  G  GSS +F+  ++ PI   +  ++T
Sbjct: 358  ILSGLATRRRIALTGTPVQNDLQEFFTLVDFVNPGLFGSSAKFKRLYETPIVRARQHDAT 417

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
              +  +   R+  L   +  FV R    V    LPPKT +V+  + +PLQ +LY+R +  
Sbjct: 418  PAEKDLGEARAEELNRTIHEFVLRRTKEVNAAYLPPKTDYVVFCQPTPLQLQLYQRLIAT 477

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 1074
              F    ++  +          AL  + N P +L          R+ A  + S    D++
Sbjct: 478  Q-FVRSCMNAVRGGTRHLLVIAALRMLCNAPSLLA--------GRQSANVADS----DFD 524

Query: 1075 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMG 1134
             V+    +++   L G +D         ND+    T   L+ SGK+ L+  +L       
Sbjct: 525  RVL----KDVRRLLPGSDD---------NDVAARTTL--LEGSGKVALVRHMLRQWREKT 569

Query: 1135 D-KSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN 1193
            D ++L+ S S   LD+++                 +G  + RL G T + +R ++V RFN
Sbjct: 570  DERALLVSNSTRCLDILQLLCE------------AEGWPFLRLQGSTPTHQRLEMVNRFN 617

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
               +      L+S++AG +G+N+  A+R+++ D  WNP++DLQA+ R WR GQT+PVF Y
Sbjct: 618  ARHHDDF-VFLMSSKAGGVGLNIVGASRLVLFDTDWNPSHDLQAMARIWREGQTRPVFIY 676

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVS 1313
            RL+A GT+EEKIY+RQ+ K  L   V++ ++  +  S +++  LF+   D   + +  + 
Sbjct: 677  RLVATGTIEEKIYQRQIVKSALGTTVMEDKETEQAFSTKDLKELFQLHLDVASETVQLMR 736

Query: 1314 KENGQGSSQNTNCAL-KHKLP-------LSHEGCSDKLMESLL 1348
            K+  + SS   N  + +   P       L+ EG  + L   LL
Sbjct: 737  KKKDKISSSLVNWGVYQPPFPLDDLRDSLTFEGVPENLATCLL 779


>gi|325190695|emb|CCA25191.1| DNA repair and recombination protein RAD54 putative [Albugo laibachii
            Nc14]
          Length = 910

 Score =  275 bits (702), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 197/660 (29%), Positives = 318/660 (48%), Gaps = 88/660 (13%)

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E+ E  V +P  ++  L+ HQ  G++F+++     +  V++  +  GCILA  MGLGKT 
Sbjct: 148  EEKERRVVVPDILTKFLRPHQRDGVQFLFD----CVADVENAGR-FGCILADDMGLGKTL 202

Query: 768  QVIAFLYTAMRS-----VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF----- 817
            Q I  ++T + +         +   +IV P +++ NW  E  KW  + +K + +F     
Sbjct: 203  QSITLMHTLLETSMQDPTKPTIHRVIIVCPTSLVKNWNDEIQKWLQNRIKTIALFESNRE 262

Query: 818  -MLEDVSRDRRAELLAKWRAK---GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG 873
             +++++ R   +      R       V ++ Y  FR            M     H+    
Sbjct: 263  HVIKEIYRFIDSSCHPHHRTSPTSSKVLILSYETFR------------MHAAKFHSTPKC 310

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
             D+L+CDEAH +KN+ +   +AL  + C+RR+ L+G+P+QN+L E+Y MVDF     LG+
Sbjct: 311  CDLLICDEAHRLKNSHSQINRALAALACRRRVLLSGTPMQNDLEEFYAMVDFTNPDILGT 370

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
              +FR +F  PI  G+  ++T ++  +    S  L   +  F+ R    +  K LPPK +
Sbjct: 371  PAKFRKQFMGPILRGREPDATDKEQSLAQGCSWTLCNIVNQFILRRGNTLNAKHLPPKLM 430

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD 1053
             VI   LS LQ +LYKRFL+     N     ++   +      AL ++ NHP  L L KD
Sbjct: 431  QVICCPLSSLQEKLYKRFLESKAMRNIM---KQQNVNVLPSITALKKLCNHP--LLLFKD 485

Query: 1054 KG-----YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
             G      P  ED +           ++  E+    N+F  G+      QK   +     
Sbjct: 486  DGTALLKLPGFEDCQ----------QIIASEQ---KNNFTSGQRAFSTNQKQTCHP---- 528

Query: 1109 HTYKELDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
                   +SGK+ LL  ++ M      ++ +V S    TLDL+    S+   P       
Sbjct: 529  ------GWSGKLQLLDHLMQMMRKETKERIVVVSNYTQTLDLVSLLCSERNWP------- 575

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
                 + RLDG     +RQ++V+ FN+P        L+S++AG  G+NL  ANR+++ D 
Sbjct: 576  -----FVRLDGTISPKKRQQMVDVFNDPTTHSF-AFLLSSKAGGCGLNLIGANRLVLFDP 629

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
             WNP  D QA  R WR GQ +  + YR +A G++EEKI++RQ++KEGL + V D+ +V+ 
Sbjct: 630  DWNPATDKQAAARVWREGQKQMCYVYRFLATGSLEEKIFQRQLSKEGLQSIVDDKDEVNS 689

Query: 1288 TISKE--EMLHLFEFGDDENPDPLTAVS-----KENGQGSSQNTNCALKHKL---PLSHE 1337
              SK+  ++  L E  + +  D L         +EN   S ++ N  L   +   PLSHE
Sbjct: 690  LSSKDLKKLFVLQEATESDTHDRLRCTRCKWRLQENDIDSMRSPNAELNEAISETPLSHE 749


>gi|290982366|ref|XP_002673901.1| predicted protein [Naegleria gruberi]
 gi|284087488|gb|EFC41157.1| predicted protein [Naegleria gruberi]
          Length = 873

 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 191/599 (31%), Positives = 296/599 (49%), Gaps = 72/599 (12%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I + +   L+ HQV G++FM+E  +     V     G GC+LA  MGLGKT Q I  +
Sbjct: 240  VFIDNFLGENLRPHQVEGVKFMYECAMGLKDFV-----GKGCLLADEMGLGKTLQTITLI 294

Query: 774  YTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRVFMLEDVSRDRRAE 829
            YT +R    G   ++ A++VT  +++ NW  EF KW   + +K L V      ++   +E
Sbjct: 295  YTLLRRGPFGSPIIKKAIVVTNSSLVKNWTSEFDKWVGEDKIKVLTV--TTKTAKQSPSE 352

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNT 888
             L  ++A       GY     +S+       N+       LQD   DIL+CDE H +KN 
Sbjct: 353  TLKIFKA-------GYHQVLIISY-------NLCTNYVEELQDCQCDILICDEGHKLKNA 398

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
                 Q LK++   RRI L+G+PLQN+L E++ + DF+  G LG +  F+N F  PI+  
Sbjct: 399  NIKIFQTLKKISTPRRIVLSGTPLQNDLNEFFTICDFINPGLLGDATSFKNLFTEPIKKS 458

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            Q  N+  +D  I   RS  L + +  FV R    ++++ LPPK   V+   ++ LQ  LY
Sbjct: 459  QEPNAKKQDKVIGENRSKELNKIVSQFVLRRTNLLLRQHLPPKMEIVLFCGMTELQENLY 518

Query: 1009 KRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDS 1065
            K F+    L G  N  + +     +  A    L ++  HP ++       YP   + E  
Sbjct: 519  KHFVLSKALRGVINGTLDSN----NALACIMHLKKLLAHPNMI-------YPQENNEEKE 567

Query: 1066 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLD 1125
              D  +  ++    K    +D+               ND    H+     YSGK+++L +
Sbjct: 568  EEDNELFDDIWTQSKKHFPSDYNP-------------NDKKEYHS----QYSGKLLVLDN 610

Query: 1126 ILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK-KGKDWYRLDGRTESSE 1184
            +L     +GD+ ++ S     L+ IE             KL K +     RLDG T+S +
Sbjct: 611  LLREIREVGDRVVIVSNFKSILNEIE-------------KLCKIRDYPLSRLDGSTQSEK 657

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            R  +V  FN P +      L+S++AG  G+NL  ANR+I++D  WNP+ D QA+ R WR 
Sbjct: 658  RMVIVNSFNSPKSNDF-IFLLSSKAGGCGLNLIGANRLIMIDPDWNPSNDEQAMARVWRD 716

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            GQ K VF YR++  GT+EEKI++RQ+ K GL+   +D + +    S E +  LF++ +D
Sbjct: 717  GQKKSVFIYRMIGCGTIEEKIFQRQIVKTGLSKSTLDEKSLKSQFSSEMLKELFKYDND 775


>gi|270009357|gb|EFA05805.1| hypothetical protein TcasGA2_TC030720 [Tribolium castaneum]
          Length = 729

 Score =  274 bits (700), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 194/598 (32%), Positives = 298/598 (49%), Gaps = 84/598 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +  S+S  L+ HQ  G++FM++  +  ++   S     GCI+A  MGLGKT Q I  L
Sbjct: 106  VVVDPSLSNILRPHQREGVKFMYD-CVTGVQIPNS----FGCIMADEMGLGKTLQCITLL 160

Query: 774  YTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
            +T +R        +   +IV P +++ NW  E  KW    L  L    + D   D R +L
Sbjct: 161  WTLVRQGPECKPTIDKGIIVCPSSLVRNWSNEIDKWLKGRLSCL----IMDGGPDARKKL 216

Query: 831  LAKWRAKG----GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
                +  G     V +I Y  FR            M  EI H  + G  +++CDE H +K
Sbjct: 217  TQFMQGFGRTAIPVLIISYETFR------------MHAEILHKSEIG--LVLCDEGHRLK 262

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            N    T +AL  +K +RR+ L+G+P+QN+L+EY+ +V FV EG LGS+ EF+ +F+NPI 
Sbjct: 263  NCENQTYKALMGLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQEFKKKFENPIL 322

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
             GQ + +T  + +   +R   L + +   + R   N++ K LP K   ++  +L+PLQ++
Sbjct: 323  RGQDSTATDSERQKAVERLKELSDLVNRCLIRRTSNLLTKYLPVKFEMIVICQLTPLQKQ 382

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSF--FAGYQALAQIWNHPGILQLTKDKGYPSREDAED 1064
            +Y  +++  G     +++ +++ S    A    L ++ NHP ++    DK     E  E 
Sbjct: 383  IYLNYINSEGLRKGVLNDVEVKASLSALASITTLKKLCNHPDLIM---DKILEGGEGFEK 439

Query: 1065 SSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLL 1124
            S               P N ND            KD    L           SGK++LL 
Sbjct: 440  SRH-----------LLPPNYND------------KDVMPQL-----------SGKLMLLD 465

Query: 1125 DILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
              L  + +N  DK ++ S    TLDL E    KL R        K+G  + RLDG     
Sbjct: 466  CFLANLKNNYNDKVVLVSNYTQTLDLFE----KLCR--------KRGYRYVRLDGTMSIK 513

Query: 1184 ERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1243
            +R K+V  FN+P +      ++S++AG  G+NL  ANR+I+ D  WNP  D QA+ R WR
Sbjct: 514  KRAKVVANFNDPESGEF-IFMLSSKAGGCGLNLIGANRLIMFDPDWNPANDDQAMARVWR 572

Query: 1244 YGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEF 1300
             GQ KP + YR +A GT+EEKI++RQ  K+ L++ VVD  ++  R  S  E+  LF+ 
Sbjct: 573  DGQQKPCYIYRFLAAGTIEEKIFQRQAHKKALSSTVVDNNEETARHFSVAELRDLFKL 630


>gi|66811390|ref|XP_639875.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
 gi|60466825|gb|EAL64871.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
          Length = 989

 Score =  273 bits (699), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 195/631 (30%), Positives = 307/631 (48%), Gaps = 104/631 (16%)

Query: 708  EKGEEAVRI--PSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL-GCILAHTMGLG 764
            E+G + V +     I   L+ HQ  G++F+++ +  +     S D G  G ILA  MGLG
Sbjct: 261  EEGNKVVHVVLDPYIGRHLRPHQRRGVKFLYDCVTGN-----SNDNGYSGAILADQMGLG 315

Query: 765  KTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            KT Q +A L+T ++    G   ++ A+IVTP  +++NWK E  KW  +  + +   + + 
Sbjct: 316  KTLQTLALLWTLLKQSPYGKPTIKKAIIVTPSTLVNNWKSEIQKWFGNG-RLIASTLTDS 374

Query: 822  VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 881
            ++++ +A L     +   V +I Y   R   F K ++  +              ++VCDE
Sbjct: 375  LTKETKANLNDFNTSIKPVLIISYEQCR--IFSKELETMSCG------------LMVCDE 420

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
            AH +KN+ A TTQ++  V+C R+I LTG+P+QNNL+E+Y M+DF     LGS  +F+  F
Sbjct: 421  AHRLKNSNAKTTQSIMSVRCDRKILLTGTPIQNNLVEFYSMMDFANPNCLGSLADFKKSF 480

Query: 942  QNPIENGQ---HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITV 998
              PI   +   ++ STSE ++    +S  L + +K F+ R   N+++K LPPK V +I  
Sbjct: 481  IIPINKSRESPNSTSTSEGIR----KSIQLSKLVKPFIIRRKSNILEKYLPPKRVQIIFC 536

Query: 999  KLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPS 1058
            KLS LQ  LYK  L           N    KS  +G  +     +   I  L K    PS
Sbjct: 537  KLSSLQIELYKSIL-----------NSNSVKSLLSGGGSRGSATSLSTITLLKKLCNSPS 585

Query: 1059 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW-WNDLLHEHTYKELDY- 1116
                                         L  K D+G  Q+     ++L +H Y   +Y 
Sbjct: 586  LL--------------------------LLNNKQDEGGEQQQTEIQNILKKHNYTLENYQ 619

Query: 1117 ---------SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
                     SGK++ +  ++     M +K ++ S    TLD+ E    +L          
Sbjct: 620  EIQEQQDNESGKLLFVESLIKQLKPMNEKLVLVSNFTKTLDVFERLCKRL---------- 669

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNK---------RVKCTLISTRAGSLGINLHS 1218
                D  RLDG  ++  RQ LV++FN              + +  L+S +AG +GINL  
Sbjct: 670  --SIDTLRLDGDVKADSRQALVDKFNSSTQNVSSSKSSSSQYQVFLLSAKAGGVGINLIG 727

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
             N +++ D  WNP  D+QA+ R WR GQTKPVF YRL + GT+EEKIY+RQ+ KE ++  
Sbjct: 728  GNHLVLYDPDWNPAIDIQAMERIWREGQTKPVFIYRLFSTGTIEEKIYQRQLMKESISNS 787

Query: 1279 VVDRQQVHR--TISKEEMLHLFEFGDDENPD 1307
            +VD++        S E++  +F + ++ N D
Sbjct: 788  IVDKKFNDNGGNFSLEDLKDIFSYNENTNSD 818


>gi|189238349|ref|XP_967988.2| PREDICTED: similar to steroid receptor-interacting snf2 domain
            protein [Tribolium castaneum]
          Length = 713

 Score =  273 bits (699), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 194/598 (32%), Positives = 298/598 (49%), Gaps = 84/598 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +  S+S  L+ HQ  G++FM++  +  ++   S     GCI+A  MGLGKT Q I  L
Sbjct: 90   VVVDPSLSNILRPHQREGVKFMYD-CVTGVQIPNS----FGCIMADEMGLGKTLQCITLL 144

Query: 774  YTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
            +T +R        +   +IV P +++ NW  E  KW    L  L    + D   D R +L
Sbjct: 145  WTLVRQGPECKPTIDKGIIVCPSSLVRNWSNEIDKWLKGRLSCL----IMDGGPDARKKL 200

Query: 831  LAKWRAKG----GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
                +  G     V +I Y  FR            M  EI H  + G  +++CDE H +K
Sbjct: 201  TQFMQGFGRTAIPVLIISYETFR------------MHAEILHKSEIG--LVLCDEGHRLK 246

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            N    T +AL  +K +RR+ L+G+P+QN+L+EY+ +V FV EG LGS+ EF+ +F+NPI 
Sbjct: 247  NCENQTYKALMGLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQEFKKKFENPIL 306

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
             GQ + +T  + +   +R   L + +   + R   N++ K LP K   ++  +L+PLQ++
Sbjct: 307  RGQDSTATDSERQKAVERLKELSDLVNRCLIRRTSNLLTKYLPVKFEMIVICQLTPLQKQ 366

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSF--FAGYQALAQIWNHPGILQLTKDKGYPSREDAED 1064
            +Y  +++  G     +++ +++ S    A    L ++ NHP ++    DK     E  E 
Sbjct: 367  IYLNYINSEGLRKGVLNDVEVKASLSALASITTLKKLCNHPDLIM---DKILEGGEGFEK 423

Query: 1065 SSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLL 1124
            S               P N ND            KD    L           SGK++LL 
Sbjct: 424  SRH-----------LLPPNYND------------KDVMPQL-----------SGKLMLLD 449

Query: 1125 DILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
              L  + +N  DK ++ S    TLDL E    KL R        K+G  + RLDG     
Sbjct: 450  CFLANLKNNYNDKVVLVSNYTQTLDLFE----KLCR--------KRGYRYVRLDGTMSIK 497

Query: 1184 ERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1243
            +R K+V  FN+P +      ++S++AG  G+NL  ANR+I+ D  WNP  D QA+ R WR
Sbjct: 498  KRAKVVANFNDPESGEF-IFMLSSKAGGCGLNLIGANRLIMFDPDWNPANDDQAMARVWR 556

Query: 1244 YGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEF 1300
             GQ KP + YR +A GT+EEKI++RQ  K+ L++ VVD  ++  R  S  E+  LF+ 
Sbjct: 557  DGQQKPCYIYRFLAAGTIEEKIFQRQAHKKALSSTVVDNNEETARHFSVAELRDLFKL 614


>gi|260815483|ref|XP_002602502.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae]
 gi|229287813|gb|EEN58514.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae]
          Length = 700

 Score =  273 bits (699), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 195/603 (32%), Positives = 302/603 (50%), Gaps = 97/603 (16%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDK---GLGCILAHTMGLGKTFQVIAFLYTAMRS- 779
            L+ HQ  G++FMW+ +        +G++     GCI+A  MGLGKT Q I  L+T ++  
Sbjct: 106  LRPHQREGVKFMWDCV--------TGERIPGSQGCIMADEMGLGKTLQCITLLWTLLKQS 157

Query: 780  --VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAK 837
                  +  A++VTP +++ NW  E  KW  + +  L +   +  S+D+    L  + ++
Sbjct: 158  PDAKPTIDKAIVVTPSSLVKNWYNEINKWLGTRVNALAI---DSGSKDQIDRNLDSFMSQ 214

Query: 838  GG------VFLIGYTAFRNLSFGKHVKDRNMAREICHA--LQDGP-DILVCDEAHMIKNT 888
             G      + +I Y  FR                  HA  L  GP  +++CDE H +KN 
Sbjct: 215  QGRRVSSPILIISYETFR-----------------LHAAVLHRGPIGLVICDEGHRLKNC 257

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               T QAL  +KC+RR+ L+G+P+QN+L+EY+ +V FV  G LG++ EF+ RF+ PI  G
Sbjct: 258  ENLTYQALSGLKCRRRVLLSGTPIQNDLLEYFSLVHFVNTGILGTAQEFKKRFETPILRG 317

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ +D K   ++   L + +   + R   +++ K LP K   V+  +L+PLQ  LY
Sbjct: 318  RDASASDKDQKRGEEKLKELLDIVDRCIIRRTASILSKYLPVKIEQVVCCRLTPLQTALY 377

Query: 1009 KRFLD--LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS 1066
            K  +   L     D+  + K+  S F     L ++ NHP +                   
Sbjct: 378  KHMVQSKLVQAQLDKSKSGKVTGSAFTAITQLKKLCNHPSL------------------- 418

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
                      I EK    ++ L G  D   F + +      +H   EL  SGKM++L  I
Sbjct: 419  ----------IYEKCLEGDEGLDGALD--LFPEKYSP----KHIQPEL--SGKMLVLDYI 460

Query: 1127 LTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSER 1185
            L M  S   DK ++ S    TLDL E    KL R         +G  + RLDG     +R
Sbjct: 461  LAMTKSKTSDKVVLVSNYTQTLDLFE----KLCR--------SRGYLYVRLDGSMTIKKR 508

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
             K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR G
Sbjct: 509  AKVVERFNNPSSPEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDG 567

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGDDE 1304
            Q K  + YRL+A GT+EEKI++RQ  K+ L++ VVD+++ V R  S +E+  LF   +D 
Sbjct: 568  QKKQCYIYRLLATGTIEEKIFQRQAHKKALSSCVVDQEEDVDRHFSLDELRDLFPLNEDT 627

Query: 1305 NPD 1307
              D
Sbjct: 628  ISD 630


>gi|327300655|ref|XP_003235020.1| hypothetical protein TERG_04072 [Trichophyton rubrum CBS 118892]
 gi|326462372|gb|EGD87825.1| hypothetical protein TERG_04072 [Trichophyton rubrum CBS 118892]
          Length = 1877

 Score =  273 bits (699), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 198/620 (31%), Positives = 317/620 (51%), Gaps = 89/620 (14%)

Query: 723  KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 782
            ++K HQ+ GI+FMW  +I+        +K  GC+LAHTMGLGKT QVI+ L T   + N 
Sbjct: 890  RIKEHQLSGIQFMWRELIKD-------EKNEGCLLAHTMGLGKTMQVISLLVTIAIASNS 942

Query: 783  G-----------LRTA--LIVTPVNVLHNWKQEFMKWRPSELKPLRVF--MLEDVSRD-- 825
                         RT+  LI  P +++ NW++EF KW P +         + + VS+D  
Sbjct: 943  SNPKIKEQIPERFRTSRTLITCPASLIDNWEEEFAKWTPPDAATRYNLGQVRKAVSQDPI 1002

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD--RNMAREICHALQ----DGPDILVC 879
            +R   +  W  +GGV LI +   R +      K   + ++ E C  ++    DGP+I+V 
Sbjct: 1003 QRLHNINAWYTEGGVLLISHELLRRMILYNPQKTGLQKLSTEQCEIIKRQLLDGPNIVVA 1062

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DEAH +KN  ++ ++A    K + RIALTGSPL N L++YY MV+++   +LG+  +F+ 
Sbjct: 1063 DEAHKMKNGASNLSKACSMFKSKSRIALTGSPLSNQLIDYYQMVNWISPNYLGTLKQFKA 1122

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
            +++ PI  G + +ST+ +     ++  +L + L+  V R  ++V++KDLP K  FVI + 
Sbjct: 1123 KYEEPIREGLYYDSTNAEYVKSRKKLEVLKKVLEPKVNRAGISVLQKDLPSKFEFVIYIP 1182

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-----ILQLTKDK 1054
             +PLQ+  Y +F+ L      +   E  R      Y  L  + +HP      IL+  K++
Sbjct: 1183 PTPLQKETYNQFVALT--MEGKGEFEFTRLWVLLSY--LTLLCHHPSCFLRRILEKKKER 1238

Query: 1055 -----------GYPSREDAEDSSSDENM-DYNVVIGEKPRNMNDFLQGKNDDG------- 1095
                       G P      +S  + N+ D +++I  +    +D L+ +           
Sbjct: 1239 SQLIEREKAIEGGPGVIVPSESEPEANIDDSSILITVE----DDVLEIEGQTAITDEVVS 1294

Query: 1096 -FFQKDWWNDLLHEHTYKELDY---SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIE 1151
             F QK  + D+      K+LD    S +  ++  I+      GDK L+FS  + TL    
Sbjct: 1295 QFEQK--FKDI------KDLDSPKNSHRTQMVGQIVDESIKAGDKILIFSGYLHTLS--- 1343

Query: 1152 FYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGS 1211
             YL  +        L  +G  + RLDG+T  + RQ     F    +      LIST+AG+
Sbjct: 1344 -YLGSM--------LDARGHKYCRLDGKTPIATRQAATRDFR---DSDAHVYLISTKAGA 1391

Query: 1212 LGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVT 1271
            LG+N+  ANRVII +  +NPT++ QAI RA+R GQTK VF YR +  GT EE I+++ + 
Sbjct: 1392 LGLNIIGANRVIIFESEYNPTWEEQAIGRAYRLGQTKDVFVYRFVMGGTFEELIHEKGIF 1451

Query: 1272 KEGLAARVVDRQQVHRTISK 1291
            K+ +A R +D++   R+  K
Sbjct: 1452 KKNMALRAIDKKNPTRSTGK 1471


>gi|119619018|gb|EAW98612.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
            homolog, S. cerevisiae), isoform CRA_b [Homo sapiens]
          Length = 1826

 Score =  273 bits (698), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 132/284 (46%), Positives = 187/284 (65%), Gaps = 5/284 (1%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
             T  +++   E  E  V++  ++  KLK HQV G++FMW+   +S++K K    G GCIL
Sbjct: 1534 TTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCIL 1592

Query: 758  AHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLR 815
            AH MGLGKT QV++FL+T +    L   TAL+V P+N   NW  EF KW+    + + L 
Sbjct: 1593 AHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLE 1652

Query: 816  VFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-G 873
            V  L  V R + R+ +L +W+  GGV +IGY  +RNL+ G++VK R +      AL D G
Sbjct: 1653 VSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPG 1712

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
            PD +VCDE H++KN  +  ++A+  ++ +RRI LTG+PLQNNL+EY+CMV+F++E  LGS
Sbjct: 1713 PDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGS 1772

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQ 977
              EFRNRF NPI+NGQ  +ST  DV++M +R+HILYE L G VQ
Sbjct: 1773 IKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQ 1816



 Score = 60.1 bits (144), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 493 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 547
           CTAC           ++ HP L V++CK+C          +D+D  +  C WC    +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230

Query: 548 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 589
            C  C   FC  C+ RN+    LS  + + + W C  C P  L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273


>gi|260943410|ref|XP_002616003.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720]
 gi|238849652|gb|EEQ39116.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720]
          Length = 879

 Score =  273 bits (697), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 202/630 (32%), Positives = 305/630 (48%), Gaps = 101/630 (16%)

Query: 713  AVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAHTMGLGK 765
            + R+P  I  KL    + HQV G+RF++        +  SG    +  GCI+A  MGLGK
Sbjct: 278  STRVPVVIDPKLARVLRPHQVAGVRFLY--------RCTSGLVDARAKGCIMADEMGLGK 329

Query: 766  TFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLED 821
            T Q +A ++T +R    G RT    +IV P +++ NW  E  KW  P  L PL V     
Sbjct: 330  TLQCLALMWTLLRQGPSGRRTIDKCIIVCPSSLVRNWANEMDKWLGPGALTPLAVDGKST 389

Query: 822  VSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPD 875
             S D   + L +W    G      V +I Y   R  +      D+    E+         
Sbjct: 390  KSADL-GQALQQWCTASGRNIVRPVLIISYETLRRNA------DKLAGTEV--------G 434

Query: 876  ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
            +++ DE H +KN  + T  AL  ++C+RR+ L+G+P+QN+L EY+ ++ F   G+LG+ +
Sbjct: 435  LMLADEGHRLKNGDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLTFANPGYLGTRN 494

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFV 995
            EFR  ++N I  G+  ++T ++VK   Q+   L + +  F+ R   +++ K LP K  +V
Sbjct: 495  EFRRNYENTILRGRDADATDDEVKKGEQKLAELSQAVSKFIIRRTNDILSKYLPVKYEYV 554

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            + V LSP QR LY+ F+     ++D  S++ I          L ++  HP +L L  D  
Sbjct: 555  VFVGLSPFQRALYEHFIS----SDD--SSKLIASQPLKAIDMLKKLCTHPDLLSLPDDIQ 608

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
               +   +D  S E        G + R +              + W              
Sbjct: 609  GSRKLIPDDYQSSE-------AGGRGREI--------------QTW-------------- 633

Query: 1116 YSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
            +S K  +L   L  + +   DK +V S    TLDLIE    K+ R  + G L        
Sbjct: 634  FSAKFSILERFLHQIRTQTNDKIVVISNYTRTLDLIE----KMCRYKRYGSL-------- 681

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG    ++RQK+V+RFN+P        L+S++AG  GINL  ANR++++D  WNP  D
Sbjct: 682  RLDGTMTINKRQKIVDRFNDPEGNEF-IFLLSSKAGGCGINLIGANRLVLMDPDWNPAAD 740

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEE 1293
             QA+ R WR GQ K  F YR M  GT+EEKI++RQ  K  L++ VVD ++ V R  S + 
Sbjct: 741  QQALARVWRDGQKKDCFIYRFMCTGTIEEKIFQRQSMKLSLSSCVVDAKEDVERIFSGDA 800

Query: 1294 MLHLFEFGDDENPDP-----LTAVSKENGQ 1318
            +  LF++  D   D          SKE GQ
Sbjct: 801  LRLLFQYRPDTTCDTHDTYNCKRCSKEKGQ 830


>gi|313218174|emb|CBY41469.1| unnamed protein product [Oikopleura dioica]
          Length = 407

 Score =  272 bits (696), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 146/361 (40%), Positives = 213/361 (59%), Gaps = 21/361 (5%)

Query: 704  NVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGL 763
            NV   + E++V + S +  K+KAHQ+ GIRFM++N I+S+++ +S   G GC+LAH MGL
Sbjct: 1    NVNHPQDEDSVFLASQLQGKIKAHQIGGIRFMYDNTIESLKRCRS-SAGFGCVLAHAMGL 59

Query: 764  GKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW---RPSELKPLRVFMLE 820
            GKT QVI+F    +R  + G +  +I+ PVN + NWK EF  W   RP+   P       
Sbjct: 60   GKTLQVISFTDVILR--HTGHKYVMIIVPVNTIQNWKAEFATWLPERPATSPPDPKVSYR 117

Query: 821  DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN--------MAREIC--HAL 870
              S D R  L+  WR+ GG  ++GY  FR L   K +K  +        M  + C  + L
Sbjct: 118  CNSIDARLALIKGWRSTGGSLIVGYETFRILVTPKKLKKNSTVPDQHHLMMLQECQKYLL 177

Query: 871  QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
              G D+++CDE H IKN +A+ ++AL +++ +RR+ LTG+PLQNNL+EY+ MVDFVR   
Sbjct: 178  DPGADLVICDEGHRIKNEKAELSKALSKIRTKRRVILTGTPLQNNLIEYWTMVDFVRPRL 237

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 990
            LGS +EF+N F  PI NGQ  N+T +D + M  RSH+L+E LKG VQR    V+  DLP 
Sbjct: 238  LGSKNEFQNMFVAPITNGQSKNATQDDRRQMKYRSHVLHELLKGCVQRRSHMVLCDDLPA 297

Query: 991  KTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQL 1050
            K  +++ V+LS  Q   Y++F  L    ++  S   +       +   ++IWNHP +L  
Sbjct: 298  KNEYILMVRLSQQQIPYYQKFTQLKNEESEEGSMNAV-----VAHATCSKIWNHPDLLYR 352

Query: 1051 T 1051
            T
Sbjct: 353  T 353


>gi|388582651|gb|EIM22955.1| hypothetical protein WALSEDRAFT_67840 [Wallemia sebi CBS 633.66]
          Length = 916

 Score =  272 bits (695), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 198/623 (31%), Positives = 315/623 (50%), Gaps = 93/623 (14%)

Query: 698  ITGYIVNVVREKGEEAVRI--PSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            I+ Y+ N +  K    V +     IS+KL+ HQ  G++FM+E ++  +R    G KG GC
Sbjct: 194  ISTYVANKLNPKQFPLVDVVLDPHISSKLRPHQREGVKFMYEAVM-GMR----GHKGNGC 248

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRS---VNLG--LRTALIVTPVNVLHNWKQEFMKWRPSE 810
            ILA  MGLGKT QVIA ++T ++     N G  +  A+IV PV++++NWK+EF KW    
Sbjct: 249  ILADEMGLGKTLQVIALIWTLLKQNPVTNSGPVIGKAMIVCPVSLVNNWKKEFSKWIGQS 308

Query: 811  LKPLRVFMLEDVSRDRRAELLAKWRAK--GGVFLIGYTAFRNLSFGKHVKDRNMAREICH 868
               + +F+      D+    + K++      V +IGY   R             A E+  
Sbjct: 309  --KIGIFV-----GDKDVTEIKKFQQSRIHQVLIIGYEKLRT------------AAEVLK 349

Query: 869  ALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
              Q    ++VCDE H +K++   T+Q  +    +RRI L+G+P+QN+L EYYCM +F   
Sbjct: 350  FCQPQIGLIVCDEGHRLKSSNK-TSQVFEAFPTRRRIILSGTPIQNDLGEYYCMTEFCNP 408

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
            G L +   F+ +++ PI   +  N +  D++I  QRS  L      FV R   +++   L
Sbjct: 409  GLLDTYASFKKKYETPIMRSRAPNCSKGDLEIGRQRSEGLSALNDQFVLRRTADILVNVL 468

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTN--DRVSNEKIRKSFFAGYQALAQIWNHPG 1046
            PPKT FV+ +  + LQ RLY++ +         D++S + +     A    L  + N PG
Sbjct: 469  PPKTEFVVFIAPTKLQLRLYQQLVQTSIVQKVLDKLSGQHL-----ALIGILRNLCNSPG 523

Query: 1047 IL-QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDL 1105
            IL  + ++    + ++ +  S  E    NV       N NDF                  
Sbjct: 524  ILYNIMQNNSTDTHKEFKFDSCKELFPVNV-------NPNDF------------------ 558

Query: 1106 LHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQG 1164
                     + SGK+  L  +L T+ +   +K +V S    TL+LIE +     R  K  
Sbjct: 559  ---------NLSGKLKALGRLLKTLKNQTEEKVIVVSNFTTTLNLIETHC----RVNKY- 604

Query: 1165 KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
                    + RLDG T+ ++RQ++V+ FN          L+ST++G +G+NL  A+R+I+
Sbjct: 605  -------KFCRLDGSTQQAKRQEIVDSFNRSPQAGKFIFLLSTKSGGVGLNLIGASRLIL 657

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA----ARVV 1280
             +  WNP+ DLQA+ R  R GQT+PVF YR +  GT++EKI++RQ+TK GL+       V
Sbjct: 658  FESDWNPSNDLQAMARIHRDGQTRPVFIYRFLTTGTIDEKIFQRQLTKIGLSNSLMGNTV 717

Query: 1281 DRQQVHRTISKEEMLHLFEFGDD 1303
            +++    + + EE+  LF+  DD
Sbjct: 718  EKKNETDSFTIEELRALFKVDDD 740


>gi|449532984|ref|XP_004173457.1| PREDICTED: transcriptional regulator ATRX-like, partial [Cucumis
            sativus]
          Length = 230

 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 135/167 (80%), Positives = 146/167 (87%), Gaps = 8/167 (4%)

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 979
            + MVDFVREGFLGSSHEFRNRFQNPIENGQHTNST +DVKIMNQRSHILYEQLKGFVQRM
Sbjct: 17   HGMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLDDVKIMNQRSHILYEQLKGFVQRM 76

Query: 980  DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRK-SFFAGYQAL 1038
            DM VVKKDLPPKTVFVI+VKLSPLQR+LYKRFLD+HGF N + S+E++RK SFFAGYQAL
Sbjct: 77   DMTVVKKDLPPKTVFVISVKLSPLQRKLYKRFLDVHGFNNGKDSSEQLRKRSFFAGYQAL 136

Query: 1039 AQIWNHPGILQLTK-DKGYPSRED------AEDSSSDENMDYNVVIG 1078
            AQIWNHPGILQLTK DK Y  RED      A DSSSDEN+D N+  G
Sbjct: 137  AQIWNHPGILQLTKEDKYYVKREDAIENFLAGDSSSDENIDSNIGTG 183


>gi|344274673|ref|XP_003409139.1| PREDICTED: DNA excision repair protein ERCC-6 [Loxodonta africana]
          Length = 1501

 Score =  271 bits (694), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 220/760 (28%), Positives = 341/760 (44%), Gaps = 151/760 (19%)

Query: 610  SESDSENSDADNNLK--IGGKRKQKKKIRRILDD---AELGEETK-----RKIA------ 653
            +E++     AD  LK  + G+++QKK   R LD+      GEET+     RK A      
Sbjct: 401  AEANLPEGGADYELKPLLKGRKRQKKATVRELDEDFIPSSGEETEAGGAGRKAARWRDDG 460

Query: 654  ---IEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKG 710
                 ++R  R   L++Q   K   +   + D D                          
Sbjct: 461  NEDYYQQRLRRWNKLRLQDKEKCLTLEDSSEDSDAEF----------------------- 497

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 498  DEGFKVPGFLFRKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 547

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L D
Sbjct: 548  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHD 603

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                  ++ +L+       G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 604  TGSYTHKKEKLIRDIARYHGILITSYSYIR-------LMQDDISRHDWH-------YVIL 649

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DFV  G LG+   F  
Sbjct: 650  DEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFME 709

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 710  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 769

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q  +Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 770  CRLTDEQHEVYQNFIDSKEVY--RILNGEMQ--IFSGLVALRKICNHPDLF--------- 816

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   PR++     G++++  F   +W              S
Sbjct: 817  --------------------SGGPRHLTGLPDGESEEDQF--GYWK------------RS 842

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 843  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------ARKYSYLKMD 890

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G +G+NL  ANRVII D  WNP+ D QA
Sbjct: 891  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQA 948

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 949  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1008

Query: 1298 FEFGDDENPDPLTAVSKE---NGQGSS-QNTNCALKHKLP 1333
            F      +PDP  +        G GS  Q     LK K+P
Sbjct: 1009 FTL---TSPDPSQSTETSAIFAGTGSDVQTPKRHLKRKMP 1045


>gi|178056748|ref|NP_001116655.1| DNA repair and recombination protein RAD54-like [Sus scrofa]
 gi|168084900|dbj|BAG09488.1| DNA repair protein RAD54 [Sus scrofa]
          Length = 747

 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 194/607 (31%), Positives = 300/607 (49%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G+RF+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPVLSKVLRPHQREGVRFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALNSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+ RF+ PI  G+   ++ ED ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKRFELPILKGRDAAASEEDRRLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPAEELREGKMSVSSLSSITSLKKLCNHPALI-------- 463

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D   G  D  FF   + +  L      E   
Sbjct: 464  ----------------YDKCVEEE-----DGFAGALD--FFPPGYSSKAL------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 661  LKELFTL 667


>gi|340058746|emb|CCC53107.1| putative helicase-like protein , fragment, partial [Trypanosoma vivax
            Y486]
          Length = 864

 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 197/620 (31%), Positives = 310/620 (50%), Gaps = 47/620 (7%)

Query: 723  KLKAHQVVGIRFMWENIIQS-IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR--- 778
            KL+ HQ+ GIRF+W  +++  + +V +    +GC+LAHTMGLGKT Q + FL+  +    
Sbjct: 242  KLRPHQLNGIRFIWSILVEGPVGRVPA----VGCVLAHTMGLGKTSQAVIFLHLFLEEQK 297

Query: 779  --------SVNLGLRTALIVTPVNVLHNWKQEFMKWR---PSELKPLRVFMLEDVSRDRR 827
                      + G+R  L+V P  V  +W+ EF  W    P+E + + V + E     +R
Sbjct: 298  KQRHRLSNGFSHGVRV-LVVVPKTVRQSWRSEFTLWSQYFPAEQRIIPVCIEERSPPKKR 356

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
             EL  +WR +GGV LIGY     L   K + +R        +  D  ++L+CDEAH +K+
Sbjct: 357  RELFEQWRRRGGVLLIGYEML--LGICKSLPERQENGSGAKS-TDFIELLICDEAHRLKS 413

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
             +   T  L  +   RR+ LTG+PLQN L EY+ M D     +    H FR  F NPIE 
Sbjct: 414  PKLQITSVLCILHPLRRLLLTGTPLQNCLNEYWVMSDIALHKYF-ERHRFREFFINPIEA 472

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
                N+T ++V+    ++  L ++LK FVQR+D   +K +LPP   +V+ + LS LQ  L
Sbjct: 473  SVDGNATKQEVETARAKTFTLIKELKNFVQRVDSTPLKDELPPLHDYVLVLPLSALQTDL 532

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            Y +FL +       +  +    SF        +I +HP  L  T +  + S  D    S 
Sbjct: 533  YNKFLQI-------MREDGNIFSFIQIVTYTNRISSHPQ-LMYTANFSFSSARDLHGDSK 584

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
            +  +  +    EK       + G    G    +  + L     Y      G  + +  ++
Sbjct: 585  NNGVVSSGDEMEKGEAGAAGICGSVASG----NPLSRLEAPLGYVPAPEDGTKLYVAALI 640

Query: 1128 TMCSNM-GDKSLVFSQSIPTLDLIEFYLSKL-PRPGKQGKLWKKGKDWYRLDGRTESSER 1185
               + + G+K+L FS S   LDL E  +S L  R    G + +  + + RLDG    + R
Sbjct: 641  IKAAMLRGEKTLFFSASTKLLDLFEVIISTLNKRWTLDGSICRDIR-FCRLDGSHSEAAR 699

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
            +  +  FN          L+S +AG +GI + +A RVII D  +NP YD QAI RA+RYG
Sbjct: 700  EDALRNFNS-----ADVFLLSIKAGGVGITITAATRVIIADMGFNPAYDKQAIGRAYRYG 754

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR-TISKEEMLHLFEFGDD- 1303
            QTKPVF YRL+ + T+E ++++++++KE L   VV+   + R  +S   M    EF ++ 
Sbjct: 755  QTKPVFVYRLVCYQTLEHRLFEQKLSKEWLGLTVVEEASLKRDGLSGLHMHSPLEFLNNF 814

Query: 1304 -ENPDPLTAVSKENGQGSSQ 1322
             E P+    V+++  Q + +
Sbjct: 815  QELPNGFHVVTEDQRQSTER 834


>gi|324502629|gb|ADY41155.1| DNA excision repair protein ERCC-6, partial [Ascaris suum]
          Length = 1156

 Score =  271 bits (693), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 190/610 (31%), Positives = 293/610 (48%), Gaps = 109/610 (17%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
             +R+P+    KL  +Q  G+R++ E   Q +          G ILA  MGLGKT QVI F
Sbjct: 254  GLRVPNVCWNKLFKYQKTGVRWLSELHEQCV----------GGILADEMGLGKTIQVICF 303

Query: 773  L----YTAMRSVNLGLR---TALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
            L    ++   +   G R     L++ P  ++H W +EF  W P  L  + V       R 
Sbjct: 304  LRALAFSQAETRGFGFRGLGPVLLICPTTLMHQWLKEFHNWFP--LCRIAVLHSSGCFRG 361

Query: 826  RRAELLAK---WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
             ++ LL+K   +R  G   L  Y+ F         K + +A    H        ++ DE 
Sbjct: 362  PQSHLLSKFSTYRKDGCTLLTSYSTFTK-------KRKALANANWH-------YVILDEG 407

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H I+N  A  T+A+K+V+   R+ LTGSPLQN+L E + ++DFV  G LG+   F  +F 
Sbjct: 408  HKIRNPGAQMTRAVKEVRTPHRLILTGSPLQNSLKELWSLMDFVYPGRLGALQTFTEKFA 467

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNV-VKKDLPPKTVFVITVKL 1000
             PI  G + N+++  V+   + + +L + +  ++ +RM  +V +   LP KT  V+   +
Sbjct: 468  IPITQGGYANASAIQVRTAYKCACVLRDAINPYILRRMKKDVEMTVQLPSKTEQVLFCNI 527

Query: 1001 SPLQRRLYKRFLDLHGFTNDRVSNEKIR-----KSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +P QR  YK ++          S E  R        F G   L ++ NHP ++      G
Sbjct: 528  TPCQRTFYKDYIS---------SRECARILAGGMDAFVGLITLRKLCNHPDLVT-----G 573

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
             P++ +  + + DE MD+    G   R                                 
Sbjct: 574  GPNKHNEYNVTLDEEMDF----GAASR--------------------------------- 596

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM++L  +L +  +   K L+FSQS   L L+E +            + K+G ++ R
Sbjct: 597  -SGKMIVLKALLKLWKDQNQKVLLFSQSRQMLTLLEKF------------VIKEGYEYLR 643

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T    RQ LVE+FN   N+ +   L++T+ G LG+NL  ANRV+I D  WNP+ D+
Sbjct: 644  MDGSTPIGSRQPLVEKFN--TNEDIFLFLLTTKVGGLGVNLTGANRVVIFDPDWNPSTDV 701

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ + V  YRL+  GT+EEKIY+RQ+ K+ LA RV+   +  R     ++ 
Sbjct: 702  QARERAWRIGQERAVTVYRLLTSGTIEEKIYQRQIFKQFLANRVLVDPKQRRFFKTNDLH 761

Query: 1296 HLFEFGDDEN 1305
             LF  GD++ 
Sbjct: 762  ELFTLGDEKT 771


>gi|449675767|ref|XP_002170465.2| PREDICTED: DNA repair and recombination protein RAD54-like, partial
            [Hydra magnipapillata]
          Length = 716

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 193/611 (31%), Positives = 310/611 (50%), Gaps = 86/611 (14%)

Query: 704  NVVREKGEEA---VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHT 760
            N +  K EE    V +   +++ L+ HQ  G++F+++ ++ +  ++K      GCI+A  
Sbjct: 101  NKLTSKSEENLVHVVVDPQLTSVLRPHQREGVKFLYDCVVGN--RIKDN---FGCIMADE 155

Query: 761  MGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF 817
            MGLGKT Q I  L+T +R    G   +  A+IV P +++ NW +E  KW    +  L + 
Sbjct: 156  MGLGKTLQCITVLWTLLRQSPSGKPEINKAIIVAPASLVKNWDKEIEKWLKGRVHTLAI- 214

Query: 818  MLEDVSR----DRRAELLAKW--RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
              +  S+    D+ +  +++   RA   + +I Y  FR            +  ++ H   
Sbjct: 215  --DSGSKSEIDDKLSSFMSQQQVRAPTPILIISYETFR------------LHTDVLHRSP 260

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             G  +++CDE H +KN    T QAL  +K ++RI L+G+P+QN+L+EY+ +V FV  G L
Sbjct: 261  VG--LVICDEGHRLKNLENQTYQALNLLKTKKRILLSGTPIQNDLLEYFSLVHFVNGGML 318

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            G+  EFR +F+ PI  G+    +  D KI  ++   L   +   + R    ++ K LP K
Sbjct: 319  GTVSEFRRKFEAPILRGRDGAGSESDQKIGEEKLAELLSIVSKCIIRRTSAILSKYLPVK 378

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
            T  ++  KL+ LQ +LYK F++         ++ K+  S  A    + ++ NHP ++   
Sbjct: 379  TEQIVMCKLTTLQSKLYKAFVNSKVARMQLQADAKLNASSLAFINLIKKLCNHPELI--- 435

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                Y  ++  ED+  +       V+ E P N N             K + +DL      
Sbjct: 436  ----YDKQKLCEDNLQE-------VLNEFPPNFN------------TKVFASDL------ 466

Query: 1112 KELDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
                 SGKM +L  IL +  S   DK ++ S    T+DL E  LS+L           +G
Sbjct: 467  -----SGKMQVLDFILALVKSTSNDKVVLVSNYTQTIDLFE-KLSRL-----------RG 509

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
              + RLDG     +R K+V+RFN+P N      ++S++AG  G+NL  ANR+++ D  WN
Sbjct: 510  YQYVRLDGSMSIKKRMKVVDRFNDP-NSNDFLFMLSSKAGGCGLNLIGANRLVMFDPDWN 568

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTI 1289
            P  D QA+ R WR GQ K VF YRL++ GT+EEKI +RQ  K+ L++ VVD +  V R  
Sbjct: 569  PANDDQAMARVWRDGQKKEVFIYRLLSTGTIEEKILQRQTHKKALSSCVVDEEVDVERHF 628

Query: 1290 SKEEMLHLFEF 1300
            S  E+  LF++
Sbjct: 629  SLNELKELFKY 639


>gi|359475198|ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 934

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 193/594 (32%), Positives = 298/594 (50%), Gaps = 75/594 (12%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++FM++     +  + S     GCILA  MGLGKT Q I  LYT +R    G
Sbjct: 182  LRPHQREGVQFMFD----CVSGLSSTANISGCILADDMGLGKTLQSITLLYTLLRQGFDG 237

Query: 784  ---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG- 839
               ++ A+IVTP +++ NW+ E  KW    ++   +  L + +RD     +  + +    
Sbjct: 238  KAMVKKAIIVTPTSLVSNWEAEIKKWVGERVQ---LVALCESTRDDVVFGIDSFTSPHSP 294

Query: 840  --VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              V ++ Y  FR  S            +  H+     D+L+CDEAH +KN +  T +AL 
Sbjct: 295  LQVLIVSYETFRMHS-----------SKFSHS--GSCDLLICDEAHRLKNDQTLTNRALA 341

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             + C+RR+ L+G+P+QN+L E++ MV+F   G LG +  FR  ++ PI  G+   +  E+
Sbjct: 342  ALACKRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREPTAAEEE 401

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
             K+  +RS  L   +  F+ R    ++   LPPK V V+  +LSPLQ  LY  F  +H  
Sbjct: 402  KKLGAERSAELSSTVNQFILRRTNALLSNHLPPKIVEVVCCRLSPLQSELYNHF--IHSK 459

Query: 1018 TNDRVSNEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVV 1076
               +V NE++++S    Y  AL ++ NHP ++  T   G       ED      M +   
Sbjct: 460  NVKKVINEEMKQSKILAYITALKKLCNHPKLIYDTVKSGNQGTSGFEDC-----MRFF-- 512

Query: 1077 IGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDK 1136
                P  M     G    G            E  + EL  SGKM +L  +L       D 
Sbjct: 513  ----PPEMFSGRSGAWTGG------------EGIWVEL--SGKMHVLARLLAHLRQKTDD 554

Query: 1137 SLVF-SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEP 1195
             +V  S    TLDL     ++L R        ++   + RLDG T  ++RQKLV RF++P
Sbjct: 555  RIVLVSNYTQTLDL----FAQLCR--------ERRYPYLRLDGTTSINKRQKLVNRFSDP 602

Query: 1196 LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRL 1255
            L       L+S++AG  G+NL   NR+++ D  WNP  D QA  R WR GQ K V+ YR 
Sbjct: 603  LKDEF-VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRF 661

Query: 1256 MAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT------ISKEEMLHLFEFGDD 1303
            ++ GT+EEK+++RQ++KEGL  +V+ ++Q          +S E++  LF F ++
Sbjct: 662  LSTGTIEEKVFQRQMSKEGL-QKVIQQEQKDSLKTQGNFLSTEDLRDLFSFHEN 714


>gi|412993466|emb|CCO13977.1| DNA repair and recombination protein RAD54 [Bathycoccus prasinos]
          Length = 1135

 Score =  271 bits (692), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 175/603 (29%), Positives = 293/603 (48%), Gaps = 60/603 (9%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
            AV++ + ++  L+ HQ  G+ F++E ++  +R    G +G GCILA  MGLGKT Q IA 
Sbjct: 164  AVKVDNMLTRWLRPHQREGVSFLYECVM-GLR----GFEGAGCILADDMGLGKTLQAIAL 218

Query: 773  LYTAMRSV-----NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR 827
            ++T + +         ++  +IV P +++ NW  E +KW   ++K   +        +  
Sbjct: 219  MWTLLNTSIEEDQKPTVKKVVIVCPTSLVANWDAECIKWLKGKVKTTPICGDSRADAESA 278

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
             ++    +++  V ++ Y  FR         +R      C        +++CDEAH +KN
Sbjct: 279  VKMFLAPQSRSQVLIVSYETFR------IYHERFTTESSCQ-------LVICDEAHRLKN 325

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
                T QAL ++ C+RRI L+G+P+QN+L E+Y MV F   G LG++ EF  +++ PI  
Sbjct: 326  GETLTNQALAKMACKRRIMLSGTPMQNHLDEFYSMVSFCNPGILGTTKEFAKKYERPILA 385

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            G+   +T  ++   N+R+ +L   +  F+ R    ++ K LPPK + ++  K +PLQR +
Sbjct: 386  GREPYATDAELAKANERNEMLSVIVNKFILRRTNTILSKHLPPKVIEIVCCKTTPLQRSI 445

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG-ILQLTKDKGYPSREDAEDSS 1066
            Y+  L        +   +       A   AL ++ NHP  I    ++K Y  + D  ++ 
Sbjct: 446  YEHLLSEKARIAQKTGKQ---MDVLACITALKKLCNHPKLIFDAIREKKYAGKTDGGNAI 502

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
             D              N+  +  G  D G   +           ++   + GK  +L  +
Sbjct: 503  DD--------------NLTPYFHGLYDGGGSGRGGRAGGQMCEGWEW--HGGKFAVLARL 546

Query: 1127 L-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSER 1185
            L  + +   D+ ++ S    TLDL+E    +   P              RLDG T  ++R
Sbjct: 547  LHQLRTETSDRIVIISNYTQTLDLVEILCRQNNYPS------------LRLDGGTSINKR 594

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
            QKLV  FN+  N      L+S++AG  GINL   NR+++ D  WNP  D QA  R WR G
Sbjct: 595  QKLVNAFNDLTNNEF-IFLLSSKAGGCGINLVGGNRLVLFDPDWNPANDKQAAARCWRDG 653

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ--VHRTISKEEMLHLFEFGDD 1303
            Q K  + YR ++ GT+EEK+++RQ+ K+ L + V  R       +++ E++  LF   D 
Sbjct: 654  QKKKCYEYRFLSSGTIEEKVFQRQLAKQALTSVVDGRGSGLEQMSMTTEDLQQLFSL-DV 712

Query: 1304 ENP 1306
            E P
Sbjct: 713  ECP 715


>gi|322791142|gb|EFZ15704.1| hypothetical protein SINV_11452 [Solenopsis invicta]
          Length = 843

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 184/599 (30%), Positives = 294/599 (49%), Gaps = 88/599 (14%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+ V +   + AKL+ HQ  G+ F++E ++     ++  D   G ILA  MGLGKT Q I
Sbjct: 235  EQEVSVDPCLVAKLREHQRYGVVFLYECLM----GLRVPDY-FGAILADEMGLGKTLQCI 289

Query: 771  AFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR 827
            A ++T ++    G   ++  LI+TP ++ +NW++EF+KW  S     R+F     ++ + 
Sbjct: 290  ALIWTMLKKGPYGKPIVKRVLIITPSSLCNNWEKEFVKWLGSH----RIFPYVVGAKTKP 345

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
             + +     K  V +I Y  F        +K      EI        D++VCDE H +KN
Sbjct: 346  KDFIK--YPKNSVMIISYEMF--------IKCHMEINEIVF------DLIVCDEGHRLKN 389

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
                  + L +  C++RI LTG+P+QN+L E+Y ++DF+  G LG++ E++N ++ PI  
Sbjct: 390  NNVKAAKLLYEANCKKRIILTGTPIQNDLKEFYALIDFINPGILGTATEYKNYYEEPIVA 449

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
             Q  ++  + + +  +RS  LYE+ K F+ R   + + K LP K   V+   LS  Q+ L
Sbjct: 450  SQCPHANDDVLSLGKERSTELYERTKSFILRRTQSTINKYLPHKYEIVLFCSLSKKQKDL 509

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            Y    D      +++  E      F+   AL +I NHP +                  + 
Sbjct: 510  YSLVTDAWF---NKICLEDKNSMHFSIIIALKKICNHPNLF----------------INE 550

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
             EN+ YN +      +     Q K D+ F                  +Y GK+ +L  +L
Sbjct: 551  KENVLYNAL------SKTCMSQIKQDNNFN-----------------EYCGKVTILQTLL 587

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFY--LSKLPRPGKQGKLWKKGKDWYRLDGRTESSER 1185
                   +K ++ S    TLDL+E    + KL               + RLDG T SS R
Sbjct: 588  RNLKKTDEKLVLVSYYTQTLDLLEIICDMEKL--------------KFLRLDGSTPSSVR 633

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
             K+ E+FN   +   K  L+S +AG +G+NL  A+R+++ D  WNP  D+QA+ R WR G
Sbjct: 634  LKITEQFNTRTDNS-KVLLLSAKAGGVGLNLPGASRLVLFDSDWNPASDMQAMARIWRDG 692

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV-HRTISKEEMLHLFEFGDD 1303
            Q + V+ YRL+  GT+EEKIY+RQ++K  L+  VVD   +    +S  E+  LF   +D
Sbjct: 693  QKRNVYIYRLLTTGTIEEKIYQRQISKANLSESVVDLNHLGSLKLSTAELKDLFTLAND 751


>gi|30089126|emb|CAD35753.1| X-linked nuclear protein [Dugesia japonica]
          Length = 1076

 Score =  270 bits (691), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/435 (34%), Positives = 248/435 (57%), Gaps = 46/435 (10%)

Query: 632  KKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASI 691
            +K I +I+ +++L   TK    +E +R++R++  Q ++       N    D D+      
Sbjct: 146  RKNIHKIMTNSKLSIATKTSAQLESDRRKRIEERQKEY-------NKDVPDEDI------ 192

Query: 692  EVLGDAITGYIVNVVREKGEE---AVRIPSSISAKLKAHQVVGIRFMWENIIQSI----- 743
                  +T   + +V EK ++    V +   I   LK HQ+  ++F+W+ +I+S+     
Sbjct: 193  -----LMTSSNITMVLEKDQDDNSIVEVDKLIVDNLKPHQMEAVQFLWDCVIRSVECLEK 247

Query: 744  -RKVKSGDKGL-----GCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLH 797
             ++V S D        GC+LAH MGLGKT  +IAF++T + +  L LRT L+V PVN   
Sbjct: 248  SQQVDSEDDKNASAVGGCVLAHCMGLGKTLSLIAFMHTMLTTSCLKLRTCLVVCPVNTAL 307

Query: 798  NWKQEFMKWRPSELKPLRVF-MLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFG-- 854
            NWK+E+  W P E K + +F +     +  + +++  W  KGGV +IGY  +R L+ G  
Sbjct: 308  NWKKEWEMWMPKE-KLVNIFEVCSTECKKSKVQVVQDWYHKGGVLIIGYEMYRLLATGDS 366

Query: 855  KHVKDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQ 913
            + V+ + + +++  AL + GPD +VCDE H++KN ++   + + ++  +RRI LTG+PLQ
Sbjct: 367  RTVRRKIVKQKLNEALVEPGPDFVVCDEGHLLKNNKSAINKVITKIFTRRRIVLTGTPLQ 426

Query: 914  NNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLK 973
            N L+EY+ MV FV+   LG+  EF NRF NPI NGQH NST  DV +M +RSHIL++ L 
Sbjct: 427  NKLLEYHTMVQFVKPNLLGTQKEFLNRFVNPINNGQHINSTPYDVSLMKKRSHILFKMLD 486

Query: 974  GFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA 1033
            G V R D + + K LPPK  +V+ ++LS +Q +LY++++ +     D       + S F 
Sbjct: 487  GCVHRRDYSALVKYLPPKYEYVVKIRLSDIQVQLYRQYISI---CKDN------KHSLFQ 537

Query: 1034 GYQALAQIWNHPGIL 1048
             +   ++IW  P ++
Sbjct: 538  DHLTFSRIWTRPFVI 552



 Score =  197 bits (501), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 99/232 (42%), Positives = 149/232 (64%), Gaps = 30/232 (12%)

Query: 1099 KDWWNDLL---HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLS 1155
            K WW++++   HEH   +++ SGK+ +L  IL   S++GDK ++FS S+  LD+IE YL 
Sbjct: 681  KHWWSNIIQPEHEH---QIEISGKLSVLFQILRKASDIGDKIIIFSHSLLVLDIIEKYLQ 737

Query: 1156 KL---------------------PRPGKQGKL---WKKGKDWYRLDGRTESSERQKLVER 1191
            +L                     P   ++  +   W KG D+ R+DG T++  R  +  R
Sbjct: 738  ELHTIAEKIQEDLKKLNDSIDQSPTTAEEDIIYNSWIKGLDYDRMDGSTQAFVRADIQSR 797

Query: 1192 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1251
            FN   + R++  LISTRAG +G+NL +ANRVII D SWNP++D+QAI+R++R+GQ KPV+
Sbjct: 798  FNSFEDHRLRLFLISTRAGGMGVNLVAANRVIIFDVSWNPSHDVQAIFRSYRFGQNKPVY 857

Query: 1252 AYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
             YR ++ GTMEEKIY+RQVTK+ L+ RVVD QQ+ R  ++E++  L++F  D
Sbjct: 858  VYRFVSQGTMEEKIYERQVTKQSLSLRVVDEQQISRYFTEEDLRSLYKFEPD 909


>gi|354548455|emb|CCE45191.1| hypothetical protein CPAR2_702030 [Candida parapsilosis]
          Length = 1011

 Score =  270 bits (690), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 198/660 (30%), Positives = 303/660 (45%), Gaps = 131/660 (19%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            +A ++P  I   L  +Q   ++++WE   Q            G I+   MGLGKT Q+I+
Sbjct: 302  DAFKLPGDIYPSLFDYQKTCVQWLWELYSQKT----------GGIIGDEMGLGKTIQIIS 351

Query: 772  FLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED---------- 821
            FL   +    L  +  LIV P  VL+ W  EF +W P    PLR  +L            
Sbjct: 352  FL-AGLHYSGLLRKPVLIVVPATVLNQWVNEFHRWWP----PLRCVILHSIGSGMGENAK 406

Query: 822  VSRDRRAELLAKWR-------------------------AKGGVFLIGYTAFRNLSFGKH 856
            VS  +  E +  W                          AKG V +  Y   R   + K+
Sbjct: 407  VSEAKMEEYMENWDPQTSKSSLKGIKTQINAQKIVDRVVAKGHVLITTYVGLR--IYSKY 464

Query: 857  VKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNL 916
            +    + +E  +         V DE H I+N  +D +   KQ+K   RI L+G+P+QNNL
Sbjct: 465  I----LPQEWGYC--------VLDEGHKIRNPDSDISLTCKQIKTVNRIILSGTPIQNNL 512

Query: 917  MEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV 976
             E + + DF+  G LG+   F+ +F  PI  G + NS +  VK   + + +L + +  ++
Sbjct: 513  TELWSLFDFIFPGRLGTLPVFQQQFSIPINVGGYANSNNLQVKTAYKCAVVLRDLISPYL 572

Query: 977  QRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQ 1036
             R   N V KDLP K+  V+ VKL+ +Q+ LY++FL+    + D  S  K +++   G  
Sbjct: 573  LRRLKNDVAKDLPKKSEMVLFVKLTRIQQDLYEKFLE----SEDLNSILKGKRNVLMGVD 628

Query: 1037 ALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGF 1096
             L +I NHP ++                                     D L  K++ G 
Sbjct: 629  VLRKICNHPDLV-----------------------------------YRDALMHKSNYGD 653

Query: 1097 FQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK 1156
             +K                 SGKM +L ++L +  + G K+L+F Q+   LD++E ++S 
Sbjct: 654  PKK-----------------SGKMQVLKNLLQLWQSEGHKTLLFCQTRQMLDILEKFVSN 696

Query: 1157 LPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
            LP    Q + +     + R+DG T  S+RQ LV+ FN   N  V   L++T+ G LG+NL
Sbjct: 697  LPCLNDQAQYFT----YLRMDGSTAISQRQSLVDEFNNDPN--VHVFLLTTKVGGLGVNL 750

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              A+RVII D  WNP+ D+QA  RAWR GQ K +  YRLM  G++EEKIY RQ+ K  L 
Sbjct: 751  TGADRVIIYDPDWNPSTDIQARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLQ 810

Query: 1277 ARVVDRQQVHRTISKEEMLHLFEFGDD-----ENPDPLTAVSKENGQGSSQNTNCALKHK 1331
             +++   +  R     ++  LF  GD      E  D   A S++  +GS    + +L  K
Sbjct: 811  NKILKDPKQRRFFKTNDLHDLFTLGDQDEKGTETGDMFHARSEQKYRGSKSRKSASLTKK 870


>gi|145338703|ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana]
 gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis thaliana]
 gi|116518260|gb|ABJ99465.1| RAD54-like protein [Arabidopsis thaliana]
 gi|332642687|gb|AEE76208.1| Rad54-like protein [Arabidopsis thaliana]
          Length = 910

 Score =  270 bits (689), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 194/608 (31%), Positives = 297/608 (48%), Gaps = 81/608 (13%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL----GCILAHTMGLGKTFQ 768
             + + S +   L+ HQ  G++FM++ +        SG  G     GCILA  MGLGKT Q
Sbjct: 169  TIMVHSVLVKFLRPHQREGVQFMFDCV--------SGLHGSANINGCILADDMGLGKTLQ 220

Query: 769  VIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
             I  LYT +     G   ++ A+IVTP +++ NW+ E  KW    ++   +  L + +RD
Sbjct: 221  SITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQ---LIALCESTRD 277

Query: 826  ---RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
                  +   + R+   V +I Y  FR  S            + C +  +  D+L+CDEA
Sbjct: 278  DVLSGIDSFTRPRSALQVLIISYETFRMHS-----------SKFCQS--ESCDLLICDEA 324

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN +  T +AL  + C+RR+ L+G+P+QN+L E++ MV+F   G LG +  FR+ ++
Sbjct: 325  HRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYE 384

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
             PI  G+   +T E+  +   RS  L  ++  F+ R    ++   LPPK + V+  K++ 
Sbjct: 385  APIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTT 444

Query: 1003 LQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA 1062
            LQ  LY  F+           N K  K   A   AL ++ NHP ++  T   G P     
Sbjct: 445  LQSTLYNHFISSKNLKRALADNAKQTK-VLAYITALKKLCNHPKLIYDTIKSGNPGTVGF 503

Query: 1063 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 1122
            E                   N  +F   +   G  +   W     +  + EL  SGKM +
Sbjct: 504  E-------------------NCLEFFPAEMFSG--RSGAWTG--GDGAWVEL--SGKMHV 538

Query: 1123 LLDILTMCSNMGDKSLVF-SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            L  +L       D  +V  S    TLDL     ++L R        ++   + RLDG T 
Sbjct: 539  LSRLLANLRRKTDDRIVLVSNYTQTLDL----FAQLCR--------ERRYPFLRLDGSTT 586

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
             S+RQKLV R N+P  K     L+S++AG  G+NL  ANR+++ D  WNP  D QA  R 
Sbjct: 587  ISKRQKLVNRLNDP-TKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARV 645

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT------ISKEEML 1295
            WR GQ K V+ YR ++ GT+EEK+Y+RQ++KEGL  +V+  +Q   +      +S E++ 
Sbjct: 646  WRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGL-QKVIQHEQTDNSTRQGNLLSTEDLR 704

Query: 1296 HLFEFGDD 1303
             LF F  D
Sbjct: 705  DLFSFHGD 712


>gi|291233864|ref|XP_002736872.1| PREDICTED: excision repair cross-complementing rodent repair
            deficiency, complementation group 6-like [Saccoglossus
            kowalevskii]
          Length = 1503

 Score =  270 bits (689), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 197/640 (30%), Positives = 298/640 (46%), Gaps = 104/640 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  ++IP  +  KL  +Q  G++++WE   Q            G I+   MGLGKT Q+I
Sbjct: 520  EGGLKIPGQVWCKLYKYQKTGVKWLWELHCQQT----------GGIVGDEMGLGKTIQII 569

Query: 771  AFL----YTAMR---SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
            +FL    Y+ ++      +GL   LIV P  V+H W +EF  W P      RV +  D  
Sbjct: 570  SFLSGLKYSKLQIKGDKYIGLGPVLIVCPTTVMHQWVREFHTWYPD----FRVAIFHDSG 625

Query: 824  R--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 881
                 +A L+       GV +  Y A R            + +++    Q   D ++ DE
Sbjct: 626  SYSGSKASLVYDIVKSRGVLVTSYAAVR------------IQQDMLLRYQ--WDYVILDE 671

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
             H I+N  AD TQA KQ +   RI L+GSP+QNNL E + + DFV  G LG+   F   F
Sbjct: 672  GHKIRNPDADVTQACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMQEF 731

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNV-VKKDLPPKTVFVITVK 999
              PI  G ++N++   V+   + + +L + +  ++ +RM  +V V  +LP K   V+  +
Sbjct: 732  SVPITMGGYSNASDVQVQTAYKCACVLRDTINPYLLRRMKQDVKVNLNLPDKNEQVLFCR 791

Query: 1000 LSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
            L+P Q  +YK ++D    H     R          FAG   L +I NHP I       G 
Sbjct: 792  LTPEQVDVYKEYIDSGECHAILTGRYK-------VFAGLITLRKICNHPDI-----STGG 839

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
            P                 V+ G+                 ++ D  +D+  E  Y     
Sbjct: 840  P----------------RVLKGD-----------------YEHD--DDIPEEMRYGYWKK 864

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            SGK++++  +L +    G + L+F+QS   LD+++ +++             +G ++ R+
Sbjct: 865  SGKLIVIESLLKLWKKQGHRVLLFTQSKQMLDILDSFVTS------------RGYNYMRM 912

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG T  S RQ  V RFN+  +K V   L++TR G LG+NL  A+RV+I D  WNP+ D+Q
Sbjct: 913  DGSTPISSRQPAVNRFNQ--DKSVFVFLLTTRVGGLGVNLIGADRVVIYDPDWNPSTDMQ 970

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            A  RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  
Sbjct: 971  ARERAWRIGQNKQVTIYRLLTSGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKTNDLHE 1030

Query: 1297 LFEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSH 1336
            LF     +        +   G GS    N   K K+  SH
Sbjct: 1031 LFTLTSQDTKQGTETHAIFAGTGSDITINLK-KSKIRRSH 1069


>gi|405953464|gb|EKC21121.1| DNA excision repair protein ERCC-6 [Crassostrea gigas]
          Length = 1410

 Score =  269 bits (688), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 198/626 (31%), Positives = 286/626 (45%), Gaps = 106/626 (16%)

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E+ E  +++PS I +KL  +Q VG+ ++WE   QS           G I+   MGLGKT 
Sbjct: 427  EELEGGLKVPSRIWSKLFNYQRVGVSWLWELHCQSA----------GGIIGDEMGLGKTI 476

Query: 768  QVIAFLYTAMRSVNL--------GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML 819
            Q+IAFL  A+R   L        GL   +IVTP  V+  W +EF KW P      RV +L
Sbjct: 477  QMIAFL-AALRQSKLASKHFKYCGLGPVIIVTPTTVMSQWVKEFHKWWPL----FRVAIL 531

Query: 820  EDVSRDRRAELLAKWR--AKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP--- 874
                    AE    W      GV +  +T                   + H  +  P   
Sbjct: 532  HSSGSFTGAEEDLIWSIVKDRGVLITSFTTL-----------------VVHQDKVLPYDW 574

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
              +V DE H I+N  A  TQA KQ +   RI L+GSP+QNNL E + + DFV  G LG+ 
Sbjct: 575  HYVVLDEGHKIRNPDAQVTQACKQFRTPHRIILSGSPIQNNLKELWSLFDFVFPGKLGTL 634

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             +F   F  PI  G + N+T   V+   + + +L + +  ++ R     VK DLP K   
Sbjct: 635  PDFLQHFSIPIVQGGYANATEIQVQTAYKCACVLRDTINPYLLRRMKADVKIDLPSKNEQ 694

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
            V+  +L+  QR +Y  +L     + +  +    +   FAG   L +I NHP I       
Sbjct: 695  VLFCRLTDEQRDVYLEYLQ----SRECQAILSGKYQIFAGLITLRKICNHPDICT----- 745

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
            G P     ED+  D  ++Y                     G++++               
Sbjct: 746  GGPKLLIGEDTQGDPTLEY---------------------GYWKR--------------- 769

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGKM+++  +L +    G + L+FSQS   LD+ E ++              +   + 
Sbjct: 770  --SGKMIVVEALLKLWKQQGHRVLLFSQSRAMLDIFESFVQN------------QKYCYL 815

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            R+DG T  S RQ L+  +N+  +  +   L++TR G LG+NL  ANRVII D  WNP+ D
Sbjct: 816  RMDGGTPISSRQALITTYNQ--DPSIYLFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTD 873

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
             QA  R WR GQTK V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++
Sbjct: 874  TQARERTWRIGQTKQVTIYRLLTSGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDL 933

Query: 1295 LHLFEFGDDENPDPLTAVSKENGQGS 1320
              LFE G   N +     +   G GS
Sbjct: 934  YELFELGSKGNKEGTETGAIFAGTGS 959


>gi|9294624|dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana]
          Length = 959

 Score =  269 bits (687), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 194/608 (31%), Positives = 297/608 (48%), Gaps = 81/608 (13%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL----GCILAHTMGLGKTFQ 768
             + + S +   L+ HQ  G++FM++ +        SG  G     GCILA  MGLGKT Q
Sbjct: 169  TIMVHSVLVKFLRPHQREGVQFMFDCV--------SGLHGSANINGCILADDMGLGKTLQ 220

Query: 769  VIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
             I  LYT +     G   ++ A+IVTP +++ NW+ E  KW    ++   +  L + +RD
Sbjct: 221  SITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQ---LIALCESTRD 277

Query: 826  ---RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
                  +   + R+   V +I Y  FR  S            + C +  +  D+L+CDEA
Sbjct: 278  DVLSGIDSFTRPRSALQVLIISYETFRMHS-----------SKFCQS--ESCDLLICDEA 324

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN +  T +AL  + C+RR+ L+G+P+QN+L E++ MV+F   G LG +  FR+ ++
Sbjct: 325  HRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYE 384

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
             PI  G+   +T E+  +   RS  L  ++  F+ R    ++   LPPK + V+  K++ 
Sbjct: 385  APIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTT 444

Query: 1003 LQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA 1062
            LQ  LY  F+           N K  K   A   AL ++ NHP ++  T   G P     
Sbjct: 445  LQSTLYNHFISSKNLKRALADNAKQTK-VLAYITALKKLCNHPKLIYDTIKSGNPGTVGF 503

Query: 1063 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 1122
            E                   N  +F   +   G  +   W     +  + EL  SGKM +
Sbjct: 504  E-------------------NCLEFFPAEMFSG--RSGAWTG--GDGAWVEL--SGKMHV 538

Query: 1123 LLDILTMCSNMGDKSLVF-SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            L  +L       D  +V  S    TLDL     ++L R        ++   + RLDG T 
Sbjct: 539  LSRLLANLRRKTDDRIVLVSNYTQTLDL----FAQLCR--------ERRYPFLRLDGSTT 586

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
             S+RQKLV R N+P  K     L+S++AG  G+NL  ANR+++ D  WNP  D QA  R 
Sbjct: 587  ISKRQKLVNRLNDP-TKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARV 645

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT------ISKEEML 1295
            WR GQ K V+ YR ++ GT+EEK+Y+RQ++KEGL  +V+  +Q   +      +S E++ 
Sbjct: 646  WRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGL-QKVIQHEQTDNSTRQGNLLSTEDLR 704

Query: 1296 HLFEFGDD 1303
             LF F  D
Sbjct: 705  DLFSFHGD 712


>gi|170058729|ref|XP_001865049.1| transcriptional regulator ATRX [Culex quinquefasciatus]
 gi|167877725|gb|EDS41108.1| transcriptional regulator ATRX [Culex quinquefasciatus]
          Length = 1203

 Score =  269 bits (687), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 159/506 (31%), Positives = 261/506 (51%), Gaps = 41/506 (8%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            +R+   +   +K HQ  G++FM++     +  VK+ + G GCILAH MGLGKT QVIA +
Sbjct: 687  IRVHPELVKTMKPHQREGVKFMYDCCYGGVSDVKNSN-GSGCILAHCMGLGKTLQVIALM 745

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWR---PSELKPLRVFMLEDVSRD-RRAE 829
             T +    +  +  +++ P + + NW QE   W     S +K L+VF L D S   ++ E
Sbjct: 746  NTVVCYPKMKTKRIIVICPKSTVMNWAQEIQHWLGDIQSGVK-LKVFYLPDSSNIIKKLE 804

Query: 830  LLAKWRAKGG----VFLIGYTAFRNLSFG--------KHVKD-RNMAREICHALQDGPDI 876
            +L  + +  G    V LIGY AFR+L F         KH +  R   R +   +  G D+
Sbjct: 805  VLRGFHSISGRMASVLLIGYEAFRSLVFYDASNRKGEKHSEGVRAEVRRVL--INPGADL 862

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++ DE H+IKN ++ T  ++ ++  +RRI LTG+P+QNNL EYYCMV+FV+  +LGS  E
Sbjct: 863  VILDEGHIIKNRKSQTNLSVAEIATKRRIILTGTPIQNNLNEYYCMVNFVKPAYLGSEKE 922

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F   +  PI+ GQH +S   DVK M  RS++L++ L  FVQR + +V++  LP K  +V+
Sbjct: 923  FNEHYATPIKQGQHADSAVADVKYMKYRSYVLHKNLVNFVQRKEFDVLRGFLPEKYEYVL 982

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
             V L+P+Q  LY+++L       + +  E         Y  + +IW HP +L+   +   
Sbjct: 983  YVPLTPVQEDLYEQYL-----KRNPLRQETGGAHLLEDYTFMRKIWTHPIVLERAWETAM 1037

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
              +   ++        +         + +D  + +         WW  ++     + L  
Sbjct: 1038 KKKYGVQERRRATRRAHGFDSSSDDDDDDDKDRTRAITNI----WWKQIISADDLESLFP 1093

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL---------- 1166
            S KM+LL +IL +C   G+K L+FS  +  L+++E ++  +   G   K           
Sbjct: 1094 SNKMILLFEILRLCQERGEKCLIFSGYVMVLNMVEHFMKMIDEQGTNPKAALYGFNKFRG 1153

Query: 1167 -WKKGKDWYRLDGRTESSERQKLVER 1191
             W+ G D+YR+DG T  S R +++ +
Sbjct: 1154 PWRPGMDFYRIDGGTSKSTRHEMITK 1179


>gi|297834836|ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297331140|gb|EFH61559.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 910

 Score =  269 bits (687), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 189/603 (31%), Positives = 295/603 (48%), Gaps = 71/603 (11%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
             + + S +   L+ HQ  G++FM++     +  +   +   GCILA  MG GKT Q I  
Sbjct: 169  TIMVHSLLVQFLRPHQREGVQFMFD----CVSGLHGSENINGCILADDMGFGKTLQSITL 224

Query: 773  LYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD---R 826
            LYT +     G   ++ A+IVTP +++ NW+ E  KW    ++   +  L + +RD    
Sbjct: 225  LYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQ---LIALCESTRDDVLS 281

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
              +   + R+   V +I Y  FR  S            + C +  +  D+L+CDEAH +K
Sbjct: 282  GIDSFTRPRSALQVLIISYETFRMHS-----------SKFCQS--ESCDLLICDEAHRLK 328

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            N +  T +AL  + C+RR+ L+G+P+QN+L E++ MV+F   G LG +  FR+ ++ PI 
Sbjct: 329  NDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPII 388

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
             G+   +T E+  +   RS  L  ++  F+ R    ++   LPPK + V+  K++ LQ  
Sbjct: 389  CGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQST 448

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS 1066
            LY  F+           N K  K   A   AL ++ NHP ++  T   G P     E   
Sbjct: 449  LYNHFISSKNLKRALADNAKQTK-VLAYITALKKLCNHPKLIYDTIKSGSPGTVGFE--- 504

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
                            N  +F   +   G  +   W     +  + EL  SGKM +L  +
Sbjct: 505  ----------------NCLEFFPAEMFSG--RSGAWTG--GDGAWVEL--SGKMHVLSRL 542

Query: 1127 LT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSER 1185
            L  +     D+ ++ S    TLDL     ++L R        ++   + RLDG T  S+R
Sbjct: 543  LANLRRKTNDRIVLVSNYTQTLDL----FAQLCR--------ERRYPFLRLDGSTTISKR 590

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
            QKLV R N+P  K     L+S++AG  G+NL  ANR+++ D  WNP  D QA  R WR G
Sbjct: 591  QKLVNRLNDP-TKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDG 649

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT-----ISKEEMLHLFEF 1300
            Q K V+ YR ++ GT+EEK+Y+RQ++KEGL   +   Q  + T     +S E++  LF F
Sbjct: 650  QKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNNTRQGNLLSTEDLRDLFSF 709

Query: 1301 GDD 1303
              D
Sbjct: 710  HGD 712


>gi|325190696|emb|CCA25192.1| unnamed protein product putative [Albugo laibachii Nc14]
          Length = 835

 Score =  269 bits (687), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 216/715 (30%), Positives = 323/715 (45%), Gaps = 158/715 (22%)

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E  E  V +   I   LKAHQ+ G+ F+ + I        S DKG  CILA  MGLGKT 
Sbjct: 94   ESEERKVFVAKEIRKSLKAHQIEGVHFLHQQI--------SRDKG--CILADYMGLGKTL 143

Query: 768  QVIAFLYTAMRSVNL-GLR-----TALIVTPVNVLHNWKQEFMKWRPSE-LKPLRVFMLE 820
            QVI  +++ M    + G         +I+ P   L NW  EF  W   E L    + +L+
Sbjct: 144  QVITAVHSYMIDTKMEGTYEDRNCRVMILCPTICLANWSNEFKIWLSKESLDNYTIAILD 203

Query: 821  DVSR--DRRAELLAKWRAKGGVFLIGYTAFRNL--------------------------- 851
              SR  D +  ++  W   GG+ L+GY  FR L                           
Sbjct: 204  ASSRTVDAKVRVVKTWSKDGGILLVGYELFRILLNPATSVPIAKREKSIQFCTKMVHNQL 263

Query: 852  ----------SFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVK 900
                      +  +    +N+ +E+   L D GPD++V DE H +K+  +   Q+L +VK
Sbjct: 264  QEPHQLITCSALAEKANGKNIVQELEALLCDPGPDLIVLDEGHRMKDPTSLLCQSLMKVK 323

Query: 901  CQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKI 960
              +RI LTG P+QN+L+EY+CMV+F R G+L +  +FR  ++ PI  G        DVK 
Sbjct: 324  TNKRIILTGYPVQNSLLEYWCMVNFARVGYLETYEKFRGYYERPILEG--------DVKR 375

Query: 961  MNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL----HG 1016
            + + S++    L+  V R    ++ + LPPK  +++  K S  Q  LY  FLD     + 
Sbjct: 376  IEELSNL----LEKVVLRRGKALLVEQLPPKKEWILCCKFSKAQYMLYCAFLDSVQPKNQ 431

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVV 1076
             ++   SN       F  Y  L Q+ NHP ++          R    D+    ++  NV 
Sbjct: 432  TSSQNTSNIGSGGDLFTAYSTLLQVMNHPDLIY--------QRVCPADNELPADLSQNVR 483

Query: 1077 IG-----------EKPRNMNDFLQGKNDDGFFQKD----WWNDLL-----------HEHT 1110
             G           E+ R + + +Q K      +++    W  +LL           +++ 
Sbjct: 484  DGDGWGWESMAKQEEKRALVEAIQQKKQQKKAEQEQNYVWARELLDGSCKFESDDTNDYR 543

Query: 1111 YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYL---------------- 1154
               +  SGKM +L+ I+      GDK +VFSQS+PTL LI  +L                
Sbjct: 544  TNIIANSGKMAILMHIIEKSMLCGDKVVVFSQSVPTLSLIGKFLRRKESVWTTNDSNSVS 603

Query: 1155 -------------------------------SKLPRPGKQGKL--WKKGKDWY-RLDGRT 1180
                                           S   R  K+ KL       DW+ ++DG T
Sbjct: 604  KSASSTRARVSCQARSRDPAGLSRRKQVRAKSTTSRAVKRSKLNSVDDTNDWFLQIDGST 663

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
              + R + +ERF    N RVK  L+STRAG+ GINLH+ANR+++ D SWNP+YD Q++ R
Sbjct: 664  VGTRRSEYIERFTSSDN-RVKVLLVSTRAGAEGINLHAANRLVLFDVSWNPSYDHQSMCR 722

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            + R GQ+K V  YRL++ GTME  IY++Q  K  L+  +VDR +       E M+
Sbjct: 723  SHRLGQSKTVHVYRLVSTGTMERMIYEQQRKKTSLSMALVDRSKNALMTPDEGMI 777


>gi|296220127|ref|XP_002756186.1| PREDICTED: DNA excision repair protein ERCC-6 [Callithrix jacchus]
          Length = 1490

 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 196/636 (30%), Positives = 299/636 (47%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 492  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 541

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 542  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 597

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 598  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 643

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 644  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFLE 703

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 704  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 763

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 764  CRLTDEQHKVYQNFIDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 810

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 811  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 836

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 837  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 884

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +K +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 885  GTTTIASRQPLITRYNE--DKSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 942

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 943  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1002

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK K+
Sbjct: 1003 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRKI 1038


>gi|290984663|ref|XP_002675046.1| helicase [Naegleria gruberi]
 gi|284088640|gb|EFC42302.1| helicase [Naegleria gruberi]
          Length = 960

 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 199/612 (32%), Positives = 305/612 (49%), Gaps = 81/612 (13%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            E V +P   S+ +K HQ+ GIRF W +II     +   D   GCIL H+ GLGKT  VIA
Sbjct: 246  EIVFLPKVFSSLIKPHQLEGIRFCWSHII-----LPPNDTLRGCILGHSNGLGKTLTVIA 300

Query: 772  FLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS---ELKPLRVFMLEDVSRDRRA 828
            F Y  ++  N G +  LI+ P +V+ NW++E   W  S   E  P  V      SR  R 
Sbjct: 301  FSYLFLK-YNKG-KKILIICPRSVIQNWEREISSWLHSLRLEYIPCYVLDHGKDSRVSRL 358

Query: 829  ELLAKWRAKGGVFLIGYTAFRNLSF-------GKHVKDR-NMAREICHALQDGPDILVCD 880
            E L +W +KGG+ L+ +T+F   +         K  ++R +  ++I   L+ G D+ + D
Sbjct: 359  EKLQEWDSKGGILLMCFTSFSRWTETQYSNIDSKSCQNRFDFEKKISDYLR-GCDLAIVD 417

Query: 881  EAHMIKNTRADTTQALK-QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            E H +KN  +  ++AL   ++ + RI LTG P Q +LMEYY ++D++R G+  S +EF++
Sbjct: 418  EGHRLKNPSSSISKALYCNIQTRNRIVLTGVPPQFDLMEYYTILDWIRPGY-WSLNEFKH 476

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
             F +P+ N          ++ + QR ++L  +L  FV R D +V+K  LPPK  +VI   
Sbjct: 477  LFIDPMNN--------HSIESIKQRYYVLKHELSYFVHRKDQSVLKSYLPPKREYVIQFH 528

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL------QLTKD 1053
               +Q  LY  F+          S +   K  +     L +I NHP  +         KD
Sbjct: 529  PHDIQVSLYNNFIQ---------SRDGDEKCIYYVTCMLQKILNHPDWVVDYCQANNPKD 579

Query: 1054 KGYPS-------REDAEDSS---------------SDENMDYNVVIGEKPRNMNDFLQGK 1091
                S       R D E S                SDE+M     I     NM +  +  
Sbjct: 580  SNTSSIKLFSDERLDLEGSKSSHADLNSYSLNTEISDEDMSVAPSISNTMFNMLEKAEKY 639

Query: 1092 NDDGFFQKDWWNDLLHEHTY--KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
             D    +   W   +H  +Y    +D+S KM+ L+ ++  C    +K LVFSQ   TLD+
Sbjct: 640  KDSS--ENIEWASPVHSRSYIMNAIDHSPKMLCLIRMIEQCFLSNEKILVFSQYQETLDI 697

Query: 1150 IEFYLSK------LPRPGKQGKLWKKGK---DWYRLDGRTESSERQKLVERFNEPLNKRV 1200
            IE  ++       LP   +   L +K K   D+YRLD     S  Q +V+ FN   +   
Sbjct: 698  IERIINNVNITTGLPLEDEHQPLKRKLKRNLDYYRLDESMSVSLGQSVVDSFNS--SNDA 755

Query: 1201 KCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGT 1260
               LIST+ GSLGI+L ++ ++++ D  W+ ++D QA++R++RYGQTKPV  YR + + T
Sbjct: 756  PLLLISTKVGSLGIDLSTSQKIVLYDVCWDSSWDNQAVFRSFRYGQTKPVSIYRFVMYNT 815

Query: 1261 MEEKIYKRQVTK 1272
            +E KI+++  TK
Sbjct: 816  IESKIFEKLCTK 827


>gi|320166021|gb|EFW42920.1| Ercc6 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1576

 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 202/675 (29%), Positives = 306/675 (45%), Gaps = 116/675 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  R+P  I +KL  +Q   + ++WE   Q++          G I+   MGLGKT +VI
Sbjct: 604  DEDFRVPGEIWSKLYRYQRTAVAWLWELHCQNV----------GGIVGDEMGLGKTIEVI 653

Query: 771  AFLYTAMRSVNLG-------------------------------LRTALIVTPVNVLHNW 799
            AFL   +R  NLG                               LR ALI+ P  ++  W
Sbjct: 654  AFL-AGLRYSNLGVYTPRASPYDALQPGARRRAQVARSSRQVQPLRAALIICPATLMQQW 712

Query: 800  KQEFMKWRPSELKPLRVFMLED--VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV 857
             QE  +W P    P RV +L +   S   + +L+ +   KG + +  Y + R        
Sbjct: 713  VQEIHRWWP----PFRVAILHESGASNSSKQDLVRRVLTKGHILVTTYGSIRV------- 761

Query: 858  KDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLM 917
               N A  +        D +V DE H I+N  A+ T   KQ     RI ++GSP+QNNL 
Sbjct: 762  ---NQALLLAQPW----DYVVLDEGHKIRNPDAEITMVCKQFSTPHRIIMSGSPIQNNLK 814

Query: 918  EYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQ 977
            E + + DFV  G LG+   F  +F  PI+ G + N+TS  V+   + + +L + +  ++ 
Sbjct: 815  ELWSLFDFVFPGRLGTLPIFLAQFAIPIDQGGYANATSVQVQTAYKCACVLRDAIGPYLL 874

Query: 978  RMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKI---RKSFFAG 1034
            R   + VK DLP K+  V+  KL+P Q+R+Y++FL       D    E I    ++   G
Sbjct: 875  RRLKSEVKIDLPDKSEQVLFCKLTPFQQRIYRKFL-------DSAEVEAILEGSRNVLYG 927

Query: 1035 YQALAQIWNHPGILQLTK---------------------DKGYPSRE--DAEDSSSDENM 1071
               L +I NHP ++   K                       G  +R+  DA     + + 
Sbjct: 928  VDILRKICNHPHLVTRRKRALDGTNSKSSMDSSPGGKSAKNGRNNRQAADAPSGGYESDN 987

Query: 1072 DYNVVI------GEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLD 1125
            DY V +       E+ R    F   +         W  D      Y   D SGK+V++  
Sbjct: 988  DYGVDLHEEGEEDEEQRGTLRFAPSQRSSHAPTTHWELD-TSSPDYGRKDLSGKLVVIDS 1046

Query: 1126 ILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSER 1185
            +L M    G + L+F+Q+  TLD+IE ++                  + R+DG T    R
Sbjct: 1047 LLRMWHAQGHRVLLFAQTRQTLDIIERWVR------------STAYRYRRMDGTTPIRSR 1094

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
            Q++V+ FN   N+ +   L++T+ G LG+NL  A+RV+I D  WNP+ D QA  RAWR G
Sbjct: 1095 QQMVDEFNT--NESLFLFLLTTKVGGLGVNLTGADRVVIFDPDWNPSTDTQARERAWRIG 1152

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            Q + V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  LF  G D +
Sbjct: 1153 QKRQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLSDPRQRRFFKSRDLYDLFTMGFDNH 1212

Query: 1306 PDPLTAVSKENGQGS 1320
             D     +  +G GS
Sbjct: 1213 DDETETGALFSGTGS 1227


>gi|17862980|gb|AAL39967.1| SD07188p [Drosophila melanogaster]
          Length = 655

 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/439 (36%), Positives = 239/439 (54%), Gaps = 65/439 (14%)

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 981
            M+ FV+   LG+  E+ NRF NPI NGQ+T+ST  D+++M  RSHIL++ L+G +QR D 
Sbjct: 1    MIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDY 60

Query: 982  NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQALA 1039
            +V+   LPPK  +V+   LS LQ++LY  ++  H    ++   + + K    F  +Q L 
Sbjct: 61   SVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTH---REQSGGDVVGKGARLFQDFQDLR 117

Query: 1040 QIWNHPGILQLTKD---------------KGYPSREDAEDSSSDENMDY----------- 1073
            +IW HP  L++  D               +G+   E  ED ++  + D            
Sbjct: 118  RIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDASMS 177

Query: 1074 ------NVVIGEKPRNMNDFLQGKNDDG------------FFQKD----WWNDLLHEHTY 1111
                    V   K RN N    G + D               QKD    WW   + E   
Sbjct: 178  GLAASSGKVKKRKTRNGN--AGGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEEREL 235

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL----- 1166
              + +S K+++LL +L  C  +GDK LVFSQS+ +LD+IE +LS +    K  +      
Sbjct: 236  NNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVG 295

Query: 1167 -----WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                 W  GKD++RLDG     +R+ + ++FN   N R +  LISTRAG LGINL +ANR
Sbjct: 296  DFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANR 355

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            V+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+Y+RQV K+  A RV+D
Sbjct: 356  VVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 415

Query: 1282 RQQVHRTISKEEMLHLFEF 1300
             QQ+ R  ++ +++ L+ +
Sbjct: 416  EQQISRHYNQTDLMELYSY 434


>gi|342885327|gb|EGU85368.1| hypothetical protein FOXB_04079 [Fusarium oxysporum Fo5176]
          Length = 805

 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 199/647 (30%), Positives = 312/647 (48%), Gaps = 98/647 (15%)

Query: 680  TLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFM 735
            T DG L A    + L +     I+ + ++   E  R+P  I  KL    + HQV G++FM
Sbjct: 173  TADGKLDAPLVHKSLAE-----ILGIKKKVDGEHPRVPVVIDPKLAKILRPHQVEGVKFM 227

Query: 736  WENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVT 791
            +  +   I      +K  GCI+A  MGLGKT Q I+ ++T ++ S + G   ++ A++V 
Sbjct: 228  YRCVTGLI-----DEKANGCIMADEMGLGKTLQCISLMWTLLKQSPDAGKPTIQKAIVVC 282

Query: 792  PVNVLHNWKQEFMKWR-PSELKPLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYT 846
            P +++ NW  E +KW  P+ + P  +      E+++R  R   +A  RA    V ++ Y 
Sbjct: 283  PASLVKNWANELVKWLGPNAINPFAIDGKASKEELTRQLRQWAIASGRAVTRPVIIVSYE 342

Query: 847  AFR-NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRI 905
              R N+   KH K                 +L CDE H +KN+ ++T  AL  +   RR+
Sbjct: 343  TLRLNVEELKHTKI---------------GLLFCDEGHRLKNSDSNTFNALNSLNVSRRV 387

Query: 906  ALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRS 965
             LTG+P+QN+L EY+ +  F     LG+  EFR R++ PI  G+  +++ ED K  ++ +
Sbjct: 388  ILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIPILRGRDADASEEDRKKGDECT 447

Query: 966  HILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRV 1022
              L   +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   D+      + 
Sbjct: 448  AALLNVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKSPDIQALLRGKG 507

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPR 1082
            S              L ++ NHP +L +           A+D    E    +  + ++ R
Sbjct: 508  SQP------LKAINILKKLCNHPDLLNM-----------ADDLPGSEQCFPDDYVPKESR 550

Query: 1083 NMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFS 1141
              +  +          K W              YSGKM +L  +L  +  +  DK ++ S
Sbjct: 551  GRDREI----------KSW--------------YSGKMAVLDRMLARIRQDTNDKIVLIS 586

Query: 1142 QSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVK 1201
                TLDL E    ++ R  + G L        RLDG    ++RQKLV+RFN+P      
Sbjct: 587  NYTSTLDLFE----RMCRSRQYGCL--------RLDGTMNVNKRQKLVDRFNDPEGDEF- 633

Query: 1202 CTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTM 1261
              L+S++AG  GINL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+
Sbjct: 634  VFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTI 693

Query: 1262 EEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            EEKI++RQ  K+ L++ VVD  + V R  S + +  LF++  D   D
Sbjct: 694  EEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPDTKSD 740


>gi|241950361|ref|XP_002417903.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and
            recombination protein, putative [Candida dubliniensis
            CD36]
 gi|223641241|emb|CAX45621.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and
            recombination protein, putative [Candida dubliniensis
            CD36]
          Length = 839

 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 201/630 (31%), Positives = 307/630 (48%), Gaps = 94/630 (14%)

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVK 747
            E+LG      IV    EK  +   +P  I  KL    + HQ+ G++F++      I    
Sbjct: 217  EILG------IVTNPEEKLSKYPDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDA-- 268

Query: 748  SGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFM 804
               +  GCI+A  MGLGKT Q +A ++T +R    G RT    +IV P +++ NW  E +
Sbjct: 269  ---RAKGCIMADEMGLGKTLQCLALMWTLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIV 325

Query: 805  KWR-PSELKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHV 857
            KW     L PL V      S D     L +W    G      V +I Y   R     ++V
Sbjct: 326  KWLGEGALTPLAVDGKSTKSSDL-GTALQQWSTAQGRNIVRPVLIISYETLR-----RNV 379

Query: 858  KDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLM 917
             D+    E+         +++ DE H +KN  + T  AL  ++C+RR+ L+G+P+QN+L 
Sbjct: 380  -DKLAGTEV--------GLMLADEGHRLKNGDSLTFTALNSLRCERRVILSGTPIQNDLS 430

Query: 918  EYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQ 977
            EY+ +++F   G+LG+ +EFR  ++N I  G+ + +T E+    +++   L + +  F+ 
Sbjct: 431  EYFSLLNFANPGYLGTRNEFRKNYENAILRGRDSTATDEERAKGDKKLGELSQMVSKFII 490

Query: 978  RMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSN--EKIRKSFFAGY 1035
            R   +++ K LP K  +V+   LSP+Q+ LY  F+     T+  +    + I        
Sbjct: 491  RRTNDILSKYLPIKYEYVLFTGLSPMQKTLYNHFI-----TSPEIKKLIKGIGSQPLKAI 545

Query: 1036 QALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDG 1095
              L ++ NHP +L L         +D E S+     DY   I       N  +Q      
Sbjct: 546  GMLKKLCNHPDLLDLP--------DDIEGSADLIPDDYQSSIAGGSAGRNREIQ------ 591

Query: 1096 FFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYL 1154
                 W              +SGK ++L   L  +     DK ++ S    TLDLIE   
Sbjct: 592  ----TW--------------FSGKFLILERFLRKINKETDDKIVLISNYTQTLDLIE--- 630

Query: 1155 SKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGI 1214
             K+ R  K G L        RLDG    ++RQKLV++FN+P N      L+S++AG  GI
Sbjct: 631  -KMCRYKKYGVL--------RLDGTMNINKRQKLVDKFNDP-NGPEFIFLLSSKAGGCGI 680

Query: 1215 NLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEG 1274
            NL  ANR++++D  WNP  D QA+ R WR GQ K  F YRL++ GT+EEKI++RQ  K  
Sbjct: 681  NLIGANRLVLIDPDWNPASDQQALARVWRDGQKKDCFIYRLISTGTIEEKIFQRQSMKMS 740

Query: 1275 LAARVVD-RQQVHRTISKEEMLHLFEFGDD 1303
            L++ VVD ++ V R  S E +  LF+F  D
Sbjct: 741  LSSCVVDEKEDVERLFSSENLRQLFKFQPD 770


>gi|157130680|ref|XP_001661961.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti]
 gi|108881922|gb|EAT46147.1| AAEL002647-PA [Aedes aegypti]
          Length = 791

 Score =  268 bits (684), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 200/636 (31%), Positives = 313/636 (49%), Gaps = 99/636 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKG--LGCILAHTMGLGKTFQVIAFLYTAMRS-- 779
            L+ HQ  G+RFM+E +        +G +G   GCI+A  MGLGKT Q I  L+T +R   
Sbjct: 140  LRPHQREGVRFMYECV--------TGKRGDFQGCIMADEMGLGKTLQCITLLWTLLRQSP 191

Query: 780  -VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKG 838
                 +  A+IV P +++ NW +EF KW    +  L +   +  S++   + L ++ A  
Sbjct: 192  DCKPTINKAVIVCPSSLVKNWYKEFGKWLGCRVNCLAI---DGGSKEHTTKELEQFMANQ 248

Query: 839  G------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRAD 891
                   V +I Y  FR  S               H L +     ++CDE H +KN    
Sbjct: 249  SMRHGTPVLIISYETFRLYS---------------HILNNSEVGAVLCDEGHRLKNCENL 293

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
            T QAL  +K +RR+ L+G+P+QN+L EYY ++ FV  G LGS++EFR +F+NPI  GQ  
Sbjct: 294  TYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSTNEFRRQFENPILRGQDA 353

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
            N+T  + +   +R   L  Q+   + R    ++ K LP K   V+ VK++ +Q  LYK F
Sbjct: 354  NATESERQKATERLQELTAQVNRCMIRRTSALLTKYLPIKFEMVVCVKMTEIQTELYKSF 413

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
            L           ++ IR+S     Q  A +     I  L K   +P              
Sbjct: 414  L----------QSDSIRRSMLEKAQVKASLTALSNITSLKKLCNHPD------------- 450

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLDIL-T 1128
                ++ EK +        +  DGF  ++    L   ++ KEL  ++ GK+++L  +L +
Sbjct: 451  ----LVYEKIQ--------ERADGF--ENAHKILPSNYSSKELRPEFGGKLMVLDCMLAS 496

Query: 1129 MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
            +  N  DK ++ S    TLDL E    KL R        K+G  + RLDG     +R K+
Sbjct: 497  IKMNTDDKIVLVSNYTQTLDLFE----KLCR--------KRGYCYVRLDGSMTIKKRGKV 544

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            V+ FN+P +K     ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K
Sbjct: 545  VDEFNKPDSKEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKK 603

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            P F YRL+A GT+EEKI++RQ  K+ L+  VVD  +   R  +++++  LF   +     
Sbjct: 604  PCFIYRLLATGTIEEKIFQRQTHKKALSNTVVDNDEDGERHFTQDDLKDLFRLDE----- 658

Query: 1308 PLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKL 1343
              + +S  + +   +     ++ KLP     C+  L
Sbjct: 659  --STISDTHSKFKCKRCVNNIQMKLPPEDSDCTSDL 692


>gi|430812744|emb|CCJ29865.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 796

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 194/611 (31%), Positives = 304/611 (49%), Gaps = 101/611 (16%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
            AV I   +S  L+ HQ+ G++F+++ +   +       +  GCI+A  MGLGKT Q I  
Sbjct: 199  AVVIDPKLSKILRPHQIEGVKFLYKCVTGMV-----DFRANGCIMADEMGLGKTLQCITL 253

Query: 773  LYTAMRSVNLGLRT----ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRR 827
            ++T ++      R+    A+IV P +++ NW  E  KW     + PL   + +  +RD+ 
Sbjct: 254  MWTLLKQSPQAKRSTIQKAIIVCPSSLVRNWANELDKWLGKGTINPL--IIDKKNNRDQL 311

Query: 828  AELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCD 880
               L+KW +  G      + +I Y                M R     L+  P  +L+CD
Sbjct: 312  VLSLSKWVSATGKDIVQPILIISY---------------EMLRMNIDQLKKCPIGLLLCD 356

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H +KN+ + T  AL  ++ QRRI L+G+P+QN+L EY+ +++FV  G LGS  EFR  
Sbjct: 357  EGHRLKNSESLTFSALDSLQVQRRIILSGTPIQNDLSEYFSLLNFVNPGLLGSRSEFRKT 416

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKL 1000
            F+ PI  G+    T +D +I + +   L   +  F+ R   +++ K LP K   V+   L
Sbjct: 417  FELPILKGRDALGTDKDREIGDHKLEELSVLVNKFIIRRTNDILSKYLPVKYEHVVFCNL 476

Query: 1001 SPLQRRLYKRFLDLHGFTN--DRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPS 1058
            SP Q+ LYK F+      N    + N+ ++   F     L ++ NHP +L +        
Sbjct: 477  SPFQKDLYKSFVSSREVNNLVKGIGNQPLKAIDF-----LKKLCNHPTLLDI-------- 523

Query: 1059 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD--- 1115
                                            +ND   F+  + ND + +++ K+ D   
Sbjct: 524  --------------------------------ENDLKQFEHCFPNDFIPKNS-KDRDIKI 550

Query: 1116 -YSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
             YSGKM++L  +L  +  +  DK ++ S    TL+L+E    KL R  + G L       
Sbjct: 551  WYSGKMMVLDRMLARIRKDTNDKIVLISNYTQTLNLLE----KLCRSRRYGSL------- 599

Query: 1174 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
             RLDG   +++RQKL+++FN+P +      L+S++AG  G+NL  ANR+I+ D  WNP  
Sbjct: 600  -RLDGTMNTNKRQKLIDKFNDPESDEF-IFLLSSKAGGCGLNLIGANRLILFDPDWNPAA 657

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKE 1292
            D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  Q V R  S +
Sbjct: 658  DQQALARVWRDGQKKDCFIYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQNVERHFSLD 717

Query: 1293 EMLHLFEFGDD 1303
             +  LFE   D
Sbjct: 718  SLRQLFELNLD 728


>gi|328874980|gb|EGG23345.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
          Length = 937

 Score =  267 bits (683), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 179/570 (31%), Positives = 284/570 (49%), Gaps = 86/570 (15%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +SAKL+ HQ  G++FM++ ++      + G KG GCILA  MGLGK+ Q IA L+T ++ 
Sbjct: 289  LSAKLRPHQRQGVQFMFDCLL----GFRGGYKGNGCILADDMGLGKSIQAIAILWTLLKQ 344

Query: 780  VNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRA 836
               GL TA   +IV P +++ NW +E  KW    +KP+ +       R R AEL    + 
Sbjct: 345  GPNGLPTAERAVIVAPSSLVGNWCKELKKWLGEGIKPVAIGGSTKYGRARLAELELGTK- 403

Query: 837  KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQAL 896
               V +I Y   R               EI      G  +++CDE H +KN    TT+A+
Sbjct: 404  --DVLVISYDQLRI-----------YCEEIIKISSIG--LVICDEGHRLKNPEIKTTKAV 448

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
              +   RR+ L+G+P+QN+L E++ MV+FV  G L +   F+N +  PI   ++ +++ E
Sbjct: 449  SMIPTPRRVILSGTPIQNDLNEFFAMVNFVNPGVLKNMSTFQNVYDAPILASRNPDASDE 508

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            D ++  +RS  L    + F+ R    V  + LP K  + + +KLSPLQ ++YK  +D   
Sbjct: 509  DKRLGRERSAELTRLTQQFILRRTAAVNVQYLPKKIEYTVFIKLSPLQHKIYKHLVDT-- 566

Query: 1017 FTNDRVSNEKIRKSFFAG----YQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
              N +  N       F+G       L ++ N P ++ L      P +ED           
Sbjct: 567  IKNQQFGN-------FSGALPLITTLKKLTNCPELIYL------PDKED----------- 602

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 1132
                    P  +ND +        F K+W   +          YSGK+  +  +L     
Sbjct: 603  --------PTQVNDSVL-----KLFPKEWNPKVFQPQ------YSGKLQFVDKLLAGIRK 643

Query: 1133 MG-DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 1191
               D+ ++ S    TL ++             G +  +G ++++LDG T    RQK+V+ 
Sbjct: 644  TSKDRVVIISNYTQTLTVLA------------GMMRTRGYEFFQLDGSTSVDNRQKMVDL 691

Query: 1192 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1251
            FN+P ++     L+S++AG +G+NL  AN +++ D  WNP  DLQA+ R WR GQ K V 
Sbjct: 692  FNDP-SRNEFVFLLSSKAGGVGLNLIGANHLVLYDPDWNPANDLQAMARVWREGQKKVVS 750

Query: 1252 AYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
             YR ++ GT+EEKI++RQ+TK  L+  VV+
Sbjct: 751  IYRTLSTGTIEEKIFQRQITKMALSTSVVE 780


>gi|145349626|ref|XP_001419229.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579460|gb|ABO97522.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 983

 Score =  267 bits (683), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 184/600 (30%), Positives = 293/600 (48%), Gaps = 93/600 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++FM+E ++  +R  +    G GCILA  MGLGKT Q I  L+T ++    G
Sbjct: 175  LRPHQREGVKFMFECVM-GLRDFE----GQGCILADDMGLGKTLQGITLLWTLLKQGIDG 229

Query: 784  ---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW------ 834
               ++ ALIV P +++ NW  E  KW    +K L       +    RAE+++        
Sbjct: 230  TPAVKRALIVCPTSLVSNWDDECNKWLNGRVKTL------PICDSTRAEVVSSVKQFLAP 283

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
            R    V ++ Y  FR  S      DR              D+++CDEAH +KN    T +
Sbjct: 284  RHLAQVMIVSYETFRIHS------DR-------FNFDGAVDLIMCDEAHRLKNGETLTNK 330

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            AL  V C RR+ L+G+P+QN+L E+Y MV F   G LG+  EF  +F+ PI  G+  ++T
Sbjct: 331  ALCSVPCLRRVMLSGTPMQNHLDEFYSMVGFCNPGLLGTPPEFAKKFERPILAGREPDAT 390

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
             ++++   + +  L + +  F+ R    ++ K LPPK V V+  KLSPLQ+ LY+ FL  
Sbjct: 391  EKELERAQEANSELSDLVNKFILRRTNTILSKHLPPKVVEVVCCKLSPLQQALYEHFL-- 448

Query: 1015 HGFTNDRVSNEKIR---KSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
                  + +N+ +     +      AL ++ NHP ++                       
Sbjct: 449  ----TSKAANQALTGKATAVLPAITALKKLCNHPKLI----------------------- 481

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDG-FFQKDWWNDLLHEHTYKEL-------DYSGKMVLL 1123
             Y+++ G K  N      G +    FF    ++                  ++SGK  +L
Sbjct: 482  -YDMINGAK--NTGQAASGFSTCAEFFTPGMYDGGGGRSGRGGGGMMHGWEEHSGKFAVL 538

Query: 1124 LDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK-KGKDWYRLDGRTE 1181
              +L  + +   D+ ++ S    TLDL+             G + + +   + RLDG T 
Sbjct: 539  ARLLANLRAETKDRIVIISNYTQTLDLV-------------GNMCRERNYPFVRLDGSTS 585

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
              +RQKLV++FN+P +      L+S++AG  GINL   NR+++ D  WNP  D QA  R 
Sbjct: 586  IGKRQKLVKQFNDPTSNSF-VFLLSSKAGGCGINLIGGNRLVLFDPDWNPANDKQAAARC 644

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTI-SKEEMLHLFEF 1300
            WR GQ K  + YR +A GT+EEK+++RQ++KE L   V    ++ +++ SK+E+  LF  
Sbjct: 645  WRDGQKKKCYLYRFLAAGTIEEKVFQRQLSKESLQNVVNGSGELEQSVMSKDELRKLFSL 704


>gi|297686445|ref|XP_002820759.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6
            [Pongo abelii]
          Length = 1493

 Score =  267 bits (682), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 299/636 (47%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 494  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 543

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 544  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 599

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 600  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 645

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 646  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 705

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++S  VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 706  QFSVPITMGGYSNASSVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 765

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 766  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 812

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 813  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 838

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 839  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 886

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 887  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 944

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 945  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1004

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK ++
Sbjct: 1005 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRRI 1040


>gi|410920762|ref|XP_003973852.1| PREDICTED: DNA repair and recombination protein RAD54-like [Takifugu
            rubripes]
          Length = 915

 Score =  267 bits (682), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 187/614 (30%), Positives = 299/614 (48%), Gaps = 77/614 (12%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            ++   +EK    V +   +   L+ HQ  G++F+WE +  + R++       GCI+A  M
Sbjct: 301  LIKADKEKVPVHVVVDPVLGKVLRPHQREGVKFLWECV--TGRRIPGS---YGCIMADEM 355

Query: 762  GLGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFM 818
            GLGKT Q I  ++T +R        +   ++V+P +++ NW  E  KW    + PL +  
Sbjct: 356  GLGKTLQCITLIWTLLRQSPDFKPEIDKVIVVSPSSLVRNWSNEVQKWLGGRVTPLAIDG 415

Query: 819  LEDVSRDRR-AELLAKW--RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPD 875
                  DR+    ++++  R    + +I Y  FR            +   + H  + G  
Sbjct: 416  GSKDDIDRQLVNFISQYGLRVPSPILIISYETFR------------LHAAVLHKGKVG-- 461

Query: 876  ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
            +++CDE H +KN+   T QAL  +  QRR+ ++G+P+QN+L+EY+ +V FV  G LG++ 
Sbjct: 462  LVICDEGHRLKNSDNQTYQALNAMAAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQ 521

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFV 995
            EF+ RF+ PI  G+  ++  +D +   ++   L   +   + R   +++ K LP K   V
Sbjct: 522  EFKKRFELPILKGRDADANEKDRQAGEEKLTELISVVNRCLIRRTSDILSKYLPVKIEQV 581

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +  +L+PLQ+ LY+RF+      +      K+  S  +   +L ++ NHP ++    DK 
Sbjct: 582  VCCRLTPLQKELYQRFVRQAEPLDSLEEGGKMNVSTLSSITSLKKLCNHPALIY---DKC 638

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
                E AE                         QG  D   F   +    +  H      
Sbjct: 639  V---EGAEG-----------------------FQGALD--LFPPGYCTKAVEPH------ 664

Query: 1116 YSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
             SGKM++L  IL +  +   DK ++ S    TLDL E    KL R         +   + 
Sbjct: 665  LSGKMLVLDYILAITKTTTDDKVVLVSNYTQTLDLFE----KLCR--------SRRYQYV 712

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P N      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 713  RLDGTMSIKKRAKIVERFNSPSNPEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 771

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL+A GT+EEKI +RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 772  EQAMARVWRDGQRKTCYIYRLLATGTIEEKILQRQAHKKALSSCVVDEEQNVERHFSLGE 831

Query: 1294 MLHLFEFGDDENPD 1307
            +  LF   +D   D
Sbjct: 832  LRELFSLNEDTVSD 845


>gi|238814383|ref|NP_001154953.1| RAD54-like [Nasonia vitripennis]
          Length = 749

 Score =  267 bits (682), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 187/623 (30%), Positives = 303/623 (48%), Gaps = 90/623 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---V 780
            L+ HQ  G++FM+E +       K  ++  GCI+A  MGLGKT Q I  L+T ++     
Sbjct: 156  LRPHQREGVKFMYECVTG-----KRIEEAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 210

Query: 781  NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW---RAK 837
               +  A+IV P +++ NW  E  KW  + +KPL +        D +     K    R  
Sbjct: 211  KPLIEKAIIVAPSSLVKNWYNEIFKWLQNRVKPLAIDGGSKSEIDAKLTGFMKTYGRRCA 270

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              + +I Y  FR            +   + H  QD   +++CDE H +KN+   T QAL 
Sbjct: 271  TPILIISYETFR------------LHAHVLH--QDDVGLVLCDEGHRLKNSENQTYQALM 316

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             +K +RR+ L+G+P+QN+L+EY+ ++ FV  G LG++ EFR +F+NPI  GQ   +T ++
Sbjct: 317  GLKAKRRVLLSGTPIQNDLLEYFSLIHFVNSGLLGTAAEFRKKFENPILRGQDAGATDKE 376

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DL 1014
             +I  +R   L   +   + R    ++ K LP K   V+ +K++PLQ +LYK F+    +
Sbjct: 377  RQIAQERLTELVTVVNKCLIRRTSALLSKYLPLKHELVVCIKMTPLQTQLYKNFIKSDSI 436

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 1074
                 D  + +K   S  +    L ++ NHP +                           
Sbjct: 437  KKSMQDDGTAKKGSLSALSAITLLKKLCNHPDL--------------------------- 469

Query: 1075 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLDILTMC-S 1131
              + EK +        +N DGF  +     L   ++ KE+  + SGK+++L  +L    S
Sbjct: 470  --VYEKIQ--------ENSDGF--EGAAKLLPANYSTKEVMPELSGKLMVLDCLLAFIKS 517

Query: 1132 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 1191
               DK ++ S    TLDL E   +            K+   + RLDG     +R K+V+ 
Sbjct: 518  TTTDKIVLVSNYTQTLDLFERLCA------------KRKYKYVRLDGTMSIKKRAKVVDN 565

Query: 1192 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1251
            FN P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ KP F
Sbjct: 566  FNNPDSGDF-IFMLSSKAGGCGLNLVGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 624

Query: 1252 AYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPDPLT 1310
             YR +  GT+EEKI++RQ  K+ L++ VVD+ + V R  ++ ++  LF   +    D  +
Sbjct: 625  VYRFLCTGTIEEKIFQRQAHKKALSSTVVDQDEDVARHFTQNDLRDLFSLEESTVSDTHS 684

Query: 1311 AVSKE---NG---QGSSQNTNCA 1327
                +   NG   +G  +N++C 
Sbjct: 685  KFKCKRCINGIEVKGPPENSDCT 707


>gi|403276713|ref|XP_003930033.1| PREDICTED: DNA excision repair protein ERCC-6 [Saimiri boliviensis
            boliviensis]
          Length = 1492

 Score =  267 bits (682), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 196/636 (30%), Positives = 298/636 (46%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 493  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 542

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 543  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 598

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 599  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 644

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 645  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFLE 704

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 705  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 764

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 765  CRLTDEQHKVYQNFIDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 811

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 812  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 837

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 838  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 885

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRVII D  WNP+ D QA
Sbjct: 886  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQA 943

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 944  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1003

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK K+
Sbjct: 1004 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRKI 1039


>gi|355782760|gb|EHH64681.1| hypothetical protein EGM_17967 [Macaca fascicularis]
          Length = 1495

 Score =  266 bits (681), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 298/636 (46%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 496  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 545

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 546  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 601

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 602  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 647

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 648  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 707

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 708  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 767

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 768  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 814

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 815  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 840

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 841  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 888

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 889  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 946

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 947  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1006

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK K+
Sbjct: 1007 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRKI 1042


>gi|301783501|ref|XP_002927161.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda
            melanoleuca]
          Length = 1481

 Score =  266 bits (681), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 190/633 (30%), Positives = 294/633 (46%), Gaps = 103/633 (16%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL- 773
            ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+IAFL 
Sbjct: 489  KMPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQIIAFLA 538

Query: 774  ---YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR- 824
               Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +    
Sbjct: 539  GLSYSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWP----PFRVAILHETGSY 594

Query: 825  -DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAH 883
              ++ +L+       G+ +  Y+  R       +   +++R   H        ++ DE H
Sbjct: 595  TQKKEKLIRDIAHCHGILITSYSYIR-------LMQDDISRHDWH-------YVILDEGH 640

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
             I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  +F  
Sbjct: 641  KIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSV 700

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVITVKLS 1001
            PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+  +L+
Sbjct: 701  PITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLT 760

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
              Q R+Y+ F+D       R+ N  ++   F+G  AL +I NHP +              
Sbjct: 761  EEQHRVYQNFIDSKEVY--RILNGDMQ--IFSGLVALRKICNHPDLF------------- 803

Query: 1062 AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 1121
                               P+N  D   G+ ++  F   +W              SGKM+
Sbjct: 804  ----------------SGGPKNPKDIPDGELEEDQF--GYWK------------RSGKMI 833

Query: 1122 LLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            ++  +L +    G + L+FSQS   LD++E +L              +   + ++DG T 
Sbjct: 834  VVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYSYLKMDGTTA 881

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
             + RQ L+ R+NE  +  +   L++TR G +G+NL  ANRVII D  WNP+ D QA  RA
Sbjct: 882  IASRQPLITRYNE--DTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERA 939

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFG 1301
            WR GQ K V  YRL+  GT+EEKI+ RQ+ K+ L  RV+   +  R     ++  LF   
Sbjct: 940  WRIGQKKQVTVYRLLTAGTIEEKIFHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLT 999

Query: 1302 DDENPDPLTAVSKENGQGSS-QNTNCALKHKLP 1333
              +        +   G GS  Q     LK KLP
Sbjct: 1000 SPDASQSTETSAIFAGTGSEVQAPKLHLKRKLP 1032


>gi|355562411|gb|EHH19005.1| hypothetical protein EGK_19625 [Macaca mulatta]
          Length = 1493

 Score =  266 bits (681), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 298/636 (46%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 494  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 543

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 544  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 599

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 600  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 645

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 646  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 705

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 706  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 765

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 766  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 812

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 813  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 838

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 839  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 886

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 887  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 944

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 945  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1004

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK K+
Sbjct: 1005 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRKI 1040


>gi|303277253|ref|XP_003057920.1| SNF2 super family [Micromonas pusilla CCMP1545]
 gi|226460577|gb|EEH57871.1| SNF2 super family [Micromonas pusilla CCMP1545]
          Length = 945

 Score =  266 bits (681), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 202/637 (31%), Positives = 302/637 (47%), Gaps = 97/637 (15%)

Query: 695  GDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLG 754
            GD   G+           AV +   + A L+ HQ  G+RFM+E +  S R+   G +G  
Sbjct: 264  GDVFPGF------GPASTAVVVDPILGASLRPHQRDGVRFMFECV--SGRRA-GGHRG-- 312

Query: 755  CILAHTMGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKW-RPSE 810
            C+LAH MG+GKT QVIA L+T ++    G   ++ A+I  P +++ NW  E  KW   + 
Sbjct: 313  CLLAHEMGMGKTLQVIALLWTLLKQGPRGTPMVKKAVIACPASLVSNWGAEMKKWLGQTR 372

Query: 811  LKPLRVFMLEDVSRDRRAELLAKW----RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
            L PL   ++E   +D ++ L   W    + +  V +  Y   R  S+   ++        
Sbjct: 373  LAPL---LVEGGDKDAKS-LFDDWALAHQKRYAVLVTSYETLR--SYASKIE-------- 418

Query: 867  CHALQDGPDILVCDEAHMIKNTRADT--TQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                  G D+LVCDEAH +KN + DT    AL+ +KC RR+ L+G+P+QN+L EY+ ++D
Sbjct: 419  ----SGGVDLLVCDEAHRLKNAKGDTLTVAALRALKCNRRVLLSGTPIQNDLTEYFGLMD 474

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F   G LG    F+  F  PIE  +   +++++  I   R   L    + +V R   + V
Sbjct: 475  FACPGLLGDLGPFKKIFSGPIERSRDKRASADERTIGAARGEELARMTREYVHRASASEV 534

Query: 985  --KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
              +  LPPKT +V+ V+LSP Q  LY   L               + S     Q L ++ 
Sbjct: 535  NARHGLPPKTEYVVFVRLSPTQAALYGALLKTAAVRGALGG----KGSPLTALQKLQRLC 590

Query: 1043 NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
            N     +L    G     D  D  +D   D   +    PR          DD F   D  
Sbjct: 591  NS---ARLLASGGGGGGGDVVD-ENDAEEDIRALRARVPRGY--------DDPF---DAT 635

Query: 1103 NDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
             D L         +SGK+ +LL +L   +   DK++V S    TLDLI   LS     G 
Sbjct: 636  ADALSP------SFSGKLAVLLTMLRATTPGVDKTVVVSGFTSTLDLIAAALSAA---GV 686

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
             GK+        RLDG    + R  +V +FN+   K     L+S +AG +G+NL  ANR+
Sbjct: 687  GGKVSS------RLDGSVAPNLRGAIVNKFND--GKGGDVFLLSCKAGGVGLNLVGANRL 738

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            ++ D  WNP  DLQA+ R WR GQ +PV  YRL++ GT+EE++++RQ+ K G  A  +  
Sbjct: 739  VLFDSDWNPANDLQALARVWREGQKRPVTIYRLVSTGTVEERVFQRQILK-GDVADAMGM 797

Query: 1283 QQVHR-------------------TISKEEMLHLFEF 1300
              V++                   ++SKEE+  LF F
Sbjct: 798  ASVNKRGGDGDGGGGGGGGGAGKMSLSKEELRDLFRF 834


>gi|109088973|ref|XP_001107536.1| PREDICTED: DNA excision repair protein ERCC-6 [Macaca mulatta]
          Length = 1496

 Score =  266 bits (681), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 298/636 (46%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 497  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 546

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 547  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 602

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 603  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 648

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 649  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 708

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 709  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 768

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 769  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 815

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 816  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 841

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 842  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 889

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 890  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 947

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 948  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1007

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK K+
Sbjct: 1008 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRKI 1043


>gi|356495839|ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
            max]
          Length = 894

 Score =  266 bits (681), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 196/595 (32%), Positives = 295/595 (49%), Gaps = 73/595 (12%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++FM++     +  + +     GCILA  MGLGKT Q I  LYT +     G
Sbjct: 168  LRPHQREGVQFMFD----CVSGLSTTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDG 223

Query: 784  ---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL--LAKWRAKG 838
               +R A+IVTP +++ NW+ E  KW   E  PL V + E    D  + +      ++  
Sbjct: 224  KPMVRKAIIVTPTSLVSNWEAEIKKWV-GERVPL-VALCESTREDVISGIDNFTSPKSNL 281

Query: 839  GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQ 898
             V ++ Y  FR  S                +  D  D+L+CDEAH +KN +  T +AL  
Sbjct: 282  QVLIVSYETFRMHSSK-------------FSSTDSCDLLICDEAHRLKNDQTITNRALAA 328

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            + C+RRI L+G+PLQN+L E++ MV+F   G LG    FR  ++ PI  G+   +T+E+ 
Sbjct: 329  LPCKRRILLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPAATAEEK 388

Query: 959  KIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL--DLHG 1016
            K+  ++S  L   +  F+ R    ++   LPPK V V+  KL+PLQ ++ K  L      
Sbjct: 389  KLGAEQSAELSVNVNRFILRRTNALLSNHLPPKIVEVVCCKLTPLQNKIIKTELINPCPQ 448

Query: 1017 FTNDRVSNEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNV 1075
                R   E++++S    Y  AL ++ NHP ++  T   G P     ED           
Sbjct: 449  SQVKRAITEELKQSKILAYITALKKLCNHPKLIYDTIRSGSPGTSGFED----------- 497

Query: 1076 VIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMG 1134
             I   P  M   L G++         W +L           SGKM +L  +L  +     
Sbjct: 498  CIRFFPPEM---LSGRSGSWTGGHGAWVEL-----------SGKMHVLARLLAHLRQRTN 543

Query: 1135 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 1194
            D+ ++ S    TLDL     ++L R  +   L        RLDG T  S+RQKLV  FN+
Sbjct: 544  DRIVLVSNYTQTLDL----FAQLCRERRYPHL--------RLDGSTSISKRQKLVNCFND 591

Query: 1195 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYR 1254
            P +K     L+S++AG  G+NL   NR+++ D  WNP  D QA  R WR GQ K V+ YR
Sbjct: 592  P-SKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYR 650

Query: 1255 LMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTI------SKEEMLHLFEFGDD 1303
             ++ GT+EEK+Y+RQ++KEGL  +V+ ++Q    +      S E +  LF F ++
Sbjct: 651  FLSAGTIEEKVYQRQMSKEGL-QKVIQQEQTDSLVAQGNLLSTENLRDLFTFHEN 704


>gi|358343867|ref|XP_003636017.1| DNA repair and recombination protein RAD54-like protein [Medicago
            truncatula]
 gi|355501952|gb|AES83155.1| DNA repair and recombination protein RAD54-like protein [Medicago
            truncatula]
          Length = 1004

 Score =  266 bits (681), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 198/610 (32%), Positives = 298/610 (48%), Gaps = 84/610 (13%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++FM++ +              GCILA  MGLGKT Q I  LYT +     G
Sbjct: 184  LRPHQREGVQFMFDCVAGLCETPDIN----GCILADDMGLGKTLQSITLLYTLICQGFDG 239

Query: 784  ---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG- 839
               +R A+IVTP +++ NW+ E  KW    +   R+  L + +R      +  +++  G 
Sbjct: 240  KPMVRKAIIVTPTSLVSNWEAEIKKWVGDRV---RLVALCETTRQDVISGINSFKSPQGK 296

Query: 840  --VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              V ++ Y  FR  S      ++  +   C       D+L+CDEAH +KN +  T +AL 
Sbjct: 297  FQVLIVSYETFRMHS------EKFSSSGSC-------DLLICDEAHRLKNDQTITNKALA 343

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             + C+RR+ L+G+PLQN+L E++ MV+F   G LG    FR  F+ PI  G+   +T+E+
Sbjct: 344  ALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGGIAHFRRHFEAPIICGREPAATAEE 403

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
             K+  +R+  L  ++  F+ R    ++   LPPK + V+  KL+PLQ  LYK F+     
Sbjct: 404  KKLGAERTAELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSDLYKHFIQSKNV 463

Query: 1018 TNDRVSNEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVV 1076
               R   E+++ S    Y  AL ++ NHP ++  T   G P     ED            
Sbjct: 464  --KRAITEELKHSKILAYITALKKLCNHPKLIYDTIRSGSPGTSGFED-----------C 510

Query: 1077 IGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGD 1135
            I   P NM   L G++         W +L           SGKM +L  +L  +     D
Sbjct: 511  IRFFPPNM---LSGRSGSWTGGDGGWVEL-----------SGKMQVLARLLHQLRQRTND 556

Query: 1136 KSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEP 1195
            + ++ S    TLDL     ++L R  K   L        RLDG T  S+RQKLV   N+P
Sbjct: 557  RIVLVSNYTQTLDL----FAQLCRERKYPHL--------RLDGATSISKRQKLVNCLNDP 604

Query: 1196 LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRL 1255
             +K     L+S++AG  G+NL  ANR+++ D  WNP  D QA  R WR GQ K V+ YR 
Sbjct: 605  -SKDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRF 663

Query: 1256 MAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT------ISKEEMLHLFEFGDDENPDPL 1309
            ++       +Y+RQ+ KEGL  +V+ R+Q          +S E++ +LF F  DEN   +
Sbjct: 664  LS-------VYQRQMAKEGL-QKVIQREQNDSVAAQSNFLSTEDLRNLFTF--DENVKQV 713

Query: 1310 TAVSKENGQG 1319
                  +G G
Sbjct: 714  AHAGPSDGPG 723


>gi|383416487|gb|AFH31457.1| DNA excision repair protein ERCC-6 [Macaca mulatta]
          Length = 1495

 Score =  266 bits (681), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 298/636 (46%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 496  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 545

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 546  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 601

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 602  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 647

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 648  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 707

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 708  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 767

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 768  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 814

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 815  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 840

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 841  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 888

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 889  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 946

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 947  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1006

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK K+
Sbjct: 1007 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRKI 1042


>gi|402880149|ref|XP_003903675.1| PREDICTED: DNA excision repair protein ERCC-6 [Papio anubis]
          Length = 1494

 Score =  266 bits (680), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 298/636 (46%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 495  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 544

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 545  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 600

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 601  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 646

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 647  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 706

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 707  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 766

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 767  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 813

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 814  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 839

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 840  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 887

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 888  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 945

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 946  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1005

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK K+
Sbjct: 1006 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRKI 1041


>gi|308198272|ref|XP_001386950.2| protein required for X-ray damage repair, mitotic recombination, and
            full meiotic recombination. mRNA increases in meiosis
            [Scheffersomyces stipitis CBS 6054]
 gi|149388940|gb|EAZ62927.2| protein required for X-ray damage repair, mitotic recombination, and
            full meiotic recombination. mRNA increases in meiosis
            [Scheffersomyces stipitis CBS 6054]
          Length = 821

 Score =  266 bits (680), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 196/616 (31%), Positives = 304/616 (49%), Gaps = 102/616 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   ++  L+ HQ+ G++F++      I       +  GCI+A  MGLGKT Q IA +
Sbjct: 222  VVIDPKLAKILRPHQIAGVKFLYRCTAGLIDA-----RAKGCIMADEMGLGKTLQCIALM 276

Query: 774  YTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRAE 829
            +T ++    G RT    +IV P +++ NW  E +KW     L PL V    D    + +E
Sbjct: 277  WTLLKQSPRGKRTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAV----DGKSTKNSE 332

Query: 830  L---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 880
            L   L +W    G      V +I Y   R     ++V D+    E+         +++ D
Sbjct: 333  LGGALQQWSVARGRNIVRPVLIISYETLR-----RNV-DKLAGTEV--------GLMLAD 378

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H +KN  + T  AL  ++C+RR+ L+G+P+QN+L EY+ +++F   G+LG+ ++F+  
Sbjct: 379  EGHRLKNGDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFKKN 438

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKL 1000
            F+N I  G+   +T ++ ++ +++   L + +  F+ R   +++ K LP K  +V+   L
Sbjct: 439  FENKILKGRDAIATDKEREVGDEKLAELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGL 498

Query: 1001 SPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-FAGYQALAQIW------NHPGILQLTKD 1053
            SP+Q+ LY+ F          +++ +I+K     G Q L  I       NHP +L L   
Sbjct: 499  SPMQKDLYRHF----------ITSPEIKKLLKGVGSQPLKAIGMLKKLCNHPDLLNLP-- 546

Query: 1054 KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE 1113
                  +D E S      DY   IG   RN               + W            
Sbjct: 547  ------DDFEGSEKFIPEDYCSSIGSGGRNRE------------VQSW------------ 576

Query: 1114 LDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
              YSGK ++L   L    S   DK ++ S    TLDLIE    ++ R  K G L      
Sbjct: 577  --YSGKFMILERFLYQIRSQTNDKIVLISNYTQTLDLIE----RMCRHKKYGSL------ 624

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
              RLDG    ++RQKLV++FN+P        L+S++AG  GINL  ANR+I++D  WNP 
Sbjct: 625  --RLDGTLSINKRQKLVDKFNDPEGNEF-IFLLSSKAGGCGINLIGANRLILMDPDWNPA 681

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISK 1291
             D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K  L++ VVD ++ V R  S 
Sbjct: 682  ADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSA 741

Query: 1292 EEMLHLFEFGDDENPD 1307
            + +  LF +  D N D
Sbjct: 742  DNLRQLFMYQPDTNCD 757


>gi|45382655|ref|NP_990041.1| DNA repair and recombination protein RAD54B [Gallus gallus]
 gi|51316526|sp|Q9DG67.1|RA54B_CHICK RecName: Full=DNA repair and recombination protein RAD54B; AltName:
            Full=RAD54 homolog B
 gi|9957289|gb|AAG09308.1|AF178529_1 Rad54b [Gallus gallus]
          Length = 918

 Score =  266 bits (680), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 194/596 (32%), Positives = 301/596 (50%), Gaps = 77/596 (12%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            I+  L+ HQ  GI F++E ++  +R   SG    G ILA  MGLGKT Q I+ ++T +R 
Sbjct: 299  IANNLRPHQREGIVFLYECVM-GMRV--SGR--FGAILADEMGLGKTLQCISLVWTLLRQ 353

Query: 780  VNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWR 835
               G    L+ ALIVTP +++ NWK+EF KW  SE   ++VF    V +D + E      
Sbjct: 354  GVYGCKPVLKRALIVTPGSLVKNWKKEFQKWLGSER--IKVF---TVDQDHKVEEFIS-S 407

Query: 836  AKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
                V +I Y    R+L       D+  A E         ++L+CDE H +KN+   TT 
Sbjct: 408  PLYSVMIISYEMLLRSL-------DQIQAIEF--------NLLICDEGHRLKNSSIKTTT 452

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            AL  + C+RRI LTG+P+QN+L E+Y +++FV  G LGS   +R  ++ PI   +  ++T
Sbjct: 453  ALTNLSCERRIILTGTPIQNDLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSAT 512

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD- 1013
             E+  +  +R+  L      F+ R    V+ K LPPK   +I  + + LQ  LY++ L  
Sbjct: 513  KEEKDLGEKRAAELTRLTGLFILRRTQEVINKFLPPKKENIIFCQPTALQLELYRKLLSS 572

Query: 1014 --LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
              +      R+ N            AL ++ NHP +L          +E   D  SDE++
Sbjct: 573  RVISSCLQGRLENS----PHLICIGALKKLCNHPCLL------FKALKEKCCDPKSDEHV 622

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 1131
            +            +   +G  D   F +D+ +D     T+ E+D SGK+ +L+ +L    
Sbjct: 623  E------------SSLYEGLTD--VFPQDYTSD-----TFSEID-SGKLQVLVKLLAAIR 662

Query: 1132 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 1191
             +     V         L+  Y   L    +  K +  G  + RLDG T  S+RQ++V+ 
Sbjct: 663  ELSSSERVV--------LVSNYTQTLNVLLETCKCY--GYSYTRLDGNTPVSQRQQIVDS 712

Query: 1192 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1251
            FN   +      L+S++AG +G+NL  A+ +I+ D  WNP  D+QA+ R WR GQ   V 
Sbjct: 713  FNSKFSPAF-IFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKCTVH 771

Query: 1252 AYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEFGDDEN 1305
             YRL+  GT+EEKIY+RQ++K+ L+  VVD  +   H   S EE+ +LF   ++ +
Sbjct: 772  IYRLLTTGTIEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSVEELRNLFTLHENSS 827


>gi|117558161|gb|AAI27105.1| Excision repair cross-complementing rodent repair deficiency,
            complementation group 6 [Homo sapiens]
          Length = 1493

 Score =  266 bits (679), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 195/637 (30%), Positives = 298/637 (46%), Gaps = 103/637 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 494  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 543

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 544  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 599

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 600  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 645

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ     RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 646  DEGHKIRNPNAAVTLACKQFCTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 705

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 706  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 765

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 766  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 812

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 813  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 838

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 839  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 886

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 887  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 944

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 945  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1004

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKLP 1333
            F     +        +   G GS  Q   C LK ++P
Sbjct: 1005 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRRIP 1041


>gi|345780848|ref|XP_532592.3| PREDICTED: DNA repair and recombination protein RAD54-like [Canis
            lupus familiaris]
          Length = 747

 Score =  266 bits (679), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 189/607 (31%), Positives = 294/607 (48%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLIWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGVRVPSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +    L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLK-QAKPAEELREGKMTVSSLSSITLLKKLCNHPALI-------- 463

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E             +DGF          +     E   
Sbjct: 464  ----------------YDKCVEE-------------EDGFEGALEIFPPTYSAKALEPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN PL+      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNNPLSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 661  LKELFTL 667


>gi|118383249|ref|XP_001024779.1| SNF2 family N-terminal domain containing protein [Tetrahymena
            thermophila]
 gi|89306546|gb|EAS04534.1| SNF2 family N-terminal domain containing protein [Tetrahymena
            thermophila SB210]
          Length = 1046

 Score =  266 bits (679), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 178/597 (29%), Positives = 300/597 (50%), Gaps = 80/597 (13%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   ++  ++ HQ +G++FM+E     I  ++  D G GCILA +MGLGKT Q IA +
Sbjct: 304  VYIDVYLNNSMRIHQRLGVKFMFE----CISGLRGPDIG-GCILADSMGLGKTLQTIALI 358

Query: 774  YTAMR-----SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 828
            +T +R       +  +R  ++V PV++L +W +E  KW        ++ + +  +  R  
Sbjct: 359  WTLIRRNPHSGTSPLIRKVVVVAPVSLLGSWNKEVKKWLGDARLIPKIALGKRETVIRIC 418

Query: 829  ELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
            +  A   AK  + LI Y  FR      HV            L +  D+L+ DE H +KN 
Sbjct: 419  KEFASSSAK--MLLISYEQFR-----MHV----------ETLSNACDLLIFDEGHRLKNM 461

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               T ++   +KC RRI LTG+PLQN+L E+Y  V FV      +  +F+  F +PI   
Sbjct: 462  NIKTFRSFNSIKCNRRIILTGTPLQNSLDEFYSCVKFVNPNIFENEKQFKFVFSDPILAA 521

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
              ++++++ V+    RS  L   +  FV R   ++++K LPP++ + I +KL+P Q  LY
Sbjct: 522  LKSDASADAVEKAAVRSKELTHIISRFVLRRKADILEKLLPPRSEYFIFLKLTPFQNMLY 581

Query: 1009 KRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSD 1068
            K+ +      ++  + E      F     + ++ NHP ++            D  + +S 
Sbjct: 582  KKMIQARYNKSELDTGE----GAFGLLTIMRKLLNHPQLI----------YTDVGNQTSQ 627

Query: 1069 ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT 1128
            E   Y             F Q       +Q D W     E ++K   +   ++  +  + 
Sbjct: 628  EFKQY-------------FPQD------YQLDDW-----EASFK-FKFISDLLDQMRQIE 662

Query: 1129 MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
            +     ++ ++ S    TLD+++  +             +K   + RLDG   + +RQ+L
Sbjct: 663  IAQKSTERIIIVSYWTQTLDVLQIMIK------------QKNLKFVRLDGSVNAQKRQEL 710

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            ++RF +P N  +K  L+   AG  G+NL +ANR+++++ +WNP+ DLQ + R WR GQTK
Sbjct: 711  IDRFQDPTND-IKVFLLCGSAGGTGLNLSAANRMVLMEANWNPSNDLQVMGRIWRDGQTK 769

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF-GDDE 1304
            PV  YRL+A GTMEEK+ +RQ  KE L+  VVD + + +  + +++  LFEF GD++
Sbjct: 770  PVHIYRLVACGTMEEKVLQRQFLKEDLSQNVVDEKMIVKQYNNDKLKQLFEFKGDNQ 826


>gi|190348945|gb|EDK41499.2| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC 6260]
          Length = 814

 Score =  265 bits (678), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 199/616 (32%), Positives = 308/616 (50%), Gaps = 112/616 (18%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAHTMGLGKTFQV 769
             V I   ++  L+ HQV G++F++        +  SG    +  GCI+A  MGLGKT Q 
Sbjct: 218  PVVIDPRLAKVLRPHQVAGVKFLY--------RCTSGLMDPRAKGCIMADEMGLGKTLQC 269

Query: 770  IAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRD 825
            IA ++T +R    G +T    +IV P +++ NW  E +KW     L PL V    D    
Sbjct: 270  IALMWTLLRQGPRGTKTISKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAV----DGKST 325

Query: 826  RRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI 876
            + A+L   L +W    G      V +I Y   R     ++V D+    E+         +
Sbjct: 326  KSADLGPALQQWSVASGRNIVRPVLIISYETLR-----RNV-DKLAGTEV--------GL 371

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++ DE H +KN  + T  AL  ++C+RR+ L+G+P+QN+L EY+ +++F   G+LG+ ++
Sbjct: 372  MLADEGHRLKNGDSLTFTALNALRCERRVILSGTPIQNDLSEYFSLLNFSNPGYLGTRND 431

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            FR  F+N I  G+  ++T ++ +I +Q+   L + +  F+ R   +++ K LP K  +V+
Sbjct: 432  FRKNFENAILRGRDADATDKEKEIGDQKLSDLSKLVSKFIIRRTNDILSKYLPIKYEYVV 491

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-FAGYQALAQIW------NHPGILQ 1049
             VKLSPLQ+ LYK FL          ++ ++RK    AG Q L  I        HP +L+
Sbjct: 492  FVKLSPLQKALYKHFL----------TSPEVRKLLKGAGSQPLKAIGMLKKLCTHPELLR 541

Query: 1050 LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEH 1109
            L            E+ S  E++             +D+     D     + W        
Sbjct: 542  L-----------PEEVSGSEDI-----------LPDDYESSGRDKEI--RTW-------- 569

Query: 1110 TYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK 1168
                  YSGK  +L   L  + +   DK ++ S    TLDLIE    ++ R         
Sbjct: 570  ------YSGKFAMLERFLHQIRTETDDKIVLISNYTQTLDLIE----RMCR--------Y 611

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            K     RLDG    ++RQKLV+RFN+P  +     L+S++AG  GINL  ANR+I++D  
Sbjct: 612  KRYQCCRLDGTMNINKRQKLVDRFNDPEGQEF-IFLLSSKAGGCGINLIGANRLILLDPD 670

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHR 1287
            WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K  L++ VVD ++ V R
Sbjct: 671  WNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVDR 730

Query: 1288 TISKEEMLHLFEFGDD 1303
              S + +  LF+F  D
Sbjct: 731  LFSADLLRQLFQFQPD 746


>gi|146413212|ref|XP_001482577.1| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC 6260]
          Length = 814

 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 198/616 (32%), Positives = 307/616 (49%), Gaps = 112/616 (18%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAHTMGLGKTFQV 769
             V I   ++  L+ HQV G++F++        +  SG    +  GCI+A  MGLGKT Q 
Sbjct: 218  PVVIDPRLAKVLRPHQVAGVKFLY--------RCTSGLMDPRAKGCIMADEMGLGKTLQC 269

Query: 770  IAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRD 825
            IA ++T +R    G +T    +IV P +++ NW  E +KW     L PL V    D    
Sbjct: 270  IALMWTLLRQGPRGTKTISKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAV----DGKST 325

Query: 826  RRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI 876
            + A+L   L +W    G      V +I Y   R     ++V D+    E+         +
Sbjct: 326  KSADLGPALQQWSVASGRNIVRPVLIISYETLR-----RNV-DKLAGTEV--------GL 371

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++ DE H +KN  + T  AL  ++C+RR+ L+G+P+QN+L EY+ +++F   G+LG+ ++
Sbjct: 372  MLADEGHRLKNGDSLTFTALNALRCERRVILSGTPIQNDLSEYFSLLNFSNPGYLGTRND 431

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            FR  F+N I  G+  ++T ++ +I +Q+   L + +  F+ R   +++ K LP K  +V+
Sbjct: 432  FRKNFENAILRGRDADATDKEKEIGDQKLSDLSKLVSKFIIRRTNDILSKYLPIKYEYVV 491

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-FAGYQALAQIW------NHPGILQ 1049
             VKLSPLQ+ LYK FL          ++ ++RK    AG Q L  I        HP +L+
Sbjct: 492  FVKLSPLQKALYKHFL----------TSPEVRKLLKGAGSQPLKAIGMLKKLCTHPELLR 541

Query: 1050 LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEH 1109
            L ++                      V+G +    +D+     D     + W        
Sbjct: 542  LPEE----------------------VLGSEDILPDDYESSGRDKEI--RTW-------- 569

Query: 1110 TYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK 1168
                  YSGK  +L   L  + +   DK ++ S    TLDLIE    ++ R         
Sbjct: 570  ------YSGKFAMLERFLHQIRTETDDKIVLISNYTQTLDLIE----RMCR--------Y 611

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            K     RLDG    ++RQKLV+RFN+P  +     L+S++AG  GINL  ANR+I++D  
Sbjct: 612  KRYQCCRLDGTMNINKRQKLVDRFNDPEGQEF-IFLLSSKAGGCGINLIGANRLILLDPD 670

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHR 1287
            WNP  D QA+ R WR GQ K  F YR +  GT+EEKI++RQ  K  L++ VVD ++ V R
Sbjct: 671  WNPAADQQALARVWRDGQKKDCFIYRFILTGTIEEKIFQRQSMKLSLSSCVVDEKEDVDR 730

Query: 1288 TISKEEMLHLFEFGDD 1303
              S + +  LF+F  D
Sbjct: 731  LFSADLLRQLFQFQPD 746


>gi|380796601|gb|AFE70176.1| DNA excision repair protein ERCC-6, partial [Macaca mulatta]
          Length = 1101

 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 298/636 (46%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 102  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 151

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 152  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 207

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 208  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 253

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 254  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 313

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 314  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 373

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 374  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 420

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 421  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 446

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 447  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 494

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 495  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 552

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 553  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 612

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK K+
Sbjct: 613  FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRKI 648


>gi|255072671|ref|XP_002500010.1| SNF2 super family [Micromonas sp. RCC299]
 gi|226515272|gb|ACO61268.1| SNF2 super family [Micromonas sp. RCC299]
          Length = 800

 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 188/566 (33%), Positives = 288/566 (50%), Gaps = 66/566 (11%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            I   L+ HQ  G+RFM+E ++   R   SG    GC+LAH MG+GKT QVIA L+T ++ 
Sbjct: 288  IGRHLRPHQRDGVRFMYECVVGLRRGGASGSIHKGCLLAHEMGMGKTLQVIALLWTLLKQ 347

Query: 780  VNLG----LRTALIVTPVNVLHNWKQEFMKW-RPSELKPLRVFMLEDVSRDRRAELLAKW 834
              +     +R A+I  P +++ NW  E  KW   + L+PL V   E     ++ E  A  
Sbjct: 348  GPIAGKPVVRKAVIACPASLVGNWGGEIKKWLNDTRLEPLLVEGGEGADGKQKFEDWALP 407

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT-- 892
              +    L+  T++  L        R+ A+ +  A   G D+LVCDEAH +KNT+ DT  
Sbjct: 408  NQRRHCVLV--TSYETL--------RSHAKTVQKA-TGGIDLLVCDEAHRLKNTKGDTQT 456

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
              AL+ ++C RR+ LTG+P+QN+L E++ ++DF   G LG +  F+  F  P+E  +  +
Sbjct: 457  IAALRALRCDRRVLLTGTPIQNDLGEFFAVMDFACPGLLGDASVFKKVFSTPVEASRDKH 516

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDM-NVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
            +T+E+ +I   RS  L    + FV R    +V  K LPPKT +V+ V+ SP+Q  LY+  
Sbjct: 517  ATAEEKRIGAARSAELGRMTREFVHRASARDVNAKHLPPKTEYVVFVRPSPVQAALYRAV 576

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
            L        R  ++ +R       Q L ++ N   +L   + +G    +    S SD   
Sbjct: 577  LR----RGARDGSQPLR-----ALQQLQRLCNSASLLMRARGEGEEGEDVGGGSLSD--- 624

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 1131
                            L  K  +G+   D  +  +  H   +   SGK+ +L+ +L    
Sbjct: 625  ----------------LSSKVPEGY--PDPSDPRVPAH---DEAMSGKLAVLIRMLQGMR 663

Query: 1132 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 1191
               DK+++ S    TLD+I            +  L   GK   RLDG    ++R  LV  
Sbjct: 664  RGIDKTVIVSGYTSTLDIIA-----------EACLVMGGK-VSRLDGSVPPNQRVPLVNS 711

Query: 1192 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1251
            FN    +     L+ST+AG +G+NL  ANR+++ D  WNP  DLQA+ R WR GQ +PV 
Sbjct: 712  FNA--GRGGDVFLLSTKAGGVGLNLVGANRLVLFDSDWNPANDLQALARVWRDGQKRPVT 769

Query: 1252 AYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             YRL++ GT+EEKI++RQ+ K  +A+
Sbjct: 770  IYRLVSTGTVEEKIFQRQMLKGDVAS 795


>gi|340370196|ref|XP_003383632.1| PREDICTED: transcriptional regulator ATRX-like [Amphimedon
            queenslandica]
          Length = 1915

 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/464 (33%), Positives = 252/464 (54%), Gaps = 46/464 (9%)

Query: 595  ELGRAMGSENLIVSSSESDSENSDADNNLKIGGKRKQKKKIRRILDDAELGEETKRKIAI 654
            E+G     E    S S ++ E S +   +K        KK R+++   +L  ETK     
Sbjct: 988  EVGGVRRKETTPTSKSSNEEEASASTTPVKT-------KKTRKLISKDKLAFETKEAQKA 1040

Query: 655  EKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAV 714
            EKER +RLK                  D        + +  DA T  ++  VR       
Sbjct: 1041 EKERLDRLKKKN---------------DAQAVQNERLILEKDAETDEVLLEVR------- 1078

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
               SS+ + +  HQ  GI+F++  + + ++++KS + G G ILAH MGLGKTFQVIAF+ 
Sbjct: 1079 ---SSLVSHILPHQAKGIKFLYNCVCEDLKRLKS-EPGSGAILAHCMGLGKTFQVIAFID 1134

Query: 775  TAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK 833
              +  S +  ++  +++ PVN L+NW  E+ KW     +  RV +++    ++R  ++ +
Sbjct: 1135 CLISNSESTNIKRVIVLCPVNTLNNWNDEWNKWISLSRRDYRVTVVDAKLNNQRLMIIER 1194

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADT 892
            W   GGV L+GY  FRNL+ G  ++   +       L D GPDI++CDE H+++   ++ 
Sbjct: 1195 WFKCGGVALMGYEMFRNLASGSKIRKAKLRESFSKYLLDPGPDIMICDEGHVLRRESSNL 1254

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
            +  + +V  +RRI LTG+PLQNNL EYY MV+FV+   LG+  EF N+F NPI NGQ  +
Sbjct: 1255 SVIVSRVATKRRIVLTGTPLQNNLKEYYTMVNFVKPNLLGTMKEFCNQFANPIANGQCAD 1314

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            S+   V++M  R+H+L++ L G V R D  ++ + LPPK  +V++++++P+Q  L  R+L
Sbjct: 1315 SSPYQVRVMKYRAHVLFQTLSGCVDRKDYRILAESLPPKYEYVVSIRMTPVQSELITRYL 1374

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGYQALA--QIWNHPGILQLTKDK 1054
               G T    S+       F+ + +LA  ++W+HP +L L +++
Sbjct: 1375 ---GRTFHTASD------LFSTFASLAKYKVWSHPWVLMLDQER 1409



 Score =  194 bits (494), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/207 (46%), Positives = 141/207 (68%), Gaps = 8/207 (3%)

Query: 1101 WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
            W+ DLL +    ++D SGK++ LL++L     + +K LVFSQS+  LD IE+ L      
Sbjct: 1490 WFEDLLSDEAEDDIDSSGKVLFLLELLEETKKVHEKVLVFSQSLLLLDQIEYLL------ 1543

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
              Q + + +G D++RLDG T++S R +L+++FN   N+ ++  LIST+AGSLG+NL  AN
Sbjct: 1544 --QKRDFFEGIDYFRLDGSTKASHRTELMKKFNRKNNETIRLFLISTKAGSLGVNLIGAN 1601

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            RV++ D  WNPT+DLQ+++R +R+GQTKPVF YRL+A GTMEEKIY RQVTK  L+ RV+
Sbjct: 1602 RVVVFDACWNPTHDLQSVFRTYRFGQTKPVFVYRLLAQGTMEEKIYDRQVTKTSLSLRVI 1661

Query: 1281 DRQQVHRTISKEEMLHLFEFGDDENPD 1307
            D +QV R  +  ++  LF F     P+
Sbjct: 1662 DEKQVGRHYTNNQLQELFTFTPAPPPE 1688



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 50/115 (43%), Gaps = 14/115 (12%)

Query: 487 LSEKFYCTAC----NNVAIEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGR 542
           L + F C +C    N     VH H ILNV+ C  C       +   D D SE YC  CG 
Sbjct: 321 LPDTFPCVSCQKQINWKEERVHTHKILNVLTCLKCFQTFNTGVFEVDKDGSENYCTLCGD 380

Query: 543 SSDLVSCKS-CKTLFCTTCVKRNISEACLSDEVQA-----SCWQCCCCSPSLLKR 591
             +L  C + C   FC TC    I   C S+ V+      S W C  C PS LK+
Sbjct: 381 GGELFVCDNDCPKSFCQTC----ILNVCGSEAVEKLKSPDSNWICFVCDPSPLKK 431


>gi|195435389|ref|XP_002065674.1| GK15573 [Drosophila willistoni]
 gi|292630875|sp|B4MX21.1|RAD54_DROWI RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=Protein okra
 gi|194161759|gb|EDW76660.1| GK15573 [Drosophila willistoni]
          Length = 784

 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 188/606 (31%), Positives = 303/606 (50%), Gaps = 111/606 (18%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM++ +         G KG   GCI+A  MGLGKT Q +  ++T +
Sbjct: 149  LSNILRPHQREGVRFMYDCV--------EGKKGNFNGCIMADEMGLGKTLQCVTLVWTLL 200

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
            R        +  A+IV+P +++ NW++EF KW    +  L    +E  S++   + L ++
Sbjct: 201  RQSCECKPTITKAIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTIKALEQF 257

Query: 835  ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
                  R    V LI Y  FR             A  +C   Q+   +++CDE H +KN+
Sbjct: 258  SMNTSTRLGTPVLLISYETFRI-----------YANILC---QNEVGMVICDEGHRLKNS 303

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               T QAL  +K +RR+ L+G+P+QN+L EY+ +V+FV    LG++ +F+  F+NPI  G
Sbjct: 304  DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENPILKG 363

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            Q+T+S+ ++ +   +++  L   +   + R    ++ K LP K   VI V+L+ +Q   Y
Sbjct: 364  QNTDSSDKERERALEKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVICVRLTSVQLEFY 423

Query: 1009 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 1059
              FL      +D+V       NEK   +  A    L ++ +HP ++    L +DKG+   
Sbjct: 424  TNFLK-----SDKVRRSLADCNEKASLTALADITTLKKLCSHPDLIYEKMLARDKGF--- 475

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
                     EN    +    KP+++N  L GK                            
Sbjct: 476  ---------ENSQNILPTNYKPKDLNPELSGK---------------------------- 498

Query: 1120 MVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
              +LLD +  T+ +N  DK ++ S    TLDL E    +L R        K+   + RLD
Sbjct: 499  -FMLLDFMLATIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYTFVRLD 545

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            G     +R K+V+RFN+P N    C L  +S++AG  G+NL  ANR+ + D  WNP  D 
Sbjct: 546  GTMTIKKRSKVVDRFNDPEN---DCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 602

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEM 1294
            QA+ R WR GQ KP + YRL+A G++EEKI +RQ  K+ L++ ++D  +   +  +++++
Sbjct: 603  QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDL 662

Query: 1295 LHLFEF 1300
              LF F
Sbjct: 663  KDLFSF 668


>gi|119613505|gb|EAW93099.1| hCG32740, isoform CRA_e [Homo sapiens]
          Length = 1356

 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 194/636 (30%), Positives = 298/636 (46%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 494  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 543

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 544  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 599

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 600  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 645

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 646  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 705

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 706  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 765

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 766  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 812

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 813  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 838

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 839  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 886

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 887  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 944

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 945  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1004

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK ++
Sbjct: 1005 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRRI 1040


>gi|426364707|ref|XP_004049439.1| PREDICTED: piggyBac transposable element-derived protein 3-like
            isoform 1 [Gorilla gorilla gorilla]
          Length = 1493

 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 194/636 (30%), Positives = 298/636 (46%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 494  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 543

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 544  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 599

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 600  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 645

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 646  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 705

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 706  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 765

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 766  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 812

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 813  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 838

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 839  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYSYLKMD 886

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 887  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 944

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 945  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1004

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK ++
Sbjct: 1005 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRRI 1040


>gi|397475294|ref|XP_003809078.1| PREDICTED: DNA excision repair protein ERCC-6 [Pan paniscus]
          Length = 1491

 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 191/636 (30%), Positives = 297/636 (46%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 492  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 541

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 542  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 597

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                  ++ +L+       G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 598  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 643

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 644  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 703

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 704  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 763

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 764  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 810

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 811  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 836

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 837  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 884

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 885  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 942

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 943  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1002

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK ++
Sbjct: 1003 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRRI 1038


>gi|4557565|ref|NP_000115.1| DNA excision repair protein ERCC-6 [Homo sapiens]
 gi|416959|sp|Q03468.1|ERCC6_HUMAN RecName: Full=DNA excision repair protein ERCC-6; AltName:
            Full=ATP-dependent helicase ERCC6; AltName: Full=Cockayne
            syndrome protein CSB
 gi|182181|gb|AAA52397.1| excision repair protein [Homo sapiens]
 gi|27501924|gb|AAO13487.1| excision repair cross-complementing rodent repair deficiency,
            complementation group 6 [Homo sapiens]
 gi|119613500|gb|EAW93094.1| hCG32740, isoform CRA_a [Homo sapiens]
 gi|119613503|gb|EAW93097.1| hCG32740, isoform CRA_a [Homo sapiens]
          Length = 1493

 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 194/636 (30%), Positives = 298/636 (46%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 494  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 543

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 544  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 599

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 600  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 645

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 646  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 705

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 706  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 765

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +          
Sbjct: 766  CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 812

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N    L+G  DD           L E  +     S
Sbjct: 813  --------------------SGGPKN----LKGLPDDE----------LEEDQFGYWKRS 838

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 839  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 886

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRV+I D  WNP+ D QA
Sbjct: 887  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 944

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 945  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1004

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q   C LK ++
Sbjct: 1005 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRRI 1040


>gi|281351942|gb|EFB27526.1| hypothetical protein PANDA_008144 [Ailuropoda melanoleuca]
          Length = 716

 Score =  265 bits (677), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 297/607 (48%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R+V       GCI+A  MGLGKT
Sbjct: 106  KEKLPVHVVVDPVLSKVLRPHQREGVKFLWECVTS--RRVPGSH---GCIMADEMGLGKT 160

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 161  LQCITLMWTLLRQSPECRPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 217

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 218  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 262

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 263  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHE 322

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 323  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 382

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +    L ++ NHP ++        
Sbjct: 383  CCRLTPLQTELYKRFLR-QAKPAEELREGKMSVSSLSSITLLKKLCNHPALI-------- 433

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D  +G  +   F   + +  L      E   
Sbjct: 434  ----------------YDKCVEEE-----DGFEGALE--IFPPGYSSKAL------EPQL 464

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 465  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 511

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN PL+      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 512  RLDGTMSIKKRAKVVERFNNPLSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 570

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +  V R  S  E
Sbjct: 571  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEPDVERHFSLGE 630

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 631  LKELFTL 637


>gi|170041242|ref|XP_001848380.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
 gi|167864826|gb|EDS28209.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
          Length = 787

 Score =  265 bits (677), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 203/649 (31%), Positives = 318/649 (48%), Gaps = 101/649 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKG--LGCILAHTMGLGKTFQVIAFLYTAMRS-- 779
            L+ HQ  G+RFM+E +        +G +G   GCI+A  MGLGKT Q I  L+T +R   
Sbjct: 139  LRPHQREGVRFMYECV--------TGKRGDFQGCIMADEMGLGKTLQCITLLWTLLRQSP 190

Query: 780  -VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV-FMLEDVSRDRRAELLAKWRAK 837
                 +  A+IV P +++ NW +EF KW    +  L +    ++ +  +  + +A   A+
Sbjct: 191  DCKPEINKAVIVCPSSLVKNWYKEFGKWLGCRVNCLSIDGGSKEQTTKQLEQFMANQSAR 250

Query: 838  GG--VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQA 895
             G  V +I Y  FR            +   I +  + G   ++CDE H +KN    T QA
Sbjct: 251  QGTPVLIISYETFR------------LYAGILNNSEVG--AVLCDEGHRLKNCENLTYQA 296

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            L  +K +RR+ L+G+P+QN+L EYY ++ FV  G LGSS+EFR +F+NPI  GQ  NST 
Sbjct: 297  LMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSSNEFRRQFENPILRGQDANSTE 356

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
             + +   +R   L   +   + R   +++ K LP K   V+ VK++ +Q  LYK FL   
Sbjct: 357  SEREKATERLQELSALVNRCMIRRTSSLLTKYLPIKFEMVVCVKMTDVQTELYKSFLQSD 416

Query: 1016 GFTNDRVSNEKIRKSFFA--GYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
                  +   +++ S  A     AL ++ NHP    L  +K    +E AE          
Sbjct: 417  SIRRSVLEKSEVKASLTALSNITALKKLCNHP---DLVYEK---IKERAE---------- 460

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLDIL-TMC 1130
                                 GF  ++ +  L   ++ KE+  ++ GK+++L  +L ++ 
Sbjct: 461  ---------------------GF--EEAYKILPANYSAKEVRPEFGGKLMVLDCMLASIK 497

Query: 1131 SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVE 1190
             N  DK ++ S    TLDL E    KL R        K+G  + RLDG     +R K+V+
Sbjct: 498  MNTNDKIVLVSNYTQTLDLFE----KLCR--------KRGYGYVRLDGTMTIKKRGKVVD 545

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
             FN+P +K     ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ KP 
Sbjct: 546  EFNKPDSKEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKPC 604

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPDPL 1309
            F YRL+A G++EEKI++RQ  K+ L+  VVD  +   R  +++++  LF   +       
Sbjct: 605  FIYRLLATGSIEEKIFQRQTHKKALSNTVVDNDEDGQRHFTQDDLKDLFRLDE------- 657

Query: 1310 TAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMESLLGKHHPRCAVN 1358
              +S  +     +    A++ KLP     C+  L       H   CA N
Sbjct: 658  ATISDTHSIFKCKRCVNAIQVKLPPEDSDCTSDL------AHWYHCANN 700


>gi|358385618|gb|EHK23214.1| hypothetical protein TRIVIDRAFT_220490 [Trichoderma virens Gv29-8]
          Length = 802

 Score =  265 bits (677), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 195/625 (31%), Positives = 303/625 (48%), Gaps = 93/625 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAK----LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++  E+  ++P  I  K    L+ HQ+ G++FM++ +   +      +K  GCI+
Sbjct: 187  ILGIKKQVEEDHPKVPVVIDPKIAKCLRPHQIEGVKFMYKCVTGQV-----DEKAHGCIM 241

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q I  ++T ++ S N G   ++ A++V P +++ NW  E  KW  P+ + 
Sbjct: 242  ADEMGLGKTLQCITLMWTLLKQSPNAGKSTIQKAIVVCPASLVKNWANELTKWLGPNAIN 301

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      E++ R  R   +A  R+    V ++ Y   R N+   KH K         
Sbjct: 302  PFAIDGKAPKEEMKRQLRQWAIASGRSITRPVIIVSYETLRVNVEELKHTKV-------- 353

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
                    +L CDE H +KN  + T  AL  +   RR+ LTG+P+QN+L EY+ + +F  
Sbjct: 354  -------GLLFCDEGHRLKNADSTTFSALNDLNVTRRVILTGTPIQNDLTEYFALTNFAN 406

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS  EFR RF+ PI  G+  N++  + +  ++ +  L   +  F+ R   +++ K 
Sbjct: 407  PDLLGSRLEFRKRFEIPILRGRDANASEHERQRGDECTGELLGIVNRFLIRRTNDLLSKY 466

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   L+P Q  LY  F+   ++      + S              L ++ NH
Sbjct: 467  LPVKYEHVVFCNLAPFQIDLYNYFITSPNIQALLRGKGSQP------LKAINILKKLCNH 520

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L L+ D     +   ED    E                   +G++ D    K W   
Sbjct: 521  PDLLNLSDDLPGSEKCFPEDYVPKEA------------------RGRDRD---IKPW--- 556

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM +L  +L  +  +  DK ++ S    TLDL E    +L R  + 
Sbjct: 557  -----------YSGKMQVLDRMLAKIREDTNDKIVLISNYTSTLDLFE----RLCRERQY 601

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    ++RQKLV+RFN+P N      L+S++AG  GINL  ANR++
Sbjct: 602  GSL--------RLDGTMTVNKRQKLVDRFNDP-NGDEFIFLLSSKAGGCGINLIGANRLV 652

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQTK  F YR +A GT+EEKI++RQ  K+ L++ VVD  
Sbjct: 653  LFDPDWNPAADQQALARVWRDGQTKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSA 712

Query: 1283 QQVHRTISKEEMLHLFEFGDDENPD 1307
            + V R  S + +  LF++  D   D
Sbjct: 713  EDVERHFSLDSLRELFQYRPDTTSD 737


>gi|224046507|ref|XP_002200063.1| PREDICTED: DNA repair and recombination protein RAD54B [Taeniopygia
            guttata]
          Length = 919

 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 194/598 (32%), Positives = 300/598 (50%), Gaps = 81/598 (13%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            I+  L+ HQ  GI F++E ++  +R   SG    G ILA  MGLGKT Q IA ++T +R 
Sbjct: 298  IANNLRPHQKEGIIFLYECVM-GMRV--SGR--FGAILADEMGLGKTLQCIALVWTLLRQ 352

Query: 780  VNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWR 835
               G    L+ AL+VTP +++ NWK+EF KW  +E   ++VF    V +D + E      
Sbjct: 353  GPYGCKPVLKRALVVTPGSLVKNWKKEFQKWLGNER--IKVFA---VDQDHKVEEFIS-S 406

Query: 836  AKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQA 895
                V +I Y      S      D+  A E         ++L+CDE H +KN+   TT A
Sbjct: 407  PLYSVMIISYEMLLRSS------DQIEAVEF--------NLLICDEGHRLKNSTIKTTTA 452

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            L  + C+RRI LTG+P+QN+L E+Y +++FV  G LGS   +R  ++ PI   +  ++T 
Sbjct: 453  LTSLSCERRIILTGTPIQNDLQEFYALIEFVNPGILGSLSTYRKIYEEPIVRSREPSATE 512

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
            E+ ++  +R+  L      F+ R    V+ K LPPK   +I  + + LQ  LY++ L   
Sbjct: 513  EEKELGEKRAAELTRLTGLFILRRTQEVINKFLPPKKESIIFCRPTALQLELYRKLLGSR 572

Query: 1016 GFTN---DRVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDKGYPSREDAEDSSSDENM 1071
              T+    R+ N            AL ++ NHP +L +  K+K      D      DE+ 
Sbjct: 573  VITSCLQGRLENS----PHLICIGALKKLCNHPCLLFKAIKEKSC----DPMSEEYDESS 624

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 1131
             Y  VI                   F +D+ +D     T+ E D SGK+ +L+ +L    
Sbjct: 625  LYEGVI-----------------DVFPQDYTSD-----TFCETD-SGKLQVLVKLLAAIH 661

Query: 1132 --NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
              N  ++ ++ S    TL+++            Q      G  + RLDG T  S+RQ +V
Sbjct: 662  ELNSSERVVLVSNYTQTLNVL------------QDVCKHYGYSYTRLDGHTPVSQRQHIV 709

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            + FN   +      L+S++AG +G+NL  A+ +I+ D  WNP  D+QA+ R WR GQ   
Sbjct: 710  DTFNSKFSPAF-IFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHS 768

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEFGDDEN 1305
            V  YRL+  G++EEKIY+RQ++K+ L+  VVD  +   H   S EE+ +LF   +D +
Sbjct: 769  VHIYRLLTTGSIEEKIYQRQISKQDLSGAVVDLSKTSEHTHFSIEELKNLFTLHEDSS 826


>gi|426255946|ref|XP_004021608.1| PREDICTED: DNA excision repair protein ERCC-6 [Ovis aries]
          Length = 1481

 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 194/636 (30%), Positives = 302/636 (47%), Gaps = 103/636 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 484  DEGFKMPGFLFRKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 533

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 534  AFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWP----PFRVAVLHE 589

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 590  TGSFTHKKERLVRDIAHCHGILITSYSYIR-------LMQDDISRHDWH-------YVIL 635

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 636  DEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 695

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 696  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 755

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +       G P
Sbjct: 756  CRLTDEQHKVYQNFIDSKEVY--RILNGEMQ--IFSGLVALRKICNHPDLF-----SGGP 806

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                +   + DE +                  G+++ G++++                 S
Sbjct: 807  K---SLKGAPDEEL------------------GEDEFGYWKR-----------------S 828

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   LD++E +L              +   + ++D
Sbjct: 829  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYSYLKMD 876

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  V   L++TR G LG+NL  ANRVII D  WNP+ D QA
Sbjct: 877  GTTAIASRQPLIARYNE--DTSVFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQA 934

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 935  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 994

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
            F     +        +   G GS  Q     LK +L
Sbjct: 995  FTLSSPDTSQSTETSAIFAGTGSDVQTPRRHLKRRL 1030


>gi|395858719|ref|XP_003801707.1| PREDICTED: DNA excision repair protein ERCC-6 [Otolemur garnettii]
          Length = 1490

 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 192/632 (30%), Positives = 290/632 (45%), Gaps = 112/632 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 493  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 542

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 543  AFLAGLSYSKIRTRGSNYRYEGLGPTIIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 598

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                  ++ +L+       G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 599  TGSYTHKKEKLIRDIAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 644

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DFV  G LG+   F  
Sbjct: 645  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFME 704

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G + N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 705  QFSVPITMGGYANASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 764

Query: 998  VKLSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ-LTKD 1053
             +L+  Q ++Y+ F+D   ++G  N  +         F G  AL +I NHP +    TK+
Sbjct: 765  CRLTDEQHKIYQNFVDSKEVYGILNGEM-------QIFPGLIALRKICNHPDLFSGGTKN 817

Query: 1054 -KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 1112
             KG P  E  ED                                 Q  +W          
Sbjct: 818  LKGLPEDELEED---------------------------------QFGYWK--------- 835

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
                SGKM+++  +L +    G + L+FSQS   LD++E +L              +   
Sbjct: 836  ---RSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYT 880

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            + ++DG T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRVII D  WNP+
Sbjct: 881  YLKMDGTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPS 938

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 1292
             D QA  RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     
Sbjct: 939  TDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSN 998

Query: 1293 EMLHLFEFGDDENPDPLTAVSKENGQGSSQNT 1324
            ++  LF     +        +   G GS   T
Sbjct: 999  DLYELFSLTSPDTSQSTETSAIFAGTGSDVQT 1030


>gi|308468126|ref|XP_003096307.1| CRE-RAD-26 protein [Caenorhabditis remanei]
 gi|308243350|gb|EFO87302.1| CRE-RAD-26 protein [Caenorhabditis remanei]
          Length = 1304

 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/399 (37%), Positives = 216/399 (54%), Gaps = 57/399 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN    + +  + +   ++  L+ HQ+ GIRFM++N I+S+ + K  D G GCILAH+M
Sbjct: 257  LVNAGHPEEDPDIFVIGHLTHVLQPHQLGGIRFMYDNTIESLGEYKKSD-GFGCILAHSM 315

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ELKPLR 815
            GLGKT QVI F    +R+     +  L++ P+N + NW  E+ KW P        ++   
Sbjct: 316  GLGKTIQVITFSEIFLRATKA--KKVLVIVPINTIQNWYAEYDKWIPKFSDTGDRIRNFE 373

Query: 816  VFMLEDV--SRDRRAELLAKWRAKGGVFLIGYTAFR------------------NLSF-- 853
            VF+L D   S D+R  L+ +W  KGGV LIGY  FR                  NLS   
Sbjct: 374  VFLLGDAVKSFDQRVNLIEQWDQKGGVLLIGYDMFRLLIKMTVPKKAKKGRPKLNLSGVS 433

Query: 854  ------------------------GKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
                                    G  ++    +      L+ GPD++VCDE H IKN  
Sbjct: 434  AGLSRDQFEDSKDEEIEFETGYTNGGRIRQEAFSLLRSALLEPGPDLVVCDEGHKIKNIT 493

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
            A+ +  L  +  +RRI LTG PLQNNLMEY+CM+DFVR  +LG    F  RF+ PI+NGQ
Sbjct: 494  AEISTTLGAINTKRRIVLTGYPLQNNLMEYFCMIDFVRPKYLGIRKSFIERFEKPIKNGQ 553

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
              +S+ EDVKI  QR+H+L E +KGFVQR   +++KK LP    +V+ ++ S +QR+LY+
Sbjct: 554  CVDSSPEDVKIALQRTHVLVELVKGFVQRRTHHLLKKILPESKEYVLLLRKSQVQRQLYR 613

Query: 1010 RFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
             F+ L       V+N+ +     A + A ++IWNHP IL
Sbjct: 614  NFV-LWAKNEIAVNNDTVFNPLMA-FSACSKIWNHPDIL 650



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 131/209 (62%), Gaps = 6/209 (2%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW   L   +    L+   K+V+ L+IL   + +G+K L+FSQ++  LD++E  L K   
Sbjct: 791  DWTFQLFETYQEGVLENGYKIVVALEILDESTCIGEKILIFSQNLTALDMLEEILRKRQI 850

Query: 1160 PGKQG--KLWKKGKDWYRLDGRTESSERQKLVERFN-EPLNKRVKCTLISTRAGSLGINL 1216
             GK G  + W+K +++ RLDG T  ++R+KL+ RFN EP    +   LISTRAGSLGINL
Sbjct: 851  NGKNGPGERWEKNRNYLRLDGTTSGADREKLINRFNSEP---GLHLFLISTRAGSLGINL 907

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
             SANR II+D  WNP +D QA+ R +RYGQ K  F YRL+   +ME  I+ RQ++K GL 
Sbjct: 908  VSANRCIIIDACWNPCHDAQAVCRVYRYGQQKKTFVYRLIMDNSMERSIFNRQISKHGLQ 967

Query: 1277 ARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
             RVVD  QV   IS++E+  L  + + ++
Sbjct: 968  QRVVDDAQVDANISQKELETLLMYDEAQD 996


>gi|281346214|gb|EFB21798.1| hypothetical protein PANDA_016920 [Ailuropoda melanoleuca]
          Length = 1488

 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 190/640 (29%), Positives = 295/640 (46%), Gaps = 110/640 (17%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL- 773
            ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+IAFL 
Sbjct: 489  KMPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQIIAFLA 538

Query: 774  ---YTAMRS------------VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFM 818
               Y+ +R+            +  GL   +IV P  V+H W +EF  W P    P RV +
Sbjct: 539  GLSYSKIRTRGSNYRQVLLCRLFKGLGPTIIVCPTTVMHQWVKEFHTWWP----PFRVAI 594

Query: 819  LEDVSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI 876
            L +      ++ +L+       G+ +  Y+  R       +   +++R   H        
Sbjct: 595  LHETGSYTQKKEKLIRDIAHCHGILITSYSYIR-------LMQDDISRHDWH-------Y 640

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++ DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   
Sbjct: 641  VILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPV 700

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVF 994
            F  +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   
Sbjct: 701  FMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQ 760

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
            V+  +L+  Q R+Y+ F+D       R+ N  ++   F+G  AL +I NHP +       
Sbjct: 761  VLFCRLTEEQHRVYQNFIDSKEVY--RILNGDMQ--IFSGLVALRKICNHPDLF------ 810

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                                      P+N  D   G+ ++  F   +W            
Sbjct: 811  -----------------------SGGPKNPKDIPDGELEEDQF--GYWK----------- 834

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGKM+++  +L +    G + L+FSQS   LD++E +L              +   + 
Sbjct: 835  -RSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYSYL 881

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            ++DG T  + RQ L+ R+NE  +  +   L++TR G +G+NL  ANRVII D  WNP+ D
Sbjct: 882  KMDGTTAIASRQPLITRYNE--DTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTD 939

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
             QA  RAWR GQ K V  YRL+  GT+EEKI+ RQ+ K+ L  RV+   +  R     ++
Sbjct: 940  TQARERAWRIGQKKQVTVYRLLTAGTIEEKIFHRQIFKQFLTNRVLKDPKQRRFFKSNDL 999

Query: 1295 LHLFEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKLP 1333
              LF     +        +   G GS  Q     LK KLP
Sbjct: 1000 YELFTLTSPDASQSTETSAIFAGTGSEVQAPKLHLKRKLP 1039


>gi|441657345|ref|XP_004091168.1| PREDICTED: piggyBac transposable element-derived protein 3-like
            isoform 1 [Nomascus leucogenys]
          Length = 1492

 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 191/638 (29%), Positives = 294/638 (46%), Gaps = 107/638 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 493  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 542

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 543  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 598

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                  ++ +L+       G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 599  TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 644

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 645  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 704

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 705  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 764

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD--KG 1055
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +        KG
Sbjct: 765  CRLTDEQHKVYQNFIDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLFSGGPKNLKG 820

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
             P  E   D                                 Q  +W             
Sbjct: 821  LPDEELEAD---------------------------------QFGYWK------------ 835

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM+++  +L +    G + L+FSQS   LD++E +L              +   + +
Sbjct: 836  RSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLK 883

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T  + RQ L+ R+NE  +  +   L++TR G LGINL  ANRV+I D  WNP+ D 
Sbjct: 884  MDGTTTVASRQPLITRYNE--DTSIFVFLLTTRVGGLGINLTGANRVVIYDPDWNPSTDT 941

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++ 
Sbjct: 942  QARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLY 1001

Query: 1296 HLFEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
             LF     +        +   G GS  Q   C LK ++
Sbjct: 1002 ELFTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRRI 1039


>gi|350592895|ref|XP_003483566.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sus scrofa]
          Length = 1481

 Score =  264 bits (675), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 196/638 (30%), Positives = 295/638 (46%), Gaps = 107/638 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 483  DEGFKMPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 532

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 533  AFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 588

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A   G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 589  TGSFTHKKEKLVRDIAHCHGILITSYSYIR-------LMQDDISRHDWH-------YVIL 634

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 635  DEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 694

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 695  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 754

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD--KG 1055
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +        KG
Sbjct: 755  CRLTDEQHKVYQNFIDSKEVY--RILNGEMQ--IFSGLVALRKICNHPDLFSGGPKNFKG 810

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
             P  E  ED                                 Q  +W             
Sbjct: 811  IPGEELEED---------------------------------QFGYWK------------ 825

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM+++  +L +    G + L+FSQS   LD++E +L              +   + +
Sbjct: 826  RSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYSYLK 873

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRVII D  WNP+ D 
Sbjct: 874  MDGTTTIASRQPLITRYNE--DASIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDT 931

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++ 
Sbjct: 932  QARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLY 991

Query: 1296 HLFEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
             LF     +        +   G GS  Q     LK KL
Sbjct: 992  ELFTLTSPDTSQSTETSAIFAGTGSDVQTPKRHLKRKL 1029


>gi|73997935|ref|XP_534944.2| PREDICTED: DNA excision repair protein ERCC-6 [Canis lupus
            familiaris]
          Length = 1486

 Score =  264 bits (674), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 189/633 (29%), Positives = 291/633 (45%), Gaps = 104/633 (16%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL- 773
            ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+IAFL 
Sbjct: 494  KMPGFLFRKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQIIAFLA 543

Query: 774  ---YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR- 824
               Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +    
Sbjct: 544  GLSYSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWP----PFRVAILHETGSY 599

Query: 825  -DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAH 883
              ++ +L+       G+ +  Y+  R       +   +++R   H        ++ DE H
Sbjct: 600  TQKKEKLIRDIAHCHGILITSYSYIR-------LMQDDISRHDWH-------YVILDEGH 645

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
             I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  +F  
Sbjct: 646  KIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSV 705

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVITVKLS 1001
            PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+  +L+
Sbjct: 706  PITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLT 765

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
              Q ++Y+ F+D       R+ N  ++   F+G  AL +I NHP +              
Sbjct: 766  EEQHKVYQNFIDSKEVY--RILNGDMQ--IFSGLVALRKICNHPDLF------------- 808

Query: 1062 AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 1121
                               P+N+        +D F    +W              SGKM+
Sbjct: 809  ----------------SGGPKNLKTIPDDDEEDQF---GYWK------------RSGKMI 837

Query: 1122 LLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            ++  +L +    G + L+FSQS   LD++E +L              +   + ++DG T 
Sbjct: 838  VVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYSYLKMDGTTA 885

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
             + RQ L+ R+NE  +  +   L++TR G +G+NL  ANRVII D  WNP+ D QA  RA
Sbjct: 886  IASRQPLITRYNE--DTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERA 943

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFG 1301
            WR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  LF   
Sbjct: 944  WRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLT 1003

Query: 1302 DDENPDPLTAVSKENGQGSS-QNTNCALKHKLP 1333
                       +   G GS  Q     LK KLP
Sbjct: 1004 SPGASQSTETSAIFAGTGSEVQTPKLHLKRKLP 1036


>gi|417406531|gb|JAA49919.1| Putative snf2 family dna-dependent atpase domain-containing protein
            [Desmodus rotundus]
          Length = 1486

 Score =  263 bits (673), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 196/639 (30%), Positives = 296/639 (46%), Gaps = 103/639 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  +IP  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 488  DEGFKIPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 537

Query: 771  AFL----YTAMRSVN-----LGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 538  AFLAGLSYSKIRTRGSNYRFQGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAVLHE 593

Query: 822  V--SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
               S  ++ +L+       G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 594  TGSSTHKKEKLIQDIVHCHGILITSYSYIR-------LMQDDISRHDWH-------YVIL 639

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 640  DEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 699

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 700  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 759

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N + +   F+G  AL +I NHP +       G P
Sbjct: 760  CRLTDEQHKVYQNFIDSKEVY--RILNGETQ--IFSGLTALRKICNHPDLF-----SGGP 810

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                             KN  G       +D L E  +     S
Sbjct: 811  ---------------------------------KNHKGIS-----DDELEEDRFGYWKRS 832

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +      + L+FSQS   LDL+E +L              +   + ++D
Sbjct: 833  GKMIVVESLLKIWHKQNQRVLLFSQSRQMLDLLEVFLR------------AQKYSYLKMD 880

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ RFN+  +  +   L++TR G LG+NL  ANRVII D  WNP+ D QA
Sbjct: 881  GTTTIASRQPLIARFNKETS--IFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQA 938

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 939  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 998

Query: 1298 FEFGDDENPDPLTAVSKENGQGSSQNT-NCALKHKLPLS 1335
            F     +        +   G GS   T    LK KL L+
Sbjct: 999  FSLTSPDASQSTETSAIFAGTGSDVETPKRHLKRKLQLA 1037


>gi|326917893|ref|XP_003205229.1| PREDICTED: DNA repair and recombination protein RAD54B-like
            [Meleagris gallopavo]
          Length = 918

 Score =  263 bits (673), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 191/598 (31%), Positives = 305/598 (51%), Gaps = 81/598 (13%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            I+  L+ HQ  GI F++E ++  +R   SG    G ILA  MGLGKT Q I+ ++T +R 
Sbjct: 299  IANNLRPHQREGIVFLYECVM-GMRV--SGR--FGAILADEMGLGKTLQCISLVWTLLRQ 353

Query: 780  VNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWR 835
               G    L+ ALIVTP +++ NWK+EF KW  SE   ++VF    V +D + E      
Sbjct: 354  GVYGCKPVLKRALIVTPGSLVKNWKKEFQKWLGSER--IKVFT---VDQDHKVEEFIS-S 407

Query: 836  AKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
                V +I Y    R+L     ++D               ++L+CDE H +KN+   TT 
Sbjct: 408  PLYSVMIISYEMLLRSLD---QIQDIEF------------NLLICDEGHRLKNSSIKTTT 452

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            AL  + C+RRI LTG+P+QN+L E+Y +++FV  G LGS   +R  ++ PI   +  ++T
Sbjct: 453  ALTSLSCERRIILTGTPIQNDLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSAT 512

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
             E+  +  +R+  L      FV R    V+ K LPPK   +I  + + LQ  LY++ L  
Sbjct: 513  KEEKDLGEKRAAELTRLTGLFVLRRTQEVIDKFLPPKKENIIFCQPTALQLELYRKLLSS 572

Query: 1015 HGFTN---DRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
               T+    R+ N            AL ++ NHP +L          +E + D  SDE++
Sbjct: 573  RVITSCLQGRLENS----PHLICIGALKKLCNHPCLL------FKAVKEKSCDPKSDEHV 622

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 1131
            +            +   +G  D   F +D+ +D+     + E D SGK+ +L+ +L    
Sbjct: 623  E------------SSLYEGLTD--VFPQDYTSDI-----FSETD-SGKLQVLVKLLAAIR 662

Query: 1132 NM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
             +   ++ ++ S    TL+++            Q    + G  + RLDG T  S+RQ++V
Sbjct: 663  ELSSSERVVLVSNYTQTLNIL------------QETCKRYGYSYTRLDGNTPVSQRQQIV 710

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            + FN   +      L+S++AG +G+NL  A+ +I+ D  WNP  D+QA+ R WR GQ   
Sbjct: 711  DSFNCKFSPAF-IFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHT 769

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEFGDDEN 1305
            V  YRL+  G++EEKIY+RQ++K+ L+  VVD  +   H   S EE+ +LF   ++ +
Sbjct: 770  VHIYRLLTTGSIEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSVEELKNLFTLHENSS 827


>gi|300797826|ref|NP_001178272.1| DNA excision repair protein ERCC-6 [Bos taurus]
          Length = 1481

 Score =  263 bits (672), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 191/629 (30%), Positives = 292/629 (46%), Gaps = 106/629 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 484  DEGFKMPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 533

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P+     RV +L +
Sbjct: 534  AFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPA----FRVAVLHE 589

Query: 822  V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
              S   + E L +  A+  G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 590  TGSFTHKKEKLVRDIARCHGILITSYSYIR-------LMQDDISRHDWH-------YVIL 635

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 636  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 695

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 696  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 755

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD--KG 1055
             +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +        KG
Sbjct: 756  CRLTDEQHKVYQNFIDSKEVY--RILNGEMQ--IFSGLVALRKICNHPDLFSGGPKNLKG 811

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
             P  E  ED                                 Q  +W             
Sbjct: 812  IPDEELGED---------------------------------QFGYWK------------ 826

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM+++  +L +    G + L+FSQS   LD++E +L              +   + +
Sbjct: 827  RSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYSYLK 874

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRVII D  WNP+ D 
Sbjct: 875  MDGTTAIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDT 932

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++ 
Sbjct: 933  QARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLY 992

Query: 1296 HLFEFGDDENPDPLTAVSKENGQGSSQNT 1324
             LF     +        +   G GS   T
Sbjct: 993  ELFTLSSPDTSQSTETSAIFAGTGSDVQT 1021


>gi|432905593|ref|XP_004077453.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oryzias latipes]
          Length = 1424

 Score =  263 bits (672), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 185/608 (30%), Positives = 286/608 (47%), Gaps = 107/608 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R+MWE   Q            G IL   MGLGKT QVI
Sbjct: 485  DEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQA----------GGILGDEMGLGKTIQVI 534

Query: 771  AFL----YTAMRSVN-----LGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            +FL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 535  SFLAGLSYSKLRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWP----PFRVAVLHE 590

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                  ++ +L+ +  +  G+ +  Y+A RNL          + R   H        ++ 
Sbjct: 591  TGSFTSKKEKLIPEIASCHGILITSYSAVRNLQ-------DILIRYDWH-------YIIL 636

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   R  L+GSP+QNNL E + + DFV  G LG+   F  
Sbjct: 637  DEGHKIRNPNAAVTAACKQFQTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFME 696

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   V+   + + +L + +  + ++RM  +V     LP K   V+ 
Sbjct: 697  QFSVPITMGGYSNASPVQVQTAYKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLF 756

Query: 998  VKLSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
             +L+  QR++Y+ FLD   ++   N  +         F+G  AL +I NHP +       
Sbjct: 757  CRLTEEQRQVYQSFLDSKEVYQILNGDM-------QVFSGLIALRKICNHPDLFS----- 804

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
            G P                              L+G  +D          L  E  +   
Sbjct: 805  GGPR----------------------------MLKGIPED---------QLTEEEHFGFW 827

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGK++++  +L +    G + L+FSQS   LD++E ++             +    + 
Sbjct: 828  RRSGKLIVVESLLRLWFKQGHRVLLFSQSRQMLDILEVFVR------------ENNYSYL 875

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            ++DG T  + RQ L+ R+N+  ++ +   L++T+ G LG+NL  ANRVII D  WNP+ D
Sbjct: 876  KMDGTTTIASRQPLIARYNQ--DRSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTD 933

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
             QA  RAWR GQT  V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++
Sbjct: 934  TQARERAWRIGQTLQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDI 993

Query: 1295 LHLFEFGD 1302
              LF   D
Sbjct: 994  YELFTLAD 1001


>gi|402223361|gb|EJU03425.1| DNA repair protein SNF2 family [Dacryopinax sp. DJM-731 SS1]
          Length = 831

 Score =  263 bits (672), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 200/633 (31%), Positives = 311/633 (49%), Gaps = 89/633 (14%)

Query: 692  EVLGDAITGYIVNVVREKGEE---AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKS 748
            EVLG  + G       EK +E    V I   +   L+ HQV G++F+++    +I     
Sbjct: 199  EVLGLKMPG------EEKKKEDKVPVVIDPVLGKVLRPHQVEGVKFLYKCTTGAIV---- 248

Query: 749  GDKGLGCILAHTMGLGKTFQVIAFLYTAM----RSVNLGLRTALIVTPVNVLHNWKQEFM 804
             +   GCI+A  MGLGKT Q IA ++T +    R+    +  A+I  P +++ NW  E +
Sbjct: 249  -ENAYGCIMADEMGLGKTLQCIALMHTLLKQSPRAQKPTIDKAIIACPSSLVKNWGNELV 307

Query: 805  KWRPSELKPLRVFMLEDVSRDRRAELL---AKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 861
            KW   +  P    +L   ++  +AEL+    +W A GG         RN++    +    
Sbjct: 308  KWLGKDGAP---GILSVDNKGTKAELIESVKRWVAAGG---------RNVTQPVMIVSYE 355

Query: 862  MAREICHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
              R +C  L +    +L+CDE H +KN+ + T QAL  +K QRR+ L+G+P+QN+L EY+
Sbjct: 356  TLRTLCAELMNCEIGLLLCDEGHRLKNSDSLTFQALNGLKVQRRVILSGTPIQNDLSEYF 415

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
             +++F    +LGS  EFR  F+  I  G+  ++T ++ +    +   L E++  F+ R  
Sbjct: 416  SLLNFANPDYLGSRMEFRKNFELAILRGRDADATDKEKENSEAKLKELAERVSKFIIRRT 475

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQ 1040
             +++ K LP K   V+   LSPLQ  LY+ F+          S E  R     G Q L  
Sbjct: 476  NDLLSKYLPVKYEHVVFCTLSPLQLALYRHFIK---------SPETQRLLRGQGSQPLKA 526

Query: 1041 I------WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDD 1094
            I       NHP +L L +D   P  +         ++     +    R   D  +G  +D
Sbjct: 527  INLLKKLCNHPELLNLPED--LPGCDSVLPPEYGNSLYGGPKVSRAERGARD--RGMGED 582

Query: 1095 GFFQKDWWNDLLHEHTYKELDYSGKMVLL---LDILTMCSNMGDKSLVFSQSIPTLDLIE 1151
                                ++ GK ++L   LD +   +N  DK ++ S    TLDL E
Sbjct: 583  -----------------VRCEWGGKFLVLERFLDRIKRETN--DKIVLISNYTQTLDLFE 623

Query: 1152 FYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGS 1211
                K+ R  + G        ++RLDG     +RQKLV++FN+P  K     L+S++AG 
Sbjct: 624  ----KMCRSKRYG--------FFRLDGTMSVVKRQKLVDQFNDPEGKEF-VFLLSSKAGG 670

Query: 1212 LGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVT 1271
             GINL  ANR+I+ D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  
Sbjct: 671  CGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQAQ 730

Query: 1272 KEGLAARVVD-RQQVHRTISKEEMLHLFEFGDD 1303
            K+ L++ VVD ++   R  S +++  LF F D+
Sbjct: 731  KQALSSCVVDEKEDAERHFSADDLRKLFLFKDN 763


>gi|340518611|gb|EGR48851.1| hypothetical protein TRIREDRAFT_121506 [Trichoderma reesei QM6a]
          Length = 1109

 Score =  263 bits (671), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 195/625 (31%), Positives = 303/625 (48%), Gaps = 93/625 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAK----LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++  E+  ++P  I  K    L+ HQ+ G++FM++ +   +      +K  GCI+
Sbjct: 494  ILGIKKQVEEDHPKVPVVIDPKIAKCLRPHQIEGVKFMYKCVTGLV-----DEKAHGCIM 548

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q I  ++T ++ S N G   ++ A++V P +++ NW  E  KW  P+ + 
Sbjct: 549  ADEMGLGKTLQCITLMWTLLKQSPNAGKSTIQKAIVVCPASLVKNWANELTKWLGPNAIN 608

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      E++ R  R   +A  R+    V ++ Y   R N+   KH K         
Sbjct: 609  PFAIDGKAPKEELKRQLRQWAIASGRSITRPVIIVSYETLRLNVEELKHTKI-------- 660

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
                    +L CDE H +KN  ++T  AL  +   RR+ LTG+P+QN+L EY+ +  F  
Sbjct: 661  -------GLLFCDEGHRLKNADSNTFNALNDLNVSRRVILTGTPIQNDLTEYFALTSFAN 713

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS  EFR RF+ PI  G+  ++T E+ +  ++ +  L   +  F+ R   +++ K 
Sbjct: 714  PDLLGSRLEFRKRFEIPILRGRDADATEEERRRGDECTGELLSVVNKFLIRRTNDILSKY 773

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   L+P Q  LY  F+   D+      + S              L ++ NH
Sbjct: 774  LPVKYEHVVFCNLAPFQIDLYNYFITSPDIQALLRGKGSQP------LKAINILKKLCNH 827

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L L+ D     +   +D    E                   +G++ D    K W   
Sbjct: 828  PDLLNLSDDLPGSEKCFPDDYVPKEA------------------RGRDRD---IKPW--- 863

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM +L  +L  +  +  DK ++ S    TLDL E    +L R  + 
Sbjct: 864  -----------YSGKMQVLDRMLAKIREDTNDKIVLISNYTSTLDLFE----RLCRDRQY 908

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    ++RQKLV+RFN+P N      L+S++AG  GINL  ANR++
Sbjct: 909  GCL--------RLDGTMNVNKRQKLVDRFNDP-NGDEFIFLLSSKAGGCGINLIGANRLV 959

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            + D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  
Sbjct: 960  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSA 1019

Query: 1284 Q-VHRTISKEEMLHLFEFGDDENPD 1307
            + V R  S + +  LF++  D   D
Sbjct: 1020 EDVERHFSLDSLRELFQYRPDTTSD 1044


>gi|209489463|gb|ACI49222.1| hypothetical protein Csp3_JD05.007 [Caenorhabditis angaria]
          Length = 1195

 Score =  263 bits (671), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 176/499 (35%), Positives = 269/499 (53%), Gaps = 69/499 (13%)

Query: 601  GSENLIVSSSESDSENSDADNNLKIGGKRK--------------QKKKIRRILDDAELGE 646
             SE+  + SS S++ ++D+D ++K+  + +              +KKK R ++DD  L +
Sbjct: 150  SSEDDELPSSRSNN-DTDSDGSIKLPSRTQAKSNKKELRPIEDDKKKKKRGLIDDDGLAK 208

Query: 647  ETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVV 706
            ET      EKER++RL+  Q +F       N + L+  L    ++  +G +    + +VV
Sbjct: 209  ETVDAEKAEKERRKRLEQKQKEF-------NGIELEEGLDLTEAL--IGTSSQRKLKSVV 259

Query: 707  -----REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
                 + +  E V +  SI   LK HQ  GI+FM++   +SI ++ +  +G G ILAH M
Sbjct: 260  VDPDNKSEEPEPVEVHPSIVRILKPHQAQGIQFMYDCAFESIDRLDT--EGSGGILAHCM 317

Query: 762  GLGKTFQVIAFLYTAMRSVNLG--LRTALIVTPVNVLHNWKQEFMKW---RPSELKPLRV 816
            GLGKT QVI+FL+T M    +G   +  L+V P NV+ NW +EFMKW      EL  + V
Sbjct: 318  GLGKTLQVISFLHTVMMHPKVGEKAKHVLVVVPKNVIINWFKEFMKWLSDNDEELDTIDV 377

Query: 817  FMLEDV-SRDRRAELLAKWRAKG--GVFLIGYTAFRNLS-----------------FGKH 856
              L+   + + R   L  W       V +IGY  FR L+                 F K 
Sbjct: 378  TELDSAKTVEERQRALLNWHNSDTPSVMIIGYDMFRILTAEEDPKKKKSKVKKNRKFLKA 437

Query: 857  VKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNN 915
             +D          LQ+ GPD++VCDEAH +KN  +  ++ + +++ +RRI LTG+PLQNN
Sbjct: 438  QED------FRFCLQNPGPDLIVCDEAHKLKNDESALSKTMVKIRTKRRICLTGTPLQNN 491

Query: 916  LMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF 975
            LMEY+CMV+FV+ G LG+  EF NRF N I  G+  +++S +V+ M +R H+LYE LK  
Sbjct: 492  LMEYHCMVNFVKPGLLGTKGEFANRFVNIINRGRTKDASSAEVQFMKRRCHVLYEHLKKC 551

Query: 976  VQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY 1035
            V R D  V+ + +PPK  +V+ V+++  Q +LY+ FLD      + VS E + K     Y
Sbjct: 552  VDRKDYRVLTEAIPPKQEYVLNVRMTDSQCKLYRAFLD------NVVSGEGLSKRLLPDY 605

Query: 1036 QALAQIWNHPGILQLTKDK 1054
              L++IW HP  L L + K
Sbjct: 606  HVLSRIWTHPYQLVLHEQK 624



 Score =  183 bits (465), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 143/245 (58%), Gaps = 27/245 (11%)

Query: 1084 MNDFLQGK---NDDGFFQKD---------WWNDL--LHEHTYKELDYSGKMVLLLDILTM 1129
            +N F Q +    DD  F++D         W+  L  L+E      + S K+VLL  I+  
Sbjct: 728  LNGFRQSRRLAGDDPEFERDTETPPEYSGWFAKLGLLNEEDQCNFEMSNKLVLLCSIIKK 787

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK-----------QGKLWK--KGKDWYRL 1176
            C  +GDK LVFSQS+ +L LI+  L  +   G+           +G+ W   +G+D+  +
Sbjct: 788  CEEIGDKLLVFSQSLESLALIKRMLEYMAGTGQWFDDGHEALNAEGETWSWLEGQDYLTI 847

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG   + +R  +   FN+  N R +  LISTRAGSLG N+ SANRV+I D  WNP++D Q
Sbjct: 848  DGSIAAGKRDAVQTHFNDADNHRARLMLISTRAGSLGTNMVSANRVVIFDACWNPSHDTQ 907

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            +++R +R+GQTKPV+ YR +A GTMEE+IYKRQVTKE  + RVVD  Q+ R     ++  
Sbjct: 908  SLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDEAQIQRHYDGHDLQE 967

Query: 1297 LFEFG 1301
            L++F 
Sbjct: 968  LYQFN 972


>gi|357631781|gb|EHJ79250.1| steroid receptor-interacting snf2 domain protein [Danaus plexippus]
          Length = 764

 Score =  263 bits (671), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 187/610 (30%), Positives = 296/610 (48%), Gaps = 97/610 (15%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
            AV +   +   L+ HQ  G++FM++ +  +       D   GCI+A  MGLGKT Q I  
Sbjct: 123  AVVVDPVLGNILRPHQREGVKFMYDCVTGA-----QIDNAYGCIMADEMGLGKTLQCITL 177

Query: 773  LYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            L+T +R        +  A+IV P +++ NW  E  KW    +  L       +    +AE
Sbjct: 178  LWTLLRQGPDCKPTICKAIIVCPSSLVKNWYNEIGKWLGQRINAL------PMDGGSKAE 231

Query: 830  L----------LAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
            +           A  R    V +I Y  FR  S             I HA + G  +++C
Sbjct: 232  ITLKLQQFMNTFAAIRVATPVLIISYETFRIYS------------NILHASEVG--LVLC 277

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN+   T QAL  +K +RRI ++G+P+QN+L EY+ +V FV  G LG++ +F+ 
Sbjct: 278  DEGHRLKNSENQTYQALMGLKAKRRILISGTPIQNDLTEYFSLVHFVNSGILGTAQDFKK 337

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
            R++NPI  GQ   +T ++ +   +    L   +   + R   +++ K LP K   VI VK
Sbjct: 338  RYENPILKGQDALATPQERQKAQECLQTLTSIVNKCMIRRTSSLLTKYLPVKFEQVICVK 397

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRV-SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKG 1055
            ++PLQ +LY+ F++     N    + +K   S  +    L ++ NHP ++    + + +G
Sbjct: 398  MTPLQTQLYRNFINSDAIKNKFAGTGDKNTLSALSSITMLKKLCNHPDLVYDKIMERSEG 457

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
            +   +D   S+ D       +   +P                                 +
Sbjct: 458  FEKGKDLLPSNYD-------IKDVRP---------------------------------E 477

Query: 1116 YSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
            YSGK+++L  IL  + +N  DK ++ S    TLDL E    KL R        K+   + 
Sbjct: 478  YSGKLMILDCILANLKTNTDDKIVLVSNYTQTLDLFE----KLCR--------KRCYQYV 525

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VE FN   +K     ++S++AG  G+NL  ANR+I+ D  WNP  D
Sbjct: 526  RLDGSMTIKKRAKVVESFNSKESKEW-IFMLSSKAGGCGLNLIGANRLIMFDPDWNPAND 584

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ KP + YRL+A GT+EEKI++RQ  K+ L+  VVD+ +   R  + ++
Sbjct: 585  DQAMARVWRDGQKKPCYIYRLLATGTIEEKIFQRQAHKKALSDTVVDQNEDSMRHFTSDD 644

Query: 1294 MLHLFEFGDD 1303
            +  LF   D+
Sbjct: 645  LKDLFRLEDN 654


>gi|326923687|ref|XP_003208066.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial
            [Meleagris gallopavo]
          Length = 1498

 Score =  263 bits (671), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 183/601 (30%), Positives = 283/601 (47%), Gaps = 101/601 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            EE  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 491  EEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 540

Query: 771  AFL----YTAMRSVN-----LGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 541  AFLAGLSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWP----PFRVAILHE 596

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                 +++ +L+ +  +  G+ +  Y+  R +    H  D +               ++ 
Sbjct: 597  TGSYTNKKVKLIREIASCHGILITSYSYIRLMQDNIHSYDWHY--------------VIL 642

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DFV  G LG+   F  
Sbjct: 643  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFME 702

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 703  QFSVPITMGGYSNASPVQVKTAYKCACVLRDAINPYLLRRMKADVKMSLSLPDKNEQVLF 762

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  QRR+Y+ F+D       ++ N  ++   F+G  AL +I NHP +       G P
Sbjct: 763  CRLTDEQRRVYQNFIDSKEVY--QILNGDMQ--VFSGLVALRKICNHPDLF-----SGGP 813

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                    +  E  D                         Q  +W              S
Sbjct: 814  KILKCLPDADLEEAD-------------------------QFGYWK------------RS 836

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L F+QS   L ++E ++              +   + R+D
Sbjct: 837  GKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFVR------------DRNYSYLRMD 884

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +K +   L++TR G +G+NL  A+RVII D  WNP+ D QA
Sbjct: 885  GTTTIASRQPLITRYNE--DKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQA 942

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 943  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1002

Query: 1298 F 1298
            F
Sbjct: 1003 F 1003


>gi|358394253|gb|EHK43646.1| hypothetical protein TRIATDRAFT_319009 [Trichoderma atroviride IMI
            206040]
          Length = 802

 Score =  263 bits (671), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 194/630 (30%), Positives = 304/630 (48%), Gaps = 103/630 (16%)

Query: 702  IVNVVREKGEEAVRIPSSISAK----LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++   +  ++P  I  K    L+ HQ+ G++FM++ +   +      +K  GCI+
Sbjct: 187  ILGIQKQVETDHPKVPVVIDPKIAKCLRPHQIEGVKFMYKCVTGLV-----DEKAQGCIM 241

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q I  ++T ++ S + G   ++ A++V P +++ NW  E  KW  P+ + 
Sbjct: 242  ADEMGLGKTLQCITLMWTLLKQSPSAGKSTIQKAIVVCPASLVKNWANELTKWLGPNAIN 301

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      E++ R  R   +A  R+    V ++ Y   R N+   KH K         
Sbjct: 302  PFAIDGKAPKEELKRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI-------- 353

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
                    +L CDE H +KN  ++T  AL  +K  RR+ LTG+P+QN+L EY+ +  F  
Sbjct: 354  -------GLLFCDEGHRLKNADSNTFNALNDLKVSRRVILTGTPIQNDLTEYFALTSFAN 406

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS  EFR RF+ PI  G+  +++ +D +  ++ +  L   +  F+ R   +++ K 
Sbjct: 407  PDLLGSRLEFRKRFEIPILRGRDADASEQDRRRGDECTSELLGVVNKFLIRRTNDILSKY 466

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   L+P Q  LY  F+   D+      + S              L ++ NH
Sbjct: 467  LPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGKGSQP------LKAINILKKLCNH 520

Query: 1045 PGILQLTKD-----KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK 1099
            P +L L  D     K +P     ++S                       +G++ D    K
Sbjct: 521  PDLLNLADDLPGSEKCFPGDYVPKES-----------------------RGRDRD---IK 554

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
             W              YSGKM +L  +L  +  +  DK ++ S    TLDL E    +L 
Sbjct: 555  PW--------------YSGKMQVLDRMLAKIREDTNDKIVLISNYTSTLDLFE----RLC 596

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
            R  + G L        RLDG    ++RQKLV+RFN+P N      L+S++AG  GINL  
Sbjct: 597  RDRQYGCL--------RLDGTMNVNKRQKLVDRFNDP-NGDEFIFLLSSKAGGCGINLIG 647

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ 
Sbjct: 648  ANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSC 707

Query: 1279 VVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            VVD  + V R  S + +  LF++  D   D
Sbjct: 708  VVDSAEDVERHFSLDSLRELFQYRPDTTSD 737


>gi|402854403|ref|XP_003891859.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination protein
            RAD54-like [Papio anubis]
          Length = 747

 Score =  263 bits (671), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 192/607 (31%), Positives = 297/607 (48%), Gaps = 92/607 (15%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAMVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D K+  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRKLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPAEELREGKMSVSSLSSITSLKKLCNHPALIH------- 464

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                   D   +E                D   G  D   F   + +  L      E   
Sbjct: 465  -------DKCVEE---------------EDGFVGALD--LFPPGYSSKAL------EPQL 494

Query: 1117 SGKMVLLLDILTM---CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
            SGKM++L  IL +   CS+  DK ++ S    TLDL E             KL +  +  
Sbjct: 495  SGKMLVLDYILAVTRSCSS--DKVVLVSNYTQTLDLFE-------------KLCRARRYL 539

Query: 1174 Y-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            Y RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP 
Sbjct: 540  YVRLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 598

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISK 1291
             D QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S 
Sbjct: 599  NDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSL 658

Query: 1292 EEMLHLF 1298
             E+  LF
Sbjct: 659  GELKELF 665


>gi|126272865|ref|XP_001366076.1| PREDICTED: DNA excision repair protein ERCC-6 [Monodelphis domestica]
          Length = 1492

 Score =  263 bits (671), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 184/601 (30%), Positives = 290/601 (48%), Gaps = 101/601 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 488  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 537

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 538  AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVREFHTWWP----PFRVAILHE 593

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                 +++ +L+ +     G+ +  Y+  R       +   N+     H        ++ 
Sbjct: 594  TGSYTNKKVKLIQEIARCHGILITSYSYIR-------LMQDNINNHDWH-------YVIL 639

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DFV  G LG+   F  
Sbjct: 640  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFME 699

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 700  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 759

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  QR++Y+ F+D       R+ N +++   F+G  AL +I NHP +       G P
Sbjct: 760  CRLTDEQRKVYQNFIDSKEVY--RILNGEMQ--VFSGLVALRKICNHPDLFS-----GGP 810

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                              +I   P   +D L+  +  G++++                 S
Sbjct: 811  K-----------------IIKGIP---DDELEEADQFGYWKR-----------------S 833

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   L L+E +L              +   + ++D
Sbjct: 834  GKMIVVESLLKIWHKQGHRVLLFSQSRQMLHLLEVFLR------------ARDYSYLKMD 881

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G +G+NL  ANRVII D  WNP+ D QA
Sbjct: 882  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQA 939

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  R++   +  R     ++  L
Sbjct: 940  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILKDPKQRRFFKSNDLYEL 999

Query: 1298 F 1298
            F
Sbjct: 1000 F 1000


>gi|308498547|ref|XP_003111460.1| CRE-XNP-1 protein [Caenorhabditis remanei]
 gi|308241008|gb|EFO84960.1| CRE-XNP-1 protein [Caenorhabditis remanei]
          Length = 1391

 Score =  262 bits (670), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 172/469 (36%), Positives = 249/469 (53%), Gaps = 71/469 (15%)

Query: 638  ILDDAELGEETKRKIAIEKERQERLKSLQVQF-----------------SSKSKLMNSVT 680
            I+D A+L +ET      EK+R++RL+  Q +F                 +S  + + SV 
Sbjct: 416  IMDSADLAKETIDAEKAEKDRRKRLEKKQKEFNGIILEEGEDLTELLTGTSSHRKLKSVV 475

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII 740
            LD D S        GD  T              V + +S+   LK HQ  GI+FM++   
Sbjct: 476  LDPDSS--------GDPKT-------------PVEVHNSLVRILKPHQAHGIQFMYDCAF 514

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALIVTPVNVLHN 798
            +S+ ++ +  +G G ILAH MGLGKT QVI FL+T M    LG   +  L+V P NV+ N
Sbjct: 515  ESLDRLDT--EGSGGILAHCMGLGKTLQVITFLHTVMNHEKLGEKCKRVLVVVPKNVIIN 572

Query: 799  WKQEFMKW---RPSELKPLRVFMLE---DVSRDRRAELLAKWR--AKGGVFLIGYTAFRN 850
            W +EF KW      EL  ++V  L+   DV   RRA  L +W       V +IGY  FR 
Sbjct: 573  WFKEFQKWLLENDEELDTIQVKELDSYKDVDERRRA--LQRWHNCKNPSVMIIGYDMFRI 630

Query: 851  LSFGKHVKDRN--MAREICHALQD--------GPDILVCDEAHMIKNTRADTTQALKQVK 900
            L+     K +   ++R++  A +D        GPD++VCDEAH +KN  +  ++ + ++K
Sbjct: 631  LTCEDDPKRKKTKLSRKLTKAKEDFRKYLQNPGPDLIVCDEAHKLKNDESALSKCMVKIK 690

Query: 901  CQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKI 960
             +RR+ LTG+PLQNNLMEY+CMV+FV+ G LG+  EF NRF N I  G+  +++S +V  
Sbjct: 691  TKRRLCLTGTPLQNNLMEYHCMVNFVKPGLLGTKTEFANRFVNIINRGRTKDASSLEVSF 750

Query: 961  MNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTND 1020
            M +R H+LY+ LK  V R D  V+ + +PPK  +VI V+L+  Q  LY  FL      ND
Sbjct: 751  MKRRCHVLYDHLKKCVDRKDYRVLTEAIPPKQEYVINVRLTERQCALYTTFL------ND 804

Query: 1021 RVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR---EDAEDSS 1066
             V N  + K     Y   ++IW HP  L L + +    R   EDAE+ +
Sbjct: 805  VVGNTGLSKRLLPDYHMFSRIWTHPYQLILHEQRLERERMLKEDAEEEA 853



 Score =  189 bits (480), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 93/221 (42%), Positives = 138/221 (62%), Gaps = 14/221 (6%)

Query: 1101 WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
            W++ ++ +    +   S K+VLL+ I+  C  +GDK LVFSQS+ +L LI+  L  +   
Sbjct: 957  WFSKMVSDDDRDDYTLSNKLVLLMQIIKKCEEIGDKLLVFSQSLESLSLIKRMLEYMAGT 1016

Query: 1161 GK-----------QGKLWK--KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
            G+           +G+ W   +G+D+  +DG  ++ +R  +   FN P N R +  LIST
Sbjct: 1017 GQWFADGHEALNQEGETWSWLEGEDYMVIDGSVQTGKRDSVQTHFNSPENLRARLMLIST 1076

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
            RAGSLG N+ +ANRVII D  WNP++D Q+++R +R+GQTKPV+ YR +A GTMEE+IYK
Sbjct: 1077 RAGSLGTNMVAANRVIIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYK 1136

Query: 1268 RQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE-NPD 1307
            RQVTKE  + RVVD  Q+ R     ++  L++F   E +PD
Sbjct: 1137 RQVTKESTSMRVVDEAQIQRHYLGHDLTELYQFTPSEFDPD 1177


>gi|67624313|ref|XP_668439.1| DNA repair protein RAD54-like [Cryptosporidium hominis TU502]
 gi|54659648|gb|EAL38216.1| DNA repair protein RAD54-like [Cryptosporidium hominis]
          Length = 877

 Score =  262 bits (670), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 192/636 (30%), Positives = 299/636 (47%), Gaps = 89/636 (13%)

Query: 698  ITGYIVNVVREKGEE-AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCI 756
            I   I+ +  E GE+  + + S ++  L+ HQ  G+ F++E  +  +R       G GCI
Sbjct: 110  INPLILWISSEDGEKRVIEVDSMLTKWLREHQRQGVTFIFE-CLMGLRDFD----GNGCI 164

Query: 757  LAHTMGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            LA  MGLGKT Q I  L+T +     G   +R A++V P +++ NW  E  KW   + K 
Sbjct: 165  LADDMGLGKTLQSITILWTLLNQGFDGKPSVRKAVVVCPASLVKNWASEIEKWLQGKCKC 224

Query: 814  LRVFMLEDVSRDRRAELLA----KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA 869
              V       RDR   + A    K+     + +  Y  FR      HV+           
Sbjct: 225  TPV-----AERDREKVVSAFAGFKYDTMSRILIASYETFR-----MHVEQ---------- 264

Query: 870  LQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
            L   P D+++CDEAH +KN +  T  A+  +  ++R+ L+G+P+QN+L+E+Y +V     
Sbjct: 265  LDGVPIDLVICDEAHRLKNDKTKTAMAINNLPAKKRLLLSGTPIQNDLVEFYSLVSLANP 324

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
              LG   +F+  + NPI  G+  +++    ++  QR   L      F+ R    ++ K L
Sbjct: 325  QVLGDVSQFKKIYANPILEGREPDASEYQQELATQRLQELSNITNHFILRRANTLLAKVL 384

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHG----FTNDRVSNEK-IRKSFFAGYQALAQIWN 1043
            PPK +  I   L+P+Q  LY+RFL          +D   N   +     +  Q+L ++ N
Sbjct: 385  PPKIILNIFCNLTPIQNYLYRRFLRSSACKKLLDSDSTGNPTGLTGQVLSSIQSLMKLCN 444

Query: 1044 HPGILQLTKDKGYPSREDAED----------SSSDENMDYN--VVIGEKPRNMNDFLQGK 1091
            HP +++     GY    +  +          +S +   +Y   V +G   RN        
Sbjct: 445  HPTLIRPKTSGGYGKGFEGSEKYLEMIHGRSASGESGGEYKKRVTVGSSIRN-------S 497

Query: 1092 NDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLI 1150
            N  GF  K               + SGK+ LL  +L  + SN  D+ ++ S    TLD+ 
Sbjct: 498  NRTGFSSKP--------------NLSGKLYLLSRLLFHIRSNTKDRVVLVSNYTQTLDVF 543

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E     L  P              RLDG T  + R  LV+ FN+P N      L+S++AG
Sbjct: 544  ECLCRDLQVP------------CVRLDGSTSITRRHNLVKTFNDP-NSNSFAFLLSSKAG 590

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
              GINL  ANR+++ D  WNP  D QA+ R WR GQ K  + YRL + GT+EEKIY+RQ+
Sbjct: 591  GCGINLIGANRLVMFDPDWNPANDKQALARVWRDGQKKNCYIYRLFSTGTIEEKIYQRQL 650

Query: 1271 TKEGLAARVVD---RQQVHRTISKEEMLHLFEFGDD 1303
             K+GL+A +V      ++  +IS + +  LF   +D
Sbjct: 651  CKDGLSAMLVTSGGNNELKDSISADLVRDLFTLKED 686


>gi|307177261|gb|EFN66439.1| DNA repair and recombination protein RAD54B [Camponotus floridanus]
          Length = 845

 Score =  262 bits (670), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 186/597 (31%), Positives = 285/597 (47%), Gaps = 83/597 (13%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+ V +   ++AKL+ HQ  GI F++E     +  +K  D   G ILA  MGLGKT Q I
Sbjct: 250  EQKVSVDFCLTAKLREHQRYGIVFLYE----CLMGLKVPDY-FGAILADEMGLGKTLQCI 304

Query: 771  AFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR 827
              ++T ++    G   +R  LI+TP ++ +NW +EF KW    L   R+       ++R 
Sbjct: 305  TLIWTMLKKGPYGKPIVRRVLIITPRSLCNNWDKEFRKW----LGCHRISPYVVDGKNRP 360

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
             + +   R    V +I Y           VK     +EI        D+LVCDE H +KN
Sbjct: 361  KDFIKHPR--NSVLIISYEML--------VKSHVEIKEITF------DLLVCDEGHRLKN 404

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
            +     + L ++ C++RI LTG+P+QN+L E+Y +VDFV  G LGS  E++N +++PI  
Sbjct: 405  SNIKAAKLLHEINCKKRIMLTGTPIQNDLKEFYTLVDFVNPGILGSPLEYKNYYEDPIVA 464

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
             Q  N+    + + ++R+  L+E+ K F+ R   N + K LP K   V+   L+  Q  L
Sbjct: 465  SQCPNADKNVLSLGSERATELHERTKSFILRRTQNTINKYLPCKYEIVLFCSLTSEQMDL 524

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            Y    D   + N     +K   +  +   AL +I NHP +     DK    RE    +  
Sbjct: 525  YSLVTD--AWFNKTCLQDK-NHTHLSIIIALKKICNHPNL--FINDKENTLRETLSKAIC 579

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
                                +Q K D  F +                 Y GK+ +L  ++
Sbjct: 580  T-------------------IQLKQDKNFIK-----------------YCGKITILQVLM 603

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
                   +K ++ S    TLDL E   +             +   + RLDG   SS R K
Sbjct: 604  RNLKKTDEKLVLVSYYTQTLDLFETICN------------IEELKFLRLDGTISSSTRSK 651

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            ++E+FN   +   K  L+S +AG +G+NL  A+R+++ D  WNP  D+QA+ R WR GQ 
Sbjct: 652  IIEQFNTRSDNS-KILLLSAKAGGVGLNLPGASRLVLFDSDWNPASDVQAMARIWRDGQK 710

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV-HRTISKEEMLHLFEFGDD 1303
            K V+ YRL+  GT+EEKIY+RQ++K  L+  VVD   +    +S  E+  LF    D
Sbjct: 711  KNVYIYRLLTTGTIEEKIYQRQISKASLSESVVDLNHLGSLKLSTAELKDLFTLATD 767


>gi|124487019|ref|NP_001074690.1| DNA excision repair protein ERCC-6 [Mus musculus]
 gi|189442813|gb|AAI67234.1| Excision repair cross-complementing rodent repair deficiency,
            complementation group 6 [synthetic construct]
          Length = 1481

 Score =  262 bits (670), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 194/635 (30%), Positives = 293/635 (46%), Gaps = 103/635 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 490  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 539

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 540  AFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWP----PFRVAVLHE 595

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                  ++  L+       GV +  Y+  R       +   +++R   H        ++ 
Sbjct: 596  TGSYTHKKERLIRDIVYCHGVLITSYSYIR-------LMQDDISRHDWH-------YVIL 641

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 642  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 701

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 702  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 761

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +     F+G  AL +I NHP +       G P
Sbjct: 762  CRLTDEQHKVYQNFIDSKAVY--RILNGE--NQIFSGLVALRKICNHPDLF-----SGGP 812

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
              ++A     DE                                    L E  +     S
Sbjct: 813  --KNASGPPEDE------------------------------------LEEEQFGHWRRS 834

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   L ++E +L    R  K   L        ++D
Sbjct: 835  GKMIVVESLLKIWHRQGQRVLLFSQSRQMLHILEVFL----RAHKYSYL--------KMD 882

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ ++NE  +  +   L++TR G LG+NL  ANRVII D  WNP+ D QA
Sbjct: 883  GTTTIASRQPLITKYNE--DTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQA 940

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 941  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1000

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHK 1331
            F     +        +   G GSS Q   C LK +
Sbjct: 1001 FTLTSPDASQGTETSAIFAGTGSSIQTPKCQLKKR 1035


>gi|344287342|ref|XP_003415412.1| PREDICTED: DNA repair and recombination protein RAD54-like [Loxodonta
            africana]
          Length = 794

 Score =  262 bits (670), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 298/607 (49%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 183  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGS---YGCIMADEMGLGKT 237

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 238  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 294

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L ++      R    + +I Y  FR L  G               LQ G   +
Sbjct: 295  KDEIDQKLERFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 339

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 340  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 399

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D  +  +R   L   +   + R   +++ K LP K   V+
Sbjct: 400  FKKHFELPILKGRDAAASEADRHLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVV 459

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 460  CCRLTPLQMELYKRFLR-QAKPAEELCEAKMSVSSLSSITSLKKLCNHPALI-------- 510

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D  +G  D   F   + +  L      E   
Sbjct: 511  ----------------YDKCVEEE-----DGFEGALD--IFPPGYSSKAL------EPQL 541

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 542  SGKMLVLDYILAVTRSRSNDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 588

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN  L+      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 589  RLDGTMSIKKRAKVVERFNS-LSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 647

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 648  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 707

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 708  LKELFTL 714


>gi|440907311|gb|ELR57471.1| DNA repair and recombination protein RAD54-like protein, partial [Bos
            grunniens mutus]
          Length = 749

 Score =  262 bits (670), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 189/605 (31%), Positives = 295/605 (48%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 137  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 191

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 192  LQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVGKWLGGRIQPLAI---DGGS 248

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 249  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 293

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ E
Sbjct: 294  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQE 353

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++ ED ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 354  FKKHFELPILKGRDAAASEEDRRVGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 413

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++    DK  
Sbjct: 414  CCRLTPLQIELYKRFLR-QAKPAEELREGKMSVSSLSSITSLKKLCNHPALIY---DKCV 469

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
               +  E +                  ++ F  G N                    E   
Sbjct: 470  EEEDGFEGT------------------LDIFPPGYNSKAL----------------EPQL 495

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 496  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 542

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 543  RLDGTMSIKKRAKVVERFNNPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 601

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 602  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 661

Query: 1294 MLHLF 1298
            +  LF
Sbjct: 662  LKELF 666


>gi|338721715|ref|XP_001915622.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination protein
            RAD54-like [Equus caballus]
          Length = 763

 Score =  262 bits (670), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 299/607 (49%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 144  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 198

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 199  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 255

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 256  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 300

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 301  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 360

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D  +  +R   L   +   + R   +++ K LP K   V+
Sbjct: 361  FKKHFELPILKGRDAAASEADRHLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 420

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYK+FL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 421  CCRLTPLQNELYKKFLR-QAKPAEELREGKMSVSSLSSITSLKKLCNHPALI-------- 471

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D  +G  D   F   + +  L      E   
Sbjct: 472  ----------------YDKCVEEE-----DGFEGALD--IFPPGYSSKAL------EPQL 502

Query: 1117 SGKMVLLLDILTMCSNMG-DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  + G DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 503  SGKMLVLDYILAVTRSRGNDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 549

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN PL+      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 550  RLDGTMSIKKRAKVVERFNNPLSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 608

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 609  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 668

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 669  LKELFTL 675


>gi|332019859|gb|EGI60320.1| DNA repair and recombination protein RAD54B [Acromyrmex echinatior]
          Length = 857

 Score =  262 bits (670), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 177/597 (29%), Positives = 296/597 (49%), Gaps = 83/597 (13%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+ + + S + AKL+ HQ  GI F++E ++    KV +     G ILA  MGLGKT Q I
Sbjct: 265  EQEILVDSCLVAKLREHQRHGIVFLYECLMG--LKVPNY---FGAILADEMGLGKTLQCI 319

Query: 771  AFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR 827
              ++T ++    G   ++  LIVTP ++ +NW++EF+KW    L   R+F      +++ 
Sbjct: 320  TLIWTMLKKGPYGKPIIKRVLIVTPSSLCNNWEKEFVKW----LGRHRIFPYVIGGKNKP 375

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
             + +   R    + +I Y  F        +K      E+        D++VCDE H +KN
Sbjct: 376  KDFIKYPR--NSIMIISYEMF--------IKCHTEINEMTF------DLIVCDEGHRLKN 419

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
            +     + L ++ C++RI LTG+P+QN+L E+Y ++DFV  G LG+ +E+++ ++ PI  
Sbjct: 420  SNIKAAKMLNEINCKKRIVLTGTPIQNDLKEFYALIDFVNPGILGTPNEYKSYYEEPIIA 479

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
             Q++++  + + + N+RS  LY+  K F+ R     + K LP K   V+   L+  Q+ L
Sbjct: 480  AQYSSADDDVLSLGNERSAELYKHTKSFILRRSQKAINKYLPYKYEIVLFCSLTKKQKDL 539

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            Y    D      +++  E       +   AL +I NHP +                  + 
Sbjct: 540  YSLITDAWF---NKICLEDKSNIHLSIITALKKICNHPNLFL----------------NE 580

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
            +E   Y+V+       ++   Q K D+ F                  +Y GK+ ++  ++
Sbjct: 581  EEKALYDVL-----SKVSYLSQIKRDENF-----------------TEYCGKVTIVQTLM 618

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
                   +K ++ S    TLDL+E  +  + R             + RLDG T S+ R K
Sbjct: 619  RNLKKTDEKLVLVSYYTQTLDLLE-TICNMER-----------LKFLRLDGATSSTIRLK 666

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            + E+FN   +   K  L+S +AG +G+NL  A+R+++ D  WNP  D+QA+ R WR GQ 
Sbjct: 667  ITEQFNTQTDNS-KVLLLSAKAGGVGLNLPGASRLVLFDSDWNPASDMQAMARIWRDGQK 725

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV-HRTISKEEMLHLFEFGDD 1303
            + V+ YRL+  GT+EEKIY+RQ++K  L+  VVD   +    +S  E+  LF    D
Sbjct: 726  RNVYIYRLLTTGTIEEKIYQRQISKANLSETVVDLNYLGSLKLSTAELKDLFTLASD 782


>gi|301768186|ref|XP_002919520.1| PREDICTED: DNA repair and recombination protein RAD54-like
            [Ailuropoda melanoleuca]
          Length = 838

 Score =  262 bits (670), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 297/607 (48%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R+V       GCI+A  MGLGKT
Sbjct: 227  KEKLPVHVVVDPVLSKVLRPHQREGVKFLWECVTS--RRVPGSH---GCIMADEMGLGKT 281

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 282  LQCITLMWTLLRQSPECRPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 338

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 339  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 383

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 384  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHE 443

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 444  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 503

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +    L ++ NHP ++        
Sbjct: 504  CCRLTPLQTELYKRFLR-QAKPAEELREGKMSVSSLSSITLLKKLCNHPALI-------- 554

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D  +G  +   F   + +  L      E   
Sbjct: 555  ----------------YDKCVEEE-----DGFEGALE--IFPPGYSSKAL------EPQL 585

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 586  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 632

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN PL+      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 633  RLDGTMSIKKRAKVVERFNNPLSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 691

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +  V R  S  E
Sbjct: 692  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEPDVERHFSLGE 751

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 752  LKELFTL 758


>gi|118092751|ref|XP_421656.2| PREDICTED: DNA excision repair protein ERCC-6 [Gallus gallus]
          Length = 1495

 Score =  262 bits (670), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 183/604 (30%), Positives = 282/604 (46%), Gaps = 107/604 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            EE  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 489  EEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 538

Query: 771  AFL----YTAMRSVN-----LGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 539  AFLAGLSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWP----PFRVAILHE 594

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                 +++ +L+ +  +  G+ +  Y+  R +    H  D +               ++ 
Sbjct: 595  TGSYTNKKVKLIREIASCHGILITSYSYIRLMQDNIHSYDWHY--------------VIL 640

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DFV  G LG+   F  
Sbjct: 641  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFME 700

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 701  QFSVPITMGGYSNASPVQVKTAYKCACVLRDAINPYLLRRMKADVKMSLSLPDKNEQVLF 760

Query: 998  VKLSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
             +L+  QR++Y+ F+D   ++   N  +         F+G  AL +I NHP +       
Sbjct: 761  CRLTDEQRQVYQNFIDSKEVYQILNGDM-------QVFSGLVALRKICNHPDLFS----- 808

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
            G P        +  E  D                         Q  +W            
Sbjct: 809  GGPKILKCVPDADLEEAD-------------------------QFGYWK----------- 832

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGKM+++  +L +    G + L F+QS   L ++E +L              +   + 
Sbjct: 833  -RSGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFLR------------DRNYSYL 879

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            R+DG T  + RQ L+ R+NE  +K +   L++TR G +G+NL  A+RVII D  WNP+ D
Sbjct: 880  RMDGTTTIASRQPLITRYNE--DKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTD 937

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
             QA  RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++
Sbjct: 938  TQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDL 997

Query: 1295 LHLF 1298
              LF
Sbjct: 998  YELF 1001


>gi|195539537|ref|NP_001124238.1| DNA repair and recombination protein RAD54-like [Bos taurus]
 gi|119935983|gb|ABM06051.1| RAD54-like protein [Bos taurus]
 gi|296488837|tpg|DAA30950.1| TPA: RAD54-like [Bos taurus]
          Length = 749

 Score =  262 bits (669), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 189/605 (31%), Positives = 295/605 (48%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 137  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 191

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 192  LQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVGKWLGGRIQPLAI---DGGS 248

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 249  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 293

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ E
Sbjct: 294  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQE 353

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++ ED ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 354  FKKHFELPILKGRDAAASEEDRRVGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 413

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++    DK  
Sbjct: 414  CCRLTPLQIELYKRFLR-QAKPAEELREGKMSVSSLSSITSLKKLCNHPALIY---DKCV 469

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
               +  E +                  ++ F  G N                    E   
Sbjct: 470  EEEDGFEGT------------------LDIFPPGYNSKAL----------------EPQL 495

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 496  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 542

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 543  RLDGTMSIKKRAKVVERFNNPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 601

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 602  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 661

Query: 1294 MLHLF 1298
            +  LF
Sbjct: 662  LKELF 666


>gi|308807292|ref|XP_003080957.1| DNA repair protein RAD54-like (ISS) [Ostreococcus tauri]
 gi|116059418|emb|CAL55125.1| DNA repair protein RAD54-like (ISS), partial [Ostreococcus tauri]
          Length = 816

 Score =  262 bits (669), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 184/583 (31%), Positives = 278/583 (47%), Gaps = 60/583 (10%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++FM+E ++  +R       G GCILA  MGLGKT Q I  L+T ++    G
Sbjct: 186  LRPHQREGVQFMFECVM-GLRDFD----GTGCILADDMGLGKTLQGITLLWTLLKQGFDG 240

Query: 784  ---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGV 840
               ++ ALIV P +++ NW  E  KW    +K L +            ++    R    V
Sbjct: 241  APAVKRALIVCPTSLVSNWDDECNKWLKGRVKTLPICDSTRAEVVSSIKMFLAPRHVAQV 300

Query: 841  FLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADTTQALKQV 899
             ++ Y  FR      H +  N          DG  D+++CDEAH +KN    T +AL  V
Sbjct: 301  MIVSYETFR-----IHSERFNF---------DGAVDLIMCDEAHRLKNGETLTNKALCAV 346

Query: 900  KCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVK 959
             C RR+ L+G+P+QN+L E+Y MV F   G LG+  EF  +++ PI  G+   +T ++++
Sbjct: 347  PCLRRVMLSGTPMQNHLDEFYAMVSFCNPGLLGTPSEFSKKYERPILAGREPYATEKELE 406

Query: 960  IMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTN 1019
                 +  L E +  F+ R    ++ K LPPK V V+  KLSPLQ+ LY+ FL     T 
Sbjct: 407  RAQMANTDLSELVNKFILRRTNTILSKHLPPKVVEVVCCKLSPLQQALYEHFLTSKAATQ 466

Query: 1020 DRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGE 1079
                      +      AL ++ NHP ++       +     A+++ S     +N     
Sbjct: 467  ALTGKA---TAVLPAINALKKLVNHPKLI-------FDMINGAKNTGSAAANGFNTCAEF 516

Query: 1080 KPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSL 1138
                M      +   G     W      EH       SGK  +L  +L  + S   D+ +
Sbjct: 517  FEPGMYGGGTSRRGGGRMCPGW-----EEH-------SGKFAVLARLLANLRSETKDRIV 564

Query: 1139 VFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNK 1198
            + S    TLDLI     +   P            + RLDG T   +RQKLV+ FN+P + 
Sbjct: 565  IISNYTQTLDLIAQMCIERHYP------------FVRLDGGTTIGKRQKLVKEFNDPTSN 612

Query: 1199 RVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAH 1258
                 L+S++AG  GINL   NR+++ D  WNP  D QA  R WR GQ K  + YR +A 
Sbjct: 613  SF-VFLLSSKAGGCGINLIGGNRLVLFDPDWNPANDKQAAARCWRDGQKKKCYLYRFLAA 671

Query: 1259 GTMEEKIYKRQVTKEGLAARVVDRQQVHRTI-SKEEMLHLFEF 1300
            GT+EEK+++RQ++KE L   V    ++ + + S +E+  LF  
Sbjct: 672  GTIEEKVFQRQLSKESLQNVVNGSGELEQAVMSTDELRKLFSL 714


>gi|201066350|ref|NP_001128432.1| DNA repair and recombination protein RAD54-like [Rattus norvegicus]
 gi|197246624|gb|AAI69034.1| Rad54l protein [Rattus norvegicus]
          Length = 748

 Score =  262 bits (669), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 188/602 (31%), Positives = 295/602 (49%), Gaps = 82/602 (13%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +       
Sbjct: 191  LQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDE 250

Query: 824  RDRRAELLAKWRA---KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG-PDILVC 879
             DR+ E     R       + +I Y  FR      HV+           L+ G   +++C
Sbjct: 251  IDRKLEGFMNQRGARVPSPILIISYETFR-----LHVE----------VLKKGNVGLVIC 295

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HEF+ 
Sbjct: 296  DEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKK 355

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
             F+ PI   +   ++  D ++  +R   L   +   + R   +++ K LP K   V+  +
Sbjct: 356  HFELPILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCR 415

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR 1059
            L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++           
Sbjct: 416  LTPLQTELYKRFLR-QAKPEEELHEGKMSVSSLSSITSLKKLCNHPALI----------- 463

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
                         Y+  + E+     D  +G    G F   + +  +      E   SGK
Sbjct: 464  -------------YDKCVAEE-----DGFEGTL--GIFPPGYNSKAV------EPQLSGK 497

Query: 1120 MVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLD 1177
            M++L  IL M  S   DK ++ S    TLDL E             KL +  +  Y RLD
Sbjct: 498  MLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYVRLD 544

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA
Sbjct: 545  GTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQA 603

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLH 1296
            + R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E+  
Sbjct: 604  MARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKE 663

Query: 1297 LF 1298
            LF
Sbjct: 664  LF 665


>gi|343424755|emb|CBQ68293.1| related to RAD54-DNA-dependent ATPase of the Snf2p family
            [Sporisorium reilianum SRZ2]
          Length = 1065

 Score =  262 bits (669), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 184/624 (29%), Positives = 299/624 (47%), Gaps = 93/624 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR- 778
            ++  L+ HQV G++F++E ++        G+KG G ILA  MGLGKT Q IA + T M+ 
Sbjct: 338  LTKALRPHQVEGVKFLYERVMG---MHADGEKGQGAILADEMGLGKTLQTIALVLTLMKQ 394

Query: 779  -----SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK 833
                 S +  +   +IV P+ ++ NWK+EF KW  +    L V  ++D       E   +
Sbjct: 395  SCYYTSKSCTIERTMIVCPLTLVKNWKREFNKWIGTN--SLNVLCIDDGRGRDDVERFVR 452

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
             +A   V +IGY   R+              +I    Q   D++VCDE H +K+  A TT
Sbjct: 453  SKAYH-VLVIGYEKLRSCI------------DIVKTAQPPIDLIVCDEGHRLKSKDAQTT 499

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            Q   ++  +R+I L+G+P+QNNL E Y M+DFV  G L +   F+  F+ PI   +  + 
Sbjct: 500  QMFAELSTKRKIILSGTPIQNNLSELYAMIDFVVPGLLVNPEAFKTMFEEPILRSRAKHC 559

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL- 1012
            + +       R + L    K  + R   +++ K LPPK   V+    S  Q R+Y+  L 
Sbjct: 560  SKQTKATGQARLNALMTITKDVILRRTADILTKFLPPKKEMVLFCSPSQEQIRIYQSILG 619

Query: 1013 --DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
              D+         N  ++         L ++ N P +L              +D+ S  +
Sbjct: 620  SSDVRSLLRGDAGNGLLQ------IGVLRKLCNTPELL-------------LKDTESSAD 660

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TM 1129
                 ++G+  R             FF  ++  +        E  +SGK+  ++D+L T+
Sbjct: 661  SATKALVGDLTR-------------FFPPNFVRN--------EARFSGKLTCVMDLLQTV 699

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
             +   DK ++ S    TLD++E              + KK   + RLDG+T   ER  +V
Sbjct: 700  RAQTDDKVVLVSNFTSTLDIVE------------AMMRKKRYPYLRLDGKTPQDERMLMV 747

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
             +FN          L+S ++G +G+NL  ANR++++D  WNP+ DLQA+ R  R GQ KP
Sbjct: 748  NQFNREGVDNSFVFLLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQRKP 807

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLFEFGDDENPD 1307
             + YRL+  GTM+EKIY+RQ++K GL+  +++  ++    T S+EE+  +F    D    
Sbjct: 808  CYIYRLLLSGTMDEKIYQRQISKLGLSDSLMNAEKKSASDTFSQEELRDIFTLHLDS--- 864

Query: 1308 PLTAVSKE------NGQGSSQNTN 1325
              T +S        +G+G S N+N
Sbjct: 865  --TCISHRQLLCDCDGKGGSANSN 886


>gi|449547038|gb|EMD38006.1| DNA repair protein SNF2 family [Ceriporiopsis subvermispora B]
          Length = 814

 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 193/617 (31%), Positives = 307/617 (49%), Gaps = 90/617 (14%)

Query: 707  REKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAH 759
            +EK ++  ++P  I  +L    + HQV G++F++        K  +G   D   GCI+A 
Sbjct: 200  KEKKKQNNKVPVVIDPRLSKVLRPHQVEGVKFLY--------KCTTGMMVDNQYGCIMAD 251

Query: 760  TMGLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTPVNVLHNWKQEFMKWRPSELKPLR 815
             MGLGKT Q IA ++T ++      R  +    I  P +++ NW  E  KW    L    
Sbjct: 252  EMGLGKTLQCIALMWTLLKQSPHASRPTIDKCIIACPASLVKNWANELAKW----LGKDT 307

Query: 816  VFMLEDVSRDRRAELL---AKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
            +  L    +  +AE+L   A+W A  G         RN+S    +      R +   LQ+
Sbjct: 308  ISALAIDGKGGKAEMLERVARWVAASG---------RNVSQPVMIVSYETLRTLAAHLQN 358

Query: 873  GP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             P  +L+CDE H +KN+ + T Q L ++  +RR+ L+G+P+QN+L EY+ +++F    FL
Sbjct: 359  CPIGLLLCDEGHRLKNSESQTFQVLNELNVKRRVILSGTPIQNDLSEYFSLLNFANPNFL 418

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS ++FR  F+N I  G+  +++       +++   L + +  F+ R   +++ K LP K
Sbjct: 419  GSKNDFRKNFENAIIRGRDADASDAIKAACDKKLKELGDLVTKFIIRRTNDLLSKYLPVK 478

Query: 992  TVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
               V+   LSPLQ  LY+ F+   ++      R ++ +  K+       L ++ NHP +L
Sbjct: 479  YEQVVFCGLSPLQLSLYRLFISSPEIQALL--RGTDSQPLKAI----NILKKLCNHPELL 532

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
             L  D             SD+ +    +             G N  G   +   N ++H 
Sbjct: 533  DLPGDL----------RGSDKLLPEEYIGA-----------GANAKG---RGGRNQVVH- 567

Query: 1109 HTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
                  ++SGK V+L   L  + +   DK ++ S    TLDL E    KL R        
Sbjct: 568  -----CEWSGKFVVLERFLHRIRTETNDKIVLISNYTQTLDLFE----KLLR-------- 610

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
             KG  ++RLDG    ++RQKLV++FN P  K     L+S++AG  GINL  ANR+I+ D 
Sbjct: 611  TKGYGYFRLDGTMTINKRQKLVDQFNNPEGKEF-IFLLSSKAGGCGINLIGANRLILFDP 669

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVH 1286
             WNP  D QA+ R WR GQ K  F YR +  GT+EEKI++RQ +K+ L++ VVD ++ V 
Sbjct: 670  DWNPAADQQALARVWRDGQKKECFVYRFITTGTIEEKIFQRQASKQSLSSAVVDEKEDVE 729

Query: 1287 RTISKEEMLHLFEFGDD 1303
            R  S + +  LF F ++
Sbjct: 730  RHFSIDSLRKLFLFNEN 746


>gi|391327035|ref|XP_003738014.1| PREDICTED: DNA excision repair protein ERCC-6-like [Metaseiulus
            occidentalis]
          Length = 1213

 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 189/619 (30%), Positives = 293/619 (47%), Gaps = 109/619 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  R+P+S+  KL  +Q   ++++WE     + + K G      I+   MGLGKT Q I
Sbjct: 349  DEDFRMPTSLWNKLYKYQQTCVKWLWE-----LHQFKCG-----GIIGDEMGLGKTIQAI 398

Query: 771  AFLYTAMRSVNL--------GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED- 821
            AFL   +R  N         GL   ++VTP  V+H W +EF KW P +    RV +L + 
Sbjct: 399  AFL-RGLRHSNTKLPGEAFRGLGPIILVTPATVMHQWVKEFHKWFPRQ----RVGVLHNS 453

Query: 822  --VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
               S  +++ L+ +  +  G  +  Y        G  +   ++     H        ++ 
Sbjct: 454  GSYSGRKKSTLIDEIHSSKGTLITSYQ-------GIVMYQDDLIHHHWH-------YIIL 499

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A+KQ +   R+ L+GSP+QNNL E + + DFV  G LG+   F  
Sbjct: 500  DEGHKIRNPDAQATLAVKQFRTPHRLILSGSPIQNNLRELWSLFDFVFPGKLGTLPVFMA 559

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK--DLPPKTVFVIT 997
             F  PI +G + N+T   V +  + + IL + +K ++ R   + VK   +LPPK+  VI 
Sbjct: 560  EFAVPITHGGYANATETQVAVGYRCATILRDTIKPYLLRRMKSDVKTSINLPPKSEQVIF 619

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKI---RKSFFAGYQALAQIWNHPGILQLTKDK 1054
             KL+  QR LY+ +++ H         +KI   R   F G   L +I NHP +       
Sbjct: 620  CKLTERQRDLYREYVESHEV-------KKILDGRMQIFVGLVNLRKICNHPDLY------ 666

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                         D   D +++   +    + F       GF+++               
Sbjct: 667  -------------DGGPDKDIITSSRKVPSSSF-------GFYKR--------------- 691

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGK++++  +L + S    + L+F+QS   L ++E ++              +   + 
Sbjct: 692  --SGKLMVVEALLKLWSKQKQRVLLFTQSRQMLRILEEFVQN------------RHYTYL 737

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
             +DG T  S RQ  ++RFN+  +  +   L++TR G LG+NL  ANRVII D  WNP+ D
Sbjct: 738  SMDGSTAISTRQPAIDRFNQ--DSSIFIFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTD 795

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            +QA  RAWR GQ K V  YRLM  GT+EEKIY RQ+ K+ L  RV+   +  R     EM
Sbjct: 796  MQARERAWRIGQQKDVTVYRLMTAGTIEEKIYHRQIFKQFLTNRVLKNPKQRRFFKTNEM 855

Query: 1295 LHLFEFGDDENPDPLTAVS 1313
              LF   +D + +  T  S
Sbjct: 856  YELFTLSEDVHKEERTETS 874


>gi|296814920|ref|XP_002847797.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
            113480]
 gi|238840822|gb|EEQ30484.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
            113480]
          Length = 819

 Score =  261 bits (668), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 198/644 (30%), Positives = 303/644 (47%), Gaps = 97/644 (15%)

Query: 680  TLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENI 739
            TLD  L   +  E+LG      I   V E+ +  V I   ++  L+ HQ+ G++F++   
Sbjct: 188  TLDQPLVHKSLAEILG------IKKKVDERPKVPVVIDPRLAKILRPHQIEGVKFLYRCT 241

Query: 740  IQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLGLRT---ALIVTPVNV 795
               + K  SG     CI+A  MGLGKT Q I  ++T ++ S   G  T   A+I  P  +
Sbjct: 242  TGLVDKNASG-----CIMADGMGLGKTLQCITLMWTLLKQSPEAGKSTVQKAVIACPATL 296

Query: 796  LHNWKQEFMKWRPSELKPLRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAF 848
            + NW  E +KW   +   +  F+++   S+      L +W    G      V ++ Y   
Sbjct: 297  VGNWANELVKWLGKDA--INPFVIDGKASKTELISQLRQWAIASGRSVVRPVLIVSYETL 354

Query: 849  RNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALT 908
            R  S    ++D  +             +L+CDE H +KN  + T  AL ++  Q+R+ L+
Sbjct: 355  RMNS--DELRDTQIG------------LLLCDEGHRLKNADSQTYVALNKLNVQKRVILS 400

Query: 909  GSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHIL 968
            G+P+QN+L EY+ ++DF   G LGS  EF   ++ PI  G+  + T E  K  N+R   L
Sbjct: 401  GTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGTEEQQKKGNERLAEL 460

Query: 969  YEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNE 1025
               +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   ++      + S  
Sbjct: 461  LNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQSPEIKSLLRGKGSQP 520

Query: 1026 KIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMN 1085
                        L ++ NHP +L+L++D     +   ED +S                  
Sbjct: 521  ------LKAIGILKKLCNHPDLLKLSEDLPGCEKYFPEDMASS----------------- 557

Query: 1086 DFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSI 1144
                G+  D    K W              YSGKM++L  +L  +  +  DK ++ S   
Sbjct: 558  ---NGRRGDREV-KSW--------------YSGKMMVLDRMLARIRQDTNDKIVLISNYT 599

Query: 1145 PTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTL 1204
             TLDL E    +L R         +G    RLDG     +R KLV+RFN+P N      L
Sbjct: 600  QTLDLFE----RLCR--------SRGYGCIRLDGTMGVKKRSKLVDRFNDP-NGEEFVFL 646

Query: 1205 ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEK 1264
            +S++AG  GINL  ANR+++ D  WNP  D QA+ R WR GQ+K  F YR +A GT+EEK
Sbjct: 647  LSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEK 706

Query: 1265 IYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            I++RQ  K+ L++ VVD  + V R  S + +  LF+F  D   D
Sbjct: 707  IFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPDTTSD 750


>gi|354465787|ref|XP_003495358.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cricetulus
            griseus]
          Length = 1478

 Score =  261 bits (668), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 191/637 (29%), Positives = 292/637 (45%), Gaps = 103/637 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 487  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 536

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 537  AFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHMWWP----PFRVAILHE 592

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                  ++  L+       GV +  Y+  R       +   +++R   H        ++ 
Sbjct: 593  TGSYAHKKERLVRDIVHCHGVLITSYSYIR-------LMQDDISRHDWH-------YVIL 638

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 639  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 698

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 699  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 758

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +     F+G  AL +I NHP +          
Sbjct: 759  CRLTDEQHKVYQNFIDSKEVY--RILNGE--NQIFSGLVALRKICNHPDLF--------- 805

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   P+N++   +              D L E  +     S
Sbjct: 806  --------------------SGGPKNLSGLPE--------------DELEEDQFGYWKRS 831

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   L ++E +L    R  K   L        ++D
Sbjct: 832  GKMIVVESLLKIWHKQGQRVLLFSQSRQMLHILEVFL----RAHKYSYL--------KMD 879

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ ++NE  +  +   L++TR G +G+NL  ANRVII D  WNP+ D QA
Sbjct: 880  GTTTIASRQPLITKYNE--DTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQA 937

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 938  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 997

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKLP 1333
            F     +        +   G GS  Q   C  K K P
Sbjct: 998  FTLSSPDASQSTETSAIFAGTGSDVQTPKCHFKKKTP 1034


>gi|340376710|ref|XP_003386875.1| PREDICTED: DNA repair protein rhp26-like [Amphimedon queenslandica]
          Length = 1230

 Score =  261 bits (668), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 187/600 (31%), Positives = 280/600 (46%), Gaps = 106/600 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+  R+PSSI  KL  +Q  G++++WE   Q            G I+   MGLGKT ++I
Sbjct: 344  EDGFRVPSSIWHKLYRYQQTGVKWLWELHSQQA----------GGIMGDEMGLGKTIEMI 393

Query: 771  AFL----YTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             FL     + +RS     LGL   L+V P  VLH W  EF  W P    P RV +L D  
Sbjct: 394  GFLAGLKISNVRSHVTRELGLGPILVVCPATVLHQWVHEFHSWYP----PFRVAILHDTG 449

Query: 824  R--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 881
                 +A LL +  +  GV +  Y + R            +  ++   L+   + ++ DE
Sbjct: 450  SYGGSKASLLKRMVSANGVIVTTYASVR------------LQTDLL--LRHQWEYVILDE 495

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
             H I+N  AD T A KQ     RI L+GSP+QNNL E + + DFV  G LG+   F  +F
Sbjct: 496  GHKIRNPDADITLACKQFPTPHRIILSGSPVQNNLKELWSLFDFVYPGKLGTLPVFLEQF 555

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
              PI  G + +++   V+   + + IL + +  ++ R   + VK  LP K   V+  +L+
Sbjct: 556  SVPITLGGYAHASQTQVETAYRCACILRDTINPYLLRRLKSDVKLQLPNKNEQVLFCRLT 615

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
              QR LY+ ++       +  +  +  K  F+G   L ++ NHP ++            D
Sbjct: 616  DYQRELYEEYIK----GPEVEAMMRGGKQIFSGLMTLRKLCNHPDLVA-------GGVRD 664

Query: 1062 AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 1121
            +E+ S                            GF+++                 SGKM+
Sbjct: 665  SEEESY---------------------------GFWRR-----------------SGKMI 680

Query: 1122 LLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            ++  +L M      K L+FSQS   L ++E +            L      + R+DG T 
Sbjct: 681  VIESLLKMWLGQKHKILLFSQSRQMLYILEKF------------LISNSYTYLRMDGTTS 728

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
               RQKL++ FNE  +  +   L++TR G LG+NL  A+RV+I D  WNP+ D QA  RA
Sbjct: 729  IGARQKLIKDFNE--DPSIFVFLLTTRVGGLGVNLTGADRVLIYDPDWNPSTDTQARERA 786

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFG 1301
            WR GQTKPV  YRL+  GT+EEK+Y RQ+ K+ L  RV+   +  R     ++  LF  G
Sbjct: 787  WRIGQTKPVTIYRLLTGGTIEEKVYHRQIFKQFLTNRVLRDPRQRRFFKSNDLYELFTLG 846


>gi|403399531|sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombination protein RAD54;
            Short=OsRad54
 gi|144369229|dbj|BAF56217.1| OsRad54 [Oryza sativa Japonica Group]
          Length = 980

 Score =  261 bits (668), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 185/605 (30%), Positives = 307/605 (50%), Gaps = 82/605 (13%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL-GCILAHTMGLGKTFQVIA 771
            A+++   +   L+ HQ  G++FM++ +   +      D G+ GCILA  MGLGKT Q I 
Sbjct: 224  AIKVDHLLVRYLRPHQREGVQFMFDCVSGLL-----NDDGISGCILADDMGLGKTLQSIT 278

Query: 772  FLYTAM---RSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 828
             LYT +         ++ A++VTP +++ NW+ E +KW    ++      L  +    RA
Sbjct: 279  LLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQ------LLALCESTRA 332

Query: 829  ELLA------KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
            ++L+      K  ++  V ++ Y  FR       +      R          D+L+CDEA
Sbjct: 333  DVLSGIESFLKPLSRLQVLIVSYETFR-------MHSSKFERP------GSCDLLICDEA 379

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN +  T +AL  + C+RRI L+G+P+QN+L E++ MV+F   G LG +  FR  ++
Sbjct: 380  HRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYE 439

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
             PI  G+   +++E+  + ++RS  L  ++  F+ R    ++   LPPK V V+  KL+ 
Sbjct: 440  APIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTA 499

Query: 1003 LQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSRED 1061
            LQ  LY  F  +H     R+ +E  ++S    Y  AL ++ NHP ++            D
Sbjct: 500  LQTALYNHF--IHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLIY-----------D 546

Query: 1062 AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 1121
               S++     ++  +   P    +   G++         W +L           SGKM 
Sbjct: 547  TIKSNNSGGSGFDDCLRFFP---PELFSGRSGSWTGGGGMWVEL-----------SGKMH 592

Query: 1122 LLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT 1180
            +L  +L  +     D+ ++ S    TLDL     ++L R        ++   + RLDG T
Sbjct: 593  VLARLLGHLRLKTDDRIVLVSNYTQTLDL----FAQLCR--------ERRYPYIRLDGAT 640

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
              ++RQKLV +FN+P ++     L+S++AG  G+NL   NR+I+ D  WNP  D QA  R
Sbjct: 641  SINKRQKLVNQFNDP-SRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQAAAR 699

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH-----RTISKEEML 1295
             WR GQ K V+ YR ++ GT+EEK+Y+RQ++KEGL  +V+ ++Q        ++S E++ 
Sbjct: 700  VWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQADGKMQGSSLSTEDLR 758

Query: 1296 HLFEF 1300
             LF F
Sbjct: 759  DLFTF 763


>gi|66361996|ref|XP_627962.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II]
 gi|46227534|gb|EAK88469.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II]
          Length = 877

 Score =  261 bits (668), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 192/636 (30%), Positives = 298/636 (46%), Gaps = 89/636 (13%)

Query: 698  ITGYIVNVVREKGEE-AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCI 756
            +   I+ +  E GE+  + + S ++  L+ HQ  G+ F++E  +  +R       G GCI
Sbjct: 110  VNPLILWISSEDGEKRVIEVDSMLTKWLREHQRQGVTFIFE-CLMGLRDFD----GNGCI 164

Query: 757  LAHTMGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            LA  MGLGKT Q I  L+T +     G   +R A++V P +++ NW  E  KW   + K 
Sbjct: 165  LADDMGLGKTLQSITILWTLLNQGFDGKPSVRKAVVVCPASLVKNWASEIEKWLQGKCKC 224

Query: 814  LRVFMLEDVSRDRRAELLA----KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA 869
              V       RDR   + A    K+     + +  Y  FR      HV+           
Sbjct: 225  TPV-----AERDREKVVSAFAGFKYDTMSRILIASYETFR-----MHVEQ---------- 264

Query: 870  LQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
            L   P D+++CDEAH +KN +  T  A+  +  ++R+ L+G+P+QN+L+E+Y +V     
Sbjct: 265  LDGVPIDLVICDEAHRLKNDKTKTAMAINNLPAKKRLLLSGTPIQNDLVEFYSLVSLANP 324

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
              LG   +F+  + NPI  G+  +++    ++  QR   L      F+ R    ++ K L
Sbjct: 325  QVLGDVSQFKKIYANPILEGREPDASEYQQELATQRLQELSNITNHFILRRANTLLAKVL 384

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHG----FTNDRVSNEK-IRKSFFAGYQALAQIWN 1043
            PPK +  I   L+P+Q  LY+RFL          +D   N   +     +  Q+L ++ N
Sbjct: 385  PPKIILNIFCNLTPIQNYLYRRFLRSSACKKLLDSDSTGNPTGLTGQVLSSIQSLMKLCN 444

Query: 1044 HPGILQLTKDKGYPSREDAEDS----------SSDENMDYN--VVIGEKPRNMNDFLQGK 1091
            HP +++     GY    +  +           S +   +Y   V IG   RN        
Sbjct: 445  HPTLIRPKTSGGYGKGFEGSEKYLEMIHGRSVSGESGGEYKKRVTIGSSIRN-------S 497

Query: 1092 NDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLI 1150
            N  GF  K               + SGK+ LL  +L  + SN  D+ ++ S    TLD+ 
Sbjct: 498  NRTGFSSKP--------------NLSGKLYLLSRLLFHIRSNTKDRVVLVSNYTQTLDVF 543

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E     L  P              RLDG T  + R  LV+ FN+P N      L+S++AG
Sbjct: 544  ECLCRDLQVP------------CVRLDGSTSITRRHNLVKTFNDP-NSNSFAFLLSSKAG 590

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
              GINL  ANR+++ D  WNP  D QA+ R WR GQ K  + YRL + GT+EEKIY+RQ+
Sbjct: 591  GCGINLIGANRLVMFDPDWNPANDKQALARVWRDGQKKNCYIYRLFSTGTIEEKIYQRQL 650

Query: 1271 TKEGLAARVVD---RQQVHRTISKEEMLHLFEFGDD 1303
             K+GL+A +V      ++  +IS + +  LF   +D
Sbjct: 651  CKDGLSAMLVTSGGNNELKDSISADLVRDLFTLKED 686


>gi|302883714|ref|XP_003040756.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
 gi|256721646|gb|EEU35043.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
          Length = 805

 Score =  261 bits (668), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 194/622 (31%), Positives = 299/622 (48%), Gaps = 101/622 (16%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++   E  R+P  I  KL    + HQV G++FM+  +   I      +K  GCI+
Sbjct: 190  ILGIKKKVDGEHPRVPVVIDPKLAKILRPHQVEGVKFMYRCVTGMI-----DEKANGCIM 244

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q I+ ++T ++ S   G   ++ A++V P +++ NW  E +KW  +    
Sbjct: 245  ADEMGLGKTLQCISLMWTLLKQSPEAGKSTIQKAIVVCPASLVKNWANELVKWLGANA-- 302

Query: 814  LRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFR-NLSFGKHVKDRNMARE 865
            +  F ++   S++     L +W    G      V ++ Y   R N+   KH K       
Sbjct: 303  IHPFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI------ 356

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
                      +L CDE H +KN  ++T  AL  +   RR+ LTG+P+QN+L EY+ +  F
Sbjct: 357  ---------GLLFCDEGHRLKNGDSNTFNALNSLNVTRRVILTGTPIQNDLTEYFSLTSF 407

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
                 LG+  EFR RF+ PI  G+  +++  D K  ++ +  L   +  F+ R   +++ 
Sbjct: 408  ANPNLLGTRQEFRKRFEIPILRGRDADASEADRKKGDECTGELLSVVNKFLIRRTNDILS 467

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            K LP K   V+   L+P Q  LY  F+   D+      + S              L ++ 
Sbjct: 468  KYLPVKYEHVVFCNLAPFQFDLYNYFIKSPDIQALLRGKGSQP------LKAINILKKLC 521

Query: 1043 NHPGILQLTKDKGYPSRED--AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD 1100
            NHP +L L+ D   P  E    ED    E+                  +G++ +    K 
Sbjct: 522  NHPDLLNLSDD--LPGSEGCCPEDFVPKES------------------RGRDRE---VKS 558

Query: 1101 WWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            W              YSGKM +L  +L  +  +  DK ++ S    TLDL E    +L R
Sbjct: 559  W--------------YSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFE----RLCR 600

Query: 1160 PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
              + G L        RLDG    ++RQKLV+RFN+P N      L+S++AG  GINL  A
Sbjct: 601  SRQYGCL--------RLDGTMNVNKRQKLVDRFNDP-NGDEFVFLLSSKAGGCGINLIGA 651

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NR+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ V
Sbjct: 652  NRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV 711

Query: 1280 VDR-QQVHRTISKEEMLHLFEF 1300
            VD  + V R  S + +  LF++
Sbjct: 712  VDSAEDVERHFSLDSLRELFQY 733


>gi|125833380|ref|XP_688972.2| PREDICTED: DNA excision repair protein ERCC-6 [Danio rerio]
          Length = 1390

 Score =  261 bits (668), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 194/667 (29%), Positives = 302/667 (45%), Gaps = 110/667 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  +IP  +  KL  +Q  G+R+MWE   Q            G IL   MGLGKT Q+I
Sbjct: 471  DEGFKIPGFLWKKLFKYQQTGVRWMWELHCQQA----------GGILGDEMGLGKTIQII 520

Query: 771  AFL----YTAMRSVN-----LGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +++        GL   +IV P  V+H W +EF  W P    P RV +L D
Sbjct: 521  AFLAGLSYSKLKTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWP----PFRVAVLHD 576

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                  ++ +L+ +  A  G+ +  Y+  R       +    + R   H        ++ 
Sbjct: 577  TGSFTSKKEKLIPEIVASHGILITSYSYIR-------IMQDYIQRYDWH-------YVIL 622

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   R  L+GSP+QNNL E + + DFV  G LG+   F  
Sbjct: 623  DEGHKIRNPNAGVTTACKQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFME 682

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G + N++   V+   + + +L + +  + ++RM  +V     LP K   V+ 
Sbjct: 683  QFSVPITMGGYANASPVQVQTAYKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLF 742

Query: 998  VKLSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
             +L+  QR++Y+ FLD   ++   N  +         F+G  AL +I NHP +       
Sbjct: 743  CRLTEDQRQVYQTFLDSKEVYQILNGDM-------QVFSGLIALRKICNHPDLFT----- 790

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
            G P                              L+G   D          L  E  +   
Sbjct: 791  GGPR----------------------------LLRGIPHD---------QLTEEEHFGYW 813

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGKM+++  +L +    G + L+F+QS   L+++E ++             + G  + 
Sbjct: 814  KRSGKMIVVESLLRLWHKQGHRVLLFTQSRQMLEILEVFVK------------ENGFSYL 861

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            ++DG T  + RQ L+ +FN+  NK +   +++TR G LG+NL  ANRV+I D  WNP+ D
Sbjct: 862  KMDGTTTIASRQPLIAQFNQ--NKDIFVFILTTRVGGLGVNLTGANRVVIYDPDWNPSTD 919

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
             QA  RAWR GQ + V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++
Sbjct: 920  TQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDI 979

Query: 1295 LHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCS-DKLMESLLGKHHP 1353
              LF     +        +   G GS  +     +HK     +G +   L  S    +  
Sbjct: 980  YELFTLSSPDGSQGTETSAIFAGTGS--DVQVPKRHKTSSPSQGTTRPSLSHSTDSGNRN 1037

Query: 1354 RCAVNGI 1360
              +VNG+
Sbjct: 1038 TTSVNGL 1044


>gi|17538806|ref|NP_501545.1| Protein RAD-26 [Caenorhabditis elegans]
 gi|3874525|emb|CAA90984.1| Protein RAD-26 [Caenorhabditis elegans]
          Length = 1274

 Score =  261 bits (668), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 148/401 (36%), Positives = 220/401 (54%), Gaps = 59/401 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN    + +  + + S ++  L+ HQ+ GIRFM++N I+S+ + K  D G GCILAH+M
Sbjct: 234  LVNAGHPEEDPDIFVISHLTHVLQPHQLGGIRFMYDNTIESLGEYKKSD-GFGCILAHSM 292

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ELKPLR 815
            GLGKT QVI F    +R+     +  L++ P+N + NW  E+ KW P        ++   
Sbjct: 293  GLGKTIQVITFSEIFLRATKA--KKVLVIVPINTIQNWYSEYDKWIPKFSDTGDRIRSFE 350

Query: 816  VFMLEDVSR--DRRAELLAKWRAKGGVFLIGYTAFR------------------NLS--- 852
            VF+L D  +  D+R  L+ +W   GGV L+GY  FR                  NLS   
Sbjct: 351  VFLLGDGVKTFDQRVNLIEQWDQTGGVMLVGYDMFRLLIKMTLPKKQKKGRPKLNLSGIS 410

Query: 853  --FGK------HVKDRNMAREICHA-----------------LQDGPDILVCDEAHMIKN 887
              F K       ++D  +  E                     L+ GPD++VCDE H IKN
Sbjct: 411  SGFSKDSSEDQKLRDEELEFETGFTSGGRVRQEAYSLIRSALLEPGPDLVVCDEGHKIKN 470

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
              A+ +  L  +  +RRI LTG PLQNNL+EY+CM+DFVR  +LG+   F +RF+ PI+N
Sbjct: 471  ITAEISMTLGAINTKRRIVLTGYPLQNNLLEYFCMIDFVRPKYLGTRKSFIDRFEKPIKN 530

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            GQ  +S+ +DVKI  QR+H+L E +KGFVQR   +++KK LP    +V+ ++ S +QR+L
Sbjct: 531  GQCVDSSPDDVKIALQRTHVLVELVKGFVQRRTHHLLKKILPESKEYVLLLRKSQIQRQL 590

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            Y+ F+ L        +N+ +     A + A ++IWNHP IL
Sbjct: 591  YRNFV-LWAKNEIAANNDAVFNPLMA-FSACSKIWNHPDIL 629



 Score =  171 bits (433), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 8/213 (3%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW  +L  ++    L+   K+V+ L+IL   + +G+K L+FSQ++  LD++E  L K   
Sbjct: 759  DWTFELFEKYQEGVLENGYKIVISLEILDESTQIGEKILIFSQNLTALDMLEEILKKRQI 818

Query: 1160 PGK--QGKLWKKGKDWYRLDGRTESSERQKLVERFN-EPLNKRVKCTLISTRAGSLGINL 1216
             GK   G+ W+K +++ RLDG T  ++R+KL+ RFN EP    +   LISTRAGSLGINL
Sbjct: 819  RGKDGPGQRWEKNRNYLRLDGTTSGADREKLINRFNSEP---GLSLFLISTRAGSLGINL 875

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
             SANR II+D  WNP +D QA+ R +RYGQ K  F YRL+   +ME  I+ RQ++K GL 
Sbjct: 876  VSANRCIIIDACWNPCHDAQAVCRVYRYGQQKKTFVYRLIMDNSMERSIFNRQISKHGLQ 935

Query: 1277 ARVVDRQQVHRTISKEEM--LHLFEFGDDENPD 1307
             RVVD  QV   IS++E+  L +++   D N D
Sbjct: 936  QRVVDDAQVDANISQKELETLLMYDEAQDVNHD 968


>gi|71019185|ref|XP_759823.1| hypothetical protein UM03676.1 [Ustilago maydis 521]
 gi|46099621|gb|EAK84854.1| hypothetical protein UM03676.1 [Ustilago maydis 521]
          Length = 1060

 Score =  261 bits (668), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 178/591 (30%), Positives = 291/591 (49%), Gaps = 78/591 (13%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR- 778
            ++  L+ HQV G++F++E ++        G KG G ILA  MGLGKT Q IA + T ++ 
Sbjct: 333  LTKALRPHQVEGVKFLYERVMG---MHADGTKGKGAILADEMGLGKTLQTIALILTLIKQ 389

Query: 779  -----SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML-EDVSRDRRAELLA 832
                 S +  +  A+IV P+ ++ NWK+EF KW  S    L V  + ED  R+   E  A
Sbjct: 390  SCYYTSKSSTIERAMIVCPLTLVKNWKREFRKWIGSN--SLNVLCIDEDCGREH-VERFA 446

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
            + +A   V +IGY   R+              +I    Q   D++VCDE H +K+  A T
Sbjct: 447  RSKAYH-VMVIGYEKLRS------------CIDIVKTAQPPVDLIVCDEGHRLKSKDAQT 493

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
            T+   ++  +R+I L+G+P+QNNL E Y M+DFV    LG    F+  F+ PI   +  +
Sbjct: 494  TKMFDELSTERKIILSGTPIQNNLSELYAMIDFVIPDLLGKPESFKTLFEEPILRSRAKH 553

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ++     +   R   L    K  + R   +++ K LPPK   V+    S  Q R+Y+  L
Sbjct: 554  ASKHAKAVGQARLGALMTVTKDIILRRTADILTKFLPPKHEMVLFCSPSEEQLRIYQAIL 613

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
               G +  R   +    +       L ++ N P +L              +D+ +D +  
Sbjct: 614  ---GSSQVRSLLQGAPGNGLLQIGVLRKLCNSPELL-------------LKDTEADADSP 657

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCS 1131
               ++G+  R             FF  ++  +        E  + GK++ ++++L T+ +
Sbjct: 658  TKALVGDLTR-------------FFPPNFVRN--------EARFGGKLICVMNLLQTVRA 696

Query: 1132 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 1191
               DK ++ S    TLD+IE              + KK   + RLDG+T   ER  +V +
Sbjct: 697  QTDDKVVLVSNFTSTLDIIE------------AMMRKKRYPYLRLDGKTPQDERMAMVNQ 744

Query: 1192 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1251
            FN     +    L+S ++G +G+NL  ANR++++D  WNP+ DLQA+ R  R GQ KP +
Sbjct: 745  FNREGVDKSFVFLLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQKKPCY 804

Query: 1252 AYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLFEF 1300
             YRL+  GTM+EKIY+RQ++K GL+  +++  ++    T S+EE+  +F  
Sbjct: 805  IYRLLLSGTMDEKIYQRQISKLGLSDSLMNAEKKTTSDTFSQEELRDIFTL 855


>gi|432112497|gb|ELK35235.1| DNA excision repair protein ERCC-6 [Myotis davidii]
          Length = 1489

 Score =  261 bits (667), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 193/646 (29%), Positives = 302/646 (46%), Gaps = 110/646 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 484  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 533

Query: 771  AFL----YTAMRS------------VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPL 814
            AFL    Y+ +R+            +  GL   +IV P  V+H W +EF  W P    P 
Sbjct: 534  AFLAGLSYSKIRTRGSNYRQVLLCRLFEGLGPTIIVCPTTVMHQWVKEFHTWWP----PF 589

Query: 815  RVFMLEDVSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
            RV +L +      R+ +L+       G+ +  Y+  R       ++  +++R   H    
Sbjct: 590  RVAVLHETGSYTHRKEKLIRDIAHCHGILITSYSYIR-------LRQDDISRHDWH---- 638

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                ++ DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DFV  G LG
Sbjct: 639  ---YVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLG 695

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPP 990
            +   F  +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP 
Sbjct: 696  TLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPD 755

Query: 991  KTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQL 1050
            K   V+  +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +   
Sbjct: 756  KNEQVLFCRLTDEQHKVYQNFIDSKEVY--RILNGEMQ--VFSGLIALRKICNHPDLF-- 809

Query: 1051 TKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHT 1110
                G P                     +  R ++D    ++  G +++           
Sbjct: 810  ---SGGP---------------------KTTRGISDNEPEEDQFGHWRR----------- 834

Query: 1111 YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
                  SGKM+++  +L +    G + L+FSQS   LD++E +L              + 
Sbjct: 835  ------SGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQK 876

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
              + ++DG T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRVII D  WN
Sbjct: 877  YSYLKMDGTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWN 934

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTIS 1290
            P+ D QA  RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R   
Sbjct: 935  PSTDTQARERAWRIGQRKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFK 994

Query: 1291 KEEMLHLFEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKLPLS 1335
              ++  LF     +        +   G GS  Q     LK KL L+
Sbjct: 995  SNDLYELFTLTSPDASQGTETSAIFAGTGSEVQTPKRHLKRKLQLA 1040


>gi|1495483|emb|CAA66379.1| RAD54 [Homo sapiens]
          Length = 747

 Score =  261 bits (667), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 190/605 (31%), Positives = 297/605 (49%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVSSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPAEELLEGKMSVSSLSSITSLKKLCNHPALI-------- 463

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D   G  D   F   + +  L      E   
Sbjct: 464  ----------------YDKCVEEE-----DGFVGALD--LFPPGYSSKAL------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLF 1298
            +  LF
Sbjct: 661  LKELF 665


>gi|396499206|ref|XP_003845417.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
 gi|312221998|emb|CBY01938.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
          Length = 1469

 Score =  261 bits (667), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 192/628 (30%), Positives = 294/628 (46%), Gaps = 95/628 (15%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    V  E+    V I   ++  L+ HQV G++F++      I       K  GCI+
Sbjct: 190  ILGLKKKVENERPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMI-----DPKANGCIM 244

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q IA ++T ++ S + G   ++  +I  P +++ NW  E +KW   +   
Sbjct: 245  ADEMGLGKTLQCIALMWTLLKQSPDAGKPTIQKCVIACPSSLVRNWANELVKWLGKDA-- 302

Query: 814  LRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFRNL--SFGKHVKDRNMAR 864
            +  F ++   S++   + + +W    G      V ++ Y   R     FG          
Sbjct: 303  ITPFAIDGKASKEELIQQIRQWSIASGRAVVRPVLIVSYETLRLYVDEFG---------- 352

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                  Q    +L+CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ +++
Sbjct: 353  ------QTPIGLLLCDEGHRLKNGESLTFTALNSLNVQRRVILSGTPIQNDLSEYFALLN 406

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F    +LG+  EFR +++ PI  G+  N T EDVK  N+R   L   +  F+ R   +++
Sbjct: 407  FANPNYLGTRMEFRKQYEIPILRGRDANGTDEDVKKGNERLTELLGLVNKFIIRRTNDIL 466

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
             K LP K   V+   L+P Q+ LY  F+   D+      + S              L ++
Sbjct: 467  SKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQSLLRGKGSQP------LKVIGMLKKL 520

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NHP +L L +D   P  ED                                D F QKD 
Sbjct: 521  CNHPDLLNLPED--LPGCEDVL-----------------------------PDDFVQKDA 549

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                     +    YSGKM +L  +L  + +   DK ++ S    TLDL     + L R 
Sbjct: 550  RGRDREVKVW----YSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDL----FAALCRS 601

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
               G L        RLDG    S+RQKLV++FN+P        L+S++AG  G+NL  AN
Sbjct: 602  RGYGAL--------RLDGTMNVSKRQKLVDKFNDPEGPEF-VFLLSSKAGGCGLNLIGAN 652

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+++ D  WNP  D QA+ R WR GQ K  F YR +  GT+EEK+++RQ  K+ L++ VV
Sbjct: 653  RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVV 712

Query: 1281 DR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            D  + V R  S + +  LF++ D+   D
Sbjct: 713  DSAEDVERHFSLDSLRELFQYRDNTTSD 740


>gi|126522468|gb|AAI32448.1| Ercc6 protein [Mus musculus]
          Length = 1157

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 194/635 (30%), Positives = 293/635 (46%), Gaps = 103/635 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 166  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 215

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 216  AFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWP----PFRVAVLHE 271

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                  ++  L+       GV +  Y+  R       +   +++R   H        ++ 
Sbjct: 272  TGSYTHKKERLIRDIVYCHGVLITSYSYIR-------LMQDDISRHDWH-------YVIL 317

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  
Sbjct: 318  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 377

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 378  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 437

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  Q ++Y+ F+D       R+ N +     F+G  AL +I NHP +       G P
Sbjct: 438  CRLTDEQHKVYQNFIDSKAVY--RILNGE--NQIFSGLVALRKICNHPDLFS-----GGP 488

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
              ++A     DE                                    L E  +     S
Sbjct: 489  --KNASGPPEDE------------------------------------LEEEQFGHWRRS 510

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   L ++E +L    R  K   L        ++D
Sbjct: 511  GKMIVVESLLKIWHRQGQRVLLFSQSRQMLHILEVFL----RAHKYSYL--------KMD 558

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ ++NE  +  +   L++TR G LG+NL  ANRVII D  WNP+ D QA
Sbjct: 559  GTTTIASRQPLITKYNE--DTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQA 616

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 617  RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 676

Query: 1298 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHK 1331
            F     +        +   G GSS Q   C LK +
Sbjct: 677  FTLTSPDASQGTETSAIFAGTGSSIQTPKCQLKKR 711


>gi|216548186|ref|NP_003570.2| DNA repair and recombination protein RAD54-like [Homo sapiens]
 gi|216548193|ref|NP_001136020.1| DNA repair and recombination protein RAD54-like [Homo sapiens]
 gi|51316508|sp|Q92698.2|RAD54_HUMAN RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=RAD54 homolog; Short=hHR54; Short=hRAD54
 gi|47777671|gb|AAT38113.1| RAD54-like (S. cerevisiae) [Homo sapiens]
 gi|111307699|gb|AAI21061.1| RAD54-like (S. cerevisiae) [Homo sapiens]
 gi|111309424|gb|AAI21060.1| RAD54-like (S. cerevisiae) [Homo sapiens]
 gi|119627335|gb|EAX06930.1| RAD54-like (S. cerevisiae), isoform CRA_b [Homo sapiens]
          Length = 747

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 190/605 (31%), Positives = 297/605 (49%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVSSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPAEELLEGKMSVSSLSSITSLKKLCNHPALI-------- 463

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D   G  D   F   + +  L      E   
Sbjct: 464  ----------------YDKCVEEE-----DGFVGALD--LFPPGYSSKAL------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLF 1298
            +  LF
Sbjct: 661  LKELF 665


>gi|341883380|gb|EGT39315.1| hypothetical protein CAEBREN_01708 [Caenorhabditis brenneri]
          Length = 1252

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/402 (37%), Positives = 219/402 (54%), Gaps = 60/402 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN    + +  + + + ++  L+ HQ+ GIRFM++N I+S+ + K  D G GCILAH+M
Sbjct: 250  LVNAGHPEEDPDIFVIAHLTHVLQPHQLGGIRFMYDNTIESLSEYKRSD-GFGCILAHSM 308

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ELKPLR 815
            GLGKT QVI F    +R+     +  LI+ P+N + NW  E+ KW P        ++   
Sbjct: 309  GLGKTIQVITFSEIFLRATKA--KKVLIIVPINTIQNWYAEYDKWIPKFSDTGDRIRNFE 366

Query: 816  VFMLEDVSR--DRRAELLAKWRAKGGVFLIGYTAFR---NLSFGKHVK------------ 858
            VF+L D  +  D+R  L+ +W  KGG+ LIGY  FR    ++  K  K            
Sbjct: 367  VFLLGDGVKTFDQRVNLIEEWDQKGGILLIGYDMFRLLIKMTMPKKAKKGRPKLNLFGIS 426

Query: 859  ---------DRNMARE----------------------ICHAL-QDGPDILVCDEAHMIK 886
                     D   ARE                      I HAL + GPD++VCDE H IK
Sbjct: 427  SGSSRGDQYDDAQAREEEMEFETGFTNGGRVRQEAYSLIRHALLEPGPDLVVCDEGHKIK 486

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            N  A+ +  L  +  +RRI LTG PLQNNLMEY+CM+DFVR  +LG    F  RF+ PI+
Sbjct: 487  NITAEISTTLGAIVTKRRIVLTGYPLQNNLMEYFCMIDFVRPKYLGVRKSFIERFEKPIK 546

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
            NGQ  +S+  DVK+  QR+H+L E +KGFVQR   +++K+ LP    +V+ ++ S +QR+
Sbjct: 547  NGQCVDSSPADVKLALQRTHVLVELVKGFVQRRTHHLLKRILPESKEYVLLLRKSQIQRQ 606

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            LY+ F+ L        +N+ +     A + A ++IWNHP IL
Sbjct: 607  LYRNFV-LWAKAEIAANNDSVFNPLMA-FSACSKIWNHPDIL 646



 Score =  169 bits (429), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 91/210 (43%), Positives = 134/210 (63%), Gaps = 7/210 (3%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--- 1156
            DW  +L  ++    L+   K+V+ L+IL   + +G+K L+FSQ++  LD++E  L K   
Sbjct: 796  DWTFELFEKYQEGVLENGYKIVVSLEILDESTRIGEKILIFSQNLTALDMLEEILRKRQI 855

Query: 1157 LPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN-EPLNKRVKCTLISTRAGSLGIN 1215
              +  K G+ W+K +++ RLDG T  ++R+KL+ RFN EP    ++  LISTRAGSLGIN
Sbjct: 856  AEKDDKYGERWEKNRNYLRLDGTTSGADREKLINRFNSEP---GLRLFLISTRAGSLGIN 912

Query: 1216 LHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGL 1275
            L SANR II+D  WNP +D QA+ R +RYGQ K  F YRL+   +ME  I+ RQ++K GL
Sbjct: 913  LVSANRCIIIDACWNPCHDAQAVCRVYRYGQQKKTFVYRLIMDNSMERSIFNRQISKHGL 972

Query: 1276 AARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
              RVVD  QV   IS++E+  L  + + ++
Sbjct: 973  QQRVVDDAQVDANISQKELETLLMYDEAQD 1002


>gi|268535648|ref|XP_002632959.1| C. briggsae CBR-RAD-26 protein [Caenorhabditis briggsae]
          Length = 1382

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/407 (36%), Positives = 217/407 (53%), Gaps = 69/407 (16%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +VN    + +  + + S ++  L+ HQ+ GIRFM++N I+S+ + K  D G GCILAH+M
Sbjct: 330  LVNAGHPEEDPDIFVISHLTHVLQPHQLGGIRFMYDNTIESLGEYKKSD-GFGCILAHSM 388

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS------ELKPLR 815
            GLGKT QVI F    +R+     +  L++ P+N + NW  E+ KW P       +++   
Sbjct: 389  GLGKTIQVITFSEIFLRATKA--KKVLVIVPINTIQNWYAEYDKWIPKFSDTGDKIRNFE 446

Query: 816  VFMLED--VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE-------- 865
            VF+L D   S D+R +L+ +W  +GGV LIGY  FR L      K +  +R         
Sbjct: 447  VFLLGDGVKSFDQRVDLIDQWDQRGGVLLIGYDMFRLLIKMTQPKKQKKSRPRLNLSGIS 506

Query: 866  ---------------------------------------ICHALQD-GPDILVCDEAHMI 885
                                                   I  AL D GPD++VCDE H I
Sbjct: 507  GMSSGGYGRDAFEEAREEELEFETGFTNGGRIRKEAFDLIRKALLDPGPDLVVCDEGHKI 566

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN  A+ +  L  ++ +RRI LTG PLQNNL+EY+CM+DFVR  +LG    F  RF+ PI
Sbjct: 567  KNITAEISNTLGAIQTKRRIVLTGYPLQNNLLEYFCMIDFVRPKYLGLRKSFIERFEKPI 626

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
            +NGQ  +S+ ED+KI  QR+H+L E +KGFVQR   +++KK LP    +V+ ++ S +QR
Sbjct: 627  KNGQCVDSSKEDIKIALQRTHVLVELVKGFVQRRTHHLLKKILPESKEYVLLLRKSQIQR 686

Query: 1006 RLYKRFL----DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            +LY+ F+    D      D V N          + A ++IWNHP IL
Sbjct: 687  QLYRNFVLWARDEISMNGDAVFNP------LMAFSACSKIWNHPDIL 727



 Score =  165 bits (418), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/211 (42%), Positives = 130/211 (61%), Gaps = 8/211 (3%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW   L   +    L+   K+V+ L+IL   + +G+K L+FSQ++  LD++E  L K   
Sbjct: 868  DWTTQLFETYQEGVLENGYKIVVALEILDESTKIGEKILIFSQNLTALDMLEEILRKRQV 927

Query: 1160 PGKQG----KLWKKGKDWYRLDGRTESSERQKLVERFN-EPLNKRVKCTLISTRAGSLGI 1214
              K+     + W+K +++ RLDG T  ++R+KL+ RFN EP    +   LISTRAGSLGI
Sbjct: 928  VKKEKSEHQERWEKNRNYLRLDGTTSGADREKLINRFNSEP---GLHLFLISTRAGSLGI 984

Query: 1215 NLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEG 1274
            NL SANR II+D  WNP +D QA+ R +RYGQ K  F YRL+   +ME  I+ RQ++K G
Sbjct: 985  NLVSANRCIIIDACWNPCHDAQAVCRVYRYGQQKKTFVYRLIMDNSMERSIFNRQISKHG 1044

Query: 1275 LAARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            L  RVVD  QV   IS++E+  L  + + ++
Sbjct: 1045 LQQRVVDDAQVDANISQKELETLLMYDESQD 1075


>gi|410905419|ref|XP_003966189.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Takifugu
            rubripes]
          Length = 1164

 Score =  261 bits (666), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 181/596 (30%), Positives = 291/596 (48%), Gaps = 95/596 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G+ F++E ++  +R       G G ILA  MGLGKT Q +A  +T ++    G
Sbjct: 553  LRPHQREGLIFLYECVM-GMRAAG----GSGAILADEMGLGKTLQSVALSWTLLKQGPYG 607

Query: 784  ----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE--LLAKWRAK 837
                ++  L+VTP +++ NW +EF KW   E   ++VF    V +D R E  +L+   + 
Sbjct: 608  GKPVVKRVLVVTPGSLVQNWGREFNKWLGRER--IQVFT---VDQDHRVEHFVLSPLHS- 661

Query: 838  GGVFLIGYTAF-------RNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRA 890
              V +I Y          + + FG                     +++CDE H +KN+  
Sbjct: 662  --VLVISYEMLLRCLDQVQKVEFG---------------------LIICDEGHRLKNSSI 698

Query: 891  DTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH 950
             T+ AL  + C RR+ LTG+P+QN+L E+Y +++FV  G LGSS  +R  ++ PI + + 
Sbjct: 699  KTSSALNSLSCSRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILHSRQ 758

Query: 951  TNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKR 1010
             + T E+  +  +R+  L      F+ R    ++ + LPP+  + +    SPLQ  LYK 
Sbjct: 759  PSCTEEERVLGEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCAPSPLQLELYKH 818

Query: 1011 FLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
             L  H      +       +  A   AL ++ NHP +L       Y + ++  D+ S+E 
Sbjct: 819  LL-CHRVFRSCLQAATQTHTHLACITALKKLCNHPVLL-------YSTVQERTDNGSEEG 870

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 1130
              Y          + +   G    G            E T  +   SGK+++L D+L   
Sbjct: 871  SFYE--------GLAELFPGSYSSG------------ELTTAD---SGKLMVLSDLLGAI 907

Query: 1131 SNMG--DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
              +   D+ +V S    TLDL+E     +            G  + RLDG T + +RQ+L
Sbjct: 908  RRLSPSDRVVVVSNYTKTLDLLEDLCVAM------------GYTFCRLDGHTPTGQRQRL 955

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            V+ FN   ++     L+S++AG +G+NL  A+ +++ D  WNP  D+QA+ R WR GQ K
Sbjct: 956  VDSFNSAYSQNF-LFLLSSKAGGVGLNLVGASHLVLYDIDWNPANDIQAMARVWRDGQKK 1014

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLFEFGD 1302
             V  YRL+  GT+EE++++RQV+K+GL+  VVD  +   H T S  E+  LF   D
Sbjct: 1015 TVHIYRLLTAGTIEERVFQRQVSKQGLSGTVVDLGKGAEHATFSTNELRDLFSLTD 1070


>gi|159489044|ref|XP_001702507.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158280529|gb|EDP06286.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 533

 Score =  261 bits (666), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 195/596 (32%), Positives = 286/596 (47%), Gaps = 83/596 (13%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---- 779
            L+ HQ  G++FM++ +     +   G  G GCILA  MGLGKT Q I  L+T +      
Sbjct: 6    LRPHQREGVQFMFDCVTG---QRLEGKHGAGCILADDMGLGKTLQGITLLWTLLGGGHPL 62

Query: 780  ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF--MLEDVSRDRRAELLAKW 834
               V L  R A+IV P +++ NW  E  KW    L  L +     EDV       L +  
Sbjct: 63   LGGVPLA-RRAIIVCPTSLVSNWDNECSKWLKGRLTTLAMCESSREDVCSSIALFLDSSN 121

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
                 V +I Y  FR      H  D+      C       D+L+CDEAH +KN    T +
Sbjct: 122  TGLHRVLIISYETFR-----MHA-DKFQVPHAC-------DLLMCDEAHRLKNDATLTNR 168

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            AL  + C+RR+ L+G+P+QN+L E++ MVDF   G LGS+ EFR R++ PI  G+  ++T
Sbjct: 169  ALDNMPCKRRVLLSGTPMQNHLDEFFAMVDFCNPGVLGSAAEFRRRYEAPILAGREPDAT 228

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
             E V +  +RS  L      F+ R    ++ + LPPK + V+  +L+ LQR LY  F  L
Sbjct: 229  PEQVALGEERSAELSGLTNRFILRRTNKLLSQHLPPKVIEVVCCRLTELQRALYIHF--L 286

Query: 1015 HGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
                  RV N  K      +   +L ++ NHP ++         + ED E          
Sbjct: 287  QSKAARRVLNAGKTTSGVLSAITSLKKLCNHPKLIY-DAAAAAAAGEDGE---------- 335

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSN 1132
                            GK  +GF           E    E    GKM +L  +L  + + 
Sbjct: 336  ----------------GK-IEGF-----------EVGPAEGAVGGKMAVLARMLHVLYTE 367

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
              D+ ++ S    TLDL       L R        ++G  + RLDG T  ++RQKLV+ F
Sbjct: 368  TTDRIVLVSNYTSTLDL----FVALCR--------ERGYPFVRLDGTTTINKRQKLVKVF 415

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N+P+ K+    L+S++AG  G+NL  ANR+++ D  WNP  D QA  R WR GQ K VF 
Sbjct: 416  NDPVEKQFA-FLLSSKAGGCGLNLIGANRLVLFDPDWNPANDAQAAARVWRDGQRKRVFV 474

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            YR ++ G++EEK+++RQ++KEGL   V    +     ++ E++  LF    D   D
Sbjct: 475  YRFLSTGSIEEKVFQRQMSKEGLKQLVGKTGKAAANVMTSEDLRELFSLNADSPSD 530


>gi|348560752|ref|XP_003466177.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia porcellus]
          Length = 1477

 Score =  261 bits (666), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 181/604 (29%), Positives = 283/604 (46%), Gaps = 108/604 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 498  DEGFKVPGFLFRKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 547

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L +
Sbjct: 548  AFLAGLSYSKIRTRGSNYRFEGLGPTMIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 603

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                  R+ +L+       G+ +  Y+  R       +   +++R   H        ++ 
Sbjct: 604  TGSYAHRKEKLIRDIAHCHGILITSYSYVR-------LMQDDISRHDWH-------YVIL 649

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DFV  G LG+   F  
Sbjct: 650  DEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFME 709

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G + N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 710  QFSVPITMGGYANASPVQVKTAYRCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 769

Query: 998  VKLSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
             +L+  Q ++Y+ F+D   ++   N  +         F+G  AL +I NHP +       
Sbjct: 770  CRLTDEQHKVYQNFIDSKEVYQILNGEM-------QIFSGLVALRKICNHPDLFS----- 817

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                                      P+N+      + ++G F   +W            
Sbjct: 818  ------------------------GGPKNLGGLPDEELEEGQF--GYWK----------- 840

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGKM+++  +L +    G + L+FSQS   L ++E +L              +G  + 
Sbjct: 841  -RSGKMIVVESLLKIWHRQGQRVLLFSQSRQMLHILEVFLR------------ARGYSYL 887

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            ++DG T  + RQ L+ R+N+  +  +   L++TR G LG+NL  ANRVII D  WNP+ D
Sbjct: 888  KMDGSTTIASRQPLITRYNQ--DTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTD 945

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
             QA  RAWR GQ + V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++
Sbjct: 946  TQARERAWRIGQKRQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDL 1005

Query: 1295 LHLF 1298
              LF
Sbjct: 1006 YELF 1009


>gi|448122424|ref|XP_004204446.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
 gi|358349985|emb|CCE73264.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
          Length = 836

 Score =  261 bits (666), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 195/615 (31%), Positives = 296/615 (48%), Gaps = 102/615 (16%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
             V I   ++  L+ HQV G+RF++      +       K  GCI+A  MGLGKT Q +  
Sbjct: 236  PVVIDPKLAKILRPHQVAGVRFLYRCTAGLV-----DPKAKGCIMADEMGLGKTLQCLTL 290

Query: 773  LYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRA 828
            ++T ++    G +T    +IV P +++ NW  E +KW     L PL +      S D  A
Sbjct: 291  MWTLLKQSPRGKKTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDGKSTKSSDLSA 350

Query: 829  ELLAKWRAKGG------VFLIGY-TAFRNLS--FGKHVKDRNMAREICHALQDGPDILVC 879
             L  +W    G      V +I Y T  RN+    G HV                  +++ 
Sbjct: 351  AL-QQWAVASGRNIVRPVLIISYETLRRNVDKLAGTHV-----------------GLMLA 392

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN+ + T   L  ++C RR+ L+G+P+QN+L EY+ +++F   G+LGS ++FR 
Sbjct: 393  DEGHRLKNSDSLTFTTLNSLRCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGSRNDFRK 452

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
             F+N I  G+  ++T ++    +++   L + +  F+ R   +++ + LP K  +V+ V 
Sbjct: 453  NFENDILRGRDADATEDEKNKGDKKLTELTQLVSKFIIRRTNDILAQYLPIKYEYVVFVG 512

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA-GYQALAQIW------NHPGILQLTK 1052
            LS +Q+ LY+ F          +++ +I+K     G Q L  I       NHP +L L  
Sbjct: 513  LSDMQKELYRHF----------ITSPEIKKLLRGVGSQPLKAIGILKKLCNHPDLLSLPG 562

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 1112
                    D E S      DY  V G   RN               + W           
Sbjct: 563  --------DIEGSERYIPEDYIPVSGGHGRNKE------------VQTW----------- 591

Query: 1113 ELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
               +SGK  +L   L  +     DK ++ S    TLDLIE    K+ R  + G L     
Sbjct: 592  ---FSGKFSILERFLYKLRVETNDKIVLISNYTQTLDLIE----KMCRTKRYGSL----- 639

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
               RLDG    ++RQKLV+RFN+P        L+S++AG  GINL  ANR+I++D  WNP
Sbjct: 640  ---RLDGTMNINKRQKLVDRFNDPEGSEF-IFLLSSKAGGCGINLIGANRLILIDPDWNP 695

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTIS 1290
              D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K  L++ VVD ++ V R  S
Sbjct: 696  AADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVERLFS 755

Query: 1291 KEEMLHLFEFGDDEN 1305
             + +  LFEF  + N
Sbjct: 756  ADNLKQLFEFQPETN 770


>gi|393911645|gb|EFO25268.2| hypothetical protein LOAG_03215 [Loa loa]
          Length = 1113

 Score =  261 bits (666), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 195/606 (32%), Positives = 291/606 (48%), Gaps = 109/606 (17%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            ++IP+    KL  +Q  G+R  W N +         ++ +G ILA  MGLGKT QVI+FL
Sbjct: 240  MKIPNDCWKKLYKYQKTGVR--WLNELH--------NQCVGGILADEMGLGKTVQVISFL 289

Query: 774  YTAMRS-------VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
                 S          GL   LI+ P  ++H W +EF  W P  L  + +         +
Sbjct: 290  RALAFSRLEDRGFSFFGLGPVLIICPTTLIHQWLKEFHTWFP--LCRVAILHSSGSFHGQ 347

Query: 827  RAELLAKW---RAKGGVFLIGYTAF-RNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
              +L+ K    R+ G V L  Y  F RN    KH+ D+     I H        ++ DE 
Sbjct: 348  NPQLIRKMVVARSDGNVLLTSYGTFARN---RKHLVDK-----IWH-------YVILDEG 392

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H I+N  A  T A+K+V+   R+ L+GSPLQN+L E + +VDFV  G LG+ H F ++F 
Sbjct: 393  HKIRNPEAQITLAVKEVRTPHRLILSGSPLQNSLRELWSLVDFVYPGRLGALHSFMDKFS 452

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD------LPPKTVFVI 996
             PI  G + N+T+  V+   + + IL + +  ++ R     +KKD      LP KT  V+
Sbjct: 453  IPITQGGYANATAVQVRTAYKCACILRDAINPYLLRR----LKKDVEMSIHLPTKTEQVL 508

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
               ++P QR LY+ +L  H  +  R+ + K     F G   L ++ NHP ++      G 
Sbjct: 509  FCNITPCQRSLYEEYLSSHECS--RILSGKT--DAFVGLITLRKLCNHPDLI-----TGG 559

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
            P++ +    +++  MD+    G   R                                  
Sbjct: 560  PNKFNDYSVTAENEMDF----GAPCR---------------------------------- 581

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            SGKM +L  +L +      K L+FSQS   L ++E +            + ++G ++ R+
Sbjct: 582  SGKMQVLKALLKLWKQQDQKVLLFSQSRQMLTILEKF------------VIQEGYEYLRM 629

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG T    RQ LVE+FN+     +   L++TR G LGINL  ANRV+I D  WNP+ D+Q
Sbjct: 630  DGTTPVRSRQLLVEKFNKV--DEIFIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQ 687

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            A  RAWR GQ + V  YRL+  GT+EEKIY RQ+ K  L+ R++   +  R     E+  
Sbjct: 688  ARERAWRIGQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVDPRQRRFFKTNELHE 747

Query: 1297 LFEFGD 1302
            LF  GD
Sbjct: 748  LFCLGD 753


>gi|312071855|ref|XP_003138800.1| hypothetical protein LOAG_03215 [Loa loa]
          Length = 1112

 Score =  261 bits (666), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 195/606 (32%), Positives = 291/606 (48%), Gaps = 109/606 (17%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            ++IP+    KL  +Q  G+R  W N +         ++ +G ILA  MGLGKT QVI+FL
Sbjct: 240  MKIPNDCWKKLYKYQKTGVR--WLNELH--------NQCVGGILADEMGLGKTVQVISFL 289

Query: 774  YTAMRS-------VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
                 S          GL   LI+ P  ++H W +EF  W P  L  + +         +
Sbjct: 290  RALAFSRLEDRGFSFFGLGPVLIICPTTLIHQWLKEFHTWFP--LCRVAILHSSGSFHGQ 347

Query: 827  RAELLAKW---RAKGGVFLIGYTAF-RNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
              +L+ K    R+ G V L  Y  F RN    KH+ D+     I H        ++ DE 
Sbjct: 348  NPQLIRKMVVARSDGNVLLTSYGTFARN---RKHLVDK-----IWH-------YVILDEG 392

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H I+N  A  T A+K+V+   R+ L+GSPLQN+L E + +VDFV  G LG+ H F ++F 
Sbjct: 393  HKIRNPEAQITLAVKEVRTPHRLILSGSPLQNSLRELWSLVDFVYPGRLGALHSFMDKFS 452

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD------LPPKTVFVI 996
             PI  G + N+T+  V+   + + IL + +  ++ R     +KKD      LP KT  V+
Sbjct: 453  IPITQGGYANATAVQVRTAYKCACILRDAINPYLLRR----LKKDVEMSIHLPTKTEQVL 508

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
               ++P QR LY+ +L  H  +  R+ + K     F G   L ++ NHP ++      G 
Sbjct: 509  FCNITPCQRSLYEEYLSSHECS--RILSGKT--DAFVGLITLRKLCNHPDLI-----TGG 559

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
            P++ +    +++  MD+    G   R                                  
Sbjct: 560  PNKFNDYSVTAENEMDF----GAPCR---------------------------------- 581

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            SGKM +L  +L +      K L+FSQS   L ++E +            + ++G ++ R+
Sbjct: 582  SGKMQVLKALLKLWKQQDQKVLLFSQSRQMLTILEKF------------VIQEGYEYLRM 629

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG T    RQ LVE+FN+     +   L++TR G LGINL  ANRV+I D  WNP+ D+Q
Sbjct: 630  DGTTPVRSRQLLVEKFNKV--DEIFIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQ 687

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            A  RAWR GQ + V  YRL+  GT+EEKIY RQ+ K  L+ R++   +  R     E+  
Sbjct: 688  ARERAWRIGQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVDPRQRRFFKTNELHE 747

Query: 1297 LFEFGD 1302
            LF  GD
Sbjct: 748  LFCLGD 753


>gi|354470052|ref|XP_003497406.1| PREDICTED: DNA repair and recombination protein RAD54 isoform 1
            [Cricetulus griseus]
 gi|354470056|ref|XP_003497407.1| PREDICTED: DNA repair and recombination protein RAD54 isoform 2
            [Cricetulus griseus]
          Length = 744

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 187/603 (31%), Positives = 291/603 (48%), Gaps = 80/603 (13%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 133  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 187

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +       
Sbjct: 188  LQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDE 247

Query: 824  RDRRAELLAKWRA---KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 880
             DR+ E     R       + +I Y  FR L  G  +K  N+             +++CD
Sbjct: 248  IDRKLEGFMNQRGARVPSPILIISYETFR-LHVGV-LKKGNVG------------LVICD 293

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ EF+  
Sbjct: 294  EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKH 353

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKL 1000
            F+ PI   +   ++  D ++  +R   L   +   + R   +++ K LP K   V+  +L
Sbjct: 354  FELPILRSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRL 413

Query: 1001 SPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE 1060
            +PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++    DK     +
Sbjct: 414  TPLQTELYKRFLR-QAKPEEELREGKMSVSSLSSITSLKKLCNHPALIY---DKCVSGED 469

Query: 1061 DAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKM 1120
              ED+                  ++ F  G                      E   SGKM
Sbjct: 470  GFEDT------------------LDIFPPGYTSKAV----------------EPQLSGKM 495

Query: 1121 VLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDG 1178
            ++L  IL M  S   DK ++ S    TLDL E             KL +  +  Y RLDG
Sbjct: 496  LVLDYILAMTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYVRLDG 542

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
                 +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+
Sbjct: 543  TMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM 601

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHL 1297
             R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E+  L
Sbjct: 602  ARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKEL 661

Query: 1298 FEF 1300
            F  
Sbjct: 662  FTL 664


>gi|355745253|gb|EHH49878.1| hypothetical protein EGM_00608 [Macaca fascicularis]
          Length = 753

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 189/607 (31%), Positives = 296/607 (48%), Gaps = 86/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAMVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D K+  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRKLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPAEELREGKMSVSSLSSITSLKKLCNHPALIH------- 464

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                   D   +E                D   G  D   F   + +  L      +   
Sbjct: 465  -------DKCVEE---------------EDGFVGALD--LFPPGYSSKALEPQLSGDPFP 500

Query: 1117 SGKMVLLLDILTM---CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
            + KM++L  IL +   CS+  DK ++ S    TLDL E             KL +  +  
Sbjct: 501  TSKMLVLDYILAVTRSCSS--DKVVLVSNYTQTLDLFE-------------KLCRARRYL 545

Query: 1174 Y-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            Y RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP 
Sbjct: 546  YVRLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 604

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISK 1291
             D QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S 
Sbjct: 605  NDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSL 664

Query: 1292 EEMLHLF 1298
             E+  LF
Sbjct: 665  GELKELF 671


>gi|358054278|dbj|GAA99204.1| hypothetical protein E5Q_05897 [Mixia osmundae IAM 14324]
          Length = 911

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 189/596 (31%), Positives = 295/596 (49%), Gaps = 100/596 (16%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNL 782
            L+ HQV G++F+++     I      +   GCI+A  MGLGKT Q I  L+T ++ S   
Sbjct: 326  LRPHQVEGVKFLYKAATGMI-----SEGAFGCIMADEMGLGKTLQCITLLFTLLKQSPKA 380

Query: 783  G---LRTALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRAELLA---KWR 835
            G   +  A++V P +++ NW  EF+KW  P  + PL +    D S  +  +L+A   +W 
Sbjct: 381  GKGTIEKAIVVCPASLVRNWANEFVKWLGPGTINPLAI----DGSMPK-PDLMAALRQWV 435

Query: 836  AKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNT 888
            +  G      V ++ Y   R+L+                 L + P  +++CDEAH +KN 
Sbjct: 436  SAHGRAICQPVIIVSYETLRSLT---------------AELGNAPIGLILCDEAHRLKNA 480

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               T   L ++  QRR+ LTG+P+QN+L EY+ +++F   G LG+  +F+  ++  I  G
Sbjct: 481  TNLTYTELDKINVQRRVLLTGTPVQNDLTEYFSLLNFAIPGKLGARADFKKNYELAIVRG 540

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            + + +T ++ +   ++   L   +  FV R   +++ K LP K   V+   LSPLQ +LY
Sbjct: 541  RMSEATDKERERCQEKLKELTSLVNQFVIRRTNDLLTKYLPVKYEHVVFCNLSPLQLQLY 600

Query: 1009 KRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSD 1068
            ++ +           + K   S     Q   ++ NHP +L               D+   
Sbjct: 601  QKLI-----KRPEEKDAKGGTSALGAIQRAQKLCNHPQLL---------------DAYFR 640

Query: 1069 ENMDYNVVIGEKPRNMNDFLQGKND--DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
            +N D             DF   KND  DGF   D    ++ E       YSGK ++L   
Sbjct: 641  DNFD-------------DF---KNDMPDGFDPFDRRRSVVSE-------YSGKTLVLDRF 677

Query: 1127 L-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSER 1185
            L  M +   DK ++ S    TLD+ E    K+ R  K G        ++RL+G T   +R
Sbjct: 678  LEKMRAETNDKIVLISNYTETLDVFE----KMLRDRKYG--------YFRLEGSTSIKKR 725

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
            QKLV+ FN P  K     L+S++AG  GINL  ANR+I+ D  WNP  D QA+ R WR G
Sbjct: 726  QKLVDEFNNPEGKEF-VFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDG 784

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEF 1300
            Q K  F YR +A GT+EEKI++RQ  K+ L++ VVD ++   R  S++++  LF +
Sbjct: 785  QKKDCFVYRFIATGTIEEKIFQRQAHKQALSSCVVDAKEDAERHFSRDDLKQLFAY 840


>gi|440902038|gb|ELR52884.1| DNA excision repair protein ERCC-6 [Bos grunniens mutus]
          Length = 1488

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 191/636 (30%), Positives = 293/636 (46%), Gaps = 113/636 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 484  DEGFKMPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 533

Query: 771  AFL----YTAMRS------------VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPL 814
            AFL    Y+ +R+            +  GL   +IV P  V+H W +EF  W P+     
Sbjct: 534  AFLAGLSYSKIRTRGSNYRQVLLCRLFEGLGPTIIVCPTTVMHQWVKEFHTWWPA----F 589

Query: 815  RVFMLEDV-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
            RV +L +  S   + E L +  A+  G+ +  Y+  R       +   +++R   H    
Sbjct: 590  RVAVLHETGSFTHKKEKLVRDIARCHGILITSYSYIR-------LMQDDISRHDWH---- 638

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                ++ DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG
Sbjct: 639  ---YVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLG 695

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPP 990
            +   F  +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP 
Sbjct: 696  TLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPD 755

Query: 991  KTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQL 1050
            K   V+  +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +   
Sbjct: 756  KNEQVLFCRLTDEQHKVYQNFIDSKEVY--RILNGEMQ--IFSGLVALRKICNHPDLFSG 811

Query: 1051 TKD--KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
                 KG P  E  ED                                 Q  +W      
Sbjct: 812  GPKNLKGIPDEELGED---------------------------------QFGYWK----- 833

Query: 1109 HTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK 1168
                    SGKM+++  +L +    G + L+FSQS   LD++E +L              
Sbjct: 834  -------RSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------A 874

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            +   + ++DG T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRVII D  
Sbjct: 875  QKYSYLKMDGTTAIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVIIYDPD 932

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT 1288
            WNP+ D QA  RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R 
Sbjct: 933  WNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRF 992

Query: 1289 ISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNT 1324
                ++  LF     +        +   G GS   T
Sbjct: 993  FKSNDLYELFTLSSPDTSQSTETSAIFAGTGSDVQT 1028


>gi|322707957|gb|EFY99534.1| recombinational repair protein [Metarhizium anisopliae ARSEF 23]
          Length = 807

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 195/629 (31%), Positives = 300/629 (47%), Gaps = 97/629 (15%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    V +E+ +  V +   ++  L+ HQV G++FM+  +   I      +K  GCI+
Sbjct: 192  ILGIRKKVTKEQPQVPVVLDPKLAKILRPHQVEGVKFMYRCVTGMIE-----EKANGCIM 246

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q I  ++T ++ S   G   ++ A++V P +++ NW  E  KW   + + 
Sbjct: 247  ADEMGLGKTLQCITLMWTLLKQSPEAGKPTIQKAIVVCPASLVKNWANELTKWLGANAIT 306

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      E+++R  R   +A  R+    V ++ Y   R N+   KH K         
Sbjct: 307  PFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI-------- 358

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
                    +L CDE H +KN+ ++T  AL  +   RR+ LTG+P+QN+L EY+ +  F  
Sbjct: 359  -------GLLFCDEGHRLKNSDSNTFNALNSLDVSRRVILTGTPIQNDLTEYFSLTSFAN 411

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG----FVQRMDMNV 983
               LGS  EFR RF+ PI  G+  +++  D     QR  +   +L G    F+ R   ++
Sbjct: 412  PDLLGSRLEFRKRFEIPILRGRDADASESD----RQRGDVCTAELLGIVNKFLIRRTNDI 467

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQ 1040
            + K LP K   V+   +SP Q  LY  F+   D+      + S              L +
Sbjct: 468  LSKYLPVKYEHVVFCGVSPFQESLYNYFITSPDIQALLRGKGSQP------LKAINILKK 521

Query: 1041 IWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD 1100
            + NHP +L L+ D   P  E                    P  +    +G++ D      
Sbjct: 522  LCNHPDLLNLSDD--LPGSE----------------CCFPPEYIPKEARGRDRD------ 557

Query: 1101 WWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
                          +YSGKM++L  +L  +  +  DK ++ S    TLDL E    +L R
Sbjct: 558  -----------VRPEYSGKMMVLDRMLARIRQDTNDKIVLISNYTSTLDLFE----RLCR 602

Query: 1160 PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
              + G L        RLDG    ++RQKLV+RFN+P N      L+S++AG  GINL  A
Sbjct: 603  SREYGCL--------RLDGTMNVNKRQKLVDRFNDP-NGEEFVFLLSSKAGGCGINLIGA 653

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NR+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ V
Sbjct: 654  NRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCV 713

Query: 1280 VDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            VD  + V R  S + +  LF++  +   D
Sbjct: 714  VDSAEDVERHFSLDSLRELFQYRPNTTSD 742


>gi|448124749|ref|XP_004205004.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
 gi|358249637|emb|CCE72703.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
          Length = 836

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 195/615 (31%), Positives = 296/615 (48%), Gaps = 102/615 (16%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
             V I   ++  L+ HQV G+RF++      +       K  GCI+A  MGLGKT Q +  
Sbjct: 236  PVVIDPKLAKILRPHQVAGVRFLYRCTAGLV-----DPKAKGCIMADEMGLGKTLQCLTL 290

Query: 773  LYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRA 828
            ++T ++    G +T    +IV P +++ NW  E +KW     L PL +      S D   
Sbjct: 291  MWTLLKQSPRGKKTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAIDGKSTKSSDLSG 350

Query: 829  ELLAKWRAKGG------VFLIGY-TAFRNLS--FGKHVKDRNMAREICHALQDGPDILVC 879
             L  +W    G      V +I Y T  RN+    G HV                  +++ 
Sbjct: 351  AL-QQWAVASGRNIVRPVLIISYETLRRNVDKLAGTHV-----------------GLMLA 392

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN+ + T  AL  ++C RR+ L+G+P+QN+L EY+ +++F   G+LGS ++FR 
Sbjct: 393  DEGHRLKNSDSLTFTALNSLRCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGSRNDFRK 452

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
             F+N I  G+  ++T ++    +++   L + +  F+ R   +++ + LP K  +V+ V 
Sbjct: 453  NFENDILRGRDADATEDEKNKGDKKLTELTQLVSKFIIRRTNDILAQYLPIKYEYVVFVG 512

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA-GYQALAQIW------NHPGILQLTK 1052
            LS +Q+ LY+ F          +++ +I+K     G Q L  I       NHP +L L  
Sbjct: 513  LSDMQKELYRHF----------ITSPEIKKLLRGVGSQPLKAIGMLKKLCNHPDLLSLPG 562

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 1112
                    D E S      DY  V G   RN               + W           
Sbjct: 563  --------DIEGSEKYIPEDYIPVSGGHGRNKE------------VQTW----------- 591

Query: 1113 ELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
               +SGK  +L   L  +     DK ++ S    TLDLIE    K+ R  + G L     
Sbjct: 592  ---FSGKFSILERFLYKLRVETNDKIVLISNYTQTLDLIE----KMCRTKRYGSL----- 639

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
               RLDG    ++RQKLV+RFN+P        L+S++AG  GINL  ANR+I++D  WNP
Sbjct: 640  ---RLDGTMNINKRQKLVDRFNDPEGPEF-IFLLSSKAGGCGINLIGANRLILIDPDWNP 695

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTIS 1290
              D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K  L++ VVD ++ V R  S
Sbjct: 696  AADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVERLFS 755

Query: 1291 KEEMLHLFEFGDDEN 1305
             + +  LFEF  + N
Sbjct: 756  ADNLKQLFEFQPETN 770


>gi|408389789|gb|EKJ69216.1| hypothetical protein FPSE_10614 [Fusarium pseudograminearum CS3096]
          Length = 805

 Score =  260 bits (665), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 193/632 (30%), Positives = 304/632 (48%), Gaps = 107/632 (16%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++  +E  R+P  I  +L    + HQV G++FM++ +   I      +K  GCI+
Sbjct: 190  ILGIKKKTDDEHPRVPVVIDPRLAKILRPHQVEGVKFMYQCVTGLI-----DEKANGCIM 244

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q I+ ++T ++ S + G   ++ A++V P +++ NW  E  KW  +    
Sbjct: 245  ADEMGLGKTLQCISLMWTLLKQSPDAGKSTIQKAIVVCPASLVKNWANELTKWLGANA-- 302

Query: 814  LRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFR-NLSFGKHVKDRNMARE 865
            +  F ++   S+D     L +W    G      V ++ Y   R N+   K+ K       
Sbjct: 303  INPFAIDGKASKDELTRQLRQWAHATGRSVTRPVIIVSYETLRLNVEELKNTKI------ 356

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
                      +L CDE H +KN+ ++T  AL  +   RR+ LTG+P+QN+L EY+ +  F
Sbjct: 357  ---------GLLFCDEGHRLKNSDSNTFNALNSLNVSRRVILTGTPIQNDLTEYFSLTSF 407

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
                 LG+  EFR R++ PI  G+  +++  D K  ++ +  L   +  F+ R   +++ 
Sbjct: 408  ANPDLLGTRLEFRKRYEIPILRGRDADASEADRKKGDECTAALLGVVNKFLIRRTNDILS 467

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            K LP K   V+   L+P Q  LY  F+   ++      + S              L ++ 
Sbjct: 468  KYLPVKYEHVVFCNLAPFQFDLYNYFIKSPEIQALLRGKGSQP------LKAINILKKLC 521

Query: 1043 NHPGILQLTKD-----KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
            NHP +L ++ D     K YP              DY       P+      +G++ +   
Sbjct: 522  NHPDLLNMSDDLPGSEKCYPD-------------DY------VPKEA----RGRDRE--- 555

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSK 1156
             K W              YSGKM +L  +L  +  +  DK ++ S    TLDL E    K
Sbjct: 556  VKSW--------------YSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFE----K 597

Query: 1157 LPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
            L R  + G L        RLDG    ++RQKLV+RFN+P        L+S++AG  GINL
Sbjct: 598  LCRSRQYGSL--------RLDGTMNVNKRQKLVDRFNDPEGDEF-IFLLSSKAGGCGINL 648

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L+
Sbjct: 649  IGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLS 708

Query: 1277 ARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            + VVD  + V R  S + +  LF++  D   D
Sbjct: 709  SCVVDSAEDVERHFSLDSLRELFQYRSDTKSD 740


>gi|345327989|ref|XP_001508174.2| PREDICTED: DNA excision repair protein ERCC-6 [Ornithorhynchus
            anatinus]
          Length = 882

 Score =  260 bits (665), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 186/610 (30%), Positives = 291/610 (47%), Gaps = 104/610 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  R+P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 102  DEGFRVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 151

Query: 771  AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            AFL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +L D
Sbjct: 152  AFLAGLSYSKIRTRGSNYRFKGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHD 207

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                 +++ +L+ +     G+ +  Y+  R       +   N+     H        ++ 
Sbjct: 208  TGSYTNKKVKLIHEIAGCQGILITSYSYIR-------LMQDNINNYDWH-------YVIL 253

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DFV  G LG+   F  
Sbjct: 254  DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFME 313

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K   V+ 
Sbjct: 314  QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLF 373

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             +L+  QR +Y+ F+D    + +  S        F G  AL ++ NHP +          
Sbjct: 374  CRLTAEQREVYQNFID----SKEVYSILSGEMQIFPGLMALRKMCNHPDLF--------- 420

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                    S    +  NV         +D L+ ++  G++++                 S
Sbjct: 421  --------SGGPKILKNVP--------DDELEEEDQFGYWKR-----------------S 447

Query: 1118 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            GKM+++  +L +    G + L+FSQS   L ++E +L        +G+ +     + ++D
Sbjct: 448  GKMIVVESLLKIWHKQGHRVLLFSQSRQMLHILEVFL--------RGQKY----SYLKMD 495

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G T  + RQ L+ R+NE  +  +   L++TR G +G+NL  ANRVII D  WNP+ D QA
Sbjct: 496  GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQA 553

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1297
              RAWR GQ + V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  L
Sbjct: 554  RERAWRIGQKRQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 613

Query: 1298 FEFGDDENPD 1307
            F      NPD
Sbjct: 614  FTL---SNPD 620


>gi|426329478|ref|XP_004025767.1| PREDICTED: DNA repair and recombination protein RAD54-like [Gorilla
            gorilla gorilla]
          Length = 747

 Score =  260 bits (664), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 188/605 (31%), Positives = 296/605 (48%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIH------- 464

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                   D   +E   +   +G     ++ F  G +                    E   
Sbjct: 465  -------DKCVEEEDGF---VGA----LDLFPPGYSSKAL----------------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSSDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLF 1298
            +  LF
Sbjct: 661  LKELF 665


>gi|410261060|gb|JAA18496.1| RAD54-like [Pan troglodytes]
 gi|410351929|gb|JAA42568.1| RAD54-like [Pan troglodytes]
          Length = 747

 Score =  260 bits (664), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 188/605 (31%), Positives = 296/605 (48%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVSSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIH------- 464

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                   D   +E   +   +G     ++ F  G +                    E   
Sbjct: 465  -------DKCVEEEDGF---VGA----LDLFPPGYSSKAL----------------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLF 1298
            +  LF
Sbjct: 661  LKELF 665


>gi|395512148|ref|XP_003760306.1| PREDICTED: DNA repair and recombination protein RAD54B [Sarcophilus
            harrisii]
          Length = 912

 Score =  260 bits (664), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 190/597 (31%), Positives = 301/597 (50%), Gaps = 87/597 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ ++T +R    G
Sbjct: 298  LRPHQKEGIVFLYECVM-GMRM----NGRFGAILADEMGLGKTLQCISLVWTLLRQGLYG 352

Query: 784  ----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG 839
                ++  LIVTP +++ NWK+EF KW  SE   ++VF    V +D + E          
Sbjct: 353  GKPIIKKTLIVTPGSLVTNWKKEFQKWLGSER--IKVFT---VDQDHKIEDFVN-SPLYS 406

Query: 840  VFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQ 898
            V +I Y    R L   K++K                D+L+CDE H +KN+   TT AL  
Sbjct: 407  VLVISYEMLLRCLDQIKNIKF---------------DLLICDEGHRLKNSSIKTTTALVG 451

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            + C++R+ LTG+P+QN+L E+Y +++FV  G LGS   +R  ++ PI   +  ++T E+ 
Sbjct: 452  LSCEKRVILTGTPIQNDLQEFYALIEFVNPGILGSLSSYRKIYEEPIIASREPSATEEEK 511

Query: 959  KIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT 1018
            K+  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY++ LD     
Sbjct: 512  KLGEKRAAELTRLTGLFILRRTQEVINKYLPPKIENVVFCRPGRLQIELYRKLLDSQAV- 570

Query: 1019 NDRVSNEKIRKS--FFAGYQALAQIWNHPGILQLTKDKGYPSREDAE-DSSSDENMDYNV 1075
              R   + + ++        AL ++ NHP +L       + S ++ E +SSSDE  +YN 
Sbjct: 571  --RFCLQGVLENSPHLICIGALKKLCNHPCLL-------FKSLKEKECNSSSDEYEEYNF 621

Query: 1076 ---VIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 1132
               +I   P + N                        T+ E D SGK+ +L  +L +   
Sbjct: 622  SESLIDAYPADYNPL----------------------TFSETD-SGKLHVLTKLLAVIHE 658

Query: 1133 M--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVE 1190
            +   +K ++ S    TL+++            Q    + G +  RLDG+T   +RQ++V+
Sbjct: 659  LSPSEKVVLVSNYTQTLNIL------------QEVCKRHGYNCSRLDGQTPVVQRQQIVD 706

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
             FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+ R WR GQ   V
Sbjct: 707  GFNSKHSSDF-VFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMARVWRDGQKHSV 765

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEFGDDEN 1305
              YRL+  GT+EEKIY+RQ++K+GL+  VVD  +   H   S EE+ +LF   +D +
Sbjct: 766  HIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLSKTSEHIQFSVEELKNLFTLHEDSD 822


>gi|195116621|ref|XP_002002852.1| GI10760 [Drosophila mojavensis]
 gi|292630864|sp|B4KHL5.1|RAD54_DROMO RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=Protein okra
 gi|193913427|gb|EDW12294.1| GI10760 [Drosophila mojavensis]
          Length = 783

 Score =  260 bits (664), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 186/606 (30%), Positives = 298/606 (49%), Gaps = 111/606 (18%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +   +T +
Sbjct: 145  LSNVLRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLTWTLL 196

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
            R        +  A+IV+P +++ NW++EF KW    +  L    +E  S++     L ++
Sbjct: 197  RQSPDCKPTISKAIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTTRALEQF 253

Query: 835  ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
                  R    V LI Y  FR      H+        +C   +    +++CDE H +KN+
Sbjct: 254  AMNTATRCGTPVLLISYETFR---LYAHI--------LC---KTEVGMVICDEGHRLKNS 299

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               T QAL  +K +RR+ L+G+P+QN+L EY+ +V+FV    LG++ +F+  F+N I  G
Sbjct: 300  DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSILRG 359

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            Q+ +ST  + +   Q++  L   +   + R    ++ K LP K   V+ VKL+P+Q ++Y
Sbjct: 360  QNADSTDAERQRALQKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCVKLTPVQLQIY 419

Query: 1009 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 1059
              FL      +D+V       NEK   +  A    L ++ NHP ++      K+KG+   
Sbjct: 420  TNFLK-----SDQVRRSLADCNEKASLTALADITTLKKLCNHPDLIYEKIAAKEKGF--- 471

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
                     EN    +    KP+++N  L GK                            
Sbjct: 472  ---------ENSQNVLPPNYKPKDVNPELSGK---------------------------- 494

Query: 1120 MVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
              +LLD +   + +N  DK ++ S    TLDL E    +L R        K+   + RLD
Sbjct: 495  -FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYTYVRLD 541

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            G     +R K+V+RFN+P      C L  +S++AG  G+NL  ANR+ + D  WNP  D 
Sbjct: 542  GTMTIKKRSKVVDRFNDP---STDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 598

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEM 1294
            QA+ R WR GQ KP + YRL+A G++EEKI +RQ  K+ L++ ++D  +   +  +++++
Sbjct: 599  QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESSEKHFTRDDL 658

Query: 1295 LHLFEF 1300
              LF F
Sbjct: 659  KDLFSF 664


>gi|363754225|ref|XP_003647328.1| hypothetical protein Ecym_6118 [Eremothecium cymbalariae DBVPG#7215]
 gi|356890965|gb|AET40511.1| hypothetical protein Ecym_6118 [Eremothecium cymbalariae DBVPG#7215]
          Length = 915

 Score =  260 bits (664), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 185/570 (32%), Positives = 280/570 (49%), Gaps = 81/570 (14%)

Query: 749  GDKG-LGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFM 804
            G++G  GCI+A  MGLGKT Q I+ L+T +R  + G  T    +IV P ++++NW  E +
Sbjct: 338  GNRGAYGCIMADEMGLGKTLQCISLLWTLLRQGSQGRPTIDKCIIVCPSSLVNNWANEIV 397

Query: 805  KWR-PSELKPLRV-FMLEDVSRDRRAELLAKWRAKGG------VFLIGY-TAFRNLSFGK 855
            KW  P+ L PL +      +     ++ + +W    G      V +I Y T  RN+   K
Sbjct: 398  KWLGPNSLSPLAIDGKKSSLPNGSVSQSIKQWALSQGRNIVKPVLIISYETLRRNVDLLK 457

Query: 856  HVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNN 915
            H K                 +++ DE H +KN  + T  +L  + C RR+ L+G+P+QN+
Sbjct: 458  HSK---------------VGLMLADEGHRLKNGESLTFTSLDSINCSRRVILSGTPIQND 502

Query: 916  LMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF 975
            L EY+ ++ F   G LG+  +FR  F+ PI  G+  ++T ++++    +   L + +  F
Sbjct: 503  LSEYFALLSFSNPGLLGTRSQFRKNFELPILRGRDADATDKEIEEGQLKLQQLSQIVSKF 562

Query: 976  VQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFF 1032
            + R   +++ K LP K   VI V LSP+Q+ +Y+ F+   D+        S         
Sbjct: 563  IIRRTNDILSKYLPCKYEHVIFVNLSPMQKSIYQHFVKSRDVAKLVKGTGSQP------L 616

Query: 1033 AGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKN 1092
                 L ++ NHP +LQL +D               E  D+ +     P +    +   N
Sbjct: 617  KAIGLLKKLCNHPDLLQLPEDI--------------EGCDHLI-----PEDYRSSMAQHN 657

Query: 1093 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIE 1151
              GF            HT  +  YSGK  +L   L  + +   DK ++ S    TLDLIE
Sbjct: 658  RSGF----------RGHTAIQTCYSGKFSILERFLYKIRTESNDKIVLISNYTQTLDLIE 707

Query: 1152 FYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGS 1211
                 + R    G L        RLDG    ++RQKLV+RFN P        L+S++AG 
Sbjct: 708  M----MCRYNHYGVL--------RLDGTMSINKRQKLVDRFNNPDGDEF-IFLLSSKAGG 754

Query: 1212 LGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVT 1271
             GINL  ANR+I+VD  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKIY+RQ  
Sbjct: 755  CGINLIGANRLILVDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIYQRQSM 814

Query: 1272 KEGLAARVVD-RQQVHRTISKEEMLHLFEF 1300
            K  L++ VVD ++ V R  S + +  LF+F
Sbjct: 815  KMSLSSCVVDEKEDVERLFSSDNLRQLFQF 844


>gi|345564001|gb|EGX46983.1| hypothetical protein AOL_s00097g222 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1390

 Score =  260 bits (664), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 185/624 (29%), Positives = 293/624 (46%), Gaps = 102/624 (16%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            V E    AV I   ++  L+ HQ+ G++F++      I       K  GCI+A  MGLGK
Sbjct: 206  VSEIPRVAVVIDPRLAKVLRPHQIEGVKFLYRATTGLI-----DSKAHGCIMADEMGLGK 260

Query: 766  TFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLE 820
            T Q I  ++T ++ S   G   +R  +I  P +++ NW  E +KW     + P  V    
Sbjct: 261  TLQCITLMWTLLKQSPEAGRPTIRKCVIACPSSLVRNWANELVKWLGEGTIHPFAVD--G 318

Query: 821  DVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP 874
              +++     L +W    G      V ++ Y   R   + K +    +            
Sbjct: 319  KATKEELISQLKQWAIASGNQVVRPVLIVSYETLR--LYAKELGSTEIG----------- 365

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
             +++CDE H +KN  + T  AL ++  +RR+ L+G+P+QN+L EY+ +++F    +LGS 
Sbjct: 366  -LMLCDEGHRLKNGESLTFTALTELNVKRRVILSGTPIQNDLTEYFSLLNFANPDYLGSR 424

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             +FR +++ PI  G+  NS  +  +  ++R   L+  +  F+ R   +++ K LP K   
Sbjct: 425  ADFRKKYEMPILRGRDANSDEKTREKGDERLKELFGLVNKFIIRRTNDILSKYLPVKYEH 484

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-------FAGYQALAQIWNHPGI 1047
            V+   L+P QR LY  F          V++ ++RK               L ++ NHP +
Sbjct: 485  VVFCGLAPFQRDLYNHF----------VTSSEVRKLLRGVGCKPLKAINVLKKLCNHPDL 534

Query: 1048 LQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL- 1106
            L+L  D                                  L G   + FF  D+      
Sbjct: 535  LELPDD----------------------------------LHGS--EQFFPSDFVPKAAR 558

Query: 1107 -HEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQG 1164
              +  Y  + YSGKM++L  +L  +  +  DK ++ S    TLD+ E    KL R     
Sbjct: 559  GRDGRYVNVCYSGKMLVLDRMLARIRQDTNDKIVLISNYTQTLDVFE----KLAR----- 609

Query: 1165 KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
                KG  + RLDG    ++RQKLV++FN P        L+S++AG  G+NL  ANR+++
Sbjct: 610  ---SKGYGFLRLDGTMNVNKRQKLVDKFNNPDGDEF-IFLLSSKAGGCGLNLIGANRLVL 665

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-Q 1283
             D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  Q
Sbjct: 666  FDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQ 725

Query: 1284 QVHRTISKEEMLHLFEFGDDENPD 1307
             V R    E++  LFE+  +   D
Sbjct: 726  DVERHFGSEDLRKLFEYNTNTRSD 749


>gi|47228866|emb|CAG09381.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1286

 Score =  260 bits (664), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 186/613 (30%), Positives = 290/613 (47%), Gaps = 107/613 (17%)

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E+ +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT 
Sbjct: 373  EEFDEGFKVPGFLWKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTI 422

Query: 768  QVIAFL----YTAMRSVN-----LGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFM 818
            QVI+FL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +
Sbjct: 423  QVISFLAGLSYSKLRTRGSNYRYAGLGPTIIVCPATVMHQWVREFHAWWP----PFRVAV 478

Query: 819  LEDVSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI 876
            L +       + +L+ +  +  G+ +  Y+A R       +    + R   H        
Sbjct: 479  LHETGSFSSNKKKLIPEIVSCHGILITSYSAVR-------IMQDTLQRWDWH-------Y 524

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++ DE H I+N  A  T A KQ +   R  L+GSP+QNNL E + + DFV  G LG+   
Sbjct: 525  IILDEGHKIRNPNAGVTLACKQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPV 584

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVF 994
            F  +F  PI  G ++N++   V+   + + +L + +  + ++RM  +V     LP K   
Sbjct: 585  FMEQFSVPITMGGYSNASPVQVQTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQ 644

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
            V+  KL+  QR++Y+ FLD       ++ N  ++   F G  AL +I NHP +       
Sbjct: 645  VLFCKLTEEQRQVYRSFLDSKEVY--QILNRDMQ--VFPGLIALRKICNHPDLFS----- 695

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD---WWNDLLHEHTY 1111
            G P                             FL+G  +D   Q+D   +W         
Sbjct: 696  GGP----------------------------QFLRGVPEDQLAQEDRFGFWKR------- 720

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
                 SGK++++  +L +    G + L+F+QS   L+++E ++             +   
Sbjct: 721  -----SGKLIVVESLLRLWFRQGQRVLLFTQSRQMLNILEVFVR------------ENNY 763

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
             + ++DG T  S RQ L+ R+NE  +  +   L++T+ G LG+NL  ANRVII D  WNP
Sbjct: 764  SYLKMDGTTSISSRQPLIARYNE--DNSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNP 821

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            + D QA  RAWR GQT+ V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R    
Sbjct: 822  STDTQARERAWRIGQTQQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKS 881

Query: 1292 EEMLHLFEFGDDE 1304
             ++  LF   D +
Sbjct: 882  NDIYELFTLSDPD 894


>gi|326430759|gb|EGD76329.1| hypothetical protein PTSG_01031 [Salpingoeca sp. ATCC 50818]
          Length = 752

 Score =  260 bits (664), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 195/604 (32%), Positives = 296/604 (49%), Gaps = 80/604 (13%)

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL-GCILAHTMGLGKT 766
            EK    V +   +  KL+ HQV G++F+W N +  +       +G  GCI+A  MGLGKT
Sbjct: 119  EKRPVHVVVDPILGTKLRPHQVEGVQFLW-NAVTGV-----NIEGFNGCIMADEMGLGKT 172

Query: 767  FQVIAFLYTAM-RSVNLGLRT--ALIVTPVNVLHNWKQEFMKWRPSELKPLRV-FMLEDV 822
            FQ +  ++T + +S +    T  A+IV P +++ NW  EF KW  + + PL V    +D+
Sbjct: 173  FQCVTLVWTLLTQSPDCRPTTNKAIIVCPSSLVKNWYNEFGKWLGNRISPLAVDSGRDDM 232

Query: 823  SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
             R     + A  R +  V ++ Y A R            +  +I      G  I++CDE 
Sbjct: 233  KRQMERFVSATGRVQHPVLILSYEALR------------LNADILCVKPIG--IVICDEG 278

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN+++ T ++L Q+K  RRI L+G+P+QN L+EYY +V+F   G LGS+ EFR RF+
Sbjct: 279  HRLKNSQSQTYKSLMQLKTARRIILSGTPIQNELLEYYALVEFCNPGLLGSAGEFRKRFE 338

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
            NPI   + + +T ++++I  QR   + E +   V R   +++ K LPPK   V+  + + 
Sbjct: 339  NPILRSRDSLATDKELEIGAQRLAEMTEIVNRCVIRRTNDILSKYLPPKIEQVVCCRPTN 398

Query: 1003 LQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA 1062
            LQ  +YK  L   G    R  +  +  S  A    L ++ NHP   QL  DK        
Sbjct: 399  LQMEMYKAML---GAKMKR-KDGTVTGSSLAFITELKKLCNHP---QLLHDK-------- 443

Query: 1063 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK--DWWNDLLHEHTYKELDYSGKM 1120
                         + G          +GK  D  F     +   L       +   SGK+
Sbjct: 444  -------------IAG----------KGKTKDKAFGALDPFLPQLKPSMQRLQPQLSGKL 480

Query: 1121 VLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
             +L  +L T+     DK ++ S    TL+L     +             +G  + RLDG 
Sbjct: 481  AVLDCLLATIKMQTTDKIVLVSNYTQTLELFTTLCA------------LRGYQYVRLDGS 528

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
                 RQK+V+RFN+P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ 
Sbjct: 529  MTIKRRQKIVDRFNDPTSSDF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMA 587

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLF 1298
            R WR GQTK  F YR +  GT+EEKI +RQ  K+ L+  VVD    V R  SK ++  LF
Sbjct: 588  RVWRDGQTKLCFVYRFVTTGTIEEKILQRQAHKKALSQCVVDDGLDVERHFSKNDLRELF 647

Query: 1299 EFGD 1302
               D
Sbjct: 648  VLDD 651


>gi|157128256|ref|XP_001661368.1| hypothetical protein AaeL_AAEL002341 [Aedes aegypti]
 gi|108882255|gb|EAT46480.1| AAEL002341-PA [Aedes aegypti]
          Length = 851

 Score =  260 bits (664), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 194/605 (32%), Positives = 287/605 (47%), Gaps = 92/605 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +P ++S  L+ HQ  G+ F++E ++    +    D+  G ILA  MGLGKT Q I+ +
Sbjct: 235  VTVPYALSKHLRPHQREGVSFLYECVLGF--RYTDADR-FGAILADEMGLGKTLQCISLI 291

Query: 774  YTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
            YT M+        L+  LIVTP +++ NW +E  KW    LK  R+F    VS     + 
Sbjct: 292  YTLMKQGPYSQPILKRILIVTPSSLMENWDREISKW----LKTERIFTF-IVSPTNPLKK 346

Query: 831  LAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRA 890
             A+  A   + +I Y         K +++ +  +          D+++CDE H +KN+  
Sbjct: 347  YAQ-SAHIPILIISYELL-----SKQIRELDSVKF---------DLMICDEGHRLKNSAI 391

Query: 891  DTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH 950
             T+  L  V+C RRI LTG+P+QN+L E+Y ++ FV  G LG+  EF+ +F+NPI   Q 
Sbjct: 392  KTSSILDAVECPRRILLTGTPIQNDLQEFYSLITFVNPGLLGTYSEFKTKFENPILQSQQ 451

Query: 951  TNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKR 1010
                     +   R   L      F+ R    V+ K LP K   VI    S LQ  L + 
Sbjct: 452  PGVLPMFANLGKARLEELNSITSSFILRRTQEVINKYLPGKQEAVIFCHPSKLQETLLRT 511

Query: 1011 FLDLHGFTNDRVSNEKIRKSFFAGYQ---ALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
             +  +         EK  +S +   Q    L +I NHP ++                 +S
Sbjct: 512  AIQFY---------EKSDRSTYFPLQLITVLKKICNHPSLI-----------------AS 545

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
             E +D   V G   + +ND L             W D+           SGK+ +L  +L
Sbjct: 546  TEKID---VGGSLIKLLNDNLPP-----------WQDMGPTD-------SGKLAVLDSLL 584

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
                   +K+++ S    TLD+I             G        + RLDG T S +R K
Sbjct: 585  ETLIQRQEKAVIVSYYGKTLDMI------------MGLCEHYNYKYCRLDGSTPSQDRCK 632

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            +V  FN P +      L+S +AG +G+NL  A+R+I+ D  WNP  DLQA+ R WR GQT
Sbjct: 633  IVSSFNSP-SSDTFIFLLSAKAGGIGLNLTGASRLILYDNDWNPASDLQAMSRIWRDGQT 691

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ--VHRTISKEEMLHLFEFGDDEN 1305
            + VF YRL+   ++EEKIY+RQ++K  L+  VVD +Q   +   S EE+  LF F DD N
Sbjct: 692  RNVFIYRLITAFSIEEKIYQRQISKTSLSGTVVDLKQNLSNLKFSDEELKDLFFFTDD-N 750

Query: 1306 PDPLT 1310
             D LT
Sbjct: 751  DDCLT 755


>gi|397483209|ref|XP_003812796.1| PREDICTED: DNA repair and recombination protein RAD54-like [Pan
            paniscus]
          Length = 747

 Score =  260 bits (664), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 189/607 (31%), Positives = 298/607 (49%), Gaps = 92/607 (15%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVSSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPAEELLEGKMSVSSLSSITSLKKLCNHPALIH------- 464

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                   D   +E   +   +G     ++ F  G +                    E   
Sbjct: 465  -------DKCVEEEDGF---VGA----LDLFPPGYSSKAL----------------EPQL 494

Query: 1117 SGKMVLLLDILTM---CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
            SGKM++L  IL +   CS+  DK ++ S    TLDL E             KL +  +  
Sbjct: 495  SGKMLVLDYILAVTRSCSS--DKVVLVSNYTQTLDLFE-------------KLCRARRYL 539

Query: 1174 Y-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            Y RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP 
Sbjct: 540  YVRLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 598

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISK 1291
             D QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S 
Sbjct: 599  NDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSL 658

Query: 1292 EEMLHLF 1298
             E+  LF
Sbjct: 659  GELKELF 665


>gi|431896848|gb|ELK06112.1| DNA repair and recombination protein RAD54-like protein [Pteropus
            alecto]
          Length = 761

 Score =  260 bits (664), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 188/607 (30%), Positives = 297/607 (48%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 150  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 204

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 205  LQCITLIWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 261

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 262  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 306

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG+++E
Sbjct: 307  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAYE 366

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   +T  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 367  FKKHFELPILKGRDAAATEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKFEQVV 426

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LY+RFL       D +   K+  S  +   +L ++ NHP ++        
Sbjct: 427  CCRLTPLQTELYQRFLR-QAKPADELREGKMSVSSLSSITSLKKLCNHPALI-------- 477

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D  +G  D   F   + +  +          
Sbjct: 478  ----------------YDKCVEEE-----DGFEGTLD--IFPPGYSSKTIAPQ------L 508

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 509  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 555

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 556  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 614

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 615  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 674

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 675  LKELFTL 681


>gi|324507205|gb|ADY43057.1| DNA repair and recombination protein RAD54-like protein, partial
            [Ascaris suum]
          Length = 755

 Score =  260 bits (664), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 186/597 (31%), Positives = 295/597 (49%), Gaps = 80/597 (13%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   ++A L+ HQ  G++FM++     +R     +   GCI+A  MGLGKT Q I  L
Sbjct: 153  VVVDPVLAAILRPHQREGVKFMYD-CTTGMRI----ENAYGCIMADEMGLGKTLQCITLL 207

Query: 774  YTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE- 829
            +T +R        +   +IV P +++ NW +E  KW    +  L +        DR  E 
Sbjct: 208  WTLLRQSPDAKPMISKVVIVCPSSLVKNWDKEIAKWLGGRVNSLPIDSGGKEEIDRNLES 267

Query: 830  LLAKW--RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
             L++   R    V +I Y  FR            +  E+   L+    +++CDE H +KN
Sbjct: 268  FLSQMGSRCSTPVLIISYETFR------------LHAEV--LLRKEVGLVICDEGHRLKN 313

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
            +   T QAL  +KC+RR+ ++G+P+QN+L+EYY +V+FV  G LG++ EF+ RF+N I  
Sbjct: 314  SDNQTYQALSGLKCERRVLISGTPIQNDLLEYYSLVNFVNPGLLGTAQEFKRRFENVILR 373

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            G+  ++T       ++    +   +   + R   +++ K LP K   ++  KL+ LQ +L
Sbjct: 374  GRDADATDAQRAKGDEALAEMASIVNKCIIRRTSSLLTKYLPVKYELIVCCKLTDLQEKL 433

Query: 1008 YKRFLDLHGFTNDRV-SNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS 1066
            Y++ +       D   S+ KI  +  +    L ++ NHP   QL  DK   + E  +   
Sbjct: 434  YQKLISSKRLKEDTSRSDGKITGTALSFITNLKKLCNHP---QLVYDKCQKNEEGFQGC- 489

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
                             +  F  G +D  F                E  +SGKM +L  +
Sbjct: 490  -----------------LELFPSGFSDKTF----------------EPAFSGKMKVLDYL 516

Query: 1127 LTMC-SNMGDKSLVFSQSIPTLD-LIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            L +      DK ++ S    T+D  +E  L KL R G           + RLDG +   +
Sbjct: 517  LAVTKQTTNDKFVLVSNYTQTIDSFVE--LCKLRRYG-----------YVRLDGSSSIKQ 563

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            R K+VE+FN+P +      L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR 
Sbjct: 564  RAKIVEKFNDPTSSEY-VFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARIWRD 622

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLFEF 1300
            GQ K  F YRL+A GT+EEK+++RQ  K+ L++ VVD +  V R  SK+++ HLFE 
Sbjct: 623  GQKKHCFIYRLLATGTIEEKMFQRQTHKKALSSCVVDEEVDVARHFSKDQLRHLFEL 679


>gi|261334529|emb|CBH17523.1| SNF2 DNA repair protein, putative [Trypanosoma brucei gambiense
            DAL972]
          Length = 1068

 Score =  260 bits (664), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 189/599 (31%), Positives = 292/599 (48%), Gaps = 80/599 (13%)

Query: 724  LKAHQVVGIRFMWENIIQS-IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV-N 781
            L+AHQ+ GIRFMW  + +  + +V +    +GCILAHTMGLGKT QVI FL+  +  +  
Sbjct: 252  LRAHQLKGIRFMWSILAEGPVGQVPA----VGCILAHTMGLGKTCQVIIFLHLFLDMLRK 307

Query: 782  LG---------LRTALIVTPVNVLHNWKQEFMKW-----RPSELKPLRVFMLEDVSR-DR 826
            +G          R  LIV P +    W +EF  W     R   + PL V   ED +R  +
Sbjct: 308  MGGSWYKSKKKQRRILIVVPKSTRAVWIEEFNMWSKFFPRDKRIVPLSV---EDCTRVGQ 364

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
            R  +  +W+  GGV L GY    N++       + +     +      D+LVCDEAH +K
Sbjct: 365  RVRVFNEWKTNGGVLLAGYEMLLNVAKCIGTTSQEVWNPSSYV-----DLLVCDEAHRLK 419

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            +        L+     RR+ +TG+PLQN+L EY+ MVD     +  +   F   F +PIE
Sbjct: 420  SENLQIANVLRSFNPLRRLLITGTPLQNHLKEYWAMVDMAVWKYF-NKQRFSQFFVSPIE 478

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
                  ++S++V +   ++  L  +L+ FVQ  D   ++K+LPP   +V+ + LS  Q +
Sbjct: 479  AAADQKASSDEVTVARMKTFALSRELRNFVQCADGTALRKELPPLHEYVVVLPLSQSQAK 538

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAE--- 1063
            LY  FL L   +  R       ++F     A+ +I  HP +L  T   G+ + E+ +   
Sbjct: 539  LYNEFLQLARHSGAR------HRAFLEIAIAINKICAHPQLLYAT---GFATGEEGQSEA 589

Query: 1064 -----DSSSDENM--------DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHT 1110
                 D   D+N           NV +  K R +     G                    
Sbjct: 590  LGLLSDGEGDDNFMTECPEAGQENVALRSKRRGLCQPPPG-------------------- 629

Query: 1111 YKELDYSG-KMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL-PRPGKQGKLWK 1168
            Y  +   G K+ + + I+      G++ L FS S   LD+ E  ++++  R  K G L  
Sbjct: 630  YVPMPEEGTKLYVSILIIKAAVLRGERCLFFSMSTKLLDIFEGIIAEMNDRWLKDGSL-S 688

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            +   + RLDGR    ER + +  F    +      L+ST+AG +G+ + SA RVII DGS
Sbjct: 689  RPIVFCRLDGRKTEWERSEALRSFAS--STGADLFLLSTKAGGIGLTITSATRVIIADGS 746

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            +NP  D QAI RA+RYGQT+PV+AYRL+ + T E +++++++ KE L   VV+   + R
Sbjct: 747  FNPADDTQAIGRAYRYGQTQPVYAYRLVCYQTFEHRMFQQKLAKEWLFRTVVEEASLKR 805


>gi|238878261|gb|EEQ41899.1| DNA repair and recombination protein RAD54 [Candida albicans WO-1]
          Length = 848

 Score =  260 bits (664), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 201/642 (31%), Positives = 311/642 (48%), Gaps = 110/642 (17%)

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVK 747
            E+LG      IV    EK  +   +P  I  KL    + HQ+ G++F++      I    
Sbjct: 226  EILG------IVTNPEEKLSKYPDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDA-- 277

Query: 748  SGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFM 804
               +  GCI+A  MGLGKT Q +  ++T +R    G RT    +IV P +++ NW  E +
Sbjct: 278  ---RAKGCIMADEMGLGKTLQCLTLMWTLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIV 334

Query: 805  KWR-PSELKPLRVFMLEDVSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFG 854
            KW     L PL V    D    + +EL   L +W    G      V +I Y   R     
Sbjct: 335  KWLGEGALTPLAV----DGKSTKNSELGTALQQWSTAQGRNIVRPVLIISYETLR----- 385

Query: 855  KHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN 914
            ++V D+    E+         +++ DE H +KN  + T  AL  ++C+RR+ L+G+P+QN
Sbjct: 386  RNV-DKLAGTEV--------GLMLADEGHRLKNGDSLTFTALNSLRCERRVILSGTPIQN 436

Query: 915  NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG 974
            +L EY+ +++F   G+LG+  EF+  ++N I  G+ + ++ E+ +  +++ + L + +  
Sbjct: 437  DLSEYFSLLNFANPGYLGTRIEFKKNYENAILKGRDSTASDEEREKGDKKLNELSQMVSK 496

Query: 975  FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-FA 1033
            F+ R   +++ K LP K  +V+   LSP+Q+ +Y  F          +++ +I+K     
Sbjct: 497  FIIRRTNDILSKYLPIKYEYVLFTGLSPMQKDIYNHF----------ITSPEIKKLMKGT 546

Query: 1034 GYQALAQIW------NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDF 1087
            G Q L  I       NHP +L L         ED E S      DY   I     + N  
Sbjct: 547  GSQPLKAIGMLKKLCNHPDLLDLP--------EDVEGSEEFIPDDYQSSIAGGSASRNRE 598

Query: 1088 LQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN-MGDKSLVFSQSIPT 1146
            +Q           W              +SGK ++L   L   +    DK ++ S    T
Sbjct: 599  IQ----------TW--------------FSGKFLILERFLQKINKETDDKIVLISNYTQT 634

Query: 1147 LDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIS 1206
            LDLIE    K+ R  K G L        RLDG    ++RQKLV++FN+P N      L+S
Sbjct: 635  LDLIE----KMCRYKKYGVL--------RLDGTMNINKRQKLVDKFNDP-NGPEFIFLLS 681

Query: 1207 TRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIY 1266
            ++AG  GINL  ANR++++D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI+
Sbjct: 682  SKAGGCGINLIGANRLVLMDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIF 741

Query: 1267 KRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEFGDDENPD 1307
            +RQ  K  L++ VVD ++ V R  S   +  LF+F  D   D
Sbjct: 742  QRQSMKMSLSSCVVDEKEDVERLFSVANLRQLFKFQPDTQCD 783


>gi|17508659|ref|NP_492438.1| Protein RAD-54 [Caenorhabditis elegans]
 gi|6580248|emb|CAA22254.2| Protein RAD-54 [Caenorhabditis elegans]
          Length = 818

 Score =  259 bits (663), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 181/594 (30%), Positives = 290/594 (48%), Gaps = 94/594 (15%)

Query: 724  LKAHQVVGIRFMWENIIQ-SIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 782
            L+ HQ  G++FMW+ +   +I +        GCI+A  MGLGKT Q I+ L+T +R    
Sbjct: 202  LRPHQRDGVKFMWDCVTGINIPEFH------GCIMADEMGLGKTLQCISLLWTLLRQSPD 255

Query: 783  GLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLA------- 832
               T   ++IV P +++ NW +E  KW  + L  +       V   +R +++A       
Sbjct: 256  ACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAM------PVDSGKREQIIACLNSFMA 309

Query: 833  --KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRA 890
              K R    V +I Y  FR            +   I H+   G  I++CDE H +KN+  
Sbjct: 310  DSKMRCAIPVLIISYETFR------------LYANILHSGDVG--IVICDEGHRLKNSEN 355

Query: 891  DTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH 950
             T QAL  +KC RR+ ++G+P+QN+L+EY+ +V+FV  G LG++ EFR +F+N I  G+ 
Sbjct: 356  LTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRD 415

Query: 951  TNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKR 1010
             +++SED K   +++  +   ++  + R    ++ K LP K   +I  K S LQ  LY +
Sbjct: 416  ADASSEDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNK 475

Query: 1011 FLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
             ++          ++    S  +    L ++ NHP ++              ++    +N
Sbjct: 476  LIECEKQNRIVEKDKGATASALSFITHLKKLCNHPYLVY-------------DEFQKPDN 522

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD--YSGKMVLLLDILT 1128
               N  +   P + N                          K  D  +SGKM +L  IL 
Sbjct: 523  RFRNKCLSIFPESFNP-------------------------KSFDPSFSGKMKVLDYILA 557

Query: 1129 MC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
            +      DK ++ S    T+D     L KL           +G D+ RLDG     +R K
Sbjct: 558  VTRKTTDDKFVLVSNYTQTIDQF-MELCKL-----------RGYDFVRLDGSMSIKQRSK 605

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            +V+ FN+P +  + C L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ 
Sbjct: 606  IVDTFNDPAST-IFCFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 664

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEF 1300
            K  F YRL+A G++EEK+++RQ  K+ L++ VVD  + V R  S E++  LF+ 
Sbjct: 665  KMCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGEDVARHFSSEQLRELFKL 718


>gi|326433455|gb|EGD79025.1| helicase DNA-binding protein [Salpingoeca sp. ATCC 50818]
          Length = 1742

 Score =  259 bits (663), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 147/373 (39%), Positives = 200/373 (53%), Gaps = 38/373 (10%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            +NV R   E  V +   +   LK HQ+ G+RFMWEN++ S+    + + G GCILAH MG
Sbjct: 560  INVNRTGSEGPVYVAQELVPYLKPHQIGGVRFMWENVVDSLEDFDTSE-GFGCILAHCMG 618

Query: 763  LGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV 822
            LGKT QV+ F    +R+        ++    N + NW+ E++KW  S   P  +F+  D 
Sbjct: 619  LGKTLQVVTFTELFLRATPASCVMVVVPV--NTVQNWRNEYLKWLKSANLP-NIFVARDG 675

Query: 823  SRDR-RAELLAKWRAKGGVFLIGYTAFRNLS-----FGKHVK------------------ 858
               R R E +  W+  GGV ++GY   R L+       K +K                  
Sbjct: 676  RNFRERLETIKSWKEAGGVLIVGYEMLRRLAREEGRVAKSLKSMTATASSASSSSTQTIP 735

Query: 859  -DRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNL 916
             D     EI  AL   GPD++VCDE H IKN +A  ++ LK+++  RR+ LTGSPLQNNL
Sbjct: 736  EDVEEFSEIQQALLNPGPDLVVCDEGHRIKNEKAAISKVLKKIRTARRVVLTGSPLQNNL 795

Query: 917  MEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV 976
             EY+CMVDFVR   LG+  EFRN F NPI NG   +S  EDVK+M  R+++L++ L GFV
Sbjct: 796  EEYWCMVDFVRPDHLGTLEEFRNMFVNPIMNGNCVDSRQEDVKLMRYRTYVLHKMLSGFV 855

Query: 977  QRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS-FFAGY 1035
            QR D  ++ + LP K  +V+ VK+S  Q  LYK  L         V  E+ RK   F  Y
Sbjct: 856  QRRDDRILNRSLPRKLEYVLPVKMSDTQEALYKHMLQY-------VLEEEGRKGRLFRAY 908

Query: 1036 QALAQIWNHPGIL 1048
                 IWNHP + 
Sbjct: 909  STAVMIWNHPDVF 921



 Score =  194 bits (493), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 95/187 (50%), Positives = 131/187 (70%), Gaps = 1/187 (0%)

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
            L    K V+LL +L +C  + +K LVFSQS+  LDL+E +L +L  PG + + W+K K +
Sbjct: 1133 LHNGSKFVVLLTMLHLCVQLREKVLVFSQSLFALDLVESFLKRLVVPGTR-EAWQKKKHY 1191

Query: 1174 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
            +RLDG T +SER  ++E FN+  N  +   LISTRAGSLGI+L +A+RV+I+D SWNP++
Sbjct: 1192 FRLDGSTSASERADMIEAFNDRSNLDMHAFLISTRAGSLGISLTAASRVVILDTSWNPSH 1251

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEE 1293
            D QA+ R +RYGQ KP F YRL+A GTMEE IY RQVTK GLA RVVD +   R  ++++
Sbjct: 1252 DAQAVCRVYRYGQDKPCFIYRLVAAGTMEETIYNRQVTKVGLANRVVDTENPERHFTEDQ 1311

Query: 1294 MLHLFEF 1300
            +  LF +
Sbjct: 1312 LRQLFTY 1318


>gi|71008587|ref|XP_758230.1| hypothetical protein UM02083.1 [Ustilago maydis 521]
 gi|46097848|gb|EAK83081.1| hypothetical protein UM02083.1 [Ustilago maydis 521]
          Length = 870

 Score =  259 bits (663), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 192/639 (30%), Positives = 308/639 (48%), Gaps = 106/639 (16%)

Query: 685  LSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSI----SAKLKAHQVVGIRFMWENII 740
            + AGA+++    ++   I+ + + K +E  ++P  I    S  L+ HQV G++F++    
Sbjct: 244  IEAGAAVQTPHKSLAD-ILGLNKAKSKEIEKVPVVIDPVLSKVLRPHQVEGVKFLYRCTT 302

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTPVNVL 796
              +      +K  GCI+A  MGLGKT Q IA ++T ++   +  ++ +    IV P +++
Sbjct: 303  GLVV-----EKAYGCIMADEMGLGKTLQCIALMWTLLKQSPIAHKSTIEKCIIVCPSSLV 357

Query: 797  HNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRN 850
             NW  E +KW      P  + +   +S+D   E   +W +  G      V ++ Y   RN
Sbjct: 358  RNWANELIKWL-GPAAPGNLALDGKLSKDEMIEATRRWCSASGRAISQPVMIVSYETLRN 416

Query: 851  LSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGS 910
            L            +E     + G  +L+CDE H +KN  + T QAL Q+K +RR+ L+G+
Sbjct: 417  L------------QEELGNTEVG--LLLCDEGHRLKNADSLTFQALTQIKVRRRVILSGT 462

Query: 911  PLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYE 970
            P+QN+L EY+ +++F     LGS  EFR  F+  I  G+   +T +  +  N++   L  
Sbjct: 463  PIQNDLSEYFALLNFANPELLGSRTEFRKNFEIAILKGRDAEATEKQQQEANEKLSQLSA 522

Query: 971  QLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS 1030
             +  F+ R   +++ K LP K   V+  K+S  Q  LY+ F          + + +I+K 
Sbjct: 523  LVSRFIIRRTNDLLSKYLPVKYEHVVFCKMSAFQLDLYRLF----------IRSPEIKKL 572

Query: 1031 FFA-GYQALAQIW------NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 1083
                G Q L  I       NHP +L L  D                              
Sbjct: 573  LRGTGSQPLKAIGILKKLCNHPDLLDLPND------------------------------ 602

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQ 1142
                L+G  +  +F + +      +  Y   + SGKM++L   L T+ +   DK ++ S 
Sbjct: 603  ----LEGSEE--YFPEAYTP---RDRRYVNPELSGKMMVLQRFLETIRATSNDKIVLISN 653

Query: 1143 SIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKC 1202
               TLD+ E    ++ R  + G         +RLDG    ++RQKLV+RFN+P  K    
Sbjct: 654  YTQTLDVFE----RMCRANRWG--------MFRLDGTMTINKRQKLVDRFNDPEGKEF-I 700

Query: 1203 TLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTME 1262
             L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A G++E
Sbjct: 701  FLLSSKAGGCGLNLIGANRLVLFDPDWNPASDQQALARVWRDGQKKSCFVYRFIATGSIE 760

Query: 1263 EKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1300
            EKI +RQ  K+ L++ VVD  Q   R  S E++  LF F
Sbjct: 761  EKILQRQSHKQSLSSCVVDEAQDAARHFSGEDLRALFTF 799


>gi|403417896|emb|CCM04596.1| predicted protein [Fibroporia radiculosa]
          Length = 815

 Score =  259 bits (663), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 192/612 (31%), Positives = 295/612 (48%), Gaps = 99/612 (16%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
            AV I   +   L+ HQ+ G++F+++     I      +   GCI+A  MGLGKT Q IA 
Sbjct: 212  AVVIDPRLCKVLRPHQIEGVKFLYKCTTGMIV-----ENQYGCIMADEMGLGKTLQCIAL 266

Query: 773  LYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 828
            L+T ++ S + G  T    +I  P +++ NW  E +KW    L    V  L    +  +A
Sbjct: 267  LWTLVKQSPHAGKPTIEKCIIACPSSLVKNWANELVKW----LGKDTVSALAIDGKGGKA 322

Query: 829  ELLAK---WRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
            E+LA+   W A GG      V ++ Y   R+L+               H       +L+C
Sbjct: 323  EMLARVARWVAAGGRNVSQPVMIVSYETLRSLT--------------AHLANCSIGLLLC 368

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN+ + T QAL  +  +RR+ L+G+P+QN+L EY+ +++F    FLGS ++FR 
Sbjct: 369  DEGHRLKNSESLTFQALNGLNVRRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRK 428

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
             F+N I  G+  +++ +      ++   L   +  F+ R   +++ K LP K   V+   
Sbjct: 429  NFENAIIRGRDADASDQTKAECEKKLKELGGLVAKFIIRRTNDLLSKYLPVKYEQVVFCG 488

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-------FAGYQALAQIWNHPGILQLTK 1052
            LSP Q  LY+ F          +S+ +I+                L ++ NHP +L L  
Sbjct: 489  LSPFQLSLYRLF----------ISSPEIQALLRGADSQPLKAINILKKLCNHPELLDLPN 538

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 1112
            D     +   ED S           G   R+     +G+N                    
Sbjct: 539  DLRGSEKLQPEDFSG---------AGGSSRD-----KGRNQT-----------------V 567

Query: 1113 ELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
              DYSGK ++L   L  + +   DK ++ S    TLDL E    KL R  K G       
Sbjct: 568  RCDYSGKFMVLERFLHRIHTETNDKIVLISNYTQTLDLFE----KLLRSKKYG------- 616

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
             ++RLDG    ++RQKLV++FN+P N +    L+S++AG  GINL  ANR+I+ D  WNP
Sbjct: 617  -YFRLDGSMTINKRQKLVDQFNDP-NGKEFVFLLSSKAGGCGINLIGANRLILFDPDWNP 674

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTIS 1290
              D QA+ R WR GQ K  F YR +  GT+EEKI++RQ +K+ L++ VVD  +   R  S
Sbjct: 675  AADQQALARVWRDGQKKECFVYRFICTGTIEEKIFQRQASKQALSSAVVDEMEDAERHFS 734

Query: 1291 KEEMLHLFEFGD 1302
             + +  LF F +
Sbjct: 735  LDSLRKLFLFNE 746


>gi|453087791|gb|EMF15832.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
          Length = 978

 Score =  259 bits (663), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 182/596 (30%), Positives = 286/596 (47%), Gaps = 92/596 (15%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            ++  L+ HQ  G++FM+E ++     +K  D G G ILA  MGLGKT Q IA L+T ++ 
Sbjct: 281  LTRSLRPHQRQGVQFMYECVM----GMKDYD-GEGAILADEMGLGKTLQTIALLWTLLKQ 335

Query: 780  VNLG-----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
              +      ++ ALIV PV+++ NW +EF KW  ++   + V+M+E+     R     K 
Sbjct: 336  NPIADAPPVIKKALIVCPVSLVKNWHKEFNKWLGNDR--IGVYMVEN--GKMRLTDFTKG 391

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
            +A   V +IGY     +            +E+  A   G DI++CDE H +K +      
Sbjct: 392  KAYH-VMIIGYEKLTKVQ-----------KELQGA--SGIDIVICDEGHRLKTSTNKAAS 437

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            A+K +  +RR+ L+G+P+QN+L E+Y MVDFV    L     F+  F+ PI   +   + 
Sbjct: 438  AIKTLSTERRVILSGTPVQNDLAEFYTMVDFVNPNILSKYTTFKREFETPIMKSRQPGAA 497

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
             +D++    RS  L      F+ R    ++ K LPPKT +V+  + +  QR++Y+  +  
Sbjct: 498  EKDLEKGEARSEELANLTGKFILRRTAEILDKYLPPKTEYVVFCRPTDAQRQIYRTIIST 557

Query: 1015 HGFT----NDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
              F     +  VS E I          L ++ N P +L  T  KG             E 
Sbjct: 558  QAFATALNSPAVSLELI--------MILKKVCNSPSLLLGTNVKG-------------EE 596

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 1130
            +       ++P    +F++G               +          S K+ +L ++L   
Sbjct: 597  I-------KRP----EFIEG---------------IPRKLLSTPAASAKIQVLDELLVKI 630

Query: 1131 SN-MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
             N   DK ++ S    T+D++   ++ L            G  + RLDG T  S+RQ +V
Sbjct: 631  KNETDDKVVLVSNYTSTMDILAALITSL------------GMSYLRLDGSTPQSKRQDMV 678

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            +RFN          L+S +AG  GINL  A+R+I+ D  WNP  DLQA+ R  R GQ KP
Sbjct: 679  DRFNRSSQSNSFIFLLSAKAGGTGINLIGASRLIMYDLDWNPALDLQAMARIHRDGQKKP 738

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
             F YR +  G M+EKI++RQVTK GLA  +VD +      S  E+  LF   ++++
Sbjct: 739  CFIYRFVTQGAMDEKIFQRQVTKTGLADSIVDGKAAASGFSTAELRDLFSLDEEDD 794


>gi|334332813|ref|XP_001368542.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Monodelphis domestica]
          Length = 1204

 Score =  259 bits (663), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 191/643 (29%), Positives = 285/643 (44%), Gaps = 127/643 (19%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+ + IP +I+  L+ +Q  G +F++ +             G GCIL   MGLGKT QVI
Sbjct: 123  EDGICIPYTINRYLRDYQREGAQFLYGHY----------SLGRGCILGDDMGLGKTVQVI 172

Query: 771  AFLYTAMR------------------------SVNLGLRTALIVTPVNVLHNWKQEFMKW 806
            AFL   +R                        S++   +  LIV P++VL+NWK E   W
Sbjct: 173  AFLAAVLRKKGTRKDIENNMPEFLLKNKKKESSISAPKKMFLIVAPLSVLYNWKDELNTW 232

Query: 807  RPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
                    +V +L    +D         R K G   I  T +  L              +
Sbjct: 233  -----GYFKVTILHGNKKDNELN-----RIKQGKCEIALTTYETL-------------RL 269

Query: 867  CHALQDGPDI----LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
            C  L D   I    ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C+
Sbjct: 270  C--LDDLNSIEWSAIIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCV 327

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
            +D+   G LGS   F+ +F +P+E+GQ   +T  ++    +    L  ++ G+  R    
Sbjct: 328  MDWAMPGLLGSMTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLARKMSGWFLRRTKT 387

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT----------------------ND 1020
            ++K  LP K   ++   L+  Q+ +Y+  L+    T                        
Sbjct: 388  LIKDQLPKKEDRMVYCSLTEFQKAVYQTVLETEDVTLILRAREPCTCHSGRKRKNCCYKT 447

Query: 1021 RVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEK 1080
                E ++  +F+    L ++ NH  +LQ            + ++S  +      +  + 
Sbjct: 448  NSYGETVKALYFSYLAILQKVSNHAALLQA-----------SSNTSKQQETHLKRICNQV 496

Query: 1081 PRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVF 1140
                 DF+Q   D  F             T  +  YSGKM +L  +L  C    DK L+F
Sbjct: 497  FSKFKDFMQKSKDAAF------------ETISDPKYSGKMKVLQQLLNHCKKNRDKVLLF 544

Query: 1141 SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRV 1200
            S S   LD++E Y                G D+ RLDG T+S ER K+V+ FN    + +
Sbjct: 545  SFSTKLLDVLEQY------------CMATGLDYRRLDGSTKSEERVKIVKEFNS--TQDI 590

Query: 1201 KCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGT 1260
               L+ST AG LG+N   AN V+I D +WNP  DLQAI RA+R GQ + V  +RL++ GT
Sbjct: 591  NICLVSTMAGGLGLNFVGANVVVIFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGT 650

Query: 1261 MEEKIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            +EE +Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 651  VEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 693


>gi|68467321|ref|XP_722322.1| hypothetical protein CaO19.12471 [Candida albicans SC5314]
 gi|68467550|ref|XP_722208.1| hypothetical protein CaO19.5004 [Candida albicans SC5314]
 gi|46444164|gb|EAL03441.1| hypothetical protein CaO19.5004 [Candida albicans SC5314]
 gi|46444289|gb|EAL03565.1| hypothetical protein CaO19.12471 [Candida albicans SC5314]
          Length = 848

 Score =  259 bits (663), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 201/642 (31%), Positives = 311/642 (48%), Gaps = 110/642 (17%)

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVK 747
            E+LG      IV    EK  +   +P  I  KL    + HQ+ G++F++      I    
Sbjct: 226  EILG------IVTNPEEKLSKYPDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDA-- 277

Query: 748  SGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFM 804
               +  GCI+A  MGLGKT Q +  ++T +R    G RT    +IV P +++ NW  E +
Sbjct: 278  ---RAKGCIMADEMGLGKTLQCLTLMWTLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIV 334

Query: 805  KWR-PSELKPLRVFMLEDVSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFG 854
            KW     L PL V    D    + +EL   L +W    G      V +I Y   R     
Sbjct: 335  KWLGEGALTPLAV----DGKSTKNSELGTALQQWSTAQGRNIVRPVLIISYETLR----- 385

Query: 855  KHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN 914
            ++V D+    E+         +++ DE H +KN  + T  AL  ++C+RR+ L+G+P+QN
Sbjct: 386  RNV-DKLAGTEV--------GLMLADEGHRLKNGDSLTFTALNSLRCERRVILSGTPIQN 436

Query: 915  NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG 974
            +L EY+ +++F   G+LG+  EF+  ++N I  G+ + ++ E+ +  +++ + L + +  
Sbjct: 437  DLSEYFSLLNFANPGYLGTRIEFKKNYENAILKGRDSTASDEEREKGDKKLNELSQMVSK 496

Query: 975  FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-FA 1033
            F+ R   +++ K LP K  +V+   LSP+Q+ +Y  F          +++ +I+K     
Sbjct: 497  FIIRRTNDILSKYLPIKYEYVLFTGLSPMQKDIYNHF----------ITSPEIKKLMKGT 546

Query: 1034 GYQALAQIW------NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDF 1087
            G Q L  I       NHP +L L         ED E S      DY   I     + N  
Sbjct: 547  GSQPLKAIGMLKKLCNHPDLLDLP--------EDVEGSEEFIPDDYQSSIAGGSASRNRE 598

Query: 1088 LQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN-MGDKSLVFSQSIPT 1146
            +Q           W              +SGK ++L   L   +    DK ++ S    T
Sbjct: 599  IQ----------TW--------------FSGKFLILERFLQKINKETDDKIVLISNYTQT 634

Query: 1147 LDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIS 1206
            LDLIE    K+ R  K G L        RLDG    ++RQKLV++FN+P N      L+S
Sbjct: 635  LDLIE----KMCRYKKYGVL--------RLDGTMNINKRQKLVDKFNDP-NGPEFIFLLS 681

Query: 1207 TRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIY 1266
            ++AG  GINL  ANR++++D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI+
Sbjct: 682  SKAGGCGINLIGANRLVLMDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIF 741

Query: 1267 KRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEFGDDENPD 1307
            +RQ  K  L++ VVD ++ V R  S   +  LF+F  D   D
Sbjct: 742  QRQSMKMSLSSCVVDEKEDVERLFSVANLRQLFKFQPDTQCD 783


>gi|268566403|ref|XP_002639713.1| C. briggsae CBR-RAD-54 protein [Caenorhabditis briggsae]
          Length = 782

 Score =  259 bits (663), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 178/588 (30%), Positives = 292/588 (49%), Gaps = 82/588 (13%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++FMW+ +        +  +  GCI+A  MGLGKT Q I+ L+T +R     
Sbjct: 167  LRPHQRDGVKFMWDCVTGV-----NIPEYHGCIMADEMGLGKTLQCISLLWTLLRQSPDA 221

Query: 784  LRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELL------AKW 834
              T   ++IV P +++ NW +E  KW  + L  + V   +   R+   + L      +K 
Sbjct: 222  CPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMPV---DSGKRELIIQCLNSFMSDSKM 278

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
            R    V +I Y  FR            +   I H+ + G  I++CDE H +KN+   T Q
Sbjct: 279  RCAIPVLIISYETFR------------LYANILHSGEVG--IVICDEGHRLKNSENLTYQ 324

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            AL  +KC RR+ ++G+P+QN+L+EY+ +V+FV  G LG++ EFR +F+N I  G+  +++
Sbjct: 325  ALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADAS 384

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
            +ED K   +++  +   ++  + R    ++ K LP K   +I  K S LQ  LY + ++ 
Sbjct: 385  AEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKLIEC 444

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 1074
                     ++    S  +    L ++ NHP ++              E+    +N    
Sbjct: 445  EKQNRITEKDKGATASALSFITHLKKLCNHPYLVY-------------EELQKPDNR--- 488

Query: 1075 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC-SNM 1133
                 + + ++ F +  N   F                +  +SGKM +L  IL +     
Sbjct: 489  ----FRTKCLSVFPEAFNPKSF----------------DPSFSGKMKVLDYILAVTRKTT 528

Query: 1134 GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN 1193
             DK ++ S    T+D     L KL           +G D+ RLDG     +R K+V+ FN
Sbjct: 529  DDKFVLVSNYTQTIDQF-MALCKL-----------RGYDFVRLDGSMSIKQRSKIVDTFN 576

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
            +P +  + C L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F Y
Sbjct: 577  DPAST-IFCFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKTCFIY 635

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEF 1300
            RL+A G++EEK+++RQ  K+ L++ VVD  + V R  S E++  LF+ 
Sbjct: 636  RLLATGSIEEKMFQRQTHKKALSSCVVDAGEDVARHFSNEQLRELFKL 683


>gi|403291754|ref|XP_003936932.1| PREDICTED: DNA repair and recombination protein RAD54-like [Saimiri
            boliviensis boliviensis]
          Length = 747

 Score =  259 bits (663), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 189/605 (31%), Positives = 295/605 (48%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +  + R++       GCI+A  MGLGKT
Sbjct: 136  KEKFPVHVVVDPILSKVLRPHQREGVKFLWECV--TSRRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ E
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP +         
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPAEELHEGKMSVSSLSSITSLKKLCNHPAL--------- 462

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                                I +K     D  +G  D   F   + +  L      E   
Sbjct: 463  --------------------IYDKCVEQEDGFEGALD--LFPPGYSSKAL------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLF 1298
            +  LF
Sbjct: 661  LKELF 665


>gi|348553527|ref|XP_003462578.1| PREDICTED: DNA repair and recombination protein RAD54 [Cavia
            porcellus]
          Length = 750

 Score =  259 bits (662), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 188/605 (31%), Positives = 297/605 (49%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 138  KEKFPVHVVVDPVLSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 192

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 193  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 249

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 250  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 294

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ E
Sbjct: 295  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQE 354

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI   +  N++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 355  FKKHFELPILKSRDANASEADRQLGEERLQELISIVNRCLIRRTSDILSKYLPVKIEQVV 414

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+ LQ  LYK+FL       + +   K+  S  +   +L ++ NHPG++        
Sbjct: 415  CCRLTSLQTELYKKFLR-QAKPAEELREGKMSVSSLSSITSLKKLCNHPGLI-------- 465

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D  +G  D   F   + +  L      E   
Sbjct: 466  ----------------YDKCVEEE-----DGFEGALD--IFPPGYSSKAL------EPQL 496

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 497  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 543

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 544  RLDGTMSIKKRAKIVERFNSPSSPEF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 602

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 603  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQNVERHFSLGE 662

Query: 1294 MLHLF 1298
            +  LF
Sbjct: 663  LKELF 667


>gi|400592549|gb|EJP60713.1| DNA repair protein, SNF2 family [Beauveria bassiana ARSEF 2860]
          Length = 721

 Score =  259 bits (662), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 209/646 (32%), Positives = 309/646 (47%), Gaps = 102/646 (15%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII 740
            LD  L   +  E+LG   T     V +E     V +   ++  L+ HQV G++FM+  + 
Sbjct: 94   LDSPLVHKSLTEILGIKKT-----VEKEHPRVPVVLDPRLTKILRPHQVEGVKFMYRCVS 148

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVL 796
              I       K  GCI+A  MGLGKT Q I  L+T ++ S + G   ++ A++V P +++
Sbjct: 149  GLI-----DTKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKPTIQKAIVVCPASLV 203

Query: 797  HNWKQEFMKWR-PSELKPLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-N 850
             NW  E +KW   + + P  +      E+++R  R   +A  R+    V ++ Y   R N
Sbjct: 204  KNWANELIKWLGANAITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLN 263

Query: 851  LSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGS 910
            +   KH K                 +L CDE H +KN  ++T  AL  +   RR+ LTG+
Sbjct: 264  VEELKHTKI---------------GLLFCDEGHRLKNGDSNTFNALNNLNVSRRVILTGT 308

Query: 911  PLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYE 970
            P+QN+L EY+ +  F     LGS  EFR RF+ PI  G+  +++ ED     QR      
Sbjct: 309  PIQNDLTEYFSLTSFANPELLGSRLEFRKRFEIPILRGRDADASEED----KQRGDACTT 364

Query: 971  QLKG----FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVS 1023
            +L G    F+ R   +++ K LP K   V+   L+P Q  LY  F+   D+      + S
Sbjct: 365  ELLGIVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGKGS 424

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 1083
                          L ++ NHP +L L  D+  P  E    S      DY   I ++ R 
Sbjct: 425  QP------LKAINILKKLCNHPDLLVL--DEDLPGSEYCFPS------DY---IPKEAR- 466

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQ 1142
                  G++ +    K W              YSGKM +L  +L  +  +  DK ++ S 
Sbjct: 467  ------GRDRE---VKPW--------------YSGKMQVLDRMLARIRQDTNDKIVLISN 503

Query: 1143 SIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKC 1202
               TLDL E    KL R  + G L        RLDG    ++RQKLV+RFN+P       
Sbjct: 504  YTSTLDLFE----KLCRSRQYGCL--------RLDGTMNVNKRQKLVDRFNDPEGDEF-V 550

Query: 1203 TLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTME 1262
             L+S++AG  GINL  ANR+I+ D  WNP  D QA+ R WR GQ K  F YR +A GT+E
Sbjct: 551  FLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIE 610

Query: 1263 EKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            EKI++RQ  K+ L++ VVD  + V R  S++ +  LF++  D   D
Sbjct: 611  EKIFQRQSHKQSLSSCVVDSAEDVERHFSRDSLRELFQYRSDTRSD 656


>gi|296207850|ref|XP_002750833.1| PREDICTED: DNA repair and recombination protein RAD54-like
            [Callithrix jacchus]
          Length = 746

 Score =  259 bits (662), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 192/604 (31%), Positives = 296/604 (49%), Gaps = 86/604 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 135  KEKFPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 189

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +       
Sbjct: 190  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDD 249

Query: 824  RDRRAELLAKWRA---KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVC 879
             D++ E     R       + +I Y  FR L  G               LQ G   +++C
Sbjct: 250  IDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGLVIC 294

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ EF+ 
Sbjct: 295  DEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKK 354

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
             F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+  +
Sbjct: 355  HFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCR 414

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR 1059
            L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++    DK     
Sbjct: 415  LTPLQTELYKRFLR-QAKPAEELHEGKMSVSSLSSITSLKKLCNHPALIH---DK----- 465

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
                            V GE      D  +G  D   F   + +  L      E   SGK
Sbjct: 466  ---------------CVEGE------DGFEGALD--LFPPGYSSKAL------EPQLSGK 496

Query: 1120 MVLLLDILTM---CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-R 1175
            M++L  IL +   CS+  DK ++ S    TLDL E             KL +  +  Y R
Sbjct: 497  MLVLDYILAVTRSCSS--DKVVLVSNYTQTLDLFE-------------KLCRARRYLYVR 541

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D 
Sbjct: 542  LDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDE 600

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEM 1294
            QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E+
Sbjct: 601  QAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGEL 660

Query: 1295 LHLF 1298
              LF
Sbjct: 661  KELF 664


>gi|322701898|gb|EFY93646.1| recombinational repair protein [Metarhizium acridum CQMa 102]
          Length = 819

 Score =  259 bits (662), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 192/625 (30%), Positives = 299/625 (47%), Gaps = 89/625 (14%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    V +E+ +  V +   ++  L+ HQV G++FM+  +   I      +K  GCI+
Sbjct: 146  ILGIRKKVTKEQSQVPVVLDPKLAKILRPHQVEGVKFMYRCVTGMIE-----EKANGCIM 200

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q I  ++T ++ S   G   ++ A++V P +++ NW  E  KW   + + 
Sbjct: 201  ADEMGLGKTLQCITLMWTLLKQSPEAGKPTIQKAIVVCPASLVKNWANELTKWLGANAIT 260

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      E+++R  R   +A  R+    V ++ Y   R N+   KH K         
Sbjct: 261  PFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI-------- 312

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
                    +L CDE H +KN+ ++T  AL  +   RR+ LTG+P+QN+L EY+ +  F  
Sbjct: 313  -------GLLFCDEGHRLKNSDSNTFNALNSLDVSRRVILTGTPIQNDLTEYFSLTSFAN 365

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS  EFR RF+ PI  G+  +++  D +  ++ +  L   +  F+ R   +++ K 
Sbjct: 366  PDLLGSRLEFRKRFEIPILRGRDADASESDRQRGDECTAELLGIVNKFLIRRTNDILSKY 425

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   +SP Q  LY  F+   D+      + S              L ++ NH
Sbjct: 426  LPVKYEHVVFCSISPFQASLYNYFITSPDIQALLRGKGSQP------LKAINILKKLCNH 479

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L L+ D   P  E                    P       +G++ D          
Sbjct: 480  PDLLNLSDD--LPGSE----------------CCFPPEYTPKEARGRDRD---------- 511

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                      +YSGKM++L  +L  +  +  DK ++ S    TLDL E    +L R  + 
Sbjct: 512  -------VRPEYSGKMMVLDRMLARIRQDTNDKIVLISNYTSTLDLFE----RLCRSRQY 560

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    ++RQKLV+RFN+P N      L+S++AG  GINL  ANR++
Sbjct: 561  GCL--------RLDGTMNVNKRQKLVDRFNDP-NGEEFVFLLSSKAGGCGINLIGANRLV 611

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  
Sbjct: 612  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSA 671

Query: 1283 QQVHRTISKEEMLHLFEFGDDENPD 1307
            + V R  S + +  LF++  +   D
Sbjct: 672  EDVERHFSLDSLRELFQYRPNTTSD 696


>gi|431901320|gb|ELK08347.1| DNA excision repair protein ERCC-6 [Pteropus alecto]
          Length = 1491

 Score =  259 bits (662), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 197/642 (30%), Positives = 297/642 (46%), Gaps = 110/642 (17%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            E  +IP  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+IA
Sbjct: 490  EGFKIPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQIIA 539

Query: 772  FL----YTAMRSVNL------------GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLR 815
            FL    Y+ +R+               GL   +IV P  V+H W +EF  W P    P R
Sbjct: 540  FLAGLSYSKIRTRGSNYRQVLLCRLFDGLGPTIIVCPTTVMHQWVKEFHMWWP----PFR 595

Query: 816  VFML-EDVSRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG 873
            V +L E  S  R+ E L +  A+  G+ +  Y+  R       +   +++    H     
Sbjct: 596  VAILHESGSCTRKKEKLIRDIARCHGILITSYSYIR-------LMQDDISSHDWH----- 643

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
               ++ DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+
Sbjct: 644  --YVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGT 701

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPK 991
               F  +F  PI  G ++N++   VK   + + +L + +  + ++RM  +V +   LP K
Sbjct: 702  LPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDK 761

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
               V+  +L+  Q ++Y+ F+D       R+ N +++   F+G  AL +I NHP +    
Sbjct: 762  NEQVLFCRLTDEQHKVYQNFIDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--- 814

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                                         P+N    L+G  DD           L E  +
Sbjct: 815  --------------------------SGGPKN----LKGIPDDE----------LGEDQF 834

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
                 SGKM+++  +L +    G + L+FSQS   L ++E +L              +  
Sbjct: 835  GYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLGILEIFLR------------AQNY 882

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
             + ++DG T  + RQ L+ R+NE  +  +   L++TR G LG+NL  ANRVII D  WNP
Sbjct: 883  SYLKMDGTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNP 940

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            + D QA  RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R    
Sbjct: 941  STDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLINRVLKDPKQRRFFKS 1000

Query: 1292 EEMLHLFEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 1332
             ++  LF     +        +   G GS  Q +   LK KL
Sbjct: 1001 NDLYELFTLTSPDASQNTETSAIFAGTGSDVQASKLHLKRKL 1042


>gi|344231402|gb|EGV63284.1| hypothetical protein CANTEDRAFT_106747 [Candida tenuis ATCC 10573]
          Length = 817

 Score =  259 bits (662), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 189/610 (30%), Positives = 302/610 (49%), Gaps = 108/610 (17%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAHTMGLGKTFQV 769
             V I   ++  L+ HQV G++F++        +  SG    K  GCI+A  MGLGKT Q 
Sbjct: 223  PVVIDPRLAKILRPHQVEGVKFLY--------RCTSGLIDPKAKGCIMADEMGLGKTLQC 274

Query: 770  IAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRD 825
            IA ++T ++    G +T    +IV P +++ NW  E +KW     L PL +   + V   
Sbjct: 275  IALMWTLLKQSPRGRKTISKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDG-KSVKNS 333

Query: 826  RRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
               + L +W    G      V +I Y   R     +HV D+    E+         +++ 
Sbjct: 334  EIGDSLKQWSVASGRNVVRPVLIISYETLR-----RHV-DKLSGTEV--------GLMLA 379

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN  + T  AL +++C+RR+ L+G+P+QN+L EY+ +++F    +LG+ ++FR 
Sbjct: 380  DEGHRLKNGDSLTFNALNELRCERRVILSGTPIQNDLSEYFSLLNFSNPNYLGTRNDFRR 439

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
             ++N I  G+  +++ ++ +  +++ + L   +  F+ R   +++ K LP K   VI V 
Sbjct: 440  NYENDILRGRDADASDKERESGDKKLNELTTLVSRFIIRRTNDILSKYLPIKYEHVIFVN 499

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA--------LAQIWNHPGILQLT 1051
            LSPLQ +LY  F          +++ +I+K    G+ +        L ++ NHP +L L 
Sbjct: 500  LSPLQTKLYNFF----------ITSPEIKK-LLKGHGSQPLKAIGLLKKLCNHPNLLNLP 548

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
            +D       D       ++ DY      K R +  +L GK             +L    Y
Sbjct: 549  EDL------DGCQELMPDDYDY------KKREVQTWLSGK-----------FSILERFLY 585

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
            K                +    GDK ++ S    TLDLIE    ++ R  + G L     
Sbjct: 586  K----------------LHHETGDKIVLISNYTQTLDLIE----RMCRVKRYGNL----- 620

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
               RLDG    ++RQKLV+RFN+P  K     L+S++AG  GINL  ANR++++D  WNP
Sbjct: 621  ---RLDGTMNINKRQKLVDRFNDPDGKEF-IFLLSSKAGGCGINLIGANRLVLIDPDWNP 676

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTIS 1290
              D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K  L++ VVD +  V R  S
Sbjct: 677  AADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKVDVERLFS 736

Query: 1291 KEEMLHLFEF 1300
             + +  LF+F
Sbjct: 737  ADNLKQLFQF 746


>gi|158258659|dbj|BAF85300.1| unnamed protein product [Homo sapiens]
          Length = 747

 Score =  259 bits (662), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 189/605 (31%), Positives = 296/605 (48%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVSSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPAEELLEGKMSVSSLSSITSLKKLCNHPALI-------- 463

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D   G  D   F   + +  L      E   
Sbjct: 464  ----------------YDKCVEEE-----DGFVGALD--LFPPGYSSKAL------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLF 1298
            +  L 
Sbjct: 661  LKELL 665


>gi|341883705|gb|EGT39640.1| hypothetical protein CAEBREN_07872 [Caenorhabditis brenneri]
          Length = 1092

 Score =  259 bits (661), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 181/600 (30%), Positives = 294/600 (49%), Gaps = 92/600 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++FMW+ +        +  +  GCI+A  MGLGKT Q I+ L+T +R     
Sbjct: 462  LRPHQREGVKFMWDCVTGV-----NIPEFHGCIMADEMGLGKTLQCISLLWTLLRQSPDA 516

Query: 784  LRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRV----------------FMLEDVSR 824
              T   ++IV P +++ NW +E  KW  + L  + V                 +L++  R
Sbjct: 517  CPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLSAMPVDSGKREQIIASLSESSVVLQNKLR 576

Query: 825  DRRAELLA--KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
               A  +A  K R    V +I Y  FR            +   I H+ + G  I++CDE 
Sbjct: 577  -FPASFMADSKMRCAIPVLIISYETFR------------LYANILHSGEVG--IVICDEG 621

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN+   T QAL  +KC RR+ ++G+P+QN+L+EY+ +V+FV  G LG++ EFR +F+
Sbjct: 622  HRLKNSDNLTYQALSGLKCVRRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFE 681

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
            N I  G+  +++SED K   +++  +   ++  + R    ++ K LP K   +I  K S 
Sbjct: 682  NAILKGRDADASSEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYEHIICCKNST 741

Query: 1003 LQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA 1062
            LQ  LY + ++          ++    S  +    L ++ NHP ++       Y   +  
Sbjct: 742  LQETLYNKLIECEKQNRIAEKDKGATASALSFITHLKKLCNHPYLV-------YEEFQKP 794

Query: 1063 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 1122
            ++   D             + ++ F +  N   F                +  +SGKM +
Sbjct: 795  DNRFRD-------------KCLSAFPESFNPKSF----------------DPSFSGKMKV 825

Query: 1123 LLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            L  IL +      DK ++ S    T+D     L KL           +G D+ RLDG   
Sbjct: 826  LDYILAVTRKTTDDKFVLVSNYTQTIDQF-MALCKL-----------RGYDFVRLDGSMS 873

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
              +R K+V+ FN+P +  + C L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R 
Sbjct: 874  IKQRSKIVDTFNDP-SSSIFCFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARV 932

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEF 1300
            WR GQ K  F YRL+A G++EEK+++RQ  K+ L++ VVD  + V R  S E++  LF+ 
Sbjct: 933  WRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGEDVARHFSNEQLRELFKL 992


>gi|170593189|ref|XP_001901347.1| DNA excision repair protein ERCC-6 [Brugia malayi]
 gi|158591414|gb|EDP30027.1| DNA excision repair protein ERCC-6, putative [Brugia malayi]
          Length = 1103

 Score =  259 bits (661), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 188/606 (31%), Positives = 290/606 (47%), Gaps = 107/606 (17%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
             ++IP     KL  +Q  G+R  W N +         ++ +G ILA  MGLGKT QVI+F
Sbjct: 220  GIKIPKDCWEKLYKYQKTGVR--WLNELH--------NQCVGGILADEMGLGKTVQVISF 269

Query: 773  L----YTAMRSVNL---GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
            L    ++ +        GL   LI+ P  ++  W +EF  W P  L  + +  +      
Sbjct: 270  LRGLAFSCLEDRGFSFSGLGPVLIICPTTLIRQWLKEFRTWFP--LCRVAILHISGSFHG 327

Query: 826  RRAELLAKW---RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
            + A+L+ K    ++ G V L  Y  F              A+   H +      ++ DE 
Sbjct: 328  QSAQLIRKMVVSQSDGSVLLTSYGTF--------------AKNRKHLIDKVWHYIILDEG 373

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H I+N  A  T A+K+++   R+ L+GSPLQN+L E + ++DFV  G LG+   F ++F 
Sbjct: 374  HKIRNPDAQITLAVKEIRTPHRLILSGSPLQNSLRELWSLIDFVYPGRLGALKSFMDKFS 433

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD------LPPKTVFVI 996
             PI  G + N+T+  V+   + + IL + +  ++ R     +KKD      LP KT  V+
Sbjct: 434  IPITQGGYANATAVQVRTAYKCACILRDAINPYLLRR----LKKDVEMSIHLPTKTEQVL 489

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
               ++P QR+LY+ +L       DR+ + K+    F G   L ++ NHP ++      G 
Sbjct: 490  FCNITPCQRKLYEEYLSSR--ECDRILSGKM--DAFVGLITLRKLCNHPDLVT-----GG 540

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
            P++ +  D ++DE M +    G   R                                  
Sbjct: 541  PNKFNDYDVTADEEMGF----GAPCR---------------------------------- 562

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            SGKM +L  +L +    G K L+FSQS   L ++E +            + ++  ++ R+
Sbjct: 563  SGKMQVLKALLKLWKRQGQKVLLFSQSRQMLTILEKF------------VIQERYEYLRM 610

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG T    RQ LVE FN+  N ++   L++TR G LGINL  ANRV+I D  WNP+ D+Q
Sbjct: 611  DGTTVVRSRQLLVEEFNK--NNKIFIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQ 668

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            A  RAWR GQ + V  YRL+  GT+EEKIY RQ+ K  L+ R++   +  R     E+  
Sbjct: 669  ARERAWRIGQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVDPRQRRFFKTNELHE 728

Query: 1297 LFEFGD 1302
            LF  GD
Sbjct: 729  LFCLGD 734


>gi|294657478|ref|XP_459783.2| DEHA2E10934p [Debaryomyces hansenii CBS767]
 gi|199432721|emb|CAG88022.2| DEHA2E10934p [Debaryomyces hansenii CBS767]
          Length = 1157

 Score =  259 bits (661), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 179/617 (29%), Positives = 292/617 (47%), Gaps = 101/617 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
             ++P  I   L  +Q   ++++WE   Q            G I+   MGLGKT Q+I+FL
Sbjct: 350  FKLPGDIYPSLFDYQKTCVQWLWELYSQKT----------GGIIGDEMGLGKTIQIISFL 399

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR-RAELLA 832
               +    L  +  L+V P  V++ W  EF +W P    PLR  +L  +     +  + +
Sbjct: 400  -AGLHYSGLLEKPVLVVVPATVMNQWVNEFHRWWP----PLRCVILHSIGSGMGKNAIHS 454

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC------------- 879
            + + +  +     ++ +N SF K +     A+EI   + +   +LV              
Sbjct: 455  EEKIEAFLETTDPSSVKNDSF-KGINSHMRAKEIIDTVMEKGHVLVTTYVGLRIYSKFIL 513

Query: 880  ---------DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
                     DE H I+N  +D +   KQ+K   RI L+G+P+QNNL+E + + DF+  G 
Sbjct: 514  PRQWGYVVLDEGHKIRNPDSDISLTCKQIKTYNRIILSGTPIQNNLIELWSLFDFIFPGR 573

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 990
            LG+   F  +F  PI  G + N+++  V+   + + IL + +  ++ R   + V +DLP 
Sbjct: 574  LGTLPVFEQQFSVPINMGGYANASNVQVQTGYKCAVILRDLISPYLLRRLKSDVAQDLPK 633

Query: 991  KTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGI 1047
            K   V+ VKL+  Q+ LY++FL   DLH          K +++   G   L +I NHP +
Sbjct: 634  KNEMVLFVKLTQYQQDLYEKFLSSEDLHAIL-------KGKRNILMGVDILRKICNHPDL 686

Query: 1048 LQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
            +          RE                I ++ +N N                      
Sbjct: 687  V---------DRE----------------ILQRRKNYN---------------------- 699

Query: 1108 EHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
               Y     SGK+ +L ++L +    G ++L+F Q+   LD++E +++ LP   + G+  
Sbjct: 700  ---YGNPAKSGKLQVLKNLLQLWQMQGHRTLLFCQTKQMLDILEKFVTNLPSLNENGEEV 756

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
            +   ++ R+DG T    RQ LV+ FNE  +K+    L++T+ G LGINL  A+RVII D 
Sbjct: 757  RGTFNYLRMDGSTNIGRRQALVDTFNE--DKQYHVFLLTTKVGGLGINLTGADRVIIYDP 814

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
             WNP+ D+QA  RAWR GQ K +  YRLM  G++EEKIY RQ+ K  L  +++   +  R
Sbjct: 815  DWNPSTDIQARERAWRLGQKKDITIYRLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQRR 874

Query: 1288 TISKEEMLHLFEFGDDE 1304
                 ++  LF  GD +
Sbjct: 875  FFKVNDLHDLFSLGDQD 891


>gi|344302287|gb|EGW32592.1| hypothetical protein SPAPADRAFT_51134 [Spathaspora passalidarum NRRL
            Y-27907]
          Length = 831

 Score =  259 bits (661), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 191/609 (31%), Positives = 297/609 (48%), Gaps = 96/609 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   ++  L+ HQV G++F++      I       +  GCI+A  MGLGKT Q +A +
Sbjct: 230  VVIDPKLAKILRPHQVAGVKFLYRCTAGLI-----DPRAKGCIMADEMGLGKTLQCLALM 284

Query: 774  YTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRAE 829
            +T +R    G RT    +IV P +++ NW  E +KW     L PL V      S D    
Sbjct: 285  WTLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSNDL-GL 343

Query: 830  LLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAH 883
             L +W    G      V ++ Y   R     ++V D+    E+         +++ DE H
Sbjct: 344  ALQQWSTATGRNVVRPVLIVSYETLR-----RNV-DKLAGTEV--------GLMLADEGH 389

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
             +KN  + T  AL  +KC+RR+ L+G+P+QN+L EY+ +++F   G+LG+ ++F+  F+N
Sbjct: 390  RLKNGDSLTFTALNSLKCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFKRNFEN 449

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
             I  G+  ++T ++    +++   L + +  F+ R   +++ K LP K  +V+   LSP+
Sbjct: 450  VILRGRDADATDKERAKSDEKLTELSQMVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPM 509

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFA-GYQALAQIW------NHPGILQLTKDKGY 1056
            Q  LY  F          +++ +I+K     G Q L  I       NHP +L L      
Sbjct: 510  QSALYNYF----------ITSPEIKKLLRGTGSQPLKAIGLLKKLCNHPDLLNLP----- 554

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
               +D E        DY+  IG   RN               + W              +
Sbjct: 555  ---DDIEGCEELIPEDYSSSIGASGRNRE------------IQTW--------------F 585

Query: 1117 SGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            SGK ++L   L  + +   DK ++ S    TLDLIE    K+ R  K G L        R
Sbjct: 586  SGKFMILERFLHQINTETNDKIVLISNYTQTLDLIE----KMCRYKKYGVL--------R 633

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG    ++RQKLV++FN+P        L+S++AG  GINL  ANR++++D  WNP  D 
Sbjct: 634  LDGTMNINKRQKLVDKFNDPDGSEF-IFLLSSKAGGCGINLIGANRLVLIDPDWNPASDQ 692

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEM 1294
            QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K  L++ VVD ++ V R  S + +
Sbjct: 693  QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVERLFSADNL 752

Query: 1295 LHLFEFGDD 1303
              LF +  D
Sbjct: 753  RQLFLYAPD 761


>gi|432853422|ref|XP_004067699.1| PREDICTED: DNA repair and recombination protein RAD54-like [Oryzias
            latipes]
          Length = 733

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 187/599 (31%), Positives = 296/599 (49%), Gaps = 92/599 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G+RF+WE +  + R++       GCI+A  MGLGKT Q IA ++T +R    G
Sbjct: 142  LRPHQREGVRFLWECV--TGRRIPGSH---GCIMADEMGLGKTLQCIALVWTLLRQSPDG 196

Query: 784  ---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG- 839
               +  A++V+P +++ NW  E  KW    + P+ +   +  S++     L  + ++ G 
Sbjct: 197  KPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVSPVAI---DGGSKEEIDRQLVNFVSQNGL 253

Query: 840  -----VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
                 + +I Y  FR            +   + H  + G  +++CDE H +KN    T Q
Sbjct: 254  RVPTPILIISYETFR------------LHAAVLHRGRVG--LVICDEGHRLKNADNQTYQ 299

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            AL  +K QRR+ ++G+P+QN+L+EY+ +V FV  G LGS+ +F+ RF+ PI  G+  +++
Sbjct: 300  ALNAMKAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGSAQDFKKRFELPILKGRDADAS 359

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
              D +   ++   L   +   + R   +++ K LP K   V+  +L+PLQ  LY+ FL  
Sbjct: 360  DADRRAGEEKLKELIGIVNRCLIRRTSDILSKYLPVKVEQVVCCRLTPLQAELYRLFLR- 418

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 1074
                   +    +  S  +   +L ++ NHP ++    DK                    
Sbjct: 419  QAKPLQTLQQGSMNVSSLSSITSLKKLCNHPTLIH---DK-------------------- 455

Query: 1075 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE-HTYKELD--YSGKMVLLLDILTMC- 1130
             V GE              +GF   D   DL    ++ KE++   SGKM++L  IL M  
Sbjct: 456  CVSGE--------------EGF---DGALDLFPPGYSSKEVEPQLSGKMLVLDYILAMTR 498

Query: 1131 SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLV 1189
            +   DK ++ S    TLDL E             KL +  +  Y RLDG     +R K+V
Sbjct: 499  TTTSDKVVLVSNYTQTLDLFE-------------KLCRSRRYLYVRLDGSMSIKKRAKMV 545

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            ERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K 
Sbjct: 546  ERFNSPSSPDF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKT 604

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGDDENPD 1307
             + YRL+  GT+EEKI +RQ  K+ L++ VVD +Q V R  S  E+  LF   ++   D
Sbjct: 605  CYVYRLLTTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRELFTLNEETASD 663


>gi|348522722|ref|XP_003448873.1| PREDICTED: DNA repair and recombination protein RAD54 [Oreochromis
            niloticus]
          Length = 747

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 185/615 (30%), Positives = 300/615 (48%), Gaps = 80/615 (13%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            ++   +EK    V +   +   L+ HQ  G++FMWE +  + R++       GCI+A  M
Sbjct: 134  LIKADKEKLPVHVVVDPVLGKVLRPHQRQGVKFMWECV--TGRRIPGS---YGCIMADEM 188

Query: 762  GLGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFM 818
            GLGKT Q I  ++T +R        +  A++V+P +++HNW  E  KW  + + PL +  
Sbjct: 189  GLGKTLQCITLMWTLLRQSPDTKPEIDKAIVVSPSSLVHNWYNEVRKWLGTRITPLAIDG 248

Query: 819  LEDVSRDRRAELLAK---WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPD 875
                  +++ E        RA   + +I Y  FR            +  E+ H  + G  
Sbjct: 249  GSKEGINKQLESFVSQRSLRAHTPILIISYETFR------------LHAEVLHRGKVG-- 294

Query: 876  ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
            +++CDE H +KN+   T QAL  +  QRR+ ++G+P+QN+L+EY+ +V FV  G LG+S 
Sbjct: 295  LIICDEGHRLKNSDNQTYQALNTMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTSQ 354

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFV 995
            EF+ RF+ PI  G+  +++ ++     ++   L   +   + R   +++ K LP K   +
Sbjct: 355  EFKKRFELPILKGRDADASDKERLSGEEKLKELISIVNRCLIRRTSDILSKYLPMKIEQI 414

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +  +L+PLQ  LYK FL       + +   KI  S  +   +L ++ NHP ++    +K 
Sbjct: 415  VCCRLTPLQTELYKHFLK-QAKPIETLQKGKISVSSLSSITSLKKLCNHPALIY---EKC 470

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
                E  E +      +Y+       +++   L G                         
Sbjct: 471  VEREEGFEGALELFPPNYST------KDVEPQLSG------------------------- 499

Query: 1116 YSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
               KM++L  IL M  +  GDK ++ S    TLDL E             KL +  +  Y
Sbjct: 500  ---KMLVLDYILAMTKTTTGDKVVLVSNYTQTLDLFE-------------KLCRSRRYLY 543

Query: 1175 -RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
             RLDG     +R K+VE+FN P N      ++S++AG  G+NL  ANR+++ D  WNP  
Sbjct: 544  VRLDGTMSIKKRAKIVEKFNSPSNPEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 602

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKE 1292
            D QA+ R WR GQ K  + YRL++ GT+EEKI +RQ  K+ L++ VVD +Q V R  S  
Sbjct: 603  DEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLG 662

Query: 1293 EMLHLFEFGDDENPD 1307
            E+  LF   ++   D
Sbjct: 663  ELRELFTLNEETTSD 677


>gi|348507212|ref|XP_003441150.1| PREDICTED: DNA excision repair protein ERCC-6 [Oreochromis niloticus]
          Length = 1436

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 183/608 (30%), Positives = 283/608 (46%), Gaps = 107/608 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R+MWE   Q            G IL   MGLGKT QVI
Sbjct: 484  DEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQA----------GGILGDEMGLGKTIQVI 533

Query: 771  AFL----YTAMRSVN-----LGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            +FL    Y+ +R+        GL   +IV P  V+H W +EF  W P      RV +L +
Sbjct: 534  SFLAGLSYSKLRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPL----FRVAVLHE 589

Query: 822  VSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                   + +L+ +  A  G+ +  Y+A RN+     + D +               ++ 
Sbjct: 590  TGSFTSNKEKLIPEIAACHGILITSYSAVRNMQETLQLYDWHY--------------IIL 635

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T A KQ +   R  L+GSP+QNNL E + + DFV  G LG+   F  
Sbjct: 636  DEGHKIRNPNAGVTVACKQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFME 695

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 997
            +F  PI  G ++N++   V+   + + +L + +  + ++RM  +V     LP K   V+ 
Sbjct: 696  QFSVPITMGGYSNASPVQVQTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLF 755

Query: 998  VKLSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
             +L+  QR++Y+ FLD   ++   N  +         F+G  AL +I NHP +       
Sbjct: 756  CRLTEEQRQVYQSFLDSKEVYQILNGDM-------QVFSGLIALRKICNHPDLF-----S 803

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
            G P                              L+G  +D          L  E  +   
Sbjct: 804  GGPR----------------------------ILRGIPED---------QLTEEEHFGFW 826

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGK++++  +L +      + L+F+QS   LD++E ++             +    + 
Sbjct: 827  KRSGKLIVVESLLRLWFRQSHRVLLFTQSRQMLDILEVFVR------------ENNYSYL 874

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            ++DG T  S RQ L+ R+NE  +K +   L++T+ G LG+NL  ANRVII D  WNP+ D
Sbjct: 875  KMDGTTTISSRQPLIARYNE--DKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTD 932

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
             QA  RAWR GQ + V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++
Sbjct: 933  TQARERAWRIGQKQQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDI 992

Query: 1295 LHLFEFGD 1302
              LF   D
Sbjct: 993  YELFTLAD 1000


>gi|1495708|emb|CAA66380.1| RAD54 [Mus musculus]
          Length = 747

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 295/607 (48%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPVLSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +       
Sbjct: 191  LQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDE 250

Query: 824  RDRRAELLAKWRA---KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 880
             DR+ E     R       + +I Y  FR L  G  +K  N+             +++CD
Sbjct: 251  IDRKLEGFMNQRGARVPSPILIISYETFR-LHVGV-LKKGNVG------------LVICD 296

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HEF+  
Sbjct: 297  EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKH 356

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM----NVVKKDLPPKTVFVI 996
            F+ PI   +   ++  D     QR      +L G V R  +    +++ K LP K   V+
Sbjct: 357  FELPILKSRDAAASEAD----RQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPEEELREGKMSVSSLSSITSLKKLCNHPALI-------- 463

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D  +G    G F   + +  +      E   
Sbjct: 464  ----------------YDKCVAEE-----DGFEGTL--GIFPPGYNSKAV------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRVRRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 661  LKELFTL 667


>gi|426215442|ref|XP_004001981.1| PREDICTED: DNA repair and recombination protein RAD54-like [Ovis
            aries]
          Length = 749

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 188/605 (31%), Positives = 295/605 (48%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G+ F+W+ +  + R++       GCI+A  MGLGKT
Sbjct: 137  KEKLPVHVVVDPILSKVLRPHQREGVEFLWKCV--TGRRIPGSH---GCIMADEMGLGKT 191

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 192  LQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVGKWLGGRIQPLAI---DGGS 248

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 249  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 293

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ E
Sbjct: 294  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQE 353

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++ ED ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 354  FKKHFELPILKGRDAAASEEDRRVGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 413

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++    DK  
Sbjct: 414  CCRLTPLQIELYKRFLR-QAKPAEELREGKMSVSSLSSITSLKKLCNHPALIY---DKCV 469

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
               +  E +                  ++ F  G N                    E   
Sbjct: 470  EEEDGFEGT------------------LDIFPPGYNSKAL----------------EPQL 495

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 496  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 542

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 543  RLDGTMSIKKRAKVVERFNNPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 601

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 602  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 661

Query: 1294 MLHLF 1298
            +  LF
Sbjct: 662  LKELF 666


>gi|171906595|ref|NP_033041.3| DNA repair and recombination protein RAD54-like [Mus musculus]
 gi|171906597|ref|NP_001116430.1| DNA repair and recombination protein RAD54-like [Mus musculus]
 gi|171906599|ref|NP_001116431.1| DNA repair and recombination protein RAD54-like [Mus musculus]
 gi|51316197|sp|P70270.2|RAD54_MOUSE RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=RAD54 homolog; Short=mHR54; Short=mRAD54
 gi|148698674|gb|EDL30621.1| RAD54 like (S. cerevisiae) [Mus musculus]
          Length = 747

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 295/607 (48%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +       
Sbjct: 191  LQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDE 250

Query: 824  RDRRAELLAKWRA---KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 880
             DR+ E     R       + +I Y  FR L  G  +K  N+             +++CD
Sbjct: 251  IDRKLEGFMNQRGARVPSPILIISYETFR-LHVGV-LKKGNVG------------LVICD 296

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HEF+  
Sbjct: 297  EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKH 356

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM----NVVKKDLPPKTVFVI 996
            F+ PI   +   ++  D     QR      +L G V R  +    +++ K LP K   V+
Sbjct: 357  FELPILKSRDAAASEAD----RQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPEEELREGKMSVSSLSSITSLKKLCNHPALI-------- 463

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D  +G    G F   + +  +      E   
Sbjct: 464  ----------------YDKCVAEE-----DGFEGTL--GIFPPGYNSKAV------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRVRRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 661  LKELFTL 667


>gi|254570653|ref|XP_002492436.1| DNA-dependent ATPase [Komagataella pastoris GS115]
 gi|238032234|emb|CAY70235.1| DNA-dependent ATPase [Komagataella pastoris GS115]
 gi|328353550|emb|CCA39948.1| DNA repair and recombination protein RAD54 and RAD54-like protein
            [Komagataella pastoris CBS 7435]
          Length = 838

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 220/710 (30%), Positives = 337/710 (47%), Gaps = 115/710 (16%)

Query: 625  IGGKRKQKKKIRRILDDAE-----LGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSV 679
            +G KRK     R + D        L + T   I   KE  +RL+  Q +   + K    +
Sbjct: 144  LGTKRKPTLPPRPLHDPMSEYAIVLYDPTVDIIPEIKEEDDRLRKEQEELEMERKKAEQI 203

Query: 680  T-LDGDLSAGASI-EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWE 737
            T  +  +  G S+ E+LG A  G   + +++     V I   ++  L+ HQ+ G++F++ 
Sbjct: 204  TNKNKRIKPGKSLAEILGIAKDG---SSLKKYPNVPVVIDPKLAKILRPHQISGVKFLF- 259

Query: 738  NIIQSIRKVKSG---DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVT 791
                   +  SG       GCI+A  MGLGKT Q IA L+T +R    G +T   A++V 
Sbjct: 260  -------RCTSGLVDASAKGCIMADEMGLGKTLQCIALLWTLLRQSPRGTKTIEKAIVVC 312

Query: 792  PVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRAEL---LAKWRAKGG------VF 841
            P +++ NW  EF KW     L PL +    D    + + +   L++W    G      V 
Sbjct: 313  PSSLVKNWANEFDKWLGKGTLTPLAI----DGKSAKGSTISSQLSQWAMATGRNIVRPVL 368

Query: 842  LIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKC 901
            ++ Y   R          RN+  E     + G  +++ DE H +KN  + T  AL  + C
Sbjct: 369  IVSYETLR----------RNV--ESLKGTKVG--LMLADEGHRLKNGDSLTFTALNSLDC 414

Query: 902  QRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 961
            +RR+ L+G+P+QN+L EY+ ++ F   G LG+ +EFR  ++NPI  G+ + +  ++ +  
Sbjct: 415  ERRVILSGTPIQNDLSEYFSLLTFANPGLLGTRNEFRKNYENPILRGRDSLADDKEREKG 474

Query: 962  NQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDR 1021
            +Q+   L E +  F+ R   +++ K LP K  +VI   LS  Q+ LY+RF      +   
Sbjct: 475  DQKLKELTEIVARFIIRRTNDILSKYLPVKYEYVIFCNLSETQKSLYQRFTASKSIS--- 531

Query: 1022 VSNEKIRKSFFAGYQALAQIW------NHPGILQLTKDKGYPSREDAEDSSSDENMDYNV 1075
                K+ K    G Q+L  I        HP +L L +D      E  E+   D   DY+ 
Sbjct: 532  ----KLVKEVGGGAQSLQSIGLLKKLCTHPNLLNLPEDI-----EGCENLLPD---DYDY 579

Query: 1076 VIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN-MG 1134
              G + RN              +   W             +S K ++L   L   +    
Sbjct: 580  GHGNR-RNR-------------EVQVW-------------HSSKFLILQRFLYKINKETN 612

Query: 1135 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 1194
            DK ++ S    TLDLIE    KL    + G L        RLDG    ++RQKLV++FN 
Sbjct: 613  DKIVIISNYTQTLDLIE----KLCISSRYGSL--------RLDGTMNINKRQKLVDKFNN 660

Query: 1195 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYR 1254
            P  K     L+S++AG  GINL  ANR+I+VD  WNP  D QA+ R WR GQTK  F YR
Sbjct: 661  PEGKEF-VFLLSSKAGGCGINLIGANRLILVDPDWNPASDQQALARVWRDGQTKNCFIYR 719

Query: 1255 LMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLFEFGDD 1303
             +A G++EEKI++RQ  K  L++ VVD    V R  S + +  LF+F ++
Sbjct: 720  FIATGSIEEKIFQRQSAKLQLSSCVVDSNDDVERLFSADNLKQLFQFKEN 769


>gi|50290001|ref|XP_447432.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526742|emb|CAG60369.1| unnamed protein product [Candida glabrata]
          Length = 942

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 184/585 (31%), Positives = 292/585 (49%), Gaps = 89/585 (15%)

Query: 738  NIIQSIRKVKSGDKG-LGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPV 793
            + +++++K +S ++G  GCI+A  MGLGKT Q IA ++T +R    G R     +IV P 
Sbjct: 357  DFLEALKKSQSNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLISKCIIVCPS 416

Query: 794  NVLHNWKQEFMKWR-PSELKPLRVFMLEDV---SRDRRAELLAKWRAKGG------VFLI 843
            ++++NW  E +KW  P+ L PL V   +          AE +  W    G      V +I
Sbjct: 417  SLVNNWANELVKWLGPNTLSPLAVDGKKSSLASGATSVAEAIKNWAQAQGRNIVKPVLII 476

Query: 844  GYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQ 902
             Y   R          RN+ +     LQ+    +L+ DE H +KN  + T  AL  + C 
Sbjct: 477  SYDTLR----------RNVKQ-----LQNTEVGLLLADEGHRLKNGDSLTFTALDSINCP 521

Query: 903  RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMN 962
            RR+ L+G+P+QN+L EY+ +++F   G LG+ +EFR  F+ PI   +  ++T  DVK   
Sbjct: 522  RRVILSGTPIQNDLSEYFALLNFSNPGLLGTRNEFRRNFEIPILRSRDADATDNDVKSGE 581

Query: 963  QRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTN 1019
            Q+  +L   +  F+ R   +++ K LP K   VI V L+P Q+++Y   +   D+     
Sbjct: 582  QKLQLLSNIVSKFIIRRTNDILSKYLPCKYEHVIFVNLTPFQKQVYNMLIKSRDIKKVVK 641

Query: 1020 DRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGE 1079
                ++ ++         L ++ NHP +++L ++    +  D  D       DY++  G 
Sbjct: 642  GDGGSQPLK-----AIGVLKKLCNHPDLIKLDEELDNYNDLDIPD-------DYSIPTG- 688

Query: 1080 KPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSL 1138
            K R++                            +  +SGK  +L   L  + +   DK +
Sbjct: 689  KSRDV----------------------------QTQFSGKFAILERFLHKIKTESDDKIV 720

Query: 1139 VFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNK 1198
            + S    TLDLIE    ++ R      +        RLDG    ++RQKLV+RFN+P  +
Sbjct: 721  LISNYTQTLDLIE----RMCRNRHYASV--------RLDGTMSINKRQKLVDRFNDPEGQ 768

Query: 1199 RVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAH 1258
                 L+S++AG  GINL  ANR+I++D  WNP  D QA+ R WR GQ K  F YR ++ 
Sbjct: 769  EF-IFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFIST 827

Query: 1259 GTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEFGD 1302
            GT+EEKIY+RQ  K  L++ VVD ++ V R  S + +  LF+F D
Sbjct: 828  GTIEEKIYQRQSMKMSLSSCVVDAKEDVERLFSVDNLRQLFQFND 872


>gi|51316190|sp|O12944.1|RAD54_CHICK RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=Putative recombination factor GdRad54;
            AltName: Full=RAD54 homolog
 gi|1905887|gb|AAB54115.1| putative recombination factor GdRad54 [Gallus gallus]
          Length = 733

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 180/593 (30%), Positives = 288/593 (48%), Gaps = 82/593 (13%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +S  L+ HQ  G++F+W+ +    R++       GCI+A  MGLGKT Q I  ++T +R 
Sbjct: 138  LSRVLRPHQREGVKFLWDCVTS--RRIPGSH---GCIMADEMGLGKTLQCITLMWTLLRQ 192

Query: 780  ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV--FMLEDVSRDRRAELLAK- 833
                   +  A++V+P +++ NW  E  KW    ++PL +     E++ R     +  + 
Sbjct: 193  SPDCKPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGSMNQRG 252

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADT 892
             R    + +I Y  FR      H +          ALQ G   +++CDE H +KN+   T
Sbjct: 253  LRVPSPILIISYETFR-----LHAE----------ALQKGSVGLVICDEGHRLKNSENQT 297

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
             QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ EF+  F+ PI  G+  +
Sbjct: 298  YQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDAD 357

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ++  + +   +R   L   +   + R   +++ K LP K   V+  +L+PLQ  LYK FL
Sbjct: 358  ASEAERQKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFL 417

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
                   + +   KI  S  +   +L ++ NHP ++                        
Sbjct: 418  K-QAKPVEELKEGKINVSSLSSITSLKKLCNHPALI------------------------ 452

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC-S 1131
            Y+  + E             ++GF          +     E   SGKM++L  IL +  S
Sbjct: 453  YDKCVEE-------------EEGFMGALDLFPAGYSTKSVEPQLSGKMLVLDYILAVTKS 499

Query: 1132 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVE 1190
               DK ++ S    TLDL E             KL +  +  Y RLDG     +R K+VE
Sbjct: 500  TSNDKVVLVSNYTQTLDLFE-------------KLCRNRRYLYVRLDGTMSIKKRAKVVE 546

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
            RFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  
Sbjct: 547  RFNSPSSPEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTC 605

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGD 1302
            + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E+  LF   +
Sbjct: 606  YIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGELKELFSLNE 658


>gi|367011473|ref|XP_003680237.1| hypothetical protein TDEL_0C01370 [Torulaspora delbrueckii]
 gi|359747896|emb|CCE91026.1| hypothetical protein TDEL_0C01370 [Torulaspora delbrueckii]
          Length = 869

 Score =  258 bits (659), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 195/625 (31%), Positives = 295/625 (47%), Gaps = 105/625 (16%)

Query: 716  IPSSISAKL----KAHQVVGIRFMWENIIQSIRK-------VKSGDK------------- 751
            IP  I  KL    + HQV G+RF++  +   + K       VK+G               
Sbjct: 237  IPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDQETVKNGSAEVGTEVGKEVVIN 296

Query: 752  --GLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKW 806
                GCI+A  MGLGKT Q IA ++T +R    G   +   +IV P ++++NW  E +KW
Sbjct: 297  RGAYGCIMADAMGLGKTLQCIALMWTLLRQGPQGKKLIDKCIIVCPSSLVNNWANELVKW 356

Query: 807  R-PSELKPLRVFMLEDVSRDRRAELLAKWRAKG---GVFLIGYTAFRNLSFGKHVKDRNM 862
              P+ L PL +   +  S      + A+ + +     V +I Y   R             
Sbjct: 357  LGPNVLTPLAIDGKKTTSVSESIRVWAQAQGRNIVKPVLIISYETLR------------- 403

Query: 863  AREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
             R +         +++ DE H +KN  + T  +L  + C RR+ L+G+P+QN+L EY+ +
Sbjct: 404  -RNVEQLKNTRVGLMLADEGHRLKNADSLTFTSLDSIDCPRRVILSGTPIQNDLSEYFAL 462

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
            ++F   G LG+  +FR  F+NPI   +  ++T + +K   ++   L   +  F+ R   +
Sbjct: 463  LNFSNPGLLGTRSDFRKNFENPILLSRDADATDDQIKKGQEQLQKLSYVVSKFIIRRAND 522

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            ++ K LP K   VI V L P Q+ LY+R +     T     NE   +   A  Q L ++ 
Sbjct: 523  ILAKYLPCKYEHVIFVNLRPFQKDLYERSVKSREITKMVKGNEAGSQPLKAIGQ-LKKLC 581

Query: 1043 NHPGILQLTKD----KGYPSREDAE-DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
            NHP +L   +D     G    +D E  SSS+ N   NV                      
Sbjct: 582  NHPDLLNFEEDLDNLDGLNIPDDYEIPSSSNTNFRRNV---------------------- 619

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSK 1156
                           + ++SGK  +L   L T+ S   DK ++ S    TLDLIE    +
Sbjct: 620  ---------------QTEFSGKFAILERFLKTIRSQSDDKIVLISNYTQTLDLIE----R 660

Query: 1157 LPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
            L R      L        RLDG    ++RQKLV+RFN+P  +     L+S++AG  GINL
Sbjct: 661  LCRHKHYASL--------RLDGTMNINKRQKLVDRFNDPEGQEF-IFLLSSKAGGCGINL 711

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              ANR+I++D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKIY+RQ  K  L+
Sbjct: 712  IGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIYQRQSMKMSLS 771

Query: 1277 ARVVDRQQ-VHRTISKEEMLHLFEF 1300
            + VVD Q+ V R  + + +  LF++
Sbjct: 772  SCVVDAQEDVERLFTTDNLRMLFKY 796


>gi|291398984|ref|XP_002715711.1| PREDICTED: RAD54-like protein [Oryctolagus cuniculus]
          Length = 755

 Score =  258 bits (659), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 187/607 (30%), Positives = 295/607 (48%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +  + R++       GCI+A  MGLGKT
Sbjct: 144  KEKLPVHVVVDPVLSKVLRPHQREGVKFLWECV--TSRRIPGSH---GCIMADEMGLGKT 198

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 199  LQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 255

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 256  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 300

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +  +RR+ ++G+P+QN+L+EY+ +V FV  G LG++ E
Sbjct: 301  VICDEGHRLKNSENQTYQALDSLNTRRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQE 360

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI   +   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 361  FKKHFELPILKSRDAAASEADRQLGEERLRELTGVVNRCLIRRTSDILSKYLPVKIEQVV 420

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++    DK  
Sbjct: 421  CCRLTPLQTELYKRFLR-QAKPAEELHEGKMSVSSLSSITSLKKLCNHPALIY---DKCV 476

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
               +  E +                  ++ F  G N                    E   
Sbjct: 477  EEEDGFEGA------------------LDIFPPGYNSKAI----------------EPQL 502

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 503  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 549

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 550  RLDGTMSIKKRAKVVERFNSPTSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 608

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 609  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 668

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 669  LKELFTL 675


>gi|326925324|ref|XP_003208867.1| PREDICTED: DNA repair and recombination protein RAD54-like [Meleagris
            gallopavo]
          Length = 792

 Score =  258 bits (659), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 181/598 (30%), Positives = 286/598 (47%), Gaps = 82/598 (13%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +S  L+ HQ  G++F+W+ +    R++       GCI+A  MGLGKT Q I  ++T +R 
Sbjct: 197  LSRVLRPHQREGVKFLWDCVTS--RRIPGSH---GCIMADEMGLGKTLQCITLMWTLLRQ 251

Query: 780  ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK--- 833
                   +  A++V+P +++ NW  E  KW    ++PL +        DR+         
Sbjct: 252  SPDCKPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGFMNQRG 311

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADT 892
             R    + +I Y  FR      H +          ALQ G   +++CDE H +KN+   T
Sbjct: 312  LRVPSPILIISYETFR-----LHAE----------ALQKGTVGLVICDEGHRLKNSENQT 356

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
             QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ EF+  F+ PI  G+  +
Sbjct: 357  YQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDAD 416

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ++  + +   +R   L   +   + R   +++ K LP K   V+  +L+PLQ  LYK FL
Sbjct: 417  ASEAERQKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFL 476

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
                   + +   KI  S  +   +L ++ NHP ++                        
Sbjct: 477  K-QAKPVEELKEGKINVSSLSSITSLKKLCNHPALI------------------------ 511

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC-S 1131
            Y+  + E             ++GF          +     E   SGKM++L  IL +  S
Sbjct: 512  YDKCVEE-------------EEGFMGALDLFPAGYSTKSVEPQLSGKMLVLDYILAVTKS 558

Query: 1132 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVE 1190
               DK ++ S    TLDL E             KL +  +  Y RLDG     +R K+VE
Sbjct: 559  TSNDKVVLVSNYTQTLDLFE-------------KLCRNRRYLYVRLDGTMSIKKRAKVVE 605

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
            RFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  
Sbjct: 606  RFNSPSSPEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTC 664

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGDDENPD 1307
            + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E+  LF   +    D
Sbjct: 665  YIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGELKELFALNETTTSD 722


>gi|383847118|ref|XP_003699202.1| PREDICTED: DNA repair and recombination protein RAD54B-like
            [Megachile rotundata]
          Length = 856

 Score =  258 bits (659), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 173/576 (30%), Positives = 282/576 (48%), Gaps = 82/576 (14%)

Query: 709  KGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ 768
            K E+ V + + +   L+ HQ  GI F++E     I  +K+ +   G ILA  MGLGKT Q
Sbjct: 265  KDEKEVSVDACLVNVLRQHQRYGIIFLYE----CIMGIKTSNY-YGAILADEMGLGKTLQ 319

Query: 769  VIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
             I  ++T ++    G   L+T LIVTP ++ +NW +EF  W         V   ++  +D
Sbjct: 320  CITLVWTLLKKGPYGSPVLKTVLIVTPSSLCNNWNKEFKHWLGFHRLCPYVVNAKNKLKD 379

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMI 885
             + +      A+  V +I Y     +   + ++  N             D+++CDE H +
Sbjct: 380  FKKQ------ARNSVVIISYDML--IRCEEEIEQINF------------DLIICDEGHRL 419

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN      + L  + C+RRI LTG+P+QN+L E++ +V+FV  G LGS++EF+N ++NPI
Sbjct: 420  KNNEIKAAKLLSNINCKRRILLTGTPIQNDLQEFFALVNFVNPGILGSNNEFKNYYENPI 479

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
               +  ++      +  +R+  L+E+ + F+ R   + + K LP K   V+  +LS  Q 
Sbjct: 480  VASKCPHAAYSVASLGTERATELHEKTRSFILRRTQDTINKYLPSKHELVVFCRLSDEQE 539

Query: 1006 RLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDS 1065
            +LY    D   F    + N  +          L +I NHP +    K++ +       +S
Sbjct: 540  KLYSLVTDT-WFNKSVLPNSNV--PHLTVITTLKKICNHPKLFYNEKNEFW------NNS 590

Query: 1066 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLD 1125
            + + N   N+                                ++T +E  Y GK+ ++  
Sbjct: 591  AINLNGTTNIC-------------------------------KYTSRE-QYCGKISVVQT 618

Query: 1126 ILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSER 1185
            ++    N  +K ++ S    TLDL+E   S             +G  + RLDG T ++ R
Sbjct: 619  LMKNLKNTDEKLVLISYYTQTLDLLETVCS------------TEGLHFLRLDGSTPATTR 666

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
             K++E+FN   N   K  L+S +AG +G+NL  A+R+I+ D  WNP  D QA+ R WR G
Sbjct: 667  SKIIEQFNSK-NHNSKIFLLSAKAGGVGLNLFGASRLILFDSDWNPASDSQAMARIWRDG 725

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            Q K V+  RL+  GT+EEKI++RQV+K GL+  VVD
Sbjct: 726  QKKDVYILRLLTTGTIEEKIFQRQVSKAGLSETVVD 761


>gi|20987234|gb|AAH21643.1| RAD54 like (S. cerevisiae) [Mus musculus]
          Length = 747

 Score =  258 bits (659), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 190/607 (31%), Positives = 295/607 (48%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +       
Sbjct: 191  LQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDE 250

Query: 824  RDRRAELLAKWRA---KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 880
             DR+ E     R       + +I Y  FR L  G  +K  N+             +++CD
Sbjct: 251  IDRKLEGFMNQRGARVPSPILIISYETFR-LHVGV-LKKGNVG------------LVICD 296

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HEF+  
Sbjct: 297  EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKH 356

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM----NVVKKDLPPKTVFVI 996
            F+ PI   +   ++  D     QR      +L G V R  +    +++ K LP K   V+
Sbjct: 357  FELPILKSRDAAASEAD----RQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPEEELREGKMSVSSLSSITSLKKLCNHPALI-------- 463

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D  +G    G F   + +  +      E   
Sbjct: 464  ----------------YDKCVAEE-----DGFEGTL--GIFPPGYNSKAV------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRVRRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 661  LKELFTL 667


>gi|302780671|ref|XP_002972110.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii]
 gi|300160409|gb|EFJ27027.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii]
          Length = 1011

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 189/591 (31%), Positives = 281/591 (47%), Gaps = 109/591 (18%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL-GCILAHTMGLGKTFQVIAFLYTAMR 778
            ++  L+ HQ  G++FM+E +       K+GD    GCILA  MGLGKT Q I  L+T +R
Sbjct: 147  VAKFLRPHQREGVQFMFECVTGLREFSKAGDAAWSGCILADDMGLGKTLQSITLLWTLLR 206

Query: 779  SVNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWR 835
                G   A   +IVTP ++                                        
Sbjct: 207  QGFQGSPIAKRIIIVTPTSL---------------------------------------- 226

Query: 836  AKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQA 895
                + +I Y  FR L  GK  K            +   D+L+CDEAH +KN    T QA
Sbjct: 227  ----ILIISYETFR-LHAGKFQK------------EGACDLLICDEAHRLKNDHTLTNQA 269

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            L  ++C RR+ L+G+P+QN+L E+Y MV+F   G LG    FR  +QNPI  G+   +T 
Sbjct: 270  LASLQCHRRVLLSGTPMQNDLEEFYAMVNFTNPGILGEVAAFRRYYQNPILRGREPEATE 329

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
            +  K+  +RS  L E++  F+ R    ++   LPPK V V+  KL+ LQR LY  F  +H
Sbjct: 330  DARKLGLERSAELSEKVNQFILRRTNALLSNHLPPKIVEVVCCKLTNLQRELYTHF--IH 387

Query: 1016 GFTNDRVS--NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
               N R++  ++  R    A   AL ++ +HP ++  T   G      +E +  +  M +
Sbjct: 388  S-KNVRLALQDKAKRARVLASITALKKLCSHPKLIYDTVRAG-----GSEAAGFENCMQF 441

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSN 1132
                   P+ M    +G   DG + K                 SGKM +L  +L  +   
Sbjct: 442  F------PKEMQTG-RGTPSDGSWVK----------------LSGKMFVLARLLENLRKK 478

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
              D+ ++ S    TLDL     ++L R        ++   + RLDG T   +RQKLV++F
Sbjct: 479  TNDRIVLVSNYTQTLDL----FAQLCR--------ERNYPYVRLDGSTSIGKRQKLVQKF 526

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N+P        L+S++AG  G+NL   NR+++ D  WNP  D QA  R WR GQ K V+ 
Sbjct: 527  NDPSQNEFA-FLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYI 585

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTISKEEMLHLFEFGD 1302
            YR +A GT+EEK+Y+RQ++KEGL   +  D +     +S E++  LF   D
Sbjct: 586  YRFLATGTIEEKVYQRQMSKEGLQKVISGDSKAEVNALSTEDLRDLFTLRD 636


>gi|332808861|ref|XP_513146.3| PREDICTED: DNA repair and recombination protein RAD54-like isoform 2
            [Pan troglodytes]
          Length = 747

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 188/605 (31%), Positives = 296/605 (48%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVSSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPAEELLESKMSVSSLSSITSLKKLCNHPALIH------- 464

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                   D   +E   +   +G     ++ F  G +                    E   
Sbjct: 465  -------DKCVEEEDGF---VGA----LDLFPPGYSSKAL----------------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLF 1298
            +  LF
Sbjct: 661  LKELF 665


>gi|334185464|ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana]
 gi|332642688|gb|AEE76209.1| Rad54-like protein [Arabidopsis thaliana]
          Length = 908

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 191/609 (31%), Positives = 295/609 (48%), Gaps = 85/609 (13%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL----GCILAHTMGLGKTFQ 768
             + + S +   L+ HQ  G++FM++ +        SG  G     GCILA  MGLGKT Q
Sbjct: 169  TIMVHSVLVKFLRPHQREGVQFMFDCV--------SGLHGSANINGCILADDMGLGKTLQ 220

Query: 769  VIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
             I  LYT +     G   ++ A+IVTP +++ NW+ E  KW    ++   +  L + +RD
Sbjct: 221  SITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQ---LIALCESTRD 277

Query: 826  ---RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
                  +   + R+   V +I Y  FR  S            + C +  +  D+L+CDEA
Sbjct: 278  DVLSGIDSFTRPRSALQVLIISYETFRMHS-----------SKFCQS--ESCDLLICDEA 324

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN +  T +AL  + C+RR+ L+G+P+QN+L E++ MV+F   G LG +  FR+ ++
Sbjct: 325  HRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYE 384

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
             PI  G+   +T E+  +   RS  L  ++  F+ R    ++   LPPK + V+  K++ 
Sbjct: 385  APIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTT 444

Query: 1003 LQRRLYKRF-LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            LQ        + L     D     K+     A   AL ++ NHP ++  T   G P    
Sbjct: 445  LQTTYNGCLCMQLKRALADNAKQTKV----LAYITALKKLCNHPKLIYDTIKSGNPGTVG 500

Query: 1062 AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 1121
             E                   N  +F   +   G  +   W     +  + EL  SGKM 
Sbjct: 501  FE-------------------NCLEFFPAEMFSG--RSGAWTG--GDGAWVEL--SGKMH 535

Query: 1122 LLLDILTMCSNMGDKSLVF-SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT 1180
            +L  +L       D  +V  S    TLDL     ++L R        ++   + RLDG T
Sbjct: 536  VLSRLLANLRRKTDDRIVLVSNYTQTLDL----FAQLCR--------ERRYPFLRLDGST 583

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
              S+RQKLV R N+P  K     L+S++AG  G+NL  ANR+++ D  WNP  D QA  R
Sbjct: 584  TISKRQKLVNRLNDP-TKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAAR 642

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT------ISKEEM 1294
             WR GQ K V+ YR ++ GT+EEK+Y+RQ++KEGL  +V+  +Q   +      +S E++
Sbjct: 643  VWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGL-QKVIQHEQTDNSTRQGNLLSTEDL 701

Query: 1295 LHLFEFGDD 1303
              LF F  D
Sbjct: 702  RDLFSFHGD 710


>gi|432908561|ref|XP_004077922.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Oryzias
            latipes]
          Length = 928

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 182/598 (30%), Positives = 298/598 (49%), Gaps = 83/598 (13%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   ++  L+ HQ  G+ F++E ++    +V S     G ILA  MGLGKT Q +A  
Sbjct: 314  VVVDPHLTQHLRPHQRDGLLFLYECVMG--MRVASC---YGAILADEMGLGKTLQSVALS 368

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T ++    G     +  L+VTP +++ NWK EF KW   E   + VF    V +D R E
Sbjct: 369  WTLLKQGPYGGKPVAKRVLVVTPGSLVQNWKAEFNKWLGRER--ISVFT---VDQDHRIE 423

Query: 830  --LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
              +L+   +   V +I Y    R L             E    ++ G  +++CDE H +K
Sbjct: 424  QFVLSPLHS---VLVISYEMLLRCL-------------EQVQKVEFG--LIICDEGHRLK 465

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            N+   T+ AL  + C RR+ LTG+P+QN+L E++ +++FV  G LGS   +R  ++ PI 
Sbjct: 466  NSSIKTSSALTSLSCDRRVILTGTPVQNDLQEFHAIIEFVNPGILGSPTAYRKLYEEPIL 525

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
              +  + T E+  +  +R+  L      F+ R    ++ + LPP+  + +  + S LQ+ 
Sbjct: 526  RSRQPSCTEEERVLGEERAAELSRLTGMFILRRTQEIINRYLPPRVDWTLFCEPSALQQE 585

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS 1066
            LY+R L  H    D +       +  A   AL ++ NHPG+L       Y + ++  +S 
Sbjct: 586  LYQRLL-CHRVFRDCMQGSTQTSTHLACITALKKLCNHPGLL-------YATVKERTESG 637

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
            + E+  Y        R  + F +  +  GF   D                SGK+++L D+
Sbjct: 638  TLESSLYE-------RLADLFPETYSLAGFNTAD----------------SGKLLVLSDL 674

Query: 1127 LTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            L     +   D+ ++ S    TLDL++     +            G  + RLDG+T + +
Sbjct: 675  LAAIRQLSPSDRVVLVSNYTQTLDLLQDLCKHM------------GYTFCRLDGQTPTGQ 722

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            RQ+LV+ FN   ++     L+S++AG +G+NL  A+ +++ D  WNP  D+QA+ R WR 
Sbjct: 723  RQRLVDGFNSSYSQNF-LFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRD 781

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLFEF 1300
            GQ K V  YRL+  GT+EE+IY+RQV+K+GL+  VVD  +   H + S  E+  LF  
Sbjct: 782  GQKKTVHIYRLLTAGTIEERIYQRQVSKQGLSGTVVDMGKGAEHTSFSSSELRDLFSL 839


>gi|380480210|emb|CCF42568.1| SNF2 super family protein [Colletotrichum higginsianum]
          Length = 1153

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 186/612 (30%), Positives = 291/612 (47%), Gaps = 120/612 (19%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            +R+P  I   L A+Q  GI ++ E            ++G+G I+   MGLGKT Q IAF+
Sbjct: 376  LRLPGDIHPSLFAYQKTGIHWLAELY----------EQGVGGIIGDEMGLGKTVQAIAFV 425

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML-------------- 819
                 S  L  +  ++V P  V+  W  EF +W P+    LRV +L              
Sbjct: 426  AALHYSKKLD-KPVIVVVPATVMQQWVNEFHRWWPA----LRVSILHSSGSGMVNVNEDD 480

Query: 820  EDVSRDRR------AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG 873
            +D S  R       A  + K   K G  L+  T +  L   +  +D  +++E  +A    
Sbjct: 481  DDESHYRSGRNGAAAHHIVKRVVKHGHVLV--TTYAGL---QSYEDDLLSQEWGYA---- 531

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
                + DE H I+N  A+ T A K++    R+ L+G+P+QNNL+E + + DF+    LG+
Sbjct: 532  ----ILDEGHKIRNPNAEVTIACKKLNTPHRLILSGTPIQNNLVELWSLFDFIFPMRLGT 587

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKT 992
               FR++F+ PI  G H N+T+  V    + +  L E +  ++ QR+  +V   DLP KT
Sbjct: 588  LVNFRHQFEMPIRMGGHANATNLAVLTAEKCATTLKETISQYLLQRLKTDVAS-DLPEKT 646

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRK-SFFAGYQALAQIWNHPGILQLT 1051
              V+  KL+P Q   Y RF+      +D VS    RK     G   L +I NHP ++ ++
Sbjct: 647  EQVLFCKLTPEQNEEYVRFIH-----SDAVSQIMARKRQALYGIDILRKICNHPDLVNVS 701

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
            K                                      K+  G+   DW +        
Sbjct: 702  K--------------------------------------KSQPGY---DWGSPR------ 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
                 SGK+ ++ ++L M    G K+L+FSQ+   L++++ ++ K+           +G 
Sbjct: 715  ----RSGKLQMVGELLPMWKRFGHKTLLFSQTKIMLNILQEFIGKM-----------EGM 759

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
             + R+DG     +RQ L++RFN   +  +   L++T+ G LG+NL  A R++I D  WNP
Sbjct: 760  RYLRMDGEVAVEKRQALIDRFNN--DPSIDVFLLTTKTGGLGVNLTGATRIVIYDPDWNP 817

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            + DLQA  RAWR GQTKPV  YRLM  GT+EEKIY RQ+ K+ +  +V+   +       
Sbjct: 818  STDLQARERAWRLGQTKPVAIYRLMTSGTIEEKIYHRQIFKQFMTNKVLKDPKQRANFDL 877

Query: 1292 EEMLHLFEFGDD 1303
             ++  LF FGD+
Sbjct: 878  SDLYDLFSFGDN 889


>gi|158293531|ref|XP_557901.3| AGAP008748-PA [Anopheles gambiae str. PEST]
 gi|157016752|gb|EAL40287.3| AGAP008748-PA [Anopheles gambiae str. PEST]
          Length = 789

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 187/600 (31%), Positives = 293/600 (48%), Gaps = 92/600 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKG--LGCILAHTMGLGKTFQVIAFLYTAMRS-- 779
            L+ HQ  G+RFM++ +        +G KG   GCI+A  MGLGKT Q I  L+T +R   
Sbjct: 140  LRPHQREGVRFMYDCV--------TGAKGDFNGCIMADEMGLGKTLQCITLLWTLLRQSP 191

Query: 780  -VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKG 838
                 +  A+IV P +++ NW +EF KW    +  L +   +  S+++  + L ++ A  
Sbjct: 192  DCKPTINKAIIVCPSSLVKNWYKEFGKWLGCRVNCLSI---DGGSKEQTTKELEQYMANQ 248

Query: 839  G------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
                   V +I Y  FR            +   I ++ + G   ++CDE H +KN    T
Sbjct: 249  SQRHGTPVLIISYETFR------------LYAHILNSSEVG--AVLCDEGHRLKNCENLT 294

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
             QAL  +K +RR+ L+G+P+QN+L EYY ++ FV  G LGS+ EFR +F+NPI  GQ  N
Sbjct: 295  YQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSTAEFRKQFENPILRGQDAN 354

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ST  + +   +R   L   +   + R    ++ K LP K   V+ V+++ +Q  LYK FL
Sbjct: 355  STDAEREKAAERLQELAALVNRCMIRRTSALLTKYLPVKFEMVVCVRMTEVQAALYKSFL 414

Query: 1013 DLHGFTNDRVSNEKIRKSFFA--GYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
                     +     + S  A     +L ++ NHP ++       Y   ++  D    EN
Sbjct: 415  QSDTIRRSVMEKNATKASLTALSNITSLKKLCNHPDLV-------YEKIQERADGF--EN 465

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL--T 1128
                +     PR +   L                             G  ++LLD +  +
Sbjct: 466  AATILPDNYSPRELRPEL-----------------------------GAKLMLLDCMLAS 496

Query: 1129 MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
            + +N  DK ++ S    TLDL E    KL R        K+G  + RLDG     +R K+
Sbjct: 497  IKTNTTDKIVLVSNYTQTLDLFE----KLCR--------KRGYGYVRLDGTMTIKKRGKV 544

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            V++FN+P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K
Sbjct: 545  VDQFNQPDSADF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKK 603

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGDDENPD 1307
            P F YRL+A GT+EEKI++RQ  K+ L+  VVD  +   R  +++++  LF+  +    D
Sbjct: 604  PCFIYRLLATGTIEEKIFQRQTHKKALSTTVVDNAEDGERHFTQDDLKDLFKLDEQTRSD 663


>gi|328768836|gb|EGF78881.1| hypothetical protein BATDEDRAFT_12619 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 680

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 206/654 (31%), Positives = 308/654 (47%), Gaps = 105/654 (16%)

Query: 685  LSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIR 744
            LS  A +E L     G    V    GE  V +   +   L+ HQ+ G++F++        
Sbjct: 54   LSEAAKLEALKSTAIGGKGPV----GEVHVVVDPLLGRVLRPHQIEGVQFLYN------- 102

Query: 745  KVKSGDK---GLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG----LRTALIVTPVNVLH 797
               +G++     GCI+A  MGLGKT Q IA L+T +R   +     +  A+I  P +++ 
Sbjct: 103  -CTTGEQVAGAFGCIMADEMGLGKTLQCIALLWTLLRQSPIPGKPWIEKAIIACPSSLVK 161

Query: 798  NWKQEFMKWR-PSELKPLRV---FMLEDVSRDRRAELLAKWRAK-GGVFLIGYTAFRNLS 852
            NW  E  KW   + ++P         E  ++D    + AK R     V ++ Y   R   
Sbjct: 162  NWANELKKWLGENRVRPYSCDNKGTKEQTTKDIEQFVAAKGRGVVNPVLIVSYETLR--- 218

Query: 853  FGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPL 912
                     +   I    + G  +L+CDE H +KN  + T  +L Q+K +RR+ L+G+P+
Sbjct: 219  ---------IYTPILVKTEIG--LLLCDEGHRLKNGDSLTYTSLNQLKAKRRVILSGTPI 267

Query: 913  QNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQL 972
            QN+L EY+ ++ F     LGS  +FR +F+ PI  G+  +++ +D K   +R   L    
Sbjct: 268  QNDLTEYFSLLSFAIPDVLGSEADFRKKFELPILRGRDADASDKDRKTSEERLGELLTTA 327

Query: 973  KGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFF 1032
              F+ R    ++ K LP K  +V+  KLS +Q  +Y+ F       N   + E+  K   
Sbjct: 328  NKFIIRRTAELLTKYLPVKYEYVVFCKLSEMQATIYRHFSKQE--MNKLAAKERGEKPEK 385

Query: 1033 AGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKN 1092
            A    L ++ NHP +L         +R+D EDS                           
Sbjct: 386  A-ITTLKKLVNHPILL---------NRDDMEDS--------------------------- 408

Query: 1093 DDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDL 1149
                     W  +  E ++KE   +YSGKM LL  +L  M +   DK ++ S    TLD 
Sbjct: 409  ---------W--IPKEFSFKECQPEYSGKMYLLERMLCQMHAQSSDKIVLISNYTQTLDA 457

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            IE    K+ R  K    W+      RLDG     +RQKLV+RFN+P        L+S++A
Sbjct: 458  IE----KMCRVRK----WQ----LCRLDGTMTIQKRQKLVDRFNDPTQPEF-IFLLSSKA 504

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G  GINL  ANR+I+ D  WNP  D QA+ R WR GQTK  F YR +A GT+EEKI++RQ
Sbjct: 505  GGCGINLIGANRLILTDPDWNPANDAQALARVWRDGQTKVCFIYRFIATGTIEEKIFQRQ 564

Query: 1270 VTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQ 1322
              K+ L++ VVD +Q V R  S E +  LF++ D    D   A   +  +G  Q
Sbjct: 565  AHKQSLSSCVVDEEQDVERHFSLEALRQLFQYNDQTMSDTHDAFKCKRCRGGKQ 618


>gi|340726376|ref|XP_003401535.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
            terrestris]
          Length = 746

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 182/599 (30%), Positives = 293/599 (48%), Gaps = 86/599 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---V 780
            L+ HQ  G++FM+E +       K  +   GCI+A  MGLGKT Q I  L+T ++     
Sbjct: 152  LRPHQREGVKFMYECVTG-----KRIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 206

Query: 781  NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW---RAK 837
               +  A+IV P +++ NW  E  KW  + ++PL +     V  D +     K    R  
Sbjct: 207  KPLIEKAIIVAPSSLVKNWYNEIFKWLKNRVQPLAIDGGNKVDIDTKLTGFMKTYGRRCI 266

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              + +I Y  FR            +  ++ H  QD   +++CDE H +KN+   T QAL 
Sbjct: 267  NPILIISYETFR------------LHAQVLH--QDEVGLVLCDEGHRLKNSENQTYQALI 312

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             +K +RR+ L+G+P+QN+L+EY+ +V FV +G LG++ EFR +F+ PI  GQ   +T  +
Sbjct: 313  NLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPILRGQDAAATDTE 372

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DL 1014
             K+  +R   L   +   + R    ++ K LP K   V+ +++  LQ  LY  F+    +
Sbjct: 373  RKLAQERLAELVSIVNKCLIRRTSALLSKYLPLKYELVVCIRMGKLQTDLYNSFIQSDSV 432

Query: 1015 HGFTNDRVSNEKIRKSF--FAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
                 +  +N K  KSF   A    L ++  HP    L  DK     +  E+++     +
Sbjct: 433  RKSMEENSANSKKGKSFSTLAAITLLKKLCCHP---DLVYDKILEKSDGFENAAKLMPPN 489

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLDIL-TM 1129
            YN                                     KE+  + SGK+++L  +L ++
Sbjct: 490  YNT------------------------------------KEIMPELSGKLMVLDCLLASI 513

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
             +   DK ++ S    TLDL E    KL          K+  ++ RLDG     +R K+V
Sbjct: 514  KTTTNDKIVLVSNYTQTLDLFE----KL--------CHKRCYNYVRLDGTMTIKKRSKVV 561

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            E+FN+P N      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K 
Sbjct: 562  EKFNDP-NSNDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKL 620

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGDDENPD 1307
             F YR +  GT+EEKI++RQ  K+ L++ VVD+++ V R  +  ++  LF+  ++   D
Sbjct: 621  CFIYRFLCTGTIEEKIFQRQAHKKALSSTVVDQEEDVARHFTLNDLRDLFKLEENTISD 679


>gi|19115202|ref|NP_594290.1| DNA repair protein [Schizosaccharomyces pombe 972h-]
 gi|3123262|sp|P41410.2|RAD54_SCHPO RecName: Full=DNA repair protein rhp54; AltName: Full=RAD54 homolog 1
 gi|2239180|emb|CAB10100.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe]
          Length = 852

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 192/606 (31%), Positives = 300/606 (49%), Gaps = 91/606 (15%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
            AV I   ++  L+ HQ+ G++F+++ +   I +  +G     CI+A  MGLGKT Q IA 
Sbjct: 253  AVVIDPKLARILRPHQIEGVKFLYKCVTGRIDRCANG-----CIMADEMGLGKTLQCIAL 307

Query: 773  LYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 828
            L+T ++ S   G  T   A+I  P +++ NW  E +KW   +   +  F+L+  S  +  
Sbjct: 308  LWTLLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKD--AITPFILDGKSSKQEL 365

Query: 829  EL-LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 881
             + L +W +  G      V +  Y   R  S+ +H+ +  +             +L+CDE
Sbjct: 366  IMALQQWASVHGRQVTRPVLIASYETLR--SYVEHLNNAEIG------------MLLCDE 411

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
             H +KN+ + T  AL ++  QRR+ L+G+P+QN+L EY+ +++F   G LGS  EFR  +
Sbjct: 412  GHRLKNSDSLTFTALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNY 471

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
            + PI  G+  + T +D +  + +   L + +  F+ R   +++ K LP K   V+   LS
Sbjct: 472  EIPILKGRDADGTEKDKENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLS 531

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA---LAQIWNHPGILQLTKDKGYPS 1058
              Q  LYK F+     T+  + N+ +R +     +A   L +I NHP +L LT+D     
Sbjct: 532  EFQLSLYKHFI-----TSPEI-NKILRGTGSQPLKAIGLLKKICNHPDLLNLTEDL---- 581

Query: 1059 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
                      E  +     G  PR +    + +N D                      SG
Sbjct: 582  ----------EGCEALFPPGFIPRELRG--RDRNIDS-------------------SLSG 610

Query: 1119 KMVLLLDILTMCSN-MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            KM++L  +L        DK ++ S    TLDL E    +L R         +G    RLD
Sbjct: 611  KMLVLERMLYQIKQETDDKIVLISNYTSTLDLFE----QLCR--------ARGYKALRLD 658

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G    ++RQ+LV+ FN+P  K     L+S++AG  GINL  ANR+I+ D  WNP  D QA
Sbjct: 659  GTMNVNKRQRLVDTFNDP-EKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQA 717

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLH 1296
            + R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  Q V R  S + +  
Sbjct: 718  LARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERHFSLDNLRQ 777

Query: 1297 LFEFGD 1302
            LF+  D
Sbjct: 778  LFQLND 783


>gi|452690|emb|CAA82750.1| DNA repair protein [Schizosaccharomyces pombe]
          Length = 852

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 192/606 (31%), Positives = 300/606 (49%), Gaps = 91/606 (15%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
            AV I   ++  L+ HQ+ G++F+++ +   I +  +G     CI+A  MGLGKT Q IA 
Sbjct: 253  AVVIDPKLTRILRPHQIEGVKFLYKCVTGRIDRCANG-----CIMADEMGLGKTLQCIAL 307

Query: 773  LYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 828
            L+T ++ S   G  T   A+I  P +++ NW  E +KW   +   +  F+L+  S  +  
Sbjct: 308  LWTLLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKD--AITPFILDGKSSKQEL 365

Query: 829  EL-LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 881
             + L +W +  G      V +  Y   R  S+ +H+ +  +             +L+CDE
Sbjct: 366  IMALQQWASVHGRQVTRPVLIASYETLR--SYVEHLNNAEIG------------MLLCDE 411

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
             H +KN+ + T  AL ++  QRR+ L+G+P+QN+L EY+ +++F   G LGS  EFR  +
Sbjct: 412  GHRLKNSDSLTFTALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNY 471

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
            + PI  G+  + T +D +  + +   L + +  F+ R   +++ K LP K   V+   LS
Sbjct: 472  EIPILKGRDADGTEKDKENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLS 531

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA---LAQIWNHPGILQLTKDKGYPS 1058
              Q  LYK F+     T+  + N+ +R +     +A   L +I NHP +L LT+D     
Sbjct: 532  EFQLSLYKHFI-----TSPEI-NKILRGTGSQPLKAIGLLKKICNHPDLLNLTEDL---- 581

Query: 1059 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
                      E  +     G  PR +    + +N D                      SG
Sbjct: 582  ----------EGCEALFPPGFIPRELRG--RDRNIDS-------------------SLSG 610

Query: 1119 KMVLLLDILTMCSN-MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            KM++L  +L        DK ++ S    TLDL E    +L R         +G    RLD
Sbjct: 611  KMLVLERMLYQIKQETDDKIVLISNYTSTLDLFE----QLCR--------ARGYKALRLD 658

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G    ++RQ+LV+ FN+P  K     L+S++AG  GINL  ANR+I+ D  WNP  D QA
Sbjct: 659  GTMNVNKRQRLVDTFNDP-EKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQA 717

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLH 1296
            + R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  Q V R  S + +  
Sbjct: 718  LARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERHFSLDNLRQ 777

Query: 1297 LFEFGD 1302
            LF+  D
Sbjct: 778  LFQLND 783


>gi|26353994|dbj|BAC40627.1| unnamed protein product [Mus musculus]
          Length = 747

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 189/607 (31%), Positives = 295/607 (48%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +       
Sbjct: 191  LQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDE 250

Query: 824  RDRRAELLAKWRA---KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 880
             DR+ E     R       + +I Y  FR L  G  +K  N+             +++CD
Sbjct: 251  IDRKLEGFMNQRGARVPSPILIISYETFR-LHVGV-LKKGNVG------------LVICD 296

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HEF+  
Sbjct: 297  EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKH 356

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM----NVVKKDLPPKTVFVI 996
            F+ PI   +   ++  D     QR      +L G V R  +    +++ K LP K   V+
Sbjct: 357  FELPILKSRDAAASEAD----RQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPEEELREGKMSVSSLSSITSLKKLCNHPALI-------- 463

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D  +G    G F   + +  +      E   
Sbjct: 464  ----------------YDKCVAEE-----DGFEGTL--GIFPPGYNSKAV------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  +L +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYVLAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRVRRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 661  LKELFTL 667


>gi|46127169|ref|XP_388138.1| hypothetical protein FG07962.1 [Gibberella zeae PH-1]
          Length = 856

 Score =  258 bits (658), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 192/632 (30%), Positives = 304/632 (48%), Gaps = 107/632 (16%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++  +E  R+P  I  +L    + HQV G++FM++ +   I      +K  GCI+
Sbjct: 241  ILGIKKKTDDEHPRVPVVIDPRLAKILRPHQVEGVKFMYQCVTGLI-----DEKANGCIM 295

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q I+ ++T ++ S + G   ++ A++V P +++ NW  E  KW  +    
Sbjct: 296  ADEMGLGKTLQCISLMWTLLKQSPDAGKSTIQKAIVVCPASLVKNWANELTKWLGANA-- 353

Query: 814  LRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFR-NLSFGKHVKDRNMARE 865
            +  F ++   S++     L +W    G      V ++ Y   R N+   K+ K       
Sbjct: 354  INPFAIDGKASKEELTRQLRQWANATGRSVTRPVIIVSYETLRLNVEELKNTKI------ 407

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
                      +L CDE H +KN+ ++T  AL  +   RR+ LTG+P+QN+L EY+ +  F
Sbjct: 408  ---------GLLFCDEGHRLKNSDSNTFNALNSLNVSRRVILTGTPIQNDLTEYFSLTSF 458

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
                 LG+  EFR R++ PI  G+  +++  D K  ++ +  L   +  F+ R   +++ 
Sbjct: 459  ANPDLLGTRLEFRKRYEIPILRGRDADASEADRKKGDECTAALLGVVNKFLIRRTNDILS 518

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            K LP K   V+   L+P Q  LY  F+   ++      + S              L ++ 
Sbjct: 519  KYLPVKYEHVVFCNLAPFQFDLYNYFIKSPEIQALLRGKGSQP------LKAINILKKLC 572

Query: 1043 NHPGILQLTKD-----KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
            NHP +L ++ D     K YP              DY       P+      +G++ +   
Sbjct: 573  NHPDLLNMSDDLPGSEKCYPD-------------DY------VPKEA----RGRDRE--- 606

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSK 1156
             K W              YSGKM +L  +L  +  +  DK ++ S    TLDL E    K
Sbjct: 607  VKSW--------------YSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFE----K 648

Query: 1157 LPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
            L R  + G L        RLDG    ++RQKLV+RFN+P        L+S++AG  GINL
Sbjct: 649  LCRSRQYGSL--------RLDGTMNVNKRQKLVDRFNDPEGDEF-IFLLSSKAGGCGINL 699

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L+
Sbjct: 700  IGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLS 759

Query: 1277 ARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            + VVD  + V R  S + +  LF++  D   D
Sbjct: 760  SCVVDSAEDVERHFSLDSLRELFQYRSDTKSD 791


>gi|410967175|ref|XP_003990097.1| PREDICTED: DNA repair and recombination protein RAD54-like [Felis
            catus]
          Length = 747

 Score =  257 bits (657), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 186/607 (30%), Positives = 291/607 (47%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLAGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGTRVPSPILIISYETFR-LHVG--------------ILQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI   +   ++  D ++   R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKSRDAAASEADRQLGEDRLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+ LQ  LYK+FL       + +   K+  S  +    L ++ NHP ++        
Sbjct: 413  CCRLTSLQTELYKKFLR-QAKPAEELREGKMSVSSLSSITLLKKLCNHPALIY------- 464

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                   D   +E   +   +   P             G+  K             E   
Sbjct: 465  -------DKCVEEEGGFEGALEIFP------------PGYSSKAL-----------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN PL+      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKIVERFNNPLSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 661  LKELFTL 667


>gi|302845062|ref|XP_002954070.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f. nagariensis]
 gi|300260569|gb|EFJ44787.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f. nagariensis]
          Length = 520

 Score =  257 bits (657), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 185/565 (32%), Positives = 282/565 (49%), Gaps = 73/565 (12%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVN-- 781
            L+ HQ  G++FM++ +     + K G     CILA  MGLGKT Q I  L+T + S +  
Sbjct: 12   LRPHQREGVQFMFDCVTGQRLEGKQG-----CILADDMGLGKTLQGITLLWTLLTSGHSL 66

Query: 782  LG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAK 837
            LG     R A+IV P +++ NW  E  KW    LK L   M E    D  A +       
Sbjct: 67   LGGCPIARRAIIVCPTSLVSNWDNECTKWLQGRLKTLA--MCESTREDVVANI------- 117

Query: 838  GGVFLIGYTAFRNL-----SFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
             G+FL     ++ L     +F  H  +R      C       D+LVCDEAH +KN    T
Sbjct: 118  -GMFLHPSNVYKVLIISYETFRMHA-ERLQVPGSC-------DLLVCDEAHRLKNDATLT 168

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
             +AL  + C+RR+ L+G+P+QN+L E++ MVDF   G LG+  +FR  ++ PI  G+  +
Sbjct: 169  NRALDNLPCKRRVLLSGTPMQNHLDEFFAMVDFCNPGVLGAPTQFRKYYELPILAGREPD 228

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            +  E V +  +RS  L      F+ R    ++ + LPPK + V+  +L+ LQR+LY  F 
Sbjct: 229  AAPEQVVLGEERSRELSGLTNNFILRRTNKLLSQHLPPKVIEVVCCRLTELQRQLYHHF- 287

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY-PSREDAEDSSSDENM 1071
             L      RV N +      +   +L ++ NHP ++     + + P    +    SD   
Sbjct: 288  -LQSKAARRVLNGRT-SGVLSAITSLKKLCNHPKLIYDAVHRRFSPGHVRSCSCLSDVGS 345

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMC 1130
             +       P  + D   G+   G     W               SGKM +L  +L  + 
Sbjct: 346  LF-------PPGLFD--NGRVGRGGMAAGWET------------LSGKMAVLARMLHVLY 384

Query: 1131 SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVE 1190
            +   D+ ++ S    +LDL     ++L R        ++G  + RLDG T  ++RQKLV+
Sbjct: 385  TETHDRIVLVSNYTSSLDL----FAQLCR--------ERGYPFVRLDGTTTINKRQKLVK 432

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
             FN+P  ++    L+S++AG  G+NL  ANR+++ D  WNP  D QA  R WR GQ K V
Sbjct: 433  VFNDPAERQFA-FLLSSKAGGCGLNLIGANRLVLFDPDWNPANDQQAAARVWRDGQRKRV 491

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGL 1275
            F YR ++ G++EEK+Y+RQ++KEGL
Sbjct: 492  FVYRFLSTGSIEEKVYQRQLSKEGL 516


>gi|432111345|gb|ELK34622.1| DNA repair and recombination protein RAD54-like protein [Myotis
            davidii]
          Length = 747

 Score =  257 bits (657), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 186/607 (30%), Positives = 299/607 (49%), Gaps = 88/607 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+W+ +    R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWDCVTS--RRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               L+ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHAG--------------VLRKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  + ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEAERQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LY+RFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYQRFLR-QAKPAEELREGKMSVSSLSSITSLKKLCNHPALI-------- 463

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                            Y+  + E+     D  +G  D   F   + + +L      E   
Sbjct: 464  ----------------YDKCVEEE-----DGFEGALD--IFPPGYSSKVL------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 661  LKELFTL 667


>gi|341883189|gb|EGT39124.1| CBN-XNP-1 protein [Caenorhabditis brenneri]
          Length = 1429

 Score =  257 bits (657), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/448 (35%), Positives = 234/448 (52%), Gaps = 64/448 (14%)

Query: 638  ILDDAELGEETKRKIAIEKERQERLKSLQVQF-----------------SSKSKLMNSVT 680
            I+D ++L +ET      EKER++RL+  Q +F                 +S  + + SV 
Sbjct: 464  IMDSSKLAKETVDAEKAEKERRKRLEKKQKEFNGITLEEGEDLTEVLTGTSSQRRLKSVI 523

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII 740
            LD D S+   +                      V + SS+   LK HQ  GI+FM++   
Sbjct: 524  LDPDASSDPKV---------------------PVEVHSSLVRILKPHQAHGIQFMYDCAF 562

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALIVTPVNVLHN 798
            +SI ++    +G G ILAH MGLGKT QVI FL+T M    LG   +  L+V P NV+ N
Sbjct: 563  ESIDRMDK--EGSGGILAHCMGLGKTLQVITFLHTVMMHEKLGEKCKHVLVVVPKNVIIN 620

Query: 799  WKQEFMKWRPSELKPLRVFMLEDV----SRDRRAELLAKWR--AKGGVFLIGYTAFRNLS 852
            W +EF KW     + L    ++++    +   R + L +W       V +IGY  FR L+
Sbjct: 621  WFKEFQKWLEDNDEELATITVDELDSYKTGQERMKALKQWHNSKTPSVMIIGYDMFRILT 680

Query: 853  FGKHVKDRNM--AREICHA-------LQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQ 902
                 K +    AR++          LQD GPD++VCDEAH +KN  +  ++ + ++  +
Sbjct: 681  CEDDPKKKKTQAARKLAKLKDDFRKYLQDPGPDMVVCDEAHKLKNDESALSKTMVKIATR 740

Query: 903  RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMN 962
            RRI LTG+PLQNNLMEY+CMV+FV+ G LG+ +EF NRF N I  G+  +++  +V  M 
Sbjct: 741  RRICLTGTPLQNNLMEYHCMVNFVKPGLLGTKNEFANRFVNIINRGRTKDASQLEVSFMK 800

Query: 963  QRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRV 1022
            +R H+LYE LK  V R D  V+ + +PPK  +VI V+L+  Q +LYK FL       D V
Sbjct: 801  RRCHVLYEHLKKCVDRKDYRVLTEAIPPKQEYVINVRLTERQCKLYKTFL------QDVV 854

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQL 1050
              E + K     Y   ++IW HP  L L
Sbjct: 855  GTEGLSKRLLPDYHMFSRIWTHPFQLIL 882



 Score =  189 bits (480), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 95/220 (43%), Positives = 139/220 (63%), Gaps = 16/220 (7%)

Query: 1094 DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFY 1153
            +G+F KD    L+ +    +   S K+VLL++I+  C  +GDK LVFSQS+ +L LI+  
Sbjct: 997  NGWFAKD---KLVTDDDRDDFTLSNKLVLLMEIIKKCEEIGDKLLVFSQSLESLALIKRM 1053

Query: 1154 LSKLPRPGK-----------QGKLWK--KGKDWYRLDGRTESSERQKLVERFNEPLNKRV 1200
            L  +   G+           +G+ W   +G+D+  +DG  +S +R  +   FN+P N R 
Sbjct: 1054 LEYMAGTGQWFADGHEALNAEGETWSWLEGEDYMTIDGSVQSVKRDAVQTTFNDPENMRA 1113

Query: 1201 KCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGT 1260
            +  LISTRAGSLG N+ +ANRVII D  WNP++D Q+++R +R+GQTKPV+ YR +A GT
Sbjct: 1114 RLMLISTRAGSLGTNMVAANRVIIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGT 1173

Query: 1261 MEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            MEE+IYKRQVTKE  + RVVD  Q+ R     ++  L++F
Sbjct: 1174 MEERIYKRQVTKESTSMRVVDEAQIQRHYLGNDLTELYQF 1213


>gi|169600905|ref|XP_001793875.1| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
 gi|160705541|gb|EAT90036.2| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
          Length = 831

 Score =  257 bits (656), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 187/627 (29%), Positives = 305/627 (48%), Gaps = 97/627 (15%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++  +E  R+P  I  +L    + HQV G++F++      I       K  GCI+
Sbjct: 190  ILGLKKKVDDERPRVPVVIDPRLSKVLRPHQVEGVKFLYRATTGMI-----DPKANGCIM 244

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q IA ++T ++ S + G   ++  +I  P +++ NW  E +KW  P  + 
Sbjct: 245  ADEMGLGKTLQCIALMWTLLKQSPDAGKSTIQKCVIACPSSLVRNWANELVKWLGPDAVT 304

Query: 813  PLRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMARE 865
            P   F ++   S+D   + + +W    G      V ++ Y   R            +  E
Sbjct: 305  P---FAIDGKASKDELIQQIRQWSIASGRSVVRPVLIVSYETLR------------LYVE 349

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
                 Q G  +++CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ +++F
Sbjct: 350  EFGQTQIG--LMLCDEGHRLKNGDSLTFTALNSLNVQRRVILSGTPIQNDLSEYFALLNF 407

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
                +LG+  EFR  ++ PI  G+  N T EDVK  N+R   L   +  F+ R   +++ 
Sbjct: 408  ANPNYLGTRMEFRKHYEIPILRGRDANGTDEDVKKGNERLTELLGLVNKFIIRRTNDILS 467

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            K LP K   V+   L+P Q+ LY  F+   D+      + S              L ++ 
Sbjct: 468  KYLPVKYEHVVFCNLAPFQKELYNHFIKSPDVQSLLRGKGSQP------LKVIGMLKKLC 521

Query: 1043 NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
            NHP +L+L +D              +  +  + V    P++     +G++ +    K W 
Sbjct: 522  NHPDLLELPQDL----------PGCEHTLPEDFV----PKDA----RGRDRE---VKVW- 559

Query: 1103 NDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG 1161
                         YSGKM++L  +L  + +   DK ++ S    TLD+     + L R  
Sbjct: 560  -------------YSGKMLVLDRMLARIRAETNDKIVLISNYTQTLDI----FAALCR-- 600

Query: 1162 KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                   +G    RLDG    S+RQKLV++FN+P        L+S++AG  G+NL  ANR
Sbjct: 601  ------SRGYGCLRLDGTMNVSKRQKLVDKFNDPEGPEF-VFLLSSKAGGCGLNLIGANR 653

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            +++ D  WNP  D QA+ R WR GQ K  F YR +  GT+EEK+++RQ  K+ L++ VVD
Sbjct: 654  LVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVD 713

Query: 1282 R-QQVHRTISKEEMLHLFEFGDDENPD 1307
              + V R  S + +  LF++ ++   D
Sbjct: 714  SAEDVERHFSLDSLRELFQYRNNTTSD 740


>gi|145482121|ref|XP_001427083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394162|emb|CAK59685.1| unnamed protein product [Paramecium tetraurelia]
          Length = 761

 Score =  257 bits (656), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 177/595 (29%), Positives = 277/595 (46%), Gaps = 105/595 (17%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            E   +   +  +L+AHQ+ G+RFM E +       K G    GCILA +MGLGKT Q I 
Sbjct: 137  EGFDVDQFLYKQLRAHQIEGVRFMLECVTG-----KKGKSIRGCILADSMGLGKTLQAIT 191

Query: 772  FLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLED-VSRDRRAE 829
             ++  ++S  +     +I  PV+++ NW++E  KW  P  L+PL     +D V++  +  
Sbjct: 192  LMWILIQSHEIS--KIVITCPVSLIGNWEKEIKKWLGPMRLQPLSAIGTKDEVNKQVKYF 249

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
            L + +     + L  Y  FRN               IC+ +    D+L+CDE H +KN+ 
Sbjct: 250  LYSPY----NLLLTSYETFRN---------------ICNEIDKVIDLLICDEGHRLKNSN 290

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              T QA+ Q+KC+RRI L+G+P+QNN+ E+Y   DFV  G   S   F+  FQ+PIE   
Sbjct: 291  IKTVQAMNQLKCKRRIVLSGTPIQNNMKEFYACCDFVNPGIFSSYKTFKLVFQDPIEMSM 350

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
               S++E V++   RS  L      F+ R    ++ K LP K  ++I   ++P Q+ LYK
Sbjct: 351  EKGSSAETVELGKLRSQELSSLTSQFILRRKPEILSKFLPSKFEYLIFCTMTPQQQVLYK 410

Query: 1010 RFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDE 1069
            R L L               S       L ++  HP ++           ED E  ++++
Sbjct: 411  RSLQL------------CPNSVMMQLNLLRKVTTHPKLI-----------EDDESQAAEK 447

Query: 1070 NMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTM 1129
                                                L    Y+ + ++   +L    +  
Sbjct: 448  ------------------------------------LVVQDYQSVKFNCLKIL----VDQ 467

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
            C    +K ++ S    TLD IE  L +          W     + RLDG+    +R  LV
Sbjct: 468  CKEQNEKVVINSYYRQTLDQIEHNLIQ----------W--NLKFLRLDGKVVQKQRLTLV 515

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            + FN+  +K +   L++ ++G  G+NL  AN++I V+  WNP  D Q + R WR GQ K 
Sbjct: 516  DEFNK--DKDITVFLLNGKSGGTGLNLVGANKMICVEVDWNPANDSQVMGRIWRDGQQKQ 573

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            V  YRL+  GT EEKI +RQ+TKE L+  +VD + +    + EE+  L  + D +
Sbjct: 574  VHIYRLITCGTYEEKIMQRQLTKENLSQNIVDEKSLQNQFTTEELKDLLTYKDSQ 628


>gi|294656433|ref|XP_002770263.1| DEHA2D05456p [Debaryomyces hansenii CBS767]
 gi|199431470|emb|CAR65619.1| DEHA2D05456p [Debaryomyces hansenii CBS767]
          Length = 838

 Score =  257 bits (656), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 189/606 (31%), Positives = 303/606 (50%), Gaps = 94/606 (15%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAHTMGLGKTFQV 769
             V I   ++  L+ HQ+ G++F++        +  SG    +  GCI+A  MGLGKT Q 
Sbjct: 237  PVVIDPRLAKILRPHQIAGVKFLY--------RCTSGLIDPRAKGCIMADEMGLGKTLQC 288

Query: 770  IAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRD 825
            +A ++T ++    G RT    +IV P +++ NW  E +KW     L PL V      S D
Sbjct: 289  LALMWTLLKQSPRGKRTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAVDGKSTKSSD 348

Query: 826  RRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
               + L +W    G      V +I Y   R     ++V D+    E+         +++ 
Sbjct: 349  L-GQALQQWSVATGRNIVRPVLIISYETLR-----RNV-DKLAGTEV--------GLMLA 393

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN  + T  AL  ++C+RR+ L+G+P+QN+L EY+ +++F   G+LG+ ++FR 
Sbjct: 394  DEGHRLKNGDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRK 453

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
             F++ I  G+  ++T ++ ++ +++   L + +  F+ R   +++ K LP K  +V+ V 
Sbjct: 454  NFESAILRGRDADATDKEKEVSDKKLTELSQMVSKFIIRRTNDILSKYLPVKYEYVVFVG 513

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-FAGYQALAQIWNHPGILQLTKDKGYPS 1058
            LSP+Q++LY+ F          V++ +I+K     G Q L  I    G+L+   +     
Sbjct: 514  LSPMQKKLYEYF----------VTSPEIKKLLKGVGSQPLKAI----GMLKKLCNHPDLL 559

Query: 1059 REDAEDSSSDENM--DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                +    D  +  DY   IG   R+               + W              +
Sbjct: 560  NLPDDLDGCDSLIPEDYVPAIGNGNRSRE------------IQTW--------------F 593

Query: 1117 SGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            SGK +LL   L  + +   DK ++ S    TLDLIE    K+ R  K   +        R
Sbjct: 594  SGKFMLLERFLHKIRTETNDKIVLISNYTQTLDLIE----KMCRYKKYANV--------R 641

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG    ++RQKLV+RFN+P        L+S++AG  GINL  ANR+I++D  WNP  D 
Sbjct: 642  LDGTMNINKRQKLVDRFNDPEGSEF-IFLLSSKAGGCGINLIGANRLILIDPDWNPASDQ 700

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEM 1294
            QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K  L++ VVD ++ V R  S + +
Sbjct: 701  QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVERLFSADNL 760

Query: 1295 LHLFEF 1300
              LFEF
Sbjct: 761  KQLFEF 766


>gi|310789538|gb|EFQ25071.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001]
          Length = 1153

 Score =  257 bits (656), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 184/614 (29%), Positives = 290/614 (47%), Gaps = 124/614 (20%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            +++P  I   L A+Q  G+ ++ E            ++G+G I+   MGLGKT Q IAF+
Sbjct: 377  LKLPGDIHPSLFAYQKTGVNWLAELY----------EQGVGGIIGDEMGLGKTVQAIAFV 426

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRDR 826
              A+    +  +  ++V P  V+  W  EF +W P+    LRV +L        +V+ D 
Sbjct: 427  -AALHYSKILDKPVIVVVPATVMQQWVNEFHRWWPA----LRVSILHSSGSGMINVNEDD 481

Query: 827  RAE--------------LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
              E              ++ +    G V +  Y    +       +D  ++ E  +A   
Sbjct: 482  DDEPYSGSGKNGPAARQIIKRVVKHGHVLVTTYAGLHSY------QDELLSYEWGYA--- 532

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                 V DE H I+N  AD T A K++    R+ L+G+P+QNNL+E + + DF+    LG
Sbjct: 533  -----VLDEGHKIRNPNADITIACKKLNTPHRLILSGTPIQNNLVELWSLFDFIYPMRLG 587

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQL-KGFVQRMDMNVVKKDLPPK 991
            +   FR +F+ PI  G H N+T+  V    + +  L E + K  +QR+  +V   DLP K
Sbjct: 588  TLVSFRQQFEMPIRMGGHANATNLAVLTAEKCATTLKEAISKYLLQRLKTDVAS-DLPEK 646

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSN--EKIRKSFFAGYQALAQIWNHPGILQ 1049
            T  V+  KL+P Q   Y RF+      +D VS    K R++ + G   L +I NHP ++ 
Sbjct: 647  TEQVLFCKLTPEQNEEYVRFIH-----SDAVSQIMAKKRQALY-GIDILRKICNHPDLVN 700

Query: 1050 LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEH 1109
            + K KG P                                     G+   DW N      
Sbjct: 701  VRK-KGQP-------------------------------------GY---DWGNP----- 714

Query: 1110 TYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKK 1169
                   S K+  + ++L +    G K+L+FSQ+   LD+++ ++ K+           +
Sbjct: 715  -----RRSSKLQTVGELLPLWKRFGHKTLLFSQTKIMLDILQEFIGKM-----------E 758

Query: 1170 GKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
            G ++ R+DG     +RQ L++RFN   +  +   L++T+ G LG+NL  A R++I D  W
Sbjct: 759  GMNYLRMDGEVAVEKRQALIDRFNH--DPSIHVFLLTTKTGGLGVNLTGATRIVIYDPDW 816

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTI 1289
            NP+ DLQA  RAWR GQTKPV  YRLM  GT+EEKIY RQ+ K+ +  +V+   +     
Sbjct: 817  NPSTDLQARERAWRLGQTKPVAIYRLMTSGTIEEKIYHRQIFKQFMTNKVLKDPKQRANF 876

Query: 1290 SKEEMLHLFEFGDD 1303
               ++  LF FGD+
Sbjct: 877  DLSDLYDLFSFGDN 890


>gi|334326071|ref|XP_001379449.2| PREDICTED: DNA repair and recombination protein RAD54B [Monodelphis
            domestica]
          Length = 827

 Score =  257 bits (656), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 187/594 (31%), Positives = 302/594 (50%), Gaps = 81/594 (13%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ ++T +R    G
Sbjct: 213  LRPHQKEGIVFLYECVM-GMRM----NGRFGAILADEMGLGKTLQCISLIWTLLRQGLYG 267

Query: 784  ----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG 839
                ++  LIVTP +++ NW++EF KW  +E   ++VF L+   +     +   +     
Sbjct: 268  GKPIIKKTLIVTPGSLVTNWRKEFQKWLGTE--RIKVFTLDQAHKIEDFIISPLY----S 321

Query: 840  VFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQ 898
            V +I Y    R L   K++K                D+L+CDE H +KN+   TT AL  
Sbjct: 322  VLIISYEMLLRCLDQIKNIKF---------------DLLICDEGHRLKNSSIKTTTALVS 366

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            + C++R+ LTG+P+QN+L E+Y +++FV  G LGS   +R  ++ PI   +  ++T E+ 
Sbjct: 367  LSCEKRVILTGTPVQNDLQEFYALIEFVNPGILGSLSSYRKIYEEPIIISREPSATQEEK 426

Query: 959  KIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT 1018
            K+  +R+  L      F+ R    V+ K LPPK   VI  +   LQ  LY++ L      
Sbjct: 427  KLGEKRAAELTRLTGLFILRRTQEVINKYLPPKIESVIFCRPGILQIELYRKLLSSQAV- 485

Query: 1019 NDRVSNEKIRKS--FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM-DYNV 1075
              R   + I ++        AL ++ NHP +L       + S ++ E++SS E   +YN 
Sbjct: 486  --RFCLQGILENAPHLLCIGALKKLCNHPCLL-------FKSLKEKENNSSSEQYEEYN- 535

Query: 1076 VIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNM-- 1133
                       F +G  D   +  D+     + +T+ E D SGK+ +L  +L     +  
Sbjct: 536  -----------FSEGLIDA--YPADY-----NPNTFSETD-SGKLQVLTKLLAAIRELSP 576

Query: 1134 GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN 1193
             +K ++ S    TL+++            Q    + G    RLDG+T   +RQ++V+ FN
Sbjct: 577  SEKVVLVSNYTQTLNIL------------QAVCTRHGYTCTRLDGQTPVVQRQQIVDGFN 624

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
               +  V   L+S++AG +G+NL   + +I+ D  WNP  D+QA+ R WR GQ   V  Y
Sbjct: 625  CK-HSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMARVWRDGQKHSVHIY 683

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEFGDDEN 1305
            RL+  GT+EEKIY+RQ++K+GL+  VVD  +   H   S EE+ +LF   +D +
Sbjct: 684  RLLTTGTIEEKIYQRQISKQGLSGAVVDLAKTSEHIQFSVEELKNLFTLHEDSD 737


>gi|326429518|gb|EGD75088.1| Rad54b protein [Salpingoeca sp. ATCC 50818]
          Length = 1070

 Score =  257 bits (656), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 193/648 (29%), Positives = 308/648 (47%), Gaps = 84/648 (12%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +   L+ HQ VG+ F+W +++      K   +G GCIL   MGLGKT Q I  ++TA++ 
Sbjct: 311  LGVHLRPHQRVGVEFLWHSVVG-----KPHVEGQGCILGDEMGLGKTLQCITLIWTALKQ 365

Query: 780  VNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRA 836
             + G    R  ++V P +++ NW+QEF KW   E   ++VF++       +A+   +  A
Sbjct: 366  NHDGKPLARRVMVVCPGSLVRNWEQEFRKWLGRER--IKVFVV-------KADKPVREFA 416

Query: 837  KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQAL 896
               VF +   ++  L            R I    +   DI+VCDEAH +KNT A TT A+
Sbjct: 417  AASVFSVLLLSYEML-----------LRNIADVSKLNLDIVVCDEAHRLKNTSAKTTMAM 465

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
              ++ +RRIALTG+P+QN+L E++ +VDF   G LG+   FR  ++ PI   +   +T  
Sbjct: 466  MGLRARRRIALTGTPIQNDLQEFFAIVDFCNPGILGTQATFRRVYERPILESRQPTATPA 525

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK---RFLD 1013
            + K+ + R+  L   +  F  R    +    LPPK+ +V+  + S  Q +LY+   R   
Sbjct: 526  ERKLGDARATELTRMISSFCLRRTKEINLSYLPPKSDYVLFCRPSQTQLQLYRALLRSTA 585

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL--QLTKDKG-----YPSREDAEDSS 1066
            +      R+S      S      AL  + N P IL  +   D G      P  +    ++
Sbjct: 586  VKSCLQGRLSA----GSHLVIITALKTLCNSPTILCRKGQPDAGSGRSRTPRPKKKATAT 641

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK----------ELDY 1116
            +  +   +                 +DD   + D+  DL+ E   +          ++  
Sbjct: 642  TKSSSSSSSSGSGGGGGGGGDGNDDDDDDDNEDDFVRDLMVEELGRPALSTLDDVEDVSL 701

Query: 1117 SGKMVLLLDILT--MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
             GKM LL  +L         ++ L+ S S   L  ++    +   P            + 
Sbjct: 702  CGKMQLLSHMLQHWRAHPANERVLIVSNSTKVLSRVQALCEQCAYP------------FL 749

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVK---CTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
            RL G T + +R +LV RFN     RV+     L+S++AG +G+N+  A+R+I+ D  WNP
Sbjct: 750  RLQGNTPTHKRLELVNRFNS----RVRDDFVFLMSSKAGGVGLNIVGASRLILYDTDWNP 805

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT--- 1288
              DLQA+ R WR GQ + V+ YR +  GT+EEKIY+RQV K+GL+  VVD+Q   +T   
Sbjct: 806  ANDLQAMARVWRDGQKRHVYVYRFLTTGTIEEKIYQRQVHKQGLSGSVVDKQGSKKTAGT 865

Query: 1289 -----ISKEEMLHLFEFGDDENPDP---LTAVSKENGQGSSQNTNCAL 1328
                  S EE+  +F   +D   D    L   + E+G GS +  + +L
Sbjct: 866  KQVAGFSMEELKDIFSLREDTKSDTNDLLKKFAGEDGSGSGRQKSASL 913


>gi|346326947|gb|EGX96543.1| DNA repair and recombination protein RAD54 [Cordyceps militaris CM01]
          Length = 844

 Score =  257 bits (656), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 195/618 (31%), Positives = 298/618 (48%), Gaps = 93/618 (15%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + +    E  R+P  +  KL    + HQV G++FM+  +   I      +K  GCI+
Sbjct: 146  ILGIKKTVENEHPRVPVVLDPKLAGVLRPHQVEGVKFMYRCVAGLI-----DEKANGCIM 200

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q I  L+T ++ S + G   ++ A++V P +++ NW  E  KW   + + 
Sbjct: 201  ADEMGLGKTLQCITLLWTLLKQSPDAGKPTIQKAIVVCPASLVKNWANELTKWLGANAIN 260

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      E+++R  R   +A  R+    V ++ Y   R N+   KH K         
Sbjct: 261  PFAIDGKSSKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI-------- 312

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
                    +L CDE H +KN  ++T  AL  +   RR+ LTG+P+QN+L EY+ +  F  
Sbjct: 313  -------GLLFCDEGHRLKNGDSNTFNALNNLNVSRRVILTGTPIQNDLTEYFSLTSFAN 365

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS  +FR RF+ PI  G+  +++ +D +  +  +  L   +  F+ R   +++ K 
Sbjct: 366  PDLLGSRLDFRKRFEIPILRGRDADASEKDKERGDACTSELLAIVNKFLIRRTNDILSKY 425

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   L+P Q  LY  F+   D+      + S              L ++ NH
Sbjct: 426  LPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGKGSQP------LKAINMLKKLCNH 479

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L L +D   P  ED          DY   + ++ R  +  +          K W   
Sbjct: 480  PDLLNLGED--LPGSEDCFPK------DY---VPKEARGRDREI----------KPW--- 515

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM +L  +L  +  +  DK ++ S    TLDL E    KL R  + 
Sbjct: 516  -----------YSGKMQVLDRMLARIRRDTNDKIVLISNYTSTLDLFE----KLCRSRQY 560

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    ++RQKLV+RFN+P        L+S++AG  GINL  ANR+I
Sbjct: 561  GSL--------RLDGTMNVNKRQKLVDRFNDPEGDEF-VFLLSSKAGGCGINLIGANRLI 611

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  
Sbjct: 612  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSA 671

Query: 1283 QQVHRTISKEEMLHLFEF 1300
            + V R  S + +  LF++
Sbjct: 672  EDVQRHFSLDGLRELFQY 689


>gi|321465306|gb|EFX76308.1| RAD54, DNA repair and recombination protein [Daphnia pulex]
          Length = 748

 Score =  257 bits (656), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 184/597 (30%), Positives = 291/597 (48%), Gaps = 89/597 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            ++  L+ HQ  G++FM++ +          +   GCI+A  MGLGKT Q I  L+T ++ 
Sbjct: 149  LTKVLRPHQREGVKFMYDCVTGLCI-----ENNYGCIMADEMGLGKTLQCITLLWTLLKQ 203

Query: 780  ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW-- 834
                   +   +IV+P +++ NW+ E  KW    +  L   +++  S+D     L  +  
Sbjct: 204  GPDCKPLIAKGIIVSPSSLVKNWQNEINKWLSGRVNTL---VIDSGSKDEIDRNLNGFIH 260

Query: 835  ----RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTR 889
                R    V +I Y  FR  +               HAL  G   +++CDE H +KN+ 
Sbjct: 261  THGRRVVTPVLIISYETFRLHA---------------HALHKGEIGLVLCDEGHRLKNSE 305

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              T QAL  + C+RR+ L+G+P+QN+L+EY+ ++ FV +G LG++ EF+ RF+ PI  G+
Sbjct: 306  NQTYQALVALNCKRRVLLSGTPIQNDLLEYFSLLHFVNQGILGTAQEFKKRFETPILRGR 365

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
              ++T E  K    +   L + +   + R    ++ K LP K   V+ +KLSP+Q  +YK
Sbjct: 366  DADATEETQKKGQTQLKELADLVNKCIIRRTSALLTKYLPVKIELVVCIKLSPVQASIYK 425

Query: 1010 RFLDLHGFTND-RVSNEKIRKSFFAGYQA---LAQIWNHPGILQLTKDKGYPSREDAEDS 1065
            + +      +  R +NEK  KS      A   L ++ +HP   +L  +K     +  E +
Sbjct: 426  KVVASEAVKSKMREANEKPSKSSMTALAAITNLKKLCSHP---ELVYEKCQSGVDGFEGT 482

Query: 1066 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLD 1125
             S     ++      PR +                            + + SGK+ +L  
Sbjct: 483  LSLFPATFD------PRKL----------------------------QTELSGKLCVLDC 508

Query: 1126 ILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            IL M  S   DK ++ S    TLDL E    KL R         +     RLDG     +
Sbjct: 509  ILAMVKSTTNDKIVLISNYTQTLDLFE----KLCR--------MRSYPCVRLDGSMSIKK 556

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            R K+VE FN+P +      L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR 
Sbjct: 557  RAKIVEHFNDPASSDF-VFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 615

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLFEF 1300
            GQ KP F YRL++ GT+EEKI++RQ  K+ L++ VVD +  V R  S  ++  LF+ 
Sbjct: 616  GQKKPCFIYRLLSTGTIEEKIFQRQAHKKALSSCVVDNEDDVERHFSLSDLRDLFKL 672


>gi|213405783|ref|XP_002173663.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
            japonicus yFS275]
 gi|212001710|gb|EEB07370.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
            japonicus yFS275]
          Length = 853

 Score =  256 bits (655), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 191/610 (31%), Positives = 297/610 (48%), Gaps = 103/610 (16%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
            AV I   ++  L+ HQ+ G++F+++ +   I KV +G     CI+A  MGLGKT Q IA 
Sbjct: 261  AVVIDPRLARILRPHQIEGVKFLYKCVTGRIDKVANG-----CIMADEMGLGKTLQCIAL 315

Query: 773  LYTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS-RDRR 827
            L+T ++   LG    +  A+I  P +++ NW  E +KW   +   +  F+++  S +   
Sbjct: 316  LWTLLKQSPLGGKPTIEKAIITCPSSLVKNWANELVKWLGKD--AVTPFIVDGKSTKQEL 373

Query: 828  AELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 881
             E L +W    G      V ++ Y   R  S+ +++K   +             +L+CDE
Sbjct: 374  IEALLQWAHVRGRQITRPVLIVSYETLR--SYVEYLKGAEVG------------LLLCDE 419

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
             H +KN+ + T  AL  +  +RR+ L+G+P+QN+L EY+ +++F   G LGS  +FR  +
Sbjct: 420  GHRLKNSESLTFTALNSLDVRRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQDFRKNY 479

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
            + PI  G+  + + +D ++ + +   L   +  F+ R   +++ K LP K   V+   LS
Sbjct: 480  EIPILRGRDADGSEKDKELGDAKLAELSSIVNRFIIRRTNDILSKYLPVKYEHVVFCNLS 539

Query: 1002 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFF-AGYQALAQI------WNHPGILQLTKDK 1054
              Q  LY  F          +++ +IRK    AG Q L  I       NHP +L +T   
Sbjct: 540  EFQTALYSYF----------ITSPEIRKILRGAGSQPLKAIGILKKLCNHPDLLHIT--- 586

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                    ED    E +               F Q     GF  K+      H    + +
Sbjct: 587  --------EDFEGCEKL---------------FPQ-----GFVPKE------HRGRDRHV 612

Query: 1115 D--YSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
            D   SGKM++L  +L  +     DK ++ S    TLDL E                 +G 
Sbjct: 613  DSSLSGKMLVLERMLYRIKKETDDKIVLISNYTSTLDLFEQVCR------------TRGY 660

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
               RLDG    S+RQ+LV+ FN+P  K     L+S++AG  GINL  ANR+I+ D  WNP
Sbjct: 661  KALRLDGTMNVSKRQRLVDEFNDP-EKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNP 719

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTIS 1290
              D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  Q V R  S
Sbjct: 720  AADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERHFS 779

Query: 1291 KEEMLHLFEF 1300
             + +  LF++
Sbjct: 780  LDNLRQLFQY 789


>gi|118094595|ref|XP_422447.2| PREDICTED: DNA repair and recombination protein RAD54-like [Gallus
            gallus]
          Length = 804

 Score =  256 bits (655), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 180/593 (30%), Positives = 285/593 (48%), Gaps = 82/593 (13%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +S  L+ HQ  G++F+W+ +    R++       GCI+A  MGLGKT Q I  ++T +R 
Sbjct: 209  LSRVLRPHQREGVKFLWDCVTS--RRIPGSH---GCIMADEMGLGKTLQCITLMWTLLRQ 263

Query: 780  ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK--- 833
                   +  A++V+P +++ NW  E  KW    ++PL +        DR+         
Sbjct: 264  SPDCKPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGFMNQRG 323

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADT 892
             R    + +I Y  FR      H +          ALQ G   +++CDE H +KN+   T
Sbjct: 324  LRVPSPILIISYETFR-----LHAE----------ALQKGSVGLVICDEGHRLKNSENQT 368

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
             QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ EF+  F+ PI  G+  +
Sbjct: 369  YQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDAD 428

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ++  + +   +R   L   +   + R   +++ K LP K   V+  +L+PLQ  LYK FL
Sbjct: 429  ASEAERQKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFL 488

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
                   + +   KI  S  +   +L ++ NHP ++                        
Sbjct: 489  K-QAKPVEELKEGKINVSSLSSITSLKKLCNHPALI------------------------ 523

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC-S 1131
            Y+  + E             ++GF          +     E   SGKM++L  IL +  S
Sbjct: 524  YDKCVEE-------------EEGFMGALDLFPAGYSTKSVEPQLSGKMLVLDYILAVTKS 570

Query: 1132 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVE 1190
               DK ++ S    TLDL E             KL +  +  Y RLDG     +R K+VE
Sbjct: 571  TSNDKVVLVSNYTQTLDLFE-------------KLCRNRRYLYVRLDGTMSIKKRAKVVE 617

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
            RFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  
Sbjct: 618  RFNSPSSPEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTC 676

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGD 1302
            + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E+  LF   +
Sbjct: 677  YIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGELKELFSLNE 729


>gi|71755459|ref|XP_828644.1| SNF2 DNA repair protein [Trypanosoma brucei brucei strain 927/4
            GUTat10.1]
 gi|70834030|gb|EAN79532.1| SNF2 DNA repair protein, putative [Trypanosoma brucei brucei strain
            927/4 GUTat10.1]
          Length = 1068

 Score =  256 bits (655), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 188/599 (31%), Positives = 290/599 (48%), Gaps = 80/599 (13%)

Query: 724  LKAHQVVGIRFMWENIIQS-IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV-N 781
            L+AHQ+ GIRFMW  + +  + +V +    +GCILAHTMGLGKT QVI FL+  +  +  
Sbjct: 252  LRAHQLKGIRFMWSILAEGPVGQVPA----VGCILAHTMGLGKTCQVIIFLHLFLDMLRK 307

Query: 782  LG---------LRTALIVTPVNVLHNWKQEFMKW-----RPSELKPLRVFMLEDVSR-DR 826
            +G          R  LIV P +    W +EF  W     R   + PL V   ED +R  +
Sbjct: 308  MGGSWYKSKKKQRRILIVVPKSTRAVWIEEFNMWSKFFPRDKRIVPLSV---EDCTRVGQ 364

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
            R     +W+  GGV L GY    N++       + +     +      D+LVCDEAH +K
Sbjct: 365  RVRAFNEWKTNGGVLLAGYEMLLNVAKCIGTTSQEVWNPSSYV-----DLLVCDEAHRLK 419

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            +        L+     RR+ +TG+PLQN+L EY+ MVD     +  +   F   F +PIE
Sbjct: 420  SENLQIANVLRSFNPLRRLLITGTPLQNHLKEYWAMVDMAVWKYF-NKQRFSQFFVSPIE 478

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
                  ++ ++V +   ++  L  +L+ FVQ  D   ++K+LPP   +V+ + LS  Q +
Sbjct: 479  AAADQKASLDEVTVARMKTFALSRELRNFVQCADGTALRKELPPLHEYVVVLPLSQSQAK 538

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAE--- 1063
            LY  FL L   +  R       ++F     A+ +I  HP +L  T   G+ + E+ +   
Sbjct: 539  LYNEFLQLARHSGAR------HRAFLEIAIAINKICAHPQLLYAT---GFATGEEGQSEA 589

Query: 1064 -----DSSSDENM--------DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHT 1110
                 D   D+N           NV +  K R +     G                    
Sbjct: 590  LGLLSDGEGDDNFMTECPEAGQENVALRSKRRGLCQPPPG-------------------- 629

Query: 1111 YKELDYSG-KMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL-PRPGKQGKLWK 1168
            Y  +   G K+ + + I+      G++ L FS S   LD+ E  ++++  R  K G L  
Sbjct: 630  YVPMPEEGTKLYVSILIIKAAVLRGERCLFFSMSTKLLDIFEGIIAEMNDRWLKDGSL-S 688

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            +   + RLDGR    ER + +  F    +      L+ST+AG +G+ + SA RVII DGS
Sbjct: 689  RPIVFCRLDGRKTEWERSEALRSFAS--STGADLFLLSTKAGGIGLTITSATRVIIADGS 746

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            +NP  D QAI RA+RYGQT+PV+AYRL+ + T E +++++++ KE L   VV+   + R
Sbjct: 747  FNPADDTQAIGRAYRYGQTQPVYAYRLVCYQTFEHRMFQQKLAKEWLFRTVVEEASLKR 805


>gi|307203835|gb|EFN82771.1| DNA repair and recombination protein RAD54-like [Harpegnathos
            saltator]
          Length = 679

 Score =  256 bits (655), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 196/647 (30%), Positives = 313/647 (48%), Gaps = 97/647 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---V 780
            L+ HQ  G++FM+E +       K  +   GCI+A  MGLGKT Q I  L+T ++     
Sbjct: 86   LRPHQREGVKFMYECVTG-----KRIEDAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 140

Query: 781  NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG- 839
               +  A+IV P +++ NW  E  KW  + +  L +       +D   +L++  +   G 
Sbjct: 141  KPLIDKAIIVAPSSLVKNWYNEIYKWLNNRVSALAID--GGKKKDIDTKLISFMKTYNGR 198

Query: 840  ----VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQA 895
                + +I Y  FR      HV  +N              +++CDE H +KN+   T Q+
Sbjct: 199  CVYPILIISYETFR---LHAHVLHQNEV-----------GLVLCDEGHRLKNSENQTYQS 244

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            L  +K +RR+ L+G+P+QN+L+EY+ +V FV +G LG++ EFR +F+ PI  GQ   +T 
Sbjct: 245  LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKFETPILRGQDAEATD 304

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
            E+ K+  +R   L   +   + R    ++ K LP K   V+ +K+  LQ RLYK F+   
Sbjct: 305  EERKLAEERLSDLVSVVNKCLIRRTSALLSKYLPLKHELVVCIKMGELQTRLYKSFIHSD 364

Query: 1016 GFTNDRVSNEKIRK----SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
                    ++  +K    S  A    L ++ NHP    L  DK                 
Sbjct: 365  SIKKSMEDSDNSKKGGSLSALAAITLLKKLCNHP---DLIYDK----------------- 404

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLDIL-T 1128
                 I E+             DGF  ++    L   ++ KEL  D SGK+++L  +L +
Sbjct: 405  -----IKER------------SDGF--ENAARLLPANYSTKELLPDLSGKLMVLDCLLAS 445

Query: 1129 MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
            + +   DK ++ S    TLDL E    KL          K+G ++ RLDG     +R K+
Sbjct: 446  IKTTTNDKIVLVSNYTQTLDLFE----KLCH--------KRGYNYVRLDGTMTIKKRSKV 493

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            V+ FN   +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K
Sbjct: 494  VDNFNSESSSDF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 552

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLFEFGDDENPD 1307
            P F YR ++ GT+EEKI++RQ  K+ L++ VVD++  V R  ++ ++  LF+   +EN  
Sbjct: 553  PCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVDQEDDVARHFTQTDLRDLFKL--EEN-- 608

Query: 1308 PLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMESLLGKHHPR 1354
                VS  + +   +     ++ K P     C+  L E     H+PR
Sbjct: 609  ---TVSDTHAKFKCKRCINGIETKGPSEQSDCNSDLSE-WRHSHNPR 651


>gi|281209483|gb|EFA83651.1| SNF2-related domain-containing protein [Polysphondylium pallidum
            PN500]
          Length = 934

 Score =  256 bits (655), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 178/583 (30%), Positives = 287/583 (49%), Gaps = 84/583 (14%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            GE  V +   +  KL+ HQ VGI+FM++ ++  +   K G+   GCILA  MGLGKT Q 
Sbjct: 286  GEIPVVMDPMLGNKLRPHQRVGIQFMFDCLL-GLGGFKDGN---GCILADDMGLGKTIQA 341

Query: 770  IAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
            I+ ++T ++    G  T   A+IV P  ++ NW +E  KW    +K + +       R +
Sbjct: 342  ISIMWTLLKQGIRGEPTCQRAIIVAPTGLVGNWVKELKKWLGEGIKSIHIGKSTPTGRAK 401

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
             A+L         V +I Y   + +     +K             D   +++CDE H +K
Sbjct: 402  LAQLET---GDADVLVISYDQLK-IWINDLIK------------IDMIGLVICDEGHRLK 445

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            N    +TQA+  +  +RR+ L+G+P+QNNLME+Y MV+FV  G L S   F N +  PI 
Sbjct: 446  NAETKSTQAVNMLPTKRRVILSGTPIQNNLMEFYAMVNFVNPGVLKSVPMFNNVYNGPIL 505

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
              +  ++T E+ ++  +RS +L E    F+ R    +  + LP KT + +  KLSPLQ+ 
Sbjct: 506  ASRSPDATPEEKRVGRERSLMLTEITGKFILRRTAAINTQYLPKKTEYTVFCKLSPLQKT 565

Query: 1007 LYKRFLDL---HGFTNDRVSNEKIRKSFFAG----YQALAQIWNHPGILQLTKDKGYPSR 1059
            +Y + L++    G+              F G      +L ++ N P ++        PS 
Sbjct: 566  IYLKLLEIIKGRGYQT------------FTGALPLITSLKKLSNCPELVYTP-----PSA 608

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
            ++ +          +V+ G  P+  N                           +  YSGK
Sbjct: 609  KEDDKEEEKAEDVSSVIHGLFPKEFN-----------------------TKVSQPQYSGK 645

Query: 1120 MVLLLDILTMCSN-MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
            +  +  ++    N   D+ +V S    TL +    L++L          ++G  +++LDG
Sbjct: 646  LQFIDTLMQQIRNKTKDRVVVISNYTQTLSV----LARLCN--------ERGYPFFQLDG 693

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
             T S +RQ LV++FN+P + +    L+S++AG +G+NL  AN +I+VD  WNP  D QA+
Sbjct: 694  STPSDKRQVLVDKFNDPSSPQF-VFLLSSKAGGIGLNLIGANHLILVDPDWNPANDAQAM 752

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
             R WR GQ K V  YR ++ GT+EEKIY+RQ+TK  L+  VV+
Sbjct: 753  ARVWREGQKKVVSIYRTLSTGTIEEKIYQRQITKMALSVSVVE 795


>gi|194760847|ref|XP_001962644.1| GF14336 [Drosophila ananassae]
 gi|292630861|sp|B3MMA5.1|RAD54_DROAN RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=Protein okra
 gi|190616341|gb|EDV31865.1| GF14336 [Drosophila ananassae]
          Length = 791

 Score =  256 bits (655), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 186/597 (31%), Positives = 299/597 (50%), Gaps = 94/597 (15%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +S  L+ HQ  G+RFM+E +     + K GD   GCI+A  MGLGKT Q +  ++T +R 
Sbjct: 155  LSNILRPHQREGVRFMYECV-----EGKKGDFN-GCIMADEMGLGKTLQCVTLVWTLLRQ 208

Query: 780  ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRA 836
                   +  A++V+P +++ NW++EF KW    L  L +      +  R  E  +   +
Sbjct: 209  GPESKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLAMEGGTKENTIRVLEQFSMTSS 268

Query: 837  KGG--VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
            K G  V LI Y  FR            +  EI    + G  +++CDE H +KN+   T Q
Sbjct: 269  KLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLTYQ 314

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            AL  +K +RR+ L+G+P+QN+L EY+ +V+FV    LG++ +F+  F+N I  GQ+ +ST
Sbjct: 315  ALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSILRGQNADST 374

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
              + K   +++  L   +   + R    ++ K LP K   VI VKL+ +Q +LY  FL+ 
Sbjct: 375  EGERKKAIEKTQELIGLVDQCIIRRTNQILTKYLPIKFEMVICVKLTAIQLQLYTNFLN- 433

Query: 1015 HGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQL---TKDKGYPSREDAEDS 1065
                +D+V       NEK   +  A    L +I +HP ++      K+KG+ + ++   S
Sbjct: 434  ----SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIHQKIEAKEKGFENSQNVLPS 489

Query: 1066 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLD 1125
            +             KP+ +                              ++SGK +LL  
Sbjct: 490  NY------------KPKEICP----------------------------EWSGKFMLLDF 509

Query: 1126 ILTMCSNMG-DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            +L      G DK ++ S    TLDL E    +L R  K G        + RLDG     +
Sbjct: 510  MLAAIRAAGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMSIKK 557

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            R K+V++FN+P +      ++S++AG  G+NL  ANR+ + D  WNP  D QA+ R WR 
Sbjct: 558  RSKVVDKFNDP-DSECFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRD 616

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1300
            GQ KP + YRL+A GT+EEKI +RQ  K+ L++ ++D  +   +  +++++  LF F
Sbjct: 617  GQKKPCYIYRLVASGTIEEKILQRQTHKKSLSSTIIDNNESSEKHFTRDDLKDLFSF 673


>gi|401408081|ref|XP_003883489.1| hypothetical protein NCLIV_032440 [Neospora caninum Liverpool]
 gi|325117906|emb|CBZ53457.1| hypothetical protein NCLIV_032440 [Neospora caninum Liverpool]
          Length = 713

 Score =  256 bits (654), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 178/601 (29%), Positives = 292/601 (48%), Gaps = 87/601 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR----S 779
            L+ HQ  G++FM++ ++  ++  +    G GCILA  MGLGKT Q I  L+T +      
Sbjct: 6    LREHQRQGVKFMFDCLM-GLKDFQ----GEGCILADDMGLGKTLQSITILWTLLEQNIEG 60

Query: 780  VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLA--KWRAK 837
                +R A++V P ++++NW  E  KW         V    D  +D+        K+  +
Sbjct: 61   TQPAVRRAVVVCPASLVNNWAAEIQKWLQGRCGCTPV---ADNCKDKVVSKFEGFKYDRQ 117

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADTTQAL 896
              + +  Y  FR      HV          H L+  P D++VCDEAH +KN +  T+ A+
Sbjct: 118  SRILIASYETFR-----VHV----------HRLEGVPIDMVVCDEAHRLKNDKTKTSLAI 162

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
             ++  ++R+ L+G+P+QN+L E++ +V       +G +H FR R+ NPI  G+  ++T +
Sbjct: 163  IELPAKKRLLLSGTPIQNDLDEFFALVSLCNPNVVGDAHTFRKRYANPILIGREPDATED 222

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
              ++   R   L      F+ R   +++ K LPPK V  +  +L+PLQ+  Y+ FL    
Sbjct: 223  QQQLAAARLTELSSLTNMFILRRTNSLLAKVLPPKVVLNVFCRLTPLQKEFYRSFLSSKS 282

Query: 1017 FTNDRVSNEKIRKSFFAG-----YQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
                  + E   KS F G      Q L ++ NHP +++ ++ +     E  E   S+ ++
Sbjct: 283  -CRKIFAAEAEGKSGFTGRVLSSIQGLMKLCNHPSLVK-SQAQMLQGFEKCEKYFSELDL 340

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK---MVLLLDILT 1128
            +     G+K R+                               + SGK   +  LLD++ 
Sbjct: 341  E-----GQKARS--------------------------RLVRPEISGKLLLLARLLDVIR 369

Query: 1129 MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
              +N  DK ++ S    TLDL +        P              RLDG+T   +R  +
Sbjct: 370  TTTN--DKIVLISNYTQTLDLFDRMCRDCGYP------------VMRLDGQTSIKKRHAM 415

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            + +FN+P+N +    L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K
Sbjct: 416  ITKFNDPMNPQSFVFLLSSKAGGCGVNLIGANRLVLFDPDWNPANDKQALARVWRDGQKK 475

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLFEFGDDENP 1306
            P + YR  + GT+EEKIY+RQ+ K+GL+A +V     Q+  ++S E +  LF   +D   
Sbjct: 476  PCYIYRFFSTGTIEEKIYQRQICKDGLSAMLVSDGENQIKDSLSTELVKDLFRLREDTVS 535

Query: 1307 D 1307
            D
Sbjct: 536  D 536


>gi|167527295|ref|XP_001747980.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773729|gb|EDQ87367.1| predicted protein [Monosiga brevicollis MX1]
          Length = 760

 Score =  256 bits (654), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 189/618 (30%), Positives = 301/618 (48%), Gaps = 87/618 (14%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            +R K   AV +   + AKL+ HQ+ G++F+++ +  +  K+       G I+A  MGLGK
Sbjct: 137  IRNKHPVAVVVDPILGAKLRPHQIEGVQFLYDCV--TGLKIPGYH---GAIMADGMGLGK 191

Query: 766  TFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKW---RPSELKPLRVFML 819
            T Q +   +T ++        L  A+IV P +++ NW  EF KW   R S L P+     
Sbjct: 192  TLQNVTLTWTLLKQSPECRPTLTKAVIVCPSSLVKNWSNEFRKWLGDRVSTL-PIDNGAS 250

Query: 820  EDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
            +++ +  R    A  RA   V +I Y   R      H+          HAL     I++C
Sbjct: 251  DEIDKKLRYFGSASGRAAPQVLIISYETLRG-----HI----------HALDQPVGIVIC 295

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN+   T +AL  +K +RR+ L+G+P+QN L+EYY +++FV  G LGS+ EFR 
Sbjct: 296  DEGHRLKNSENQTYRALMALKTERRVILSGTPVQNELLEYYALLEFVNPGLLGSAGEFRK 355

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
            +F+ PI  G+  ++T+++ ++   + + + E +   + R   +++ K LPPK   V+  +
Sbjct: 356  KFEIPILRGRDADATAQEQELGQTKLNEMVELVNRCLIRRTSDILSKYLPPKIEAVVCCR 415

Query: 1000 LSPLQRRLYKRFLDLHGFT--NDRVSNEKIRKSFFAGYQALA------QIWNHPGILQLT 1051
            L+ LQ  +YKR +D       +D       +KS  +G   LA      ++ NHP   +L 
Sbjct: 416  LTGLQLDMYKRLIDSQAIALEDDGPGKTNQKKSGGSGPTPLAFITHLKKLCNHP---ELI 472

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
             DK   +RE                       + D +  K D      +W          
Sbjct: 473  MDK-IQAREPGF------------------AKLQDLVPAKWDSRVVSPEW---------- 503

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVF-SQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
                 SGK++++  +L M  +  D+ +V  S    TLDL E    +L R        ++ 
Sbjct: 504  -----SGKVMVVDAMLAMLKSTTDEKVVLISNYTQTLDLFE----RLCR--------QRR 546

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
              + RLDG     +RQK+V+ FN P +      ++S++AG  GINL  A+R+I+ D  WN
Sbjct: 547  YKYVRLDGTMSIKKRQKVVDHFNAPDSDDF-IFMLSSKAGGCGINLIGASRLILTDPDWN 605

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTI 1289
            P  D QA+ R WR GQ +  + YRL+A GT+EEKI  RQ  K  L+  V+D  + V R  
Sbjct: 606  PASDAQALARCWRDGQRRITYVYRLVATGTIEEKILARQAHKTALSDCVIDEAEDVQRHF 665

Query: 1290 SKEEMLHLFEFGDDENPD 1307
            S  ++  LF   +    D
Sbjct: 666  SLADLRRLFTLNEGTTSD 683


>gi|405964762|gb|EKC30211.1| UPF0505 protein C16orf62-like protein [Crassostrea gigas]
          Length = 1826

 Score =  256 bits (654), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 182/592 (30%), Positives = 290/592 (48%), Gaps = 77/592 (13%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +S  L+ HQ  G+ F++E ++   R +     G G ILA  MGLGKT Q I+ ++T  + 
Sbjct: 238  LSVHLRPHQREGVTFLYECVM-GFRNLS----GRGAILADDMGLGKTLQCISLIWTLYKQ 292

Query: 780  VNLG----LRTALIVTP---VNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLA 832
               G    ++ ALI+TP   V    NW  E  KW  +E   L+ F    VS D R E   
Sbjct: 293  GPYGGKPVIKRALIITPGSLVKASTNWFLEIKKWLGTER--LKAFA---VSSDNRIEEFV 347

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
               +   + +I Y  F  +             E   +LQ   DI++CDE H +KN    T
Sbjct: 348  N-TSIYPIVIISYEMFVRV------------YEQLQSLQF--DIIICDEGHRLKNNNIKT 392

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
            T  +  +   RR+ LTG+P+QN+L E++ +V+F   G LGSS  F+  F+NPI   +  +
Sbjct: 393  TSLIASMPTPRRVVLTGTPIQNDLQEFFSIVEFCNPGLLGSSGSFKRVFENPIVASRQPS 452

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ++ ED+++  +R   L    K FV R    +  K LPPK   V+  K S LQ  LY + L
Sbjct: 453  ASPEDIELGAERGSELSRITKLFVLRRSQEINIKYLPPKCEVVLFCKPSALQLSLYSQML 512

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
                F +   S+     +      AL ++ NHP ++     +     +D E+ S    + 
Sbjct: 513  QGKLFRSCLRSDG---ATHLVCIGALKKLCNHPSLIFTKASQAEECPDDIEEGSVYSGL- 568

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 1132
                                    F  D+      E  Y   +++GK+ +L +IL     
Sbjct: 569  ---------------------SSLFPPDY-----QEKIYSA-EHAGKLKVLSEILIQIHK 601

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
              +K ++ S    TLD+++ + S              G  + RLDG+T ++ RQ++V +F
Sbjct: 602  DSEKIVIVSNHTKTLDILQQFCSNC------------GYGYLRLDGQTSTNIRQEIVTKF 649

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N   +   K  L+S++AG +G+NL  A+R+++ D  WNP  DLQA+ R WR GQ + ++ 
Sbjct: 650  NSK-HCLEKVFLLSSKAGGVGLNLIGASRLLLYDIDWNPANDLQAMARVWRDGQKRKIYI 708

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEFGDD 1303
            YRL+  GT+EEKIY+RQ++K+GL+  V+D + +     S+EE+  LF   ++
Sbjct: 709  YRLLTTGTIEEKIYQRQISKQGLSGAVMDLKNKREAQFSREELRDLFSLNEN 760


>gi|348526954|ref|XP_003450984.1| PREDICTED: DNA repair and recombination protein RAD54B-like
            [Oreochromis niloticus]
          Length = 1210

 Score =  256 bits (654), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 179/595 (30%), Positives = 289/595 (48%), Gaps = 90/595 (15%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC---ILAHTMGLGKTFQVIAFLYTA 776
            ++  L+ HQ  G+ F++E ++        G +  GC   ILA  MGLGKT Q +A  +T 
Sbjct: 603  LTTHLRPHQRDGLLFLYECVM--------GMRAAGCYGAILADEMGLGKTLQSVALSWTL 654

Query: 777  MRSVNLGLRT----ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLA 832
            ++    G R      L+VTP +++ NW  EF KW   E   + VF    V +D R E   
Sbjct: 655  LKQGPYGGRPVAKRVLVVTPGSLVQNWAAEFNKWLGRER--ISVFT---VDQDHRIEQFV 709

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
                   V +I Y     L   + V+  +              +++CDE H +KN+   T
Sbjct: 710  -LSPLHSVLVISYEML--LRCLEQVQKVDFG------------LIICDEGHRLKNSNIKT 754

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
            + AL  ++C RR+ LTG+P+QN+L E+Y +++FV  G LGSS  +R  ++ PI   +  +
Sbjct: 755  SSALSSLECNRRVILTGTPVQNDLQEFYAIIEFVNSGILGSSTAYRKVYEEPILRSRQPS 814

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
             T E+  +  +R+  L      F+ R    ++ + LPP+  + +  + S LQR LYK  L
Sbjct: 815  CTEEERVLGEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCEPSSLQRELYKHLL 874

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
              H      +       +  A   AL ++ NHPG+L +T  +         D+ S E+  
Sbjct: 875  -CHRVFRACLQGSTQTHTHLACITALKKLCNHPGLLHITVKR--------TDAGSVESSL 925

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 1132
            Y  +        + F +  +  GF   D                SGK+++L D+L     
Sbjct: 926  YEGL-------ADLFPESYSSGGFTIAD----------------SGKLLVLSDLLAAIRQ 962

Query: 1133 MGDKSLV-----FSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
            +     V     ++Q   TLDL++     +            G  + RLDG T +++RQ+
Sbjct: 963  LSSSDRVVVVSNYTQ---TLDLLQDLCVHM------------GYTFCRLDGNTPTNQRQR 1007

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            LV+ FN P ++     L+S++AG +G+NL  A+ +++ D  WNP  D+QA+ R WR GQ 
Sbjct: 1008 LVDSFNSPYSQNF-LFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRDGQK 1066

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLFEF 1300
            K V  YRL+  GT+EE+I++RQV+K+GL+  VVD  +   H + S  ++  LF  
Sbjct: 1067 KTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDMGKGAEHTSFSTSDLRDLFSL 1121


>gi|297684878|ref|XP_002820041.1| PREDICTED: uncharacterized protein LOC100434553 [Pongo abelii]
          Length = 1549

 Score =  256 bits (654), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 190/634 (29%), Positives = 285/634 (44%), Gaps = 120/634 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G RF++E+ I           G GCIL   MGLGKT QVI+FL  
Sbjct: 115  IPYTINRYLRNYQREGTRFLYEHYIH----------GGGCILGDDMGLGKTVQVISFLAA 164

Query: 776  AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                  RS+      +   +  LIV P++VL+NWK E   W     
Sbjct: 165  VLHKKGTREDIENNMPEFLLRSMKKEPLCSTAKKMFLIVAPLSVLYNWKDELDTW----- 219

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  + L  Y   R            +  +  ++LQ
Sbjct: 220  GYFRVTVLHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLQ 265

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 266  WS--AVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 323

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS   F+ +F +P+E+GQ   +T  ++    +    L +++ G+  R    ++K  LP K
Sbjct: 324  GSRTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKK 383

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 384  EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKT 443

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
             + +    L +I NH  +LQ            A  +S  +      +  +      DF+Q
Sbjct: 444  LYLSYLTVLQKIANHVALLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 491

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD+
Sbjct: 492  KSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 539

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            ++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST A
Sbjct: 540  LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTMA 585

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQ
Sbjct: 586  GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 645

Query: 1270 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            + K+ L   VV  +   R       SKE    LF
Sbjct: 646  IYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 679


>gi|340502773|gb|EGR29425.1| snf2 family n-terminal domain protein [Ichthyophthirius multifiliis]
          Length = 632

 Score =  256 bits (653), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 185/585 (31%), Positives = 284/585 (48%), Gaps = 94/585 (16%)

Query: 747  KSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-----SVNLGLRTALIVTPVNVLHNWKQ 801
            K G +  GCILA +MGLGKT Q IA ++  +R     S    L   +IVTPV++L  WK+
Sbjct: 8    KRGTEISGCILADSMGLGKTLQTIALIWVLLRRNPFSSCKPFLNKVIIVTPVSLLGVWKK 67

Query: 802  EFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG----VFLIGYTAFRNLSFGKHV 857
            E  KW   E       ++  ++  +R +++   +   G    V LI Y  FR      HV
Sbjct: 68   EIRKWLGDER------LIPKIAIGKREDVITTCKEFAGSYQKVLLISYDQFRT-----HV 116

Query: 858  KDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLM 917
            K  N   +IC       D+L+ DE H +KN    T +    ++C+RRI LTG+PLQN+L 
Sbjct: 117  KIFN---KIC-------DLLIFDEGHKLKNMNIKTFKQFDLIQCKRRIILTGTPLQNSLN 166

Query: 918  EYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQ 977
            E Y  + FV      +  +F++ F +PI     T+++ E +K    RS  L   ++ FV 
Sbjct: 167  ELYSCIKFVNPFIFENDKQFKSLFSDPIIASIKTDASEEIIKQAKMRSKELSNIIQKFVL 226

Query: 978  RMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA 1037
            R   ++++K LPPK  F I +K++ LQ+ LY +    + F  ++ +             +
Sbjct: 227  RRKADILEKLLPPKYEFYIFLKMTELQKMLYSKVQQNYDFNENQTA-------VLTLLTS 279

Query: 1038 LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
            + +I NHP IL            D E+ +S E   Y       P +            F 
Sbjct: 280  IRKILNHPQIL----------YTDQENKNSFEFKQYF------PHD------------FQ 311

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS------NMGDKSLVFSQSIPTLDLIE 1151
              DW N             S K   L DIL          N  +K ++ S    TLDLI+
Sbjct: 312  LNDWAN-------------SVKTQFLKDILYQIKDQQKLKNQKEKIIIVSYYTQTLDLIQ 358

Query: 1152 FYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGS 1211
              +++     +  K+        RLDG  +S++RQKL+++F +  N      L+  +AG 
Sbjct: 359  QLINQ--HESEHFKIL-------RLDGSVQSTQRQKLIDQFQDQ-NSNYNIFLLCAKAGG 408

Query: 1212 LGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVT 1271
             G+NL +ANR+I+++  WNP+ DLQ + R WR GQTK V+ YRL   GTMEEKI +RQ  
Sbjct: 409  TGLNLTAANRMILMEVDWNPSNDLQVMGRIWRDGQTKNVYIYRLFCTGTMEEKILQRQFL 468

Query: 1272 KEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKEN 1316
            KE L++ V+D +Q+ +   ++ +  LF++        LT   +EN
Sbjct: 469  KEDLSSNVIDEKQIIQQHDQDNLKMLFQYDKKYQGKCLTFQEEEN 513


>gi|343470034|emb|CCD17141.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 821

 Score =  256 bits (653), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 189/601 (31%), Positives = 294/601 (48%), Gaps = 51/601 (8%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQS-IRKVKSGDKGLGCILAHTMGLG 764
            VREK E       +   KL+AHQ+ GIRFMW  + +  + KV +    +GCILAHTMGLG
Sbjct: 37   VREKIEGLSPTQKTDRLKLRAHQMKGIRFMWSILAEGPVGKVPA----VGCILAHTMGLG 92

Query: 765  KTFQVIAFLYTAMRSVNLG----------LRT-ALIVTPVNVLHNWKQEFMKWR----PS 809
            KT Q I FL+  M+ + L           LR   LI  P +   +W  +F  W     PS
Sbjct: 93   KTCQAIIFLHLFMQEIGLSNDGCVKQMKRLRKRVLIAVPKSTRCSWVDQFEMWSNFFPPS 152

Query: 810  ELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA 869
            +   L + + E  S + R +L   W   GGV L GY     +   K  K+++  +     
Sbjct: 153  QRIEL-LCLTETSSAESRVKLFKSWITHGGVLLTGYEMLTKVY--KVYKEKSDNK---FT 206

Query: 870  LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
              +  D+L+CDEAH +K         LK +   RR+ +TG+PLQN L EY+ MVDF    
Sbjct: 207  TSEYIDLLICDEAHRLKCENLQVALTLKNLNPLRRLLITGTPLQNYLKEYWVMVDFALSK 266

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP 989
            +  +  +F + F NPIE+  +  +T ++V +   ++  L ++LK FVQ  D +++K++LP
Sbjct: 267  YF-NKDQFHHYFTNPIESSANWRATQDEVTVARTKTAALIQELKNFVQCYDSSILKQELP 325

Query: 990  PKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGIL 1048
            P   +V+ V+L+ +Q  L+  F         R++   I  S F      L +I  HP +L
Sbjct: 326  PLQEYVVFVQLTQMQAELHDEF--------TRLARRCISASNFLQTIACLRKICTHPQML 377

Query: 1049 QLTK-DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
              T  + G   +E   + SS  + D             D L    D+G+      N    
Sbjct: 378  FSTVFNTGSRGKESQRNESSSGDGDLAAAF----ERYEDVLTA--DEGY-----RNLCQP 426

Query: 1108 EHTYKELDYSG-KMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1166
               Y      G K+ + L I+      G+++L+F+     LD +E  +  +     +   
Sbjct: 427  PPGYIPTPQDGSKVYVALLIVKEAMKRGERTLLFTMYNKLLDFLEVAIKHMNDVWLEDGS 486

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
                  + RLDG    ++R   ++ F       V   L+S RAG +G+ + +A RVII+D
Sbjct: 487  ITTPIRFCRLDGTRTEADRSYALKTFASCDGPNV--FLVSMRAGGVGLTITAATRVIIMD 544

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 1286
            G +NP  + QAI RA+RYGQT+PVFAY L+ HGT E ++++ ++ KE L   +V+   + 
Sbjct: 545  GGFNPAEEKQAIGRAYRYGQTQPVFAYHLICHGTFEHRVFEHKLAKEWLFRTIVEEASLK 604

Query: 1287 R 1287
            R
Sbjct: 605  R 605


>gi|281206497|gb|EFA80683.1| SNF2-related domain-containing protein [Polysphondylium pallidum
            PN500]
          Length = 1959

 Score =  256 bits (653), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 171/590 (28%), Positives = 275/590 (46%), Gaps = 110/590 (18%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  + I S I   LK +Q+ G+RF+W+NI+          K  GCILAH+MGLGK+ Q +
Sbjct: 1370 EHDILINSDIGVFLKPYQMDGVRFLWDNIVV---------KEKGCILAHSMGLGKSIQTV 1420

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
            +F++T     +      L++ P N L+NW  EF KW P                      
Sbjct: 1421 SFIFT--HHTHFPNTKYLLIVPANTLYNWMNEFHKWLP---------------------- 1456

Query: 831  LAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRA 890
                              ++  F KH+   N +  I   +        C+++H+  N+  
Sbjct: 1457 ------------------KDSGFRKHLYFDNTSANISRVVS----TWWCNDSHLSDNS-- 1492

Query: 891  DTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH 950
                                     L EYY M+D++R   LG+  EF++RF  PIE G  
Sbjct: 1493 -------------------------LKEYYTMIDYIRPLHLGTVKEFQDRFIKPIEYGNR 1527

Query: 951  TNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKR 1010
             ++  +  ++M  R + L   +  FVQR+   V+ KDLP K   +I++K + +Q  L + 
Sbjct: 1528 ADADKKAFELMRGRLYALQNLISDFVQRLGPEVLAKDLPNKVETIISLKGTQIQYNLLQT 1587

Query: 1011 FLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
                           +++K      +    I NHP  L   K            S   + 
Sbjct: 1588 L-------------RRLKKKIIEEQEICTLICNHPDTLLEKKPINVEKVNKMAISDMKKL 1634

Query: 1071 MDYNVVIG----EKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE--LDYSGKMVLLL 1124
            +D N +      EK   +N  ++        +   +   L ++ Y++  ++ S KM +  
Sbjct: 1635 LDENFLPWRDCLEKQDLVNRIIEMNERIVLAENSMFPLELEKYHYRKGIVENSTKMSVFF 1694

Query: 1125 DILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
             +L     + ++++ FS S+ TL+L+E++L        Q K WK G+D+YRLDG     E
Sbjct: 1695 FMLEEFERLKERTVAFSSSLVTLNLMEYFL--------QKKGWKPGRDYYRLDGAVRPQE 1746

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            RQ L+ +FN+  N + K  +IST+AGSLG NL +  RVI++D  WNP ++ QA+YR +R 
Sbjct: 1747 RQNLINKFNDTGN-QCKLFIISTKAGSLGTNLTAGTRVILMDLLWNPVHERQAVYRCFRI 1805

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            GQTKPV+ Y L+  G++EE IY R V K+ LA R +D++   R   K+++
Sbjct: 1806 GQTKPVYVYTLIIAGSLEENIYNRLVFKQSLAKRAIDQETPIRHQIKDQL 1855


>gi|351698695|gb|EHB01614.1| DNA repair and recombination protein RAD54-like protein
            [Heterocephalus glaber]
          Length = 811

 Score =  256 bits (653), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 188/607 (30%), Positives = 296/607 (48%), Gaps = 92/607 (15%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGLGKT
Sbjct: 200  KEKLLVHVVVDPVLSKVLRPHQREGVKFLWECVTS--RRIPGS---YGCIMADEMGLGKT 254

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q IA ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 255  LQCIALMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 311

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 312  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 356

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ E
Sbjct: 357  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQE 416

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI   +   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 417  FKKHFELPILKSRDAAASEADRQLGEERLQELISIVNRCLIRRTSDILSKYLPVKIEQVV 476

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++    DK  
Sbjct: 477  CCRLTPLQTELYKRFLR-QAKPAEELREGKMSVSSLSSITSLKKLCNHPALIH---DKCV 532

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
               +  E +                  ++ F  G +                    E   
Sbjct: 533  EEEDGFEGA------------------LDIFPPGYSSKAI----------------EPQL 558

Query: 1117 SGKMVLLLDILTM---CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
            SGKM++L  IL +   CS+  DK ++ S    TLDL E             KL +  +  
Sbjct: 559  SGKMLVLDYILAVTRSCSS--DKVVLVSNYTQTLDLFE-------------KLCRARRYL 603

Query: 1174 Y-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            Y RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP 
Sbjct: 604  YVRLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 662

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISK 1291
             D QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S 
Sbjct: 663  NDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSL 722

Query: 1292 EEMLHLF 1298
             E+  LF
Sbjct: 723  GELKELF 729


>gi|410975581|ref|XP_003994209.1| PREDICTED: DNA excision repair protein ERCC-6 [Felis catus]
          Length = 1485

 Score =  256 bits (653), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 180/590 (30%), Positives = 276/590 (46%), Gaps = 106/590 (17%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL----YTAMRS 779
            L  +Q  G+R++WE   Q            G IL   MGLGKT Q+IAFL    Y+ +R+
Sbjct: 499  LSMYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQIIAFLAGLSYSKIRT 548

Query: 780  VNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR--DRRAELLA 832
                    GL   +IV P  V+H W +EF  W P    P RV +L +      ++ +L+ 
Sbjct: 549  RGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWP----PFRVAILHETGSYTHKKEKLIR 604

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
                  G+ +  Y+  R       +   +++R   H        ++ DE H I+N  A  
Sbjct: 605  DIAHCHGILITSYSYIR-------LMQDDISRHDWH-------YVILDEGHKIRNPNAAV 650

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
            T A KQ +   RI L+GSP+QNNL E + + DF+  G LG+   F  +F  PI  G ++N
Sbjct: 651  TLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSN 710

Query: 953  STSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVITVKLSPLQRRLYKR 1010
            ++   VK   + + +L + +  + ++RM  +V +   LP K   V+  +L+  Q ++Y+ 
Sbjct: 711  ASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQLKVYQN 770

Query: 1011 FLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD--KGYPSREDAEDSSSD 1068
            F+D       R+ N  ++   F+G  AL +I NHP +        +G P  E  ED    
Sbjct: 771  FIDSKEVY--RILNGDMQ--IFSGLVALRKICNHPDLFSGGPKNLRGIPDEELEED---- 822

Query: 1069 ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT 1128
                                         Q  +W              SGKM+++  +L 
Sbjct: 823  -----------------------------QFGYWK------------RSGKMIVVESLLK 841

Query: 1129 MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
            +    G + L+FSQS   LD++E +L              +   + ++DG T  + RQ L
Sbjct: 842  IWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYSYLKMDGTTAIASRQPL 889

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            + R+NE  +  +   L++TR G +G+NL  ANRVII D  WNP+ D QA  RAWR GQ K
Sbjct: 890  ITRYNE--DTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKK 947

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLF 1298
             V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  LF
Sbjct: 948  QVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELF 997


>gi|221488620|gb|EEE26834.1| DNA repair and recombination protein RAD54, putative [Toxoplasma
            gondii GT1]
          Length = 872

 Score =  256 bits (653), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 175/614 (28%), Positives = 298/614 (48%), Gaps = 95/614 (15%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+ V +   ++  L+ HQ  G++FM++ ++  +++ +    G GCILA  MGLGKT Q I
Sbjct: 149  EKKVEVDPMLTRWLREHQRQGVKFMFDCLM-GLKEFQ----GEGCILADDMGLGKTLQSI 203

Query: 771  AFLYTAMR----SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
              L+T +          +R A++V P ++++NW  E  KW               V+ + 
Sbjct: 204  TILWTLLEQNIEGTQPAVRRAVVVCPASLVNNWAAEIQKWLQGRCG------CTPVADNC 257

Query: 827  RAELLAKWRA-----KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCD 880
            + ++++K+       +  + +  Y  FR      HV          H L+  P D++VCD
Sbjct: 258  KEKVVSKFEGFKYDRQSRILIASYETFR-----MHV----------HRLEGVPIDMVVCD 302

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            EAH +KN +  T+ A+ ++  ++R+ L+G+P+QN+L E++ +V       +G +H FR R
Sbjct: 303  EAHRLKNDKTKTSLAIIELPAKKRLLLSGTPIQNDLDEFFALVSLCNPNVVGDAHTFRRR 362

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKL 1000
            + NPI  G+  ++T +  ++  +R   L      F+ R   +++ K LPPK V  +  +L
Sbjct: 363  YANPILVGREPDATEDQQQLAAERLTELSSLTNLFILRRTNSLLAKVLPPKVVLNVFCRL 422

Query: 1001 SPLQRRLYKRFLDLHG----FTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL--QLTKDK 1054
            +PLQ+  Y+ FL        FT +            +  Q L ++ NHP ++  Q    +
Sbjct: 423  TPLQKEFYRSFLSSKSCRKMFTAEAEGKGGFTGRVLSSIQGLMKLCNHPSLVKSQAQMLQ 482

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
            G+   E  E   S+ +++     G+K R+                               
Sbjct: 483  GF---EKCEKYFSELDLE-----GQKARS--------------------------RMVRT 508

Query: 1115 DYSGK---MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
            + SGK   +  LLD++   +N  DK ++ S    TLDL +                  G 
Sbjct: 509  EISGKLLLLARLLDVIRTTTN--DKIVLISNYTQTLDLFDRMCRDC------------GY 554

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
               RLDG+T   +R  ++ +FN+P+N      L+S++AG  G+NL  ANR+++ D  WNP
Sbjct: 555  PVMRLDGQTSIKKRHAMITKFNDPMNPHSFVFLLSSKAGGCGVNLIGANRLVLFDPDWNP 614

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTI 1289
              D QA+ R WR GQ K  + YR  + GT+EEKIY+RQ+ K+GL+A +V     Q+  ++
Sbjct: 615  ANDKQALARVWRDGQKKSCYIYRFFSTGTIEEKIYQRQICKDGLSAMLVSDGENQIKDSL 674

Query: 1290 SKEEMLHLFEFGDD 1303
            S E +  LF   +D
Sbjct: 675  STELVKDLFRLRED 688


>gi|27819922|gb|AAL39744.2| LD35220p, partial [Drosophila melanogaster]
          Length = 788

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 184/600 (30%), Positives = 298/600 (49%), Gaps = 100/600 (16%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +  ++T +
Sbjct: 156  LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 207

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 832
            R        +  A++V+P +++ NW++EF KW    L   P+     E+  R      + 
Sbjct: 208  RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMT 267

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
              R    V LI Y  FR            +  EI    + G  +++CDE H +KN+   T
Sbjct: 268  SARLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 313

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
             QAL  +K +RR+ L+G+P+QN+L EYY +V+FV    LG++  F+  F++ I  GQ+T+
Sbjct: 314  YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 373

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ST ++ +   +++  L   +   + R    ++ K LP K   VI  KL+ +Q  LY  FL
Sbjct: 374  STEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFL 433

Query: 1013 DLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL--QLT-KDKGYPSREDAE 1063
                  +D+V       NEK   +  A    L +I +HP ++  +LT ++KG+ + ++  
Sbjct: 434  K-----SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVL 488

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
             S+             KP+++N  L GK                              +L
Sbjct: 489  PSNY------------KPKDLNPELSGK-----------------------------FML 507

Query: 1124 LDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            LD +   + +   DK ++ S    TLDL E    +L R  K G        + RLDG   
Sbjct: 508  LDFMLAAIRAEGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMS 555

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
              +R K+V+RFN+P +      ++S++AG  G+NL  ANR+ + D  WNP  D QA+ R 
Sbjct: 556  IKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARV 614

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1300
            WR GQ KP + YRL+A G++EEKI +RQ  K+ L++ ++D  +   +  +++++  LF F
Sbjct: 615  WRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTF 674


>gi|224052526|ref|XP_002188227.1| PREDICTED: DNA excision repair protein ERCC-6 [Taeniopygia guttata]
          Length = 1449

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 193/680 (28%), Positives = 306/680 (45%), Gaps = 133/680 (19%)

Query: 632  KKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASI 691
            K K+RR  DD ++    +R   + K ++ERLK  + Q +             +LS  + +
Sbjct: 404  KHKVRRWRDDGDVDYYKQR---LRKWQKERLKDKEHQTAE------------ELSEESDV 448

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK 751
            E                  EE  ++P  +  KL  +Q  G+R++WE   Q          
Sbjct: 449  EF-----------------EEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA-------- 483

Query: 752  GLGCILAHTMGLGKTFQVIAFL----YTAMRSVN-----LGLRTALIVTPVNVLHNWKQE 802
              G IL   MGLGKT Q+IAFL    Y+ MR+        GL   +IV P  VLH W +E
Sbjct: 484  --GGILGDEMGLGKTIQIIAFLAGLSYSNMRTRGSNYRYQGLGPTVIVCPATVLHQWVKE 541

Query: 803  FMKWRPSELKPLRVFMLEDVSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR 860
            F  W P    P RV +L +       + +L+ +  +  G+ +  Y+  R +    H  D 
Sbjct: 542  FHTWWP----PFRVAVLHETGSYTKSKVKLIHEIASCHGILITSYSYIRLMQDDIHTYDW 597

Query: 861  NMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
            +               ++ DE H I+N  A  T A KQ +   RI L+GSP+QNNL E +
Sbjct: 598  HY--------------VILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLKELW 643

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRM 979
             + DF+  G LG+   F  +F  PI  G + N++   VK   + + +L + +  + ++RM
Sbjct: 644  SLFDFIFPGKLGTLPVFMEQFSVPITMGGYCNASPVQVKTAYKCACVLRDTINPYLLRRM 703

Query: 980  DMNV-VKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL 1038
              +V +   LP K   V+  +L+  QR++Y+ +++          + +I      G   L
Sbjct: 704  KADVKMSLSLPDKNEQVLFCRLTEEQRQIYQNYINSKEVYQILNGDMQI----LLGLSTL 759

Query: 1039 AQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
             +I NHP                               + + PR +      + +D   Q
Sbjct: 760  RKICNHPDF-----------------------------VADSPRILKSVPDAEAEDP-NQ 789

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
              +W              SGKM+++  +L +    G + L F+QS   + ++E ++    
Sbjct: 790  FGYWKR------------SGKMIVVESLLKIWHKQGHRVLFFTQSRQMMQILEVFVR--- 834

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
                      +   + R+DG T  + RQ LV ++NE  +K +   L++TR G +G+NL  
Sbjct: 835  ---------YRNYSYLRMDGTTAVASRQPLVTKYNE--DKSIFLFLLTTRVGGIGVNLVG 883

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            A+RVII D  WNP+ D QA  RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  R
Sbjct: 884  ADRVIIYDPDWNPSVDTQARERAWRIGQKKEVTVYRLLTAGTIEEKIYHRQIFKQFLTNR 943

Query: 1279 VVDRQQVHRTISKEEMLHLF 1298
            V+   + +R     ++  LF
Sbjct: 944  VLKDPKQNRFFKSNDLYELF 963


>gi|237837635|ref|XP_002368115.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49]
 gi|211965779|gb|EEB00975.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49]
 gi|221509119|gb|EEE34688.1| transcriptional regulator atrx, putative [Toxoplasma gondii VEG]
          Length = 873

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 175/614 (28%), Positives = 298/614 (48%), Gaps = 95/614 (15%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+ V +   ++  L+ HQ  G++FM++ ++  +++ +    G GCILA  MGLGKT Q I
Sbjct: 149  EKKVEVDPMLTRWLREHQRQGVKFMFDCLM-GLKEFQ----GEGCILADDMGLGKTLQSI 203

Query: 771  AFLYTAMR----SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
              L+T +          +R A++V P ++++NW  E  KW               V+ + 
Sbjct: 204  TILWTLLEQNIEGTQPAVRRAVVVCPASLVNNWAAEIQKWLQGRCG------CTPVADNC 257

Query: 827  RAELLAKWRA-----KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCD 880
            + ++++K+       +  + +  Y  FR      HV          H L+  P D++VCD
Sbjct: 258  KEKVVSKFEGFKYDRQSRILIASYETFR-----MHV----------HRLEGVPIDMVVCD 302

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            EAH +KN +  T+ A+ ++  ++R+ L+G+P+QN+L E++ +V       +G +H FR R
Sbjct: 303  EAHRLKNDKTKTSLAIIELPAKKRLLLSGTPIQNDLDEFFALVSLCNPNVVGDAHTFRRR 362

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKL 1000
            + NPI  G+  ++T +  ++  +R   L      F+ R   +++ K LPPK V  +  +L
Sbjct: 363  YANPILVGREPDATEDQQQLAAERLTELSSLTNLFILRRTNSLLAKVLPPKVVLNVFCRL 422

Query: 1001 SPLQRRLYKRFLDLHG----FTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL--QLTKDK 1054
            +PLQ+  Y+ FL        FT +            +  Q L ++ NHP ++  Q    +
Sbjct: 423  TPLQKEFYRSFLSSKSCRKMFTAEAEGKGGFTGRVLSSIQGLMKLCNHPSLVKSQAQMLQ 482

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
            G+   E  E   S+ +++     G+K R+                               
Sbjct: 483  GF---EKCEKYFSELDLE-----GQKARS--------------------------RMVRT 508

Query: 1115 DYSGK---MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
            + SGK   +  LLD++   +N  DK ++ S    TLDL +                  G 
Sbjct: 509  EISGKLLLLARLLDVIRTTTN--DKIVLISNYTQTLDLFDRMCRDC------------GY 554

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
               RLDG+T   +R  ++ +FN+P+N      L+S++AG  G+NL  ANR+++ D  WNP
Sbjct: 555  PVMRLDGQTSIKKRHAMITKFNDPMNPHSFVFLLSSKAGGCGVNLIGANRLVLFDPDWNP 614

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTI 1289
              D QA+ R WR GQ K  + YR  + GT+EEKIY+RQ+ K+GL+A +V     Q+  ++
Sbjct: 615  ANDKQALARVWRDGQKKSCYIYRFFSTGTIEEKIYQRQICKDGLSAMLVSDGENQIKDSL 674

Query: 1290 SKEEMLHLFEFGDD 1303
            S E +  LF   +D
Sbjct: 675  STELVKDLFRLRED 688


>gi|212534456|ref|XP_002147384.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
            18224]
 gi|210069783|gb|EEA23873.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
            18224]
          Length = 808

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 202/626 (32%), Positives = 300/626 (47%), Gaps = 107/626 (17%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            V ++ +  V I   +S  L+ HQ+ G++F++      I      +   GCI+A  MGLGK
Sbjct: 197  VEDRPKVPVVIDPRLSKILRPHQIEGVKFLYRCTTGMI-----DENANGCIMADEMGLGK 251

Query: 766  TFQVIAFLYTAMRSVNLGLRTAL----IVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLE 820
            T Q I+ ++T ++      RT +    I  P  ++ NW  E +KW  P  + P   F+++
Sbjct: 252  TLQCISLMWTLLKQSPEAGRTTVQKCVIACPSTLVRNWANELVKWLGPDAVTP---FVID 308

Query: 821  DVSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               +  +AEL   L +W    G      V ++ Y   R      +V+D          L+
Sbjct: 309  --GKATKAELSSQLKQWAIASGRSIVRPVLIVSYETLR-----LNVED----------LK 351

Query: 872  DGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
            D P  +L+CDE H +KN  + T + L  +   RR+ L+G+P+QN+L EY+ +V F     
Sbjct: 352  DTPIGLLLCDEGHRLKNKESLTWKELNSLNVSRRVILSGTPIQNDLSEYFALVHFANPNL 411

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 990
            LGS +EFR +F+ PI  G+   ++ ED K  ++R   L   +  F+ R   +++ K LP 
Sbjct: 412  LGSQNEFRKKFEIPILRGRDAAASDEDRKKGDERLSELSAIVNKFIIRRTNDILSKYLPI 471

Query: 991  KTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA-GYQALAQI------WN 1043
            K   V+   LS  Q  LY  FL          S+ +IR      G Q L  I       N
Sbjct: 472  KYEHVVFCNLSEFQLNLYNHFL----------SSPEIRSLLRGKGSQPLKAIGLLKKLCN 521

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP +L L +D         E    D   DY    G          +G++ D    K W  
Sbjct: 522  HPDLLDLARD-----LPGCEQYFPD---DYVPPDG----------RGRDRD---IKSW-- 558

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
                        YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R   
Sbjct: 559  ------------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRA 602

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
             G L        RLDG    ++RQKLV++FN+P N      L+S++AG  GINL  ANR+
Sbjct: 603  YGCL--------RLDGTMNVNKRQKLVDKFNDP-NGEEFIFLLSSKAGGCGINLIGANRL 653

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            ++ D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD 
Sbjct: 654  VLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDS 713

Query: 1283 -QQVHRTISKEEMLHLFEFGDDENPD 1307
             + V R  S + +  LF+F  D   D
Sbjct: 714  AEDVERHFSLDSLRELFQFKPDTRSD 739


>gi|154338237|ref|XP_001565343.1| putative DNA repair and recombination protein RAD54 [Leishmania
            braziliensis MHOM/BR/75/M2904]
 gi|134062392|emb|CAM42253.1| putative DNA repair and recombination protein RAD54 [Leishmania
            braziliensis MHOM/BR/75/M2904]
          Length = 1126

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 184/604 (30%), Positives = 299/604 (49%), Gaps = 88/604 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLG---CILAHTMGLGKTFQVIAFLYTA 776
            I  KL+ HQ++G++F+++ I        +G++ LG    ILA  MGLGKT Q +A +YT 
Sbjct: 432  IGDKLRPHQIIGVKFLFDCI--------TGERMLGYHGAILADEMGLGKTIQTVATIYTC 483

Query: 777  MRSVNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK 833
            ++    G  TA   L+VTP +++ NW  EF KW       ++ F + + S  +   ++++
Sbjct: 484  LKQGKHGQPTARKCLVVTPSSLVKNWCNEFDKWLGE--GAVKHFAISE-STPKGDRIISR 540

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
            +   G V +I Y   R     K++   +  R +        +++VCDE H +KN    TT
Sbjct: 541  FDGDGDVLVISYDQLR-----KYIDRLSRLRFV--------ELVVCDEGHRLKNAEVKTT 587

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            +A+  +  + RI L+G+P+QN+L E++ MV+FV  G LG+   F   F+ P+  G+  + 
Sbjct: 588  KAVDMLPTRNRIILSGTPIQNDLSEFHAMVNFVNPGILGNRDLFTRVFEEPVSLGRDPDC 647

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
                  +   R+H L    + F+ R   ++ +  LPPK    + V+L   Q + Y++  D
Sbjct: 648  PDHLKSLGRDRAHYLSMLTQRFILRRTQSINESYLPPKVDVTVFVRLGAKQEQAYQKLAD 707

Query: 1014 L--HGFTNDRVSNEKIRK------SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDS 1065
            +         V    +RK       F        Q+ N  G     +  G   R     S
Sbjct: 708  IVESAECTPLVLISALRKLCNHMDLFHDAVHLSHQVGNGIGASAQQQQAG---RRRGRSS 764

Query: 1066 SSDE--NMDYNVVI-GEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 1122
            ++DE   + ++V+  G KP +++                            +DY  KM  
Sbjct: 765  AADEPQGIPFSVLPKGFKPGSLS----------------------------MDYGSKMHF 796

Query: 1123 LLDILTMCSNMG--DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT 1180
            +  +L      G  DK ++ S    TLD+I    +             K   +++LDG T
Sbjct: 797  VSLVLDELRENGEHDKLVIVSNFTQTLDIIAALCN------------SKRIAYFQLDGST 844

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
               +RQ+LV+ FN P ++ V   L+S++AG +G+NL  ANR+I+ D  WNP  D QA+ R
Sbjct: 845  PIKKRQQLVDYFNVPDSQEV-VFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGR 903

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT-ISKEEMLHLFE 1299
             WR GQ K VF YRL++ GT+EEKIY+RQV+K+GL+A VVD Q+  +   + EE+  LF+
Sbjct: 904  VWRDGQKKRVFIYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSKQHFTLEELKSLFK 963

Query: 1300 FGDD 1303
            +  D
Sbjct: 964  YKVD 967


>gi|452004580|gb|EMD97036.1| hypothetical protein COCHEDRAFT_118646 [Cochliobolus heterostrophus
            C5]
          Length = 785

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 185/628 (29%), Positives = 292/628 (46%), Gaps = 95/628 (15%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    V  E+    V I   ++  L+ HQV G++F++      I       K  GCI+
Sbjct: 163  ILGLKKKVDNERPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMI-----DPKANGCIM 217

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q I  ++T ++ S   G   ++  +I  P +++ NW  E +KW   +   
Sbjct: 218  ADEMGLGKTLQCITLMWTLLKQSPEAGKSTIQKCVIACPSSLVRNWANELVKWLGKDA-- 275

Query: 814  LRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFRNL--SFGKHVKDRNMAR 864
            +  F ++   S++   + + +W    G      V ++ Y   R     FG          
Sbjct: 276  VTPFAIDGKASKEELIQQIRQWSIASGRAVVRPVLIVSYETLRLYVDEFG---------- 325

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                  Q    +++CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ +++
Sbjct: 326  ------QTPIGLMLCDEGHRLKNGDSLTFTALNSLNVQRRVILSGTPIQNDLSEYFALLN 379

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F   G+LG+  EFR +F+ PI  G+  N T  D++  N+R   L   +  F+ R   +++
Sbjct: 380  FANPGYLGTRMEFRKQFEIPILKGRDANGTDADIQKGNERLTELLGLVNKFIIRRTNDIL 439

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
             K LP K   V+   L+P Q+ LY  F+   D+      + S              L ++
Sbjct: 440  SKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQSLLRGKGSQP------LKVIGMLKKL 493

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NHP +L L +D   P  ED                             K  + F QKD 
Sbjct: 494  CNHPDLLNLPED--LPGCED-----------------------------KLPEDFVQKDA 522

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                     +    YSGKM +L  +L  + +   DK ++ S    TLD+           
Sbjct: 523  RGRDREVKVW----YSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCR----- 573

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
                    +G   +RLDG    S+RQKLV++FN+P +      L+S++AG  G+NL  AN
Sbjct: 574  -------SRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEF-VFLLSSKAGGCGLNLIGAN 625

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+++ D  WNP  D QA+ R WR GQ K  F YR +  GT+EEK+++RQ  K+ L++ VV
Sbjct: 626  RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVV 685

Query: 1281 DR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            D  + V R  S + +  LF++ D+   D
Sbjct: 686  DSAEDVERHFSLDSLRELFQYRDNTTSD 713


>gi|17136368|ref|NP_476661.1| okra [Drosophila melanogaster]
 gi|74960637|sp|O76460.1|RAD54_DROME RecName: Full=DNA repair and recombination protein RAD54-like;
            Short=DmRAD54; AltName: Full=Protein okra; AltName:
            Full=RAD54 DNA repair protein
 gi|3264618|gb|AAC24577.1| Rad54 homolog OKR [Drosophila melanogaster]
 gi|7295868|gb|AAF51168.1| okra [Drosophila melanogaster]
 gi|220947310|gb|ACL86198.1| okr-PA [synthetic construct]
 gi|220956782|gb|ACL90934.1| okr-PA [synthetic construct]
          Length = 784

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 184/600 (30%), Positives = 298/600 (49%), Gaps = 100/600 (16%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +  ++T +
Sbjct: 152  LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 832
            R        +  A++V+P +++ NW++EF KW    L   P+     E+  R      + 
Sbjct: 204  RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMT 263

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
              R    V LI Y  FR            +  EI    + G  +++CDE H +KN+   T
Sbjct: 264  SARLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
             QAL  +K +RR+ L+G+P+QN+L EYY +V+FV    LG++  F+  F++ I  GQ+T+
Sbjct: 310  YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ST ++ +   +++  L   +   + R    ++ K LP K   VI  KL+ +Q  LY  FL
Sbjct: 370  STEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFL 429

Query: 1013 DLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL--QLT-KDKGYPSREDAE 1063
                  +D+V       NEK   +  A    L +I +HP ++  +LT ++KG+ + ++  
Sbjct: 430  K-----SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVL 484

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
             S+             KP+++N  L GK                              +L
Sbjct: 485  PSNY------------KPKDLNPELSGK-----------------------------FML 503

Query: 1124 LDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            LD +   + +   DK ++ S    TLDL E    +L R  K G        + RLDG   
Sbjct: 504  LDFMLAAIRAEGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMS 551

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
              +R K+V+RFN+P +      ++S++AG  G+NL  ANR+ + D  WNP  D QA+ R 
Sbjct: 552  IKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARV 610

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1300
            WR GQ KP + YRL+A G++EEKI +RQ  K+ L++ ++D  +   +  +++++  LF F
Sbjct: 611  WRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTF 670


>gi|41055574|ref|NP_957438.1| DNA repair and recombination protein RAD54-like [Danio rerio]
 gi|28277973|gb|AAH46050.1| RAD54-like (S. cerevisiae) [Danio rerio]
          Length = 738

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 187/631 (29%), Positives = 311/631 (49%), Gaps = 93/631 (14%)

Query: 688  GASIEVLGDAITGY-IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKV 746
            GA +     AI+ + ++   +EK    V +   +S  L+ HQ  G++F+W+ +  + R++
Sbjct: 110  GALVLYEPPAISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQREGVKFLWDCV--TGRRI 167

Query: 747  KSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEF 803
            ++     GCI+A  MGLGKT Q I  ++T ++        +   ++V+P +++ NW  E 
Sbjct: 168  ENS---YGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYNEV 224

Query: 804  MKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHV 857
             KW    ++P+ +   +  S+D     L  + ++ G      + +I Y  FR        
Sbjct: 225  GKWLGGRVQPVAI---DGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFR-------- 273

Query: 858  KDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLM 917
                +  E+ H  + G  +++CDE H +KN+   T  AL  +  QRR+ ++G+P+QN+L+
Sbjct: 274  ----LHAEVLHKGKVG--LVICDEGHRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLL 327

Query: 918  EYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQ 977
            EY+ +V FV  G LG++ EF+ RF+ PI  G+  +++ +D     Q+   L   +   + 
Sbjct: 328  EYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQKLQELISIVNRCLI 387

Query: 978  RMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA 1037
            R   +++ K LP K   V+   L+PLQ+ LYK FL       + +   KI  S  +   +
Sbjct: 388  RRTSDILSKYLPVKIEQVVCCNLTPLQKELYKLFLK-QAKPVESLQTGKISVSSLSSITS 446

Query: 1038 LAQIWNHPGILQ---LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDD 1094
            L ++ NHP ++    LT ++G+           D  +D                      
Sbjct: 447  LKKLCNHPALIYEKCLTGEEGF-----------DGALD---------------------- 473

Query: 1095 GFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFY 1153
              F +++    +      E   SGKM++L  IL M  +   DK ++ S    TLDL E  
Sbjct: 474  -LFPQNYSTKAV------EPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFE-- 524

Query: 1154 LSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
                       KL +  +  Y RLDG     +R K+VERFN P +      ++S++AG  
Sbjct: 525  -----------KLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEF-IFMLSSKAGGC 572

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  + YRL++ GT+EEKI +RQ  K
Sbjct: 573  GLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHK 632

Query: 1273 EGLAARVVDRQQ-VHRTISKEEMLHLFEFGD 1302
            + L++ VVD +Q V R  S  E+  LF   +
Sbjct: 633  KALSSCVVDEEQDVERHFSLGELRELFSLNE 663


>gi|1765914|emb|CAA71278.1| RAD54 [Drosophila melanogaster]
          Length = 784

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 184/600 (30%), Positives = 298/600 (49%), Gaps = 100/600 (16%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +  ++T +
Sbjct: 152  LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 832
            R        +  A++V+P +++ NW++EF KW    L   P+     E+  R      + 
Sbjct: 204  RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMT 263

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
              R    V LI Y  FR            +  EI    + G  +++CDE H +KN+   T
Sbjct: 264  SARLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
             QAL  +K +RR+ L+G+P+QN+L EYY +V+FV    LG++  F+  F++ I  GQ+T+
Sbjct: 310  YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ST ++ +   +++  L   +   + R    ++ K LP K   VI  KL+ +Q  LY  FL
Sbjct: 370  STEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFL 429

Query: 1013 DLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL--QLT-KDKGYPSREDAE 1063
                  +D+V       NEK   +  A    L +I +HP ++  +LT ++KG+ + ++  
Sbjct: 430  K-----SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVL 484

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
             S+             KP+++N  L GK                              +L
Sbjct: 485  PSNY------------KPKDLNPELSGK-----------------------------FML 503

Query: 1124 LDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            LD +   + +   DK ++ S    TLDL E    +L R  K G        + RLDG   
Sbjct: 504  LDFMLAAIRAEGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMS 551

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
              +R K+V+RFN+P +      ++S++AG  G+NL  ANR+ + D  WNP  D QA+ R 
Sbjct: 552  IKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARV 610

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1300
            WR GQ KP + YRL+A G++EEKI +RQ  K+ L++ ++D  +   +  +++++  LF F
Sbjct: 611  WRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTF 670


>gi|156039515|ref|XP_001586865.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980]
 gi|154697631|gb|EDN97369.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 861

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 194/647 (29%), Positives = 309/647 (47%), Gaps = 100/647 (15%)

Query: 679  VTLDGDLSAGASIEVLGDAITGYIVNVVR-EKGEEAVRIPSSISAKLKAHQVVGIRFMWE 737
            + LD  L+  +  E+LG      I  VV  E+ +  V I   ++  L+ HQ+ G++FM+ 
Sbjct: 232  LKLDAPLAHKSLAEILG------IKKVVEGERPKVPVVIDPRLAKVLRPHQIEGVKFMYR 285

Query: 738  NIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLGLRT---ALIVTPV 793
             +   +      D+  GCI+A  MGLGKT Q I  ++T ++ S + G  T   A+I  P 
Sbjct: 286  CVTGMV-----DDRANGCIMADEMGLGKTLQCITLMWTLLKQSTDAGKPTINKAIIACPS 340

Query: 794  NVLHNWKQEFMKWR-PSELKPLRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGY 845
            +++ NW  E +KW  P  ++P   F ++   S++   + L +W    G      V ++ Y
Sbjct: 341  SLVKNWANELVKWLGPDAIQP---FAIDGKASKEELIQQLRQWAIASGRSITRPVIIVSY 397

Query: 846  TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRI 905
               R               E+ H  Q G  +++CDE H +KN  + T  AL  +   RR+
Sbjct: 398  ETLRL-----------YVDELKHT-QIG--LMLCDEGHRLKNGDSQTFVALNSLNVTRRV 443

Query: 906  ALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRS 965
             L+G+P+QN+L EY+ +V F   G LG+  EFR +++ PI+ G+    + +D +  ++  
Sbjct: 444  ILSGTPIQNDLTEYFSLVSFANPGLLGTRMEFRKKYELPIQRGRDAAGSDKDRQKGDECI 503

Query: 966  HILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRV 1022
              L   +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   D+      + 
Sbjct: 504  KDLLNVVNKFIIRRTNDILSKYLPVKYEHVVFCSLAPFQLDLYNHFITSPDIKALLRGKG 563

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPR 1082
            S              L ++ NHP +L L+ D     +   ED    +             
Sbjct: 564  SQP------LKAIGMLKKLCNHPDLLNLSDDLPGCEKYWPEDYVPKDG------------ 605

Query: 1083 NMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFS 1141
                  +G++ D    K W              YSGKM +L  +L  +  +  DK ++ S
Sbjct: 606  ------RGRDRD---IKPW--------------YSGKMQVLDRMLARIRQDTNDKIVLIS 642

Query: 1142 QSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVK 1201
                TLD+ +    KL R    G L        RLDG    ++RQKLV++FN+P  +   
Sbjct: 643  NYTQTLDMFD----KLCRNRGYGSL--------RLDGTMNVTKRQKLVDKFNDPDGQEF- 689

Query: 1202 CTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTM 1261
              L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+
Sbjct: 690  VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTI 749

Query: 1262 EEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            EEKI++RQ  K+ L++ VVD  + V R  S + +  LF++  D   D
Sbjct: 750  EEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRKDTTSD 796


>gi|431897839|gb|ELK06673.1| Putative DNA repair and recombination protein RAD26-like protein
            [Pteropus alecto]
          Length = 1541

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 188/640 (29%), Positives = 288/640 (45%), Gaps = 128/640 (20%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G +F++ + IQ          G GCIL   MGLGKT QVI+FL  
Sbjct: 115  IPYTINRYLRDYQREGAQFLYGHFIQ----------GRGCILGDDMGLGKTVQVISFLAA 164

Query: 776  AMR------------------------SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                          +++  +  LIV P++VL+NW+ E   W     
Sbjct: 165  VLHKRGTREDIENNMPEFLLRSLKKEPPLSISKKMFLIVAPLSVLYNWRDELDTW----- 219

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  V L  Y   R            +  +  ++L+
Sbjct: 220  GYFRVTILHGNKKDN--ELIRVKQRKCEVALTTYETLR------------LCLDDLNSLE 265

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 266  WS--AVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 323

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS   F+ +F +P+E+GQ   +T  ++    +    L +++ G+  R    ++K  LP K
Sbjct: 324  GSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMQKLAKKMSGWFLRRTKTLIKDQLPKK 383

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGF----------------------------TNDRVS 1023
               ++   L+  Q+ +Y+  L+                                TN R  
Sbjct: 384  EDRIVYCSLTDFQKAVYQTVLETEDVILILQSSEPCTCSSGRKRRNCCYKASISTNSR-- 441

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 1083
             E ++  +F+    L ++ NH  +LQ            A  +S  +      +  +    
Sbjct: 442  GETVKTLYFSYLAVLQKVANHVALLQ------------AASTSKQQETIIKRICDQVFSR 489

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 1143
              D++Q   D  F             T  +  YSGKM +L  +L  C    DK L+FS S
Sbjct: 490  FPDYVQKSKDAAF------------QTLSDPKYSGKMKVLEQLLNHCRKNNDKVLLFSFS 537

Query: 1144 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1203
               LD+++ Y                G D+ RLDG T+S ER K+V+ FN    + V   
Sbjct: 538  TKLLDVLQQY------------CMASGLDYRRLDGSTKSEERIKIVKEFNS--TQDVNIC 583

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            L+ST AG LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V  +RL++ GT+EE
Sbjct: 584  LVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEE 643

Query: 1264 KIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
             +Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 644  IMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 683


>gi|342185698|emb|CCC95183.1| putative SNF2 DNA repair protein [Trypanosoma congolense IL3000]
          Length = 1039

 Score =  255 bits (652), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 187/601 (31%), Positives = 288/601 (47%), Gaps = 52/601 (8%)

Query: 707  REKGEEAVRIPSSIS--AKLKAHQVVGIRFMWENIIQS-IRKVKSGDKGLGCILAHTMGL 763
            REK EE    P+  +   KL+AHQ+ GIRFMW  + +  + KV +    +GCILAHTMGL
Sbjct: 255  REKIEEGFS-PTQKTDRLKLRAHQMKGIRFMWSILAEGPVGKVPA----VGCILAHTMGL 309

Query: 764  GKTFQVIAFLYTAMRSVNLG-----------LRTALIVTPVNVLHNWKQEFMKWR---PS 809
            GKT Q I FL+  M+ + L             +  LI  P +   +W  +F  W    P 
Sbjct: 310  GKTCQAIIFLHLFMQEIGLSNDGCVKKKKRLRKRVLIAVPKSTRCSWVDQFEMWSNFFPP 369

Query: 810  ELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA 869
              +   + + E  S + R +L   W   GGV L GY     +      K  N        
Sbjct: 370  SQRIELLCLTETSSAESRVKLFKSWITHGGVLLTGYEMLTKVYKLYREKSDNK-----FT 424

Query: 870  LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
              +  D+L+CDEAH +K         LK +   RR+ +TG+PLQN L EY+ MVDF    
Sbjct: 425  TSEYIDLLICDEAHRLKCENLQVALTLKNLNPLRRLLITGTPLQNYLKEYWVMVDFALSK 484

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP 989
            +  +  +F + F NPIE+  +  +T ++V +   ++  L ++LK FVQ  D  ++K++LP
Sbjct: 485  YF-NKDQFHHYFTNPIESSANRRATQDEVTVARTKTAALIQELKNFVQCYDSTILKQELP 543

Query: 990  PKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIR-KSFFAGYQALAQIWNHPGIL 1048
            P   +V+ V+L+ +Q  L+  F         R++   I   +F      L +I  HP +L
Sbjct: 544  PLQEYVVFVQLTQMQAELHDEF--------TRLAKRCISANNFLQTIACLRKICTHPQML 595

Query: 1049 QLTK-DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
              T  + G   +E   D SS  N D             D L    D+G+      N    
Sbjct: 596  FSTVFNTGSRGKESQRDESSSGNGDLAAAF----ERYEDVLTA--DEGY-----RNLCQP 644

Query: 1108 EHTYKELDYSG-KMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1166
               Y      G K+ + L I+      G+++L+F+     LD +E  +  +     +   
Sbjct: 645  PPGYIPTPQDGSKVYVALLIVKEAMKRGERTLLFTMYNKLLDFLEVAIKHMNDVWLEDGS 704

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
                  + RLDG    ++R   ++ F       V   L+S RAG +G+ + +A RVII+D
Sbjct: 705  ITTPIRFCRLDGTRTEADRSYALKTFASCDGPNV--FLVSMRAGGVGLTITAATRVIIMD 762

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 1286
            G +NP  + QAI RA+RYGQT+PVFAY L+ HGT E ++++ ++ KE L   +V+   + 
Sbjct: 763  GGFNPAEEKQAIGRAYRYGQTQPVFAYHLICHGTFEHRVFEHKLAKEWLFRTIVEEASLK 822

Query: 1287 R 1287
            R
Sbjct: 823  R 823


>gi|260801499|ref|XP_002595633.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae]
 gi|229280880|gb|EEN51645.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae]
          Length = 1464

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 192/626 (30%), Positives = 288/626 (46%), Gaps = 111/626 (17%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
              ++P     KL  +Q  G+R++WE   Q            G I+   MGLGKT Q I F
Sbjct: 504  GFKLPGETWNKLYKYQQTGVRWLWELHSQQA----------GGIMGDEMGLGKTIQAIVF 553

Query: 773  LY---------TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED-- 821
            LY           + +  +GL   L+V PV VLH W +EF  W P     +RV +L +  
Sbjct: 554  LYGLQYGNVRNRGIMTKYIGLGPCLVVAPVTVLHQWVREFHTWFPR----VRVAILHESG 609

Query: 822  ---VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV 878
                S+DR    +A+ R   GV +  Y          +++  ++     H        ++
Sbjct: 610  TFTTSKDRLIREIARDR---GVLVTSYQEV-------NLRQDSLLHYDWH-------YVI 652

Query: 879  CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFR 938
             DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DFV  G LG+   F 
Sbjct: 653  LDEGHKIRNPDAKVTLACKQFRTPHRIILSGSPMQNNLRELWSLCDFVFPGKLGTLPVFM 712

Query: 939  NRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL--PPKTVFVI 996
             +F  PI  G + N+T   V+   + + +L + +  ++ R   N VK +L  P K+  V+
Sbjct: 713  EQFSVPITQGGYANATPVQVQTAYKCACVLRDTINPYLLRRMKNDVKMNLNLPNKSEQVL 772

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF--FAGYQALAQIWNHPGILQLTKDK 1054
              +++  Q+  YK +L        R   + +   +  FAG   L +I NHP ++      
Sbjct: 773  FCRITEEQKEAYKDYL------GSRECQQILDGQYQVFAGLITLRKICNHPDLVT----- 821

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
            G P                 +++G              D+    KD       +H Y   
Sbjct: 822  GGP----------------RIMVG-------------TDESTLTKD-------QH-YGYW 844

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGKM+++  +L M    G + L+FSQS   LDL+E ++              +   + 
Sbjct: 845  KRSGKMIVVNTLLKMWHKQGHRVLLFSQSKQMLDLMEEFVQD------------QSYTYM 892

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            R+DG T  S RQ  + +FN+  +  +   L++TR G LG+NL  ANRVII D  WNP+ D
Sbjct: 893  RMDGTTTISSRQPKITKFNK--DTSIFVFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTD 950

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            +QA  RAWR GQ+K V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R     +M
Sbjct: 951  MQARERAWRIGQSKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVLKDPRQRRFFKSNDM 1010

Query: 1295 LHLFEFGDDENPDPLTAVSKENGQGS 1320
              LF    D+N +     +   G GS
Sbjct: 1011 YELFTLTCDDNKEGTETGAIFAGTGS 1036


>gi|365991713|ref|XP_003672685.1| hypothetical protein NDAI_0K02510 [Naumovozyma dairenensis CBS 421]
 gi|343771461|emb|CCD27442.1| hypothetical protein NDAI_0K02510 [Naumovozyma dairenensis CBS 421]
          Length = 872

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 193/624 (30%), Positives = 300/624 (48%), Gaps = 104/624 (16%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMW--------------ENIIQSIRKVKSGDKG-LGCIL 757
             V I   ++  L+ HQV G++F++              E +   I   +  ++G  GCI+
Sbjct: 249  PVVIDPKLTKILRPHQVEGVKFLYRCVTGLVMKDFLDAETVNTGIVAPQQNNRGAYGCIM 308

Query: 758  AHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKP 813
            A  MGLGKT Q IA ++T +R    G R     +IV P ++++NW  E +KW  P+ L P
Sbjct: 309  ADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLSP 368

Query: 814  LRVFMLEDV---SRDRRAELLAKW-RAKG-----GVFLIGYTAFRNLSFGKHVKDRNMAR 864
            L +   +          AE +  W +AKG      V +I Y   R          RN+ +
Sbjct: 369  LAIDGKKSSLASGSTTVAEAIKSWGQAKGRNIVKPVLIISYETLR----------RNVDQ 418

Query: 865  -EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMV 923
             + C        +++ DE H +KN  + T  AL  + C RR+ L+G+P+QN+L EY+ ++
Sbjct: 419  LQNCDV-----GLMLADEGHRLKNADSLTFTALDSINCPRRVILSGTPIQNDLSEYFALL 473

Query: 924  DFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNV 983
            +F   G LG+  EFR  F+ PI   +  +ST +++K   ++   L + +  F+ R   ++
Sbjct: 474  NFSNPGLLGTRSEFRKNFEIPILRSRDADSTDDEIKKGEEQLQKLSDIVSKFIIRRTNDI 533

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQ 1040
            + K LP K   VI V L P Q+ +Y+  +   D+          + ++         L +
Sbjct: 534  LSKYLPCKYEHVIFVDLKPFQKNVYQNLIKSRDIKKMMKGVGGTQPLK-----AIGVLKK 588

Query: 1041 IWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD 1100
            + NHP +L L ++       D  +  SD NM  N          +  +Q K         
Sbjct: 589  LCNHPSLLNLDEEL---DNFDNLEIPSDYNMSSN----------SRDIQPK--------- 626

Query: 1101 WWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
                           YSGK  +L   L  + +   DK ++ S    TLDLIE    K+ R
Sbjct: 627  ---------------YSGKFSILERFLHKIKTESDDKIVLISNYTQTLDLIE----KMCR 667

Query: 1160 PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
                G L        RLDG    ++RQKLV+RFN+P  +     L+S++AG  GINL  A
Sbjct: 668  TKHYGSL--------RLDGTMNINKRQKLVDRFNDPEGQEF-IFLLSSKAGGCGINLIGA 718

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NR+I++D  WNP  D QA+ R WR GQ K  F YR ++ G++EEKIY+RQ  K  L++ V
Sbjct: 719  NRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGSIEEKIYQRQSMKMSLSSCV 778

Query: 1280 VD-RQQVHRTISKEEMLHLFEFGD 1302
            VD ++ V R  S + +  LF++ D
Sbjct: 779  VDAKEDVERLFSADNLRQLFQYND 802


>gi|195031155|ref|XP_001988299.1| GH10642 [Drosophila grimshawi]
 gi|292630863|sp|B4JCS7.1|RAD54_DROGR RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=Protein okra
 gi|193904299|gb|EDW03166.1| GH10642 [Drosophila grimshawi]
          Length = 786

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 182/608 (29%), Positives = 299/608 (49%), Gaps = 115/608 (18%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +   +T +
Sbjct: 145  LSNVLRPHQREGVRFMYECV--------EGKRGSFNGCIMADEMGLGKTLQCVTLTWTLL 196

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
            R        +  A++V+P +++ NW++EF KW    +  L    +E  S++     L ++
Sbjct: 197  RQSADCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEETTRTLEQF 253

Query: 835  ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
                  R    V LI Y  FR      H+        +C   +    +++CDE H +KN+
Sbjct: 254  AMNTSTRCGTPVLLISYETFR---LYAHI--------LC---KTEVGMVICDEGHRLKNS 299

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               T QAL  +K +RR+ L+G+P+QN+L EY+ +V+FV    LG++ +F+  F+N I  G
Sbjct: 300  DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTATDFKRNFENAILRG 359

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQ----RMDMNVVKKDLPPKTVFVITVKLSPLQ 1004
            Q+ +ST  +     +R+ +  ++L G V     R    ++ K LP K   V+  KL+ +Q
Sbjct: 360  QNADSTDTE----RERALLKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQ 415

Query: 1005 RRLYKRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKG 1055
             ++Y  FL      +D+V       NEK   +  +    L ++ NHP ++      ++KG
Sbjct: 416  LQIYTNFLK-----SDQVCRSLADCNEKTSLTALSDITTLKKLCNHPDLIYEKLAAREKG 470

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
            +            EN    +    KP+++N  L GK                        
Sbjct: 471  F------------ENSQNVLPANYKPKDINPELSGK------------------------ 494

Query: 1116 YSGKMVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
                  +LLD +   + +N  DK ++ S    TLDL E    +L R        K+   +
Sbjct: 495  -----FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYSY 537

Query: 1174 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
             RLDG     +R K+V+RFN+P +      ++S++AG  G+NL  ANR+ + D  WNP  
Sbjct: 538  VRLDGTMTIKKRSKVVDRFNDP-SSDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN 596

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKE 1292
            D QA+ R WR GQ KP + YRL+A G++EEKI +RQ  K+ L++ ++D  + V +  +++
Sbjct: 597  DEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESVEKHFTRD 656

Query: 1293 EMLHLFEF 1300
            ++  LF F
Sbjct: 657  DLKDLFSF 664


>gi|417406219|gb|JAA49776.1| Putative snf2 family dna-dependent atpase domain-containing protein
            [Desmodus rotundus]
          Length = 1240

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 187/634 (29%), Positives = 289/634 (45%), Gaps = 120/634 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G +F++ + IQ          G GCIL   MGLGKT QVI+FL  
Sbjct: 115  IPYTINRYLRDYQREGAQFLYGHFIQ----------GRGCILGDDMGLGKTVQVISFLAA 164

Query: 776  AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                  RS+      ++  +  LIV P++VL+NW+ E   W     
Sbjct: 165  VLHKKGTREDIENNMPEFLLRSLKKEPPSSIAKKMFLIVAPLSVLYNWRDELDTW----- 219

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  + L  Y   R            +  +  ++L+
Sbjct: 220  GYFRVTILHGNKKD--TELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 265

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 266  WS--AVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 323

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS   F+ +F +P+E+GQ   +T  ++    +   +L  ++ G+  R    ++K  LP K
Sbjct: 324  GSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMQMLARRMTGWFLRRTKTLIKNQLPKK 383

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 384  EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCGSGRKRRNCCYKTNSHGETVKT 443

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
             +F+    L ++ NH  +LQ            A  +S  +      +  +      DF+Q
Sbjct: 444  LYFSYLTVLQKVANHVSLLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 491

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               D  F             T  +  YSGKM +L  +L+ C    DK L+FS S   LD+
Sbjct: 492  KSKDAAF------------ETLSDPKYSGKMKVLQQLLSHCRKNRDKVLLFSFSTKLLDV 539

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            ++ Y                G D+ RLDG T+S +R K+V+ FN    + V   L+ST A
Sbjct: 540  LQQY------------CMASGLDYRRLDGSTKSEDRIKIVKEFNG--TQDVNVCLVSTMA 585

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V  +RL++ GT+EE +Y RQ
Sbjct: 586  GGLGLNFTGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQ 645

Query: 1270 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            V K+ L   VV  +   R       SKE    LF
Sbjct: 646  VYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 679


>gi|198417079|ref|XP_002130103.1| PREDICTED: similar to RAD54-like [Ciona intestinalis]
          Length = 775

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 179/602 (29%), Positives = 297/602 (49%), Gaps = 87/602 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   +S  L+ HQ  G++F+++  +  +R VK      GCI+A  MGLGKT Q I  +
Sbjct: 162  VVVDPRLSKVLRPHQREGVKFLFD-CVTGVR-VKEQH---GCIMADEMGLGKTLQCITLM 216

Query: 774  YTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
            +T ++    +   +  A++V+P +++ NW++E  KW   +++ L +        DR  + 
Sbjct: 217  WTLLKQGPDMTPIIEKAVVVSPSSLVKNWEKEVNKWLGGQVQTLAIDSGSKQEIDRNLDQ 276

Query: 831  LAKW---RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
                   R    + LI Y  FR            +  ++ H  + G  +++CDE H +KN
Sbjct: 277  FMSQHGRRVGLPILLISYETFR------------LHAKVLHKGKIG--LVICDEGHRLKN 322

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
                T  AL +V C+RR+ L+G+P+QN+L+EY+ +V FV EG LG+++EF+ +F+ PI  
Sbjct: 323  CENQTYSALAKVNCKRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGTANEFKKKFEFPILR 382

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            G+ +++  +  K+   +   L + +   + R   +++ K LP KT  +I   L+ LQ  L
Sbjct: 383  GRDSSACDDHKKLGETKLKELVDLVNLCIIRRTSDILSKYLPVKTELIICCPLTTLQFEL 442

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQA--------LAQIWNHPGILQLTKDKGYPSR 1059
            Y  F +   F  D +   K RK    G  +        L ++ NHP ++       Y   
Sbjct: 443  YNSFANKQEFICDSIQPTKKRKKNSEGVTSGGLTAITQLKKLCNHPALI-------YEKC 495

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
               E    D    +       P N N  L                        + + SGK
Sbjct: 496  LQQESGCEDMRKIF-------PSNFNPKLV-----------------------QPELSGK 525

Query: 1120 MVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLD 1177
            M L+  +L +  ++  DK ++ S    TLDL E             +L +  +  + RLD
Sbjct: 526  MKLVDYLLAVTRTSTSDKFVLVSNYTQTLDLCE-------------QLCRSRRYMFVRLD 572

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G     +R K+VE+FN P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA
Sbjct: 573  GSMTIKKRAKVVEKFNNPSSPEF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQA 631

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLH 1296
            + R WR GQ KP F YRL+  GT+EEKI++RQ  K+ L++ VVD+++ V R  S++++  
Sbjct: 632  MARVWRDGQKKPCFIYRLLGTGTIEEKIFQRQAHKKALSSCVVDQEEDVARHFSRDQLRD 691

Query: 1297 LF 1298
            LF
Sbjct: 692  LF 693


>gi|3329473|gb|AAC26857.1| RAD54 DNA repair protein [Drosophila melanogaster]
          Length = 628

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 182/595 (30%), Positives = 295/595 (49%), Gaps = 100/595 (16%)

Query: 725  KAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAMRS--- 779
            + HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +  ++T +R    
Sbjct: 1    RPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPE 52

Query: 780  VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLAKWRAK 837
                +  A++V+P +++ NW++EF KW    L   P+     E+  R      +   R  
Sbjct: 53   CKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLG 112

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              V LI Y  FR            +  EI    + G  +++CDE H +KN+   T QAL 
Sbjct: 113  TPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLTYQALM 158

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             +K +RR+ L+G+P+QN+L EYY +V+FV    LG++  F+  F++ I  GQ+T+ST ++
Sbjct: 159  GLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQE 218

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
             +   +++  L   +   + R    ++ K LP K   VI  KL+ +Q  LY  FL     
Sbjct: 219  RQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLK---- 274

Query: 1018 TNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL--QLT-KDKGYPSREDAEDSSSD 1068
             +D+V       NEK   +  A    L +I +HP ++  +LT ++KG+ + ++   S+  
Sbjct: 275  -SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNY- 332

Query: 1069 ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL- 1127
                       KP+++N  L GK                              +LLD + 
Sbjct: 333  -----------KPKDLNPELSGK-----------------------------FMLLDFML 352

Query: 1128 -TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQ 1186
              + +   DK ++ S    TLDL E    +L R  K G        + RLDG     +R 
Sbjct: 353  AAIRAEGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMSIKKRS 400

Query: 1187 KLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
            K+V+RFN+P +      ++S++AG  G+NL  ANR+ + D  WNP  D QA+ R WR GQ
Sbjct: 401  KVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQ 459

Query: 1247 TKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1300
             KP + YRL+A G++EEKI +RQ  K+ L++ ++D  +   +  +++++  LF F
Sbjct: 460  KKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTF 514


>gi|366987377|ref|XP_003673455.1| hypothetical protein NCAS_0A05110 [Naumovozyma castellii CBS 4309]
 gi|342299318|emb|CCC67069.1| hypothetical protein NCAS_0A05110 [Naumovozyma castellii CBS 4309]
          Length = 875

 Score =  255 bits (651), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 193/625 (30%), Positives = 291/625 (46%), Gaps = 107/625 (17%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMW--------------ENIIQSIRKVKSGDKG-LGCILA 758
            V I   ++  L+ HQV G++F++              E +   I K +  ++G  GCI+A
Sbjct: 252  VVIDPKLTKILRPHQVEGVKFLYRCVTGLVMKDFLDAEAVNTGIVKTEQNNRGAYGCIMA 311

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPL 814
              MGLGKT Q IA ++T +R    G R     +IV P ++++NW  E +KW  P  L PL
Sbjct: 312  DEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELVKWLGPGTLSPL 371

Query: 815  RVFMLEDV---SRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMARE 865
             V   +          AE +  W    G      V +I Y   R              R 
Sbjct: 372  AVDGKKSSLASGNSTVAEAVHSWAQATGRNIVKPVLIISYETLR--------------RN 417

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
            +         +++ DE H +KN  + T  AL  + C RR+ L+G+P+QN+L EY+ +++F
Sbjct: 418  VDQLRNCDVGLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNF 477

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
               G LG+  EFR  F+ PI   +  +ST E++    ++   L   +  F+ R   +++ 
Sbjct: 478  SNPGLLGTRSEFRKNFELPILRSRDADSTDEEITKGEEQLQKLSTIVSKFIIRRTNDILS 537

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIW--- 1042
            K LP K   VI V L P Q+ +Y R L        R  N+ ++     G Q L  I    
Sbjct: 538  KYLPCKYEHVIFVNLKPFQKDVYHRLL------KSRDVNKMVKG--VGGTQPLKAIGVLK 589

Query: 1043 ---NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK 1099
               NHP ++ L         E+ +D    E  D   + G K R++               
Sbjct: 590  KLCNHPNLINLD--------EEIDDFDDLEIPDEYNMQGSKSRDV--------------- 626

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
                         +  +SGK  +L   L  + +   DK ++ S    TLDLIE    K+ 
Sbjct: 627  -------------QPQFSGKFAILERFLHKIKTESDDKIVLISNYTQTLDLIE----KMC 669

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
            R         K     RLDG    ++RQKLV+RFN+P  +     L+S++AG  GINL  
Sbjct: 670  R--------NKHYSSVRLDGTMTINKRQKLVDRFNDPEGQEF-IFLLSSKAGGCGINLIG 720

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANR+I++D  WNP  D QA+ R WR GQ K  F YR ++ G++EEKIY+RQ  K  L++ 
Sbjct: 721  ANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGSIEEKIYQRQSMKMSLSSC 780

Query: 1279 VVD-RQQVHRTISKEEMLHLFEFGD 1302
            VVD ++ V R  S + +  LF++ D
Sbjct: 781  VVDAKEDVERLFSSDNLRQLFQYND 805


>gi|68483838|ref|XP_714194.1| hypothetical protein CaO19.8240 [Candida albicans SC5314]
 gi|46435735|gb|EAK95111.1| hypothetical protein CaO19.8240 [Candida albicans SC5314]
          Length = 1055

 Score =  255 bits (651), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 187/653 (28%), Positives = 295/653 (45%), Gaps = 128/653 (19%)

Query: 704  NVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGL 763
            N+   K  E  ++P  I   L  +Q   ++++WE   Q            G I+   MGL
Sbjct: 251  NIADAKLNEKFKLPGDIYPSLFDYQKTCVQWLWELYTQKT----------GGIIGDEMGL 300

Query: 764  GKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV- 822
            GKT Q+I+FL   +    L  +  L+V P  VL+ W  EF +W P    PLR  +L  + 
Sbjct: 301  GKTIQIISFL-AGLHYSGLLDKPVLVVVPATVLNQWVNEFHRWWP----PLRCIILHSIG 355

Query: 823  --------------------------------SRDRRAELLAKWRAKGGVFLIGYTAFRN 850
                                            S+    E++ +   KG V +  Y   R 
Sbjct: 356  SGMNGSVSESKLEEYLESTDPDATQSSLHGIKSQINAQEIVDRVMEKGHVLVTTYVGLR- 414

Query: 851  LSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGS 910
              + KH+    + RE  +        +V DE H I+N  +D +   K++K   RI L+G+
Sbjct: 415  -IYSKHI----LPREWGY--------VVLDEGHKIRNPDSDISLTCKKIKTVNRIILSGT 461

Query: 911  PLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYE 970
            P+QNNL+E + + DFV  G LG+   F+  F  PI  G + NS +  VK   + + +L +
Sbjct: 462  PIQNNLIELWSLFDFVFPGRLGTLPVFQQEFSIPINIGGYANSNNLQVKTAYKCAVVLRD 521

Query: 971  QLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS 1030
             +  ++ R   + V +DLP K   V+ VKL+ +Q+ LY+ FL     + D  S  K +++
Sbjct: 522  LISPYMLRRLKSDVAQDLPKKNEMVLFVKLTKIQQELYESFLQ----SEDLESILKGKRN 577

Query: 1031 FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQG 1090
               G   L +I NHP ++                                          
Sbjct: 578  VLMGVDILRKICNHPDLV------------------------------------------ 595

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
                      + + L+    Y +   SGKM +L ++L +  +   K+L+F Q+   LD++
Sbjct: 596  ----------YRDTLMKRKNYGDPAKSGKMQVLKNLLRLWQSENHKTLLFCQTRQMLDIL 645

Query: 1151 EFYLSKLPRPGKQGKLWKKGK-DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            E +++ L        L   G  ++ R+DG T  S+RQ LV+ FN+  +  V   L++T+ 
Sbjct: 646  EKFVANL-------SLINGGDFNYLRMDGSTPISKRQMLVDAFNQDPDMHV--FLLTTKV 696

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+NL  A+RVII D  WNP+ D+QA  RAWR GQ + +  YRLM  G++EEKIY RQ
Sbjct: 697  GGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKRDITIYRLMTTGSIEEKIYHRQ 756

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQ 1322
            + K  L  +++   +  R     ++  LF  GD +     TA   E G+ S Q
Sbjct: 757  IFKTFLTNKILKDPKQRRFFKANDLHDLFTLGDQDEEGTETAQLFEGGEQSQQ 809


>gi|68483751|ref|XP_714234.1| hypothetical protein CaO19.607 [Candida albicans SC5314]
 gi|46435782|gb|EAK95157.1| hypothetical protein CaO19.607 [Candida albicans SC5314]
 gi|238880196|gb|EEQ43834.1| hypothetical protein CAWG_02085 [Candida albicans WO-1]
          Length = 1055

 Score =  255 bits (651), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 187/653 (28%), Positives = 295/653 (45%), Gaps = 128/653 (19%)

Query: 704  NVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGL 763
            N+   K  E  ++P  I   L  +Q   ++++WE   Q            G I+   MGL
Sbjct: 251  NIADAKLNEKFKLPGDIYPSLFDYQKTCVQWLWELYTQKT----------GGIIGDEMGL 300

Query: 764  GKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV- 822
            GKT Q+I+FL   +    L  +  L+V P  VL+ W  EF +W P    PLR  +L  + 
Sbjct: 301  GKTIQIISFL-AGLHYSGLLDKPVLVVVPATVLNQWVNEFHRWWP----PLRCIILHSIG 355

Query: 823  --------------------------------SRDRRAELLAKWRAKGGVFLIGYTAFRN 850
                                            S+    E++ +   KG V +  Y   R 
Sbjct: 356  SGMNGSVSESKLEEYLESTDPDATQSSLHGIKSQINAQEIVDRVMEKGHVLVTTYVGLR- 414

Query: 851  LSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGS 910
              + KH+    + RE  +        +V DE H I+N  +D +   K++K   RI L+G+
Sbjct: 415  -IYSKHI----LPREWGY--------VVLDEGHKIRNPDSDISLTCKKIKTVNRIILSGT 461

Query: 911  PLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYE 970
            P+QNNL+E + + DFV  G LG+   F+  F  PI  G + NS +  VK   + + +L +
Sbjct: 462  PIQNNLIELWSLFDFVFPGRLGTLPVFQQEFSIPINIGGYANSNNLQVKTAYKCAVVLRD 521

Query: 971  QLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS 1030
             +  ++ R   + V +DLP K   V+ VKL+ +Q+ LY+ FL     + D  S  K +++
Sbjct: 522  LISPYMLRRLKSDVAQDLPKKNEMVLFVKLTKIQQELYESFLQ----SEDLESILKGKRN 577

Query: 1031 FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQG 1090
               G   L +I NHP ++                                          
Sbjct: 578  VLMGVDILRKICNHPDLV------------------------------------------ 595

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
                      + + L+    Y +   SGKM +L ++L +  +   K+L+F Q+   LD++
Sbjct: 596  ----------YRDTLMKRKNYGDPAKSGKMQVLKNLLRLWQSENHKTLLFCQTRQMLDIL 645

Query: 1151 EFYLSKLPRPGKQGKLWKKGK-DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            E +++ L        L   G  ++ R+DG T  S+RQ LV+ FN+  +  V   L++T+ 
Sbjct: 646  EKFVANL-------SLINGGDFNYLRMDGSTPISKRQMLVDAFNQDPDMHV--FLLTTKV 696

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+NL  A+RVII D  WNP+ D+QA  RAWR GQ + +  YRLM  G++EEKIY RQ
Sbjct: 697  GGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKRDITIYRLMTTGSIEEKIYHRQ 756

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQ 1322
            + K  L  +++   +  R     ++  LF  GD +     TA   E G+ S Q
Sbjct: 757  IFKTFLTNKILKDPKQRRFFKANDLHDLFTLGDQDEEGTETAQLFEGGEQSQQ 809


>gi|320587436|gb|EFW99916.1| DNA repair and recombination protein rad54 [Grosmannia clavigera
            kw1407]
          Length = 809

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 192/620 (30%), Positives = 294/620 (47%), Gaps = 95/620 (15%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++   E  R+P  I  +L    + HQ+ G+RFM+  +   I       K  GCI+
Sbjct: 190  ILGIQKKVEGERPRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDA-----KANGCIM 244

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LK 812
            A  MGLGKT Q I  L+T ++ S   G   ++ A++  P +++ NW  E +KW  ++ + 
Sbjct: 245  ADEMGLGKTLQCITLLWTLLKQSPEAGRPSIQKAIVACPSSLVRNWANELVKWLGADAIT 304

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      ED++R  R   +A  RA    V ++ Y   R N+   KH K         
Sbjct: 305  PFAIDGKASKEDLTRQLRQWAIASGRAVTRPVIIVSYETLRLNVEELKHTKI-------- 356

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
                    +++CDE H +KN  + T  AL  ++  RR+ L+G+P+QN+L EY+ ++ F  
Sbjct: 357  -------GLMLCDEGHRLKNGDSQTFSALNNLQVSRRVILSGTPIQNDLSEYFALISFAN 409

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS  EFR RF+ PI  G+  ++  ++ K  +     L   +  F+ R   +++ K 
Sbjct: 410  PDLLGSRLEFRRRFELPILRGRDADAGPDERKKGDACLAELLAVVNKFIIRRTNDILSKY 469

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   L+P Q  LY  F+   D+      + S              L ++ NH
Sbjct: 470  LPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGKGSQP------LKAINILKKLCNH 523

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L L  D     R   +D  + E                   +G++ +    K W   
Sbjct: 524  PDLLNLADDLPGSERCCPDDYVAKEA------------------RGRDRE---VKPW--- 559

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM++L  +L  + +   DK ++ S    TLDL E    +L R    
Sbjct: 560  -----------YSGKMMVLERMLARIRAETNDKIVLISNYTSTLDLFE----RLCRNRAY 604

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    S+RQKLV+RFN+P        L+S++AG  G+NL  ANR++
Sbjct: 605  GCL--------RLDGTMNVSKRQKLVDRFNDPDGSEF-IFLLSSKAGGCGLNLIGANRLV 655

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            + D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L+  VVD  
Sbjct: 656  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSTCVVDAA 715

Query: 1284 Q---VHRTISKEEMLHLFEF 1300
                V R  S + +  LF+F
Sbjct: 716  AGDDVERHFSLDSLKELFQF 735


>gi|254583686|ref|XP_002497411.1| ZYRO0F04906p [Zygosaccharomyces rouxii]
 gi|238940304|emb|CAR28478.1| ZYRO0F04906p [Zygosaccharomyces rouxii]
          Length = 848

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 194/622 (31%), Positives = 297/622 (47%), Gaps = 103/622 (16%)

Query: 716  IPSSISAKL----KAHQVVGIRFMWENIIQSIRK-------VKSG--------DKG-LGC 755
            IP  I  KL    + HQV G+RF++  +   + K       V  G        ++G  GC
Sbjct: 225  IPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDKELVTKGVENTTQEVNRGAYGC 284

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSEL 811
            I+A  MGLGKT Q IA ++T +R    G R     +IV P ++++NW  E  KW  P  L
Sbjct: 285  IMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELDKWLGPGTL 344

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
             PL +        D +   L      G +        RN+     +      R     L+
Sbjct: 345  SPLAI--------DGKKSSLNNGSVSGAIHSWAQAQGRNIVKPVLIISYETLRRNTDQLK 396

Query: 872  D-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
            +    +++ DE H +KN  + T  +L  + C RR+ L+G+P+QN+L EY+ +++F   G 
Sbjct: 397  NCNVGLMLADEGHRLKNADSLTFTSLDSIDCSRRVILSGTPIQNDLSEYFALLNFSNPGL 456

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 990
            LGS  EFR  F+ PI   +  ++T EDV+   ++   L   +  F+ R   +++ K LP 
Sbjct: 457  LGSRSEFRKNFEIPILKSRDADATDEDVRKGQEKLSQLSYVVSKFIIRRTNDILAKYLPC 516

Query: 991  KTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF--FAGYQALAQIW------ 1042
            K   VI V L+P QR LYK+           V +  ++K      G Q L  I       
Sbjct: 517  KYEHVIFVNLTPFQRELYKK----------NVESRDVKKLVKGVGGTQPLKAIGLLKKLC 566

Query: 1043 NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
            NHP ++   ++      E+ ++ S  ++ ++N     K +++                  
Sbjct: 567  NHPDLVDFNEEI-----ENLDEISIPDDYEWN----SKRKDL------------------ 599

Query: 1103 NDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG 1161
                      ++ YS K  +L   L  + S   DK ++ S    TLDLIE    KL R  
Sbjct: 600  ----------QVKYSSKFSILERFLAKIRSESDDKIVIISNYTQTLDLIE----KLCRQK 645

Query: 1162 KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
            + G +        RLDG    ++RQKLV+RFN+P  +     L+S++AG  GINL  ANR
Sbjct: 646  RYGSV--------RLDGTMGINKRQKLVDRFNDPEGQEF-VFLLSSKAGGCGINLIGANR 696

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            +I++D  WNP  D QA+ R WR GQ K  F YR ++ G++EEKIY+RQ  K  L++ VVD
Sbjct: 697  LILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGSIEEKIYQRQSMKLSLSSCVVD 756

Query: 1282 -RQQVHRTISKEEMLHLFEFGD 1302
             ++ V R  S + +  LF+F D
Sbjct: 757  AKEDVERLFSADNLKQLFQFND 778


>gi|149239498|ref|XP_001525625.1| DNA repair and recombination protein RAD54 [Lodderomyces elongisporus
            NRRL YB-4239]
 gi|146451118|gb|EDK45374.1| DNA repair and recombination protein RAD54 [Lodderomyces elongisporus
            NRRL YB-4239]
          Length = 875

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 194/633 (30%), Positives = 306/633 (48%), Gaps = 99/633 (15%)

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVK 747
            E+LG      IV    E+  +   +P  I  KL    + HQ+ G++F++        +  
Sbjct: 252  EILG------IVTNPEEQMRKFPNVPVVIDPKLAKILRPHQIAGVKFLY--------RCT 297

Query: 748  SG---DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQ 801
            +G    +  GCI+A  MGLGKT Q +  ++T +R    G RT    +IV P +++ NW  
Sbjct: 298  AGLQDPRAKGCIMADEMGLGKTLQCLTLMWTLLRQSPRGKRTIEKCIIVCPSSLVRNWAN 357

Query: 802  EFMKWR-PSELKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFG 854
            E +KW     L PL V      S D     L +W    G      V +I Y   R     
Sbjct: 358  EIVKWLGEGVLTPLAVDGKSTKSNDL-GLALQQWSTAQGRNIVRPVLIISYETLR----- 411

Query: 855  KHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN 914
            ++V D+    E+         +++ DE H +KN  + T  AL  ++C+RR+ L+G+P+QN
Sbjct: 412  RNV-DKLAGTEV--------GLMLADEGHRLKNGDSLTFTALNSLRCERRVILSGTPIQN 462

Query: 915  NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG 974
            +L EY+ +++F   G+LG+ ++FR  F+N I  G+  ++T ++ +  +Q+   L + +  
Sbjct: 463  DLSEYFSLLNFANPGYLGTRNDFRRNFENAILRGRDADATDKEREKGDQKLSELSQLVSK 522

Query: 975  FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSN--EKIRKSFF 1032
            F+ R   +++ K LP K  +V+   L+P+Q++LY  F+     T+  +    + I     
Sbjct: 523  FIIRRTNDILSKYLPVKYEYVLFTGLAPMQKKLYHHFI-----TSPEIKKLLKGIGSQPL 577

Query: 1033 AGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKN 1092
                 L ++ NHP +L L  D      E  +D   ++ +      G   RN         
Sbjct: 578  KAIGMLKKLCNHPDLLNLPDDI-----EGCDDLIPEDYVSSIHGHGGGGRNRE------- 625

Query: 1093 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIE 1151
                  + W              +SGK  +L   L  +     DK ++ S    TLDLIE
Sbjct: 626  -----IQTW--------------FSGKFQVLERFLHKIKRETNDKIVLISNYTQTLDLIE 666

Query: 1152 FYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGS 1211
                K+ R  K G L        RLDG    ++RQKLV+RFN+P        L+S++AG 
Sbjct: 667  ----KMCRYKKYGAL--------RLDGTMNINKRQKLVDRFNDPDGAEF-IFLLSSKAGG 713

Query: 1212 LGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVT 1271
             GINL  ANR++++D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  
Sbjct: 714  CGINLIGANRLVLIDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSM 773

Query: 1272 KEGLAARVVD-RQQVHRTISKEEMLHLFEFGDD 1303
            K  L++ VVD ++ V R  S + +  LF F  D
Sbjct: 774  KMSLSSCVVDEKEDVERLFSADNLRQLFLFQPD 806


>gi|62738897|pdb|1Z3I|X Chain X, Structure Of The Swi2SNF2 CHROMATIN REMODELING DOMAIN OF
            EUKARYOTIC Rad54
          Length = 644

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 187/631 (29%), Positives = 311/631 (49%), Gaps = 93/631 (14%)

Query: 688  GASIEVLGDAITGY-IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKV 746
            GA +     AI+ + ++   +EK    V +   +S  L+ HQ  G++F+W+ +  + R++
Sbjct: 19   GALVLYEPPAISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQREGVKFLWDCV--TGRRI 76

Query: 747  KSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEF 803
            ++     GCI+A  MGLGKT Q I  ++T ++        +   ++V+P +++ NW  E 
Sbjct: 77   ENS---YGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYNEV 133

Query: 804  MKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHV 857
             KW    ++P+ +   +  S+D     L  + ++ G      + +I Y  FR        
Sbjct: 134  GKWLGGRVQPVAI---DGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFR-------- 182

Query: 858  KDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLM 917
                +  E+ H  + G  +++CDE H +KN+   T  AL  +  QRR+ ++G+P+QN+L+
Sbjct: 183  ----LHAEVLHKGKVG--LVICDEGHRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLL 236

Query: 918  EYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQ 977
            EY+ +V FV  G LG++ EF+ RF+ PI  G+  +++ +D     Q+   L   +   + 
Sbjct: 237  EYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQKLQELISIVNRCLI 296

Query: 978  RMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA 1037
            R   +++ K LP K   V+   L+PLQ+ LYK FL       + +   KI  S  +   +
Sbjct: 297  RRTSDILSKYLPVKIEQVVCCNLTPLQKELYKLFLK-QAKPVESLQTGKISVSSLSSITS 355

Query: 1038 LAQIWNHPGILQ---LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDD 1094
            L ++ NHP ++    LT ++G+           D  +D                      
Sbjct: 356  LKKLCNHPALIYEKCLTGEEGF-----------DGALD---------------------- 382

Query: 1095 GFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFY 1153
              F +++    +      E   SGKM++L  IL M  +   DK ++ S    TLDL E  
Sbjct: 383  -LFPQNYSTKAV------EPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFE-- 433

Query: 1154 LSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
                       KL +  +  Y RLDG     +R K+VERFN P +      ++S++AG  
Sbjct: 434  -----------KLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEF-IFMLSSKAGGC 481

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  + YRL++ GT+EEKI +RQ  K
Sbjct: 482  GLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHK 541

Query: 1273 EGLAARVVDRQQ-VHRTISKEEMLHLFEFGD 1302
            + L++ VVD +Q V R  S  E+  LF   +
Sbjct: 542  KALSSCVVDEEQDVERHFSLGELRELFSLNE 572


>gi|347827598|emb|CCD43295.1| similar to DNA repair and recombination protein RAD54 [Botryotinia
            fuckeliana]
          Length = 862

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 193/646 (29%), Positives = 308/646 (47%), Gaps = 98/646 (15%)

Query: 679  VTLDGDLSAGASIEVLGDAITGYIVNVVR-EKGEEAVRIPSSISAKLKAHQVVGIRFMWE 737
            + LD  L+  +  E+LG      I  VV  E+ +  V I   ++  L+ HQ+ G++FM+ 
Sbjct: 233  LKLDAPLAHKSLAEILG------IKKVVEGERPKVPVVIDPRLAKVLRPHQIEGVKFMYR 286

Query: 738  NIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLGLRT---ALIVTPV 793
             +   +      D+  GCI+A  MGLGKT Q I  ++T ++ S + G  T   A+I  P 
Sbjct: 287  CVTGMV-----DDRANGCIMADEMGLGKTLQCITLMWTMLKQSTDAGKPTINKAIIACPS 341

Query: 794  NVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYT 846
            +++ NW  E +KW  P  ++P  +      S++   + L +W    G      V ++ Y 
Sbjct: 342  SLVKNWANELVKWLGPDAIQPFAID--GKASKEELIQQLRQWAIASGRSITRPVIIVSYE 399

Query: 847  AFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIA 906
              R               E+ H  Q G  +++CDE H +KN  + T  AL  +   RR+ 
Sbjct: 400  TLRL-----------YVDELKHT-QIG--LMLCDEGHRLKNGDSQTFVALNSLNVTRRVI 445

Query: 907  LTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSH 966
            L+G+P+QN+L EY+ +V F   G LG+  EFR +++ PI+ G+    + +D +  ++   
Sbjct: 446  LSGTPIQNDLTEYFSLVSFANPGLLGTRMEFRKKYELPIQRGRDAAGSDKDRQKGDECIK 505

Query: 967  ILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVS 1023
             L   +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   D+      + S
Sbjct: 506  ELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQLDLYNHFITSPDIKALLRGKGS 565

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 1083
                          L ++ NHP +L L++D     +   ED    +              
Sbjct: 566  QP------LKAIGMLKKLCNHPDLLNLSEDLPGCEQYWPEDYVPKDG------------- 606

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQ 1142
                 +G++ D    K W              YSGKM +L  +L  +  +  DK ++ S 
Sbjct: 607  -----RGRDRD---IKPW--------------YSGKMQVLDRMLARIRQDTNDKIVLISN 644

Query: 1143 SIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKC 1202
               TLD+ +    KL R    G L        RLDG    ++RQKLV++FN+P  +    
Sbjct: 645  YTQTLDMFD----KLCRSRGYGSL--------RLDGTMNVTKRQKLVDKFNDPDGQEF-V 691

Query: 1203 TLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTME 1262
             L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+E
Sbjct: 692  FLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIE 751

Query: 1263 EKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            EKI++RQ  K+ L++ VVD  + V R  S + +  LF++  D   D
Sbjct: 752  EKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRKDTTSD 797


>gi|451853165|gb|EMD66459.1| hypothetical protein COCSADRAFT_298475 [Cochliobolus sativus ND90Pr]
          Length = 812

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 184/628 (29%), Positives = 294/628 (46%), Gaps = 99/628 (15%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++   E  R+P  I  +L    + HQV G++F++      I       K  GCI+
Sbjct: 190  ILGLKKKVDNERPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMI-----DPKANGCIM 244

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q I  ++T ++ S + G   ++  +I  P +++ NW  E +KW   +   
Sbjct: 245  ADEMGLGKTLQCITLMWTLLKQSPDAGKSTIQKCVIACPSSLVRNWANELVKWLGKDA-- 302

Query: 814  LRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFRNL--SFGKHVKDRNMAR 864
            +  F ++   S++   + + +W    G      V ++ Y   R     FG          
Sbjct: 303  VTPFAIDGKASKEELIQQIRQWSIASGRAVVRPVLIVSYETLRLYVDEFG---------- 352

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                  Q    +++CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ +++
Sbjct: 353  ------QTPIGLMLCDEGHRLKNGDSLTFTALNSLNVQRRVILSGTPIQNDLSEYFALLN 406

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F   G+LG+  EFR +F+ PI  G+  N T  DV+   +R   L   +  F+ R   +++
Sbjct: 407  FANPGYLGTRMEFRKQFEIPILKGRDANGTDADVQKGTERLTELLGLVNKFIIRRTNDIL 466

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
             K LP K   V+   L+P Q+ LY  F+   D+      + S              L ++
Sbjct: 467  SKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQSLLRGKGSQP------LKVIGMLKKL 520

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NHP +L L +D   P  ED                             K  + F QKD 
Sbjct: 521  CNHPDLLNLPED--LPGCED-----------------------------KLPEDFVQKDA 549

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                     +    YSGKM +L  +L  + +   DK ++ S    TLD+           
Sbjct: 550  RGRDREVKVW----YSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCR----- 600

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
                    +G   +RLDG    S+RQKLV++FN+P +      L+S++AG  G+NL  AN
Sbjct: 601  -------SRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEF-VFLLSSKAGGCGLNLIGAN 652

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+++ D  WNP  D QA+ R WR GQ K  F YR +  GT+EEK+++RQ  K+ L++ VV
Sbjct: 653  RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVV 712

Query: 1281 DR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            D  + V R  S + +  LF++ D+   D
Sbjct: 713  DSAEDVERHFSLDSLRELFQYRDNTTSD 740


>gi|342185668|emb|CCC95153.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 1029

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 185/602 (30%), Positives = 298/602 (49%), Gaps = 89/602 (14%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLG---CILAHTMGLGKTFQV 769
            +V +   I  KL+ HQ VG++F+++ I        +G++  G    ILA  MGLGKT Q 
Sbjct: 353  SVVVDPVIGDKLRPHQRVGVKFLFDCI--------TGERMPGYHGAILADEMGLGKTIQT 404

Query: 770  IAFLYTAMRSVNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
            +A +YT +R    G  TA   LIVTP +++ NW  EF KW    +  ++ F + + S  +
Sbjct: 405  VATVYTCLRQGKYGNPTARKCLIVTPSSLVKNWCNEFDKWL--GVGAVKYFAISE-STPK 461

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
               +++++  +G V +I Y   R     K++   +  + +        +++VCDE H +K
Sbjct: 462  GDRIISRFDGEGDVLVISYDQLR-----KYITRISTLKSV--------ELVVCDEGHRLK 508

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            N    TT+A+  +  + RI L+G+P+QN+L E++ MV FV  G LGS   F   F+ P+ 
Sbjct: 509  NAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVT 568

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
             G+  +       +   R+H L    + F+ R   ++ +  LPPK    + V+L   Q  
Sbjct: 569  LGRDPDCPEYLRMLGADRAHYLSNLTQKFILRRTQSINESYLPPKVDLTVFVRLGVKQET 628

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS 1066
             YK+  +L       V N +          AL ++ NH                      
Sbjct: 629  AYKKVAEL-------VENSQCTPLVL--ISALRKLCNH---------------------- 657

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
               ++ +  V+     N N    G        K +    L E    ++ +   + L+LD 
Sbjct: 658  --MDLFHEAVLNSNKNNDN----GSLPTSLIPKGYKVGTLSEEVGSKMRF---VSLMLDE 708

Query: 1127 LTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQ 1186
            L    +  DK ++ S    TLD+I   L K+           K   +++LDG     +RQ
Sbjct: 709  LQKNGDH-DKLVIVSNFTQTLDVIA-SLCKM-----------KKISFFQLDGSMPIKKRQ 755

Query: 1187 KLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
            ++V+RFN P++K +   L+S++AG +G+NL  ANR+I+ D  WNP  D QA+ R WR GQ
Sbjct: 756  EVVDRFNTPVSKEI-VFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQ 814

Query: 1247 TKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ---QVHRTISKEEMLHLFEFGDD 1303
             K VF YRL++ G++EEKIY+RQV+K+GL+A VVD Q   + H T+  +E+  LF +  D
Sbjct: 815  KKRVFIYRLLSTGSIEEKIYQRQVSKQGLSANVVDMQSDSKQHFTL--DELRSLFRYRSD 872

Query: 1304 EN 1305
             N
Sbjct: 873  TN 874


>gi|396491459|ref|XP_003843573.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans
            JN3]
 gi|312220152|emb|CBY00094.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans
            JN3]
          Length = 1224

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 182/609 (29%), Positives = 288/609 (47%), Gaps = 101/609 (16%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
              RIP  I   L  +Q  G++++WE   Q++          G I+   MGLGKT Q I+F
Sbjct: 404  GFRIPGDIYPALFDYQKTGVQWLWELYSQNV----------GGIIGDEMGLGKTIQAISF 453

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRD 825
            +   +    L  +  ++V P  V+  W  EF +W P+    LRV +L        D  R+
Sbjct: 454  V-AGLHYSKLLTKPVIVVCPATVMKQWVNEFHRWWPA----LRVSILHTSGSGMLDTQRE 508

Query: 826  RRAELLAKWRAKGG--VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV----- 878
             R E   + R+ G     L G          K  +D ++       LQ   + L+     
Sbjct: 509  DRMERELELRSYGDYDTTLTGAGKAAKKILEKVKRDGHVLVTTYSGLQTYSEFLIPTEWE 568

Query: 879  ---CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
                DE H I+N     T   K+++   RI L+G+P+QNNL E + + DFV    LG+  
Sbjct: 569  CAILDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLV 628

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVF 994
             FRN+F+ PI+ G + N+++ + +   + +  L + +  ++ QR  ++V   DLP K   
Sbjct: 629  NFRNQFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKVDVAT-DLPQKKEQ 687

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
            V+  KL+  QR  Y+ FL     +ND  S    +++   G   L ++ NHP    LT+ K
Sbjct: 688  VLFCKLTRQQRAAYEGFL----ASNDMKSITDGKRNMLFGVDYLRKVCNHP---DLTEHK 740

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                                 ++ +KP                           + Y   
Sbjct: 741  ---------------------ILSKKP--------------------------GYDYGAP 753

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
            + SGKM ++ ++L++    G K+L+F+Q    LD+++ ++S LP           G +W 
Sbjct: 754  NRSGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFVSHLP-----------GINWR 802

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            R+DG T   ERQ LV+ FN   N  +   L++T+ G LG+NL  ANRVII D  WNP+ D
Sbjct: 803  RMDGETPIKERQNLVDEFNN--NPDLDVFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTD 860

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            +QA  R+WR GQ + V  YRLM+ GT+EEKIY RQ+ K+ L  +V+   +  +T    ++
Sbjct: 861  IQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQTFQMSDL 920

Query: 1295 LHLFEFGDD 1303
              LF  G++
Sbjct: 921  HDLFTLGEN 929


>gi|242021397|ref|XP_002431131.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212516380|gb|EEB18393.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 745

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 185/605 (30%), Positives = 304/605 (50%), Gaps = 93/605 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   +S  L+ HQ  G++FM++     +  VK  +   GCI+A  MGLGKT Q I  +
Sbjct: 139  VVVDPMLSNVLRPHQREGVKFMYD----CVTGVKI-ENAYGCIMADEMGLGKTLQCITLM 193

Query: 774  YTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV--FMLEDVSRDRRA 828
            +T ++        +  A++V P +++ NW  E  KW    +  L +     +D+ R+ ++
Sbjct: 194  WTLLKQGPDCKPLIEKAIVVAPSSLVKNWYNEINKWLKGRVNALAIDSGSKDDIDRNLQS 253

Query: 829  EL-LAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
             +     R    + +I Y  FR      HVK       + H  + G  +++CDE H +KN
Sbjct: 254  FMNTYSRRPVNPILIISYETFR-----LHVK-------VLHKGEVG--LVLCDEGHRLKN 299

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
                T QAL  +  +RR+ L+G+P+QN+L+EY+ ++ FV +G LG++ EFR +F+ PI  
Sbjct: 300  HENQTYQALMGLNAKRRVLLSGTPIQNDLLEYFSLIHFVNQGILGTAAEFRKKFEIPILR 359

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN----VVKKDLPPKTVFVITVKLSPL 1003
            GQ  NST E+ K    +     EQ+   V R  +     ++ K LP KT  VI + L+ L
Sbjct: 360  GQDANSTIEERK----KGQECLEQMAALVNRCLIRRTAALLSKYLPVKTEQVICITLTGL 415

Query: 1004 QRRLYKRFLDLHGFTN----DRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR 1059
            Q++LY+ F+           ++ S + +  +  +    L ++ NHP ++           
Sbjct: 416  QKQLYEDFIASDALKKTVREEKNSKKGMSLTALSAITTLKKLCNHPDLVY---------- 465

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--DYS 1117
                     EN+                   K  +GF  ++    L  ++  K +  + S
Sbjct: 466  ---------ENI------------------MKQTEGF--ENALKYLPEKYDIKNVRPEMS 496

Query: 1118 GKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            GK++ L  +L +  +   DK ++ S    TLDL E    KL R         +   + RL
Sbjct: 497  GKLMFLDTLLALIKATTNDKIVLVSNYTQTLDLFE----KLSR--------FRNYQYVRL 544

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG     +R K+VE+FN+P +K     ++S++AG  G+NL  ANR+++ D  WNP  D Q
Sbjct: 545  DGSMTIKKRGKVVEKFNDPESKDF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 603

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEML 1295
            A+ R WR GQ KP F YRL++ GT+EEKI++RQ  K+ L++ VVD ++ V R  S++E+ 
Sbjct: 604  AMARVWRDGQKKPCFIYRLLSTGTIEEKIFQRQAHKKALSSTVVDNEEDVARHFSRDELR 663

Query: 1296 HLFEF 1300
             LF+ 
Sbjct: 664  DLFKL 668


>gi|452985646|gb|EME85402.1| hypothetical protein MYCFIDRAFT_213848 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 966

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 179/595 (30%), Positives = 288/595 (48%), Gaps = 89/595 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            ++  L+ HQ  G+ F++E ++     +K  D G G ILA  MGLGKT Q IA L+T ++ 
Sbjct: 282  LTKHLREHQREGVAFLYECVM----GMKDYD-GEGAILADEMGLGKTLQTIALLWTLLKQ 336

Query: 780  VNLG-----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
              +      ++ ALIV PV+++ NW+ EF KW  SE   + VF+ +D     R     K 
Sbjct: 337  NPVFEDAPVIKKALIVCPVSLIKNWRNEFRKWLGSER--IGVFVADD--NKMRLTDFTKG 392

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP--DILVCDEAHMIKNTRADT 892
            RA   V +IGY           VKD+         LQ G   DI++CDE H +K      
Sbjct: 393  RAYH-VMIIGYEKLTK------VKDQ---------LQGGTGIDIVICDEGHRLKTASNKA 436

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
              A+K +   RRI L+G+P+QN+L E+Y MVDFV    +     F+  F+ PI   +   
Sbjct: 437  AGAIKSLNTDRRIILSGTPIQNDLSEFYTMVDFVNPNIMSKYTTFKKEFETPILKSRQPG 496

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ++  D++    RS  L +    F+ R    ++ K LPPKT +V+  + +  Q+ +Y+  +
Sbjct: 497  ASQSDLEKGEARSAQLADLTGKFILRRTAEILNKYLPPKTEYVVFCRPTEAQKTVYRMIV 556

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDKGYPSREDAEDSSSDENM 1071
                F    ++    +         L ++ N P +L Q T DK             DE  
Sbjct: 557  SSQAF----MAAMNTKAVVLELIMILKKVCNSPNLLIQKTGDK-------------DEQT 599

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE-HTYKELDYSGKMVLLLDILTMC 1130
              + +  + P+++   L      G  Q   ++ LLH+ HT+ +                 
Sbjct: 600  KRSDLFEDVPKHL---LGSAGSSGKLQ--VFDSLLHQIHTHTD----------------- 637

Query: 1131 SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVE 1190
                +K +V S    T+D++   L+ +               + RLDG T +++RQ++V+
Sbjct: 638  ----EKVVVVSNYTSTMDVLGRLLTSM------------DMSFLRLDGSTPTNKRQEIVD 681

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
             FN    K+    L+S +AG +G+NL  A+R+++ D  WNP  DLQA+ R  R GQ +P 
Sbjct: 682  HFNRWPRKKAFVLLLSAKAGGVGLNLIGASRLVMFDMDWNPATDLQAMARVHRDGQKRPC 741

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            F YRL+  G ++EKI++RQV+K GLA  +VD +      ++ E+  LF   + E+
Sbjct: 742  FIYRLLTQGALDEKIFQRQVSKVGLADSIVDGKAAASGFTQAELRDLFTLDEGED 796


>gi|300794189|ref|NP_001179884.1| DNA repair and recombination protein RAD54B [Bos taurus]
 gi|296480441|tpg|DAA22556.1| TPA: RAD54 homolog B [Bos taurus]
          Length = 909

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 190/602 (31%), Positives = 302/602 (50%), Gaps = 91/602 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPHLVYYLRPHQKEGITFLYECVM-GMRV----NGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW   E   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPIVKKTLIVTPGSLVNNWKKEFQKWLGIER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K+VK                D+L+CDE H +KN+
Sbjct: 396  EFTK-SPFYSVLIISYEMLLRSLDQIKNVKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  TIKTTTALISLSCEKRIILTGTPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIIS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  QR+  L      F+ R    V+ + LPPK   V+  +   LQ  LY
Sbjct: 500  RQPSASEEERELGEQRAAELTCLTGLFILRRTQEVINQYLPPKIENVVFCRPGALQIALY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +         S      AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQAVRFCLQGLLEN--------TSHLICIGALKKLCNHPCLL-------FGSIKE 604

Query: 1062 AEDSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKM 1120
             E +S+ DE+ + N+  G     MN F    N   F +++                SGK+
Sbjct: 605  KESNSTWDESEERNLYEGL----MNVFPADYNPIMFTEEE----------------SGKL 644

Query: 1121 VLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
             +L  +L +   +   +K ++ S    TLD++            Q    + G  + RLDG
Sbjct: 645  QVLSKLLAVIRELRPAEKVVLVSNYTRTLDIL------------QEVCKRHGYAYTRLDG 692

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
            +T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+
Sbjct: 693  QTPISQRQQIVDGFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAM 751

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLH 1296
             R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL+  VVD  +   H   S EE+ +
Sbjct: 752  SRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLSKTSDHIQFSVEELKN 811

Query: 1297 LF 1298
            LF
Sbjct: 812  LF 813


>gi|407929790|gb|EKG22600.1| SNF2-related protein [Macrophomina phaseolina MS6]
          Length = 831

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 186/622 (29%), Positives = 302/622 (48%), Gaps = 95/622 (15%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   R+P  I  +L    + HQV G++F++      +       K  GCI+A  M
Sbjct: 216  LKKKVEGRPRVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLV-----DPKANGCIMADEM 270

Query: 762  GLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF 817
            GLGKT Q IA ++T +R S + G   ++  +I  P +++ NW  E +KW   +   +  F
Sbjct: 271  GLGKTLQCIALMWTLLRQSPDAGKPTIQKCVIACPSSLVKNWANELVKWLGKDA--INPF 328

Query: 818  MLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHAL 870
             ++   S++   + L +W    G      V ++ Y   R   +   +K   +        
Sbjct: 329  AVDGKASKEELIQQLRQWSIASGRAVVRPVLIVSYETLR--LYVDELKSTPIG------- 379

Query: 871  QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
                 +L+CDE H +KN  + T  AL  +  Q+R+ L+G+P+QN+L EY+ +++F    +
Sbjct: 380  -----LLLCDEGHRLKNDESLTFTALNNLNVQKRVILSGTPIQNDLSEYFALLNFANPNY 434

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 990
            LG+ ++FR R++ PI  G+  + T ED K+ ++R   L   +  F+ R   +++ K LP 
Sbjct: 435  LGTKNDFRKRYELPILRGRDADGTDEDRKLGDERLSELLTLVNKFIIRRTNDILSKYLPR 494

Query: 991  KTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGI 1047
            K   V+   L+P QR LY  F+   ++      + S              L ++ NHP +
Sbjct: 495  KYEHVVFCNLAPFQRDLYNLFIKSPEIQQLLRGKGSQP------LKAINILKKLCNHPDL 548

Query: 1048 LQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
            L L  D        +E    D+ +         P++     +G++ D    K W      
Sbjct: 549  LDLPGD-----LPGSESCFPDDFV---------PKDA----RGRDRD---VKSW------ 581

Query: 1108 EHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1166
                    YSGKM +L  +L  +  +  DK ++ S    TLD+ E    KL R    G L
Sbjct: 582  --------YSGKMAVLDRMLARIRQDTNDKIVLISNYTQTLDVFE----KLCRSRSYGCL 629

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
                    RLDG    ++RQKLV++FN+P        L+S++AG  GINL  ANR+++ D
Sbjct: 630  --------RLDGTMNVNKRQKLVDKFNDPEGPEF-VFLLSSKAGGCGINLIGANRLVLFD 680

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQV 1285
              WNP  D QA+ R WR GQ K  F YR +  GT+EEKI++RQ  K+ L++ VVD  + V
Sbjct: 681  PDWNPAADQQALARVWRDGQKKDCFVYRFIGTGTIEEKIFQRQSHKQSLSSCVVDSAEDV 740

Query: 1286 HRTISKEEMLHLFEFGDDENPD 1307
             R  S + +  LF++  +   D
Sbjct: 741  ERHFSLDSLRELFQYQPNTTSD 762


>gi|343429051|emb|CBQ72625.1| probable RAD54-DNA-dependent ATPase of the Snf2p family [Sporisorium
            reilianum SRZ2]
          Length = 871

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 191/622 (30%), Positives = 298/622 (47%), Gaps = 105/622 (16%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + + K +E  ++P  I  +L    + HQV G++F++      +      +   GCI+
Sbjct: 261  ILGLNKNKTKEIEKLPVVIDPRLGKVLRPHQVEGVKFLYRCTTGLVV-----ENAFGCIM 315

Query: 758  AHTMGLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q I  ++T ++   +  +T +    IV P +++ NW  E +KW  +   P
Sbjct: 316  ADEMGLGKTLQCITLMWTLLKQSPIPKKTTIDKCIIVCPSSLVRNWANELVKWLGAA-AP 374

Query: 814  LRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREIC 867
              + +   +S+D   E   +W    G      V ++ Y   RNL            +E  
Sbjct: 375  GNLALDGKLSKDEMIEATRRWCNASGRAITQPVMIVSYETLRNL------------QEEL 422

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
               + G  +L+CDE H +KN  + T QAL Q+K +RR+ L+G+P+QN+L EY+ +++F  
Sbjct: 423  GNTEVG--LLLCDEGHRLKNADSLTFQALTQIKVRRRVILSGTPIQNDLSEYFALLNFAN 480

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS  EFR  F+  I  G+   +T +  +  N++   L   +  F+ R   +++ K 
Sbjct: 481  PELLGSRVEFRKNFEIAILKGRDAEATDKQQQEANEKLSQLSALVSRFIIRRTNDLLSKY 540

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA-GYQALAQIW---- 1042
            LP K   V+  K+SP Q  LY+ F          + + +I+K     G Q L  I     
Sbjct: 541  LPVKYEHVVFCKMSPFQLDLYRLF----------IRSPEIKKLLRGTGSQPLKAIGILKK 590

Query: 1043 --NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD 1100
              NHP +L L  D      E +E+   +         G  PR+                 
Sbjct: 591  LCNHPDLLDLPSD-----LEGSEEYFPE---------GYTPRD----------------- 619

Query: 1101 WWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
                        EL  SGKM++L   L T+ +   DK ++ S    TLD+ E    ++ R
Sbjct: 620  ------RRQVNPEL--SGKMMVLQRFLETIRATTNDKIVLISNYTQTLDVFE----RMCR 667

Query: 1160 PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
              + G         +RLDG    ++RQKLV+RFN+P  K     L+S++AG  G+NL  A
Sbjct: 668  ANRWG--------MFRLDGTMTINKRQKLVDRFNDPEGKEF-IFLLSSKAGGCGLNLIGA 718

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NR+++ D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI +RQ  K+ L++ V
Sbjct: 719  NRLVLFDPDWNPASDQQALARVWRDGQKKSCFVYRFIATGSIEEKILQRQSHKQSLSSCV 778

Query: 1280 VDR-QQVHRTISKEEMLHLFEF 1300
            VD  Q   R  S E++  LF F
Sbjct: 779  VDEAQDAARHFSGEDLRALFTF 800


>gi|448113515|ref|XP_004202370.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
 gi|359465359|emb|CCE89064.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
          Length = 1117

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 180/615 (29%), Positives = 284/615 (46%), Gaps = 93/615 (15%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            E+ R+P  I   L  +Q   ++++WE   Q            G I+   MGLGKT Q+I+
Sbjct: 305  ESFRLPGDIYPSLFDYQKTCVQWLWELYTQKT----------GGIIGDEMGLGKTIQIIS 354

Query: 772  FLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELL 831
            F+   +    L     LIV P  VL+ W  EF +W P    PLR  +L  +       L+
Sbjct: 355  FI-AGLHYSKLLEDPVLIVVPATVLNQWVNEFHRWWP----PLRCVILHSIGSGMNKALV 409

Query: 832  AKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC------------ 879
            +K      +         N S  K  ++   A+EI  ++     IL+             
Sbjct: 410  SKEEKMEELLENADPFAVNKSSLKSYENELKAKEIVDSVFQKGHILITTYVGLRIYSKYI 469

Query: 880  ----------DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
                      DE H I+N  +D +   KQ+K   R+ L+G+P+QNNL+E + + DFV  G
Sbjct: 470  LPRKWGYAILDEGHKIRNPDSDVSLTCKQIKTYNRVILSGTPIQNNLIELWSLFDFVFPG 529

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP 989
             LG+   F+ +F  PI  G + N+++  V+   + + IL + +  ++ R   + V +DLP
Sbjct: 530  RLGTLPVFQQQFAVPINMGGYANASNVQVQTGYKCAVILRDLISPYLLRRLKSDVARDLP 589

Query: 990  PKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ 1049
             K   V+ VKL+  Q++LY++F+D    + D  +  K +++   G   L +I NHP ++ 
Sbjct: 590  KKNEMVLFVKLTEYQQQLYEKFID----SEDVSAILKGKRNVLMGVDILRKICNHPDLI- 644

Query: 1050 LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEH 1109
                       D +  S   N +Y       PR                           
Sbjct: 645  -----------DRDILSHRRNYNYG-----DPRK-------------------------- 662

Query: 1110 TYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKK 1169
                   SGK+ +L ++L +    G ++L+F Q+   LD++E ++  L     +G     
Sbjct: 663  -------SGKLQVLKNLLQLWKKEGHRTLLFCQTRQMLDILEKFVGNLKSINDEGDDIDG 715

Query: 1170 GKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
              ++ R+DG T  + RQ LV+ FN   N      L++T+ G LGINL  A+RVII D  W
Sbjct: 716  KFNYLRMDGSTPIAVRQSLVDTFNN--NNYCHVFLLTTKVGGLGINLTGADRVIIYDPDW 773

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTI 1289
            NP+ D+QA  RAWR GQ K +  YRLM  G++EEKIY RQ+ K  L  +++   +  R  
Sbjct: 774  NPSTDIQARERAWRLGQKKDITIYRLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQRRFF 833

Query: 1290 SKEEMLHLFEFGDDE 1304
               ++  LF  GD E
Sbjct: 834  RMNDLHDLFSLGDPE 848


>gi|431917856|gb|ELK17087.1| DNA repair and recombination protein RAD54B [Pteropus alecto]
          Length = 910

 Score =  254 bits (649), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 191/604 (31%), Positives = 304/604 (50%), Gaps = 87/604 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++    +V S     G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPHLVYHLRPHQKEGIIFLYECVMG--MRVNSR---CGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   ++++    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIYT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   KH+K                D+L+CDE H +KN+
Sbjct: 396  EFIK-SPFYSVLIISYEMLLRSLDQIKHIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  TIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIIIS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F  R    V+ K LPPK   V+  +   LQ  LY
Sbjct: 500  RQPSASEEEKELGERRAAELTCLTGLFFLRRTQEVINKYLPPKIENVVFCQPGALQIELY 559

Query: 1009 KRFLDLHGFTNDRVSNEKIRKS--FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS 1066
            ++ L+       R   E + ++        AL ++ NHP +L       + S ++ E SS
Sbjct: 560  RKLLNSQAV---RFCLEGLLENSPHLICIGALKKLCNHPCLL-------FNSVKEKECSS 609

Query: 1067 S-DENMD---YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 1122
            + DEN +   Y  +I   P + N  L       F +K+                SGK+ +
Sbjct: 610  TWDENEEKSLYEGLINVFPADYNPLL-------FTEKE----------------SGKLQV 646

Query: 1123 LLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT 1180
            L  +L +   +   +K ++ S    TL+++            Q    + G  + RLDG+T
Sbjct: 647  LTKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEICKRHGYAYTRLDGQT 694

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
              S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+ R
Sbjct: 695  PISQRQQIVDGFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSR 753

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLF 1298
             WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL+  VVD  R   +   S EE+ +LF
Sbjct: 754  VWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRTSEYMQFSVEELKNLF 813

Query: 1299 EFGD 1302
               +
Sbjct: 814  TLNE 817


>gi|109086956|ref|XP_001088870.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
            [Macaca mulatta]
          Length = 908

 Score =  254 bits (649), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 188/604 (31%), Positives = 301/604 (49%), Gaps = 96/604 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  AIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   VI  +   LQ  LY
Sbjct: 500  REPSASEEEKELGERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604

Query: 1062 AEDSSSDENMD---YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
             E S+ D+N +   Y  ++   P + N  L       F +K+                SG
Sbjct: 605  KECSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------SG 641

Query: 1119 KMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            K+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + RL
Sbjct: 642  KLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTRL 689

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG+T  S+RQ++V+ FN   +  V   L+S++AG +G+NL   + +I+ D  WNP  D+Q
Sbjct: 690  DGQTPISQRQQIVDGFNSQ-HSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQ 748

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEM 1294
            A+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE+
Sbjct: 749  AMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEEL 808

Query: 1295 LHLF 1298
             +LF
Sbjct: 809  KNLF 812


>gi|350424065|ref|XP_003493677.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
            impatiens]
          Length = 748

 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 184/599 (30%), Positives = 295/599 (49%), Gaps = 86/599 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---V 780
            L+ HQ  G++FM+E +       K  +   GCI+A  MGLGKT Q I  L+T ++     
Sbjct: 154  LRPHQREGVKFMYECVTG-----KRIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 208

Query: 781  NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW---RAK 837
               +  A+IV P +++ NW  E  KW  + ++PL +        D +     K    R  
Sbjct: 209  KPLIEKAIIVAPSSLVKNWYNEIFKWLKNRVQPLAIDGGNKTDIDTKLTGFMKTYGRRCI 268

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              + +I Y  FR            +  ++ H  QD   +++CDE H +KN+   T QAL 
Sbjct: 269  NPILIISYETFR------------LHAQVLH--QDEVGLVLCDEGHRLKNSENQTYQALI 314

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             +K +RR+ L+G+P+QN+L+EY+ +V FV +G LG++ EFR +F+ PI  GQ   +T  +
Sbjct: 315  NLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPILRGQDAAATDTE 374

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DL 1014
             K+  +R   L   +   + R    ++ K LP K   V+ +++  LQ  LY  F+    +
Sbjct: 375  RKLAQERLAELVSIVNKCLIRRTSALLSKYLPLKYELVVCIRMGKLQTDLYNSFIQSDSV 434

Query: 1015 HGFTNDRVSNEKIRKSF--FAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
                 +  +N K  KSF   A    L ++  HP    L  DK                  
Sbjct: 435  RKSMEENSANSKKGKSFSTLAAITLLKKLCCHP---DLVYDK------------------ 473

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLDIL-TM 1129
                I EK             DGF  ++    +   ++ KE+  + SGK+++L  +L ++
Sbjct: 474  ----ILEK------------SDGF--ENAAKLMPPNYSTKEIMPELSGKLMVLDCLLASI 515

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
             +   DK ++ S    TLDL E    KL          K+  ++ RLDG     +R K+V
Sbjct: 516  KTTTNDKIVLVSNYTQTLDLFE----KL--------CHKRCYNYVRLDGTMTIKKRSKVV 563

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            E+FN+P N      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K 
Sbjct: 564  EKFNDP-NSNDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKL 622

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGDDENPD 1307
             F YR +  GT+EEKI++RQ  K+ L++ VVD+++ V R  +  ++  LF+  ++   D
Sbjct: 623  CFIYRFLCTGTIEEKIFQRQAHKKALSSTVVDQEEDVARHFTLNDLRDLFKLEENTISD 681


>gi|189211141|ref|XP_001941901.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187977994|gb|EDU44620.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 812

 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 185/628 (29%), Positives = 292/628 (46%), Gaps = 95/628 (15%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    V  E+    V I   ++  L+ HQV G++F++      I       K  GCI+
Sbjct: 190  ILGLKKKVEGERPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMI-----DPKANGCIM 244

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q IA ++T ++ S   G   ++  +I  P +++ NW  E +KW   +   
Sbjct: 245  ADEMGLGKTLQCIALMWTLLKQSPEAGKSTIQKCVIACPSSLVRNWANELIKWLGKDA-- 302

Query: 814  LRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLS--FGKHVKDRNMAR 864
            +  F ++   S++   + + +W    G      V ++ Y   R  +  FG          
Sbjct: 303  VTPFAIDGKASKEELIQQIRQWSIASGRSVVRPVLIVSYETLRLYADEFG---------- 352

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                  Q    +++CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ +++
Sbjct: 353  ------QTPIGLMLCDEGHRLKNGDSLTFTALNNLNVQRRVILSGTPIQNDLSEYFALLN 406

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F    +LG+  EFR  ++ PI  G+  N T EDVK   +R   L   +  F+ R   +++
Sbjct: 407  FANPNYLGTRMEFRKHYEIPILKGRDANGTDEDVKKGTERLTELLGLVNKFIIRRTNDIL 466

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
             K LP K   V+   L+P Q+ LY  F+   D+      + S              L ++
Sbjct: 467  SKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQSLLRGKGSQP------LKVIGMLKKL 520

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NHP +L L +D   P  E+                                D F QKD 
Sbjct: 521  CNHPDLLNLPED--LPGCENTL-----------------------------PDDFVQKDA 549

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                    T+    YSGKM +L  +L  + +   DK ++ S    TLD+           
Sbjct: 550  RGRDREVKTW----YSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCR----- 600

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
                    +G   +RLDG    S+RQKLV++FN+P +      L+S++AG  G+NL  AN
Sbjct: 601  -------SRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEF-VFLLSSKAGGCGLNLIGAN 652

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+++ D  WNP  D QA+ R WR GQ K  F YR +  GT+EEK+++RQ  K+ L++ VV
Sbjct: 653  RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVV 712

Query: 1281 DR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            D  + V R  S + +  LF++ ++   D
Sbjct: 713  DSAEDVERHFSLDSLRELFQYRNNTTSD 740


>gi|224008985|ref|XP_002293451.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220970851|gb|EED89187.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 543

 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 176/594 (29%), Positives = 292/594 (49%), Gaps = 77/594 (12%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            +P  ++  L+ HQ  G++FM++ ++  ++  +    G GCILA  MGLGKT Q +  ++T
Sbjct: 1    VPPVLAKWLRPHQREGVQFMYDCVM-GLKDFQ----GAGCILADDMGLGKTLQSVTLIWT 55

Query: 776  AMRS--VNLGLRTA---LIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRAE 829
             +++      +RT    ++V P +++ NW  EF+KW  P  +K L +   +  + ++  +
Sbjct: 56   LLQTGITANNIRTCNRIIVVCPCSLVKNWDNEFIKWLGPGVVKTLALAESDRKTVEKNID 115

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
               K +    V +  Y   R      HV      ++ C       D+LVCDEAH +KN  
Sbjct: 116  CFVKTKM-FNVLICSYETLRT-----HVGRLTKYKDCC-------DLLVCDEAHRLKNRE 162

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              T+ AL  +  +RR+ LTG+P+QN+L E+Y MVDF   G LG+  +FR +   PI  G+
Sbjct: 163  NQTSMALNSLPVRRRVLLTGTPMQNDLEEFYAMVDFTNPGILGTQEDFRRKMLYPILRGR 222

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
              ++T +    M +  + +   +  F+ R    +  + LPPK V V+   L+ +Q  +Y 
Sbjct: 223  EPDATEKQKTRMMEIQNDMSTTVNEFILRRVNTLNAQHLPPKLVQVVCCNLTEIQSNMYA 282

Query: 1010 RFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDE 1069
               +     +  V + K + +     Q L ++ NHP ++   K    P  +        +
Sbjct: 283  HLCNSKAMQH--VLDGK-QVNCLGSIQMLMKLCNHPSLVVNEKSSAAPGADGIA-----K 334

Query: 1070 NMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTM 1129
             M Y  + G++                          +     EL  SGKM +L  ++  
Sbjct: 335  FMPYEAIRGDR--------------------------NAPVMPEL--SGKMFVLFRLMRE 366

Query: 1130 C---SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQ 1186
                 N  DK ++ S    TLDLI     ++ R    G        + RLDG     +RQ
Sbjct: 367  MRRPGNGNDKIVIVSNYTQTLDLI----GRMCRENNWG--------FCRLDGSISMKKRQ 414

Query: 1187 KLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
            K+ + FN+P +  V   L+S++AG  G+NL   NR+++ D  WNP  D QA  R WR GQ
Sbjct: 415  KMCDEFNDPSSSLVA-FLLSSKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARCWRDGQ 473

Query: 1247 TKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
             K  F YR +A GT+EEKI++RQ++KEGL + V D+ QV+ ++S +++ +LF+ 
Sbjct: 474  KKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVVDDKDQVN-SLSTKDLKNLFKL 526


>gi|358371330|dbj|GAA87938.1| SNF2 family N-terminal domain protein [Aspergillus kawachii IFO 4308]
          Length = 778

 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 193/626 (30%), Positives = 295/626 (47%), Gaps = 103/626 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   ++P  I  +L    + HQV G++F++      + K  +G     CI+A  M
Sbjct: 163  LKKKTEGRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNANG-----CIMADGM 217

Query: 762  GLGKTFQVIAFLYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSE-LKPLRV 816
            GLGKT Q I+ ++T ++ S   G+ T    +I  P +++ NW  E +KW   + + P  V
Sbjct: 218  GLGKTLQCISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAV 277

Query: 817  FMLEDVSRDRRAELLAK---WRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   +  + EL+++   W    G      V +I Y   R                  
Sbjct: 278  -----DGKASKTELISQMKQWAIASGRSIVRPVLIISYETLR---------------LYV 317

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              L+D P  +L+CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ ++ F 
Sbjct: 318  DTLRDSPIGLLLCDEGHRLKNKESLTWTALNGLNVQRRVILSGTPIQNDLSEYFALLHFA 377

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
                LGS +EFR RF+ PI  G+    T ED+K  ++R   L   +  F+ R   +++ K
Sbjct: 378  NPNLLGSQNEFRKRFELPILRGRDAAGTEEDLKKGDERLAELSSIVNKFIIRRTNDILSK 437

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
             LP K   V+   +S  Q  LYK F+   ++      + S              L ++ N
Sbjct: 438  YLPVKYEHVVFCNMSEFQLGLYKHFIQSPEIKSLLRGKGSQP------LKAIGLLKKLCN 491

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP +L L+ D         ED    E                   +G++ D    K W  
Sbjct: 492  HPDLLNLSNDLPGCEYTFPEDYVPPEA------------------RGRDRD---IKSW-- 528

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
                        YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R   
Sbjct: 529  ------------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRTRG 572

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
             G L        RLDG     +RQKLV++FN P  +     L+S++AG  G+NL  ANR+
Sbjct: 573  YGSL--------RLDGTMTVGKRQKLVDKFNNPDGEEF-VFLLSSKAGGCGLNLIGANRL 623

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            ++ D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD 
Sbjct: 624  VLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDS 683

Query: 1283 -QQVHRTISKEEMLHLFEFGDDENPD 1307
             + V R  S E +  LF+F  +   D
Sbjct: 684  AEDVERHFSLESLRELFQFKPETRSD 709


>gi|291388286|ref|XP_002710621.1| PREDICTED: RAD54 homolog B [Oryctolagus cuniculus]
          Length = 911

 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 190/608 (31%), Positives = 306/608 (50%), Gaps = 81/608 (13%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     D   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPHLVYHLRPHQKEGIIFLYECVM-GMRM----DGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               +      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFVQCMFYS-VLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  AIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIIVS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ K+  +R+  L      FV R    ++ K LPPK   V+  +   LQ  LY
Sbjct: 500  REPSASEEEKKLGERRAAELTCLTGLFVLRRTQEIINKYLPPKIENVVFCRPGALQIELY 559

Query: 1009 KRFLDLHGFTNDRVSNEKIRKS--FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS 1066
            ++ L+       R   + + +S        AL ++ NHP +L  T      ++E    SS
Sbjct: 560  RKLLNSQAV---RFCLQGLSESSPHLLCIGALKKLCNHPCLLFST------AKEKESSSS 610

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
             +E+ + ++  G     +N F    N   F +++                SGK+ +L  +
Sbjct: 611  CNEDEERSLYKGL----LNVFPADYNPLLFTEEE----------------SGKLQVLSKL 650

Query: 1127 LTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            L +   +   +K ++ S    TL+++            Q    + G    RLDG+T  S+
Sbjct: 651  LAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAHTRLDGQTPISQ 698

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+ R WR 
Sbjct: 699  RQQIVDGFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRD 757

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEFGD 1302
            GQ  PV  YRL+  GT+EEKIY+RQ++K+GL+  VVD  +   H   S EE+ +LF    
Sbjct: 758  GQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLSKTSEHIQFSVEELKNLFTL-- 815

Query: 1303 DENPDPLT 1310
             EN D +T
Sbjct: 816  HENSDCVT 823


>gi|402878733|ref|XP_003903027.1| PREDICTED: DNA repair and recombination protein RAD54B [Papio anubis]
          Length = 908

 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 188/604 (31%), Positives = 301/604 (49%), Gaps = 96/604 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  AIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   VI  +   LQ  LY
Sbjct: 500  REPSASEEEKELGERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604

Query: 1062 AEDSSSDENMD---YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
             E S+ D+N +   Y  ++   P + N  L       F +K+                SG
Sbjct: 605  KECSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------SG 641

Query: 1119 KMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            K+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + RL
Sbjct: 642  KLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTRL 689

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG+T  S+RQ++V+ FN   +  V   L+S++AG +G+NL   + +I+ D  WNP  D+Q
Sbjct: 690  DGQTPISQRQQIVDGFNSQ-HSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQ 748

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEM 1294
            A+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE+
Sbjct: 749  AMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEEL 808

Query: 1295 LHLF 1298
             +LF
Sbjct: 809  KNLF 812


>gi|393245087|gb|EJD52598.1| hypothetical protein AURDEDRAFT_181169 [Auricularia delicata
            TFB-10046 SS5]
          Length = 983

 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 173/598 (28%), Positives = 299/598 (50%), Gaps = 88/598 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   ++  L+ HQ+ G++F++E ++  +R      +G GCILA  MG+GKT Q I  +
Sbjct: 310  VVIDPFLARHLRPHQIEGVKFVYECVM-GMRP----HEGFGCILADDMGMGKTLQTITLV 364

Query: 774  YTAMRS---VNLG--LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 828
            +T ++     N G  +   ++V PV +++NW +EF KW    L   RV +   +    +A
Sbjct: 365  WTLIKQNMYANQGPAVGKVMVVCPVTLINNWAKEFKKW----LGRDRVGVF--IGDKDKA 418

Query: 829  ELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI--LVCDEAHMIK 886
             +     ++  V +IGY   R +              I       P I  +VCDE H +K
Sbjct: 419  NIKQFINSRANVLIIGYEKLRTV--------------IADLAYCSPPIGLIVCDEGHRLK 464

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            +    + +  + ++ +RR+ L+G+P+QN+L E++ M DF   G L     F+  +++PI 
Sbjct: 465  SANNKSNKMFEALRTKRRVILSGTPIQNDLSEFHAMADFCNPGLLDDYSTFKRIYESPIL 524

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
              +  + T ++++    RS  L+   K FV R + +++   LPPK  + + V  + LQ  
Sbjct: 525  KSRAPDRTKKELEEGEARSARLHAIAKSFVLRREASILNNYLPPKHEYTVFVTPTELQHE 584

Query: 1007 LYKRFL-DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDS 1065
            ++ R L + H     R S   +     A  + L ++   P +L+             ED+
Sbjct: 585  MFSRLLLERHINRLSRGSTANV----LALIRTLTKLSTTPMLLKA-----------KEDA 629

Query: 1066 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLD 1125
            +SD+ +   + +  +   ++D                           +  SGK+ +L  
Sbjct: 630  ASDDPISEAITLIPEKTAVDD---------------------------MTVSGKLSILSK 662

Query: 1126 ILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            ILT+      +K ++ S    TLD+IE Y  K            +   ++RLDG+T++S+
Sbjct: 663  ILTILRKETEEKVIIVSHFTSTLDVIESYCKK------------QRYGYFRLDGQTQTSK 710

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            RQ+ V+ FN    K+    L+ST+AG +G+NL  A+R+++VD  WNP++DLQA+ R  R 
Sbjct: 711  RQEYVDNFNRTSQKQHFVFLLSTKAGGVGLNLVGASRLVLVDSDWNPSHDLQAMARIHRD 770

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGD 1302
            GQ +PVF YRL++ GT++EKI++RQVTK GL+  ++ + QV  + SK +     E  D
Sbjct: 771  GQKRPVFIYRLISTGTIDEKIFQRQVTKLGLSDSLMKQGQVGNSTSKSDSFSPQELRD 828


>gi|355698101|gb|EHH28649.1| DNA repair and recombination protein RAD54B [Macaca mulatta]
          Length = 908

 Score =  253 bits (647), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 188/604 (31%), Positives = 300/604 (49%), Gaps = 96/604 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  AIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   VI  +   LQ  LY
Sbjct: 500  REPSASEEEKELGERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604

Query: 1062 AEDSSSDENMD---YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
             E S+ D+N +   Y  ++   P + N  L       F +K+                SG
Sbjct: 605  KECSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------SG 641

Query: 1119 KMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            K+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + RL
Sbjct: 642  KLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTRL 689

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG+T  S+RQ++V+ FN   +  V   L+S++AG +G+NL   + +I+ D  WNP  D+Q
Sbjct: 690  DGQTPISQRQQIVDGFNSQ-HSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQ 748

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEM 1294
            A+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD      H   S EE+
Sbjct: 749  AMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTNTSEHIQFSVEEL 808

Query: 1295 LHLF 1298
             +LF
Sbjct: 809  KNLF 812


>gi|242790191|ref|XP_002481516.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
            10500]
 gi|218718104|gb|EED17524.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
            10500]
          Length = 808

 Score =  253 bits (647), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 196/625 (31%), Positives = 298/625 (47%), Gaps = 101/625 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +R++ E+  ++P  I  +L    + HQ+ G++F++      I      +   GCI+A  M
Sbjct: 193  LRKQVEDRPKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGMI-----DENANGCIMADEM 247

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTPVNVLHNWKQEFMKWRPSELKPLRVF 817
            GLGKT Q I+ ++T ++      +T +    I  P  ++ NW  E +KW    L P  V 
Sbjct: 248  GLGKTLQCISLMWTLLKQSPEAGKTTVQKCVIACPSTLVRNWANELVKW----LGPDAVI 303

Query: 818  MLEDVSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICH 868
                  +  +AEL   L +W    G      V ++ Y   R      +++D         
Sbjct: 304  PFVIDGKATKAELSSQLKQWAIASGRAIVRPVLIVSYETLR-----LNIED--------- 349

Query: 869  ALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
             L+D P  +L+CDE H +KN  + T + L  +   RR+ L+G+P+QN+L EY+ +V F  
Sbjct: 350  -LRDTPIGLLLCDEGHRLKNKESLTWKELNSLNVSRRVILSGTPIQNDLSEYFALVHFAN 408

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS +EFR RF+ PI  G+   ++ ED K  ++R   L   +  F+ R   +++ K 
Sbjct: 409  PNLLGSQNEFRKRFEIPILRGRDAAASDEDRKKGDERLAELSTIVNKFIIRRTNDILSKY 468

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   LS  Q  LY  FL   ++      + S              L ++ NH
Sbjct: 469  LPIKYEHVVFCNLSEFQLNLYNYFLQSPEIRSLLRGKGSQP------LKAIGLLKKLCNH 522

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L L++D         E    D   DY    G          +G++ D    K W   
Sbjct: 523  PDLLDLSRD-----LPGCEQYFPD---DYVPPDG----------RGRDRD---IKSW--- 558

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    
Sbjct: 559  -----------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRARAY 603

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    ++RQKLV++FN+P N      L+S++AG  GINL  ANR++
Sbjct: 604  GCL--------RLDGTMNVNKRQKLVDKFNDP-NGEEFVFLLSSKAGGCGINLIGANRLV 654

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  
Sbjct: 655  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSA 714

Query: 1283 QQVHRTISKEEMLHLFEFGDDENPD 1307
            + V R  S + +  LF+F  D   D
Sbjct: 715  EDVERHFSLDSLRELFQFKPDTRSD 739


>gi|390359838|ref|XP_780898.3| PREDICTED: DNA excision repair protein ERCC-6, partial
            [Strongylocentrotus purpuratus]
          Length = 1004

 Score =  253 bits (647), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 186/601 (30%), Positives = 284/601 (47%), Gaps = 104/601 (17%)

Query: 718  SSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAM 777
            S++ +K   +Q +G++++WE     + + K+G      IL H MGLGKT ++IAFL   +
Sbjct: 43   SALPSKGFRYQKIGVKWLWE-----LHRQKAGG-----ILGHEMGLGKTIEMIAFL-AGL 91

Query: 778  RSVNL--------GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR--DRR 827
            R+  L        GL   LIV P  VLH W +EF  W P     +RV +L +      +R
Sbjct: 92   RTSALPSKGFSYRGLGPVLIVCPATVLHQWLKEFHTWYPE----IRVAILHESGSHSGKR 147

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
              L+    +  GV +  ++  R       ++   + R   H        ++ DE H I+N
Sbjct: 148  ESLVRDMASSHGVLITSFSTVR-------LRQEMLLRYNWH-------YVILDEGHKIRN 193

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
              A+ T A KQ +   R+ LTGSP+QNNL E + ++DFV  G LG+   F  +F  PI  
Sbjct: 194  PDAEVTLACKQFRTPHRLILTGSPMQNNLRELWSLIDFVFPGKLGTLPVFMQQFSVPIVQ 253

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK--DLPPKTVFVITVKLSPLQR 1005
            G + N++   V+   + + IL + +  ++ R     VK+   LP K   V+   L+  Q 
Sbjct: 254  GGYANASKVQVQTAYKCACILRDSVSPYLLRRLKADVKQALQLPSKNEQVLFCHLTEEQT 313

Query: 1006 RLYKRFLDLHGFTNDRVSNEKIRKSF--FAGYQALAQIWNHPGILQLTKDKGYPSREDAE 1063
            ++Y+ +L        +  N  +R  +  FAG   L +I NHP ++      G P R  + 
Sbjct: 314  QVYEEYL------ASKECNLILRGEYKVFAGLITLRKICNHPDLVS-----GGP-RIFSH 361

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
             + SDE                                  DL  E  Y     +GKM+++
Sbjct: 362  QNLSDE----------------------------------DLTEEQRYGYYKRAGKMIVV 387

Query: 1124 LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
              +L +      + L+FSQS   LD++E ++             K    + R+DG T  S
Sbjct: 388  ESLLKLWKEQNHRVLLFSQSKQMLDIMEDFV-------------KDRYSYMRMDGTTTIS 434

Query: 1184 ERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1243
             RQ L+ +FN   + R+   L++TR G LG+NL  ANRVII D  WNP+ D QA  R+WR
Sbjct: 435  SRQPLITKFNS--DPRIFLFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERSWR 492

Query: 1244 YGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
             GQTK V  YRL+  G++EEKIY RQ+ K  L  RV+   +  R     ++  LF  G  
Sbjct: 493  IGQTKQVTIYRLLTAGSIEEKIYHRQIFKTFLTNRVLKDPRQRRFFKSNDLFELFTLGSS 552

Query: 1304 E 1304
            +
Sbjct: 553  D 553


>gi|255728815|ref|XP_002549333.1| DNA repair and recombination protein RAD54 [Candida tropicalis
            MYA-3404]
 gi|240133649|gb|EER33205.1| DNA repair and recombination protein RAD54 [Candida tropicalis
            MYA-3404]
          Length = 847

 Score =  253 bits (647), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 198/635 (31%), Positives = 308/635 (48%), Gaps = 93/635 (14%)

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVK 747
            E+LG      IV    EK  +   +P  I  KL    + HQV G++F++      I    
Sbjct: 222  EILG------IVTNPEEKLAKYPDVPVVIDPKLAKILRPHQVAGVKFLYRCTAGLIDA-- 273

Query: 748  SGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFM 804
               K  GCI+A  MGLGKT Q +  ++T +R    G +T    +IV P +++ NW  E +
Sbjct: 274  ---KAKGCIMADEMGLGKTLQCLTLMWTLLRQSPRGKKTIDKCIIVCPSSLVRNWANEIV 330

Query: 805  KWR-PSELKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHV 857
            KW     L PL V      S D     L +W +  G      V +I Y   R     ++V
Sbjct: 331  KWLGEGALTPLAVDGKSTKSSDL-GTALQQWASAQGRNIVRPVLIISYETLR-----RNV 384

Query: 858  KDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLM 917
             D+    E+         +++ DE H +KN  + T  AL  ++C+RR+ L+G+P+QN+L 
Sbjct: 385  -DKLAGTEV--------GLMLADEGHRLKNGESLTFTALNSLRCERRVILSGTPIQNDLS 435

Query: 918  EYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQ 977
            EY+ +++F   G+LG+ +EF+  F+N I  G+  ++T ++ +  +Q+   L + +  F+ 
Sbjct: 436  EYFALLNFANPGYLGTRNEFKKNFENAILRGRDADATEKEREKGDQKLVELSQLVSKFII 495

Query: 978  RMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA 1037
            R   +++ K LP K  +V+   LSP+Q+ LY  F+      N     + IR       +A
Sbjct: 496  RRTNDILSKYLPVKYEYVLFTGLSPMQKSLYSHFI------NSPDMKKLIRGIGSQPLKA 549

Query: 1038 ---LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDD 1094
               L ++ +HP +L L  D               E  D+ +     P +    +      
Sbjct: 550  IGLLKKLCSHPDLLDLPDDI--------------EGCDHLI-----PDDYESSISHNGGR 590

Query: 1095 GFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFY 1153
            G F+           T+    +S K ++L   L  +     DK ++ S    TLDLIE  
Sbjct: 591  GGFRNS------EVQTW----FSVKFMILERFLHKIKKETNDKIVLISNYTQTLDLIE-- 638

Query: 1154 LSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLG 1213
              K+ R  K G L        RLDG    ++RQKLV++FN P        L+S++AG  G
Sbjct: 639  --KMCRNKKYGVL--------RLDGTLSINKRQKLVDKFNNPDGSEF-IFLLSSKAGGCG 687

Query: 1214 INLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKE 1273
            INL  ANR++++D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K 
Sbjct: 688  INLIGANRLVLIDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKL 747

Query: 1274 GLAARVVD-RQQVHRTISKEEMLHLFEFGDDENPD 1307
             L++ VVD ++ V R  S + +  LFEF  D + D
Sbjct: 748  QLSSCVVDEKEDVDRLFSSDNLRKLFEFNPDTSCD 782


>gi|116207162|ref|XP_001229390.1| hypothetical protein CHGG_02874 [Chaetomium globosum CBS 148.51]
 gi|88183471|gb|EAQ90939.1| hypothetical protein CHGG_02874 [Chaetomium globosum CBS 148.51]
          Length = 1558

 Score =  253 bits (647), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 190/605 (31%), Positives = 291/605 (48%), Gaps = 144/605 (23%)

Query: 702  IVNVVREKGEEA-VRIPSSISAKLKAHQVVGIRFMWENII--QSIRKVKSGDKGLGCILA 758
            I+N  +E  ++A + I   I +++K HQ+ G+RFMW  ++   S R+        GC+LA
Sbjct: 730  IINESKESDDQALIYINDHIGSRIKDHQIDGVRFMWNQVVVDSSFRQ--------GCLLA 781

Query: 759  HTMGLGKTFQVIAFLYTAMRS-----------VNLGLRTA--LIVTPVNVLHNWKQEFMK 805
            HTMGLGKT QVI  L     S           +   LR +  LI+ P +++ NW+ E   
Sbjct: 782  HTMGLGKTMQVITLLVVVAESSASPDESIRSQIPESLRESRTLILCPPSLVDNWQDEIRM 841

Query: 806  WRPSE-LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAR 864
            W P E L P+     ++    R + ++  W A GGV ++GYT F  L         N   
Sbjct: 842  WAPDEVLGPVHTLETQNTPSSRES-VIQTWAASGGVLILGYTMFTILV--------NSGE 892

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
            ++   LQ+ P++++ DEAH IKN  +   QA        RIA+TGSPL NN  +  C   
Sbjct: 893  DMAKLLQETPNLVISDEAHYIKNPESLRHQAAANFATTSRIAMTGSPLTNNTPK--C--- 947

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
                                         T  D+K++                   +N  
Sbjct: 948  -----------------------------TRRDLKVL-------------------LN-- 957

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
              +LP K  F+IT+ L+ +Q R+Y+ +++   G +++  +N+ +  S  A    L  +  
Sbjct: 958  --ELPKKKEFIITLPLTKVQMRVYRAYIEWTTGHSSEIKNNQAMAWSLVA---KLTLVLA 1012

Query: 1044 HPGILQ-LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
            HP I + + + K   S+ +  D                  +M + ++             
Sbjct: 1013 HPFIFKTMLEAKAKSSKPEGGDE----------------LDMPEHVR------------- 1043

Query: 1103 NDLLHEHTYKEL-DY--SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            +DLL   +++E+ DY  S K+V+LL IL  C    DK LVFSQSIPTLD IE        
Sbjct: 1044 SDLLALVSFREIEDYALSNKIVVLLRILDECKKAKDKVLVFSQSIPTLDYIE-------- 1095

Query: 1160 PGKQGKLWKKGKDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
                  ++K+ +  Y RLDG T+ S RQ  V++FN   +   +  L+STR+G +G+N+H 
Sbjct: 1096 -----NIFKRKRVVYQRLDGSTKMSTRQASVKKFN--TDAESQVYLVSTRSGGVGLNIHG 1148

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANRV+I D  ++PT + QAI RA+R GQTKPV+ Y L   GT E+ I+   + K  LA R
Sbjct: 1149 ANRVVIFDFKYSPTDEQQAIGRAYRLGQTKPVYVYWLTVGGTFEDTIHNNAIFKAQLAKR 1208

Query: 1279 VVDRQ 1283
            VVD++
Sbjct: 1209 VVDKK 1213


>gi|194855241|ref|XP_001968502.1| GG24469 [Drosophila erecta]
 gi|292630862|sp|B3NAN8.1|RAD54_DROER RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=Protein okra
 gi|190660369|gb|EDV57561.1| GG24469 [Drosophila erecta]
          Length = 784

 Score =  253 bits (647), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 188/607 (30%), Positives = 296/607 (48%), Gaps = 108/607 (17%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +  ++T +
Sbjct: 152  LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 832
            R        +  A++V+P +++ NW++EF KW    L   P+     E+  R      + 
Sbjct: 204  RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMT 263

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
              R    V LI Y  FR            +  EI    + G  +++CDE H +KN+   T
Sbjct: 264  SSRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
             QAL  +K +RR+ L+G+P+QN+L EYY +V+FV    LG++  F+  F++ I  GQ+T+
Sbjct: 310  YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQ----RMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            ST  +     QR+    ++L G V     R    ++ K LP K   VI  KL+ +Q  LY
Sbjct: 370  STDAE----RQRAIAKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTSIQLELY 425

Query: 1009 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 1059
              FL      +D+V        EK   +  A    L +I +HP ++      +DKG+   
Sbjct: 426  TNFLK-----SDQVRRSLADCKEKASLTALADITTLKKICSHPNLIYEKITARDKGF--- 477

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
               E+S +    +YN       +++N  L GK                            
Sbjct: 478  ---ENSQNVLPSNYNA------KDLNPELSGK---------------------------- 500

Query: 1120 MVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
              +LLD +   + ++  DK ++ S    TLDL E    +L R  K G        + RLD
Sbjct: 501  -FMLLDFMLAAIRADGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLD 547

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G     +R K+V+RFN+P +      ++S++AG  G+NL  ANR+ + D  WNP  D QA
Sbjct: 548  GTMSIKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 606

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLH 1296
            + R WR GQ KP + YRL+A G++EEKI +RQ  K+ L++ ++D  +   +  +++++  
Sbjct: 607  MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKD 666

Query: 1297 LFEFGDD 1303
            LF F  D
Sbjct: 667  LFTFDAD 673


>gi|402465772|gb|EJW01437.1| hypothetical protein EDEG_00031 [Edhazardia aedis USNM 41457]
          Length = 793

 Score =  253 bits (647), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 177/591 (29%), Positives = 292/591 (49%), Gaps = 107/591 (18%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            E + +PS I  KL  +Q   I++ +E             K +G +LA  MGLGKT QVIA
Sbjct: 241  EDIVVPSFIWEKLFDYQKESIKWFYE----------LYKKEVGAVLADEMGLGKTLQVIA 290

Query: 772  FLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELL 831
            FL +A+   N  ++  LI+ P  +L+ W  EF K+ P     LR+ ++     D  ++L 
Sbjct: 291  FL-SALYISN-KIKFTLIIVPSTLLNQWVTEFKKFFPF----LRIILIHKSHTDNISKLF 344

Query: 832  AKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRAD 891
             +      V LI Y  ++  ++G H+++ N             D +V DE H IKN  ++
Sbjct: 345  KEITKCFCVVLISYDGYK--TYGSHLRNINF------------DYIVLDEGHKIKNKDSN 390

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
             +  + ++ C+ +I L+G+P+QNNL E + + +FV  G LG+  EF   +++PI+NG + 
Sbjct: 391  ISLQISRLVCKNKIVLSGTPIQNNLKELWAIFNFVNYGLLGTHEEFVTEYEDPIKNGGYR 450

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
             +T E V     +S +L   +K F+ R   + V  +LP KT  VI  KL+ +Q  LY++ 
Sbjct: 451  GATEEVVHKAYTKSRMLRNLIKPFIMRRLKSEVAGELPNKTDLVIFCKLTDIQESLYQK- 509

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
                      + +E I K    G Q+       PG++ L K   +P              
Sbjct: 510  ---------ELESEFIYK-ILIGKQSCM-----PGLMSLRKICNHP-------------- 540

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE--LDYSGKMVLLLDILTM 1129
                           +L  +N                 TYK+  +  SGKM  + ++L  
Sbjct: 541  ---------------YLFTRN----------------STYKDDIVKNSGKMKKVDELLQK 569

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
              + G K+L+F+Q I  ++L+E Y+++                + ++DG+T    R++ +
Sbjct: 570  WRSEGKKALIFTQMIGMIELLEIYMAE------------NDFSYLKMDGKTSLKTREEYI 617

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            ++FN   N  +   L++TR G LG+NL  A+R+II D  WNP+ D QA  RA+RYGQ K 
Sbjct: 618  DKFNSDDN--IFAFLLTTRVGGLGLNLVGASRIIIYDPDWNPSTDSQAKERAYRYGQEKD 675

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            V  YRL+A GT+EEKIY RQ+ K  L+ +++   ++ +   K+++  LF +
Sbjct: 676  VKIYRLIAAGTIEEKIYNRQIFKNMLSQKILSDPKLSKFFEKDDLNELFTY 726


>gi|346976842|gb|EGY20294.1| DNA repair and recombination protein RAD54 [Verticillium dahliae
            VdLs.17]
          Length = 822

 Score =  253 bits (647), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 197/660 (29%), Positives = 313/660 (47%), Gaps = 113/660 (17%)

Query: 666  QVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGE-EAVRIPSSISAKL 724
            +V   SK +   + T+D  L   +  E+LG          +++K E E  ++P  I  +L
Sbjct: 217  KVPEKSKDEPEPTTTIDAPLMHKSLAEILG----------IKKKVEGEHPKVPVVIDPRL 266

Query: 725  ----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-- 778
                + HQ+ G++FM++ +   I      ++  GCI+A  MGLGKT Q I  L+T ++  
Sbjct: 267  CKVLRPHQIEGVKFMYKCVTGMI-----DERANGCIMADEMGLGKTLQCITLLWTLLKQS 321

Query: 779  --SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRV---FMLEDVSRDRRAELLA 832
              +    ++ A++V P +++ NW  E +KW  ++ + P  +      E+++R  R   +A
Sbjct: 322  PEAGKSAIQKAIVVCPSSLVKNWANELVKWLGADAVTPFAIDGKASKEELTRQLRQWAIA 381

Query: 833  KWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRA 890
              RA    V ++ Y   R N+   KH K                 +++CDE H +KN  +
Sbjct: 382  SGRAVTRPVIIVSYETLRLNVDELKHTKI---------------GLMLCDEGHRLKNGDS 426

Query: 891  DTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH 950
             T  +L  +   RRI L+G+P+QN+L EY+ ++ F     LG+  EFR RF+ PI  G+ 
Sbjct: 427  QTFSSLNSLNVSRRIILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRD 486

Query: 951  TNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKR 1010
             ++   D K  ++    L   +  F+ R   +++ K LP K   V+   L+P Q  LY  
Sbjct: 487  ADADETDRKKGDECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNY 546

Query: 1011 FL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            FL   D+      + S              L ++ NHP +L                   
Sbjct: 547  FLTSPDIQALLRGKGSQP------LKAINILKKLCNHPDLL------------------- 581

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKND---DGFFQKDWWNDLLHEHTYKELD--YSGKMVL 1122
                           N+ND L G  +   D +  KD        H  +E+   YSGKM +
Sbjct: 582  ---------------NLNDDLPGSENCWPDDYVPKD-----ARGHRNREVKPWYSGKMQV 621

Query: 1123 LLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            L  +L  +  +  DK ++ S    TLD+ E    +L R    G L        RLDG   
Sbjct: 622  LDRMLARIRQDTNDKIVLISNYTQTLDIFE----RLCRSRAYGCL--------RLDGTMN 669

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
             ++RQKLV++FN+P  +     L+S++AG  GINL  ANR+++ D  WNP  D QA+ R 
Sbjct: 670  VNKRQKLVDKFNDPTGEEF-VFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARV 728

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEF 1300
            WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  + V R  S + +  LF++
Sbjct: 729  WRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDGLRELFQY 788


>gi|443894835|dbj|GAC72182.1| DNA repair protein [Pseudozyma antarctica T-34]
          Length = 865

 Score =  253 bits (646), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 190/633 (30%), Positives = 304/633 (48%), Gaps = 94/633 (14%)

Query: 685  LSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSI----SAKLKAHQVVGIRFMWENII 740
            + AGA I     ++   I+ + + K +E  +IP  I    S  L+ HQV G++F++    
Sbjct: 239  IEAGAPIPTPHKSLAD-ILGLNKAKSKEVEKIPVVIDPILSKVLRPHQVEGVKFLYRCTT 297

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTPVNVL 796
              +      +   GCI+A  MGLGKT Q IA ++T ++   +  ++ +    IV P +++
Sbjct: 298  GLVV-----ENAYGCIMADEMGLGKTLQCIALMWTLLKQSPIAKKSTIDKCIIVCPSSLV 352

Query: 797  HNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRN 850
             NW  E  KW  ++  P  + +   +S+D   E   +W    G      V ++ Y   RN
Sbjct: 353  RNWANELTKWLGAK-APGTLALDGKLSKDEMIEATRRWCNASGRAITQPVMIVSYETLRN 411

Query: 851  LSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGS 910
            L            +E     + G  +L+CDE H +KN  + T QAL Q+K +RR+ L+G+
Sbjct: 412  L------------QEELGNTEVG--LLLCDEGHRLKNADSLTFQALTQIKVRRRVILSGT 457

Query: 911  PLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYE 970
            P+QN+L EY+ +++F     LGS  EFR  F+  I  G+   +T +  +  N++   L  
Sbjct: 458  PIQNDLSEYFALLNFANPELLGSRVEFRKNFEIAILKGRDAEATEKQQQEANEKLSQLSA 517

Query: 971  QLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS 1030
             +  F+ R   +++ K LP K   V+  K++P Q  LY+ F          + + +I+K 
Sbjct: 518  LVSRFIIRRTNDLLSKYLPVKYEHVVFCKMAPFQLDLYRLF----------IRSPEIKKL 567

Query: 1031 FFA-GYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
                G Q L  I    GIL+   +         +   S++                    
Sbjct: 568  LRGTGSQPLKAI----GILKKLCNHPDLLDLPNDLDGSEQYF------------------ 605

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLD 1148
                +G+  +D          Y   + SGKM++L   L T+ +   DK ++ S    TLD
Sbjct: 606  ---PEGYTPRD--------RRYVNPELSGKMMVLQRFLETIRATTNDKIVLISNYTQTLD 654

Query: 1149 LIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTR 1208
            + E    ++ R  + G         +RLDG    ++RQKLV+RFN+P  K     L+S++
Sbjct: 655  VFE----RMCRANRWG--------MFRLDGTMTINKRQKLVDRFNDPEGKEF-IFLLSSK 701

Query: 1209 AGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKR 1268
            AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI +R
Sbjct: 702  AGGCGLNLIGANRLVLFDPDWNPASDQQALARVWRDGQKKSCFVYRFIATGSIEEKILQR 761

Query: 1269 QVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1300
            Q  K+ L++ VVD  Q   R  S E++  LF F
Sbjct: 762  QSHKQSLSSCVVDEAQDAARHFSGEDLRALFAF 794


>gi|148684276|gb|EDL16223.1| stretch responsive protein 278, isoform CRA_b [Mus musculus]
          Length = 1546

 Score =  253 bits (646), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 192/640 (30%), Positives = 287/640 (44%), Gaps = 123/640 (19%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   IP +I+  L+ +Q  G +F++ + I+          G GCIL   MGLGKT QVI
Sbjct: 118  EDGDSIPYTINRYLRDYQREGAQFLYRHYIE----------GRGCILGDDMGLGKTIQVI 167

Query: 771  AFLYTAM-----------------------RSVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            +FL   +                       +  +   +  LIV P++VL+NWK E   W 
Sbjct: 168  SFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW- 226

Query: 808  PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   RV +L    +D   ELL   + K  + L  Y   R            +  E  
Sbjct: 227  ----GYFRVTVLHGSKKDN--ELLRLKQRKCEIALTTYETLR------------LCLEEL 268

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            ++L+     ++ DEAH IKN +A  T+ +K VKC+ RI LTG+ LQNN+ E +C++D+  
Sbjct: 269  NSLEWS--AIIVDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAV 326

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
             G LGS   F+ +F +P+E+GQ   +T  ++    +  H L +++ G+  R    ++K  
Sbjct: 327  PGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQ 386

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGF------------------------TNDRVS 1023
            LP K   ++   L+  Q+ +Y+  L+                            TN R  
Sbjct: 387  LPKKEDRMVYCSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSR-- 444

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 1083
             + +R    +    L +I NH  +LQ            A  +S  +      +       
Sbjct: 445  GDTVRTLCLSYLTVLQKIANHVALLQ------------AASTSKHQETVIKRICDRVFSR 492

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 1143
              DF+Q   D  F             T  +  YSGKM +L  +L       DK L+FS S
Sbjct: 493  FPDFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHFRKQRDKVLLFSFS 540

Query: 1144 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1203
               LD+++ Y                G D+ RLDG T+S ER K+V+ FN   ++ V   
Sbjct: 541  TKLLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--SQDVNIC 586

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            L+ST AG LG+N   AN VI+ D +WNP  DLQA+ RA+R GQ + V   RL++ GT+EE
Sbjct: 587  LVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEE 646

Query: 1264 KIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
             +Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 647  IMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 686


>gi|449296175|gb|EMC92195.1| hypothetical protein BAUCODRAFT_569497 [Baudoinia compniacensis UAMH
            10762]
          Length = 965

 Score =  253 bits (646), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 177/590 (30%), Positives = 286/590 (48%), Gaps = 84/590 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            ++  L+ HQ  G+ F++E ++     +K  D G G ILA  MGLGKT Q IA ++T ++ 
Sbjct: 276  LTKSLREHQRAGVAFLYECVM----GMKQYD-GEGAILADEMGLGKTLQTIALVWTLLKQ 330

Query: 780  VNLG-----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
              +      ++ ALIV PV +++NW++EF KW   E    RV +    S+  R       
Sbjct: 331  NPVYQDAPVIKKALIVCPVTLINNWRKEFTKWLGKE----RVGVFVAESKKTRLTDFTMG 386

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
            R+   V +IGY   R            M +E       G DI++ DE H +K  +  +  
Sbjct: 387  RSYS-VMIIGYEKLR------------MVQEDLQK-GSGIDIVIADEGHRLKTAQNKSAL 432

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            A++ +K  RRI L+G+P+QN+L E++ MVDFV  G L     F+  F+NPI   +   ++
Sbjct: 433  AIRSLKTDRRIILSGTPIQNDLAEFFTMVDFVNPGLLNKYSVFKREFENPILKSRQPGAS 492

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
            ++DV+    RS  L +    F+ R    ++ K LPPKT +V+  + +  Q  +Y+  +  
Sbjct: 493  AKDVEKGEARSEELAKLTGMFILRRTAEILSKYLPPKTEYVVFCRPTEAQALVYRAIIGS 552

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 1074
              F N  + +  +          L ++ N P +L    DKG       +D++  E     
Sbjct: 553  PTF-NAALGSSAVTLELI---NILKKVCNSPTLLLRKGDKG-------DDATKPE----- 596

Query: 1075 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNM 1133
             ++G  P  +                           +    SGK+ +L  +L  + +  
Sbjct: 597  -LLGCVPSGL--------------------------LRTPGASGKLQVLDSLLHRIRTTT 629

Query: 1134 GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN 1193
             +K ++ S    T+D++   LS L               + RLDG T + +RQ+LV+RFN
Sbjct: 630  EEKVVLVSNYTATMDILGNLLSSL------------SYRYLRLDGSTPAGKRQELVDRFN 677

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
                      L+S +AG +G+NL  A+R+I+ D  WNP  DLQA+ R  R GQ +P F Y
Sbjct: 678  RSPPSNSFVFLLSAKAGGVGLNLIGASRLILFDLDWNPATDLQAMARVHRDGQKRPCFIY 737

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            RL+  G ++EKI++RQV+K GLA  +VD +      ++EE+  LF   +D
Sbjct: 738  RLVTQGALDEKIFQRQVSKTGLADSIVDGKSGVSGFTREELRDLFSLDED 787


>gi|354482677|ref|XP_003503524.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination protein
            RAD54B-like [Cricetulus griseus]
          Length = 950

 Score =  253 bits (646), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 188/597 (31%), Positives = 298/597 (49%), Gaps = 92/597 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L++ Q  GI F++E ++  +R+    +   G ILA  MGLGKT Q I+ ++T       G
Sbjct: 337  LRSFQKEGIIFLYECVM-GMRE----NGRCGAILADEMGLGKTLQCISLIWTLQCQDXXG 391

Query: 784  ----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG 839
                ++  LIVTP ++++NW++EF KW  SE   ++ F    V +D + E   K      
Sbjct: 392  GKPVIKRTLIVTPGSLVNNWRKEFQKWLGSER--IKTFT---VDQDHKVEEFIK-STFYS 445

Query: 840  VFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQ 898
            V +I Y    R+L   K +K                D+L+CDE H +KN+   TT AL  
Sbjct: 446  VLIISYEMLLRSLDQIKTIKF---------------DLLICDEGHRLKNSSIKTTAALFS 490

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            + C++R+ LTG+P+QN+L E++ +VDFV  G LGS   +R  ++ PI   +  +S+ E+ 
Sbjct: 491  LPCEKRVILTGTPVQNDLQEFFALVDFVNPGILGSLPSYRKIYEEPIIMSREPSSSKEE- 549

Query: 959  KIMNQRSHILYEQLKG-FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD---- 1013
            K + +R  +    L G F+ R    V+ K LPPK   V+  +   LQ  LY++ L     
Sbjct: 550  KELGERRAVELSCLTGRFILRRTQEVINKYLPPKIENVVFCQPVALQTELYRKLLSSQSV 609

Query: 1014 ---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
               L G   +         +      AL ++ NHP +L       + S +  E SSSDEN
Sbjct: 610  RFCLQGLLEN--------STHLICIGALKKLCNHPCLL-------FSSVKSKEFSSSDEN 654

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 1130
             + N+  G     +  +  G +   F + +                SGK+ +L+ +L   
Sbjct: 655  EEMNLCKGL----LTLYPTGYDPLQFSENE----------------SGKLQVLVKLLAAI 694

Query: 1131 SNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
              +   +K ++ S    TL+++E            G   + G    RLDG+T  S+RQ++
Sbjct: 695  HELRPTEKVVLVSNYRQTLNILE------------GICKRHGYACARLDGQTPVSQRQQI 742

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+ R WR GQ  
Sbjct: 743  VDNFNSKYSTDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKH 801

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLFEFGDD 1303
            PV  YRL+  GT+EEKIY+RQ++K+GL+  VVD  +   H   S EE+  LF   ++
Sbjct: 802  PVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTKSSEHIQFSVEELKDLFTLHEN 858


>gi|194214970|ref|XP_001915028.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 1
            [Equus caballus]
          Length = 910

 Score =  253 bits (646), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 183/605 (30%), Positives = 299/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GIRF++E ++      +  D+  G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPHLVCHLRPHQKEGIRFLYECVM----GFRVNDR-YGAILADEMGLGKTIQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIFA---VGQDHKIE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFTK-SPFYSVLIISYEMLLRSLDQVKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++R+ LTG+P+QN+L E++ ++DFV  G LG    +R  ++ PI   
Sbjct: 440  AVKTTAALISLSCEKRVILTGTPVQNDLQEFFALIDFVNPGILGPLSSYRKIYEEPIILS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    V+ K LPPK   V+  + + LQ  LY
Sbjct: 500  RQPSASEEEKELGERRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCQPAALQIELY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSRAVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  +I   P + N F+  + +                       S
Sbjct: 605  KECSSTWDKNEERSLYEGLINVFPADYNPFMFTEEE-----------------------S 641

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + R
Sbjct: 642  GKLQVLSKLLAVIRELCPAEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 689

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 690  LDGQTPVSQRQQIVDSFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 748

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+ L+  VVD  +   H   S EE
Sbjct: 749  QAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTKTSEHTQFSVEE 808

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 809  LKNLF 813


>gi|302408325|ref|XP_003001997.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
            VaMs.102]
 gi|261358918|gb|EEY21346.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
            VaMs.102]
          Length = 857

 Score =  253 bits (646), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 195/648 (30%), Positives = 309/648 (47%), Gaps = 113/648 (17%)

Query: 678  SVTLDGDLSAGASIEVLGDAITGYIVNVVREKGE-EAVRIPSSISAKL----KAHQVVGI 732
            + T+D  L   +  E+LG          +++K E E  ++P  I  +L    + HQ+ G+
Sbjct: 226  TTTIDAPLMHKSLAEILG----------IKKKVEGEHPKVPVVIDPRLCKVLRPHQIEGV 275

Query: 733  RFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR----SVNLGLRTAL 788
            +FM++ +   I      ++  GCI+A  MGLGKT Q IA L+T ++    +    ++ A+
Sbjct: 276  KFMYKCVTGMI-----DERANGCIMADEMGLGKTLQCIALLWTLLKQSPEAGKSAIQKAI 330

Query: 789  IVTPVNVLHNWKQEFMKWRPSE-LKPLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLI 843
            +V P +++ NW  E +KW  ++ + P  +      E+++R  R   +A  RA    V ++
Sbjct: 331  VVCPSSLVKNWANELVKWLGADAVTPFAIDGKASKEELTRQLRQWAIASGRAVTRPVIIV 390

Query: 844  GYTAFR-NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 902
             Y   R N+   KH K                 +++CDE H +KN  + T  +L  +   
Sbjct: 391  SYETLRLNVDELKHTKI---------------GLMLCDEGHRLKNGDSQTFSSLNSLNVS 435

Query: 903  RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMN 962
            RRI L+G+P+QN+L EY+ ++ F     LG+  EFR RF+ PI  G+  ++   D K  +
Sbjct: 436  RRIILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADADEVDRKKGD 495

Query: 963  QRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTN 1019
            +    L   +  F+ R   +++ K LP K   V+   L+P Q  LY  FL   D+     
Sbjct: 496  ECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFLTSPDIQALLR 555

Query: 1020 DRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGE 1079
             + S              L ++ NHP +L                               
Sbjct: 556  GKGSQP------LKAINILKKLCNHPDLL------------------------------- 578

Query: 1080 KPRNMNDFLQGKND---DGFFQKDWWNDLLHEHTYKELD--YSGKMVLLLDILT-MCSNM 1133
               N+ND L G  +   D +  KD        H  +E+   YSGKM +L  +L  +  + 
Sbjct: 579  ---NLNDDLPGSENCWPDDYVPKD-----ARGHRNREVKPWYSGKMQVLDRMLARIRQDT 630

Query: 1134 GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN 1193
             DK ++ S    TLD+ E    +L R    G L        RLDG    ++RQKLV++FN
Sbjct: 631  NDKIVLISNYTQTLDIFE----RLCRSRAYGCL--------RLDGTMNVNKRQKLVDKFN 678

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
            +P  +     L+S++AG  GINL  ANR+++ D  WNP  D QA+ R WR GQ K  F Y
Sbjct: 679  DPAGEEF-VFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVY 737

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEF 1300
            R +A GT+EEKI++RQ  K+ L++ VVD  + V R  S + +  LF++
Sbjct: 738  RFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDGLRELFQY 785


>gi|260948588|ref|XP_002618591.1| hypothetical protein CLUG_02050 [Clavispora lusitaniae ATCC 42720]
 gi|238848463|gb|EEQ37927.1| hypothetical protein CLUG_02050 [Clavispora lusitaniae ATCC 42720]
          Length = 1186

 Score =  253 bits (646), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 181/643 (28%), Positives = 285/643 (44%), Gaps = 124/643 (19%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            R+P  I   L  +Q   ++++WE   Q            G IL   MGLGKT QVIAFL 
Sbjct: 392  RLPGDIHPALFEYQKTCVQWLWELYCQKT----------GGILGDEMGLGKTIQVIAFL- 440

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRR------- 827
              +    L  +  L+V P  V++ W  EF +W P    PLR  +L  +    +       
Sbjct: 441  AGLHYSGLLDKPVLLVVPATVMNQWVNEFHRWWP----PLRCVILHSIGSGMKNMARMEE 496

Query: 828  -------------------------AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNM 862
                                     +E++ +    G V +  Y   R   + KH+    +
Sbjct: 497  ELEEHLDEEGEGELSVRAANAQANASEMVQRVLQHGHVLVTTYVGLR--VYAKHI----L 550

Query: 863  AREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
              E  +A        V DE H I+N  +  + A K++K   R+ L+G+P+QNNL+E + +
Sbjct: 551  PHEWGYA--------VLDEGHKIRNPNSAISLACKRIKTHNRVILSGTPIQNNLIELWSL 602

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
             DFV  G LG+   F  +F  PI  G + N+++  V+   + + +L + +  ++ R    
Sbjct: 603  FDFVFPGRLGTLPVFEQQFAIPINMGGYANASNLQVQTGYKCAVVLRDLISPYLLRRLKA 662

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
             V +DLP K+  V+ VKL+  Q  +Y++FL     + D  +  K R+    G   L +I 
Sbjct: 663  DVAQDLPKKSEMVLFVKLTQYQHDMYEKFLG----SEDAAAIMKGRRRVLMGVDILRKIC 718

Query: 1043 NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
            NHP ++  T                                                   
Sbjct: 719  NHPDLVDRTA-------------------------------------------------- 728

Query: 1103 NDLLHE--HTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
              LLH+  + Y     SGKM +   +L +    G ++L+F Q+   LD++E +++++   
Sbjct: 729  --LLHKKGYNYGSPARSGKMQVARQLLQLWQAQGHRTLLFCQTRQMLDILERFVARMSCI 786

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
              QG        + R+DG T   +RQ+LV+ FN   N+     L++T+ G LG+NL  A+
Sbjct: 787  DAQGAETSNPMRYLRMDGSTPIGKRQQLVDTFNA--NEYYHVFLLTTKVGGLGVNLTGAD 844

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            RVII D  WNP+ D+QA  RAWR GQ + +  YRLM  GT+EEKIY RQ+ K  L  +++
Sbjct: 845  RVIIFDPDWNPSTDIQARERAWRLGQKRDITIYRLMTAGTIEEKIYHRQIFKTFLTNKIL 904

Query: 1281 DRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQN 1323
               +  R     ++  LF  GD   PD     + E   GS + 
Sbjct: 905  KDPKQRRFFKSADLHDLFTLGD---PDEKGTETAEMFNGSEKT 944


>gi|367000820|ref|XP_003685145.1| hypothetical protein TPHA_0D00680 [Tetrapisispora phaffii CBS 4417]
 gi|357523443|emb|CCE62711.1| hypothetical protein TPHA_0D00680 [Tetrapisispora phaffii CBS 4417]
          Length = 944

 Score =  253 bits (645), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 179/566 (31%), Positives = 279/566 (49%), Gaps = 79/566 (13%)

Query: 754  GCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PS 809
            GCI+A  MGLGKT Q I  ++T ++    G R     +IV P ++++NW  E +KW  P 
Sbjct: 371  GCIMADEMGLGKTLQCITLMWTLLKQGPKGKRLIDKCIIVCPSSLVNNWANELIKWLGPG 430

Query: 810  ELKPLRV----FMLEDVSRDRRAELLAKW-RAKG-----GVFLIGYTAFRNLSFGKHVKD 859
             L PL +      L +      ++ +  W +A+G      V +I Y   R          
Sbjct: 431  TLTPLAIDGKKSSLANGGNATVSQAVRGWAQARGRNIVKPVLIISYETLR---------- 480

Query: 860  RNMAR-EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLME 918
            RN+ + + C        +++ DE H +KN  + T  AL  + C RR+ L+G+P+QN+L E
Sbjct: 481  RNVDQLQGCKV-----GLMLADEGHRLKNGESLTFTALNSIDCPRRVILSGTPIQNDLSE 535

Query: 919  YYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQR 978
            Y+ +++F   G LG+  EFR  F+ PI NG+ + ++ ED+K   ++   L   +  F+ R
Sbjct: 536  YFSLLNFSNPGLLGTRSEFRRNFEIPILNGRDSEASDEDIKKGERQLQKLSHIVSKFIIR 595

Query: 979  MDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL 1038
               +++ K LP K   VI V L P QR +YK  +          +++K           L
Sbjct: 596  RTNDILSKYLPCKYEHVIFVNLKPFQRDVYKSIIKTKEVAEAVKNSKKGGSMMLRSIGLL 655

Query: 1039 AQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
             ++ NHP ++ L ++       D  D S     DYN+    K R++              
Sbjct: 656  KKLCNHPDLINLEEEL------DNLDDSLVIPDDYNISNAAKSRDV-------------- 695

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
                           +++SGK  +L   L  + +   DK ++ S    TLDLIE    KL
Sbjct: 696  --------------RIEFSGKFAILERFLHKINTESNDKIVLISNYTQTLDLIE----KL 737

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
             R  + G L        RLDG    ++RQKLV+RFN P ++     L+S++AG  GINL 
Sbjct: 738  CRRRQYGVL--------RLDGTMNINKRQKLVDRFNSP-DEPEFIFLLSSKAGGCGINLI 788

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANR+I++D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEK+++RQ  K  L++
Sbjct: 789  GANRLILLDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKVFQRQSMKMSLSS 848

Query: 1278 RVVD-RQQVHRTISKEEMLHLFEFGD 1302
             VVD ++ V R  S + +  LF+  +
Sbjct: 849  CVVDEKEDVERLFSTDNLKQLFQLNE 874


>gi|351700010|gb|EHB02929.1| DNA excision repair protein ERCC-6 [Heterocephalus glaber]
          Length = 1488

 Score =  253 bits (645), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 179/608 (29%), Positives = 282/608 (46%), Gaps = 109/608 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT Q+I
Sbjct: 492  DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 541

Query: 771  AFL----YTAMRS------------VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPL 814
            AFL    Y+ +R+            +  GL   +IV P  V+H W +EF  W PS     
Sbjct: 542  AFLAGLSYSKIRTRGSNYRQVLLCRLFEGLGPTIIVCPTTVMHQWVKEFHTWWPS----F 597

Query: 815  RVFMLEDVSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
            RV +L +      R+  L+       G+ +  Y+  R       +   + +R+  H    
Sbjct: 598  RVAILHETGSCTHRKENLIRDIAHCHGILITSYSYIR-------LMQDDFSRQNWH---- 646

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                ++ DE H I+N  A  T A KQ +   RI L+GSP+QNNL E + + DFV  G LG
Sbjct: 647  ---YVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLG 703

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPP 990
            +   F  +F  PI  G + N++   VK   + + +L + +  + ++RM  +V +   LP 
Sbjct: 704  TLPVFMEQFSVPITMGGYANASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPD 763

Query: 991  KTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQL 1050
            K   V+  +L+  Q ++Y+ F++       ++ N +++   F+G  AL +I NHP +   
Sbjct: 764  KNEQVLFCRLTDEQHKVYQNFINSKEVY--KILNGEMQ--LFSGIVALRKICNHPDLF-- 817

Query: 1051 TKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHT 1110
                                          P+N+                  +D L E  
Sbjct: 818  ---------------------------SGGPKNLGGLP--------------DDELEEDQ 836

Query: 1111 YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
            +     SGKM+++  +L +    G + L+FSQS   L ++E +L              + 
Sbjct: 837  FGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLHILEVFLR------------AQK 884

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
              + ++DG T  + RQ L+ R+NE  +  +   L++TR G +G+NL  ANRVII D  WN
Sbjct: 885  YSYLKMDGTTTIASRQPLIARYNE--DASIFVFLLTTRVGGIGVNLTGANRVIIYDPDWN 942

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTIS 1290
            P+ D QA  RAWR GQ + V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R   
Sbjct: 943  PSTDTQARERAWRIGQKRQVTVYRLLMAGTIEEKIYHRQIFKQFLTNRVLKDPKPRRFFK 1002

Query: 1291 KEEMLHLF 1298
              ++  LF
Sbjct: 1003 SNDLYELF 1010


>gi|268564201|ref|XP_002639041.1| C. briggsae CBR-XNP-1 protein [Caenorhabditis briggsae]
          Length = 1333

 Score =  253 bits (645), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 158/443 (35%), Positives = 236/443 (53%), Gaps = 63/443 (14%)

Query: 638  ILDDAELGEETKRKIAIEKERQERLKSLQVQF-----------------SSKSKLMNSVT 680
            I+D ++L +ET      EKER++RL+  Q +F                 +S  + + SV 
Sbjct: 363  IMDSSDLAKETIDAENAEKERRKRLEKKQKEFNGIVLEEGEDLTEVLTGTSSQRKLKSVV 422

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII 740
            LD D ++                    E  +  V +  S+ + LK HQ  G++FM++   
Sbjct: 423  LDPDAAS--------------------EDPKTPVEVHQSLVSILKPHQAHGVQFMYDCAF 462

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALIVTPVNVLHN 798
            +SI ++ +  +G G ILAH MGLGKT QVI FL+T M    +G   R  L+V P NV+ N
Sbjct: 463  ESIERLNT--EGSGGILAHCMGLGKTLQVITFLHTVMMHPKIGEKCRRVLVVVPKNVIIN 520

Query: 799  WKQEFMKW---RPSELKPLRVFMLEDV-SRDRRAELLAKWR--AKGGVFLIGYTAFRNLS 852
            W +EF KW      EL  + V  L+   + + R  +L  W       V +IGY  FR L+
Sbjct: 521  WFKEFQKWLYDNDEELDTIEVNELDSYKTVEERRRVLQAWHRSTDPSVMIIGYDMFRILT 580

Query: 853  F--GKHVKDRNMAREICHA-------LQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQ 902
                   K   ++R++  A       LQD GPD++VCDEAH +KN  +  ++ + +++ +
Sbjct: 581  VEDDPKKKKTKLSRKMSKAKEDFRKYLQDPGPDMIVCDEAHKLKNDDSALSKCMVKIRTR 640

Query: 903  RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMN 962
            RRI LTG+PLQNNLMEY+CMV+FV+ G LG+  EF NRF N I  G+  ++++ +V  M 
Sbjct: 641  RRICLTGTPLQNNLMEYHCMVNFVKPGLLGTKTEFANRFVNIINRGRTKDASALEVSFMK 700

Query: 963  QRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRV 1022
            +R H+LY+ LK  V R D  V+ + +PPK  +VI V+L+  Q  LYK FL      +D V
Sbjct: 701  RRCHVLYDHLKKCVDRKDYRVLTEAIPPKQEYVINVRLTERQCELYKAFL------SDVV 754

Query: 1023 SNEKIRKSFFAGYQALAQIWNHP 1045
             +  + K     Y   ++IW HP
Sbjct: 755  GDTGLSKRLLPDYHMFSRIWTHP 777



 Score =  184 bits (466), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 92/215 (42%), Positives = 134/215 (62%), Gaps = 15/215 (6%)

Query: 1101 WWNDL--LHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
            W++ L    E    +   S K+VLL+ I+  C  +GDK LVFSQS+ +L LI   L  + 
Sbjct: 903  WFSKLGLCSEEDKDDFSLSNKLVLLMAIIKKCEEIGDKLLVFSQSLESLALIRRMLEYMA 962

Query: 1159 RPGK-----------QGKLWK--KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
              G+           +G+ W   +G+D+  +DG  +S +R  +  +FN+P N R +  LI
Sbjct: 963  GTGQWFSDDHEALNAEGETWSWLEGEDYMTIDGSVQSVKRDAVQTQFNDPENLRARLMLI 1022

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            STRAGSLG N+ +ANRV+I D  WNP++D Q+++R +R+GQTKPV+ YR +A GTMEE+I
Sbjct: 1023 STRAGSLGTNMVAANRVVIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERI 1082

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            YKRQVTKE  + RVVD  Q+ R     ++  L++F
Sbjct: 1083 YKRQVTKESTSMRVVDEAQIQRHYLGHDLTELYQF 1117


>gi|254568884|ref|XP_002491552.1| Protein involved in transcription-coupled repair nucleotide excision
            repair of UV-induced DNA lesion [Komagataella pastoris
            GS115]
 gi|238031349|emb|CAY69272.1| Protein involved in transcription-coupled repair nucleotide excision
            repair of UV-induced DNA lesion [Komagataella pastoris
            GS115]
 gi|328351939|emb|CCA38338.1| DNA excision repair protein ERCC-6 [Komagataella pastoris CBS 7435]
          Length = 1088

 Score =  253 bits (645), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 182/625 (29%), Positives = 285/625 (45%), Gaps = 123/625 (19%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            R+P  +   L  +Q   ++++WE  +Q +          G IL   MGLGKT Q+I+F+ 
Sbjct: 295  RLPGDVYPALFDYQKTCVQWLWELYLQKV----------GGILGDEMGLGKTVQIISFIA 344

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV------------ 822
                +  L  +  ++V P  VL  W  EF +W P    PLRV +L  +            
Sbjct: 345  GLHYTKKLN-KPVIVVCPATVLRQWCNEFHRWWP----PLRVVILHAIGTGLSGSRTSLQ 399

Query: 823  ------------------------SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVK 858
                                    +  R  EL+     +G V +  Y   R   + KH+ 
Sbjct: 400  NEASIEKLLEEEEYGSTKSLASLKAESRVKELIDSVFTRGHVIITTYVGLR--IYSKHL- 456

Query: 859  DRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLME 918
               + R+  +A        + DE H I+N  +D +   KQ++   R+ L+G+P+QNNL E
Sbjct: 457  ---LKRDWGYA--------ILDEGHKIRNPNSDISLTCKQLRTPNRVILSGTPIQNNLTE 505

Query: 919  YYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQR 978
             + + DF+  G LG+   F+N+F  PI  G + N+T+  V++  + +  L + +  ++ R
Sbjct: 506  LWSLFDFIFPGRLGTLPVFQNQFAIPINVGGYANATNLQVQVGYKCAVTLKDLISPYLLR 565

Query: 979  MDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSN-EKIRKSFFAGYQA 1037
                 V KDLP K+  V+  KL+  Q  LY++FL      +D +S   + ++    G   
Sbjct: 566  RVKADVAKDLPKKSEMVLFCKLTAPQHALYEKFL-----RSDELSRILQGKRQVLYGIDI 620

Query: 1038 LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
            L +I NHP +                           V +  K R+  D           
Sbjct: 621  LRKICNHPDL---------------------------VDVHAKRRSKKD----------- 642

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
                        TY     SGKM ++  +L +  + G K+L+F+Q+   LD++E +L +L
Sbjct: 643  -----------PTYGSASKSGKMQVVKKLLELWKSQGHKTLLFTQTRQMLDILESFLERL 691

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
               G + + +   K + R+DG T    RQ LV+ FN   +      L++TR G LG+NL 
Sbjct: 692  NAKGAEEEDFVPFK-FLRMDGTTSIGVRQSLVDVFNN--DPSYNVFLLTTRVGGLGVNLT 748

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANRVII D  WNP+ D+QA  RAWR GQ K V  YRLM  G++EEKIY RQ+ K+ L  
Sbjct: 749  GANRVIIYDPDWNPSTDVQARERAWRLGQKKDVTIYRLMIAGSIEEKIYHRQIFKQFLTN 808

Query: 1278 RVVDRQQVHRTISKEEMLHLFEFGD 1302
            +++   +  R     E+  LF  GD
Sbjct: 809  KILKDPKQRRFFKMNELQDLFTLGD 833


>gi|330930041|ref|XP_003302867.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
 gi|311321495|gb|EFQ89043.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
          Length = 812

 Score =  253 bits (645), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 185/628 (29%), Positives = 292/628 (46%), Gaps = 95/628 (15%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    V  E+    V I   ++  L+ HQV G++F++      I       K  GCI+
Sbjct: 190  ILGLKKKVEGERPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMI-----DPKANGCIM 244

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q IA ++T ++ S   G   ++  +I  P +++ NW  E +KW   +   
Sbjct: 245  ADEMGLGKTLQCIALMWTLLKQSPEAGKSTIQKCVIACPSSLVRNWANELVKWLGKDA-- 302

Query: 814  LRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLS--FGKHVKDRNMAR 864
            +  F ++   S++   + + +W    G      V ++ Y   R  +  FG          
Sbjct: 303  VTPFAIDGKASKEELIQQIRQWSIASGRAVVRPVLIVSYETLRLYAEEFG---------- 352

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                  Q    +++CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ +++
Sbjct: 353  ------QTPIGLMLCDEGHRLKNGDSLTFTALNNLNVQRRVILSGTPIQNDLSEYFALLN 406

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F    +LG+  EFR  ++ PI  G+  N T EDVK   +R   L   +  F+ R   +++
Sbjct: 407  FANPNYLGTRMEFRKHYEIPILKGRDANGTDEDVKKGTERLTELLGLVNKFIIRRTNDIL 466

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
             K LP K   V+   L+P Q+ LY  F+   D+      + S              L ++
Sbjct: 467  SKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQSLLRGKGSQP------LKVIGMLKKL 520

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NHP +L L +D   P  E+                                D F QKD 
Sbjct: 521  CNHPDLLNLPED--LPGCENTL-----------------------------PDDFVQKDA 549

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                    T+    YSGKM +L  +L  + +   DK ++ S    TLD+           
Sbjct: 550  RGRDREVKTW----YSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCR----- 600

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
                    +G   +RLDG    S+RQKLV++FN+P +      L+S++AG  G+NL  AN
Sbjct: 601  -------SRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEF-VFLLSSKAGGCGLNLIGAN 652

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+++ D  WNP  D QA+ R WR GQ K  F YR +  GT+EEK+++RQ  K+ L++ VV
Sbjct: 653  RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVV 712

Query: 1281 DR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            D  + V R  S + +  LF++ ++   D
Sbjct: 713  DSAEDVERHFSLDSLRELFQYRNNTMSD 740


>gi|393216995|gb|EJD02485.1| DNA repair protein, SNF2 family [Fomitiporia mediterranea MF3/22]
          Length = 814

 Score =  253 bits (645), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 189/616 (30%), Positives = 299/616 (48%), Gaps = 97/616 (15%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAHTMGLGKTFQV 769
            AV +   +S  L+ HQ+ G++F++        +  +G   +   GCI+A  MGLGKT Q 
Sbjct: 211  AVVLDPKLSKVLRPHQIEGVKFLY--------RCTTGMTIENQYGCIMADEMGLGKTLQC 262

Query: 770  IAFLYTAM----RSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
            IA +YT +    R+V   +   +I  P +++ NW  E  KW    L P     L    + 
Sbjct: 263  IALMYTLLKQSPRAVRPTIDKCIIACPSSLVRNWANELTKW----LGPEAPGSLAVDGKG 318

Query: 826  RRAELL---AKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI 876
             +AEL+   A+W A  G      V ++ Y   R LS  +++ +  +             +
Sbjct: 319  TKAELIEKVARWVAASGKTVTQPVMIVSYETLRTLS--EYLANCTIG------------L 364

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            L+CDE H +KN+ + T QAL  +  +RR+ L+G+P+QN+L EY+ +++F    +LGS  +
Sbjct: 365  LLCDEGHRLKNSDSLTFQALNALNVKRRVILSGTPIQNDLSEYFSLLNFANPNYLGSKGD 424

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            FR  F+N I  G+  +++ +       +   L   +  F+ R   +++ K LP K   V+
Sbjct: 425  FRKNFENAIIRGRDADASDQVKAACENKLKELGSMVTPFIIRRTNDLLSKYLPVKYEHVV 484

Query: 997  TVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD 1053
               LS  Q  LY+ F+   ++      R +N +  K+       L ++ NHP +L L  D
Sbjct: 485  FCGLSDFQLALYRLFITSPEIKALL--RGTNSQPLKAI----NILKKLCNHPELLDLPND 538

Query: 1054 KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE 1113
                  + +E    +  +       E+ RN     QG                       
Sbjct: 539  -----LQGSEGLIPEGFVGAGQTARERGRN-----QG---------------------VR 567

Query: 1114 LDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
             D+ GK ++L   L  + +  GDK ++ S    TLDL E    KL R         KG  
Sbjct: 568  CDWGGKFLVLERFLHRIRTETGDKIVLISNYTQTLDLFE----KLCR--------SKGYG 615

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
             +RLDG    S+RQKLV++FN+P N+     L+S++AG  GINL  ANR+I+ D  WNP 
Sbjct: 616  CFRLDGTMTVSKRQKLVDQFNDP-NRPEFVFLLSSKAGGCGINLIGANRLILFDPDWNPA 674

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISK 1291
             D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K+ L++ VVD  +   R  S 
Sbjct: 675  ADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQAQKQALSSAVVDATEDAERHFSV 734

Query: 1292 EEMLHLFEFGDDENPD 1307
            + +  LF F ++ + D
Sbjct: 735  DMLRQLFTFKENTSCD 750


>gi|169790814|ref|NP_001013626.2| RAD26L hypothetical protein isoform 1 [Mus musculus]
          Length = 1537

 Score =  253 bits (645), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 191/640 (29%), Positives = 287/640 (44%), Gaps = 123/640 (19%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   IP +I+  L+ +Q  G +F++ + I+          G GCIL   MGLGKT QVI
Sbjct: 109  EDGDSIPYTINRYLRDYQREGAQFLYRHYIE----------GRGCILGDDMGLGKTIQVI 158

Query: 771  AFLYTAM-----------------------RSVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            +FL   +                       +  +   +  LIV P++VL+NWK E   W 
Sbjct: 159  SFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW- 217

Query: 808  PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   RV +L    +D   ELL   + K  + L  Y   R            +  E  
Sbjct: 218  ----GYFRVTVLHGSKKDN--ELLRLKQRKCEIALTTYETLR------------LCLEEL 259

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            ++L+     ++ DEAH IKN +A  T+ +K VKC+ RI LTG+ LQNN+ E +C++D+  
Sbjct: 260  NSLEWS--AIIVDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAV 317

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
             G LGS   F+ +F +P+E+GQ   +T  ++    +  H L +++ G+  R    ++K  
Sbjct: 318  PGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQ 377

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGF------------------------TNDRVS 1023
            LP K   ++   L+  Q+ +Y+  L+                            TN R  
Sbjct: 378  LPKKEDRMVYCSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSR-- 435

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 1083
             + +R    +    L ++ NH  +LQ            A  +S  +      +       
Sbjct: 436  GDTVRTLCLSYLTVLQKVANHVALLQ------------AASTSKHQETVIKRICDRVFSR 483

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 1143
              DF+Q   D  F             T  +  YSGKM +L  +L       DK L+FS S
Sbjct: 484  FPDFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHFRKQRDKVLLFSFS 531

Query: 1144 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1203
               LD+++ Y                G D+ RLDG T+S ER K+V+ FN   ++ V   
Sbjct: 532  TKLLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--SQDVNIC 577

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            L+ST AG LG+N   AN VI+ D +WNP  DLQA+ RA+R GQ + V   RL++ GT+EE
Sbjct: 578  LVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEE 637

Query: 1264 KIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
             +Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 638  IMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 677


>gi|440640373|gb|ELR10292.1| hypothetical protein GMDG_04676 [Geomyces destructans 20631-21]
          Length = 1241

 Score =  253 bits (645), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 188/611 (30%), Positives = 290/611 (47%), Gaps = 104/611 (17%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            +R+P  I   L  +Q  G++++ E     +          G I+   MGLGKT QV++F+
Sbjct: 417  LRLPGDIYPALYDYQKTGVQWLGELYASQV----------GGIVGDEMGLGKTIQVVSFI 466

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRDR 826
                 S  L  +  ++V P  VL  W  EF +W P+    LRV +L        +V ++ 
Sbjct: 467  AALHFSKQLN-KPVIVVAPATVLQQWVNEFHRWWPA----LRVSILHTSGSGMLNVRQEG 521

Query: 827  RAELLAK--WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV------ 878
            R E   +   R +GG               + +K  ++       LQ   D+LV      
Sbjct: 522  RVEDEEEDITRTRGGKKEPKAKKAAKRIVDRVIKQGHVLVTTYAGLQTYGDLLVPVEWGY 581

Query: 879  --CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
               DE H I+N     T   K+++   RI L+G+PLQNNL+E + + DF+    LG+   
Sbjct: 582  AVLDEGHKIRNPNTTVTIYCKELQTPNRIILSGTPLQNNLIELWSLFDFIYPMRLGTLVN 641

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNVVKKDLPPKTVFV 995
            FRN+F+ PI+ G + N+T+  +    + +  L E +  + +QR+  +V   DLP KT  V
Sbjct: 642  FRNQFEIPIKLGGYANATNLQILTATKCAETLKEVIGPYLIQRLKADVAS-DLPKKTEQV 700

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSN-EKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
            +  KL+  QR+ Y+ FL     + + VS   + R+S + G   L ++ NHP +L+     
Sbjct: 701  LFCKLTKPQRQAYEEFLK----SEEMVSILNRTRQSLY-GIDILRKVCNHPDLLE----- 750

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                                      PR        +N  G+    W N           
Sbjct: 751  --------------------------PRL-------RNRAGY---KWGN----------A 764

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
            + SGKM ++  ++ M    GDK L+FSQ +  L++IE ++  L            G  + 
Sbjct: 765  NKSGKMQVVKALIMMWKAKGDKILLFSQGVQMLNIIEEFVKSL-----------GGFTYL 813

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            R+DG T   ERQ +V  FNE  N  +   L++T+ G LG+NL  ANRVII D  WNP+ D
Sbjct: 814  RMDGGTPIKERQTMVTNFNE--NPGINIFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTD 871

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            +QA  RAWR GQ K V  YRLM+ GT+EEKIY RQ+ K+ LA +++   +  +T   +++
Sbjct: 872  VQARERAWRLGQKKEVTIYRLMSAGTIEEKIYHRQIFKQFLADKILKDPKQRQTFHMKDL 931

Query: 1295 LHLFEFGDDEN 1305
              LF  G  E+
Sbjct: 932  YDLFTLGSSED 942


>gi|317031306|ref|XP_001393160.2| DNA repair protein rhp54 [Aspergillus niger CBS 513.88]
          Length = 813

 Score =  253 bits (645), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 193/626 (30%), Positives = 295/626 (47%), Gaps = 103/626 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   ++P  I  +L    + HQV G++F++      + K  +G     CI+A  M
Sbjct: 198  LKKKTEGRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNANG-----CIMADGM 252

Query: 762  GLGKTFQVIAFLYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSE-LKPLRV 816
            GLGKT Q I+ ++T ++ S   G+ T    +I  P +++ NW  E +KW   + + P  V
Sbjct: 253  GLGKTLQCISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAV 312

Query: 817  FMLEDVSRDRRAELLAK---WRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   +  + EL+++   W    G      V +I Y   R                  
Sbjct: 313  -----DGKASKTELISQMKQWAIASGRAIVRPVLIISYETLR---------------LYV 352

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              L+D P  +L+CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ ++ F 
Sbjct: 353  DTLRDSPIGLLLCDEGHRLKNKESLTWTALNGLNVQRRVILSGTPIQNDLSEYFALLHFA 412

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
                LGS +EFR RF+ PI  G+    T ED+K  ++R   L   +  F+ R   +++ K
Sbjct: 413  NPNLLGSQNEFRKRFELPILRGRDAAGTEEDLKKGDERLAELSGIVNKFIIRRTNDILSK 472

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
             LP K   V+   +S  Q  LYK F+   ++      + S              L ++ N
Sbjct: 473  YLPVKYEHVVFCNMSAFQLGLYKHFIQSPEIKSLLRGKGSQP------LKAIGLLKKLCN 526

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP +L L+ D         ED    E                   +G++ D    K W  
Sbjct: 527  HPDLLNLSNDLPGCEYTFPEDYVPPEA------------------RGRDRD---IKSW-- 563

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
                        YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R   
Sbjct: 564  ------------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRTRG 607

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
             G L        RLDG     +RQKLV++FN P  +     L+S++AG  G+NL  ANR+
Sbjct: 608  YGSL--------RLDGTMTVGKRQKLVDKFNNPDGEEF-VFLLSSKAGGCGLNLIGANRL 658

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            ++ D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD 
Sbjct: 659  VLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDS 718

Query: 1283 -QQVHRTISKEEMLHLFEFGDDENPD 1307
             + V R  S E +  LF+F  +   D
Sbjct: 719  AEDVERHFSLESLRELFQFKPETRSD 744


>gi|355779828|gb|EHH64304.1| DNA repair and recombination protein RAD54B [Macaca fascicularis]
          Length = 908

 Score =  253 bits (645), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 187/604 (30%), Positives = 300/604 (49%), Gaps = 96/604 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LG    +R  ++ PI   
Sbjct: 440  AIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGCLSSYRKIYEEPIILS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   VI  +   LQ  LY
Sbjct: 500  REPSASEEEKELGERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604

Query: 1062 AEDSSSDENMD---YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
             E S+ D+N +   Y  ++   P + N  L       F +K+                SG
Sbjct: 605  KECSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------SG 641

Query: 1119 KMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            K+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + RL
Sbjct: 642  KLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTRL 689

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG+T  S+RQ++V+ FN   +  V   L+S++AG +G+NL   + +I+ D  WNP  D+Q
Sbjct: 690  DGQTPISQRQQIVDGFNSQ-HSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQ 748

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEM 1294
            A+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE+
Sbjct: 749  AMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEEL 808

Query: 1295 LHLF 1298
             +LF
Sbjct: 809  KNLF 812


>gi|167385507|ref|XP_001737376.1| DNA repair and recombination protein RAD54B [Entamoeba dispar SAW760]
 gi|165899842|gb|EDR26336.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
            dispar SAW760]
          Length = 764

 Score =  253 bits (645), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 177/605 (29%), Positives = 296/605 (48%), Gaps = 83/605 (13%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            + +K E A+ I   I   L+ HQ+ G++FM+  I+      + G+   GCILA  MGLGK
Sbjct: 177  IDDKKEPAILIDPYIGKFLRPHQIEGVKFMYHCIM------RGGE--CGCILADEMGLGK 228

Query: 766  TFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
            T Q I  ++T  +  N+  +  +IV P +++ NW++EF KW   E  P++    +   ++
Sbjct: 229  TLQTITLIWTVYKQCNI--KKIVIVCPQSLIGNWEKEFKKWLGVERIPVQTGSSDSSMKE 286

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMI 885
            +  + +  +     V +I Y   R+     HV+     +           ++VCDE H I
Sbjct: 287  KVNDFIRDYIP---VLIISYEQVRS-----HVETLKKTK---------IGLIVCDEGHRI 329

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN  + T  +LK +   R I L+G+P+QN L ++Y +++F   G LG+   F+  F  PI
Sbjct: 330  KNLMSKTNSSLKALGAPRHIILSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPI 389

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
            +  Q  N++ E++++  +R+  L  +L  +V R    V +K LP KT  V+ +K S LQ 
Sbjct: 390  QKAQDGNASIEEIQLGTERAKELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSHLQI 449

Query: 1006 RLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSREDAED 1064
            +LYK  L         +  +K+ +     Y Q   ++ NHP ++       Y   E    
Sbjct: 450  KLYKIML-------KELDKKKLDQCGALKYIQLFTKLCNHPALIS-----KYLMEEKISL 497

Query: 1065 SSSDENMDYNVVIGEKPRN-MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
            + +DEN    V I E+  N  N  +Q                      KE+    K    
Sbjct: 498  NENDENCIKGVTINEESSNKFNITIQ--------------------FIKEIIIKSK---- 533

Query: 1124 LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
                       +K ++ S    TLDL E Y  K     KQ K++    ++ RLDG+T   
Sbjct: 534  -----------EKVVLVSNYTKTLDLFEMYF-KQEEEYKQKKIF----NYLRLDGKTSQK 577

Query: 1184 ERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1243
            +R  +VE+ N+  +      L+S++AG +G+NL   +R+I+ D  WNP  D QA+ R WR
Sbjct: 578  QRDIIVEKINDK-SSNFNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKDKQAMARIWR 636

Query: 1244 YGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLFEFGD 1302
             GQ K    YR++  GT+EEKIY+RQ+ K  ++  +++   ++ +++S E+++ +FE   
Sbjct: 637  DGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLEMGKSLSVEQLMKIFELNT 696

Query: 1303 DENPD 1307
            D   D
Sbjct: 697  DTISD 701


>gi|444519261|gb|ELV12696.1| DNA repair and recombination protein RAD54-like protein [Tupaia
            chinensis]
          Length = 620

 Score =  252 bits (644), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 187/612 (30%), Positives = 294/612 (48%), Gaps = 92/612 (15%)

Query: 704  NVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGL 763
              + EK    V +   +S  L+ HQ  G++F+WE +    R++       GCI+A  MGL
Sbjct: 6    TTIVEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGL 60

Query: 764  GKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE 820
            GKT Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +
Sbjct: 61   GKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---D 117

Query: 821  DVSRDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP 874
              S+D   + L  +      R    + +I Y  FR L  G               LQ G 
Sbjct: 118  GGSKDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGS 162

Query: 875  -DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
              +++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG+
Sbjct: 163  VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 222

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
            + EF+  F+ PI  G+   ++  + ++  +R   L   +   + R   +++ K LP K  
Sbjct: 223  AQEFKKHFELPILKGRDAAASEAERQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 282

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD 1053
             V+  +L+ LQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++    D
Sbjct: 283  QVVCCRLTSLQTELYKRFLR-QAKPAEELREGKMSVSSLSSITSLKKLCNHPALIY---D 338

Query: 1054 KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE 1113
            K        E +                  +N F  G +                    E
Sbjct: 339  KCVEEENGFEGA------------------LNIFPPGYSSKAL----------------E 364

Query: 1114 LDYSGKMVLLLDILTM---CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
               SGKM++L  IL +   CS+  DK ++ S    TLDL E             KL +  
Sbjct: 365  PQLSGKMLVLDYILAVTRSCSS--DKVVLVSNYTQTLDLFE-------------KLCRAR 409

Query: 1171 KDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
            +  Y RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  W
Sbjct: 410  RYLYVRLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDW 468

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRT 1288
            NP  D QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R 
Sbjct: 469  NPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQNVERH 528

Query: 1289 ISKEEMLHLFEF 1300
             S  E+  LF  
Sbjct: 529  FSLGELKELFTL 540


>gi|320581998|gb|EFW96217.1| DNA-dependent ATPase [Ogataea parapolymorpha DL-1]
          Length = 828

 Score =  252 bits (644), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 202/623 (32%), Positives = 303/623 (48%), Gaps = 110/623 (17%)

Query: 705  VVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLG 764
            V+++     V I   ++  L+ HQV G++F++      +       +  GCI+A  MGLG
Sbjct: 222  VMKQFPNVPVVIDPKLAKILRPHQVAGVKFLYRCTAGLVDA-----RAKGCIMADEMGLG 276

Query: 765  KTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            KT Q +  ++T +R    G +T    +IV P +++ NW  E  KW       L    L  
Sbjct: 277  KTLQCLTLMWTLLRQGPRGKKTIEKCVIVCPSSLVKNWANEIDKW-------LGKGTLNS 329

Query: 822  VSRDRR--------AELLAKW-RAKG-----GVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
            ++ D +        AE+L +W RAKG      V +I Y   R          RN+  E  
Sbjct: 330  LAMDGKGSKGAGDMAEVLRQWARAKGRSIVRPVLIISYETLR----------RNV--ENL 377

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
               + G  +++ DE H +KN  + T  AL  + C+RR+ L+G+P+QN+L EY+ +++F  
Sbjct: 378  EGTEIG--LILADEGHRLKNGDSLTFTALNSLNCERRVILSGTPIQNDLSEYFSLLNFSN 435

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
             G LGS  +FR  ++  I  G+ + +T E+ K  +++   L E +  F+ R   +++ K 
Sbjct: 436  PGVLGSRAQFRKNYELDILRGRDSLATEEERKKGDEKLQELTELVSRFIIRRTNDILSKY 495

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA---LAQIWNH 1044
            LP K  +V+   LS LQ +LY+ F+     T+  + N+ IR       +A   L ++  H
Sbjct: 496  LPVKYEYVVFCNLSELQSKLYRHFV-----TSPEI-NKLIRGLGSQPLKAIGLLRKLCTH 549

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENM---DYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
            P +L L             D S  EN+   DY            DF  G+N D    + W
Sbjct: 550  PRLLDL-----------PNDISGSENILPDDY------------DFGNGRNKD---VQTW 583

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                          YSGK  +L   L  +     DK ++ S    TLDLIE    KL R 
Sbjct: 584  --------------YSGKFAMLERFLFKIRKETDDKIVLISNFTQTLDLIE----KLCRH 625

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
             + G +        RLDG    ++RQKLV+RFN+P N      L+S++AG  GINL  AN
Sbjct: 626  HRFGTV--------RLDGSLGINKRQKLVDRFNDP-NADEFVFLLSSKAGGCGINLIGAN 676

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+I++D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K  L+  VV
Sbjct: 677  RLILLDPDWNPASDQQALARVWRDGQKKNCFIYRFIATGTIEEKIFQRQSAKMELSTCVV 736

Query: 1281 DRQQ-VHRTISKEEMLHLFEFGD 1302
            D  + V R  S E +  LF + D
Sbjct: 737  DSNEDVERQFSSENLKQLFLYND 759


>gi|115389990|ref|XP_001212500.1| DNA repair and recombination protein RAD54 [Aspergillus terreus
            NIH2624]
 gi|114194896|gb|EAU36596.1| DNA repair and recombination protein RAD54 [Aspergillus terreus
            NIH2624]
          Length = 821

 Score =  252 bits (644), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 193/619 (31%), Positives = 295/619 (47%), Gaps = 103/619 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K +   ++P  I  +L    + HQV G++F++      + K        GCI+A  M
Sbjct: 206  LKKKVDSRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDK-----NAHGCIMADGM 260

Query: 762  GLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRV 816
            GLGKT Q I+ ++T ++ S   G   ++  +I  P +++ NW  E  KW   + + P  V
Sbjct: 261  GLGKTLQCISLMWTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELGKWLGKDAITPFAV 320

Query: 817  FMLEDVSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   +  + EL   + +W    G      V ++ Y   R                  
Sbjct: 321  -----DGKATKTELTTQIKQWAIASGRSVVRPVLIVSYETLR---------------LYV 360

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
             AL+D P  +L+CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ +++F 
Sbjct: 361  DALKDSPIGLLLCDEGHRLKNKDSLTWTALNSLNVQRRVILSGTPIQNDLTEYFALLNFA 420

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
                LG+ +EFR RF+ PI  G+    T ED K  ++R   L   +  F+ R   +++ K
Sbjct: 421  NPDLLGTQNEFRKRFELPILRGRDAAGTEEDRKKGDERLAELSSIVNKFIIRRTNDILSK 480

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
             LP K   V+   LSP Q  LY  F+   ++      + S              L ++ N
Sbjct: 481  YLPVKYEHVVFCNLSPFQLDLYNHFIQSPEIKSLLRGKGSQP------LKAIGILKKLCN 534

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP +L L+ D   P  E A         DY    G          +G++ D    K W  
Sbjct: 535  HPDLLNLSND--LPGCEHAFPD------DYVPPEG----------RGRDRD---IKSW-- 571

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
                        YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R   
Sbjct: 572  ------------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRG 615

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
             G L        RLDG     +RQKLV++FN+P  +     L+S++AG  G+NL  ANR+
Sbjct: 616  YGSL--------RLDGTMNVKKRQKLVDKFNDPDGEEF-VFLLSSKAGGCGLNLIGANRL 666

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            ++ D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD 
Sbjct: 667  VLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDS 726

Query: 1283 -QQVHRTISKEEMLHLFEF 1300
             + V R  S E +  LF+F
Sbjct: 727  AEDVERHFSLESLRELFQF 745


>gi|109504572|ref|XP_341481.3| PREDICTED: uncharacterized protein LOC361197 isoform 2 [Rattus
            norvegicus]
 gi|109505337|ref|XP_001058999.1| PREDICTED: uncharacterized protein LOC361197 isoform 1 [Rattus
            norvegicus]
          Length = 1533

 Score =  252 bits (644), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 193/638 (30%), Positives = 290/638 (45%), Gaps = 119/638 (18%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   IP +I+  L+ +Q  G +F++ + I          KG GCIL   MGLGKT QVI
Sbjct: 109  EDGDSIPYTINRYLRDYQREGAQFLYRHYI----------KGRGCILGDDMGLGKTIQVI 158

Query: 771  AFLYTAMR-----------------------SVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            +FL   +                        S +   +  LIV P++VL+NWK E   W 
Sbjct: 159  SFLAAVLHKKGTREDIENNMPEFLLKSMKKESSSTARKMFLIVAPLSVLYNWKDELDTW- 217

Query: 808  PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   RV +L    +D   EL    + K  + L  Y   R            +  E  
Sbjct: 218  ----GYFRVTVLHGSKKDN--ELTRLKQRKCEIALTTYETLR------------LCLEEL 259

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            ++L+     ++ DEAH I+N  A  T+ +K VKC+ RI LTG+ LQNN+ E +C++D+  
Sbjct: 260  NSLEWS--AIIVDEAHRIRNPNARVTEVMKAVKCKVRIGLTGTILQNNMKELWCVMDWAV 317

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
             G LGS   F+ +F +P+E+GQ   +T  ++    +  H L +++ G+  R    ++K  
Sbjct: 318  PGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGYFLRRTKTLIKGQ 377

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHG----FTNDRV----SNEKIRKSFF------- 1032
            LP K   ++   L+  Q+ +Y+  L+        T+ +     S +K RK  +       
Sbjct: 378  LPKKEDRMVYSSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSQGD 437

Query: 1033 -------AGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMN 1085
                   +    L ++ NH  +LQ            A  +S  +      +  +      
Sbjct: 438  TVRTLCLSYLTVLQKVANHVALLQ------------AASTSKHQETLIKRICDQVFSRFP 485

Query: 1086 DFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIP 1145
            DF+Q   D  F             T  +  YSGKM +L  +L       DK L+FS S  
Sbjct: 486  DFVQKSKDAAF------------ETLSDPKYSGKMKVLDQLLNHFRKHRDKVLLFSFSTK 533

Query: 1146 TLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
             LD+++ Y                G D+ RLDG T+S ER K+V+ FN   ++ V   L+
Sbjct: 534  LLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--SQDVNICLV 579

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            ST AG LG+N   AN VI+ D +WNP  DLQAI RA+R GQ + V  +RL++ GT+EE +
Sbjct: 580  STMAGGLGLNFIGANVVILFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIM 639

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 640  YLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 677


>gi|384485625|gb|EIE77805.1| hypothetical protein RO3G_02509 [Rhizopus delemar RA 99-880]
          Length = 752

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 172/591 (29%), Positives = 283/591 (47%), Gaps = 96/591 (16%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNL 782
            L+ HQV G++F+++     +          GCI+A  MGLGKT Q IA ++T ++ S  +
Sbjct: 208  LRPHQVEGVKFLYQCTTGKVH-----PDAAGCIMADEMGLGKTLQCIALVWTLLQQSEAI 262

Query: 783  GLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRAELLAKWRAKG 838
            G  T   A++  P +++ NW  EF+KW   + ++PL   +++      +   + +W A  
Sbjct: 263  GKPTINKAIVTCPSSLVKNWANEFVKWLGENRVRPL---VVDSGGTKEKVAAVKRWGAAQ 319

Query: 839  G-----VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
            G     + +I Y + R  ++ K+++   +             +L+CDE H +KN+ +   
Sbjct: 320  GQIVNPILIISYESLR--TYSKYLRKSPIG------------MLLCDEGHRLKNSESLLF 365

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            Q L  +   +R+ L+G+P+QN+L EYY ++DF   G LG+  EFR  ++NPI  G+  ++
Sbjct: 366  QELNSLPVTKRVILSGTPIQNDLSEYYSLLDFANPGLLGTPSEFRRNYENPILRGRDADA 425

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL- 1012
            + ++ ++ +++    ++ +  F  R   +++ K LP K   V+  KL+PLQ  LY  FL 
Sbjct: 426  SEKERQVSDEKVAEFWKIVSRFTIRRTNDILSKYLPTKYEHVVFCKLAPLQEALYNVFLT 485

Query: 1013 --DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
              ++      + S              L ++ NHP +L L          D E   S   
Sbjct: 486  SPEIKTLLRGQGSQP------LKAITLLKKLCNHPSLLNLP--------NDLEGCESVLP 531

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-M 1129
             +Y                                 H     E  +SGK  ++  +L  +
Sbjct: 532  PNY---------------------------------HNSNKIEQSFSGKFAVMARMLAKI 558

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
                 DK ++ S    TLDL E Y  +     + G L        RLDG     +RQKLV
Sbjct: 559  KKETKDKIVLISNYTQTLDLFEAYCQE----QQYGVL--------RLDGSMTIPKRQKLV 606

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            +RFN+P        L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K 
Sbjct: 607  DRFNDPEGGEF-VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKD 665

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
             + YR +A GT+EEKI++RQ  K+ L+  VVD   + R  S  +M  LF++
Sbjct: 666  CYIYRFIAAGTIEEKIFQRQSHKQSLSNCVVDEADMERHFSLADMRQLFQY 716


>gi|315053993|ref|XP_003176371.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
            118893]
 gi|311338217|gb|EFQ97419.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
            118893]
          Length = 831

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 193/645 (29%), Positives = 306/645 (47%), Gaps = 101/645 (15%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII 740
            LD  L   +  E+LG      I   V E+ +  V I   ++  L+ HQ+ G++F++    
Sbjct: 201  LDQPLVHKSLAEILG------IKKNVDERPKVPVVIDPRLAKILRPHQIEGVKFLYRCTT 254

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVL 796
              + K  +G     CI+A  MGLGKT Q I  ++T ++ S   G   ++ A+I  P  ++
Sbjct: 255  GLVDKNANG-----CIMADGMGLGKTLQCITLMWTLLKQSPEAGKPTVQKAVIACPATLV 309

Query: 797  HNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK---WRAKGG------VFLIGYTA 847
             NW  E +KW   +   +  F+++   +  +AEL+++   W    G      V ++ Y  
Sbjct: 310  GNWANELVKWLGKD--AINPFVID--GKASKAELISQLRQWAIASGRSVVRPVLIVSYET 365

Query: 848  FRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIAL 907
             R  S    ++D  +             +L+CDE H +KN  + T  AL ++  Q+R+ L
Sbjct: 366  LRMNS--DELRDTQIG------------LLLCDEGHRLKNADSQTYVALNKLNVQKRVIL 411

Query: 908  TGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHI 967
            +G+P+QN+L EY+ ++DF   G LGS  EF   ++ PI  G+  + T E  +  N+R   
Sbjct: 412  SGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGTDEQQQKGNERLAE 471

Query: 968  LYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSN 1024
            L   +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   ++      + S 
Sbjct: 472  LLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQSPEIKSLLRGKGSQ 531

Query: 1025 EKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNM 1084
                         L ++ NHP +L+L++D     +   ED +                  
Sbjct: 532  P------LKAIGILKKLCNHPDLLKLSEDLPGCEQYFPEDMTVS---------------- 569

Query: 1085 NDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQS 1143
                 G+  D    K W              YSGKM++L  +L  +  +  DK ++ S  
Sbjct: 570  ----NGRRGDREV-KSW--------------YSGKMMVLDRMLARIRQDTNDKIVLISNY 610

Query: 1144 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1203
              TLDL E    +L R    G +        RLDG     +R KLV++FN+P N      
Sbjct: 611  TQTLDLFE----RLCRARAYGCI--------RLDGTMGVKKRSKLVDKFNDP-NGEEFVF 657

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            L+S++AG  GINL  ANR+++ D  WNP  D QA+ R WR GQ+K  F YR +A GT+EE
Sbjct: 658  LLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEE 717

Query: 1264 KIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            KI++RQ  K+ L++ VVD  + V R  S + +  LF+F  D   D
Sbjct: 718  KIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPDTTSD 762


>gi|241959152|ref|XP_002422295.1| ATP-dependent helicase, putative; DNA repair and recombination
            protein rad26 homologue, putative [Candida dubliniensis
            CD36]
 gi|223645640|emb|CAX40300.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
          Length = 1054

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 186/648 (28%), Positives = 294/648 (45%), Gaps = 128/648 (19%)

Query: 709  KGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ 768
            K  +  ++P  I   L  +Q   ++++WE   Q            G I+   MGLGKT Q
Sbjct: 259  KLNDKFKLPGDIYPSLFDYQKTCVQWLWELYTQKT----------GGIIGDEMGLGKTIQ 308

Query: 769  VIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV------ 822
            +I+FL   +    L  +  LIV P  VL+ W  EF +W P    PLR  +L  +      
Sbjct: 309  IISFL-AGLHYSGLLDKPVLIVVPATVLNQWVNEFHRWWP----PLRCIILHSIGSGMSG 363

Query: 823  ---------------------------SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGK 855
                                       S+    E++ +   KG V +  Y   R   + K
Sbjct: 364  AVSESKLEEYLESTDPDSTQSSLHGIKSQINAQEIIDRVMEKGHVLVTTYVGLR--IYSK 421

Query: 856  HVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNN 915
            H+    + RE  +        +V DE H I+N  +D +   K++K   RI L+G+P+QNN
Sbjct: 422  HI----LPREWGY--------VVLDEGHKIRNPDSDISLTCKKIKTVNRIILSGTPIQNN 469

Query: 916  LMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF 975
            L+E + + DFV  G LG+   F+ +F  PI  G + NS +  VK   + + +L + +  +
Sbjct: 470  LIELWSLFDFVFPGRLGTLPVFQQQFSIPINIGGYANSNNLQVKTAYKCAVVLRDLISPY 529

Query: 976  VQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY 1035
            + R   + V +DLP K   V+ VKL+ +Q+ LY+ FL     + D  S  K +++   G 
Sbjct: 530  MLRRLKSDVAQDLPKKNEMVLFVKLTKIQQELYESFLQ----SEDLESILKGKRNVLMGV 585

Query: 1036 QALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDG 1095
              L +I NHP ++                                               
Sbjct: 586  DILRKICNHPDLV----------------------------------------------- 598

Query: 1096 FFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLS 1155
                 + + L+ +  Y +   SGKM +L ++L +  +   K+L+F Q+   LD++E +++
Sbjct: 599  -----YRDTLMKKKNYGDPAKSGKMQVLKNLLRLWQHENHKTLLFCQTRQMLDILEKFVA 653

Query: 1156 KLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGI 1214
             L        L   G   Y R+DG T  S+RQ LV+ FN+  +  +   L++T+ G LG+
Sbjct: 654  NL-------SLINGGDFKYLRMDGSTPISKRQMLVDAFNQ--DPDMHVFLLTTKVGGLGV 704

Query: 1215 NLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEG 1274
            NL  A+RVII D  WNP+ D+QA  RAWR GQ + +  YRLM  G++EEKIY RQ+ K  
Sbjct: 705  NLTGADRVIIYDPDWNPSTDIQARERAWRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTF 764

Query: 1275 LAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQ 1322
            L  +++   +  R     ++  LF  GD +     TA   E G+ S Q
Sbjct: 765  LTNKILKDPKQRRFFKANDLHDLFTLGDQDEEGTETAHLFEGGEQSQQ 812


>gi|146324514|ref|XP_751168.2| dsDNA-dependent ATPase Rad54 [Aspergillus fumigatus Af293]
 gi|129557284|gb|EAL89130.2| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus Af293]
          Length = 807

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 193/625 (30%), Positives = 296/625 (47%), Gaps = 101/625 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   ++P  I  +L    + HQV G++F++      I K  +G     CI+A  M
Sbjct: 192  LKKKVESRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDKNANG-----CIMADGM 246

Query: 762  GLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF 817
            GLGKT Q I+ ++T ++ S   G   ++  +I  P +++ NW  E +KW   +   +  F
Sbjct: 247  GLGKTLQCISLMWTLLKQSPEAGKSTIQKCIIACPSSLVGNWANELVKWLGKDA--ITPF 304

Query: 818  MLEDVSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICH 868
             ++   +  +AEL   + +W    G      V ++ Y   R                   
Sbjct: 305  AID--GKASKAELTSQIKQWAIASGRAVVRPVLIVSYETLR---------------MYVD 347

Query: 869  ALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            AL+D P  +L+CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F  
Sbjct: 348  ALKDSPIGLLLCDEGHRLKNKDSLTWTALNSLNVTRRVILSGTPIQNDLSEYFALLHFAN 407

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS +EFR RF+ PI  G+    T ED K  ++R   L   +  F+ R   +++ K 
Sbjct: 408  PNLLGSQNEFRKRFEIPILKGRDAAGTEEDRKKGDERLAELSGIVNKFIIRRTNDILSKY 467

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   LS  Q  LY  F+   ++      + S              L ++ NH
Sbjct: 468  LPIKYEHVVFCNLSQFQLDLYNHFIQSPEIKSLLRGKGSQP------LKAIGILKKLCNH 521

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L LT+D         ED    E                   +G++ D    K W   
Sbjct: 522  PDLLDLTRDLPGCEHTFPEDYVPPE------------------ARGRDRD---IKSW--- 557

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    
Sbjct: 558  -----------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRGY 602

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    ++RQKLV++FN P  +     L+S++AG  G+NL  ANR++
Sbjct: 603  GSL--------RLDGTMNINKRQKLVDKFNNPDGEEF-VFLLSSKAGGCGLNLIGANRLV 653

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  
Sbjct: 654  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSA 713

Query: 1283 QQVHRTISKEEMLHLFEFGDDENPD 1307
            + V R  S E +  LF+F  +   D
Sbjct: 714  EDVERHFSLESLRELFQFKPETRSD 738


>gi|429860233|gb|ELA34975.1| DNA repair protein rhp26 [Colletotrichum gloeosporioides Nara gc5]
          Length = 1143

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 182/615 (29%), Positives = 278/615 (45%), Gaps = 126/615 (20%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
             +++P  I   L A+Q  G+ ++ E   Q          G+G I+   MGLGKT Q IA 
Sbjct: 376  GLKLPGDIHPSLFAYQKTGVHWLAELYEQ----------GVGGIIGDEMGLGKTVQAIAM 425

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML------------- 819
            +     S  L  +  ++V P  V+  W  EF +W P    PLRV +L             
Sbjct: 426  VAALHYSKKLD-KPVIVVVPATVMKQWVNEFHRWWP----PLRVSILHSSGSGMMNQHED 480

Query: 820  --------EDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
                    E  +R     ++ +    G V +  Y   +  S+ + +            LQ
Sbjct: 481  DSDLDDGGESTNRVAARRIVNRVVKHGHVLVTTYAGLQ--SYNEEL------------LQ 526

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                  + DE H I+N  A+ T A K +    R+ L+G+P+QNNL E + + DF+    L
Sbjct: 527  HSWGYAILDEGHKIRNPNAEITVACKHLNTVNRVILSGTPIQNNLTELWSLFDFIFPMRL 586

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPP 990
            G+   FR +F+ PI+ G + N+T+  V    + +  L E +  ++ QR+ ++V   DLP 
Sbjct: 587  GTLVSFRTQFELPIKQGGYANATNLQVMTAEKCATTLKETISQYLLQRLKIDVAS-DLPE 645

Query: 991  KTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRK-SFFAGYQALAQIWNHPGIL- 1048
            KT  V+  KL+  Q   Y RF+     ++D V     RK     G   L +I NHP +L 
Sbjct: 646  KTEQVLFCKLTQSQLTAYTRFI-----SSDAVGEIMTRKRKALYGIDILRKICNHPDLLD 700

Query: 1049 -QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
             +L +D  Y                                           DW +    
Sbjct: 701  DRLKRDAKY-------------------------------------------DWGDPA-- 715

Query: 1108 EHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
                     SGKM ++ ++L M    G K+L+FSQ+   L+++E ++ ++          
Sbjct: 716  --------KSGKMQMVNELLPMWKRFGHKTLLFSQTKLMLNILEKFIRRM---------- 757

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
              G  + R+DG T   +RQ L++RFN   +  +   L++TR G LGINL  A R+II D 
Sbjct: 758  -DGVSYVRMDGDTPIEQRQALIDRFNH--DPSIDVFLLTTRTGGLGINLTGATRIIIYDP 814

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
             WNP+ D+QA  RAWR GQTKPV  YRLM  GT+EEKIY RQ+ K+ +  +V+   +   
Sbjct: 815  DWNPSTDMQARERAWRLGQTKPVAIYRLMTSGTIEEKIYHRQIFKQFMTNKVLKDPKQRA 874

Query: 1288 TISKEEMLHLFEFGD 1302
                 ++  LF FGD
Sbjct: 875  NFDLSDLYDLFSFGD 889


>gi|149029138|gb|EDL84423.1| similar to putative repair and recombination helicase RAD26L
            (predicted), isoform CRA_b [Rattus norvegicus]
          Length = 1542

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 193/638 (30%), Positives = 290/638 (45%), Gaps = 119/638 (18%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   IP +I+  L+ +Q  G +F++ + I          KG GCIL   MGLGKT QVI
Sbjct: 118  EDGDSIPYTINRYLRDYQREGAQFLYRHYI----------KGRGCILGDDMGLGKTIQVI 167

Query: 771  AFLYTAMR-----------------------SVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            +FL   +                        S +   +  LIV P++VL+NWK E   W 
Sbjct: 168  SFLAAVLHKKGTREDIENNMPEFLLKSMKKESSSTARKMFLIVAPLSVLYNWKDELDTW- 226

Query: 808  PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   RV +L    +D   EL    + K  + L  Y   R            +  E  
Sbjct: 227  ----GYFRVTVLHGSKKDN--ELTRLKQRKCEIALTTYETLR------------LCLEEL 268

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            ++L+     ++ DEAH I+N  A  T+ +K VKC+ RI LTG+ LQNN+ E +C++D+  
Sbjct: 269  NSLEWS--AIIVDEAHRIRNPNARVTEVMKAVKCKVRIGLTGTILQNNMKELWCVMDWAV 326

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
             G LGS   F+ +F +P+E+GQ   +T  ++    +  H L +++ G+  R    ++K  
Sbjct: 327  PGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGYFLRRTKTLIKGQ 386

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHG----FTNDRV----SNEKIRKSFF------- 1032
            LP K   ++   L+  Q+ +Y+  L+        T+ +     S +K RK  +       
Sbjct: 387  LPKKEDRMVYSSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSQGD 446

Query: 1033 -------AGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMN 1085
                   +    L ++ NH  +LQ            A  +S  +      +  +      
Sbjct: 447  TVRTLCLSYLTVLQKVANHVALLQ------------AASTSKHQETLIKRICDQVFSRFP 494

Query: 1086 DFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIP 1145
            DF+Q   D  F             T  +  YSGKM +L  +L       DK L+FS S  
Sbjct: 495  DFVQKSKDAAF------------ETLSDPKYSGKMKVLDQLLNHFRKHRDKVLLFSFSTK 542

Query: 1146 TLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
             LD+++ Y                G D+ RLDG T+S ER K+V+ FN   ++ V   L+
Sbjct: 543  LLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--SQDVNICLV 588

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            ST AG LG+N   AN VI+ D +WNP  DLQAI RA+R GQ + V  +RL++ GT+EE +
Sbjct: 589  STMAGGLGLNFIGANVVILFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIM 648

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 649  YLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 686


>gi|159130376|gb|EDP55489.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus A1163]
          Length = 681

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 193/625 (30%), Positives = 296/625 (47%), Gaps = 101/625 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   ++P  I  +L    + HQV G++F++      I K  +G     CI+A  M
Sbjct: 66   LKKKVESRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDKNANG-----CIMADGM 120

Query: 762  GLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF 817
            GLGKT Q I+ ++T ++ S   G   ++  +I  P +++ NW  E +KW   +   +  F
Sbjct: 121  GLGKTLQCISLMWTLLKQSPEAGKSTIQKCIIACPSSLVGNWANELVKWLGKD--AITPF 178

Query: 818  MLEDVSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICH 868
             ++   +  +AEL   + +W    G      V ++ Y   R                   
Sbjct: 179  AID--GKASKAELTSQIKQWAIASGRAVVRPVLIVSYETLRMY---------------VD 221

Query: 869  ALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            AL+D P  +L+CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F  
Sbjct: 222  ALKDSPIGLLLCDEGHRLKNKDSLTWTALNSLNVTRRVILSGTPIQNDLSEYFALLHFAN 281

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS +EFR RF+ PI  G+    T ED K  ++R   L   +  F+ R   +++ K 
Sbjct: 282  PNLLGSQNEFRKRFEIPILKGRDAAGTEEDRKKGDERLAELSGIVNKFIIRRTNDILSKY 341

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   LS  Q  LY  F+   ++      + S              L ++ NH
Sbjct: 342  LPIKYEHVVFCNLSQFQLDLYNHFIQSPEIKSLLRGKGSQP------LKAIGILKKLCNH 395

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L LT+D         ED    E                   +G++ D    K W   
Sbjct: 396  PDLLDLTRDLPGCEHTFPEDYVPPEA------------------RGRDRD---IKSW--- 431

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    
Sbjct: 432  -----------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRGY 476

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    ++RQKLV++FN P  +     L+S++AG  G+NL  ANR++
Sbjct: 477  GSL--------RLDGTMNINKRQKLVDKFNNPDGEEF-VFLLSSKAGGCGLNLIGANRLV 527

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  
Sbjct: 528  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSA 587

Query: 1283 QQVHRTISKEEMLHLFEFGDDENPD 1307
            + V R  S E +  LF+F  +   D
Sbjct: 588  EDVERHFSLESLRELFQFKPETRSD 612


>gi|338728445|ref|XP_003365673.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
            [Equus caballus]
          Length = 727

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 183/605 (30%), Positives = 299/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GIRF++E ++      +  D+  G ILA  MGLGKT Q I+ +
Sbjct: 103  VVIDPHLVCHLRPHQKEGIRFLYECVM----GFRVNDR-YGAILADEMGLGKTIQCISLI 157

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 158  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIFA---VGQDHKIE 212

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 213  EFTK-SPFYSVLIISYEMLLRSLDQVKNIKF---------------DLLICDEGHRLKNS 256

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++R+ LTG+P+QN+L E++ ++DFV  G LG    +R  ++ PI   
Sbjct: 257  AVKTTAALISLSCEKRVILTGTPVQNDLQEFFALIDFVNPGILGPLSSYRKIYEEPIILS 316

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    V+ K LPPK   V+  + + LQ  LY
Sbjct: 317  RQPSASEEEKELGERRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCQPAALQIELY 376

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 377  RKLLNSRAVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 421

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  +I   P + N F+  + +                       S
Sbjct: 422  KECSSTWDKNEERSLYEGLINVFPADYNPFMFTEEE-----------------------S 458

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + R
Sbjct: 459  GKLQVLSKLLAVIRELCPAEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 506

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 507  LDGQTPVSQRQQIVDSFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 565

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+ L+  VVD  +   H   S EE
Sbjct: 566  QAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTKTSEHTQFSVEE 625

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 626  LKNLF 630


>gi|297683312|ref|XP_002819327.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
            [Pongo abelii]
          Length = 910

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 187/605 (30%), Positives = 300/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFTK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   V+  +   LQ  LY
Sbjct: 500  REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  ++   P + N  L       F +K+                S
Sbjct: 605  KECSSTYDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 641

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + R
Sbjct: 642  GKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 689

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +  V   L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 690  LDGQTPISQRQQIVDGFNSQ-HSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 748

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE
Sbjct: 749  QAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEE 808

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 809  LKNLF 813


>gi|392595792|gb|EIW85115.1| DNA repair protein, SNF2 family [Coniophora puteana RWD-64-598 SS2]
          Length = 811

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 215/710 (30%), Positives = 327/710 (46%), Gaps = 125/710 (17%)

Query: 627  GKRKQKKKIRRILDDAE------LGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVT 680
            G R Q K I R L +        L + T      +++RQER+K    +  +K++  N + 
Sbjct: 126  GIRPQAKLIPRPLHNPMQDHAIVLYDPTIDDRETDEDRQERIKE---EARAKAEQENQMK 182

Query: 681  LDGDLSAGASIE-VLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENI 739
              G  +   S+  +LG+      V  V       V I   +S  L+ HQV G++F++   
Sbjct: 183  AAGLYNPHKSLRAILGEDKPRETVPKV------PVVIDPILSKVLRPHQVEGVKFLY--- 233

Query: 740  IQSIRKVKSG---DKGLGCILAHTMGLGKTFQVIAFLYTAM----RSVNLGLRTALIVTP 792
                 K  +G   +   GCI+A  MGLGKT Q IA L+T +    R     +   +I  P
Sbjct: 234  -----KCTTGMVVENQYGCIMADEMGLGKTLQCIALLWTLVKQSPRPGKPTIEKCIIACP 288

Query: 793  VNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELL---AKWRAKGG------VFLI 843
             +++ NW  E  KW    L    +  L    +  + ELL   A+W A  G      V ++
Sbjct: 289  SSLVKNWANELSKW----LGKDTISALAVDGKGGKGELLEKVARWVAASGRNVTQPVMIV 344

Query: 844  GYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQR 903
             Y   R L+               H       +L+CDE H +KN+ + T QAL  +  +R
Sbjct: 345  SYETLRTLT--------------AHLASCSIGLLLCDEGHRLKNSESLTFQALNSLDVRR 390

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            R+ LTG+P+QN+L EY+ +++F    FLGS  +FR  F+N I  G+  N++        +
Sbjct: 391  RVILTGTPIQNDLSEYFSLLNFANPNFLGSKVDFRKNFENAIIRGRDANASDAFQAECEK 450

Query: 964  RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS 1023
            +   L   +  F+ R   +++ K LP K   V+   LS  Q  LY+ F          +S
Sbjct: 451  KLKELGNLVTKFIIRRTNDLLSKYLPVKYEHVVFCGLSEFQLSLYRLF----------IS 500

Query: 1024 NEKIRKSFFAGYQA--------LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNV 1075
            + +I K+   G ++        L ++ NHP +L L  D                      
Sbjct: 501  SPEI-KALLRGTESQPLKAINMLKKLCNHPQLLNLPDD---------------------- 537

Query: 1076 VIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMG 1134
            + G      +DF  G N  G   +    +L         D+ GK ++L   L  M +   
Sbjct: 538  LRGSDHLIPDDF-SGSNSSG---RGKTQNL-------RCDWGGKFIVLERFLHQMRTTTN 586

Query: 1135 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 1194
            DK ++ S    TLDL E    KL R  K G        ++RLDG    ++RQKLV++FN 
Sbjct: 587  DKIVLISNYTQTLDLFE----KLCRSKKYG--------YFRLDGTMSITKRQKLVDQFNN 634

Query: 1195 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYR 1254
            P  K     L+S++AG  GINL  ANR+I+ D  WNP  D QA+ R WR GQ K  F YR
Sbjct: 635  PEGKEF-IFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYR 693

Query: 1255 LMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEFGDD 1303
             ++ GT+EEKI++RQ +K+ L++ VVD ++   R  S E +  LF F ++
Sbjct: 694  FISTGTIEEKIFQRQASKQALSSAVVDEKEDAERHFSLEALRQLFLFKEN 743


>gi|195470937|ref|XP_002087763.1| GE14966 [Drosophila yakuba]
 gi|194173864|gb|EDW87475.1| GE14966 [Drosophila yakuba]
          Length = 772

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 183/603 (30%), Positives = 296/603 (49%), Gaps = 100/603 (16%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +  ++T +
Sbjct: 140  LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 191

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 832
            R        +  A++V+P +++ NW++EF KW    L   P+     E+  R      + 
Sbjct: 192  RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMT 251

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
              R    V LI Y  FR            +  EI    + G  +++CDE H +KN+   T
Sbjct: 252  SSRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 297

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
             QAL  +K +RR+ L+G+P+QN+L EYY +V+FV    LG++  F+  F++ I  GQ+T+
Sbjct: 298  YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 357

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ST  + +   +++  L   +   + R    ++ K LP K   VI  KL+ +Q  LY  FL
Sbjct: 358  STEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTSIQLELYTNFL 417

Query: 1013 DLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSREDAE 1063
                  +D+V       NEK   +  A    L +I +HP ++      ++KG+      E
Sbjct: 418  K-----SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKITAREKGF------E 466

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
            +S +    +YN       +++N  L GK                              +L
Sbjct: 467  NSQNVLPSNYNT------KDLNPELSGK-----------------------------FML 491

Query: 1124 LDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            LD +   + ++  DK ++ S    TLDL E    +L R  K G        + RLDG   
Sbjct: 492  LDFMLAAIRADGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMS 539

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
              +R K+V+RFN+P +      ++S++AG  G+NL  ANR+ + D  WNP  D QA+ R 
Sbjct: 540  IKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARV 598

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1300
            WR GQ KP + YR++A G++EEKI +RQ  K+ L++ ++D  +   +  +++++  LF F
Sbjct: 599  WRDGQKKPCYIYRMVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTF 658

Query: 1301 GDD 1303
              D
Sbjct: 659  DAD 661


>gi|119472846|ref|XP_001258430.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL 181]
 gi|119406582|gb|EAW16533.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL 181]
          Length = 835

 Score =  252 bits (643), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 193/625 (30%), Positives = 296/625 (47%), Gaps = 101/625 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   ++P  I  +L    + HQV G++F++      I K  +G     CI+A  M
Sbjct: 220  LKKKVESRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDKNANG-----CIMADGM 274

Query: 762  GLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF 817
            GLGKT Q I+ ++T ++ S   G   ++  +I  P +++ NW  E +KW   +   +  F
Sbjct: 275  GLGKTLQCISLMWTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELVKWLGKDA--ITPF 332

Query: 818  MLEDVSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICH 868
             ++   +  +AEL   + +W    G      V ++ Y   R                   
Sbjct: 333  AID--GKASKAELTSQIKQWAIASGRAVVRPVLIVSYETLRMY---------------VD 375

Query: 869  ALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            AL+D P  +L+CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F  
Sbjct: 376  ALKDSPIGLLLCDEGHRLKNKDSLTWTALNSLNVTRRVILSGTPIQNDLSEYFALLHFAN 435

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS +EFR RF+ PI  G+    T ED K  ++R   L   +  F+ R   +++ K 
Sbjct: 436  PNLLGSQNEFRKRFEIPILKGRDAAGTEEDRKKGDERLAELSGIVNKFIIRRTNDILSKY 495

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   LS  Q  LY  F+   ++      + S              L ++ NH
Sbjct: 496  LPIKYEHVVFCNLSRFQLDLYNHFIQSPEIKSLLRGKGSQP------LKAIGILKKLCNH 549

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L LT+D         ED    E                   +G++ D    K W   
Sbjct: 550  PDLLDLTRDLPGCEHTFPEDYVPPEA------------------RGRDRD---IKSW--- 585

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    
Sbjct: 586  -----------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRGY 630

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    ++RQKLV++FN P  +     L+S++AG  G+NL  ANR++
Sbjct: 631  GSL--------RLDGTMNINKRQKLVDKFNNPDGEEF-VFLLSSKAGGCGLNLIGANRLV 681

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  
Sbjct: 682  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSA 741

Query: 1283 QQVHRTISKEEMLHLFEFGDDENPD 1307
            + V R  S E +  LF+F  +   D
Sbjct: 742  EDVERHFSLESLRELFQFKPETRSD 766


>gi|292630953|sp|B4NXB8.2|RAD54_DROYA RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=Protein okra
          Length = 784

 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 183/603 (30%), Positives = 296/603 (49%), Gaps = 100/603 (16%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +  ++T +
Sbjct: 152  LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 832
            R        +  A++V+P +++ NW++EF KW    L   P+     E+  R      + 
Sbjct: 204  RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMT 263

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
              R    V LI Y  FR            +  EI    + G  +++CDE H +KN+   T
Sbjct: 264  SSRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
             QAL  +K +RR+ L+G+P+QN+L EYY +V+FV    LG++  F+  F++ I  GQ+T+
Sbjct: 310  YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            ST  + +   +++  L   +   + R    ++ K LP K   VI  KL+ +Q  LY  FL
Sbjct: 370  STEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTSIQLELYTNFL 429

Query: 1013 DLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSREDAE 1063
                  +D+V       NEK   +  A    L +I +HP ++      ++KG+      E
Sbjct: 430  K-----SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKITAREKGF------E 478

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
            +S +    +YN       +++N  L GK                              +L
Sbjct: 479  NSQNVLPSNYNT------KDLNPELSGK-----------------------------FML 503

Query: 1124 LDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
            LD +   + ++  DK ++ S    TLDL E    +L R  K G        + RLDG   
Sbjct: 504  LDFMLAAIRADGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMS 551

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
              +R K+V+RFN+P +      ++S++AG  G+NL  ANR+ + D  WNP  D QA+ R 
Sbjct: 552  IKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARV 610

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1300
            WR GQ KP + YR++A G++EEKI +RQ  K+ L++ ++D  +   +  +++++  LF F
Sbjct: 611  WRDGQKKPCYIYRMVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTF 670

Query: 1301 GDD 1303
              D
Sbjct: 671  DAD 673


>gi|320039340|gb|EFW21274.1| SNF2 family domain-containing protein [Coccidioides posadasii str.
            Silveira]
          Length = 797

 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 192/614 (31%), Positives = 294/614 (47%), Gaps = 97/614 (15%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            V E+ +  V I   ++  L+ HQV G++F++      I    +G     CI+A  MGLGK
Sbjct: 186  VEERPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANG-----CIMADEMGLGK 240

Query: 766  TFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            T Q I  L+T ++ S   G   ++  +I  P  ++ NW  E +KW   +   +  F+++ 
Sbjct: 241  TLQCITLLWTLLKQSPEAGKPTVQKVVIACPATLVGNWANELVKWLGKDA--VNPFVID- 297

Query: 822  VSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
              +  +AEL   L +W    G      V ++ Y   R L+ G+              L++
Sbjct: 298  -GKASKAELTSQLRQWAIASGRQVVRPVLIVSYETLR-LNVGE--------------LKE 341

Query: 873  GP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             P  +L+CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EYY +++F   G L
Sbjct: 342  TPIGLLLCDEGHRLKNGESQTFTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVL 401

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS  EF  RF+ PI  G+  + T E+ K  ++    L   +  F+ R   +++ K LP K
Sbjct: 402  GSRSEFHKRFEMPILRGRDADGTEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVK 461

Query: 992  TVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
               V+   L+P Q  LY  F+   D+      + S              L ++ NHP +L
Sbjct: 462  YEHVVFCNLAPFQMDLYNHFIQSPDIKSLLRGKGSQP------LKAIGILKKLCNHPDLL 515

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
             L+ D     +   +D    E                   +G++ D    K W       
Sbjct: 516  NLSADLPGSEQLFPDDYVPPEG------------------RGRDRD---VKSW------- 547

Query: 1109 HTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
                   YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    G L 
Sbjct: 548  -------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRGYGSL- 595

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
                   RLDG     +RQKLV+RFN+P  +     L+S++AG  GINL  ANR+++ D 
Sbjct: 596  -------RLDGTMTVKKRQKLVDRFNDPDGEEF-VFLLSSKAGGCGINLVGANRLVLFDP 647

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVH 1286
             WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  + V 
Sbjct: 648  DWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCVVDSAEDVE 707

Query: 1287 RTISKEEMLHLFEF 1300
            R  S + +  LF+F
Sbjct: 708  RHFSLDSLRELFQF 721


>gi|303311053|ref|XP_003065538.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735 delta
            SOWgp]
 gi|240105200|gb|EER23393.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735 delta
            SOWgp]
          Length = 799

 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 192/614 (31%), Positives = 294/614 (47%), Gaps = 97/614 (15%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            V E+ +  V I   ++  L+ HQV G++F++      I    +G     CI+A  MGLGK
Sbjct: 188  VEERPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANG-----CIMADEMGLGK 242

Query: 766  TFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            T Q I  L+T ++ S   G   ++  +I  P  ++ NW  E +KW   +   +  F+++ 
Sbjct: 243  TLQCITLLWTLLKQSPEAGKPTVQKVVIACPATLVGNWANELVKWLGKDA--VNPFVID- 299

Query: 822  VSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
              +  +AEL   L +W    G      V ++ Y   R L+ G+              L++
Sbjct: 300  -GKASKAELTSQLRQWAIASGRQVVRPVLIVSYETLR-LNVGE--------------LKE 343

Query: 873  GP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             P  +L+CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EYY +++F   G L
Sbjct: 344  TPIGLLLCDEGHRLKNGESQTFTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVL 403

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS  EF  RF+ PI  G+  + T E+ K  ++    L   +  F+ R   +++ K LP K
Sbjct: 404  GSRSEFHKRFEMPILRGRDADGTEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVK 463

Query: 992  TVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
               V+   L+P Q  LY  F+   D+      + S              L ++ NHP +L
Sbjct: 464  YEHVVFCNLAPFQMDLYNHFIQSPDIKSLLRGKGSQP------LKAIGILKKLCNHPDLL 517

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
             L+ D     +   +D    E                   +G++ D    K W       
Sbjct: 518  NLSADLPGSEQLFPDDYVPPEG------------------RGRDRD---VKSW------- 549

Query: 1109 HTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
                   YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    G L 
Sbjct: 550  -------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRGYGSL- 597

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
                   RLDG     +RQKLV+RFN+P  +     L+S++AG  GINL  ANR+++ D 
Sbjct: 598  -------RLDGTMTVKKRQKLVDRFNDPDGEEF-VFLLSSKAGGCGINLVGANRLVLFDP 649

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVH 1286
             WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  + V 
Sbjct: 650  DWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCVVDSAEDVE 709

Query: 1287 RTISKEEMLHLFEF 1300
            R  S + +  LF+F
Sbjct: 710  RHFSLDSLRELFQF 723


>gi|444316964|ref|XP_004179139.1| hypothetical protein TBLA_0B08040 [Tetrapisispora blattae CBS 6284]
 gi|387512179|emb|CCH59620.1| hypothetical protein TBLA_0B08040 [Tetrapisispora blattae CBS 6284]
          Length = 955

 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 181/568 (31%), Positives = 275/568 (48%), Gaps = 85/568 (14%)

Query: 754  GCILAHTMGLGKTFQVIAFLYTAMRSVNLGLR---TALIVTPVNVLHNWKQEFMKWR-PS 809
            GCI+A  MGLGKT Q I  ++T +R    G R     +IV P ++++NW  E +KW  P 
Sbjct: 386  GCIMADEMGLGKTLQCITLMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPG 445

Query: 810  ELKPLRVFMLEDV---SRDRRAELLAKW-RAKG-----GVFLIGYTAFRNLSFGKHVKDR 860
             L PL +   +     S    +E +  W +AKG      V +I Y   R           
Sbjct: 446  TLSPLAIDGKKSSLMSSNSTVSEAIRAWGQAKGRNIVKPVLIISYETLR----------- 494

Query: 861  NMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
               R +         +++ DE H +KN  + T  AL  + C RR+ L+G+P+QN+L EY+
Sbjct: 495  ---RNVDQLKNTEVGLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYF 551

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
             +++F   G LG+  EFR  ++ PI   +  ++T +++    Q+   L   +  F+ R  
Sbjct: 552  ALLNFSNPGLLGTRLEFRKNYEIPILRSRDADATDKEIAKGTQQLTQLSNIVSKFIIRRT 611

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQA 1037
             +++ K LP K   VI V L P QR LYKRF+   D+    N    ++ ++         
Sbjct: 612  NDILSKYLPCKYEHVIFVNLKPFQRELYKRFVKSRDIKKVVNGVNGSQPLK-----AIGL 666

Query: 1038 LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
            L ++ NHP +L L         ED  +S   ++ D            +DF    N     
Sbjct: 667  LKKLCNHPNLLNL---------EDELNSVMTDDFDI----------PDDFNMNGNSRTI- 706

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSK 1156
                           + +YSGK  +L   L  + +   DK ++ S    TLDLIE    K
Sbjct: 707  ---------------QTEYSGKFSILERFLHQIKTKSDDKIVLISNYTQTLDLIE----K 747

Query: 1157 LPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
            + R    G L        RLDG    ++RQKLV+RFN+P  +     L+S++AG  GINL
Sbjct: 748  MCRNKHYGVL--------RLDGTMSINKRQKLVDRFNDPEGQEF-IFLLSSKAGGCGINL 798

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              ANR+I++D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K  L+
Sbjct: 799  IGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLS 858

Query: 1277 ARVVD-RQQVHRTISKEEMLHLFEFGDD 1303
            + VVD ++ V R  S + +  LF+  ++
Sbjct: 859  SCVVDAKEDVERLFSADNLRQLFQLNEN 886


>gi|429851172|gb|ELA26385.1| DNA repair and recombination protein rad54 [Colletotrichum
            gloeosporioides Nara gc5]
          Length = 806

 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 192/627 (30%), Positives = 299/627 (47%), Gaps = 97/627 (15%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++   E  R+P  I  +L    + HQ+ G++FM+  +   I      +K  GCI+
Sbjct: 191  ILGIKKKVEGEHPRVPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMIE-----EKANGCIM 245

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LK 812
            A  MGLGKT Q I  L+T ++ S + G   ++ A++  P +++ NW  E +KW  ++ + 
Sbjct: 246  ADEMGLGKTLQCITLLWTLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAIT 305

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      E+++R  R   +A  R+    V ++ Y   R N+   KH K         
Sbjct: 306  PFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI-------- 357

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
                    +++CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F  
Sbjct: 358  -------GLMLCDEGHRLKNGDSQTFSALNNLNVTRRVILSGTPIQNDLSEYFALISFAN 410

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS  EFR RF+ PI  G+  +++  D K  ++    L   +  F+ R   +++ K 
Sbjct: 411  PDLLGSRLEFRKRFELPILRGRDADASEADRKKGDECLSELLGIVNKFIIRRTNDILSKY 470

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   L+P Q  LY  F+    +      + S              L ++ NH
Sbjct: 471  LPVKYEHVVFCNLAPFQLDLYNYFITSPSIQALLRGKGSQP------LKAINILKKLCNH 524

Query: 1045 PGILQLTKDKGYPSRED--AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
            P +L L  D   P  E+   ED    E                   +G++ D    K W 
Sbjct: 525  PDLLNLGDD--LPGSENCYPEDYVPKE------------------ARGRDRD---IKPW- 560

Query: 1103 NDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG 1161
                         YSGKM +L  +L  +  +  DK ++ S    TLDL E    KL R  
Sbjct: 561  -------------YSGKMQVLDRMLARIRQDTNDKIVLISNYTSTLDLFE----KLCRSR 603

Query: 1162 KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
              G L        RLDG    ++RQKLV++FN P  +     L+S++AG  G+NL  ANR
Sbjct: 604  AYGCL--------RLDGTMNVNKRQKLVDKFNNPEGEEF-VFLLSSKAGGCGLNLIGANR 654

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            +++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD
Sbjct: 655  LVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVD 714

Query: 1282 R-QQVHRTISKEEMLHLFEFGDDENPD 1307
              + V R  S + +  LF++    N D
Sbjct: 715  SAEDVERHFSLDSLRELFQYRPGTNSD 741


>gi|448116169|ref|XP_004202990.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
 gi|359383858|emb|CCE79774.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
          Length = 1116

 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 180/615 (29%), Positives = 284/615 (46%), Gaps = 93/615 (15%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            ++ R+P  I   L  +Q   ++++WE   Q            G I+   MGLGKT QVI+
Sbjct: 304  DSFRLPGDIYPSLFDYQKTCVQWLWELYTQKT----------GGIIGDEMGLGKTIQVIS 353

Query: 772  FLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELL 831
            F+     S  L     LIV P  VL+ W  EF +W P    PLR  +L  +       L+
Sbjct: 354  FIAGLHYSKRLE-DPVLIVVPATVLNQWVNEFHRWWP----PLRCVILHSIGSGMNKALI 408

Query: 832  AKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC------------ 879
            +K      +         N S  K  ++   A++I  ++     IL+             
Sbjct: 409  SKEEKMEELLENADPFSVNKSSLKSYENELKAKDIVDSVFQKGHILITTYVGLRIYSKYI 468

Query: 880  ----------DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
                      DE H I+N  ++ +   KQ+K   R+ L+G+P+QNNL+E + + DFV  G
Sbjct: 469  LPRKWGYAILDEGHKIRNPDSEVSLTCKQIKTYNRVILSGTPIQNNLIELWSLFDFVFPG 528

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP 989
             LG+   F+ +F  PI  G + N+++  V+   + + IL + +  ++ R   + V +DLP
Sbjct: 529  RLGTLPVFQQQFAVPINMGGYANASNVQVQTGYKCAVILRDLISPYLLRRLKSDVARDLP 588

Query: 990  PKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ 1049
             K   V+ VKL+  Q++LY++FLD    + D  +  K +++   G   L +I NHP ++ 
Sbjct: 589  KKNEMVLFVKLTEYQQQLYEKFLD----SEDVSAILKGKRNVLMGVDILRKICNHPDLI- 643

Query: 1050 LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEH 1109
                       D +  S   N +Y       PR                           
Sbjct: 644  -----------DRDILSHRRNYNYG-----DPRK-------------------------- 661

Query: 1110 TYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKK 1169
                   SGK+ +L ++L +    G ++L+F Q+   LD++E ++  L     +G     
Sbjct: 662  -------SGKLQVLKNLLQLWKKEGHRTLLFCQTRQMLDILEKFVGNLKSISDEGDDIDG 714

Query: 1170 GKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
              ++ R+DG T  + RQ LV+ FN   N      L++T+ G LGINL  A+RVII D  W
Sbjct: 715  KFNYLRMDGSTPIAVRQSLVDTFNN--NNYYHVFLLTTKVGGLGINLTGADRVIIYDPDW 772

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTI 1289
            NP+ D+QA  RAWR GQ K +  YRLM  G++EEKIY RQ+ K  L  +++   +  R  
Sbjct: 773  NPSTDIQARERAWRLGQKKDITIYRLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQRRFF 832

Query: 1290 SKEEMLHLFEFGDDE 1304
               ++  LF  GD E
Sbjct: 833  RMNDLHDLFSLGDPE 847


>gi|403294498|ref|XP_003938220.1| PREDICTED: uncharacterized protein LOC101030049 [Saimiri boliviensis
            boliviensis]
          Length = 1550

 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 186/634 (29%), Positives = 283/634 (44%), Gaps = 120/634 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G +F++ + I           G GCIL   MGLGKT QVI+FL  
Sbjct: 116  IPYTINRYLRDYQREGAQFLYGHYIH----------GRGCILGDDMGLGKTVQVISFLAA 165

Query: 776  AMR------------------------SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                         S +   +  LIV P++VL+NWK E   W     
Sbjct: 166  VLHKKGTREDIENNMPEFLLRSMKKEPSSSTAKKMFLIVAPLSVLYNWKDELDTW----- 220

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  + L  Y   R            +  +  ++L+
Sbjct: 221  GYFRVTVLHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 266

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 267  WS--AIIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 324

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS+  F+ +F +P+E+GQ   +T  ++    +    L +++ G+  R    ++K  LP K
Sbjct: 325  GSNSYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKK 384

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 385  EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCSSGRKRRNCCYKTNSHGETVKT 444

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
             + +    L ++ NH  +LQ            A  +S  +      +  +      DF+Q
Sbjct: 445  LYLSYLTVLQKVANHVALLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 492

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD+
Sbjct: 493  KTKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 540

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            ++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST A
Sbjct: 541  LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNVCLVSTMA 586

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQ
Sbjct: 587  GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 646

Query: 1270 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            V K+ L   VV  +   R       SKE    LF
Sbjct: 647  VYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 680


>gi|121700154|ref|XP_001268342.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1]
 gi|119396484|gb|EAW06916.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1]
          Length = 682

 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 191/622 (30%), Positives = 292/622 (46%), Gaps = 99/622 (15%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            V  + +  V I   ++  L+ HQV G++F++      I K  +G     CI+A  MGLGK
Sbjct: 71   VESRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDKNANG-----CIMADGMGLGK 125

Query: 766  TFQVIAFLYTAMR----SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRVFMLE 820
            T Q I+ ++T ++    +    ++  +I  P +++ NW  E +KW   + + P  V    
Sbjct: 126  TLQCISLMWTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELVKWLGKDAVTPFAV---- 181

Query: 821  DVSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               +  +AEL   + +W    G      V ++ Y   R                   AL+
Sbjct: 182  -DGKVPKAELTSQIKQWAIASGRSVVRPVLIVSYETLRMY---------------VDALK 225

Query: 872  DGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
            D P  +L+CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F     
Sbjct: 226  DSPIGLLLCDEGHRLKNKESLTWTALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNL 285

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 990
            LGS +EFR RF+ PI  G+    T ED K  ++R   L   +  F+ R   +++ K LP 
Sbjct: 286  LGSQNEFRKRFEIPILKGRDAAGTEEDRKKGDERLLELSGIVNKFIIRRTNDILSKYLPV 345

Query: 991  KTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGI 1047
            K   V+   LS  Q  LY  F+   ++      + S              L ++ NHP +
Sbjct: 346  KYEHVVFCNLSQFQLGLYNHFIQSPEIKSLLRGKGSQP------LKAIGLLKKLCNHPDL 399

Query: 1048 LQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
            L L++D         ED    E                   +G++ D    K W      
Sbjct: 400  LDLSRDLPGCEHTYPEDYVPPEA------------------RGRDRD---IKSW------ 432

Query: 1108 EHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1166
                    YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    G L
Sbjct: 433  --------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRGYGSL 480

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
                    RLDG    ++RQKLV++FN+P N      L+S++AG  G+NL  ANR+++ D
Sbjct: 481  --------RLDGTMTVNKRQKLVDKFNDP-NGEEFVFLLSSKAGGCGLNLIGANRLVLFD 531

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQV 1285
              WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  + V
Sbjct: 532  PDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDV 591

Query: 1286 HRTISKEEMLHLFEFGDDENPD 1307
             R  S E +  LF+F  +   D
Sbjct: 592  ERHFSLESLRELFQFKPETRSD 613


>gi|47575794|ref|NP_001001241.1| RAD54-like [Xenopus (Silurana) tropicalis]
 gi|45708870|gb|AAH67986.1| RAD54-like (S. cerevisiae) [Xenopus (Silurana) tropicalis]
          Length = 742

 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 190/619 (30%), Positives = 300/619 (48%), Gaps = 88/619 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            ++ V +EK    V +   +   L+ HQ  G++F+WE +  + R++ SG  G   I+A  M
Sbjct: 129  LLKVDKEKVPVHVVVDPVLGKVLRPHQREGVKFLWECV--TGRRI-SGSHG--SIMADEM 183

Query: 762  GLGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFM 818
            GLGKT Q I  ++T +R        +  A++V P +++ NW  E  KW    ++PL +  
Sbjct: 184  GLGKTLQCITLIWTLLRQSPDAKPEIEKAVVVCPSSLVKNWYNEVSKWLGGRIQPLAIDG 243

Query: 819  LEDVSRDRRAELLAK---WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPD 875
                  D++          R    + +I Y  FR            +  E+ H    G  
Sbjct: 244  GSKEEIDKKLSGFMNQHGMRVPSAILIISYETFR------------LHAEVLHRGSVG-- 289

Query: 876  ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
            +++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ 
Sbjct: 290  LVICDEGHRLKNSENQTYQALNSLNTVRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQ 349

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM----NVVKKDLPPK 991
            EF+ RF+ PI  G+  ++++ D     Q+     ++L G V R  +    +++ K LP K
Sbjct: 350  EFKKRFEIPILKGRDADASAAD----RQKGEEKLKELIGVVNRCLIRRTSDILSKYLPVK 405

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
               V+  +L+PLQ  LYK FL       D ++  KI  S  +   +L ++ NHP ++   
Sbjct: 406  IEQVVCCRLTPLQSELYKLFLKQAKPAED-LNEGKISVSSLSSITSLKKLCNHPSLIY-- 462

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
             +K     E  + +                  +N F  G +                   
Sbjct: 463  -EKCVEEEEGFQGA------------------LNLFPSGYSTKSV--------------- 488

Query: 1112 KELDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
             E   SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  
Sbjct: 489  -EPQLSGKMLVLDYILAVTRSTSSDKVVLVSNYTQTLDLFE-------------KLCRTR 534

Query: 1171 KDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
            +  Y RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  W
Sbjct: 535  RYLYVRLDGTMSIKKRAKIVERFNSPSSPEF-IFMLSSKAGGCGLNLIGANRLVMFDPDW 593

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRT 1288
            NP  D QA+ R WR GQ K  F YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R 
Sbjct: 594  NPANDEQAMARVWRDGQKKTCFIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERH 653

Query: 1289 ISKEEMLHLFEFGDDENPD 1307
             S  E+  LF   ++   D
Sbjct: 654  FSIGELKELFILNENTTSD 672


>gi|67967643|dbj|BAE00304.1| unnamed protein product [Macaca fascicularis]
          Length = 644

 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 188/604 (31%), Positives = 301/604 (49%), Gaps = 96/604 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 22   VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 76

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 77   WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSE--RIKIF---TVDQDHKVE 131

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 132  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 175

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 176  AIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 235

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   VI  +   LQ  LY
Sbjct: 236  REPSASEEEKELGERRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELY 295

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 296  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 340

Query: 1062 AEDSSSDENMD---YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
             E S+ D+N +   Y  ++   P + N  L       F +K+                SG
Sbjct: 341  KECSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------SG 377

Query: 1119 KMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            K+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + RL
Sbjct: 378  KLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNVL------------QEVCKRHGYAYTRL 425

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG+T  S+RQ++V+ FN   +  V   L+S++AG +G+NL   + +I+ D  WNP  D+Q
Sbjct: 426  DGQTPISQRQQIVDGFNSQ-HSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQ 484

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEM 1294
            A+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE+
Sbjct: 485  AMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEEL 544

Query: 1295 LHLF 1298
             +LF
Sbjct: 545  KNLF 548


>gi|332238364|ref|XP_003268366.1| PREDICTED: DNA repair and recombination protein RAD54B [Nomascus
            leucogenys]
          Length = 911

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 187/605 (30%), Positives = 300/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   V+  +   LQ  LY
Sbjct: 500  REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  ++   P + N  L       F +K+                S
Sbjct: 605  KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 641

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + R
Sbjct: 642  GKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 689

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +  V   L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 690  LDGQTPISQRQQIVDGFNSQ-HSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 748

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE
Sbjct: 749  QAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEE 808

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 809  LKNLF 813


>gi|389748911|gb|EIM90088.1| SNF2 family domain-containing protein [Stereum hirsutum FP-91666 SS1]
          Length = 825

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 193/620 (31%), Positives = 306/620 (49%), Gaps = 105/620 (16%)

Query: 714  VRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
             R+P  I  +L    + HQV G++F++      + + +      GCI+A  MGLGKT Q 
Sbjct: 211  TRVPVVIDPRLCKVLRPHQVEGVKFLYRCTTGMVVEGQ-----YGCIMADEMGLGKTLQC 265

Query: 770  IAFLYTAM----RSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRVFMLEDVSR 824
            IA L+T +    RS    L   +I  P +++ NW  E  KW   + + P+ V       +
Sbjct: 266  IALLWTLLKQSPRSGKGTLEKCIIACPSSLVKNWANELAKWLGKDTITPMAV-----DGK 320

Query: 825  DRRAELLAK---WRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPD 875
              +AELL +   W A  G      V ++ Y   R L+               +  Q G  
Sbjct: 321  GGKAELLQRVERWVAASGRNVTQPVMIVSYETLRTLTV------------YLNGCQIG-- 366

Query: 876  ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
            +L+CDE H +KN+ + T QAL  +  +RR+ L+G+P+QN+L EY+ +++F     LG+ +
Sbjct: 367  LLLCDEGHRLKNSESLTFQALDAINVKRRVILSGTPIQNDLSEYFSLLNFANPNLLGTKN 426

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFV 995
            +FR  F+N I  G+  ++T +D     ++   L E +  F+ R   +++ K LP K   V
Sbjct: 427  DFRKNFENIIIRGRDADATDKDKAECEKKLKELGELVSKFIIRRTNDLLSKYLPVKYEQV 486

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA--------LAQIWNHPGI 1047
            +   LS  Q +LY+ F          +S+ +I K+   G ++        L ++ NHP +
Sbjct: 487  VFCGLSDFQLQLYRLF----------ISSPEI-KALLRGAESQPLKAINILKKLCNHPEL 535

Query: 1048 LQLTKD-KG--YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            L L +D +G  +   E    +  D N         KP+  +   +G  D G         
Sbjct: 536  LNLPQDLRGCDHLIPEGFCGAGDDSN---------KPKGGS---RGGRDAG--------- 574

Query: 1105 LLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
              + HT    ++SGK ++L   L  + +   DK ++ S    TLD+ E    K+ R  K 
Sbjct: 575  -QNVHT----EWSGKFIVLERFLHRLHTETNDKIVLISNYTQTLDIFE----KMLRSKKY 625

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G        ++RLDG     +RQKLV++FN P  K     L+S++AG  GINL  ANR+I
Sbjct: 626  G--------YFRLDGTMNIPKRQKLVDQFNNPEGKEF-VFLLSSKAGGCGINLIGANRLI 676

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-R 1282
            + D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ +K+ L++ VVD +
Sbjct: 677  LFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQASKQALSSAVVDEK 736

Query: 1283 QQVHRTISKEEMLHLFEFGD 1302
            +   R  S + +  LF F +
Sbjct: 737  EDAERHFSIDSLRQLFLFNE 756


>gi|392862807|gb|EAS36523.2| SNF2 family domain-containing protein [Coccidioides immitis RS]
          Length = 797

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 192/614 (31%), Positives = 294/614 (47%), Gaps = 97/614 (15%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            V E+ +  V I   ++  L+ HQV G++F++      I    +G     CI+A  MGLGK
Sbjct: 186  VEERPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANG-----CIMADEMGLGK 240

Query: 766  TFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            T Q I  L+T ++ S   G   ++  +I  P  ++ NW  E +KW   +   +  F+++ 
Sbjct: 241  TLQCITLLWTLLKQSPEAGKPTVQKVVIACPATLVGNWANELVKWLGKDA--VNPFVID- 297

Query: 822  VSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
              +  +AEL   L +W    G      V ++ Y   R L+ G+              L++
Sbjct: 298  -GKASKAELTSQLRQWAIASGRQVVRPVLIVSYETLR-LNVGE--------------LKE 341

Query: 873  GP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             P  +L+CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EYY +++F   G L
Sbjct: 342  TPIGLLLCDEGHRLKNGESQTFTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVL 401

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS  EF  RF+ PI  G+  + T E+ K  ++    L   +  F+ R   +++ K LP K
Sbjct: 402  GSRSEFHKRFEMPILRGRDADGTEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVK 461

Query: 992  TVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
               V+   L+P Q  LY  F+   D+      + S              L ++ NHP +L
Sbjct: 462  YEHVVFCNLAPFQMDLYNHFIQSPDIKSLLRGKGSQP------LKAIGILKKLCNHPDLL 515

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
             L+ D     +   +D    E                   +G++ D    K W       
Sbjct: 516  NLSADLPGSEQFFPDDYVPPEG------------------RGRDRD---VKSW------- 547

Query: 1109 HTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
                   YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    G L 
Sbjct: 548  -------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRGYGSL- 595

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
                   RLDG     +RQKLV+RFN+P  +     L+S++AG  GINL  ANR+++ D 
Sbjct: 596  -------RLDGTMTVKKRQKLVDRFNDPDGEEF-VFLLSSKAGGCGINLVGANRLVLFDP 647

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVH 1286
             WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  + V 
Sbjct: 648  DWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCVVDSAEDVE 707

Query: 1287 RTISKEEMLHLFEF 1300
            R  S + +  LF+F
Sbjct: 708  RHFSLDSLRELFQF 721


>gi|453084606|gb|EMF12650.1| DNA repair and recombination protein RAD54 [Mycosphaerella populorum
            SO2202]
          Length = 714

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 190/624 (30%), Positives = 302/624 (48%), Gaps = 101/624 (16%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    VV E+ +  V I   ++  L+ HQV G++F++      I          GCI+
Sbjct: 96   ILGIKKVVVDERPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDA-----NAEGCIM 150

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q I  ++T ++ S + G   ++  +I  P +++ NW  E +KW     ++
Sbjct: 151  ADEMGLGKTLQCITLMWTLLKQSPDAGKSTIQKCIIACPASLVRNWANELVKWLGEGAIE 210

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREI 866
            P  V      S+++  + +  W +  G      V +I Y   R                 
Sbjct: 211  PFAVD--GKASKEQMTQQMRAWASASGRAVVRPVLIISYETLR---------------LY 253

Query: 867  CHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
               L++ P  +++CDE H +KN+ + T  AL  +  ++R+ L+G+P+QN+L EY+ +++F
Sbjct: 254  VDELRNTPIGLMLCDEGHRLKNSESQTYMALAGLNVKKRVILSGTPIQNDLSEYFSLLNF 313

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
               G+LG+  +FR +F+NPI  G+  + T  D +  ++R   L   +  F+ R   +++ 
Sbjct: 314  ANPGYLGTQADFRKQFENPILRGRDADGTEADRQKGDERLKELLTLVNKFIIRRTNDILS 373

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            K LP K   V+   L+P Q  LY  F+   ++      + S              L ++ 
Sbjct: 374  KYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQSLLRGKGSQP------LKAIGLLKKLC 427

Query: 1043 NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
            NHP +L L  D             S+E+     V    P++     +G++          
Sbjct: 428  NHPDLLNLPDDL----------PGSEEHFPEEYV----PKDQ----RGRD---------- 459

Query: 1103 NDLLHEHTYKELD--YSGKMVLL---LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
                     +E++  YSGKM +L   L  + M SN  DK ++ S    TLD+ E    KL
Sbjct: 460  ---------REVNPVYSGKMQVLDRMLARIRMDSN--DKIVLISNYTQTLDVFE----KL 504

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
             R    G L        RLDG    ++RQKLV++FN+P N      L+S++AG  G+NL 
Sbjct: 505  CRSRSYGCL--------RLDGTMNVNKRQKLVDKFNDP-NGAEFVFLLSSKAGGCGLNLI 555

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANR+I+ D  WNP  D QA+ R WR GQ K  F YR MA GT+EEKI++RQ  K+ L++
Sbjct: 556  GANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFMAAGTIEEKIFQRQSHKQALSS 615

Query: 1278 RVVDR-QQVHRTISKEEMLHLFEF 1300
             VVD  + V R  S E +  LF++
Sbjct: 616  CVVDSAEDVERHFSTESLRELFQY 639


>gi|134077689|emb|CAK45729.1| unnamed protein product [Aspergillus niger]
          Length = 846

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 193/626 (30%), Positives = 295/626 (47%), Gaps = 103/626 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   ++P  I  +L    + HQV G++F++      + K  +G     CI+A  M
Sbjct: 231  LKKKTEGRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNANG-----CIMADGM 285

Query: 762  GLGKTFQVIAFLYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSE-LKPLRV 816
            GLGKT Q I+ ++T ++ S   G+ T    +I  P +++ NW  E +KW   + + P  V
Sbjct: 286  GLGKTLQCISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAV 345

Query: 817  FMLEDVSRDRRAELLAK---WRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   +  + EL+++   W    G      V +I Y   R                  
Sbjct: 346  -----DGKASKTELISQMKQWAIASGRAIVRPVLIISYETLR---------------LYV 385

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              L+D P  +L+CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ ++ F 
Sbjct: 386  DTLRDSPIGLLLCDEGHRLKNKESLTWTALNGLNVQRRVILSGTPIQNDLSEYFALLHFA 445

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
                LGS +EFR RF+ PI  G+    T ED+K  ++R   L   +  F+ R   +++ K
Sbjct: 446  NPNLLGSQNEFRKRFELPILRGRDAAGTEEDLKKGDERLAELSGIVNKFIIRRTNDILSK 505

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
             LP K   V+   +S  Q  LYK F+   ++      + S              L ++ N
Sbjct: 506  YLPVKYEHVVFCNMSAFQLGLYKHFIQSPEIKSLLRGKGSQP------LKAIGLLKKLCN 559

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP +L L+ D         ED    E                   +G++ D    K W  
Sbjct: 560  HPDLLNLSNDLPGCEYTFPEDYVPPEA------------------RGRDRD---IKSW-- 596

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
                        YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R   
Sbjct: 597  ------------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRTRG 640

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
             G L        RLDG     +RQKLV++FN P  +     L+S++AG  G+NL  ANR+
Sbjct: 641  YGSL--------RLDGTMTVGKRQKLVDKFNNPDGEEF-VFLLSSKAGGCGLNLIGANRL 691

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            ++ D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD 
Sbjct: 692  VLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDS 751

Query: 1283 -QQVHRTISKEEMLHLFEFGDDENPD 1307
             + V R  S E +  LF+F  +   D
Sbjct: 752  AEDVERHFSLESLRELFQFKPETRSD 777


>gi|395537346|ref|XP_003770664.1| PREDICTED: DNA repair and recombination protein RAD54-like
            [Sarcophilus harrisii]
          Length = 822

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 185/609 (30%), Positives = 296/609 (48%), Gaps = 88/609 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            REK    V +   +S  L+ HQ  G++F+WE +  + R++       GCI+A  MGLGKT
Sbjct: 214  REKLPVHVVVDPILSKILRPHQREGVKFLWECV--TGRRIPGSH---GCIMADEMGLGKT 268

Query: 767  FQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   +  S
Sbjct: 269  LQCITLMWTLLRQSPESKPEIDKAVVVSPSSLVRNWSNEVHKWLGGRIQPLAI---DGGS 325

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            ++   + L  +      R    + +I Y  FR      H +          ALQ G   +
Sbjct: 326  KEEIDQKLGSFMNQRGSRVPSPILIISYETFR-----LHAE----------ALQRGSVGL 370

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ E
Sbjct: 371  VICDEGHRLKNSENQTYQALNSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQE 430

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+  +++    +   +R   L   +   + R   +++ K LP K   V+
Sbjct: 431  FKRHFELPILKGRDADASEAARQKGEERLRELVGIVNRCLIRRTSDILSKYLPVKIEQVV 490

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LY+RFL       + +   K+  S  +   +L ++ NHPG++       Y
Sbjct: 491  CCRLTPLQAELYRRFLQ-QAKPAEELREGKMSVSSLSSITSLKKLCNHPGLI-------Y 542

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                + E+  S                ++ F  G                +     E   
Sbjct: 543  EKCVEEEEGFSG--------------TLDLFPPG----------------YSCKSVEPQL 572

Query: 1117 SGKMVLLLDILTMCSNM-GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +      DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 573  SGKMLVLDYILAVTRRTSSDKVVLVSNYTQTLDLFE-------------KLCRLRRYLYV 619

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 620  RLDGTMSIKKRAKVVERFNNPSSPDF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 678

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 679  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGE 738

Query: 1294 MLHLFEFGD 1302
            +  LF   +
Sbjct: 739  LRELFTLNE 747


>gi|330801436|ref|XP_003288733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum]
 gi|325081209|gb|EGC34733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum]
          Length = 1544

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 182/591 (30%), Positives = 276/591 (46%), Gaps = 97/591 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  +IP  I   L  +QV G+R+++E   Q            G I+   MGLGKT Q++
Sbjct: 714  DENFKIPFDIYKNLFEYQVTGVRWLYELHCQEA----------GGIVGDEMGLGKTIQIV 763

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR-RAE 829
            +FL +   S  LG   ALIV P  +L NW +EF KW P    P RV +    S    + +
Sbjct: 764  SFLASLHYSRRLG-GPALIVAPATLLSNWVKEFHKWWP----PFRVGLFHSSSSSLSKDD 818

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
            ++ K  +KG + L  +   R            + ++I   L+   D ++ DE H I+N  
Sbjct: 819  IVKKIASKGHILLTTFEQIR------------IHQDIL--LEHHWDYVILDEGHKIRNPD 864

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
            A+ T + KQ +   RI L+GSP+QN L E + + DFV  G LG+   F+ +F  PI  G 
Sbjct: 865  AEVTLSCKQFQTCHRIILSGSPIQNKLTELWSLFDFVYPGKLGTLPIFKTQFSLPISVGG 924

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
              N++   V+   + +  L + +  ++ R     V K LP K   V+   L+  Q +LY 
Sbjct: 925  FANASPIQVQTAYKCAVALRDLISPYMLRRIKADVLKSLPSKNEQVLMCPLTNFQEKLYL 984

Query: 1010 RFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDE 1069
             FLD    +ND  S  + R++   G   L +I NHP IL +      P  ED        
Sbjct: 985  EFLD----SNDIKSVLEGRRNALYGIDILKKISNHPDILHMD-----PHDED-------- 1027

Query: 1070 NMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTM 1129
                      +P +                           Y  ++ S K+ ++  IL +
Sbjct: 1028 ----------RPED---------------------------YGNINRSAKLRVVDQILPL 1050

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
                GDK L+F Q+   LD++E Y+                 ++ R+DG T    RQ LV
Sbjct: 1051 WYKQGDKVLLFCQTRQMLDIVEAYIRN-----------STTFNYLRMDGTTSVKHRQSLV 1099

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            E FN  L++++   L++T+ G LG+NL  ANRVI+ D  WNP+ D QA  R +R GQ K 
Sbjct: 1100 EEFN--LDEKLFIFLLTTKVGGLGLNLTGANRVILFDPDWNPSTDTQARERVYRIGQKKS 1157

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            V  YRL+  GT+EEKIY RQ+ K+ L  +++   +  R    +    LF +
Sbjct: 1158 VTIYRLVTLGTIEEKIYHRQIYKQFLTNKILKDPRQKRFFKSKHFKELFTY 1208


>gi|361131939|gb|EHL03554.1| putative DNA repair and recombination protein RAD26 [Glarea
            lozoyensis 74030]
          Length = 1207

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 191/617 (30%), Positives = 292/617 (47%), Gaps = 117/617 (18%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            +++P  I   L  +Q  G++++ E   QS+          G I+   MGLGKT Q+I+FL
Sbjct: 417  IKLPGDIYPALFDYQKTGVQWLGELYSQSV----------GGIVGDEMGLGKTIQIISFL 466

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRDR 826
                 S  L  +  ++V P  VL  W  EF +W P    PLRV +L        +V R+ 
Sbjct: 467  AGLHYSKKL-TKPIIVVAPATVLRQWVNEFHRWWP----PLRVSILHSSGSGMLNVGREE 521

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA---------LQDGPDIL 877
            + E + +          G+T  +  S       + + R + H          LQ   D+L
Sbjct: 522  KYEEIDE-------MYTGHTT-KKPSKSSRSAQKIVDRVVEHGHVLVTTYAGLQTYADVL 573

Query: 878  --------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
                    V DE H I+N     T   K+++   R+ L+G+P+QNNL+E + + DFV   
Sbjct: 574  IPVEWDYAVLDEGHKIRNPNTGITIHCKELRTPNRVILSGTPMQNNLVELWSLFDFVFPM 633

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDL 988
             LG+   FR  F+ PI  G + N+T+  V    + +  L   +  ++ QR+ ++V   DL
Sbjct: 634  RLGTLVNFRQAFEVPIRLGGYANATNLQVLTATKCAETLKATISPYLLQRLKVDVAA-DL 692

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
            P K+  V+  KL+  QR  Y+ FL     T+  + N   RKS + G   L +I NHP +L
Sbjct: 693  PKKSEQVLFCKLTKPQREAYEMFLSSDEMTS--ILNHS-RKSLY-GIDILRKICNHPDLL 748

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
                                            PR     L+GK   G+    W N     
Sbjct: 749  D-------------------------------PR-----LRGK--PGY---KWGNP---- 763

Query: 1109 HTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK 1168
                  + SGKM ++  ++ M  NMG K+L+FSQ +  L++IE ++  L           
Sbjct: 764  ------NKSGKMQVVKALVQMWKNMGHKTLLFSQGVQMLNIIEEFIKSL----------- 806

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
             G ++ R+DG T   +RQ LV+RFN   +  +   L++T+ G LG+NL  ANRVII D  
Sbjct: 807  DGFNYLRMDGGTNVKDRQTLVDRFNN--DPDMHIFLLTTKVGGLGVNLTGANRVIIFDPD 864

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT 1288
            WNP+ D+QA  RAWR GQ K V  +RLM  GT+EEKIY RQ+ K+ L  +++   +  +T
Sbjct: 865  WNPSTDVQARERAWRLGQKKEVTIFRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQT 924

Query: 1289 ISKEEMLHLFEFGDDEN 1305
               +++  LF  G  E+
Sbjct: 925  FQMKDLYDLFSLGSTED 941


>gi|425777849|gb|EKV16005.1| DNA repair protein Rhp26/Rad26, putative [Penicillium digitatum
            PHI26]
 gi|425782618|gb|EKV20517.1| DNA repair protein Rhp26/Rad26, putative [Penicillium digitatum Pd1]
          Length = 1117

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 189/616 (30%), Positives = 287/616 (46%), Gaps = 108/616 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +  +R+P  IS  L  +Q +G++++WE   Q++          G I+   MGLGKT Q I
Sbjct: 319  DNGLRVPGDISRFLFPYQKIGVQWLWELHQQTV----------GGIIGDEMGLGKTIQAI 368

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
            ++L     S  L  + A+IV P  ++  W  EF +W P    P RV +L   S       
Sbjct: 369  SYLAALHHSKKL-TKPAIIVCPATLMKQWVNEFHRWWP----PFRVSILH--SSGSGMIN 421

Query: 831  LAKWRAKGGVF---LIGYTAFRNLSFGKHVKDRNMAR--EICH-------ALQDGPDILV 878
            L K  ++       ++G    R LS G+    R + R  E  H        LQ   D LV
Sbjct: 422  LGKESSRENALSSEMMGSRNSRQLSAGQKADKRIIKRVTEEGHVLVTTYSGLQSYADALV 481

Query: 879  --------CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
                     DE H I+N  A  T + K+++   RI L+G+P+QN+L++ + + DFV    
Sbjct: 482  DVEWGCAILDEGHKIRNPDAGITFSCKELRTPHRIILSGTPMQNSLVDLWSLFDFVFPMR 541

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLP 989
            LG+   F+N+F+ PI  G + ++++  V+   + +  L + +  ++ QR   +V   DLP
Sbjct: 542  LGNLVTFKNQFEIPIRQGGYASASNLQVQTAAKCAETLKDAISPYLLQRFKADVTS-DLP 600

Query: 990  PKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ 1049
             K+  VI  KL+ LQR +YKRFL     ++D  S  + +++   G   L +I NHP +  
Sbjct: 601  MKSEQVIFCKLTQLQRTIYKRFLG----SDDMKSIVRGKRNSLFGIDILRKISNHPDL-- 654

Query: 1050 LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEH 1109
               D    SR                                                E 
Sbjct: 655  --ADHALRSR------------------------------------------------EA 664

Query: 1110 TYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKK 1169
             Y + + SGKM +L  +L +  + G K+LVF+Q    LD+IE +L  L            
Sbjct: 665  DYGDAERSGKMKVLKGLLEVWRDTGHKTLVFTQGRLMLDIIEKFLGVL-----------G 713

Query: 1170 GKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
            G +  R+DG T   ERQ LV+ FN   N  +   L++TR G +G+NL  A+RVII D  W
Sbjct: 714  GFNSRRMDGTTPIKERQNLVDEFNN--NPEIHVFLLTTRVGGIGVNLTGADRVIIYDPDW 771

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTI 1289
            NP+ DLQA  RAWR GQ + V  +RLM  GT+EEKIY RQ+ K+ L  ++          
Sbjct: 772  NPSTDLQARERAWRLGQKRDVTIFRLMTKGTIEEKIYHRQIFKQFLTNKITRDPHQREGF 831

Query: 1290 SKEEMLHLFEFGDDEN 1305
               ++  LF   D+ +
Sbjct: 832  QLSDLYDLFTLTDEND 847


>gi|449508575|ref|XP_002191829.2| PREDICTED: DNA repair and recombination protein RAD54-like
            [Taeniopygia guttata]
          Length = 745

 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 187/620 (30%), Positives = 296/620 (47%), Gaps = 92/620 (14%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            + + ++K    V +   +S  L+ HQ  G++F+W+ +    R++       GCI+A  MG
Sbjct: 133  LKIDKDKAPVHVVVDPVLSRVLRPHQREGVKFLWDCVTS--RRIPGSH---GCIMADEMG 187

Query: 763  LGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML 819
            LGKT Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   
Sbjct: 188  LGKTLQCITLMWTLLRQSPDCKPEIEKAVVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGG 247

Query: 820  EDVSRDRRAELLAKWRAKGGV------FLIGYTAFRNLSFGKHVKDRNMAREICHA--LQ 871
                 DR+   L  + ++ GV       +I Y  FR                  HA  LQ
Sbjct: 248  SKEEIDRK---LVGFMSQHGVRVPSPILIISYETFR-----------------LHAEVLQ 287

Query: 872  DGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
             G   +++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G 
Sbjct: 288  KGSVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGI 347

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 990
            LG++ EF+  F+ PI  G+  +++  +     +R   L   +   + R   +++ K LP 
Sbjct: 348  LGTAQEFKRHFEMPILKGRDADASEAERHKGEERLKELISIVNRCLIRRTSDILSKYLPV 407

Query: 991  KTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQL 1050
            K   V+  +L+PLQ  LYK FL       + +   KI  S  +   +L ++ NHP ++  
Sbjct: 408  KIEQVVCCRLTPLQTELYKNFLK-QAKPVEELKEGKISVSSLSSITSLKKLCNHPALIY- 465

Query: 1051 TKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHT 1110
                         D   +E   +   +G  P             G+  K           
Sbjct: 466  -------------DKCVEEEEGFMGALGLFP------------SGYSTKS---------- 490

Query: 1111 YKELDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKK 1169
              E   SGKM++L  IL +  S   DK ++ S    TLDL E             KL + 
Sbjct: 491  -VEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFE-------------KLCRS 536

Query: 1170 GKDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
             +  Y RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  
Sbjct: 537  RRYLYVRLDGTMSIKKRAKIVERFNSPSSPEF-IFMLSSKAGGCGLNLIGANRLVMFDPD 595

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHR 1287
            WNP  D QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R
Sbjct: 596  WNPANDEQAMARVWRDGQKKMCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVER 655

Query: 1288 TISKEEMLHLFEFGDDENPD 1307
              S  E+  LF   +    D
Sbjct: 656  HFSLGELKELFTLNETTTSD 675


>gi|378732226|gb|EHY58685.1| DNA repair protein rhp54 [Exophiala dermatitidis NIH/UT8656]
          Length = 805

 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 186/627 (29%), Positives = 294/627 (46%), Gaps = 97/627 (15%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + +E   E  ++P  I  +L    + HQV G+RF++      +      +K  GCI+
Sbjct: 186  ILGIKKEVEGERPKVPVVIDPRLAKVLRPHQVEGVRFLYRCTTGLV-----DEKAKGCIM 240

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q I  ++T ++ S   G   +   +I  P +++ NW  E +KW       
Sbjct: 241  ADEMGLGKTLQCITLMWTLLKQSPEAGKPTIHKCIIACPASLVKNWANELVKWLGE--GA 298

Query: 814  LRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFR-NLSFGKHVKDRNMARE 865
            +  F ++   +++     L +W    G      V ++ Y + R N+   + VK       
Sbjct: 299  IHPFAIDGKATKEELTMQLKQWAMASGRSIARPVLIVSYESLRLNIEELRDVKI------ 352

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
                      +++CDE H +KN  ++T  AL  +   RR+ L+G+P+QN+L EYY ++DF
Sbjct: 353  ---------GLMLCDEGHRLKNAESETYMALTGLNVDRRVILSGTPIQNDLTEYYSLLDF 403

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
               G+LG+  +FR +F+ PI  G+    T  D +   + +  L   +  F+ R   +++ 
Sbjct: 404  ANPGYLGTKADFRKKFELPILRGRDAAGTDTDKQKGVEANAGLGSLVNKFLIRRTNDILS 463

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            K LP K   V+   L+P Q+ LY  F+   D+      + S              L ++ 
Sbjct: 464  KYLPVKYEHVVFCNLAPFQKDLYNHFIQSPDIKSLLRGKGSQP------LKAIGILKKLC 517

Query: 1043 NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
            NHP +L L KD     +   +D    E                   +G++ D    + W 
Sbjct: 518  NHPDLLDLEKDLPGSEKFWPDDYVPKEA------------------RGRDRD---VRSW- 555

Query: 1103 NDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG 1161
                         YSGK  +L  +L  +  +  DK ++ S    TLD+ E    KL R  
Sbjct: 556  -------------YSGKFAVLERMLARIRQDTNDKIVLISNYTQTLDVFE----KLCRSR 598

Query: 1162 KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
              G L        RLDG    ++RQKLV+RFN+P N      L+S++AG  GINL  ANR
Sbjct: 599  NYGCL--------RLDGTMNVNKRQKLVDRFNDP-NGEEFVFLLSSKAGGCGINLIGANR 649

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            +++ D  WNP  D QA+ R WR GQ K  F YR M  GT+EEKI++RQ  K+ L++ VVD
Sbjct: 650  LVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFMGTGTIEEKIFQRQSHKQALSSTVVD 709

Query: 1282 R-QQVHRTISKEEMLHLFEFGDDENPD 1307
              + V R  + + +  LF+F  +   D
Sbjct: 710  SAEDVERHFTLDSLRELFQFKPETKSD 736


>gi|332219863|ref|XP_003259077.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination protein
            RAD54-like [Nomascus leucogenys]
          Length = 747

 Score =  251 bits (640), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 189/605 (31%), Positives = 296/605 (48%), Gaps = 88/605 (14%)

Query: 707  REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 766
            +EK    V +   +S  L+ HQ  G++F+WE +  + R++       GCI+A  MGLGKT
Sbjct: 136  KEKLPVHVVVDPILSKVLRPHQREGVKFLWECV--TSRRIPGSH---GCIMADEMGLGKT 190

Query: 767  FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             Q I  ++T +R        +  A++V+P + + NW  E  KW    ++PL +   +  S
Sbjct: 191  LQCITLMWTLLRQSPECKPEIDKAVVVSPSSXVKNWYNEVGKWLGGRIQPLAI---DGGS 247

Query: 824  RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 876
            +D   + L  +      R    + +I Y  FR L  G               LQ G   +
Sbjct: 248  KDEIDQKLEGFMNQRGARVPSPILIISYETFR-LHVG--------------VLQKGSVGL 292

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HE
Sbjct: 293  VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K LP K   V+
Sbjct: 353  FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++        
Sbjct: 413  CCRLTPLQTELYKRFLR-QAKPEEELREGKMSVSSLSSITSLKKLCNHPALIH------- 464

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                   D   +E   +   +G     ++ F  G N                    E   
Sbjct: 465  -------DKCVEEEDGF---VGA----LDLFPPGYNSKTL----------------EPQL 494

Query: 1117 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1174
            SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y 
Sbjct: 495  SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  D
Sbjct: 542  RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 1293
             QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E
Sbjct: 601  EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660

Query: 1294 MLHLF 1298
            +  LF
Sbjct: 661  LKELF 665


>gi|410987472|ref|XP_004000025.1| PREDICTED: DNA repair and recombination protein RAD54B [Felis catus]
          Length = 911

 Score =  251 bits (640), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 191/602 (31%), Positives = 302/602 (50%), Gaps = 91/602 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R   SG    G ILA  MGLGKT Q I+ +
Sbjct: 287  VVIDPYLVYHLRPHQKEGILFLYECVM-GMRV--SGR--CGAILADEMGLGKTLQCISLI 341

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 342  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIF---PVDQDHKVE 396

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K+VK                D+L+CDE H +KN+
Sbjct: 397  EFIK-SPFYSVLIISYEMLLRSLDQIKNVKF---------------DLLICDEGHRLKNS 440

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 441  AIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 500

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY
Sbjct: 501  RQPSASEEEKELGEKRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELY 560

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   D                AL ++ NHP +L       + S + 
Sbjct: 561  RKLLNSQAVRFCLQGLLGD--------SPHLICIGALKKLCNHPCLL-------FNSIKG 605

Query: 1062 AEDSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKM 1120
             E SS+ DEN + ++  G     +N F    N   F +++                SGK+
Sbjct: 606  RECSSTWDENEERSLYEGL----VNVFPADYNPLMFTEEE----------------SGKL 645

Query: 1121 VLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
             +LL +L +   +   +K ++ S    TL+++            Q    + G  + RLDG
Sbjct: 646  QVLLKLLAVIRELRPTEKVVLVSNYTQTLNIL------------QEVCRRHGYAFTRLDG 693

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
            +T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+
Sbjct: 694  QTPVSQRQQIVDGFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAM 752

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLH 1296
             R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+ L+  VVD  +   H   S EE+ +
Sbjct: 753  SRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTKTSEHIQFSVEELKN 812

Query: 1297 LF 1298
            LF
Sbjct: 813  LF 814


>gi|198473012|ref|XP_001356143.2| GA17651 [Drosophila pseudoobscura pseudoobscura]
 gi|292630937|sp|Q29KH2.2|RAD54_DROPS RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=Protein okra
 gi|198139260|gb|EAL33203.2| GA17651 [Drosophila pseudoobscura pseudoobscura]
          Length = 782

 Score =  251 bits (640), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 187/607 (30%), Positives = 302/607 (49%), Gaps = 106/607 (17%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +A ++T +
Sbjct: 148  LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVALVWTLL 199

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELL--- 831
            +        +   +IV+P +++ NW++EF KW    +  L    +E  S++     L   
Sbjct: 200  KQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKENTVRALEQF 256

Query: 832  ---AKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               A  R    V LI Y  FR            +  EI    + G  +++CDE H +KN+
Sbjct: 257  SMNASTRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNS 302

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               T QAL  +K +RR+ L+G+P+QN+L EY+ +V+FV    LG++ +F+  F+N I  G
Sbjct: 303  DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRG 362

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            Q+ +ST ++     +++  L + +   + R    ++ K LP K   VI  KL+P+Q +LY
Sbjct: 363  QNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLY 422

Query: 1009 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 1059
              FL      +D+V        EK   +  A    L ++ +HP ++      ++KG+   
Sbjct: 423  TNFLK-----SDQVRRSLADCKEKASLTALADITTLKKLCSHPNLICEKIAAEEKGF--- 474

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
               E+S +   ++YN   GE    +N  L GK                   +K LD+   
Sbjct: 475  ---ENSQNILPINYNPK-GE----INPELSGK-------------------FKLLDFM-- 505

Query: 1120 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
                  +  + ++  DK ++ S    TLDL E    +L R  K G        + RLDG 
Sbjct: 506  ------LAAIRAHGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGT 547

Query: 1180 TESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
                +R K+V+RFN+P      C L  +S++AG  G+NL  ANR+ + D  WNP  D QA
Sbjct: 548  MSIKKRSKVVDRFNDP---ESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 604

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLH 1296
            + R WR GQ KP + YRL+A G++EEKI +RQ  K+ L++ ++D  +   +  +++++  
Sbjct: 605  MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKD 664

Query: 1297 LFEFGDD 1303
            LF F  D
Sbjct: 665  LFSFDPD 671


>gi|388854041|emb|CCF52385.1| probable RAD54-DNA-dependent ATPase of the Snf2p family [Ustilago
            hordei]
          Length = 865

 Score =  251 bits (640), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 189/633 (29%), Positives = 303/633 (47%), Gaps = 94/633 (14%)

Query: 685  LSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENII 740
            + AGA I     ++   I+ + + K +E  ++P  I  +L    + HQV G++F++    
Sbjct: 239  IEAGAEIPTPHKSL-AEILGLNKAKSKEVEKVPVVIDPRLGKVLRPHQVEGVKFLYRCTT 297

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTPVNVL 796
              I      +   GCI+A  MGLGKT Q I  ++T ++   +  ++ +    IV P +++
Sbjct: 298  GLIV-----ENAYGCIMADEMGLGKTLQCITLMWTLLKQSPIAGKSTIDKCIIVCPSSLV 352

Query: 797  HNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRN 850
             NW  E +KW  +   P  + +   +S+D   E   +W    G      V ++ Y   RN
Sbjct: 353  RNWANELIKWLGAA-APGNLALDGKLSKDEMIEATRRWCNASGRAITQPVMIVSYETLRN 411

Query: 851  LSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGS 910
            L            +E     + G  +L+CDE H +KN  + T QAL Q+K +RR+ L+G+
Sbjct: 412  L------------QEELGNTEVG--LLLCDEGHRLKNADSLTFQALTQIKVRRRVILSGT 457

Query: 911  PLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYE 970
            P+QN+L EY+ +++F     LGS  +FR  F+  I  G+ + +T +  +  N++   L  
Sbjct: 458  PIQNDLSEYFALLNFANPELLGSRIDFRKNFEIAILKGRDSEATEKQQQEANEKLAQLSA 517

Query: 971  QLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS 1030
             +  F+ R   +++ K LP K   V+  K++P Q  LY+ F          + + +I+K 
Sbjct: 518  LVSRFIIRRTNDLLSKYLPVKYEHVVFCKMAPFQLDLYRLF----------IRSPEIKKL 567

Query: 1031 FFA-GYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
                G Q L  I    GIL+   +        ++   S++                    
Sbjct: 568  LRGTGSQPLKAI----GILKKLCNHPDLLDLPSDLDGSEQYF------------------ 605

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLD 1148
                +G+  +D        H   EL  SGKM++L   L T+ +   DK ++ S    TLD
Sbjct: 606  ---PEGYTPRD------RRHVNPEL--SGKMMVLQRFLETIRATTNDKIVLISNYTQTLD 654

Query: 1149 LIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTR 1208
            + E           Q   W      +RLDG    ++RQKLV+RFN+P  K     L+S++
Sbjct: 655  VFERMC--------QANRW----GMFRLDGTMTINKRQKLVDRFNDPEGKEF-IFLLSSK 701

Query: 1209 AGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKR 1268
            AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI +R
Sbjct: 702  AGGCGLNLIGANRLVLFDPDWNPASDQQALARVWRDGQKKSCFVYRFIATGSIEEKILQR 761

Query: 1269 QVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 1300
            Q  K+ L++ VVD  Q   R  S E++  LF F
Sbjct: 762  QSHKQSLSSCVVDEAQDAARHFSGEDLRALFTF 794


>gi|410901417|ref|XP_003964192.1| PREDICTED: DNA excision repair protein ERCC-6-like [Takifugu
            rubripes]
          Length = 1421

 Score =  251 bits (640), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 184/609 (30%), Positives = 285/609 (46%), Gaps = 111/609 (18%)

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E+ +E  ++P  +  KL  +Q  G+R++WE   Q            G IL   MGLGKT 
Sbjct: 487  EEFDEGFKVPGFLWKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTI 536

Query: 768  QVIAFL----YTAMRSVN-----LGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFM 818
            QVI+FL    Y+ +R+        GL   +IV P  V+H W +EF  W P    P RV +
Sbjct: 537  QVISFLAGLSYSKLRTRGSNYRYAGLGPTIIVCPATVMHQWVKEFHTWWP----PFRVAV 592

Query: 819  LEDVSR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPD- 875
            L +       + +L+ +  +  G+ +  Y+A R                I      G D 
Sbjct: 593  LHETGSFTSNKKKLIPEIASCHGILITSYSAVR----------------IMQDTLQGWDW 636

Query: 876  -ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
              ++ DE H I+N  A  T A KQ +   R  L+GSP+QNNL E + + DFV  G LG+ 
Sbjct: 637  HYVILDEGHKIRNPNARVTTACKQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTL 696

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKT 992
              F  +F  PI  G ++N++   V+   + + +L + +  + ++RM  +V     LP K 
Sbjct: 697  PVFMEQFSVPITMGGYSNASPVQVQTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKN 756

Query: 993  VFVITVKLSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ 1049
              V+  KL+  QR++Y+ FLD   ++   N  +         F+G  AL +I NHP +  
Sbjct: 757  EQVLFCKLTEEQRQVYQSFLDSKEVYQILNGDM-------QVFSGLIALRKICNHPDLFS 809

Query: 1050 LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEH 1109
                 G P                              L+G  +D          L  E 
Sbjct: 810  -----GGPR----------------------------LLRGIPED---------QLTEEE 827

Query: 1110 TYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKK 1169
             +     SGK++++  +L +    G + L+F+QS   L+++E ++       ++ K    
Sbjct: 828  HFGFWKRSGKLIVVESLLRLWFRQGQRVLLFTQSRQMLNILEVFV-------RENKY--- 877

Query: 1170 GKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
               + ++DG T  S RQ L+  +NE  +K +   L++T+ G LG+NL  ANRVII D  W
Sbjct: 878  --SYVKMDGTTPISSRQPLIACYNE--DKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDW 933

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTI 1289
            NP+ D QA  RAWR GQ + V  YRL+  GT+EEKIY RQ+ K+ L  RV+   +  R  
Sbjct: 934  NPSTDTQARERAWRIGQKQQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFF 993

Query: 1290 SKEEMLHLF 1298
               ++  LF
Sbjct: 994  KSNDIYELF 1002


>gi|403166558|ref|XP_003889973.1| DNA repair and recombination protein RAD54 [Puccinia graminis f. sp.
            tritici CRL 75-36-700-3]
 gi|375166302|gb|EHS63112.1| DNA repair and recombination protein RAD54 [Puccinia graminis f. sp.
            tritici CRL 75-36-700-3]
          Length = 1049

 Score =  251 bits (640), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 186/611 (30%), Positives = 288/611 (47%), Gaps = 107/611 (17%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +S  L+ HQV G++F++     +   V+ G KG  CI+A  MGLGKT Q I  L+T ++ 
Sbjct: 459  LSKTLRPHQVEGVKFLYRC---ATGMVEQGAKG--CIMADEMGLGKTLQCITLLWTLLKQ 513

Query: 780  VNLG----LRTALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRAELLA-- 832
              +     +  A++  P +++ NW  EF KW  P  + PL V       +  +A LL   
Sbjct: 514  SPIAGKPSIEKAIVACPSSLVKNWANEFDKWLGPGAINPLAV-----DGKQTKANLLTSV 568

Query: 833  -KWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHM 884
             +W +  G      V ++ Y   R                +   L   P  +L+CDE H 
Sbjct: 569  RQWVSATGRRVPQPVMIVSYETLRG--------------TLVEELGRTPVGLLLCDEGHR 614

Query: 885  IKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNP 944
            +KN    T  AL  + C+RR+ LTG+P+QN+L EY+ +++F    +LG   +FR  ++ P
Sbjct: 615  LKNADNQTYAALNGINCERRVILTGTPIQNDLSEYFALLNFANPNYLGDRAQFRKSYELP 674

Query: 945  IENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQ 1004
            I  G+ ++S+  +V +   +   L  +++ F+ R   +++ K LP K   V+    S  Q
Sbjct: 675  ILRGRDSDSSESEVALAEAKLKELTTKVQKFIIRRTNDLLSKYLPVKYEHVVFCAPSAFQ 734

Query: 1005 RRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALA------QIWNHPGILQLTKDKGYPS 1058
              LY+ F+D           +K+ +    G Q L       ++ NHP +L L +D   P 
Sbjct: 735  LDLYRHFIDSPDL-------QKLLRG--VGCQPLKMLGILRKLCNHPDLLDLQQD--IPG 783

Query: 1059 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
             E                                 DG+  KD              + SG
Sbjct: 784  SEKY-----------------------------FPDGYRSKD-------PRAPARPELSG 807

Query: 1119 KMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            KM +L   L  + +   DK ++ S    TLD++E    K+ R  + G L        RLD
Sbjct: 808  KMTVLERFLHKIKTETTDKIVLISNFTQTLDVME----KMCRERRWGNL--------RLD 855

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G  + ++RQKLV+RFN+P  K     L+S++AG  GINL  ANR+I+ D  WNP  D QA
Sbjct: 856  GTMQITKRQKLVDRFNDPEGKEF-IFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQA 914

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH-RTISKEEMLH 1296
            + R WR GQ K  F YR +  G++EEK+++RQ  K  L+A VVD Q+   R  S+E +  
Sbjct: 915  LARVWRDGQKKNCFVYRFILTGSVEEKVFQRQSQKMKLSASVVDEQEDEARMFSRESLKE 974

Query: 1297 LFEFGDDENPD 1307
            LF   ++   D
Sbjct: 975  LFRLNENTQSD 985


>gi|308499699|ref|XP_003112035.1| CRE-RAD-54 protein [Caenorhabditis remanei]
 gi|308268516|gb|EFP12469.1| CRE-RAD-54 protein [Caenorhabditis remanei]
          Length = 1096

 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 172/570 (30%), Positives = 278/570 (48%), Gaps = 87/570 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++FMW+ +        +  +  GCI+A  MGLGKT Q I+ L+T +R     
Sbjct: 477  LRPHQRDGVKFMWDCVTGV-----NIPEYHGCIMADEMGLGKTLQCISLLWTLLRQSPDA 531

Query: 784  LRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLA-------- 832
              T   ++IV P +++ NW +E  KW  + L  +       V   +R  ++A        
Sbjct: 532  CPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAM------PVDSGKRELIIASLNSFMAD 585

Query: 833  -KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRAD 891
             K R    V +I Y  FR            +   I H+   G  I++CDE H +KN+   
Sbjct: 586  SKMRCAIPVLIISYETFR------------LYANILHSGDVG--IVICDEGHRLKNSDNL 631

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
            T QAL  +KC RR+ ++G+P+QN+L+EY+ +V+FV  G LG++ EFR +F+N I  G+  
Sbjct: 632  TYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDA 691

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
            ++++ED K   +++  +   ++  + R    ++ K LP K   +I  K S LQ  LY + 
Sbjct: 692  DASAEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKL 751

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
            ++          ++    S  +    L ++ NHP ++              E+    +N 
Sbjct: 752  IECEKQNRIVEKDKGATASALSFITHLKKLCNHPYLVY-------------EEFQKPDNR 798

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC- 1130
              N       + +  F +  N   F                +  +SGKM +L  IL +  
Sbjct: 799  FRN-------KCLPVFPEAFNPKSF----------------DPSFSGKMKVLDYILAVTR 835

Query: 1131 SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVE 1190
                DK ++ S    T+D     L KL           +G D+ RLDG     +R K+V+
Sbjct: 836  KTTDDKFVLVSNYTQTIDQF-MALCKL-----------RGYDFVRLDGSMSIKQRSKIVD 883

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
             FN+P +  + C L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  
Sbjct: 884  TFNDP-SSTIFCFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKTC 942

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            F YRL+A G++EEK+++RQ  K+ L++ VV
Sbjct: 943  FIYRLLATGSIEEKMFQRQTHKKALSSCVV 972


>gi|196008607|ref|XP_002114169.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens]
 gi|190583188|gb|EDV23259.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens]
          Length = 687

 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 181/599 (30%), Positives = 297/599 (49%), Gaps = 69/599 (11%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   IS +L+ HQ  G+ F++E ++  +R       G G ILA  MGLGK+ Q IA +
Sbjct: 129  VVVDPYISRRLRPHQRDGVIFLYECVM-GMRDFS----GFGAILADEMGLGKSLQCIALI 183

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T  +    G    ++  L+VTP +++ NW +EF KW   E      F +  VS D+R E
Sbjct: 184  WTLYKQGMYGGKAPIKRILLVTPGSLVQNWSREFRKWLGIER-----FKVFPVSSDKRVE 238

Query: 830  LLAKWRAKGGVFLIGYTAF-RNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K+  +  + +I Y  F R+    K +K                D+L+CDE H +KN+
Sbjct: 239  EFIKY-PQYPLMIISYEMFVRSCDTLKGIKF---------------DLLICDEGHRLKNS 282

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               T   +  V+ +RR+ +TG+P+QN+L E+Y +V+F   G LGS   FR  +++PI   
Sbjct: 283  SNKTFALISSVQTRRRVLVTGTPIQNDLQEFYAIVEFCNPGILGSEAAFRRIYEDPIAKS 342

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +      ++  +   R+  L    K F  R    V+   LPPK  +VI  + +PLQ  +Y
Sbjct: 343  RLPGCNKKEKNLGESRAIELSRLTKLFCLRRTQEVIIHHLPPKVEYVIFCRTAPLQVLIY 402

Query: 1009 KRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSD 1068
            +  L    F     + E      F    AL ++ N P ++       Y + +DAE    D
Sbjct: 403  RHLLSSRLFKECISAVESNYCRHFMCINALRKVCNEPNLI-------YEAVKDAESHLID 455

Query: 1069 ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT 1128
            +       IG+     +  L        +  ++  D          ++SGK+ +L ++L 
Sbjct: 456  DE------IGKSIEEEHTLLYA-GIQSLYPPNYSPDTF------TTEHSGKLAVLSNLLD 502

Query: 1129 MC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK-KGKDWYRLDGRTESSER 1185
                ++  +K +V S    TLD+++             K+ K K   + RLDG T +S+R
Sbjct: 503  WIYQNSPKEKVVVVSNFTRTLDVLQ-------------KMCKSKNYRYVRLDGSTPTSKR 549

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
              +VE FN   +K     L+S++AG  G+NL  A+R+++ D  WNP  DLQA+ R WR G
Sbjct: 550  HTIVENFNSSYSKTF-VFLLSSKAGGTGLNLIGASRLVLYDIDWNPANDLQAMARIWRDG 608

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT-ISKEEMLHLFEFGDD 1303
            Q + V+ YRL+  GT+EEKI++RQV K  L+  V+D ++  R+  +++++ +LF   +D
Sbjct: 609  QKRDVYIYRLVTTGTIEEKIFQRQVMKHDLSGAVMDTRESGRSQFTRKDLHNLFSLRED 667


>gi|397479836|ref|XP_003811210.1| PREDICTED: uncharacterized protein LOC100971761 [Pan paniscus]
          Length = 1550

 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 187/634 (29%), Positives = 284/634 (44%), Gaps = 120/634 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G RF++ + I           G GCIL   MGLGKT QVI+FL  
Sbjct: 115  IPYTINRYLRDYQREGTRFLYGHYIH----------GGGCILGDDMGLGKTVQVISFLAA 164

Query: 776  AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                  RS+      +   +  LIV P++VL+NWK E   W     
Sbjct: 165  VLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW----- 219

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  + L  Y   R            +  +  ++L+
Sbjct: 220  GYFRVTVLHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 265

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 266  WS--AVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 323

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS   F+ +F +P+E+GQ   +T  ++    +    L +++ G+  R    ++K  LP K
Sbjct: 324  GSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKK 383

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 384  EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKT 443

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
             + +    L ++ NH  +LQ            A  +S  +      +  +      DF+Q
Sbjct: 444  LYLSYLTVLQKVANHVALLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 491

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD+
Sbjct: 492  KSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 539

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            ++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST A
Sbjct: 540  LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTMA 585

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQ
Sbjct: 586  GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 645

Query: 1270 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            + K+ L   VV  +   R       SKE    LF
Sbjct: 646  IYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 679


>gi|449266391|gb|EMC77444.1| DNA repair and recombination protein RAD54-like protein, partial
            [Columba livia]
          Length = 742

 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 184/615 (29%), Positives = 292/615 (47%), Gaps = 82/615 (13%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            + + ++K    V +   +S  L+ HQ  G++F+W+ +    R++       GCI+A  MG
Sbjct: 130  LKIDKDKAPVHVVVDPVLSRVLRPHQREGVKFLWDCVTS--RRIPGSH---GCIMADEMG 184

Query: 763  LGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML 819
            LGKT Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   
Sbjct: 185  LGKTLQCITLMWTLLRQSPDCKPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGG 244

Query: 820  EDVSRDRRAELLAK---WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-D 875
                 DR+          R    + +I Y  FR      H +          ALQ G   
Sbjct: 245  SKEEIDRKLVGFMNQRGLRVPSPILIISYETFR-----LHAE----------ALQKGSVG 289

Query: 876  ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
            +++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++ 
Sbjct: 290  LVICDEGHRLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQ 349

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFV 995
            EF+  F+ PI  G+  +++  +     +R   L   +   + R   +++ K LP K   V
Sbjct: 350  EFKRHFEIPILKGRDADASEAERHKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQV 409

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +  +L+PLQ  LYK FL       + +   KI  S  +   +L ++ NHP ++       
Sbjct: 410  VCCRLTPLQAELYKNFLK-QAKPVEELKEGKISVSSLSSITSLKKLCNHPALIH------ 462

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
                    D   +E   +   +   P             G+  K             E  
Sbjct: 463  --------DKCVEEEEGFMGALDLFP------------AGYSTKS-----------VEPQ 491

Query: 1116 YSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
             SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  +  Y
Sbjct: 492  LSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFE-------------KLCRNRRYLY 538

Query: 1175 -RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
             RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D  WNP  
Sbjct: 539  VRLDGTMSIKKRAKIVERFNSPSSPEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 597

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKE 1292
            D QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  
Sbjct: 598  DEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLG 657

Query: 1293 EMLHLFEFGDDENPD 1307
            E+  LF   +    D
Sbjct: 658  ELKELFTLNETTTSD 672


>gi|170580649|ref|XP_001895355.1| recombination factor GdRad54 [Brugia malayi]
 gi|158597754|gb|EDP35808.1| recombination factor GdRad54, putative [Brugia malayi]
          Length = 865

 Score =  250 bits (639), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 188/612 (30%), Positives = 295/612 (48%), Gaps = 96/612 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +  ++SA L+ HQ  G++FM++  +  +R + S     GCI+A  MGLGKT Q I  +
Sbjct: 242  VVVDPTLSAVLRPHQREGVKFMYD-CVTGVR-IPSAH---GCIMADEMGLGKTLQCITLM 296

Query: 774  YTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
            +T +R        L   +IV P +++ NW +E  KW    +  L V   +   +D     
Sbjct: 297  WTLLRQGPDAKPTLNKTVIVCPSSLVKNWDKEIRKWLGGRVNALPV---DSGGKDEIDRN 353

Query: 831  LAKWRAKGGV------FLIGYTAFRNLSFGKHVKDRNMAREICHA---LQDGPDILVCDE 881
            L K+ ++ GV       +I Y  FR                  HA   LQ    +++CDE
Sbjct: 354  LEKFMSQMGVRCPTPVLIISYETFR-----------------LHASILLQKEIGLIICDE 396

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
             H +KN+   T QAL  +KC+RR+ ++G+P+QN+L+EYY +++FV  G LG++ EF+ RF
Sbjct: 397  GHRLKNSDNQTYQALFGLKCERRVLISGTPIQNDLLEYYSLINFVNPGLLGTASEFKRRF 456

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
            +N I  G+  ++T    +  +     +   +   + R    ++ K LP K   +I  KL+
Sbjct: 457  ENIILRGRDADATDAQREKGDTALTEMSSIVSKCIIRRTSALLTKYLPVKYELIICCKLT 516

Query: 1002 PLQRRLYKRFLDLH--GFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR 1059
             LQ +LY++ +     G        +KI  +  +    L ++ NHP   QL  +K     
Sbjct: 517  ELQEKLYRQLISAFSKGGKQKVTEGDKITGTALSFITNLKKLCNHP---QLILNKCQKKE 573

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
            E  ED          +  GE                 F K +           E  +SGK
Sbjct: 574  EGFEDC-------LKLFPGE-----------------FGKKF-----------EPAFSGK 598

Query: 1120 MVLLLDILTMC-SNMGDKSLVFSQSIPTLD-LIEF-YLSKLPRPGKQGKLWKKGKDWYRL 1176
            M +L  +L    +   DK ++ S    T+D  +E   L + P              + RL
Sbjct: 599  MKVLDYLLAATRATTNDKFVLVSNYTQTIDAFVELCQLRRYP--------------YIRL 644

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG     +R KLVE+FN+P +      L+S++AG  G+NL  ANR+I+ D  WNP  D Q
Sbjct: 645  DGTCTIKQRAKLVEKFNDPESVEY-VFLLSSKAGGCGLNLIGANRLIMFDPDWNPANDDQ 703

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEML 1295
            A+ R WR GQ K  F YRL++ G++EEK+++RQ  K+ L++ VVD    V R  SK+++ 
Sbjct: 704  AMARVWRDGQKKNCFIYRLLSTGSIEEKMFQRQAHKKALSSCVVDEISDVARHFSKDQLR 763

Query: 1296 HLFEFGDDENPD 1307
            HLF+   D   D
Sbjct: 764  HLFDLKADVASD 775


>gi|219123447|ref|XP_002182036.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406637|gb|EEC46576.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 545

 Score =  250 bits (639), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 178/599 (29%), Positives = 294/599 (49%), Gaps = 83/599 (13%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +P  ++  L+ HQ  G++F++E ++     +K  + G GCILA  MGLGKT Q +  +
Sbjct: 1    VYVPPVLAKWLRPHQREGVQFIYECVM----GLKDFN-GHGCILADDMGLGKTLQSVTLI 55

Query: 774  YTAMRS--VNLGLRTA---LIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRR 827
            +T +++     G  TA   ++V P +++ NW+ EF+KW  P  +K L +   +  + +R 
Sbjct: 56   HTLLKTGITANGAPTAKRVIVVCPCSLVKNWENEFVKWLGPGVVKTLAIAEADRKTVERN 115

Query: 828  AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
             +   + +    V +  Y   R      HV   +   + C       D+LVCDEAH +KN
Sbjct: 116  LDTFVRTKI-FNVMIASYECIRT-----HVGRLSKHADCC-------DLLVCDEAHRLKN 162

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
            +   T++AL  +  +RR+ LTG+P+QN+L E+Y MVDF   G LG+  EFR +   PI  
Sbjct: 163  SDNQTSRALNSLPVRRRVLLTGTPMQNDLQEFYAMVDFTNPGILGTPEEFRRKTLFPILR 222

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            G+  +++      M Q  + +   +  F+ R    +  + LPPK V V+   L+ +Q+ +
Sbjct: 223  GREPDASDAQKHKMMQIQNDMSRIVNDFILRRVNTLNAQHLPPKLVQVVCCNLTEIQQNM 282

Query: 1008 YKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAED 1064
            Y+  +   D+    + +  N        +  Q L ++ NHP +  +           A  
Sbjct: 283  YQHLVNSKDMQHVLDGKQVN------CLSSIQMLMKLANHPSLASM-----------AAP 325

Query: 1065 SSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLL 1124
             +         V GE      DF   +                       ++SGKM +L 
Sbjct: 326  GADGIAKFLPYVPGEGGGRRGDFAPVRP----------------------EWSGKMFVLY 363

Query: 1125 DILTMCSNMG---DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1181
             ++      G   DK ++ S    TLDLI     ++ R    G        + RLDG   
Sbjct: 364  RLMKEMRKPGNGNDKIVIVSNYTQTLDLI----GRMCRENSWG--------FCRLDGSIT 411

Query: 1182 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1241
              +RQK+ + FN+P N  +   L+S++AG  G+NL   NR+++ D  WNP  D QA  R 
Sbjct: 412  MKKRQKMCDEFNDP-NSPLVAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARC 470

Query: 1242 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            WR GQ K  F YR +A GT+EEKI++RQ++KEGL + V D++Q ++ +S +++ +LF+ 
Sbjct: 471  WRDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVVDDKEQTNQ-LSTKDLKNLFKL 528


>gi|393217524|gb|EJD03013.1| hypothetical protein FOMMEDRAFT_123160 [Fomitiporia mediterranea
            MF3/22]
          Length = 1026

 Score =  250 bits (639), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 178/597 (29%), Positives = 298/597 (49%), Gaps = 89/597 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR- 778
            ++  L+ HQ  G++FM+E ++  +RK     +G GCILA  MG+GKT Q I  ++T ++ 
Sbjct: 356  LARHLRPHQKEGVKFMYECVM-GLRK----HEGQGCILADEMGMGKTLQTITLVWTLLKQ 410

Query: 779  ---SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW- 834
               +    +   +IV PV ++ NWK+EF KW   +   L +F     + D+  E + ++ 
Sbjct: 411  NCYAGTPAVGKVMIVCPVTLIANWKKEFHKWLGKDR--LGIF-----TGDKNKEAVKQFI 463

Query: 835  -RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI--LVCDEAHMIKNTRAD 891
                  V +IGY            K R +  E+ + L   P I  ++CDE H +K++   
Sbjct: 464  NSKIHQVLIIGYE-----------KLRTVISELAYCL---PPIGLIICDEGHRLKSSNNK 509

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
            T+   + +   RRI L+G+P+QN+L E++ M DF   G L     FR  F+N I   +  
Sbjct: 510  TSTMFEALSTPRRIILSGTPIQNDLSEFHAMADFCNPGLLDDYSIFRKVFENAILKSRTP 569

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
            + ++++ +I   R   L    + FV R + +++   LPPK  +V+ V  SPLQR+++ + 
Sbjct: 570  DCSAKEREIGEGRQAQLQTVARSFVLRREASILTNYLPPKYEYVVFVTPSPLQRQMFVKI 629

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
            L         V +  + +S  A  Q L ++ N P +L+   +K    RED  +S + E  
Sbjct: 630  LQPDTLAT--VLHGSMARS-LAMIQLLTKLSNSPILLKAALEK----REDKAESDAHEAF 682

Query: 1072 DYNV-VIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 1130
            D  V ++ E  R  +  L                            SGK+  L ++L   
Sbjct: 683  DEAVKLLPECARAQDPAL----------------------------SGKLQALSNLLAYL 714

Query: 1131 SNMGD-KSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
                D K ++ S    TLD+IE +              +K   + RLDG+T  ++RQ+ V
Sbjct: 715  RKETDEKCILVSHYTSTLDVIEEFCK------------EKKYTFLRLDGQTPVAKRQEYV 762

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            +RFN+         L+S +AG +G+NL  A+R+ ++D  WNP++DLQ++ R  R GQ +P
Sbjct: 763  DRFNKAPQSGAFLFLLSAKAGGVGLNLIGASRLCLIDSDWNPSHDLQSMARIHRDGQKRP 822

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR------TISKEEMLHLFEF 1300
            VF YRL+  GT++EKIY+RQ+TK  L+A ++ +           + +++E+  LF F
Sbjct: 823  VFIYRLLTAGTIDEKIYQRQITKLALSASLMGKDAPDSGSSKSDSFTQKELRDLFTF 879


>gi|260802348|ref|XP_002596054.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae]
 gi|229281308|gb|EEN52066.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae]
          Length = 791

 Score =  250 bits (638), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 184/604 (30%), Positives = 289/604 (47%), Gaps = 85/604 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   +S  L+ HQ  GI F++  ++  +R       GLG ILA +MGLGKT Q I  +
Sbjct: 169  VVVDPHLSRHLRPHQRDGIIFLYLCVM-GMRD----HPGLGAILADSMGLGKTLQCITMI 223

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T ++    G    L   LIVTP +++ NW +EF KW  +E    +V+    V +D R +
Sbjct: 224  WTLLKQGPYGGKPVLHRILIVTPGSLVKNWVKEFKKWLGNER--CKVYA---VGQDSRVD 278

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
              A+      V +I Y     + + + ++  N             D++VCDE H +KNT 
Sbjct: 279  EFAR-SPLYPVMIISYEML--VRYVRDIEKINF------------DLIVCDEGHRLKNTN 323

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              TT ++  +  +RRI LTG+P+QN+L E + +VDF   G LG    FR  ++ PI    
Sbjct: 324  IKTTSSISGLSARRRIVLTGTPIQNDLQELHSIVDFCNPGVLGPITAFRKVYEEPIVRSH 383

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
               +T  +  +   R+  L      F  R   +V  K LPPK   V+  + +PLQ  +Y+
Sbjct: 384  QPGATEAEKTLGATRAEELSRLTGQFTLRRTEDVNNKYLPPKVEAVVFCRPTPLQLDIYR 443

Query: 1010 RFLDLHGFTNDRVSNEKIRKSF-FAGYQALAQIWNHPGILQLTKDKGYPSREDAEDS--- 1065
            + L      +   SN     S       AL ++ N P ++       Y + ++ ED    
Sbjct: 444  KLLCSRVLKSFLYSNRPTDGSLHLMCISALKKLCNDPCLI-------YTAAKEGEDELFG 496

Query: 1066 -SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLL 1124
                E   Y  V+   PR                        ++      +YSGK+ +L 
Sbjct: 497  FDQGEESIYKDVLSLFPRG-----------------------YDPNSSSPEYSGKLQVLA 533

Query: 1125 DILTMCSNMG--DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTES 1182
            D+L    + G  ++ +V S    TLD+++     L                 RLDG T +
Sbjct: 534  DLLGSLYSEGPRERIVVVSNYTQTLDMVQVRYGYL-----------------RLDGSTPT 576

Query: 1183 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1242
             +RQ++VERFN+   +     L+ST+AG +G+NL  A+R+++ D  WNP  DLQA+ R W
Sbjct: 577  GKRQQIVERFNDKYCRDF-VFLLSTKAGGVGLNLIGASRLVLYDIDWNPANDLQAMARVW 635

Query: 1243 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT-ISKEEMLHLFEFG 1301
            R GQ + V  YRL+  GT+EEKIY+RQ++K+GL+  VVD +   +   S E++  LF   
Sbjct: 636  RDGQPRVVHIYRLITTGTIEEKIYQRQISKQGLSGAVVDAKSSSKVQFSAEDLKDLFTLH 695

Query: 1302 DDEN 1305
            +D +
Sbjct: 696  EDTD 699


>gi|307174075|gb|EFN64762.1| DNA repair and recombination protein RAD54-like [Camponotus
            floridanus]
          Length = 682

 Score =  250 bits (638), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 179/594 (30%), Positives = 287/594 (48%), Gaps = 91/594 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---V 780
            L+ HQ  G++FM+E +       K  +   GCI+A  MGLGKT Q I  L+T ++     
Sbjct: 89   LRPHQREGVKFMYECVTG-----KRIENAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 143

Query: 781  NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG- 839
               +  A+IV P +++ NW  E  KW  + +  L +   +    D   +LL   +  GG 
Sbjct: 144  KPLIDKAIIVAPSSLVKNWYNEINKWLNNIVNTLAIDGGKKAEID--TKLLRFMKTYGGR 201

Query: 840  ----VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQA 895
                + +I Y  FR            +   + H  QD   +++CDE H +KN+   T Q+
Sbjct: 202  CVTPILIISYETFR------------LHAHVLH--QDEVGLVLCDEGHRLKNSENQTYQS 247

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            L  +K +RR+ L+G+P+QN+L+EY+ +V FV +G LG++ EFR +++ PI  GQ   +T 
Sbjct: 248  LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKYETPILRGQDAAATD 307

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
            +  K+  +R   L   +   + R    ++ K LP K  FV+ +K+  LQ RLYK F+   
Sbjct: 308  DQRKLAQERLSDLVSVVNKCLIRRTSALLSKYLPLKHEFVVCIKMGELQTRLYKNFIQSE 367

Query: 1016 GFTNDRVSNEKIRK----SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
                    ++  +K    S  A    L ++ NHP    L  DK     E  E ++     
Sbjct: 368  SIKRSMEEDDNPKKGGHLSALAAITLLKKLCNHP---DLIYDKIMEKSEGFEKAAQ---- 420

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEH-TYKEL--DYSGKMVLLLDIL- 1127
                                             LL  H + K+L  + SGK+++L  +L 
Sbjct: 421  ---------------------------------LLPSHYSTKQLLPELSGKLMVLDCLLA 447

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
            ++ +   DK ++ S    TLDL E   +            K+  ++ RLDG     +R K
Sbjct: 448  SIKTTTNDKIVLVSNYTQTLDLFEKLCN------------KRSYNYVRLDGSMTIKKRSK 495

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            +VE FN   +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ 
Sbjct: 496  VVENFNSDTSSDF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 554

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLFEF 1300
            K  F YR ++ GT+EEKI++RQ  K+ L++ VVD++  V R  +  ++  LF+ 
Sbjct: 555  KTCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVDQEDDVARHFTINDLRDLFKL 608


>gi|300795783|ref|NP_001178684.1| fibrinogen silencer-binding protein [Rattus norvegicus]
          Length = 888

 Score =  250 bits (638), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 188/609 (30%), Positives = 301/609 (49%), Gaps = 91/609 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  G+ F++E ++  +R V       G ILA  MGLGKT Q I+ +
Sbjct: 266  VVIDPHLVRHLRPHQKDGVAFLYECVM-GMRAVGK----CGAILADEMGLGKTLQCISLI 320

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 321  WTLQCQGPYGGKPIVKRTLIVTPGSLVNNWRKEFQKWLGSER--IKIFT---VDQDHKVE 375

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
                  A   V +I Y           ++  +  + I   L      L+CDE H +KN+ 
Sbjct: 376  EFIN-SAFHSVLIISYEML--------LRSLDRIKTITFGL------LICDEGHRLKNSG 420

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              TT AL  + C++R+ LTG+P+QN+L E++ +VDFV  G LGS   +R  ++ PI   +
Sbjct: 421  IKTTAALSSLSCEKRVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRRIYEEPIVMSR 480

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
              +++ E+ ++  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY+
Sbjct: 481  EPSASKEERELGERRTTELTRLTGCFILRRTQEVINKYLPPKIENVVFCRPGALQIELYR 540

Query: 1010 RFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDKGYPSRED 1061
            + L        L G   +         +      AL ++ NHP +L    K K +     
Sbjct: 541  KLLSSQSVRFCLQGLLGN--------SAHLICIGALKKLCNHPRLLFSFVKGKEF----- 587

Query: 1062 AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 1121
              +SS DEN + ++  G     +  F  G N             L + +  E   SGK+ 
Sbjct: 588  --NSSRDENEERSLCQGL----LTVFPAGYN-------------LLQLSESE---SGKLQ 625

Query: 1122 LLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK-KGKDWYRLDG 1178
            +L+ +L   S +   +K ++ S    TL+L+E             ++ K  G    RLDG
Sbjct: 626  VLVKLLAAISELRPTEKVILVSNYRQTLNLLE-------------EVCKCHGYACARLDG 672

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
            +T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+
Sbjct: 673  QTPVSQRQQIVDNFNSKYSTDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAM 731

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLH 1296
             R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL+  VVD  R       S EE+ +
Sbjct: 732  ARVWRDGQKHPVHVYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEQIQFSVEELKN 791

Query: 1297 LFEFGDDEN 1305
            LF   ++ +
Sbjct: 792  LFTLHENSH 800


>gi|66811190|ref|XP_639303.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
 gi|60467929|gb|EAL65942.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
          Length = 931

 Score =  250 bits (638), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 169/567 (29%), Positives = 268/567 (47%), Gaps = 81/567 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +S KL+ HQ  G++FM++ ++      + G KG GCILA  MGLGK+ Q I  L+T ++ 
Sbjct: 279  LSQKLRPHQREGVQFMFDCLLG----FRGGFKGNGCILADDMGLGKSIQAITILWTLLKQ 334

Query: 780  VNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRA 836
               G  TA   +IV P  ++ NW QE  KW    +  + +    + ++  RA+L      
Sbjct: 335  GPKGESTAKKAVIVAPCTLVGNWGQELKKWLGDGVNTVAI---GESTKTGRAKLTELEFG 391

Query: 837  KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQAL 896
            K  V +I Y   R               +IC     G  +++CDE H +KN    TT+A+
Sbjct: 392  KADVLIISYDQLRI-----------YCEDICKITSIG--LVICDEGHRLKNAEIKTTKAV 438

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
              +   RR+ L+G+P+QN+L E+Y MV+FV  G L +   F+N +  PI   ++ +++ E
Sbjct: 439  SMIPTARRVILSGTPIQNDLTEFYAMVNFVNPGVLKNVATFKNVYDAPIVASRNPDASDE 498

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            + +I  QRS  L      F+ R    V  + LPPK  +VI  KL+PLQ  +YK  +    
Sbjct: 499  EKEIGRQRSLELSRLTSQFILRRTAFVNTQYLPPKVEYVIFCKLTPLQLSIYKHLI---- 554

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVV 1076
                    E    +F +   AL      P I  L K           D  +D        
Sbjct: 555  -------KEAKDSAFASTTGAL------PLITTLKKLSNCAELVYTPDKETD-------- 593

Query: 1077 IGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN--MG 1134
                         G +    F K+W   +          YS K++ +  +L    N   G
Sbjct: 594  ------------VGTSILKLFPKEWNPKVFQPQ------YSSKLLFVDRLLANIRNSKSG 635

Query: 1135 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 1194
            DK+++ S    TL+++                  +G  +++LDG T +++RQ+LV  +N+
Sbjct: 636  DKTVIISNYTQTLEVLATMCK------------TRGYAYFQLDGSTANAKRQQLVNLYND 683

Query: 1195 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYR 1254
            P        L+S++AG +G+NL   N +++ D  WNP  D Q++ R WR GQ K V  YR
Sbjct: 684  PARPEF-VFLLSSKAGGVGLNLIGGNHLVLFDADWNPANDAQSMARVWREGQKKIVSIYR 742

Query: 1255 LMAHGTMEEKIYKRQVTKEGLAARVVD 1281
                GT+EEKI++RQ+TK+ L+  + +
Sbjct: 743  TFTTGTIEEKIFQRQLTKQALSTSITE 769


>gi|295664715|ref|XP_002792909.1| SNF2 family N-terminal domain containing protein [Paracoccidioides
            sp. 'lutzii' Pb01]
 gi|226278430|gb|EEH33996.1| SNF2 family N-terminal domain containing protein [Paracoccidioides
            sp. 'lutzii' Pb01]
          Length = 682

 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 189/618 (30%), Positives = 293/618 (47%), Gaps = 101/618 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   RIP  I  +L    + HQV G++F++      I       K  GCI+A  M
Sbjct: 67   IKKKVETRPRIPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDP-----KANGCIMADEM 121

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTPVNVLHNWKQEFMKWRPSELKPLRVF 817
            GLGKT Q I  L+T ++      +T +    I  P  ++ NW  E +KW   +   +  F
Sbjct: 122  GLGKTLQCITLLWTLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGKD--AVTPF 179

Query: 818  MLEDVSRDRRAEL---LAKWRAKGG------VFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            +++   +  +AEL   L +W    G      V ++ Y   R N+     +KD  +     
Sbjct: 180  VID--GKATKAELTSQLRQWAISSGRAVVRPVLIVSYETLRLNVD---EIKDTQIG---- 230

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
                    +L+CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ +++F  
Sbjct: 231  --------LLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFAN 282

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LG+  EF  +F+ PI  G+  + T ED K  ++    L   +  F+ R   +++ K 
Sbjct: 283  PNILGTRSEFHKKFEMPILRGRDADGTDEDRKKGDETVAELLAIVNKFIIRRTNDILSKY 342

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   L+P Q  LY  F+   D+      + S              L ++ NH
Sbjct: 343  LPVKYEHVVFCGLAPFQTDLYNYFIQSPDIKSLLRGKGSQP------LKAIGILKKLCNH 396

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L L  D     +   ED    E+                  +G++ D    + W   
Sbjct: 397  PDLLNLGADLPGCEQFFPEDYIPIES------------------RGRDRD---VRSW--- 432

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM++L  +L  +  +  DK ++ S    TLDL E    +L R  + 
Sbjct: 433  -----------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----RLCRSRQY 477

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    ++RQKLV++FN+P  +     L+S++AG  GINL  ANR++
Sbjct: 478  GCL--------RLDGSMNVTKRQKLVDKFNDPEGEEF-VFLLSSKAGGCGINLIGANRLV 528

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  
Sbjct: 529  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSA 588

Query: 1283 QQVHRTISKEEMLHLFEF 1300
            + V R  S + +  LF+F
Sbjct: 589  EDVERHFSLDSLRELFQF 606


>gi|114620949|ref|XP_001142757.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 1 [Pan
            troglodytes]
 gi|410225608|gb|JAA10023.1| RAD54 homolog B [Pan troglodytes]
 gi|410256892|gb|JAA16413.1| RAD54 homolog B [Pan troglodytes]
 gi|410338389|gb|JAA38141.1| RAD54 homolog B [Pan troglodytes]
          Length = 910

 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 186/605 (30%), Positives = 299/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGSCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   V+  +   LQ  LY
Sbjct: 500  REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  ++   P + N  L       F +K+                S
Sbjct: 605  KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 641

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + R
Sbjct: 642  GKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 689

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 690  LDGQTPISQRQQIVDGFNSQ-HSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 748

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE
Sbjct: 749  QAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEE 808

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 809  LKNLF 813


>gi|88319960|ref|NP_001034645.1| DNA repair and recombination protein RAD54B isoform 1 [Mus musculus]
 gi|51316246|sp|Q6PFE3.1|RA54B_MOUSE RecName: Full=DNA repair and recombination protein RAD54B; AltName:
            Full=RAD54 homolog B
 gi|34785459|gb|AAH57604.1| RIKEN cDNA E130016E03 gene [Mus musculus]
          Length = 886

 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 184/591 (31%), Positives = 293/591 (49%), Gaps = 89/591 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  GI F++E ++  +R V       G ILA  MGLGKT Q I+ ++T       G
Sbjct: 274  LRPHQKDGIIFLYECVM-GMRAVGK----CGAILADEMGLGKTLQCISLIWTLQCQGPYG 328

Query: 784  ----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG 839
                ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E          
Sbjct: 329  GKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIFT---VDQDHKVEEFIN-STFHS 382

Query: 840  VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQV 899
            V +I Y           ++  +  + I   L      L+CDE H +KN+   TT AL  +
Sbjct: 383  VLIISYEML--------LRSLDQIKTIPFGL------LICDEGHRLKNSSIKTTTALSSL 428

Query: 900  KCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVK 959
             C++ + LTG+P+QN+L E++ +VDFV  G LGS   +R  ++ PI   +  +S+ E+ +
Sbjct: 429  SCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISREPSSSKEERE 488

Query: 960  IMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD------ 1013
            +  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY++ L       
Sbjct: 489  LGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLRSQSVRF 548

Query: 1014 -LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS-DENM 1071
             L G   +         +      AL ++ NHP +L       + S +  E SSS +EN 
Sbjct: 549  CLQGLLEN--------SAHLICIGALKKLCNHPCLL-------FSSVKGKEFSSSCEENE 593

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 1131
            + N+  G     ++ F  G N   F +++                SGK+ +L+ +L +  
Sbjct: 594  ERNLCQGL----LSVFPAGYNPLQFSEEE----------------SGKLQVLVKLLAVIH 633

Query: 1132 NM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
             +   +K ++ S    TL+++E                + G    RLDG+T  S+RQ +V
Sbjct: 634  ELRPTEKVILVSNYRQTLNVLEEVCK------------RHGYACARLDGQTPVSQRQHIV 681

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            + FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+ R WR GQ  P
Sbjct: 682  DSFNSKYSTDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHP 740

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLF 1298
            V  YRL+  GT+EEKIY+RQ++K+GL+  VVD  R   H   S EE+ +LF
Sbjct: 741  VHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEHIQFSVEELKNLF 791


>gi|432106413|gb|ELK32206.1| DNA repair and recombination protein RAD54B [Myotis davidii]
          Length = 817

 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 189/600 (31%), Positives = 302/600 (50%), Gaps = 87/600 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   ++  L+ HQ  G+ F++E ++  +R     +   G ILA  MGLGKT Q I+ L
Sbjct: 192  VVIDPHLAYYLRPHQKEGLIFLYECVM-GMRV----NGRCGAILADEMGLGKTLQCISLL 246

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 247  WTLQCQGPYGGKPIIKKTLIVTPGSLVNNWRREFQKWLGSER--IKIFT---VDQDHKVE 301

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 302  EFIK-SPLYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 345

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   FR  ++ PI   
Sbjct: 346  AIKTTTALISLACEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSFRKIYEEPIIVS 405

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ ED ++  +R+  L      F  R    V+ K LPPK   V+  +   LQ  LY
Sbjct: 406  RQPSASKEDKELGERRAAELVCFTGLFFLRRTQEVINKYLPPKIENVVFCRPGALQLELY 465

Query: 1009 KRFLDLHGFTNDRVSNEKIRKSF-----FAGYQALAQIWNHPGILQLTKDKGYPSREDAE 1063
            ++ L      N +     ++ S           AL ++ NHP +L       + S ++ E
Sbjct: 466  QKLL------NSQAVRFCLQGSLENSPHLICIGALKKLCNHPCLL-------FNSIKEKE 512

Query: 1064 DSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 1122
             SS+ DE+ + ++  G     +N F    N   F +K+                SGK+ +
Sbjct: 513  CSSTWDEHEESSLYEGL----LNVFPADYNPLMFTEKE----------------SGKLQV 552

Query: 1123 LLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT 1180
            L  +L +   +   D+ ++ S    TL+++            Q    + G    RLDG+T
Sbjct: 553  LTKLLAVIHELRPTDRVVLVSNYTQTLNIL------------QEVCKRHGYACTRLDGQT 600

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
              S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+ R
Sbjct: 601  PVSQRQQIVDGFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSR 659

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLF 1298
             WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL+  VVD  +   H   S EE+ +LF
Sbjct: 660  VWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLAKTSEHIQFSVEELKNLF 719


>gi|256080936|ref|XP_002576731.1| DNA repair and recombination protein rad54-related [Schistosoma
            mansoni]
 gi|360045008|emb|CCD82556.1| DNA repair and recombination protein rad54-related [Schistosoma
            mansoni]
          Length = 832

 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 192/639 (30%), Positives = 309/639 (48%), Gaps = 119/639 (18%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   +S  L+ HQ  G++FM++     +  V+  +   GCI+A  MGLGKT Q I  +
Sbjct: 183  VVVDPMLSKILRPHQREGVKFMYD----CVTGVQIPNNH-GCIMADEMGLGKTLQCITLI 237

Query: 774  YTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
            +T +R    G   +  A+IVTP ++L NW  EF KW   ++ PL +   +  S++     
Sbjct: 238  WTLLRQGPEGKPIIDKAVIVTPSSLLRNWYNEFQKWLHGKIHPLAI---DSGSKEDIDSK 294

Query: 831  LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHM 884
            LA + ++ G      + +I Y  FR            +   + H    G  +++CDE H 
Sbjct: 295  LAGFLSQAGRRIPSPILIISYETFR------------LHASVLHKGSVG--LVLCDEGHR 340

Query: 885  IKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNP 944
            +KN+   T QAL Q+KC RR+ L+G+P+QN+L+EY+ +V FV  G LG++ EFR  ++ P
Sbjct: 341  LKNSENQTYQALVQLKCPRRVLLSGTPIQNDLLEYFSLVHFVNMGLLGTASEFRRHYEIP 400

Query: 945  IENGQHTNSTSEDVK----IMNQRSHIL--YEQLKGFVQRMDMN----VVKKDLPPKTV- 993
            I  G+  ++T+ED K    I+ + +  L  +E+L G V R  +     ++ K LP K + 
Sbjct: 401  ILRGRDADATNEDQKKGEEILQEYNCYLIPFEKLLGIVTRCIIRRTQALLTKYLPVKMIT 460

Query: 994  ------FVITVKLSPL-----------------QRRLYKRF-------LDLHGFTNDRVS 1023
                  + +    SPL                 QR +Y  F       + L     D + 
Sbjct: 461  YTLVVFYWLYTLFSPLLFSVSVEQVVCCNLVGSQREVYSDFVKRMAREVSLKMNIADGLR 520

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 1083
            N+K+  S  A    L ++ NHP                            ++V  +   N
Sbjct: 521  NDKLSISSLASITHLKKLCNHP----------------------------DLVYEKMTAN 552

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC-SNMGDKSLVFSQ 1142
             + F    N   +F  ++   L    + K  + SGK  +L  +L +  S   DK ++ S 
Sbjct: 553  TDGF---HNALSYFPANYQGSLESNASVKP-ELSGKFQVLDCLLAVIKSTTSDKVVLISN 608

Query: 1143 SIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKC 1202
               TLDL E                ++G ++ RLDG     +R K+VE+FN+P   R   
Sbjct: 609  YTQTLDLFE------------RLCLQRGYNFVRLDGTMTIKKRAKVVEQFNDP-TSRDFV 655

Query: 1203 TLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTME 1262
             ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  + YRL++ GT+E
Sbjct: 656  FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKQCYIYRLISTGTIE 715

Query: 1263 EKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLFEF 1300
            EK+ +RQ  K+ L++ VVD+Q +V R  S +++  LF +
Sbjct: 716  EKMLQRQAHKKALSSCVVDQQEEVERHFSLDDLRELFMY 754


>gi|195161916|ref|XP_002021802.1| GL26701 [Drosophila persimilis]
 gi|292630865|sp|B4GS98.1|RAD54_DROPE RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=Protein okra
 gi|194103602|gb|EDW25645.1| GL26701 [Drosophila persimilis]
          Length = 782

 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 186/608 (30%), Positives = 300/608 (49%), Gaps = 108/608 (17%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +A ++T +
Sbjct: 148  LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVALVWTLL 199

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELL--- 831
            +        +   +IV+P +++ NW++EF KW    +  L    +E  S++     L   
Sbjct: 200  KQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKENTVRALEQF 256

Query: 832  ---AKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               A  R    V LI Y  FR            +  EI    + G  +++CDE H +KN+
Sbjct: 257  SMNASTRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNS 302

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               T QAL  +K +RR+ L+G+P+QN+L EY+ +V+FV    LG++ +F+  F+N I  G
Sbjct: 303  DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRG 362

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            Q+ +ST ++     +++  L + +   + R    ++ K LP K   VI  KL+P+Q +LY
Sbjct: 363  QNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLY 422

Query: 1009 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 1059
              FL      +D+V        EK   +  A    L ++ +HP ++       +KG+   
Sbjct: 423  TNFLK-----SDQVRRSLADCKEKASLTALADITTLKKLCSHPNLICEKIAAGEKGF--- 474

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRN-MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
               E+S +   ++YN      P+  +N  L GK                   +K LD+  
Sbjct: 475  ---ENSQNILPINYN------PKGEINPELSGK-------------------FKLLDFM- 505

Query: 1119 KMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
                   +  + ++  DK ++ S    TLDL E     L R  K G        + RLDG
Sbjct: 506  -------LAAIRAHGNDKVVLISNYTQTLDLFEL----LARKRKYG--------FVRLDG 546

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
                 +R K+V+RFN+P      C L  +S++AG  G+NL  ANR+ + D  WNP  D Q
Sbjct: 547  TMSIKKRSKVVDRFNDP---ESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQ 603

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEML 1295
            A+ R WR GQ KP + YRL+A G++EEKI +RQ  K+ L++ ++D  +   +  +++++ 
Sbjct: 604  AMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLK 663

Query: 1296 HLFEFGDD 1303
             LF F  D
Sbjct: 664  DLFSFDPD 671


>gi|406603681|emb|CCH44834.1| DNA repair and recombination protein [Wickerhamomyces ciferrii]
          Length = 839

 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 187/617 (30%), Positives = 289/617 (46%), Gaps = 102/617 (16%)

Query: 708  EKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGL 763
            ++G++   +P  I  KL    + HQV G++F++  +   +       +  GCI+A  MGL
Sbjct: 227  DEGKKFPDVPVIIDPKLTKILRPHQVEGVKFLYRCVSGLV-----DPRAKGCIMADEMGL 281

Query: 764  GKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE 820
            GKT Q IA ++T ++    G +T    ++V P +++ NW  E  KW             +
Sbjct: 282  GKTLQCIALMWTLLKQGPRGKKTIDKCIVVCPSSLVRNWANELTKWLGEGAPTPLAIDGK 341

Query: 821  DVSRDRRAELLAKWR-AKG-----GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP 874
                +     + +W  AKG      V +I Y   R              R + +      
Sbjct: 342  STKPNEVGSSIQQWSLAKGRNVVRPVLIISYETLR--------------RNVENLKNTEI 387

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
             +L+ DE H +KN  + T  +L  + C+RR+ L+G+P+QN+L EY+ +++F   G LG+ 
Sbjct: 388  GLLLADEGHRLKNGDSLTFTSLDSLNCKRRVILSGTPIQNDLSEYFALLNFANPGLLGTR 447

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
             EFR  F+ PI  G+  ++T ++V+   ++  +L   +  F+ R   +++ K LP K   
Sbjct: 448  IEFRKNFEIPILKGRDADATDKEVEDGQKKLGMLSTIVSKFIIRRTNDILSKYLPCKYEH 507

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-FAGYQALAQIW------NHPGI 1047
            VI V LSP+Q +LY  F          +++  I+K     G Q L  I       NHP +
Sbjct: 508  VIFVNLSPMQEKLYHHF----------ITSPDIKKLLKGVGSQPLKAIGLLKKLCNHPDL 557

Query: 1048 LQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
            + L         ED E S                            D     D+ N +  
Sbjct: 558  INLD--------EDFEGS----------------------------DHLIPDDYINSITG 581

Query: 1108 EHTYKELDY--SGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQG 1164
                +E+    SGK  +L   L  +     DK ++ S    TLDLIE    K+ R    G
Sbjct: 582  GGRNREVQTWQSGKFSILERFLAKIKKESNDKIVLISNYTQTLDLIE----KMCRHNHYG 637

Query: 1165 KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
             L        RLDG    ++RQKLV+RFN+P +      L+S++AG  GINL  ANR+I+
Sbjct: 638  NL--------RLDGTMNINKRQKLVDRFNDPESPEF-IFLLSSKAGGCGINLIGANRLIL 688

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
            +D  WNP  D QA+ R WR GQ K  F YR +  G++EEKI++RQ  K  L++ VVD  Q
Sbjct: 689  IDPDWNPASDQQALARVWRDGQKKDCFIYRFITTGSIEEKIFQRQSMKMSLSSCVVDENQ 748

Query: 1285 -VHRTISKEEMLHLFEF 1300
             V R  S + +  LF+F
Sbjct: 749  DVERLFSTDNLRQLFQF 765


>gi|312071167|ref|XP_003138483.1| hypothetical protein LOAG_02898 [Loa loa]
 gi|307766356|gb|EFO25590.1| hypothetical protein LOAG_02898 [Loa loa]
          Length = 755

 Score =  250 bits (638), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 189/602 (31%), Positives = 289/602 (48%), Gaps = 96/602 (15%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +SA L+ HQ  G++FM++ +     ++ S     GCI+A  MGLGKT Q I  ++T +R 
Sbjct: 138  LSAILRPHQREGVKFMYDCVTGV--RIPSAH---GCIMADEMGLGKTLQCITLMWTLLRQ 192

Query: 780  ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRA 836
                   L  A+IV P +++ NW +E  KW    +  L V   +   +D     L K+ +
Sbjct: 193  GPDAKPTLNKAVIVCPSSLVKNWDKEIRKWLGGRVNALPV---DSGGKDEIDRNLEKFMS 249

Query: 837  KGGV------FLIGYTAFRNLSFGKHVKDRNMAREICHA---LQDGPDILVCDEAHMIKN 887
            + GV       +I Y  FR                  HA   LQ    +++CDE H +KN
Sbjct: 250  QMGVRCPTPVLIISYETFR-----------------LHASILLQKEIGLIICDEGHRLKN 292

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
            +   T QAL  +KC+RR+ ++G+P+QN+L+EYY +++FV  G LG++ EF+ RF+N I  
Sbjct: 293  SDNQTYQALFGLKCERRVLISGTPIQNDLLEYYSLINFVNPGLLGTASEFKRRFENIILR 352

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            G+  ++T    +  +     +   +   V R    ++ K LP K   +I  KL+ LQ +L
Sbjct: 353  GRDADATDAQREKGDAALTEMSSIVSRCVIRRTSALLTKYLPVKYELIICCKLTELQEKL 412

Query: 1008 YKRFLDLH--GFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDS 1065
            Y++ +     G        +KI  +  +    L ++ NHP   QL  +K     E  E  
Sbjct: 413  YRQLISTFSMGGKQKVTEGDKITGTALSFITNLKKLCNHP---QLIFNKCQKKEEGFEGC 469

Query: 1066 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLD 1125
                     +  GE  R       GK                    K LDY      LL 
Sbjct: 470  -------LKLFPGEFGRKFEPAFSGK-------------------MKVLDY------LLA 497

Query: 1126 ILTMCSNMGDKSLVFSQSIPTLD-LIEF-YLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
                 +N  DK ++ S    T+D  +E   L + P              + RLDG     
Sbjct: 498  ATRTTTN--DKFVLVSNYTQTIDAFVELCQLRRYP--------------YIRLDGTCTIK 541

Query: 1184 ERQKLVERFNEPLNKRVKCT-LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1242
            +R KLVE+FN+P  K V+   L+S++AG  G+NL  ANR+I+ D  WNP  D QA+ R W
Sbjct: 542  QRAKLVEKFNDP--KSVEYVFLLSSKAGGCGLNLIGANRLIMFDPDWNPANDDQAMARVW 599

Query: 1243 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFG 1301
            R GQ K  F YRL+A G++EEK+++RQ  K+ L++ V+D    V R  SK+++ HLF+  
Sbjct: 600  RDGQRKNCFIYRLLASGSIEEKMFQRQAHKKALSSCVIDEASDVARHFSKDQLRHLFDLK 659

Query: 1302 DD 1303
             D
Sbjct: 660  AD 661


>gi|354505095|ref|XP_003514607.1| PREDICTED: putative DNA repair and recombination protein RAD26-like,
            partial [Cricetulus griseus]
          Length = 1141

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 195/643 (30%), Positives = 286/643 (44%), Gaps = 129/643 (20%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   IP +I+  L+ +Q  G +F++ + IQ          G GCIL   MGLGKT QVI
Sbjct: 108  EDGDSIPYTINRYLRDYQREGAQFLYRHYIQ----------GRGCILGDDMGLGKTIQVI 157

Query: 771  AFLYTAMR-----------------------SVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            +FL   +                          +   +  L+V P++VL+NWK E   W 
Sbjct: 158  SFLAAVLHKKGTREDIENNMPEFLLKSMKKEPSSTAQKMFLVVAPLSVLYNWKDELDTW- 216

Query: 808  PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   RV +L    +D    LL   + K  + L  Y   R            +  E  
Sbjct: 217  ----GYFRVTVLHGSKKD--IGLLRLKQRKCEIALTTYETLR------------LCLEEL 258

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            ++L+     ++ DEAH IKN +A  TQ +K +KC+ RI LTG+ LQNN+ E +C++D+  
Sbjct: 259  NSLEWS--AVIVDEAHRIKNPKARVTQVMKALKCKVRIGLTGTVLQNNMKELWCVMDWAV 316

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
             G LGS   F+ +F +P+E+GQ   +T  ++    +  H L +++ G   R    ++K  
Sbjct: 317  PGLLGSKSYFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGCFLRRTKTLIKGQ 376

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGF------------------------TNDRVS 1023
            LP K   ++   L+  Q+ +Y+  L+                            TN +  
Sbjct: 377  LPKKEDRMVYCSLTEFQKAVYQTVLETEDVALILQSSQPCTCGSGRKRRNCCYKTNSQ-- 434

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNV---VIGEK 1080
             +K+R    +    L ++ NH  +LQ            A  S   E +   +   V    
Sbjct: 435  GDKVRTLCLSYLTVLQKVANHVALLQ-----------TASTSKQQETLIKKICDQVFSRF 483

Query: 1081 PRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVF 1140
            P    DF+Q   D  F             T  +  YSGKM +L  +L       DK L+F
Sbjct: 484  P----DFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHFRKHRDKVLLF 527

Query: 1141 SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRV 1200
            S S   LD+++ Y                G D+ RLDG T+S ER K+V+ FN    K V
Sbjct: 528  SFSTKLLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TKDV 573

Query: 1201 KCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGT 1260
               L+ST AG LG+N   AN VI+ D +WNP  DLQAI RA+R GQ + V   RL++ GT
Sbjct: 574  NICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGT 633

Query: 1261 MEEKIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            +EE +Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 634  VEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 676


>gi|302308020|ref|NP_984796.2| AEL065Cp [Ashbya gossypii ATCC 10895]
 gi|299789257|gb|AAS52620.2| AEL065Cp [Ashbya gossypii ATCC 10895]
 gi|374108017|gb|AEY96924.1| FAEL065Cp [Ashbya gossypii FDAG1]
          Length = 1025

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 188/621 (30%), Positives = 284/621 (45%), Gaps = 118/621 (19%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
             +IP+ I  KL ++Q   +++++E   Q+           G I+   MGLGKT Q+++FL
Sbjct: 253  FKIPADIFDKLFSYQKTCVQWLYELHQQNC----------GGIVGDEMGLGKTIQIVSFL 302

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV----------S 823
             +   S  L     L+V P  V+  W  EF  W P    P R  +L  +          +
Sbjct: 303  ASLHHSGKLK-GPVLVVCPATVMKQWCSEFQTWWP----PFRAVILHSIGAGMITRKKMT 357

Query: 824  RDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKH---------------VKDRNMAREICH 868
             ++  ELL   R +   F   Y  + NL   K                V D ++      
Sbjct: 358  EEQLEELLM--RDESNEF--SYEQYANLGRTKKQLEARRGIESLVQKVVDDGHILITTYL 413

Query: 869  ALQDGPDIL--------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
             LQ   D+L        V DE H I+N  A  +   K+++   RI L+G+P+QNNL E +
Sbjct: 414  GLQIHSDLLLHVNWDYAVLDEGHKIRNPDAGISLTCKRLRTPHRIILSGTPIQNNLTELW 473

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
             + DF+  G LG+   F+ +F NPI  G + N+T+  V+   + +  L + +  ++ R  
Sbjct: 474  SLFDFIFPGKLGTLPVFQQQFANPINAGGYANATNIQVQTGYKCAVALRDLISPYLLRRV 533

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQ 1040
             N V KDLP K  FV+  K++  Q+  Y +FL+    + D +  +  R+    G   L +
Sbjct: 534  KNDVAKDLPKKNEFVLFCKMTQFQKEKYLQFLN----SEDMIKIKNGRRQVLYGIDILRK 589

Query: 1041 IWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD 1100
            I NHP +L+                                    DF +           
Sbjct: 590  ICNHPDLLE-----------------------------------RDFRK----------- 603

Query: 1101 WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                  HE ++ +   SGKM ++  +L      G K+L+F+QS   LD++E Y+S     
Sbjct: 604  ------HEPSFGDPRRSGKMTVIKQLLLTWKKQGHKALLFTQSRQMLDILEAYISH---- 653

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
             K  +L   G  + R+DG T  + RQ LV+RFN   N      L++TR G LG+NL  AN
Sbjct: 654  -KDPEL--AGLQYLRMDGTTNIAHRQALVDRFN---NGPYHLFLLTTRVGGLGVNLTGAN 707

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+II D  WNP+ DLQA  RAWR GQ + V  Y LM  G++EEKIY RQ+ K+ L  +V+
Sbjct: 708  RIIIFDPDWNPSTDLQARERAWRIGQKRDVTIYLLMVAGSIEEKIYHRQIFKQFLTNKVL 767

Query: 1281 DRQQVHRTISKEEMLHLFEFG 1301
               +  R     E+  LF FG
Sbjct: 768  SDPKQKRFFKMNELHDLFSFG 788


>gi|242010572|ref|XP_002426039.1| DNA repair and recombination protein RAD26, putative [Pediculus
            humanus corporis]
 gi|212510049|gb|EEB13301.1| DNA repair and recombination protein RAD26, putative [Pediculus
            humanus corporis]
          Length = 1206

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 182/614 (29%), Positives = 281/614 (45%), Gaps = 101/614 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +   ++PS I  KL  +Q VG++++WE  IQ            G IL   MGLGKT Q+I
Sbjct: 329  DNGFKMPSIIWNKLFKYQRVGVQWLWELNIQQC----------GGILGDEMGLGKTIQII 378

Query: 771  AFLYTAMRSVNL-------GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED-- 821
            AFL     S  L       GL   LIV P  V+H W +EF KW P      RV +L +  
Sbjct: 379  AFLAGLSVSKLLSRHGYFRGLGPVLIVCPTTVMHQWVREFHKWWPQ----FRVALLHESG 434

Query: 822  VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 881
                ++ +L+       G+ +  Y      S        ++ R+  H        ++ DE
Sbjct: 435  TYHGKKYDLIKNIIKSNGILITSYITCLQQS-------SDLQRQKWH-------YVILDE 480

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
             H I+N  +     +K +    R+ L+GSP+QNNL E + + DF+  G LG+   F   F
Sbjct: 481  GHKIRNPDSQIAINIKLLNTPHRLILSGSPIQNNLKELWSLFDFIFPGKLGTLPVFLAEF 540

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK--DLPPKTVFVITVK 999
              PI  G + N++   V    + + +L + +  ++ R     VK   +LPPK   V+  +
Sbjct: 541  GVPITQGGYANASKVQVLTAYKCATVLRDTISPYLLRRAKEDVKTHINLPPKNEQVLFCR 600

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR 1059
            L+  Q+ LY  +L+  G  N+  +    ++  F G   L +I NHP +       G P  
Sbjct: 601  LTNEQKELYVNYLN-SGSVNEIFNG---KQKLFVGLINLRKICNHPHLYS-----GGPKH 651

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
               +D                     +F+  +N  G+++K                 +GK
Sbjct: 652  VKLDDL--------------------EFIPEENKFGYWKK-----------------AGK 674

Query: 1120 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIE-FYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
            M+++  +L +    G + L+F+QS   L ++E F LS+               ++ +LDG
Sbjct: 675  MIVMETLLKIWKKQGHRVLIFTQSRKMLSILENFVLSQ-------------NYEYLKLDG 721

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
             T    RQ L+ +FNE   K+    L +T  G LG+NL  ANRV+I D  WNP  D+QA 
Sbjct: 722  TTNIGSRQPLINKFNEE--KKYYIFLSTTHVGGLGVNLTGANRVVIYDPDWNPATDMQAR 779

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLF 1298
             RAWR GQ   V  YRL+  GT+EEKIY RQ+ K+ L  +V+      R     ++  LF
Sbjct: 780  ERAWRIGQENQVTIYRLVTSGTIEEKIYHRQIFKQFLTNKVLKDPSQRRFFKSNDLYELF 839

Query: 1299 EFGDDENPDPLTAV 1312
             + DDE  +  +A+
Sbjct: 840  TYKDDEYSNETSAI 853


>gi|440906247|gb|ELR56532.1| DNA repair and recombination protein RAD54B [Bos grunniens mutus]
          Length = 911

 Score =  249 bits (637), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 191/605 (31%), Positives = 301/605 (49%), Gaps = 95/605 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPHLVYYLRPHQKEGITFLYECVM-GMRV----NGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW   E   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPIVKKTLIVTPGSLVNNWKKEFQKWLGIER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K+VK                D+L+CDE H +KN+
Sbjct: 396  EFTK-SPFYSVLIISYEMLLRSLDQIKNVKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  TIKTTTALISLSCEKRIILTGTPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIIS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  QR+  L      F+ R    V+ + LPPK   V+  +   LQ  LY
Sbjct: 500  RQPSASEEERELGEQRAAELTCLTGLFILRRTQEVINQYLPPKIENVVFCRPGALQIALY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +         S      AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQAVRFCLQGLLEN--------TSHLICIGALKKLCNHPCLL-------FGSIKE 604

Query: 1062 AEDSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKM 1120
             E +S+ DE+ + N+  G     MN F    N   F +++                SGK+
Sbjct: 605  KESNSTWDESEERNLYEGL----MNVFPADYNPIMFTEEE----------------SGKL 644

Query: 1121 VLLLDILTMCSNM-----GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             +L  +L +   +     G   LV S    TLD++            Q    + G  + R
Sbjct: 645  QVLSKLLAVIRELRPEVRGQVVLV-SNYTRTLDIL------------QEVCKRHGYAYTR 691

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 692  LDGQTPISQRQQIVDGFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 750

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL+  V+D  +   H   S EE
Sbjct: 751  QAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVIDLSKTSDHIQFSVEE 810

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 811  LKNLF 815


>gi|296226943|ref|XP_002759149.1| PREDICTED: DNA repair and recombination protein RAD54B [Callithrix
            jacchus]
          Length = 910

 Score =  249 bits (637), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 187/605 (30%), Positives = 298/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 287  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 341

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 342  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 396

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K +K                DIL+CDE H +KN+
Sbjct: 397  EFIK-SVFYSVLVISYEMLLRSLDQIKDIKF---------------DILICDEGHRLKNS 440

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C +RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 441  AIKTTTALISLSCDKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 500

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   V+  +   LQ  LY
Sbjct: 501  REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPVALQIELY 560

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 561  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 605

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  ++   P + N  L       F +K+                S
Sbjct: 606  KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 642

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   ++ ++ S    TL+++            Q    + G  + R
Sbjct: 643  GKLQVLSKLLAVIHELRPTERVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 690

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +  V   L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 691  LDGQTPISQRQQIVDGFNSQ-HSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 749

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE
Sbjct: 750  QAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSLEE 809

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 810  LKNLF 814


>gi|327308794|ref|XP_003239088.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
            118892]
 gi|326459344|gb|EGD84797.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
            118892]
          Length = 808

 Score =  249 bits (637), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 187/625 (29%), Positives = 298/625 (47%), Gaps = 97/625 (15%)

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK 751
            E+LG      I   V E+ +  V I   ++  L+ HQ+ G++F++      + K      
Sbjct: 189  EILG------IKKNVDERPKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDK-----N 237

Query: 752  GLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR 807
              GCI+A  MGLGKT Q I  ++T ++ S   G   ++ A+I  P  ++ NW  E +KW 
Sbjct: 238  AHGCIMADGMGLGKTLQCITLMWTLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWL 297

Query: 808  PSELKPLRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDR 860
              +   +  F+++   S+      L +W    G      V ++ Y   R  S    ++D 
Sbjct: 298  GKD--AINPFVIDGKASKTELTSQLRQWAIASGRSVVRPVLIVSYETLRMNS--DELRDT 353

Query: 861  NMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
             +             +L+CDE H +KN  + T  AL ++  Q+R+ L+G+P+QN+L EY+
Sbjct: 354  QIG------------LLLCDEGHRLKNADSQTYVALNKLNVQKRVILSGTPIQNDLSEYF 401

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
             ++DF   G LGS  EF   ++ PI  G+  + T E  K  N+R   L   +  F+ R  
Sbjct: 402  SLLDFANPGILGSRSEFHKTYEIPILRGRDADGTDEQQKKGNERLAELLNLVNKFIIRRS 461

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQA 1037
             +++ K LP K   V+   LSP Q  LY  F+   ++      + S              
Sbjct: 462  NDLLSKYLPVKYEHVVFCNLSPFQLDLYNHFIQSPEIKSLLRGKGSQP------LKAIGI 515

Query: 1038 LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
            L ++ NHP +L+L++D     +   ED +                 +++  +G  +    
Sbjct: 516  LKKLCNHPDLLKLSEDLPGCEQYFPEDMT-----------------VSNGRRGDRE---- 554

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSK 1156
             K W              YSGKM++L  +L  +  +  DK ++ S    TLDL E    +
Sbjct: 555  AKTW--------------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----R 596

Query: 1157 LPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
            L R    G +        RLDG     +R KLV++FN+P N      L+S++AG  GINL
Sbjct: 597  LCRARAYGCI--------RLDGTMGVKKRSKLVDKFNDP-NGEEFVFLLSSKAGGCGINL 647

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              ANR+++ D  WNP  D QA+ R WR GQ+K  F YR +A GT+EEKI++RQ  K+ L+
Sbjct: 648  VGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLS 707

Query: 1277 ARVVDR-QQVHRTISKEEMLHLFEF 1300
            + V+D  + V R  S + +  LF+F
Sbjct: 708  SCVIDSAEDVERHFSLDSLRELFQF 732


>gi|331227507|ref|XP_003326422.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f.
            sp. tritici CRL 75-36-700-3]
          Length = 939

 Score =  249 bits (637), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 186/611 (30%), Positives = 288/611 (47%), Gaps = 107/611 (17%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +S  L+ HQV G++F++     +   V+ G KG  CI+A  MGLGKT Q I  L+T ++ 
Sbjct: 349  LSKTLRPHQVEGVKFLYRC---ATGMVEQGAKG--CIMADEMGLGKTLQCITLLWTLLKQ 403

Query: 780  VNLG----LRTALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRAELLA-- 832
              +     +  A++  P +++ NW  EF KW  P  + PL V       +  +A LL   
Sbjct: 404  SPIAGKPSIEKAIVACPSSLVKNWANEFDKWLGPGAINPLAV-----DGKQTKANLLTSV 458

Query: 833  -KWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHM 884
             +W +  G      V ++ Y   R                +   L   P  +L+CDE H 
Sbjct: 459  RQWVSATGRRVPQPVMIVSYETLRG--------------TLVEELGRTPVGLLLCDEGHR 504

Query: 885  IKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNP 944
            +KN    T  AL  + C+RR+ LTG+P+QN+L EY+ +++F    +LG   +FR  ++ P
Sbjct: 505  LKNADNQTYAALNGINCERRVILTGTPIQNDLSEYFALLNFANPNYLGDRAQFRKSYELP 564

Query: 945  IENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQ 1004
            I  G+ ++S+  +V +   +   L  +++ F+ R   +++ K LP K   V+    S  Q
Sbjct: 565  ILRGRDSDSSESEVALAEAKLKELTTKVQKFIIRRTNDLLSKYLPVKYEHVVFCAPSAFQ 624

Query: 1005 RRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALA------QIWNHPGILQLTKDKGYPS 1058
              LY+ F+D           +K+ +    G Q L       ++ NHP +L L +D   P 
Sbjct: 625  LDLYRHFIDSPDL-------QKLLRG--VGCQPLKMLGILRKLCNHPDLLDLQQD--IPG 673

Query: 1059 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
             E                                 DG+  KD              + SG
Sbjct: 674  SEKY-----------------------------FPDGYRSKD-------PRAPARPELSG 697

Query: 1119 KMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            KM +L   L  + +   DK ++ S    TLD++E    K+ R  + G L        RLD
Sbjct: 698  KMTVLERFLHKIKTETTDKIVLISNFTQTLDVME----KMCRERRWGNL--------RLD 745

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G  + ++RQKLV+RFN+P  K     L+S++AG  GINL  ANR+I+ D  WNP  D QA
Sbjct: 746  GTMQITKRQKLVDRFNDPEGKEF-IFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQA 804

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH-RTISKEEMLH 1296
            + R WR GQ K  F YR +  G++EEK+++RQ  K  L+A VVD Q+   R  S+E +  
Sbjct: 805  LARVWRDGQKKNCFVYRFILTGSVEEKVFQRQSQKMKLSASVVDEQEDEARMFSRESLKE 864

Query: 1297 LFEFGDDENPD 1307
            LF   ++   D
Sbjct: 865  LFRLNENTQSD 875


>gi|326670150|ref|XP_689596.5| PREDICTED: hypothetical protein LOC553504 [Danio rerio]
          Length = 1269

 Score =  249 bits (637), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 187/617 (30%), Positives = 285/617 (46%), Gaps = 112/617 (18%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V++P +I+  L+ +Q  GI+F+++N  +S           GCIL   MGLGKT QVI FL
Sbjct: 50   VKVPYTINRYLRDYQREGIKFIYQNYAKS----------RGCILGDDMGLGKTVQVIGFL 99

Query: 774  YTAMRSVNLG--------------------LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
               ++                          +  +IV P++VL+NWK E   W       
Sbjct: 100  AAVLQKTGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDELDTW-----GH 154

Query: 814  LRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG 873
             RV ++  V +D   EL    R +  + L  Y   R L   +     N A          
Sbjct: 155  FRVVVVHGVRKDE--ELARVQRGRCEIALTTYETLR-LCLDQ-FNSINWA---------- 200

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
               ++ DEAH IKN ++  TQA+KQ++C+ RI LTG+ LQNNL E +C++++     LGS
Sbjct: 201  --AVIVDEAHKIKNHKSKITQAVKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRCLGS 258

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
               F+NRF +PIE GQ    T   +    +    L ++L  +  R   +++   LP K  
Sbjct: 259  LGAFKNRFSDPIEKGQKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKSLISDQLPKKDD 318

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEK----------------------IRKSF 1031
             V+   L+  QR +Y+  LD    T    S+ K                      +R  +
Sbjct: 319  RVVYCSLTDFQRTVYRAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKLNADGVPVRHLY 378

Query: 1032 FAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKP-RNMNDFLQG 1090
            F+    L ++ NH  +LQ            ++D +S +   Y   I E+  R   DF + 
Sbjct: 379  FSYLAILRKVANHVALLQ------------SKDGTSKKQEKYVTTICEQVFRKFPDFTER 426

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
                 F                +  YSGKM ++  +L       DK L+FS S   LD++
Sbjct: 427  CKQAAF------------EAMSDPMYSGKMKVMQKLLNHFIAKKDKVLLFSLSTKLLDVL 474

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E Y               +G +++RLDG T+S +R K+V+ FN   ++ V   L+ST AG
Sbjct: 475  ESY------------CMAEGLEYHRLDGNTKSKDRVKIVKEFNS--SRDVNLCLVSTLAG 520

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
             LG+N   AN V++ D +WNP  DLQAI R +R GQ + V  +RL++ GT+EE IY RQV
Sbjct: 521  GLGLNFIGANVVVLFDPTWNPANDLQAIDRVYRIGQCRDVTVFRLISLGTVEEIIYLRQV 580

Query: 1271 TKEGLAARVVDRQQVHR 1287
             K+ L + V+ ++   R
Sbjct: 581  YKQQLQSSVIGQENARR 597


>gi|66813000|ref|XP_640679.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
 gi|60468700|gb|EAL66702.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1655

 Score =  249 bits (637), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 182/597 (30%), Positives = 281/597 (47%), Gaps = 103/597 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E  +IP  I   L  +QV  +R+++E   Q            G I+   MGLGKT Q++
Sbjct: 782  DENFKIPFDIYKNLFEYQVTCVRWLYELHCQET----------GGIVGDEMGLGKTVQIV 831

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR---- 826
            +FL +   S  LG   ALIV P  +L NW +EF KW P    P RV +            
Sbjct: 832  SFLASLHYSRRLG-GPALIVAPATLLSNWIKEFHKWWP----PFRVGLFHSSGSGGGGND 886

Query: 827  ---RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAH 883
               + +++ K   KG + L  + + R            + +EI   L+   + ++ DE H
Sbjct: 887  GSDKEDIVKKIAEKGHILLTTFDSIR------------INQEIL--LKYHWEYVILDEGH 932

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
             I+N  A+ T + KQ++   R+ L+GSP+QN L E + + DFV  G LG+   F+++F  
Sbjct: 933  KIRNPDAEITLSCKQLQTPHRVILSGSPIQNKLTELWSLFDFVFPGRLGTLPIFKSQFSL 992

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            PI  G   N++   V+   + +  L + +  ++ R   + V K LP K   V+   L+P 
Sbjct: 993  PISVGGFANASPIQVQAAYKCAVALRDLISPYMLRRVKSDVLKSLPSKNEQVLMCPLTPF 1052

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAE 1063
            Q +LY  FLD    +ND  S    R++   G   L +I NHP IL +          DA 
Sbjct: 1053 QEKLYLEFLD----SNDIKSVLDGRRNALYGIDILKKICNHPDILHM----------DAS 1098

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
            D              ++P                           H Y  ++ S K+ ++
Sbjct: 1099 DE-------------DRP---------------------------HDYGNIERSAKLKVV 1118

Query: 1124 LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
              IL +    GDK L+F Q+   LD++E Y+    R   Q        ++ R+DG T   
Sbjct: 1119 ETILPLWFKQGDKVLLFCQTRQMLDIVEQYI----RDSTQF-------NYLRMDGTTSIR 1167

Query: 1184 ERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1243
            +RQ LVE+FN  ++  +   L++T+ G LG+NL  ANRVI+ D  WNP+ D+QA  R +R
Sbjct: 1168 QRQCLVEQFN--IDPSLFIFLLTTKVGGLGLNLTGANRVILFDPDWNPSTDMQARERVYR 1225

Query: 1244 YGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
             GQ K V  YRL+  GT+EEKIY RQ+ K+ L  +++   +  R    +    LF +
Sbjct: 1226 IGQKKAVTIYRLITLGTIEEKIYHRQIYKQFLTNKILKDPRQKRFFKSKHFKDLFTY 1282


>gi|6912622|ref|NP_036547.1| DNA repair and recombination protein RAD54B isoform 1 [Homo sapiens]
 gi|51316548|sp|Q9Y620.1|RA54B_HUMAN RecName: Full=DNA repair and recombination protein RAD54B; AltName:
            Full=RAD54 homolog B
 gi|4959396|gb|AAD34331.1|AF112481_1 RAD54B protein [Homo sapiens]
 gi|12805023|gb|AAH01965.1| RAD54 homolog B (S. cerevisiae) [Homo sapiens]
 gi|119612119|gb|EAW91713.1| hCG2009220, isoform CRA_c [Homo sapiens]
 gi|261859006|dbj|BAI46025.1| RAD54 homolog B [synthetic construct]
          Length = 910

 Score =  249 bits (637), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 186/605 (30%), Positives = 299/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   V+  +   LQ  LY
Sbjct: 500  REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  ++   P + N  L       F +K+                S
Sbjct: 605  KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 641

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + R
Sbjct: 642  GKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 689

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 690  LDGQTPISQRQQIVDGFNSQ-HSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 748

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE
Sbjct: 749  QAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEE 808

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 809  LKNLF 813


>gi|158261897|dbj|BAF83126.1| unnamed protein product [Homo sapiens]
          Length = 910

 Score =  249 bits (637), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 186/605 (30%), Positives = 299/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   V+  +   LQ  LY
Sbjct: 500  REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  ++   P + N  L       F +K+                S
Sbjct: 605  KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 641

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + R
Sbjct: 642  GKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 689

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 690  LDGQTPISQRQQIVDGFNSQ-HSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 748

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE
Sbjct: 749  QAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEE 808

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 809  LKNLF 813


>gi|213402947|ref|XP_002172246.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus
            yFS275]
 gi|212000293|gb|EEB05953.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus
            yFS275]
          Length = 749

 Score =  249 bits (637), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 188/595 (31%), Positives = 288/595 (48%), Gaps = 100/595 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   ++  L+ HQ  G+ F++ N + SI +  S     G ILA  MGLGKT Q I  L
Sbjct: 124  VVIDPRLAKILQPHQKEGVSFLY-NCLMSIGRHNS----YGAILADEMGLGKTLQTITVL 178

Query: 774  YTAMRSVNLG-----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 828
            +T ++   +      L+  +IV+PV +L NWK EF+KW  +E    R+ ++   S     
Sbjct: 179  WTLLKQNPIANAAPPLKKIMIVSPVTLLQNWKNEFIKWLGTE----RIHVMIAKSTVEFK 234

Query: 829  ELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
            E +        V L+GY   R  SF +   D       C    D  D++VCDE H +K+ 
Sbjct: 235  EFIGN--VSYSVVLVGYEKVR--SFLQDNID-------C----DKIDLVVCDEGHRLKSM 279

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
             + T  AL+++K +RR+ LTG+P+QN+LME+Y MV+F+  G LGS   FR++++ PI   
Sbjct: 280  NSQTGIALQKLKTKRRLLLTGTPIQNDLMEFYAMVNFIMPGVLGSQTSFRSQYELPILRS 339

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  N+++++V + N R   L      FV R  ++V+ + LPP+T   I +K S  Q  LY
Sbjct: 340  RLVNASTKNVLLGNARLERLARYASTFVLRRKIDVLSETLPPRTDVTIFLKPSRSQELLY 399

Query: 1009 KRFLDLHGFTNDR-VSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            +  LD   F  DR + NEK      +    L  + N   ++Q                  
Sbjct: 400  EEHLD--KFWKDRTLENEKTFP--LSTLTELNCLCNSTRLIQ-----------------H 438

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
             EN D          ++ND +   +   F +                       LLL+  
Sbjct: 439  QENTDL---------SLNDLIASSSKFEFLKS----------------------LLLEF- 466

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
                N   K ++ SQ   TL+LIE  L  L                 RLDG T ++ RQ 
Sbjct: 467  ---KNSQLKCVIVSQFTETLNLIEILLKHLLITH------------CRLDGSTPTNTRQS 511

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            LV++FN    + +   L+S ++G  G+NL  ANR+I+ + SWNP YDLQA+ R +RYGQ 
Sbjct: 512  LVDQFNCSTYEHLSVFLLSNKSGGAGLNLVGANRLILFEPSWNPAYDLQALGRIYRYGQN 571

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV--DRQQVHRTISKEEMLHLFEF 1300
            + V  Y L++ G ++E+IY RQ TK GL+   +  D   +      ++M +LF +
Sbjct: 572  RSVLIYTLLSTGMLDEQIYIRQHTKTGLSNAFMDSDTSTLKYKFQMKDMKNLFSY 626


>gi|310795007|gb|EFQ30468.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001]
          Length = 852

 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 188/612 (30%), Positives = 295/612 (48%), Gaps = 93/612 (15%)

Query: 715  RIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            R+P  I  +L    + HQV G++FM+  +   I      +K  GCI+A  MGLGKT Q I
Sbjct: 250  RVPVVIDPRLAKVLRPHQVEGVKFMYRCVTGMIE-----EKANGCIMADEMGLGKTLQCI 304

Query: 771  AFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRV---FMLEDV 822
              L+T ++ S   G   ++ A++  P +++ NW  E +KW  ++ + P  +      E++
Sbjct: 305  TLLWTLLKQSPEAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEEL 364

Query: 823  SRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREICHALQDGPDILVCD 880
            +R  R   +A  R+    V ++ Y   R N+   KH K                 +++CD
Sbjct: 365  TRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI---------------GLMLCD 409

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F     LG+  EFR R
Sbjct: 410  EGHRLKNGDSQTFNALNSLNVTRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKR 469

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKL 1000
            F+ PI  G+  +++  D K  ++    L   +  F+ R   +++ K LP K   V+   L
Sbjct: 470  FELPILRGRDADASEIDRKKGDECLSELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNL 529

Query: 1001 SPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
            +P Q  LY  F+   ++      + S              L ++ NHP +L +       
Sbjct: 530  APFQLDLYNYFITSPEIQALLRGKGSQP------LKAINILKKLCNHPDLLNI------- 576

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                A+D    EN   +  + ++ R       G++ D    K W              YS
Sbjct: 577  ----ADDLPGSENCYPDDYVPKEAR-------GRDRD---IKPW--------------YS 608

Query: 1118 GKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            GKM +L  +L  +  +  DK ++ S    TLDL E    KL R    G L        RL
Sbjct: 609  GKMQVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRAYGCL--------RL 656

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG    ++RQKLV++FN P  +     L+S++AG  G+NL  ANR+++ D  WNP  D Q
Sbjct: 657  DGTMNVNKRQKLVDKFNNPDGEEF-VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQ 715

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEML 1295
            A+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  + V R  S + + 
Sbjct: 716  ALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLR 775

Query: 1296 HLFEFGDDENPD 1307
             LF++    N D
Sbjct: 776  ELFQYRPGTNSD 787


>gi|50546160|ref|XP_500607.1| YALI0B07513p [Yarrowia lipolytica]
 gi|49646473|emb|CAG82840.1| YALI0B07513p [Yarrowia lipolytica CLIB122]
          Length = 807

 Score =  249 bits (636), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 192/635 (30%), Positives = 295/635 (46%), Gaps = 122/635 (19%)

Query: 707  REKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            ++K +E   +P  I  KL    + HQV G++F++      I       K  GCI+A  MG
Sbjct: 194  KQKPKEYPEVPVVIDPKLAKILRPHQVEGVKFLYRATTGLINP-----KAHGCIMADEMG 248

Query: 763  LGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML 819
            LGKT Q IA L+T ++    G   +  A++V P +++ NW  EF+KW    L    V   
Sbjct: 249  LGKTLQCIALLWTLLKQSPQGKGTISKAIVVCPSSLVRNWAAEFVKW----LGEGVVVPY 304

Query: 820  EDVSRDRRAELLAKWR----AKG-----GVFLIGYTAFRNLSFGKHVKDRNMAREICHAL 870
                  + AEL A  R    A+G      V +I Y   R              R++    
Sbjct: 305  AVDGSQKPAELTAGLRQWAEAEGRKVTRPVLIISYDTLR--------------RQVGAIA 350

Query: 871  QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
                 +L+ DE H +KN  + T  AL Q+  +RR+ L+G+P+QN+L+EY+ +++F   G 
Sbjct: 351  DSEVGLLLADEGHKLKNGDSQTFTALNQLNVKRRVILSGTPIQNDLLEYFSLLNFSNPGL 410

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 990
            LG+  EFR  ++ PI  G+  + T +DV+    +   +   +   + R   +++ K LP 
Sbjct: 411  LGTKGEFRKNYEIPILKGRDADGTDKDVEKAEAKLLEMASIVSPLIIRRTNDILSKYLPV 470

Query: 991  KTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA------------L 1038
            K   V+   L+P Q+ LY +F         R S E   +S   G ++            L
Sbjct: 471  KYEHVVFCNLAPFQKSLYVQF---------RTSKEA--RSLLKGEKSSEGTTTLNAIGIL 519

Query: 1039 AQIWNHPGILQLTKD-----KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKND 1093
             ++ NHP +L+L  +     K +P      D     + D                     
Sbjct: 520  KKLCNHPDLLKLPDEIEGCRKVFPDDYAPPDERGSRDRD--------------------- 558

Query: 1094 DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEF 1152
                        ++ H      +S K ++L  +L ++ +   DK ++ S    TLDLIE 
Sbjct: 559  ------------IYPH------FSAKFLILERMLRSINAETNDKIVIISNYTATLDLIE- 599

Query: 1153 YLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
               K+ R  + G L        RLDG    ++R KLV +FN+P  +     L+S++AG  
Sbjct: 600  ---KMCRQRRYGCL--------RLDGTMNINKRAKLVTQFNDPEGQEF-IFLLSSKAGGC 647

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            G+NL  ANR+I++D  WNP  D QA+ R WR GQ K  F YRL+A GT+EEKI++RQ  K
Sbjct: 648  GLNLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFVYRLIATGTIEEKIFQRQSMK 707

Query: 1273 EGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENP 1306
            + L+  VVD  Q V R  S   +  LF + DD  P
Sbjct: 708  QSLSTCVVDEVQDVERHYSMSNLRELFSY-DDATP 741


>gi|195398201|ref|XP_002057711.1| GJ18280 [Drosophila virilis]
 gi|292630877|sp|B4M9A8.1|RAD54_DROVI RecName: Full=DNA repair and recombination protein RAD54-like;
            AltName: Full=Protein okra
 gi|194141365|gb|EDW57784.1| GJ18280 [Drosophila virilis]
          Length = 786

 Score =  249 bits (636), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 181/606 (29%), Positives = 294/606 (48%), Gaps = 111/606 (18%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 777
            +S  L+ HQ  G+RFM+E +         G +G   GCI+A  MGLGKT Q +   +T +
Sbjct: 145  LSNVLRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLTWTLL 196

Query: 778  RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
            R        +  A++V+P +++ NW++EF KW    +  L    +E  S++     L ++
Sbjct: 197  RQSPDCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTTRTLEQF 253

Query: 835  ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
                  R    V LI Y  FR  S   H+        +C   +    +++CDE H +KN+
Sbjct: 254  AMNTATRCGTPVLLISYETFRLYS---HI--------LC---KTEVGMVICDEGHRLKNS 299

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               T QAL  +K +RR+ L+G+P+QN+L EY+ +V+FV    LG+  +F+  F+N I  G
Sbjct: 300  DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTGSDFKRNFENAILRG 359

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            Q+ +ST  + +   +++  L   +   + R    ++ K LP K   V+  KL+ +Q +LY
Sbjct: 360  QNADSTDAERERALEKTQELVGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQLQLY 419

Query: 1009 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 1059
              FL      +D+V        +K   +  A    L ++ NHP ++      ++KG+   
Sbjct: 420  TNFLK-----SDQVRRSLADCTDKTTLTALADITTLKKLCNHPDLIYEKIAAREKGF--- 471

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
                     EN    +    KP+++N  L GK                            
Sbjct: 472  ---------ENSQNVLPPNYKPKDVNPELSGK---------------------------- 494

Query: 1120 MVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
              +LLD +   + +N  DK ++ S    TLDL E    +L R        K+   + RLD
Sbjct: 495  -FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYSYVRLD 541

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            G     +R K+V+RFN+P      C L  +S++AG  G+NL  ANR+ + D  WNP  D 
Sbjct: 542  GTMTIKKRSKVVDRFNDPA---TDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 598

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEM 1294
            QA+ R WR GQ KP + YRL+A G++EEKI +RQ  K+ L++ ++D      +  +++++
Sbjct: 599  QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSSIIDNNDSAEKHFTRDDL 658

Query: 1295 LHLFEF 1300
              LF F
Sbjct: 659  KDLFRF 664


>gi|148673695|gb|EDL05642.1| mCG142038, isoform CRA_b [Mus musculus]
          Length = 886

 Score =  249 bits (636), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 184/591 (31%), Positives = 292/591 (49%), Gaps = 89/591 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  GI F++E ++  +R V       G ILA  MGLGKT Q I+ ++T       G
Sbjct: 274  LRPHQKDGIIFLYECVM-GMRAVGK----CGAILADEMGLGKTLQCISLIWTLQCQGPYG 328

Query: 784  ----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG 839
                ++  LIVTP +++ NW++EF KW  SE   +++F    V +D + E          
Sbjct: 329  GKPVIKKTLIVTPGSLVDNWRKEFQKWLGSER--IKIFT---VDQDHKVEEFIN-STFHS 382

Query: 840  VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQV 899
            V +I Y           ++  +  + I   L      L+CDE H +KN+   TT AL  +
Sbjct: 383  VLIISYEML--------LRSLDQIKTIPFGL------LICDEGHRLKNSSIKTTTALSSL 428

Query: 900  KCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVK 959
             C++ + LTG+P+QN+L E++ +VDFV  G LGS   +R  ++ PI   +  +S+ E+ +
Sbjct: 429  SCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISREPSSSKEERE 488

Query: 960  IMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD------ 1013
            +  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY++ L       
Sbjct: 489  LGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLRSQSVRF 548

Query: 1014 -LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS-DENM 1071
             L G   +         +      AL ++ NHP +L       + S +  E SSS +EN 
Sbjct: 549  CLQGLLEN--------SAHLICIGALKKLCNHPCLL-------FSSVKGKEFSSSCEENE 593

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 1131
            + N+  G     ++ F  G N   F +++                SGK+ +L+ +L +  
Sbjct: 594  ERNLCQGL----LSVFPAGYNPLQFSEEE----------------SGKLQVLVKLLAVIH 633

Query: 1132 NM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
             +   +K ++ S    TL+++E                + G    RLDG+T  S+RQ +V
Sbjct: 634  ELRPTEKVILVSNYRQTLNVLEEVCK------------RHGYACARLDGQTPVSQRQHIV 681

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            + FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+ R WR GQ  P
Sbjct: 682  DSFNSKYSTDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHP 740

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLF 1298
            V  YRL+  GT+EEKIY+RQ++K+GL+  VVD  R   H   S EE+ +LF
Sbjct: 741  VHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEHIQFSVEELKNLF 791


>gi|258577009|ref|XP_002542686.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704]
 gi|237902952|gb|EEP77353.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704]
          Length = 1203

 Score =  249 bits (636), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 182/612 (29%), Positives = 284/612 (46%), Gaps = 102/612 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +   RIP  I   L  +Q  G++++WE   Q +          G I+   MGLGKT QVI
Sbjct: 389  DNGYRIPGDIYPYLFDYQKTGVQWLWELHQQRV----------GGIIGDEMGLGKTIQVI 438

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVS 823
            AFL     S  L     ++V P  V+  W  EF +W P    PLRV +L        ++ 
Sbjct: 439  AFLAGLHYSKKL-TGPVIVVCPPTVMKQWVNEFHRWWP----PLRVSILHTSGSGMVNIK 493

Query: 824  RDRRAE--LLAK-WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV-- 878
            ++  AE  L+++ W       L G          + ++D ++       LQ    +L+  
Sbjct: 494  KESYAEDRLMSEIWEPDRPTRLPGGQKGARRILKRVLEDGHVLITTYAGLQTYASLLIPV 553

Query: 879  ------CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                   DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG
Sbjct: 554  DWSCAILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLG 613

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPK 991
            +   FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  ++V   DLP K
Sbjct: 614  TLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAA-DLPKK 672

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
            T  V+  KL+ +QR  Y+ FL     +N+  S  + R+    G   L +I NHP +    
Sbjct: 673  TEQVLFCKLTRVQRAAYEAFLG----SNEMASIMRGRRDVLYGVDILRKICNHPDL---- 724

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                       E  +  +  DYN   G K                               
Sbjct: 725  ----------PEHRTLSQKSDYNYGSGVK------------------------------- 743

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
                 SGKM ++  ++ +    G K+L+F+Q    LD++E ++  LP           G 
Sbjct: 744  -----SGKMQVVKSLIELWKETGHKTLLFAQHRIMLDILEKFMKSLP-----------GF 787

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
            ++ R+DG T    RQ +V+ FN   +  +   L++T+ G LG+NL  A+RVII D  WNP
Sbjct: 788  NYRRMDGNTPIKIRQSIVDEFN--TDPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNP 845

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            + DLQA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T   
Sbjct: 846  STDLQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQM 905

Query: 1292 EEMLHLFEFGDD 1303
             ++  LF  G+D
Sbjct: 906  SDLHDLFTLGND 917


>gi|367047285|ref|XP_003654022.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
 gi|347001285|gb|AEO67686.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
          Length = 807

 Score =  249 bits (636), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 189/625 (30%), Positives = 300/625 (48%), Gaps = 89/625 (14%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    VV E     V I   ++  L+ HQ+ G++FM+  +   I      +K  GCI+
Sbjct: 192  ILGIKKKVVGEHPRVPVVIDPKLAKVLRPHQIEGVKFMYRCVTGMI-----DEKANGCIM 246

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LK 812
            A  MGLGKT Q I  L+T ++ S + G   ++ A++  P +++ NW  E  KW  ++ + 
Sbjct: 247  ADEMGLGKTLQCITLLWTLLKQSPDAGKTTIQKAIVACPSSLVRNWANELTKWLGADAIT 306

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFRNLSFGKHVKDRNMAREICH 868
            P  +      E+++R  R   +A  RA    V ++ Y   R      +V++         
Sbjct: 307  PFAIDGKASKEELTRQLRQWAIASGRAITRPVIIVSYETLR-----LNVEE--------- 352

Query: 869  ALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
             L++ P  +++CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F  
Sbjct: 353  -LKNTPIGLMLCDEGHRLKNGDSQTFNALNSLNVSRRVILSGTPIQNDLSEYFSLISFAN 411

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LGS  EFR RF+ PI  G+  +++  + K  ++    L   +  F+ R   +++ K 
Sbjct: 412  PDLLGSRLEFRKRFELPILRGRDADASEAERKRGDECLAELLAIVNKFIIRRTNDILSKY 471

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   L+P Q+ LY  F+   D+      + S              L ++ NH
Sbjct: 472  LPVKYEHVVFCNLAPFQQALYNYFITSPDIQALLRGKGSQP------LKAIGILKKLCNH 525

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L L  D     +   +D    E                   +G++ D    K W   
Sbjct: 526  PDLLDLAADLPGCEQYWPDDYVPKEA------------------RGRDRD---IKPW--- 561

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM +L  +L  + ++  DK ++ S    TLDL E    +L R    
Sbjct: 562  -----------YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFE----RLCR---- 602

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
                 +G    RLDG    ++RQKLV++FN+P        L+S++AG  G+NL  ANR++
Sbjct: 603  ----SRGYGCLRLDGTMNVNKRQKLVDKFNDPDGDEF-VFLLSSKAGGCGLNLIGANRLV 657

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  
Sbjct: 658  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSA 717

Query: 1283 QQVHRTISKEEMLHLFEFGDDENPD 1307
            + V R  S + +  LF++  D   D
Sbjct: 718  EDVERHFSLDSLRELFQYRPDTRSD 742


>gi|317143637|ref|XP_001819595.2| DNA repair protein rhp54 [Aspergillus oryzae RIB40]
          Length = 827

 Score =  249 bits (636), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 302/650 (46%), Gaps = 111/650 (17%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMW 736
            LD  L   +  ++LG          +++K E   R+P  I  +L    + HQ+ G++F++
Sbjct: 197  LDAPLVHKSLADILG----------LKKKVETGPRVPVVIDPRLAKVLRPHQIEGVKFLY 246

Query: 737  ENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTP 792
                  + K        GCI+A  MGLGKT Q I+ ++T ++ S   G   ++  +I  P
Sbjct: 247  RCTTGMVDK-----NAHGCIMADGMGLGKTLQCISLMWTLLKQSPEAGKTLIQKCIIACP 301

Query: 793  VNVLHNWKQEFMKWRPSE-LKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGY 845
             +++ NW  E +KW   + + P  V      S+      + +W    G      V ++ Y
Sbjct: 302  SSLVGNWANELVKWLGKDAITPFAVD--GKASKTELTSQIKQWAIASGRAVVRPVLIVSY 359

Query: 846  TAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRR 904
               R                   AL+D P  +L+CDE H +KN  + T  AL  +  QRR
Sbjct: 360  ETLR---------------MYVEALKDSPIGLLLCDEGHRLKNKDSLTWTALNSLNVQRR 404

Query: 905  IALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQR 964
            + L+G+P+QN+L EY+ +++F     LGS +EFR RF+ PI  G+    + ED K  ++ 
Sbjct: 405  VILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAAGSDEDKKKGDEC 464

Query: 965  SHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDR 1021
               L   +  F+ R   +++ K LP K   V+   LS  Q  LY  F+   ++      +
Sbjct: 465  LAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHFIQSPEIRSLLRGK 524

Query: 1022 VSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA--EDSSSDENMDYNVVIGE 1079
             S              L ++ NHP +L L+ D   P  E A  ED    E          
Sbjct: 525  GSQP------LKAIGLLKKLCNHPDLLNLSTD--LPGCEFAFPEDYVPPEA--------- 567

Query: 1080 KPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSL 1138
                     +G++ D    K W              YSGKM++L  +L  +  +  DK +
Sbjct: 568  ---------RGRDRD---IKSW--------------YSGKMMVLDRMLARIRQDTNDKIV 601

Query: 1139 VFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNK 1198
            + S    TLDL E    KL R    G L        RLDG    ++RQKLV++FN P  +
Sbjct: 602  LISNYTQTLDLFE----KLCRSRGYGSL--------RLDGTMNVNKRQKLVDKFNNPDGE 649

Query: 1199 RVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAH 1258
                 L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A 
Sbjct: 650  EF-VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 708

Query: 1259 GTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            G++EEKI++RQ  K+ L++ VVD  + V R  S E +  LF+F  +   D
Sbjct: 709  GSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPETRSD 758


>gi|238487360|ref|XP_002374918.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus NRRL3357]
 gi|220699797|gb|EED56136.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus NRRL3357]
          Length = 682

 Score =  249 bits (636), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 192/625 (30%), Positives = 294/625 (47%), Gaps = 101/625 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   R+P  I  +L    + HQ+ G++F++      + K        GCI+A  M
Sbjct: 67   LKKKVETGPRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDK-----NAHGCIMADGM 121

Query: 762  GLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRV 816
            GLGKT Q I+ ++T ++ S   G   ++  +I  P +++ NW  E +KW   + + P  V
Sbjct: 122  GLGKTLQCISLMWTLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAV 181

Query: 817  FMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHAL 870
                  S+      + +W    G      V ++ Y   R                   AL
Sbjct: 182  D--GKASKTELTSQIKQWAIASGRAVVRPVLIVSYETLR---------------MYVEAL 224

Query: 871  QDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
            +D P  +L+CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ +++F    
Sbjct: 225  KDSPIGLLLCDEGHRLKNKDSLTWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPD 284

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP 989
             LGS +EFR RF+ PI  G+    + ED K  ++    L   +  F+ R   +++ K LP
Sbjct: 285  LLGSQNEFRKRFELPILRGRDAAGSDEDKKKGDECLAELSTIVNKFIIRRTNDILTKYLP 344

Query: 990  PKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG 1046
             K   V+   LS  Q  LY  F+   ++      + S              L ++ NHP 
Sbjct: 345  VKYEHVVFCNLSQFQLDLYNHFIQSPEIRSLLRGKGSQP------LKAIGLLKKLCNHPD 398

Query: 1047 ILQLTKDKGYPSREDA--EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            +L L+ D   P  E A  ED    E                   +G++ D    K W   
Sbjct: 399  LLNLSTD--LPGCEFAFPEDYVPPEA------------------RGRDRD---IKSW--- 432

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    
Sbjct: 433  -----------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRGY 477

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    ++RQKLV++FN P  +     L+S++AG  G+NL  ANR++
Sbjct: 478  GSL--------RLDGTMNVNKRQKLVDKFNNPDGEEF-VFLLSSKAGGCGLNLIGANRLV 528

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  
Sbjct: 529  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSA 588

Query: 1283 QQVHRTISKEEMLHLFEFGDDENPD 1307
            + V R  S E +  LF+F  +   D
Sbjct: 589  EDVERHFSLESLRELFQFKPETRSD 613


>gi|124481796|gb|AAI33116.1| LOC553504 protein [Danio rerio]
          Length = 1105

 Score =  249 bits (636), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 188/617 (30%), Positives = 288/617 (46%), Gaps = 112/617 (18%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V++P +I+  L+ +Q  GI+F+++N  +S           GCIL   MGLGKT QVI FL
Sbjct: 48   VKVPYTINRYLRDYQREGIKFIYQNYAKS----------RGCILGDDMGLGKTVQVIGFL 97

Query: 774  YTAMRSVNLG--------------------LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
               ++                          +  +IV P++VL+NWK E   W       
Sbjct: 98   AAVLQKTGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDELDTW-----GH 152

Query: 814  LRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG 873
             RV ++  V +D   EL    R +  + L  Y   R L   +     N A          
Sbjct: 153  FRVVVVHGVRKDE--ELARVQRGRCEIALTTYETLR-LCLDQ-FNSINWA---------- 198

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
               ++ DEAH IKN ++  TQA+KQ++C+ RI LTG+ LQNNL E +C++++     LGS
Sbjct: 199  --AVIVDEAHKIKNHKSKITQAMKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRCLGS 256

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
               F+NRF +PIE GQ    T   +    +    L ++L  +  R   +++   LP K  
Sbjct: 257  LGAFKNRFSDPIEKGQKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKSLISDQLPKKDD 316

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEK----------------------IRKSF 1031
             V+   L+  QR +Y+  LD    T    S+ K                      +R  +
Sbjct: 317  RVVYCSLTDFQRTVYRAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKLNADGVPVRHLY 376

Query: 1032 FAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKP-RNMNDFLQG 1090
            F+    L ++ NH  +LQ            ++D +S +   Y   I E+  R   DF + 
Sbjct: 377  FSYLAILRKVANHVALLQ------------SKDGTSKKQEKYVTTICEQVFRKFPDFTER 424

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
                 F   +  +D +         YSGKM ++  +L       DK L+FS S   LD++
Sbjct: 425  CKQAAF---EAMSDPM---------YSGKMKVMQKLLNHFIAKKDKVLLFSLSTKLLDVL 472

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E Y               +G +++RLDG T+S +R K+V+ FN   ++ V   L+ST AG
Sbjct: 473  ESY------------CMAEGLEYHRLDGNTKSKDRVKIVKEFNS--SRDVNLCLVSTLAG 518

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
             LG+N   AN V++ D +WNP  DLQAI R +R GQ + V  +RL++ GT+EE IY RQV
Sbjct: 519  GLGLNFIGANVVVLFDPTWNPANDLQAIDRVYRIGQCRDVTVFRLISLGTVEEIIYLRQV 578

Query: 1271 TKEGLAARVVDRQQVHR 1287
             K+ L + V+ ++   R
Sbjct: 579  YKQQLQSSVIGQENARR 595


>gi|391867384|gb|EIT76630.1| DNA repair protein, SNF2 family [Aspergillus oryzae 3.042]
          Length = 811

 Score =  249 bits (636), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 302/650 (46%), Gaps = 111/650 (17%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMW 736
            LD  L   +  ++LG          +++K E   R+P  I  +L    + HQ+ G++F++
Sbjct: 181  LDAPLVHKSLADILG----------LKKKVETGPRVPVVIDPRLAKVLRPHQIEGVKFLY 230

Query: 737  ENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTP 792
                  + K        GCI+A  MGLGKT Q I+ ++T ++ S   G   ++  +I  P
Sbjct: 231  RCTTGMVDK-----NAHGCIMADGMGLGKTLQCISLMWTLLKQSPEAGKTLIQKCIIACP 285

Query: 793  VNVLHNWKQEFMKWRPSE-LKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGY 845
             +++ NW  E +KW   + + P  V      S+      + +W    G      V ++ Y
Sbjct: 286  SSLVGNWANELVKWLGKDAITPFAVD--GKASKTELTSQIKQWAIASGRAVVRPVLIVSY 343

Query: 846  TAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRR 904
               R                   AL+D P  +L+CDE H +KN  + T  AL  +  QRR
Sbjct: 344  ETLR---------------MYVEALKDSPIGLLLCDEGHRLKNKDSLTWTALNSLNVQRR 388

Query: 905  IALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQR 964
            + L+G+P+QN+L EY+ +++F     LGS +EFR RF+ PI  G+    + ED K  ++ 
Sbjct: 389  VILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAAGSDEDKKKGDEC 448

Query: 965  SHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDR 1021
               L   +  F+ R   +++ K LP K   V+   LS  Q  LY  F+   ++      +
Sbjct: 449  LAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHFIQSPEIRSLLRGK 508

Query: 1022 VSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA--EDSSSDENMDYNVVIGE 1079
             S              L ++ NHP +L L+ D   P  E A  ED    E          
Sbjct: 509  GSQP------LKAIGLLKKLCNHPDLLNLSTD--LPGCEFAFPEDYVPPEA--------- 551

Query: 1080 KPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSL 1138
                     +G++ D    K W              YSGKM++L  +L  +  +  DK +
Sbjct: 552  ---------RGRDRD---IKSW--------------YSGKMMVLDRMLARIRQDTNDKIV 585

Query: 1139 VFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNK 1198
            + S    TLDL E    KL R    G L        RLDG    ++RQKLV++FN P  +
Sbjct: 586  LISNYTQTLDLFE----KLCRSRGYGSL--------RLDGTMNVNKRQKLVDKFNNPDGE 633

Query: 1199 RVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAH 1258
                 L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A 
Sbjct: 634  EF-VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 692

Query: 1259 GTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            G++EEKI++RQ  K+ L++ VVD  + V R  S E +  LF+F  +   D
Sbjct: 693  GSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPETRSD 742


>gi|149045437|gb|EDL98437.1| similar to RAD54B homolog isoform 1; RAD54, S. cerevisiae, homolog
            of, B (predicted), isoform CRA_b [Rattus norvegicus]
          Length = 819

 Score =  249 bits (636), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 188/609 (30%), Positives = 301/609 (49%), Gaps = 91/609 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  G+ F++E ++  +R V       G ILA  MGLGKT Q I+ +
Sbjct: 197  VVIDPHLVRHLRPHQKDGVAFLYECVM-GMRAVGK----CGAILADEMGLGKTLQCISLI 251

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 252  WTLQCQGPYGGKPIVKRTLIVTPGSLVNNWRKEFQKWLGSER--IKIFT---VDQDHKVE 306

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
                  A   V +I Y           ++  +  + I   L      L+CDE H +KN+ 
Sbjct: 307  EFIN-SAFHSVLIISYEML--------LRSLDRIKTITFGL------LICDEGHRLKNSG 351

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              TT AL  + C++R+ LTG+P+QN+L E++ +VDFV  G LGS   +R  ++ PI   +
Sbjct: 352  IKTTAALSSLSCEKRVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRRIYEEPIVMSR 411

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
              +++ E+ ++  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY+
Sbjct: 412  EPSASKEERELGERRTTELTRLTGCFILRRTQEVINKYLPPKIENVVFCRPGALQIELYR 471

Query: 1010 RFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDKGYPSRED 1061
            + L        L G   +         +      AL ++ NHP +L    K K +     
Sbjct: 472  KLLSSQSVRFCLQGLLGN--------SAHLICIGALKKLCNHPRLLFSFVKGKEF----- 518

Query: 1062 AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 1121
              +SS DEN + ++  G     +  F  G N             L + +  E   SGK+ 
Sbjct: 519  --NSSRDENEERSLCQGL----LTVFPAGYN-------------LLQLSESE---SGKLQ 556

Query: 1122 LLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK-KGKDWYRLDG 1178
            +L+ +L   S +   +K ++ S    TL+L+E             ++ K  G    RLDG
Sbjct: 557  VLVKLLAAISELRPTEKVILVSNYRQTLNLLE-------------EVCKCHGYACARLDG 603

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
            +T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+
Sbjct: 604  QTPVSQRQQIVDNFNSKYSTDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAM 662

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLH 1296
             R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL+  VVD  R       S EE+ +
Sbjct: 663  ARVWRDGQKHPVHVYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEQIQFSVEELKN 722

Query: 1297 LFEFGDDEN 1305
            LF   ++ +
Sbjct: 723  LFTLHENSH 731


>gi|83767454|dbj|BAE57593.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 815

 Score =  249 bits (636), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 197/650 (30%), Positives = 302/650 (46%), Gaps = 111/650 (17%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMW 736
            LD  L   +  ++LG          +++K E   R+P  I  +L    + HQ+ G++F++
Sbjct: 185  LDAPLVHKSLADILG----------LKKKVETGPRVPVVIDPRLAKVLRPHQIEGVKFLY 234

Query: 737  ENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTP 792
                  + K        GCI+A  MGLGKT Q I+ ++T ++ S   G   ++  +I  P
Sbjct: 235  RCTTGMVDK-----NAHGCIMADGMGLGKTLQCISLMWTLLKQSPEAGKTLIQKCIIACP 289

Query: 793  VNVLHNWKQEFMKWRPSE-LKPLRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGY 845
             +++ NW  E +KW   + + P  V      S+      + +W    G      V ++ Y
Sbjct: 290  SSLVGNWANELVKWLGKDAITPFAVD--GKASKTELTSQIKQWAIASGRAVVRPVLIVSY 347

Query: 846  TAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRR 904
               R                   AL+D P  +L+CDE H +KN  + T  AL  +  QRR
Sbjct: 348  ETLR---------------MYVEALKDSPIGLLLCDEGHRLKNKDSLTWTALNSLNVQRR 392

Query: 905  IALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQR 964
            + L+G+P+QN+L EY+ +++F     LGS +EFR RF+ PI  G+    + ED K  ++ 
Sbjct: 393  VILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAAGSDEDKKKGDEC 452

Query: 965  SHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDR 1021
               L   +  F+ R   +++ K LP K   V+   LS  Q  LY  F+   ++      +
Sbjct: 453  LAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHFIQSPEIRSLLRGK 512

Query: 1022 VSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA--EDSSSDENMDYNVVIGE 1079
             S              L ++ NHP +L L+ D   P  E A  ED    E          
Sbjct: 513  GSQP------LKAIGLLKKLCNHPDLLNLSTD--LPGCEFAFPEDYVPPEA--------- 555

Query: 1080 KPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSL 1138
                     +G++ D    K W              YSGKM++L  +L  +  +  DK +
Sbjct: 556  ---------RGRDRD---IKSW--------------YSGKMMVLDRMLARIRQDTNDKIV 589

Query: 1139 VFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNK 1198
            + S    TLDL E    KL R    G L        RLDG    ++RQKLV++FN P  +
Sbjct: 590  LISNYTQTLDLFE----KLCRSRGYGSL--------RLDGTMNVNKRQKLVDKFNNPDGE 637

Query: 1199 RVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAH 1258
                 L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A 
Sbjct: 638  EF-VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 696

Query: 1259 GTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            G++EEKI++RQ  K+ L++ VVD  + V R  S E +  LF+F  +   D
Sbjct: 697  GSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPETRSD 746


>gi|326484392|gb|EGE08402.1| DNA repair and recombination protein RAD54 [Trichophyton equinum CBS
            127.97]
          Length = 820

 Score =  249 bits (636), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 188/625 (30%), Positives = 296/625 (47%), Gaps = 97/625 (15%)

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK 751
            E+LG      I   V E+ +  V I   ++  L+ HQ+ G++F++      + K      
Sbjct: 201  EILG------IKKNVDERPKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDK-----N 249

Query: 752  GLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR 807
              GCI+A  MGLGKT Q I  ++T ++ S   G   ++ A+I  P  ++ NW  E +KW 
Sbjct: 250  AHGCIMADGMGLGKTLQCITLMWTLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWL 309

Query: 808  PSELKPLRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDR 860
              +   +  F+++   S+      L +W    G      V ++ Y   R  S    ++D 
Sbjct: 310  GKDA--INPFVIDGKASKTELISQLRQWAIASGRSVVRPVLIVSYETLRMNS--DELRDT 365

Query: 861  NMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
             +             +L+CDE H +KN  + T  AL ++  Q+R+ L+G+P+QN+L EY+
Sbjct: 366  QIG------------LLLCDEGHRLKNADSQTYVALNKLNVQKRVILSGTPIQNDLSEYF 413

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
             ++DF   G LGS  EF   ++ PI  G+  + T E  K  N+R   L   +  F+ R  
Sbjct: 414  SLLDFANPGILGSRSEFHKTYEIPILRGRDADGTDEQQKKGNERLAELLNLVNKFIIRRS 473

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQA 1037
             +++ K LP K   V+   L+P Q  LY  F+   ++      + S              
Sbjct: 474  NDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQSPEIKSLLRGKGSQP------LKAIGI 527

Query: 1038 LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
            L ++ NHP +L+L++D         E    ++ M  N   G++                 
Sbjct: 528  LKKLCNHPDLLKLSED-----LPGCEQYFPEDMMVSNGRRGDRE---------------- 566

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSK 1156
             K W              YSGKM++L  +L  +  +  DK ++ S    TLDL E    +
Sbjct: 567  VKTW--------------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----R 608

Query: 1157 LPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
            L R    G +        RLDG     +R KLV++FN+P N      L+S++AG  GINL
Sbjct: 609  LCRARAYGCI--------RLDGTMGVKKRSKLVDKFNDP-NGEEFVFLLSSKAGGCGINL 659

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              ANR+++ D  WNP  D QA+ R WR GQ+K  F YR +A GT+EEKI++RQ  K+ L+
Sbjct: 660  VGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLS 719

Query: 1277 ARVVDR-QQVHRTISKEEMLHLFEF 1300
            + VVD  + V R  S + +  LF+F
Sbjct: 720  SCVVDSAEDVERHFSLDSLRELFQF 744


>gi|71662508|ref|XP_818260.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi strain
            CL Brener]
 gi|70883500|gb|EAN96409.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
            cruzi]
          Length = 1045

 Score =  249 bits (635), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 185/604 (30%), Positives = 299/604 (49%), Gaps = 87/604 (14%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK--GL-GCILAHTMGLGKTFQV 769
            +V +   I  KL+ HQ  G+RF+++ I        +G++  G  G ILA  MGLGKT Q 
Sbjct: 351  SVVVDPVIGDKLRPHQRAGVRFLFDCI--------TGERMPGYHGAILADEMGLGKTIQT 402

Query: 770  IAFLYTAMRSVNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
            +A +YT +R    G+ TA   L+VTP +++ NW  EF KW       ++ F + + S  +
Sbjct: 403  VATIYTCLRQGKHGVPTARKCLVVTPSSLVKNWCNEFDKWLGE--GAVKYFSISE-STPK 459

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
               +++++  +G V +I Y   R     K++   +  R +        +++VCDE H +K
Sbjct: 460  GDRIISRFDGEGDVLVISYDQLR-----KYIARISTLRSV--------ELVVCDEGHRLK 506

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            N    TT+A+  +  + RI L+G+P+QN+L E++ MV FV  G LGS   F   F+ P+ 
Sbjct: 507  NAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVM 566

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
             G+  +       + + R+H L    + F+ R   ++ +  LPPK    + V+L  LQ  
Sbjct: 567  QGRDPDCPEHLRSLGSDRAHYLSNLTQRFILRRTQSINESYLPPKVDVTVFVRLGELQSV 626

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS 1066
             Y++  DL          E           AL ++ NH  +            E   +SS
Sbjct: 627  AYEKLSDL---------VESSSCPPLVLISALRKLCNHMDLFY----------EAVLNSS 667

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
             +E  +   +    P+++              K + +  L E         GKM  +  +
Sbjct: 668  KEEVREGRGL----PKSV------------LPKGYKSGTLSEAA------GGKMHFVSLM 705

Query: 1127 LTMCSNMG--DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            L    N G  DK ++ S    TLD+I    + + R        +K   +++LDG      
Sbjct: 706  LDELRNNGDRDKLVIVSNFTQTLDVI----ANMCR--------QKRISFFQLDGSMPVKR 753

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            RQ++V+RFN P ++ +   L+S++AG +G+NL  ANR+I+ D  WNP  D QA+ R WR 
Sbjct: 754  RQEVVDRFNVPESQEI-VFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRD 812

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEFGDD 1303
            GQ K VF YRL++ G++EEKIY+RQV+K+GL+A VVD +    +  + EE+  LF +  D
Sbjct: 813  GQKKRVFIYRLLSAGSIEEKIYQRQVSKQGLSANVVDMKSDSKQHFTLEELRSLFCYRKD 872

Query: 1304 ENPD 1307
               D
Sbjct: 873  TRSD 876


>gi|395333479|gb|EJF65856.1| DNA repair protein, SNF2 family [Dichomitus squalens LYAD-421 SS1]
          Length = 813

 Score =  249 bits (635), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 186/606 (30%), Positives = 296/606 (48%), Gaps = 91/606 (15%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            I   +S  L+ HQV G++F++      +      +   GCI+A  MGLGKT Q IA ++T
Sbjct: 213  IDPRLSKVLRPHQVEGVKFLYRCTTGMVV-----ENQYGCIMADEMGLGKTLQCIALMWT 267

Query: 776  AMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELL 831
             ++ S + G  T    +I  P +++ NW  E +KW    L    +  L    +  + E+L
Sbjct: 268  LLKQSPHPGRCTIDKCIIACPSSLVKNWANELVKW----LGKDAIAALAIDGKGGKTEML 323

Query: 832  ---AKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
               A+W A  G      V ++ Y   R L+   H+ +  +             +L+CDE 
Sbjct: 324  EKVARWVAASGRNVTQPVMIVSYETLRTLT--AHLANCTIG------------LLLCDEG 369

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN+ + T QAL  +  +RR+ L+G+P+QN+L EY+ +++F    FLGS ++FR  F+
Sbjct: 370  HRLKNSESQTFQALNSLNVKRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFE 429

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
            N I  G+  ++T        ++   L   +  F+ R   +++ K LP K   V+  + S 
Sbjct: 430  NAIIRGRDADATDAVKAECEKKLKELGGIVAKFIIRRTNDLLSKYLPVKYEQVVFCRPSE 489

Query: 1003 LQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR 1059
            LQ  LY+ F+   ++      + S              L ++ NHP +L L  D     +
Sbjct: 490  LQLSLYRLFISSPEIQALLRGKDSQP------LKAINILKKLCNHPELLDLPGDLRGSEK 543

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
               ED S           G   R+     +G+           N ++H       ++SGK
Sbjct: 544  LLPEDYSG---------AGSSSRD-----KGR-----------NQIIH------CEWSGK 572

Query: 1120 MVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
             ++L   L  + +   DK ++ S    TLDL E    KL R  K G        ++RLDG
Sbjct: 573  FLVLERFLHRIHTETNDKIVLISNYTQTLDLFE----KLLRSKKYG--------YFRLDG 620

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
                ++RQKLV++FN+P  K     L+S++AG  GINL  ANR+I+ D  WNP  D QA+
Sbjct: 621  TMTINKRQKLVDQFNDPSGKEF-IFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQAL 679

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHL 1297
             R WR GQ K  F YR ++ GT+EEKI++RQ  K+ L++ VVD ++ V R  S + +  L
Sbjct: 680  ARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQSLSSAVVDEKEDVERHFSLDSLRKL 739

Query: 1298 FEFGDD 1303
            F F ++
Sbjct: 740  FLFNEN 745


>gi|432873723|ref|XP_004072358.1| PREDICTED: uncharacterized protein LOC101165812 [Oryzias latipes]
          Length = 1476

 Score =  249 bits (635), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 190/617 (30%), Positives = 286/617 (46%), Gaps = 112/617 (18%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            R+P +I+  L+ +Q  GI+F+++N I+S           GCIL   MGLGKT QVI FL 
Sbjct: 127  RVPFTINRYLRDYQREGIKFIYKNYIRSS----------GCILGDDMGLGKTVQVIGFLA 176

Query: 775  TAMRSVN----------LGLRTA------------LIVTPVNVLHNWKQEFMKWRPSELK 812
              +              L L++             L+V P++VL+NWK E   W      
Sbjct: 177  AVLHKTGTWEDVENNRPLFLQSQIPSKESNSNKVFLVVAPLSVLYNWKDELDTWG----- 231

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
                F    V   R+ E L   R   G   I  T +  L     +   NM          
Sbjct: 232  ---YFHCVVVHGLRKEEELT--RISNGRIEIALTTYETLRLC--LDQFNMINW------- 277

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                +  DEAH IKN  +  TQA+K ++C+ RI LTG+ LQNNL E +C++D+   G LG
Sbjct: 278  --SAVFVDEAHKIKNPNSQITQAMKGLRCKVRIGLTGTILQNNLEELWCVMDWAVPGCLG 335

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            +   F+N+F +P+E GQ  ++T   +    +    L +++  +  R    ++++ LP K 
Sbjct: 336  NLGHFKNKFSDPVEQGQRHSATKRALATGRKTVRALVKKISPWFLRRTKALIEEQLPKKD 395

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEK----------------------IRKS 1030
              V+   L+  Q+ +Y+  LD    T    S++K                      I++ 
Sbjct: 396  DRVVYCSLTDFQQAVYQAVLDTEDVTLLLRSSDKCECQSGRTRRSCCYKKNSEGAQIKEL 455

Query: 1031 FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQG 1090
            +F+    L ++ NH  +LQ T   G   +++   SS         +  +   N  DF+Q 
Sbjct: 456  YFSYLAILRKVANHAALLQFT--PGTSKKQEKYVSS---------ICAKVFPNFPDFVQR 504

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
              ++ F       + L + T     YSGKM +L  +L        K L+FS S   LD++
Sbjct: 505  CRNEAF-------EALSDPT-----YSGKMKVLQKLLKYYLQKRSKMLIFSLSTKLLDVL 552

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E Y               +G D+ RLDG T+S +R ++V+ FN   +  V   L+ST AG
Sbjct: 553  ESY------------CMAEGLDYSRLDGTTKSKDRVQIVKDFNS--SSHVNLCLVSTMAG 598

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
             LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE IY RQV
Sbjct: 599  GLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVTVLRLISLGTVEEIIYLRQV 658

Query: 1271 TKEGLAARVVDRQQVHR 1287
             K+ L   VV  Q   R
Sbjct: 659  YKQQLQCSVVGEQSARR 675


>gi|346977297|gb|EGY20749.1| DNA repair and recombination protein RAD26 [Verticillium dahliae
            VdLs.17]
          Length = 1116

 Score =  249 bits (635), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 187/627 (29%), Positives = 292/627 (46%), Gaps = 128/627 (20%)

Query: 701  YIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHT 760
            Y++N       + +R+P  I   L ++Q  G++++ E   Q++          G I+   
Sbjct: 336  YVIN-------DDLRLPGDIHPSLFSYQKTGVQWLAELYSQNV----------GGIVGDE 378

Query: 761  MGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML- 819
            MGLGKT Q IAF+     S  L  +  +IV P  VL  W  EF +W P+    LRV +L 
Sbjct: 379  MGLGKTVQAIAFIAALHYSKKL-TKPVIIVAPATVLRQWVNEFHRWWPA----LRVSILH 433

Query: 820  ----------EDVS--------RDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 861
                      ED +        RD+    +     K G  L+  T +  L        + 
Sbjct: 434  SSGSGMINLREDDTDEETHNGRRDKSVRKIVDRVVKHGHVLV--TTYNGL--------QT 483

Query: 862  MAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 921
               E+ H   D     V DE H I+N  A+ T   K+++   RI L+G+P+QNNL E + 
Sbjct: 484  YQDELLHVEWD---YAVLDEGHKIRNPNAEITVLCKELRTPNRIILSGTPVQNNLSELWS 540

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMD 980
            + DF+    LG+   FR +F+ PI+ G +  +T+  +    + +  L E +  ++ QR+ 
Sbjct: 541  LFDFIYPMRLGTLVTFRTQFEVPIKQGGYAGATNLQILTAEKCAETLKEAISQYLLQRLK 600

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQ 1040
            ++V   DLP KT  V+  K++  Q   YK+FL+     N  +S    RKS + G   L +
Sbjct: 601  IDVAA-DLPSKTERVLFCKMTDRQLEAYKQFLNSDA-VNQILSAR--RKSLY-GIDILRK 655

Query: 1041 IWNHPGIL--QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
            I NHP ++   L    GY                                          
Sbjct: 656  ICNHPDLIDPHLQNKAGY------------------------------------------ 673

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
             DW +           + SGKM+++ ++L +   +G K+L+FSQS   L++IE +L  L 
Sbjct: 674  -DWGDP----------EKSGKMLVVRNLLQIWKKLGHKTLLFSQSKMMLNVIEKFLGGL- 721

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
                      +   + R+DG T   +RQ L++RFN   +  +   L++TR G LG+NL  
Sbjct: 722  ----------ETVKYVRMDGETSIEKRQSLIDRFN--TDPEIDIFLLTTRTGGLGVNLTG 769

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANR+II D  WNP+ D+QA  RAWR GQT+ V  YRLM  GT+EEKIY RQ+ K+ +  +
Sbjct: 770  ANRIIIFDPDWNPSTDMQARERAWRLGQTRSVEIYRLMTAGTIEEKIYHRQIFKQFMTNK 829

Query: 1279 VVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            V+   +        ++  LF FG+ ++
Sbjct: 830  VLKDPKQRAAFDLSDLYDLFTFGNSQD 856


>gi|409045739|gb|EKM55219.1| hypothetical protein PHACADRAFT_173301 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 799

 Score =  249 bits (635), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 179/597 (29%), Positives = 294/597 (49%), Gaps = 78/597 (13%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ+ G++FM++     I      +   GCI+A  MGLGKT Q +  +
Sbjct: 204  VVIDPRLGKVLRPHQIEGVQFMFKATTGMI-----VEHQYGCIMADEMGLGKTLQCLTLM 258

Query: 774  YTAMR-SVNLGLRTA---LIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRA 828
            +T ++ S + G  TA   +I  P +++ NW  E +KW  P  +  + +   +++ + RR 
Sbjct: 259  WTLLKQSPHAGRSTAERVIIACPASLVKNWGNEIVKWLGPGVVGTVLLDGTDNLGKARRW 318

Query: 829  ELLAKWR-AKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
                + R     V +  Y   R L              IC  ++ G  +L+CDE H +KN
Sbjct: 319  IEQPRGRNCTNPVLITSYEYLRTLG--------ESYPSICE-MEIG--LLLCDEGHRLKN 367

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
            T + T Q L  +K +RR+ LTG+P+QN+L EY+ ++ F    +LG+ +EFR  F+N I  
Sbjct: 368  TESKTWQVLSTLKAKRRVILTGTPIQNDLTEYFSLLSFALPTYLGTRNEFRKNFENAIIR 427

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            G+  +++    +   Q+   L   +  F+ R   +++ K LP K   V+   +S +QR +
Sbjct: 428  GRDADASDAVREKSEQKLKDLAALVSKFIIRRTNDLLSKYLPVKYEHVVFCHMSDIQRDM 487

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            Y  F+D H  T   +  ++ +         L ++ NHP +L + K+  +   ++ +D+  
Sbjct: 488  YCHFVD-HPQTKTELRGKEAKP--LVAINILKKLVNHPELLPIGKETKHAEWDNKKDA-- 542

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
                       EK   M D                      HT    ++SGK ++L   L
Sbjct: 543  -----------EKEMEMRDV---------------------HT----EWSGKFLVLERFL 566

Query: 1128 -TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQ 1186
              M     DK ++ S    TLD+ E    KL R  + G        ++RLDG+    +RQ
Sbjct: 567  DKMRQETNDKIVLISNYTSTLDVFE----KLLRAKRYG--------YFRLDGKMNVKKRQ 614

Query: 1187 KLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
            ++V++FN P        L+S++AG  GINL  ANR+I+ D  WNP  D QA+ R WR GQ
Sbjct: 615  EVVDKFNNPEVPEF-VFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQALARVWRDGQ 673

Query: 1247 TKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEFGD 1302
             K  F YR +  GT+EEK+++RQ  K+ L++ VVD ++ V R  S++ +  LF++ D
Sbjct: 674  KKECFVYRFICTGTIEEKVFQRQAQKQSLSSAVVDEKEDVERFFSRDNLRQLFKYND 730


>gi|407035016|gb|EKE37494.1| DNA repair protein, putative [Entamoeba nuttalli P19]
          Length = 764

 Score =  249 bits (635), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 171/600 (28%), Positives = 295/600 (49%), Gaps = 81/600 (13%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            + +K E A+ I   I   L+ HQ+ G++FM+  I+      + G+   GCILA  MGLGK
Sbjct: 177  IDDKKEPAILIDPYIGKFLRPHQIEGVKFMYHCIM------RGGE--CGCILADEMGLGK 228

Query: 766  TFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
            T Q I  ++T  +  N+  +  +IV P +++ NW++EF KW   E  P++    +   ++
Sbjct: 229  TLQTITLIWTVYKQCNI--KKIVIVCPQSLIGNWEKEFKKWLGVERIPVQTGSSDSSMKE 286

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMI 885
            +  + +  +     V +I Y   R+     HV+     +           ++VCDE H I
Sbjct: 287  KVNDFIRDYIP---VLIISYEQVRS-----HVETLKKTK---------IGLIVCDEGHRI 329

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN  + T  +LK +   R I L+G+P+QN L ++Y +++F   G LG+   F+  F  PI
Sbjct: 330  KNLMSKTNSSLKALGGSRHIILSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPI 389

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
            +  Q  N++ E++++  +R+  L  +L  +V R    V +K LP KT  V+ +K S LQ 
Sbjct: 390  QKAQDGNASIEEIQLGTERAKELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQI 449

Query: 1006 RLYKRFL-DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAED 1064
            +LYK  L +L     D+ S  K         Q   ++ NHP ++       Y + E    
Sbjct: 450  KLYKIMLKELEKKKLDQCSALKY-------IQLFTKLCNHPSLIS-----KYLTEEKISL 497

Query: 1065 SSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLL 1124
            + +DE     + + E+  N                                ++  +  + 
Sbjct: 498  NENDEKCIKGISLNEESSN-------------------------------KFNITIQFIK 526

Query: 1125 DILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            +IL       +K ++ S    TLDL E Y  K     KQ K++    ++ RLDG+T   +
Sbjct: 527  EILIKSK---EKVVLVSNYTKTLDLFEIYF-KQEEENKQKKIF----NYLRLDGKTSQKQ 578

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            R  +VE+ N+  +      L+S++AG +G+NL   +R+I+ D  WNP  D QA+ R WR 
Sbjct: 579  RDIIVEKINDK-SSNYNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKDKQAMARIWRD 637

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLFEFGDD 1303
            GQ K    YR++  GT+EEKIY+RQ+ K  ++  +++   ++ +++S E+++ +FE   +
Sbjct: 638  GQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLEMGKSLSVEQLMKIFELNTN 697


>gi|255718981|ref|XP_002555771.1| KLTH0G17028p [Lachancea thermotolerans]
 gi|238937155|emb|CAR25334.1| KLTH0G17028p [Lachancea thermotolerans CBS 6340]
          Length = 1000

 Score =  249 bits (635), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 182/572 (31%), Positives = 268/572 (46%), Gaps = 86/572 (15%)

Query: 754  GCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWRP-S 809
            GCI+A  MGLGKT Q IA ++T +R    G  T    +IV P ++++NW  E +KW    
Sbjct: 433  GCIMADEMGLGKTLQCIALMWTLLRQGPQGKPTIDKCIIVCPSSLVNNWANEIVKWLGRG 492

Query: 810  ELKPLRV-FMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNM 862
             L  L +      +S    A+ +  W    G      V +I Y   R             
Sbjct: 493  TLASLPIDGKKSSLSNGTVAQAVRSWALAQGRSVVKPVLIISYETLR------------- 539

Query: 863  AREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
             R + H       +L+ DE H +KN  + T  +L  ++C RR+ L+G+P+QN+L EY+ +
Sbjct: 540  -RNVEHLRHCDVGLLLADEGHRLKNADSQTFTSLNSIRCPRRVILSGTPIQNDLSEYFAL 598

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
            ++F   G LGS  EFR  F+ PI  G+  ++  EDVK  ++R   L   +  F+ R   +
Sbjct: 599  LNFSNPGLLGSRLEFRKNFELPILRGRDADAMDEDVKKGDERLQALSTIVSKFIIRRTND 658

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALA 1039
            ++ K LP K   VI V L P QR LY+  L   D+     D    + ++         L 
Sbjct: 659  ILSKYLPCKYEHVIFVNLKPFQRSLYEHMLKSRDIKLLVKDAKHTQPLKH-----IGVLK 713

Query: 1040 QIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK 1099
            ++ NHP +L+L  D                                  ++G  D     +
Sbjct: 714  KLCNHPDLLRLPDD----------------------------------IEGSED--LMPE 737

Query: 1100 DWWNDLLHEHTYKELD--YSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSK 1156
            D+ +  + +    EL   +SGK  +L   L  + +   DK ++ S    TLDLIE     
Sbjct: 738  DYQSSTVSKRGRSELQTWHSGKFSILGRFLHKIKTESDDKIVIISNYTQTLDLIEKMCRS 797

Query: 1157 LPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
               P              RLDG    ++RQKLV+RFN+P  +     L+S++AG  GINL
Sbjct: 798  STYP------------VVRLDGTMTINKRQKLVDRFNDPEGQEF-IFLLSSKAGGCGINL 844

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              ANR+I++D  WNP  D QA+ R WR GQ K  F YR +  G++EEKIY+RQ  K  L+
Sbjct: 845  IGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFICTGSIEEKIYQRQSMKMSLS 904

Query: 1277 ARVVD-RQQVHRTISKEEMLHLFEFGDDENPD 1307
            + VVD ++ V R  S   +  LFE   D N D
Sbjct: 905  SCVVDEKEDVERLFSAGNLKQLFELRPDTNCD 936


>gi|156845511|ref|XP_001645646.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM
            70294]
 gi|156116312|gb|EDO17788.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM
            70294]
          Length = 941

 Score =  249 bits (635), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 187/574 (32%), Positives = 281/574 (48%), Gaps = 86/574 (14%)

Query: 742  SIRKVKSGDKG-LGCILAHTMGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLH 797
            S  ++K  +KG  GCI+A  MGLGKT Q IA ++T ++    G   +   +IV P ++++
Sbjct: 363  STIEIKITNKGAYGCIMADEMGLGKTLQCIALMWTLLKQGPQGKSLIDKCIIVCPSSLVN 422

Query: 798  NWKQEFMKWR-PSELKPLRV----FMLEDVSRDRRAELLAKW-RAKG-----GVFLIGYT 846
            NW  E +KW  P  L PL +      + +      A  +  W +AKG      V +I Y 
Sbjct: 423  NWANELIKWLGPGTLSPLAIDGKKSSITNGGNATVAHAIKSWAQAKGRNIVKPVLIISYE 482

Query: 847  AFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIA 906
              R              R +   +     +++ DE H +KN  + T  AL  + C RRI 
Sbjct: 483  TLR--------------RNVDQLVNCDVGLMLADEGHRLKNADSLTFTALDSINCPRRII 528

Query: 907  LTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSH 966
            L+G+P+QN+L EY+ +++F   G LGS  EFR  F+ PI  G+  ++T E +K    +  
Sbjct: 529  LSGTPIQNDLSEYFALLNFSNPGLLGSRSEFRRNFEIPILAGREADATDEALKKSTLQLQ 588

Query: 967  ILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEK 1026
             L E +  F+ R   +++ K LP K   VI V + P QR LYK +++L    +D  S EK
Sbjct: 589  KLSEVVSKFIIRRTNDILSKYLPCKYEHVIFVNMKPFQRDLYKSYIELR--KDD--SFEK 644

Query: 1027 IRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMND 1086
              K+       L ++ NHP +L L  +   P   D+        +  N            
Sbjct: 645  PLKAI----GVLKKLCNHPDLLDLESE--LPEMGDSVSIPDGYVISKN------------ 686

Query: 1087 FLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIP 1145
               GK+ D   Q                 +SGK  +L   L  + +   DK ++ S    
Sbjct: 687  ---GKSKDVQPQ-----------------FSGKFAILERFLHKINTESDDKIVLISNYTQ 726

Query: 1146 TLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
            TLDL+E    +L R  + G +        RLDG    ++RQKLV+RFN P +      L+
Sbjct: 727  TLDLVE----RLCRRKQYGSV--------RLDGSMTINKRQKLVDRFNSPDSHEF-IFLL 773

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            S++AG  GINL  ANR+I++D  WNP  D QA+ R WR GQ K  F YR +A GT+EEK+
Sbjct: 774  SSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFIATGTIEEKV 833

Query: 1266 YKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLF 1298
            Y+RQ  K  L++ VVD ++ V R  + +++  LF
Sbjct: 834  YQRQSMKMSLSSCVVDAKEDVDRLFTADDLKKLF 867


>gi|426197383|gb|EKV47310.1| hypothetical protein AGABI2DRAFT_204339 [Agaricus bisporus var.
            bisporus H97]
          Length = 966

 Score =  249 bits (635), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 165/567 (29%), Positives = 296/567 (52%), Gaps = 79/567 (13%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR- 778
            ++ +++ HQ  G++F++E ++       S  +G GCILA  MGLGKT Q IA ++T ++ 
Sbjct: 327  LTRRMRDHQREGVKFLYECVMG-----LSKHEGQGCILADEMGLGKTLQTIALVWTLLKQ 381

Query: 779  SVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
            +  LG    ++  +IV PV++++NW+ EF KW   +   +  +     S+D       K 
Sbjct: 382  NPYLGAGPVVKKVMIVCPVSLMNNWRSEFYKWLGRDRVGIATY-----SKDPIELHGFKN 436

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
             +   + +IGY   R+           M  +I        D+++CDE H +K+++  T Q
Sbjct: 437  SSAHPILIIGYERLRS-----------MVPQI--------DLIICDEGHRLKSSQTKTNQ 477

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
              K  K +RRI L+G+P+QN+L E++ M +F   G L +  +FR+ ++ PI   +  +++
Sbjct: 478  MFKDFKTRRRIILSGTPIQNDLSEFHAMTEFCNPGLLENYPKFRSFYEVPILKSRSPDAS 537

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
            +++++I   R+  L    K +V R D N++   LPPK  +V+ +  +PLQ +++++ L  
Sbjct: 538  TKEIEIGEARTSQLLVVAKSYVLRRDANLLNNYLPPKHEYVVFISPTPLQLQIFRKIL-- 595

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 1074
               T+DR  ++ I ++  A  +ALA I    GI     +     +  A ++   EN  + 
Sbjct: 596  ---TSDR-GDDIIEQNTTA--EALALI----GIFTKISNSPILLKAMAANAEGKENSIF- 644

Query: 1075 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMG 1134
                 + RN+ D  +        +              ++  SGK++ L +IL +     
Sbjct: 645  -----QKRNVADATKLVPVGAQIE--------------DMSLSGKLIALSNILKVVHETT 685

Query: 1135 -DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN 1193
             +K ++ S    TL+++E +              KK   ++RLDG+T  ++RQ  V  FN
Sbjct: 686  EEKCVLVSHYTSTLNILEAFCK------------KKQYSYFRLDGQTPQAQRQGYVNSFN 733

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
                +     L+S++AG +GINL  A+R+ +VD  WNP++D+Q++ R  R GQ +PVF Y
Sbjct: 734  RSNQRNGFIFLLSSKAGGVGINLIGASRLFLVDSDWNPSHDIQSMARCHRDGQKRPVFIY 793

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            RL+  G ++EKIY+RQ+TK  L+  ++
Sbjct: 794  RLLTAGAIDEKIYQRQLTKLALSDSLI 820


>gi|426360251|ref|XP_004047361.1| PREDICTED: DNA repair and recombination protein RAD54B [Gorilla
            gorilla gorilla]
          Length = 915

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 186/605 (30%), Positives = 299/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 291  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 345

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 346  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 400

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 401  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 444

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 445  AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 504

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   V+  +   LQ  LY
Sbjct: 505  REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELY 564

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 565  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 609

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  ++   P + N  L       F +K+                S
Sbjct: 610  KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 646

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + R
Sbjct: 647  GKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 694

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 695  LDGQTPISQRQQIVDGFNSQ-HSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 753

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE
Sbjct: 754  QAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEE 813

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 814  LKNLF 818


>gi|350583049|ref|XP_003355071.2| PREDICTED: DNA repair and recombination protein RAD54B-like [Sus
            scrofa]
          Length = 895

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 190/609 (31%), Positives = 304/609 (49%), Gaps = 91/609 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 272  VVIDPHLVYHLRPHQREGIIFLYECVM-GMRV----NGRCGAILADEMGLGKTLQCISLI 326

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V  D + E
Sbjct: 327  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIFT---VDPDHKVE 381

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 382  EFTK-SPLYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 425

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 426  AIKTTTALFSLPCEKRIILTGTPVQNDLQEFFSLIDFVNPGILGSLSCYRKIYEEPIITS 485

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY
Sbjct: 486  RQPSASQEEKELGERRACELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELY 545

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +         S      AL ++ NHP +L       + S ++
Sbjct: 546  RKLLNSQAVRFCLQGLMEN--------SSHLICIGALKKLCNHPCLL-------FSSVKE 590

Query: 1062 AEDSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKM 1120
             E SS+ DEN        E+ R   D L+       F  D+ N L+        + SGK+
Sbjct: 591  KECSSAWDEN--------EERRLYEDLLK------VFPPDY-NPLMFAE-----EESGKL 630

Query: 1121 VLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
             +L  +L +   +   +K ++ S    TL+++            Q    + G    RLDG
Sbjct: 631  QVLSKLLAVIHELRPAEKVVLVSNYTQTLNIL------------QEVCRRHGYGCTRLDG 678

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
            +T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+
Sbjct: 679  QTPISQRQQIVDGFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAM 737

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLH 1296
             R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+ L+  VVD  +   H   S EE+ +
Sbjct: 738  SRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTKTSDHIQFSVEELKN 797

Query: 1297 LFEFGDDEN 1305
            LF   ++ +
Sbjct: 798  LFTLHENSH 806


>gi|301788109|ref|XP_002929471.1| PREDICTED: DNA repair and recombination protein RAD54B-like
            [Ailuropoda melanoleuca]
          Length = 911

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 184/602 (30%), Positives = 298/602 (49%), Gaps = 91/602 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 287  VVIDPHLVYHLRPHQKEGIIFLYECVM-GMRV----NGRCGAILADEMGLGKTLQCISLI 341

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 342  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIF---PVDQDHKVE 396

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K+VK                D+L+CDE H +KN+
Sbjct: 397  EFTK-SPFYSVLIISYEMLLRSLDQVKNVKF---------------DLLICDEGHRLKNS 440

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G L S   +R  ++ PI   
Sbjct: 441  AIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILSSLSSYRKIYEEPIIIS 500

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY
Sbjct: 501  RQPSASEEEKELGEKRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELY 560

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDKGYPSRE 1060
            ++ L+       L G   +                AL ++ NHP +L    K+K Y S  
Sbjct: 561  RKLLNSQAVRFCLQGLLGN--------SPHLICIGALKKLCNHPCLLFNSIKEKEYSSTW 612

Query: 1061 DAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKM 1120
            D     ++E   Y  ++   P + N  +       F +++                SGK+
Sbjct: 613  DG----NEERSLYEGLVDVFPADYNPLM-------FMEEE----------------SGKL 645

Query: 1121 VLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
             +L+ +L +   +   +K ++ S    TL+++            Q    + G  + RLDG
Sbjct: 646  QVLMKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYTYTRLDG 693

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
            +T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+
Sbjct: 694  QTPISQRQQIVDGFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAM 752

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLH 1296
             R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+ L+  VVD  +   H   S EE+ +
Sbjct: 753  SRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTKTSEHIQFSVEELKN 812

Query: 1297 LF 1298
            LF
Sbjct: 813  LF 814


>gi|340931904|gb|EGS19437.1| DNA repair and recombination protein RAD54-like protein [Chaetomium
            thermophilum var. thermophilum DSM 1495]
          Length = 838

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 186/621 (29%), Positives = 293/621 (47%), Gaps = 85/621 (13%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++   E  R+P  I  KL    + HQ+ G++FM+  +   I       K  GCI+
Sbjct: 223  ILGIKKQPVNERPRVPVVIDPKLAKVLRPHQIEGVKFMYRCVTGMI-----DPKANGCIM 277

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q I  L+T ++ S   G  T   A++  P +++ NW  E +KW   +   
Sbjct: 278  ADEMGLGKTLQCITLLWTLLKQSPEAGKPTIEKAIVACPSSLVRNWANELVKWLGKDA-- 335

Query: 814  LRVFMLE-DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
            +  F ++   S++     L +W    G         R+++    +      R    AL+ 
Sbjct: 336  INPFTIDGKASKEELTRQLHQWAIASG---------RSVTRPVIIVSYETLRLNVEALKG 386

Query: 873  GP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             P  +++CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F     L
Sbjct: 387  TPIGLMLCDEGHRLKNGDSQTFNALNSLNVSRRVILSGTPIQNDLSEYFSLISFANPDLL 446

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS  EFR RF+ PI  G+  +++  + K  ++    L   +  F+ R   +++ K LP K
Sbjct: 447  GSRAEFRKRFELPILRGRDADASEAERKRGDECLAELLSIVNKFIIRRTNDLLSKYLPVK 506

Query: 992  TVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
               V+   L+P Q  LY  F+   D+      + S              L ++ NHP +L
Sbjct: 507  YEHVVFCNLAPFQADLYNYFITSPDIQALLRGKGSQP------LKAIGILKKLCNHPDLL 560

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
             L  D     +   ED    +                   +G++ D    K W       
Sbjct: 561  DLPGDLPGCEQYFPEDFVPKDA------------------RGRDRD---VKSW------- 592

Query: 1109 HTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
                   YSGKM++L  +L  + +   DK ++ S    TLDL E    +L R        
Sbjct: 593  -------YSGKMIVLDRMLARIRAETNDKIVLISNYTQTLDLFE----RLCR-------- 633

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
             +G    RLDG    ++RQ+LV++FN+P N      L+S++AG  G+NL  ANR+++ D 
Sbjct: 634  SRGYGCLRLDGTMNVNKRQRLVDKFNDP-NGDEFVFLLSSKAGGCGLNLIGANRLVLFDP 692

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVH 1286
             WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L+  VVD  + V 
Sbjct: 693  DWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSYCVVDSAEDVE 752

Query: 1287 RTISKEEMLHLFEFGDDENPD 1307
            R  S + +  LF++  D   D
Sbjct: 753  RHFSLDALRELFQYRPDTRSD 773


>gi|452981665|gb|EME81425.1| hypothetical protein MYCFIDRAFT_155601 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 810

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 183/621 (29%), Positives = 299/621 (48%), Gaps = 95/621 (15%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    V  E+ +  V I   ++ KL+ HQV G++F+++     I          GCI+
Sbjct: 192  ILGIKKKVDTERPKVPVVIDPRLAQKLRPHQVEGVKFLYKCTTGLI-----DSNAEGCIM 246

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q I  ++T ++ S + G   ++  ++  P +++ NW  E +KW  P  + 
Sbjct: 247  ADEMGLGKTLQCITLMWTLLKQSPDAGKSTIQKCIVACPSSLVRNWANELVKWLGPDAIT 306

Query: 813  PLRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMARE 865
            P   F  +   S++   + +  W +  G      V ++ Y   R                
Sbjct: 307  P---FACDGKASKEELTQQMRSWASATGRAVVRPVLIVSYETLR---------------L 348

Query: 866  ICHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                L++ P  +++CDE H +KN  + T +AL  +  ++R+ L+G+P+QN+L EY+ ++D
Sbjct: 349  YVDELRNAPIGLMLCDEGHRLKNAESQTFEALTGLNVKKRVILSGTPIQNDLSEYFALLD 408

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F   G+LG+  EFR +++ PI  G+  + T  D +  ++R   L   +  F+ R   +++
Sbjct: 409  FANPGYLGTRQEFRKQYEIPILRGRDADGTDADRQKGDERLKELLILVNKFIIRRTNDIL 468

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
             K LP K   V+   L+P Q  LY  F+   ++      + S              L ++
Sbjct: 469  SKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQSLLRGKGSQP------LKAIGLLKKL 522

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NHP +L L  D              +E+   + V    P++     +G++ D    K W
Sbjct: 523  CNHPDLLNLPDDL----------PGCEEHFPADFV----PKDA----RGRDRD---VKPW 561

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                          YSGKM +L  +L  +  +  DK ++ S    TLD+ E    KL R 
Sbjct: 562  --------------YSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDVFE----KLCRN 603

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
               G L        RLDG    ++RQKLV++FN+P        L+S++AG  G+NL  AN
Sbjct: 604  RSYGCL--------RLDGTMNVNKRQKLVDKFNDPEGDEF-VFLLSSKAGGCGLNLIGAN 654

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VV
Sbjct: 655  RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVV 714

Query: 1281 DR-QQVHRTISKEEMLHLFEF 1300
            D  + V R  S + +  LF++
Sbjct: 715  DSAEDVERHFSLDSLRELFQY 735


>gi|407860358|gb|EKG07368.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
            cruzi]
          Length = 1044

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 185/600 (30%), Positives = 297/600 (49%), Gaps = 93/600 (15%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK--GL-GCILAHTMGLGKTFQVIAFLYTA 776
            I  KL+ HQ  G++F+++ I        +G++  G  G ILA  MGLGKT Q +A +YT 
Sbjct: 358  IGDKLRPHQRAGVQFLFDCI--------TGERMPGYHGAILADEMGLGKTIQTVATIYTC 409

Query: 777  MRSVNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK 833
            +R    G+ TA   L+VTP +++ NW  EF KW       ++ F + + S  +   ++++
Sbjct: 410  LRQGKHGVPTARKCLVVTPSSLVKNWCNEFDKWLGE--GAVKYFSISE-STPKGDRIISR 466

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
            +  +G V +I Y   R     K++   +  R +        +++VCDE H +KN    TT
Sbjct: 467  FDGEGDVLVISYDQLR-----KYITRISTLRSV--------ELVVCDEGHRLKNAEVKTT 513

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            +A+  +  + RI L+G+P+QN+L E++ MV FV  G LGS   F   F+ P+  G+  + 
Sbjct: 514  KAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDC 573

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
                  + + R+H L    + F+ R   ++ +  LPPK    + V+L  LQ   Y++  D
Sbjct: 574  PEHLRSLGSDRAHYLSNLTQRFILRRTQSINESYLPPKVDVTVFVRLGELQSVAYEKLSD 633

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
            L          E           AL ++ NH  +            E   +SS +E    
Sbjct: 634  L---------VESSSCPPLVLISALRKLCNHMDLFY----------EAVLNSSKEE---- 670

Query: 1074 NVVIGEK---PRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 1130
               +GE    P+++              K + +  L E         GKM  +  +L   
Sbjct: 671  ---VGEGRGIPKSV------------LPKGYKSGTLSEAA------GGKMHFVSLMLDEL 709

Query: 1131 SNMG--DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
             N G  DK ++ S    TLD+I    + + R        +K   +++LDG      RQ++
Sbjct: 710  RNNGDRDKLVIVSNFTQTLDVI----ANMCR--------QKRISFFQLDGSMPVKRRQEV 757

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            V+RFN P ++ +   L+S++AG +G+NL  ANR+I+ D  WNP  D QA+ R WR GQ K
Sbjct: 758  VDRFNVPESQEI-VFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKK 816

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEFGDDENPD 1307
             VF YRL++ G++EEKIY+RQV+K+GL+A VVD +    +  + EE+  LF +  D   D
Sbjct: 817  RVFIYRLLSAGSIEEKIYQRQVSKQGLSANVVDMKSDSKQHFTLEELRSLFCYRKDTRSD 876


>gi|327532753|ref|NP_001192192.1| DNA repair and recombination protein RAD54B isoform 3 [Homo sapiens]
 gi|119612118|gb|EAW91712.1| hCG2009220, isoform CRA_b [Homo sapiens]
          Length = 726

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 186/605 (30%), Positives = 299/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 102  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 156

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 157  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSE--RIKIF---TVDQDHKVE 211

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 212  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 255

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 256  AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 315

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   V+  +   LQ  LY
Sbjct: 316  REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELY 375

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 376  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 420

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  ++   P + N  L       F +K+                S
Sbjct: 421  KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 457

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + R
Sbjct: 458  GKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 505

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 506  LDGQTPISQRQQIVDGFNSQ-HSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 564

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE
Sbjct: 565  QAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEE 624

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 625  LKNLF 629


>gi|402080120|gb|EJT75265.1| DNA repair protein rhp54 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 810

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 196/649 (30%), Positives = 310/649 (47%), Gaps = 108/649 (16%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGE-EAVRIPSSISAKL----KAHQVVGIRFM 735
            +D  L   +  E+LG          +R+K E E  R+P  I  +L    + HQ+ G++FM
Sbjct: 183  MDAPLVHKSLAEILG----------IRKKVEGEHPRVPVVIDPRLTKVLRPHQIEGVKFM 232

Query: 736  WENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVT 791
            +  +   I      +K  GCI+A  MGLGKT Q I  L+T ++ S   G   ++ A++  
Sbjct: 233  YRCVTGMI-----DEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKSTIQKAIVAC 287

Query: 792  PVNVLHNWKQEFMKWRPSE-LKPLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYT 846
            P +++ NW  E +KW  ++ + P  +      E+++R  R   ++  RA    V ++ Y 
Sbjct: 288  PSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAISSGRAVTRPVIIVSYE 347

Query: 847  AFR-NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRI 905
              R N+   KH              Q G  +++CDE H +KN  + T  AL  +   RR+
Sbjct: 348  TLRLNVEELKHT-------------QIG--LMLCDEGHRLKNGDSQTFTALNNLNVTRRV 392

Query: 906  ALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRS 965
             L+G+P+QN+L EY+ ++ F     LG+  EFR RF+  I  G+  ++T  +    ++R 
Sbjct: 393  ILSGTPIQNDLSEYFSLISFANPALLGTRLEFRKRFEIAILRGRDADATESERAKGDERL 452

Query: 966  HILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRV 1022
              L   +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   ++      + 
Sbjct: 453  KELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNLFIRSPEIQALLRGKG 512

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED--AEDSSSDENMDYNVVIGEK 1080
            S              L ++ NHP +L L++D   P  E+   ED    ++          
Sbjct: 513  SQP------LKAINILKKLCNHPDLLNLSED--LPGCENWFPEDYVPKDS---------- 554

Query: 1081 PRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLV 1139
                    +G++ D    K W              YSGKM +L  +L  + ++  DK ++
Sbjct: 555  --------RGRDRD---IKPW--------------YSGKMQVLDRMLARIRADTNDKIVL 589

Query: 1140 FSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKR 1199
             S    TLD+ E    KL R    G L        RLDG    ++RQKLV+RFN+P    
Sbjct: 590  ISNYTSTLDIFE----KLCRSRGYGNL--------RLDGTMNVTKRQKLVDRFNDPEGTE 637

Query: 1200 VKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHG 1259
                L+S++AG  GINL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +  G
Sbjct: 638  F-VFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTG 696

Query: 1260 TMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
            ++EEKI++RQ  K+ L++ VVD  + V R  S + +  LF++  D   D
Sbjct: 697  SIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLKELFQYRGDTRSD 745


>gi|281347253|gb|EFB22837.1| hypothetical protein PANDA_019651 [Ailuropoda melanoleuca]
          Length = 810

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 184/602 (30%), Positives = 298/602 (49%), Gaps = 91/602 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 186  VVIDPHLVYHLRPHQKEGIIFLYECVM-GMRV----NGRCGAILADEMGLGKTLQCISLI 240

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 241  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIF---PVDQDHKVE 295

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K+VK                D+L+CDE H +KN+
Sbjct: 296  EFTK-SPFYSVLIISYEMLLRSLDQVKNVKF---------------DLLICDEGHRLKNS 339

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G L S   +R  ++ PI   
Sbjct: 340  AIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILSSLSSYRKIYEEPIIIS 399

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY
Sbjct: 400  RQPSASEEEKELGEKRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELY 459

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL-QLTKDKGYPSRE 1060
            ++ L+       L G   +                AL ++ NHP +L    K+K Y S  
Sbjct: 460  RKLLNSQAVRFCLQGLLGN--------SPHLICIGALKKLCNHPCLLFNSIKEKEYSSTW 511

Query: 1061 DAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKM 1120
            D     ++E   Y  ++   P + N  +       F +++                SGK+
Sbjct: 512  DG----NEERSLYEGLVDVFPADYNPLM-------FMEEE----------------SGKL 544

Query: 1121 VLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
             +L+ +L +   +   +K ++ S    TL+++            Q    + G  + RLDG
Sbjct: 545  QVLMKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYTYTRLDG 592

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
            +T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+
Sbjct: 593  QTPISQRQQIVDGFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAM 651

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLH 1296
             R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+ L+  VVD  +   H   S EE+ +
Sbjct: 652  SRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTKTSEHIQFSVEELKN 711

Query: 1297 LF 1298
            LF
Sbjct: 712  LF 713


>gi|189230031|ref|NP_001121509.1| RAD54 homolog B [Xenopus (Silurana) tropicalis]
 gi|183986491|gb|AAI66345.1| rad54b protein [Xenopus (Silurana) tropicalis]
          Length = 897

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 193/658 (29%), Positives = 316/658 (48%), Gaps = 103/658 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   ++  L+ HQ  GI F++E ++  +R     ++  G ILA  MGLGKT Q I+ +
Sbjct: 271  VVVDPYLAVHLRPHQKEGILFLYECVM-GMRV----NERFGAILADEMGLGKTLQCISLI 325

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T +R    G    ++ ALIVTP +++ NW++EF KW  +E   +RVF    V +D + E
Sbjct: 326  WTLIRQGPYGGKPVIKKALIVTPGSLVKNWRKEFQKWLGTER--IRVFA---VDQDHKVE 380

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
               K      V +I Y     L   + ++  +             D+++CDE H +KNT 
Sbjct: 381  EFMK-SPLYSVLIISYEML--LRCLEQIQSLDF------------DVVICDEGHRLKNTS 425

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              TT AL  + C +RI L+G+P+QN+L E++ +++FV    LGS   +R  F+ PI   +
Sbjct: 426  IKTTSALASLTCSKRIILSGTPVQNDLQEFFALIEFVNPAALGSLSTYRKIFEEPIIRSR 485

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
               +T+E+  +  +R+  L      F+ R    V+ K LPPK   ++  + S  Q  LY+
Sbjct: 486  EPTATTEEKNLGEERAAELARLTGLFILRRTQEVINKFLPPKIESIVFCRPSQFQLDLYR 545

Query: 1010 RFLDLHGFTNDRVSNEKIRKSFFAG----------YQALAQIWNHPGILQLTKDKGYPSR 1059
            + L           N +  KS   G            AL ++ NHP +L  T  +G  + 
Sbjct: 546  KLL-----------NSRTVKSCLLGSGESSPHLVCIGALKKLCNHPFLLFRTI-QGKSTN 593

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
             D      DE+  Y  V                    F +D+    + E        SGK
Sbjct: 594  PD-----QDEHNLYESVA-----------------EVFPQDYDGAKISE------SESGK 625

Query: 1120 MVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            +++L ++L+    +   ++ ++ S    TL+++            Q    + G    RLD
Sbjct: 626  LLVLSNLLSRIRELSPSERVVLVSNYTQTLNIL------------QDLCNQHGYSCTRLD 673

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G+T  ++RQ +V+ FN   +      L+S++AG +G+NL  A+ +I+ D  WNP  D+QA
Sbjct: 674  GQTPVTQRQHIVDGFNSKYSTDF-IFLLSSKAGGVGLNLIGASHLILYDLDWNPANDIQA 732

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEML 1295
            + R WR GQ   V  YRL+  G++EEKIY+RQ++K+GL+  VVD  ++  H   S +E+ 
Sbjct: 733  MARVWRDGQRHTVHIYRLLTTGSLEEKIYQRQISKQGLSGAVVDLTKKSEHIRFSLDELR 792

Query: 1296 HLFEFGDDENPDPLTAVSKENGQGSSQNTNCAL--KHKLPLSHEGCSDKLMESLLGKH 1351
            +LF   +D +      V+ +  Q     TNC      + PL H  C   L +  L K+
Sbjct: 793  NLFTLHEDTD-----CVTHDLLQCDCTITNCHSDGSPQKPLIHRSCQLGLHQDQLNKN 845


>gi|390597886|gb|EIN07285.1| SNF2 family domain-containing protein [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 846

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 198/624 (31%), Positives = 302/624 (48%), Gaps = 90/624 (14%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAHTMGLGKTFQV 769
            AV I   ++  L+ HQV G++F++        +  SG   +   GCI+A  MGLGKT Q 
Sbjct: 212  AVVIDPRLTKVLRPHQVEGVKFLF--------RCTSGMVVENQYGCIMADEMGLGKTLQC 263

Query: 770  IAFLYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
            IA L+T ++ S + G  T    +I  P +++ NW  E +KW    L    +  L    + 
Sbjct: 264  IALLWTLVKQSPHAGKPTIEKCIIACPSSLVKNWANELVKW----LGKDAISALAVDGKG 319

Query: 826  RRAELL---AKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREICHALQ---------D 872
             + ELL   A+W A  G         RN++    V K  NM++ +  + +         +
Sbjct: 320  SKGELLERVARWTAASG---------RNVTQPDRVTKSPNMSKVMIVSYETLRTLTVYLN 370

Query: 873  GPDI--LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
            G  I  L+CDE H +KN  + T QAL  +  +RR+ LTG+P+QN+L EY+ ++DF    +
Sbjct: 371  GCKIGLLLCDEGHRLKNAESQTYQALTGLDVKRRVILTGTPIQNDLTEYFSLLDFANPNY 430

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 990
            LG+ +EFR  F+N I  G+  ++T +  +   ++   L   +  F+ R   +++ K LP 
Sbjct: 431  LGTRNEFRKNFENIIIRGRDADATDKAKEDCEKKLKELSGLVTKFIIRRTNDLLSKYLPV 490

Query: 991  KTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGI 1047
            K   V+  K SPLQ  LY+ F+   ++      + S              L ++ NHP +
Sbjct: 491  KYEQVVFCKPSPLQLSLYRLFIASPEIKALLRGKESQP------LKAINVLKKLCNHPEL 544

Query: 1048 LQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
            L L K        D   S S    D+   +GE               G  Q      ++H
Sbjct: 545  LDLPK--------DLHGSGSLIPDDF-CGMGESATRSGGSSSRSRGGGGAQ------IVH 589

Query: 1108 EHTYKELDYSGKMVLLLDILTMCSNMG-------DKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                   ++SGK V+L   L    N G       DK ++ S    TLDL E  L      
Sbjct: 590  P------EWSGKFVVLDRFLAQI-NAGNADKENKDKIVLISNYTQTLDLFERLLR----- 637

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
             + G  +     +YRLDG     +RQKLV+ FN P +K     L+S++AG  GINL  AN
Sbjct: 638  ARNG--YSNRYHYYRLDGTMTIPKRQKLVDDFNNPTSKEF-IFLLSSKAGGCGINLIGAN 694

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+I+ D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ +K+ L++ VV
Sbjct: 695  RLILFDPDWNPAADQQALARVWRDGQKKACFVYRFISTGTIEEKIFQRQASKQALSSAVV 754

Query: 1281 D-RQQVHRTISKEEMLHLFEFGDD 1303
            D ++   R  S  ++  LF F ++
Sbjct: 755  DEKEDAERHFSLSQLRELFLFNEN 778


>gi|225684006|gb|EEH22290.1| DNA repair and recombination protein RAD54 [Paracoccidioides
            brasiliensis Pb03]
          Length = 821

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 193/643 (30%), Positives = 301/643 (46%), Gaps = 111/643 (17%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMW 736
            LD  L   +  ++LG          +++K E   RIP  I  +L    + HQV G++F++
Sbjct: 191  LDAPLVHKSLADILG----------IKKKVETRPRIPVVIDPRLAKVLRPHQVEGVKFLY 240

Query: 737  ENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTP 792
                  I       K  GCI+A  MGLGKT Q I  L+T ++      +T +    I  P
Sbjct: 241  RCTTGMI-----DPKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKTTIQKCVIACP 295

Query: 793  VNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL---LAKWRAKGG------VFLI 843
              ++ NW  E +KW   +   +  F+++   +  +AEL   L +W    G      V ++
Sbjct: 296  STLVKNWANELVKWLGKDA--VTPFVVD--GKATKAELTSQLRQWAISSGRAVVRPVLIV 351

Query: 844  GYTAFR-NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 902
             Y   R N+     +KD  +             +L+CDE H +KN  + T  AL  +   
Sbjct: 352  SYETLRLNVD---EIKDTQIG------------LLLCDEGHRLKNGDSQTFTALNSLNVD 396

Query: 903  RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMN 962
            RR+ L+G+P+QN+L EY+ +++F     LG+  EF  +F+ PI  G+  + T ED K  +
Sbjct: 397  RRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPILRGRDADGTDEDRKKGD 456

Query: 963  QRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTN 1019
            +    L   +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   D+     
Sbjct: 457  ETVAELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNYFIQSPDIKSLLR 516

Query: 1020 DRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGE 1079
             + S              L ++ NHP +L L  D     +   +D    E+         
Sbjct: 517  GKGSQP------LKAIGILKKLCNHPDLLNLGADLPGCEQFFPDDYIPIES--------- 561

Query: 1080 KPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSL 1138
                     +G++ D    + W              YSGKM++L  +L  +  +  DK +
Sbjct: 562  ---------RGRDRD---VRSW--------------YSGKMMVLDRMLARIRQDTNDKIV 595

Query: 1139 VFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNK 1198
            + S    TLDL E    +L R  + G L        RLDG    ++RQKLV++FN+P  +
Sbjct: 596  LISNYTQTLDLFE----RLCRSRQYGCL--------RLDGSMNVTKRQKLVDKFNDPEGE 643

Query: 1199 RVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAH 1258
                 L+S++AG  GINL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A 
Sbjct: 644  EF-VFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 702

Query: 1259 GTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEF 1300
            GT+EEKI++RQ  K+ L++ VVD  + V R  S + +  LF+F
Sbjct: 703  GTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQF 745


>gi|345793211|ref|XP_850491.2| PREDICTED: DNA repair and recombination protein RAD54B isoform 8
            [Canis lupus familiaris]
          Length = 744

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 184/605 (30%), Positives = 297/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 119  VVIDPHLVYHLRPHQKEGIMFLYECVM-GMRV----NGRCGAILADEMGLGKTLQCISLI 173

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 174  WTLQCQGPYGGKPVVKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIF---PVDQDHKVE 228

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               +      V +I Y    R+L   K+VK                 +L+CDE H +KN+
Sbjct: 229  EFTR-SPFYSVLIISYEMLLRSLDQIKNVKF---------------GLLICDEGHRLKNS 272

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++R+ LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 273  AIKTTAALISLSCEKRVILTGTPVQNDLQEFFALIDFVNPGILGSLSFYRKVYEEPIIIS 332

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ K+  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY
Sbjct: 333  RQPSASEEEKKLGEKRAVELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELY 392

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 393  RKLLNSQAVRFCLQGLLGN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 437

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  ++   P + N  +  + +                       S
Sbjct: 438  KECSSTWDGKEEKSLYEALLDVFPADYNPLMFSEEE-----------------------S 474

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +LL +L +   +   +K ++ S    TLD++            Q    + G  + R
Sbjct: 475  GKLQVLLKLLAVIHELRPTEKVVLVSNYTQTLDIL------------QEVCKRHGYTYTR 522

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 523  LDGQTPVSQRQQIVDSFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 581

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+ L+  VVD  R   H   S EE
Sbjct: 582  QAMSRVWRDGQKNPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTRTSEHIQFSVEE 641

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 642  LKNLF 646


>gi|344272964|ref|XP_003408298.1| PREDICTED: DNA repair and recombination protein RAD54B [Loxodonta
            africana]
          Length = 883

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 185/602 (30%), Positives = 298/602 (49%), Gaps = 91/602 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  G+ F++E ++  +R     D   G ILA  MGLGKT Q I+ +
Sbjct: 259  VVIDPHLVCHLRPHQKGGVIFLYECVM-GMRV----DGRCGAILADEMGLGKTLQCISLI 313

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 314  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIFT---VDQDHKVE 368

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               +      V +I Y    R+L   K+++                D+L+CDE H +KN+
Sbjct: 369  EFIR-SPLYSVLIISYEMLLRSLDQIKNIRF---------------DLLICDEGHRLKNS 412

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 413  AIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKVYEEPIIIS 472

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+  +  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY
Sbjct: 473  REPSASEEEKNLGVRRAAELTRLTGLFILRRTQEVINKYLPPKIENVVFCQPGALQIELY 532

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 533  RKLLNSKAVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FRSIKE 577

Query: 1062 AEDSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKM 1120
             E S + DEN + ++  G     +N F    N   F +K+                SGK+
Sbjct: 578  KECSPTCDENEERSLYEGL----INVFPDDYNPLMFTEKE----------------SGKL 617

Query: 1121 VLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
             +L  +L +   +   +K ++ S    TLD++            Q    + G    RLDG
Sbjct: 618  QVLSKLLEVIHELRPSEKVVLVSNYTKTLDIL------------QEVCKRHGYAHTRLDG 665

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
            +T  S+RQ +V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+
Sbjct: 666  QTPISQRQHIVDGFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAM 724

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLH 1296
             R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL+  V+D  +   H   S EE+ +
Sbjct: 725  SRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVMDLTKTSEHIQFSVEELKN 784

Query: 1297 LF 1298
            LF
Sbjct: 785  LF 786


>gi|426235834|ref|XP_004011884.1| PREDICTED: DNA repair and recombination protein RAD54B [Ovis aries]
          Length = 909

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 185/601 (30%), Positives = 298/601 (49%), Gaps = 89/601 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPHLVYYLRPHQKEGIIFLYECVM-GMRV----NGRCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW   E   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGRPVVKKTLIVTPGSLVNNWRKEFQKWLGIER--IKIFT---VDQDHKIE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K +K                D+L+CDE H +KN+
Sbjct: 396  EFTK-SPFYSVLIISYEMLLRSLDQIKSIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
                T AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  TIKATTALISLSCEKRIILTGTPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIIS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  QR+  L      F+ R    V+ + LPPK   V+  +   LQ  LY
Sbjct: 500  RQPSASEEERELGEQRAAELTCLTGLFILRRTQEVINQYLPPKIENVVFCRPGALQIALY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +         S      AL ++ NHP +L  +       +E 
Sbjct: 560  RKLLNSQAVRFCLQGLLEN--------TSHLICIGALKKLCNHPCLLFGS------VKEK 605

Query: 1062 AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 1121
              +S+ DE+ + ++  G     +N F    N   F +++                SGK+ 
Sbjct: 606  ESNSTWDESEERSLYEGL----INVFPADYNPTMFTEEE----------------SGKLQ 645

Query: 1122 LLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
            +L  +L +   +   +K ++ S    TLD++            Q    + G  + RLDG+
Sbjct: 646  VLSKLLAVIRELRPAEKVVLVSNYTRTLDIL------------QEVCKRHGYAYTRLDGQ 693

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
            T  S+RQK+V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+ 
Sbjct: 694  TPISQRQKIVDGFNSKYSPDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMS 752

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHL 1297
            R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL+  VVD  +   H   S EE+ +L
Sbjct: 753  RVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLSKTSDHIQFSVEELKNL 812

Query: 1298 F 1298
            F
Sbjct: 813  F 813


>gi|403160793|ref|XP_003321236.2| hypothetical protein PGTG_02278 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375170399|gb|EFP76817.2| hypothetical protein PGTG_02278 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1065

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 182/618 (29%), Positives = 292/618 (47%), Gaps = 117/618 (18%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +  SI+  L+ HQV G++FM+E  +  +R+V     G GCILA  MGLGK+ Q I+ L
Sbjct: 401  VVVDPSIARSLRPHQVDGLKFMYECTM-GLREVG----GHGCILADEMGLGKSIQAISLL 455

Query: 774  YTAMRSVNLG-----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 828
            +T +R   +      ++ A+IV PV ++ NWK+E  KW       L VF  +     ++ 
Sbjct: 456  WTLLRQNPISGQGPVIKRAMIVCPVTLVKNWKREIHKWLGRSR--LNVFTADGKCDFKQF 513

Query: 829  ELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
                 +     V +IGY   R LS           +E+ +++     +++ DE H +++ 
Sbjct: 514  TCSLYY----NVLVIGYEKLRTLS-----------KEV-NSIYPPIGLIIADEGHRLRSI 557

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
             A TTQAL+ +K +RR+ L+G+P+QNNL EYY MVDFV  G L     F+ +F+ PI   
Sbjct: 558  EAKTTQALRSLKTKRRVVLSGTPIQNNLTEYYAMVDFVNPGILDDYRTFKKKFEQPILKS 617

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +              R+  L +  + +V R    V+++ LPP+  + + +  + +QR +Y
Sbjct: 618  REPCCNPVQRSEGEARAEELAKMSRHYVLRRGSEVIQEHLPPRHDYCVFISPTTVQRNIY 677

Query: 1009 KRFLDLHGFTNDRVSNEKIRKSFFAG--------YQALAQIWNHPGILQLTKDKGYPSRE 1060
            +  LD         S E   ++ F+G           L  + N PG+L            
Sbjct: 678  EAVLD---------SPET--RAIFSGDISQHLVLMNTLKLLCNSPGLL------------ 714

Query: 1061 DAEDSSSDENMDYNVVIGEKPRNMNDF---LQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                                   MN++     G+     F    W       T +++  S
Sbjct: 715  -----------------------MNEYSIKSLGQISSTLFPA--WV------TREDVQLS 743

Query: 1118 GKMVLL---LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
            GK++ L   LDIL   +N  +K ++ S    TLD++E +      P            + 
Sbjct: 744  GKLIALAKFLDILKKKNN--EKIILVSNFTKTLDIVESHCKASHYP------------FC 789

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG+T  ++R  +V+ FN          L+S+++G +G+NL  A+R+I+ DG WNP  D
Sbjct: 790  RLDGKTAQNQRDNIVQVFNRSSASAQFIFLLSSKSGGVGLNLIGASRLILFDGDWNPATD 849

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV-------HR 1287
            LQA+ R WR GQ KP   YR +  GT++E I++RQVTK GLA  ++   +          
Sbjct: 850  LQAMARIWRQGQQKPCHIYRFLTTGTIDECIFQRQVTKIGLATDLMSAPKAGEETAGGGN 909

Query: 1288 TISKEEMLHLFEFGDDEN 1305
            T +K E+  +FE   D +
Sbjct: 910  TFTKNELKRVFELHSDTD 927


>gi|452988763|gb|EME88518.1| hypothetical protein MYCFIDRAFT_46188 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 1208

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 185/619 (29%), Positives = 286/619 (46%), Gaps = 120/619 (19%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E   RIP  I   L  +Q  G++++WE   Q +          G I+   MGLGKT Q+I
Sbjct: 391  EGGFRIPGDIYPSLFDYQKTGVQWLWELYSQQV----------GGIIGDEMGLGKTIQII 440

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVS 823
            +FL     S  +  +  ++V P  V+  W  EF +W P    PLRV +L        DV 
Sbjct: 441  SFLAGLHYSGKI-QKPIIVVCPATVMKQWVNEFHRWWP----PLRVSILHTSGSGMLDVG 495

Query: 824  RDRRAE--LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR---------NMAREICHALQD 872
            R+ R E  L A+           Y++ + LS G+    R         ++       LQ 
Sbjct: 496  RENRYEEALEAE----------DYSSKKTLSKGQKAAKRILDTVTKQGHVLVTTYSGLQT 545

Query: 873  GPDIL--------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
              ++L        V DE H I+N     T   K++    R+ L+G+P+QNNL E + + D
Sbjct: 546  YAELLIPTDWEYAVLDEGHKIRNPNTAITIYCKELCTHNRVILSGTPMQNNLTELWSLFD 605

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNV 983
            FV    LG+   F+N+F+ PI++G + N+++  V+   + +  L + +  ++ QR  ++V
Sbjct: 606  FVFPMRLGTLVNFKNQFEIPIKHGGYANASNLQVETAMKCAETLKDAISPYLLQRFKVDV 665

Query: 984  VKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
               DLP K+  V+  KL+ LQR  Y+ FLD    + D  S    ++    G   L +I N
Sbjct: 666  AA-DLPKKSERVLFCKLTKLQREAYQWFLD----SEDMKSIMNGKRQALYGVDILRKICN 720

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP ++              E  +  +  +YN   G K                       
Sbjct: 721  HPDLV--------------EHRTLSKKSEYNYGDGRK----------------------- 743

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                         SGKM ++  +L      G K+L+F+Q    LD++E ++  +      
Sbjct: 744  -------------SGKMQVVKSLLQEWKRDGHKTLLFAQHRIMLDILERFIGNM------ 784

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
                  G  + R+DG T   ERQ LV+ FN   +  +   L++T+ G LG+NL  ANRVI
Sbjct: 785  -----AGFSYRRMDGTTPIKERQNLVDEFNN--DPDLHVFLLTTKVGGLGVNLTGANRVI 837

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            I D  WNP+ D+QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   
Sbjct: 838  IYDPDWNPSTDVQARERAWRLGQKREVLIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDP 897

Query: 1284 QVHRTISKEEMLHLFEFGD 1302
            +  +T   +++  LF  GD
Sbjct: 898  KQRQTFQLKDLHDLFTLGD 916


>gi|380493077|emb|CCF34140.1| DNA repair protein rhp54 [Colletotrichum higginsianum]
          Length = 806

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 190/625 (30%), Positives = 299/625 (47%), Gaps = 93/625 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++   E  R+P  I  +L    + HQV G++FM+  +   I      +K  GCI+
Sbjct: 191  ILGIKKKVEGEHPRVPVVIDPRLAKVLRPHQVEGVKFMYRCVTGMIE-----EKANGCIM 245

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LK 812
            A  MGLGKT Q I  L+T ++ S   G   ++ A++  P +++ NW  E +KW  ++ + 
Sbjct: 246  ADEMGLGKTLQCITLLWTLLKQSPEAGKGTIQKAIVACPSSLVRNWANELVKWLGADAIT 305

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      E+++R  R   +A  R+    V ++ Y   R N+   KH K         
Sbjct: 306  PFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKI-------- 357

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
                    +++CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F  
Sbjct: 358  -------GLMLCDEGHRLKNGDSQTFSALNNLNVTRRVILSGTPIQNDLSEYFSLISFAN 410

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LG+  +FR RF+ PI  G+  ++   + K  ++    L   +  F+ R   +++ K 
Sbjct: 411  PDLLGTRLDFRKRFELPILRGRDADAAEAERKKGDECLSELLGIVNKFIIRRTNDILSKY 470

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   L+P Q  LY  F+   ++      + S              L ++ NH
Sbjct: 471  LPVKYEHVVFCNLAPFQLDLYNYFITSPEIQALLRGKGSQP------LKAINILKKLCNH 524

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L +  D   P  ED          DY       P+      +G++ D    K W   
Sbjct: 525  PDLLNIADD--LPGSEDCYPD------DY------VPKEA----RGRDRD---VKPW--- 560

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM +L  +L  +  +  DK ++ S    TLDL E    KL R    
Sbjct: 561  -----------YSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRAY 605

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
            G L        RLDG    ++RQKLV++FN P  +     L+S++AG  G+NL  ANR++
Sbjct: 606  GCL--------RLDGTMNVNKRQKLVDKFNNPDGEEF-VFLLSSKAGGCGLNLIGANRLV 656

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  
Sbjct: 657  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSA 716

Query: 1283 QQVHRTISKEEMLHLFEFGDDENPD 1307
            + V R  S + +  LF++    N D
Sbjct: 717  EDVERHFSLDSLRELFQYRPGTNSD 741


>gi|226293396|gb|EEH48816.1| DNA repair and recombination protein RAD54 [Paracoccidioides
            brasiliensis Pb18]
          Length = 863

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 193/643 (30%), Positives = 301/643 (46%), Gaps = 111/643 (17%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMW 736
            LD  L   +  ++LG          +++K E   RIP  I  +L    + HQV G++F++
Sbjct: 233  LDAPLVHKSLADILG----------IKKKVETRPRIPVVIDPRLAKVLRPHQVEGVKFLY 282

Query: 737  ENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTP 792
                  I       K  GCI+A  MGLGKT Q I  L+T ++      +T +    I  P
Sbjct: 283  RCTTGMI-----DPKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKTTIQKCVIACP 337

Query: 793  VNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL---LAKWRAKGG------VFLI 843
              ++ NW  E +KW   +   +  F+++   +  +AEL   L +W    G      V ++
Sbjct: 338  STLVKNWANELVKWLGKDA--VTPFVVD--GKATKAELTSQLRQWAISSGRAVVRPVLIV 393

Query: 844  GYTAFR-NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 902
             Y   R N+     +KD  +             +L+CDE H +KN  + T  AL  +   
Sbjct: 394  SYETLRLNVD---EIKDTQIG------------LLLCDEGHRLKNGDSQTFTALNSLNVD 438

Query: 903  RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMN 962
            RR+ L+G+P+QN+L EY+ +++F     LG+  EF  +F+ PI  G+  + T ED K  +
Sbjct: 439  RRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPILRGRDADGTDEDRKKGD 498

Query: 963  QRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTN 1019
            +    L   +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   D+     
Sbjct: 499  ETVAELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNYFIQSPDIKSLLR 558

Query: 1020 DRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGE 1079
             + S              L ++ NHP +L L  D     +   +D    E+         
Sbjct: 559  GKGSQP------LKAIGILKKLCNHPDLLNLGADLPGCEQFFPDDYIPIES--------- 603

Query: 1080 KPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSL 1138
                     +G++ D    + W              YSGKM++L  +L  +  +  DK +
Sbjct: 604  ---------RGRDRD---VRSW--------------YSGKMMVLDRMLARIRQDTNDKIV 637

Query: 1139 VFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNK 1198
            + S    TLDL E    +L R  + G L        RLDG    ++RQKLV++FN+P  +
Sbjct: 638  LISNYTQTLDLFE----RLCRSRQYGCL--------RLDGSMNVTKRQKLVDKFNDPEGE 685

Query: 1199 RVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAH 1258
                 L+S++AG  GINL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A 
Sbjct: 686  EF-VFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 744

Query: 1259 GTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEF 1300
            GT+EEKI++RQ  K+ L++ VVD  + V R  S + +  LF+F
Sbjct: 745  GTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQF 787


>gi|19075591|ref|NP_588091.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe 972h-]
 gi|74698399|sp|Q9UR24.1|RHP26_SCHPO RecName: Full=DNA repair protein rhp26; AltName: Full=RAD26 homolog
 gi|5902438|dbj|BAA84456.1| Rhp26 [Schizosaccharomyces pombe]
 gi|6562902|emb|CAB62827.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe]
          Length = 973

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 185/627 (29%), Positives = 287/627 (45%), Gaps = 123/627 (19%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E    IP  I   L  +QV  ++++WE   Q            G I+   MGLGKT Q++
Sbjct: 264  EGGFTIPGDIRPHLFRYQVTCVQWLWELYCQEA----------GGIIGDEMGLGKTIQIV 313

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA-- 828
            +FL +   S     + ALIV P  ++  W  EF  W      PLRV +L      +RA  
Sbjct: 314  SFLSSLHHSGKFQ-KPALIVCPATLMKQWVNEFHTW----WAPLRVVVLHATGSGQRASR 368

Query: 829  ---------------ELLAKWRAKGG--------------VFLIGYTAFRNLSFGKHVKD 859
                           E     + +G               VF  G+      +  +   D
Sbjct: 369  EKRQYESDASESEAEESKTSIKLRGASSSFHRYAKNLVESVFTRGHILITTYAGLRIYGD 428

Query: 860  RNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 919
              + RE  +         V DE H I+N  ++ + + KQ++   RI L+G+P+QNNL E 
Sbjct: 429  LILPREWGYC--------VLDEGHKIRNPDSEISISCKQIRTVNRIILSGTPIQNNLTEL 480

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QR 978
            + + DFV  G LG+   F+N+F  PI  G + N+++  V+   + + +L + +  ++ +R
Sbjct: 481  WNLFDFVFPGRLGTLPVFQNQFALPINIGGYANASNVQVQTAYKCACMLRDLISPYLLRR 540

Query: 979  MDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL 1038
            M ++V   DLP K+  V+  KL+PLQR+ Y+ FL   G    ++ N K  +    G   L
Sbjct: 541  MKLDVAA-DLPKKSEQVLFCKLTPLQRKAYQDFL--QGSDMQKILNGK--RQMLYGIDIL 595

Query: 1039 AQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
             +I NHP ++         +RE                          +L  K D     
Sbjct: 596  RKICNHPDLV---------TRE--------------------------YLLHKED----- 615

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
                      + Y + + SGK+ ++  +LT+    G ++L+FSQ+   LD++E  L  LP
Sbjct: 616  ----------YNYGDPEKSGKLKVIRALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLP 665

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
                          + R+DG T  + RQ LV+ FN+  N+     L++TR G LG+NL  
Sbjct: 666  -----------DVHYCRMDGSTSIALRQDLVDNFNK--NEYFDVFLLTTRVGGLGVNLTG 712

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            A+RVI+ D  WNP+ D QA  RAWR GQ K V  YRLM  GT+EEKIY RQ+ K+ L  +
Sbjct: 713  ADRVILFDPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTNK 772

Query: 1279 VVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            ++   +  R     ++  LF  GD++ 
Sbjct: 773  ILKDPKQRRFFKMTDLHDLFTLGDNKT 799


>gi|328772759|gb|EGF82797.1| hypothetical protein BATDEDRAFT_9561, partial [Batrachochytrium
            dendrobatidis JAM81]
          Length = 912

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 184/628 (29%), Positives = 282/628 (44%), Gaps = 126/628 (20%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            +P  +   L  +Q   ++++WE   Q +          G ++   MGLGKT Q+I+FL  
Sbjct: 237  VPGDVYRHLFPYQRTCVKWLWELYCQEV----------GGLVGDEMGLGKTIQIISFL-A 285

Query: 776  AMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS---------RDR 826
             +    L     +IV P  VL  W QEF KW P    P RV +L             RD 
Sbjct: 286  GLGFSRLLKGPVIIVCPATVLRQWVQEFHKWWP----PFRVAILHSTGSGLGSEAHDRDS 341

Query: 827  RAELLAKWRAKGGVFL----IGYTAFRNLSFGKHVKDRNMAREICH-------------- 868
             +  ++    +   FL          R+ +    +K ++ AR +                
Sbjct: 342  ESTYMSDESEENEYFLDKKRPKKKGKRSDTLHYPIKSKSKARALVANIVKNGHVLVTTYA 401

Query: 869  ALQDGPDIL--------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
            A++   DIL        V DE H I+N  ++ T A K+ K   RI L+G+P+QNNL+E +
Sbjct: 402  AIRIHADILLPVKWAYCVLDEGHKIRNPDSEVTMACKRFKTPHRIILSGTPIQNNLIELW 461

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
             + DFV  G LG+   F+ +F  PI  G + N+ +  V+   + + IL + +  ++ R  
Sbjct: 462  SIYDFVFPGRLGTLPVFQTQFATPINLGGYANANNVQVQTAYKCACILRDMISPYLLRRM 521

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQA 1037
             + V  DLP K+  V+  +LS  QRR Y++FL   +L G    ++          AG   
Sbjct: 522  KSDVATDLPKKSEQVLFCRLSDAQRREYEKFLSSKELKGILEGKLR-------ILAGIDV 574

Query: 1038 LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
            L +I NHP +L+                                RN  DF          
Sbjct: 575  LRKICNHPDLLE--------------------------------RNNADF---------- 592

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
                         Y  +  SGKM+++  +L M    G + L+F Q+   LD++E ++   
Sbjct: 593  ----------SANYGAVSRSGKMIVVKALLQMWKRQGHRVLLFCQTRQMLDILELFIKN- 641

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
                       +G  + R+DG T   +R K+V+ +NE  ++     L++T+ G LGINL 
Sbjct: 642  -----------EGYAYLRMDGSTSIQQRSKIVDCYNE--DESYFVFLLTTKVGGLGINLT 688

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
            SANRVII D  WNP+ D+QA  RAWR GQ K V  YRLM  GT+EEKIY RQ+ K+ L  
Sbjct: 689  SANRVIIFDPDWNPSTDMQARERAWRLGQKKSVTIYRLMTSGTIEEKIYHRQIFKQFLTN 748

Query: 1278 RVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            +++   +  R     ++  LF  G  E+
Sbjct: 749  KILKDPRQRRFFKSNDLHDLFMLGSKED 776


>gi|407425454|gb|EKF39433.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
            cruzi marinkellei]
          Length = 1049

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 184/606 (30%), Positives = 297/606 (49%), Gaps = 91/606 (15%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLG---CILAHTMGLGKTFQV 769
            +V +   I  KL+ HQ  G+RF+++ I        +G++  G    ILA  MGLGKT Q 
Sbjct: 351  SVVVDPVIGDKLRPHQRAGVRFLFDCI--------TGERMPGYHGAILADEMGLGKTIQT 402

Query: 770  IAFLYTAMRSVNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
            +A +YT +R    G+ TA   L+VTP +++ NW  EF KW       ++ F + + S  +
Sbjct: 403  VATIYTCLRQGKHGVPTARKCLVVTPSSLVKNWCNEFDKWLGE--GAVKYFSISE-STPK 459

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
               +++++  +G V +I Y   R     K++   +  + +        +++VCDE H +K
Sbjct: 460  GDRIISRFDGEGDVLVISYDQLR-----KYITRISTLKSV--------ELVVCDEGHRLK 506

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            N    TT+A+  +  + RI L+G+P+QN+L E++ MV FV  G LGS   F   F+ P+ 
Sbjct: 507  NAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVM 566

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
             G+  +       + + R+H L    + F+ R   ++ +  LPPK    + V+L  LQ  
Sbjct: 567  QGRDPDCPEHLRSLGSDRAHYLSNLTQRFILRRTQSINESYLPPKVDVTVFVRLGELQSV 626

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS 1066
             Y++   L       +    +  S      AL ++ NH  +            E   +SS
Sbjct: 627  AYEK---LSALVESSLCPPLVLIS------ALRKLCNHMDLFY----------EAVLNSS 667

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
             +E  +   +    P+ +              K + +  L E         GKM  +  +
Sbjct: 668  KEEVREGRGI----PKTV------------LPKGYKSGTLSEAA------GGKMHFVSLM 705

Query: 1127 LTMCSNMG--DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            L    N G  DK ++ S    TLD+I                 +K   +++LDG      
Sbjct: 706  LDELRNNGDRDKLVIVSNFTQTLDVI------------AAMCRQKRISFFQLDGSMPVKR 753

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            RQ++V+RFN P ++ +   L+S++AG +G+NL  ANR+I+ D  WNP  D QA+ R WR 
Sbjct: 754  RQEVVDRFNVPESQEI-VFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRD 812

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ---QVHRTISKEEMLHLFEFG 1301
            GQ K VF YRL++ G++EEKIY+RQV+K+GL+A VVD Q   + H T+  EE+  LF + 
Sbjct: 813  GQKKRVFIYRLLSAGSIEEKIYQRQVSKQGLSANVVDMQSDSKQHFTL--EELRSLFCYR 870

Query: 1302 DDENPD 1307
             D   D
Sbjct: 871  KDTRSD 876


>gi|409080483|gb|EKM80843.1| hypothetical protein AGABI1DRAFT_71424 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 967

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 165/567 (29%), Positives = 295/567 (52%), Gaps = 79/567 (13%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR- 778
            ++ +++ HQ  G++F++E ++       S  +G GCILA  MGLGKT Q IA ++T ++ 
Sbjct: 325  LTRRMRDHQREGVKFLYECVMG-----LSKHEGQGCILADEMGLGKTLQTIALVWTLLKQ 379

Query: 779  SVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
            +  LG    ++  +IV PV++++NW+ EF KW   +   +  +     S+D       K 
Sbjct: 380  NPYLGAGPVVKKVMIVCPVSLMNNWRSEFYKWLGRDRVGIATY-----SKDPIELHGFKN 434

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
             +   + +IGY   R+           M  +I        D+++CDE H +K+++  T Q
Sbjct: 435  SSTHPILIIGYERLRS-----------MVPQI--------DLIICDEGHRLKSSQTKTNQ 475

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
              K  K +RRI L+G+P+QN+L E++ M +F   G L    +FR+ ++ PI   +  +++
Sbjct: 476  MFKDFKTRRRIILSGTPIQNDLSEFHAMTEFCNPGLLDDYPKFRSFYEVPILKSRSPDAS 535

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
            +++++I   R+  L    K +V R D N++   LPPK  +V+ +  +PLQ +++++ L  
Sbjct: 536  TKEIEIGEARTSQLLVVAKSYVLRRDANLLNNYLPPKHEYVVFISPTPLQLQIFRKIL-- 593

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 1074
               T+DR  ++ I ++  A  +ALA I    GI     +     +  A ++   EN  + 
Sbjct: 594  ---TSDR-EDDIIEQNTTA--EALALI----GIFTKISNSPILLKAMAANAEGKENSIF- 642

Query: 1075 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMG 1134
                 + RN+ D  +        +              ++  SGK++ L +IL +     
Sbjct: 643  -----QKRNVADATKLVPVGAQIE--------------DMSLSGKLIALSNILKVVHETT 683

Query: 1135 -DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN 1193
             +K ++ S    TL+++E +              KK   ++RLDG+T  ++RQ  V  FN
Sbjct: 684  EEKCVLVSHYTSTLNILEAFCR------------KKQYSYFRLDGQTPQAQRQGYVNSFN 731

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
                +     L+S++AG +GINL  A+R+ +VD  WNP++D+Q++ R  R GQ +PVF Y
Sbjct: 732  RSNQRNGFIFLLSSKAGGVGINLIGASRLFLVDSDWNPSHDIQSMARCHRDGQKRPVFIY 791

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            RL+  G ++EKIY+RQ+TK  L+  ++
Sbjct: 792  RLLTAGAIDEKIYQRQMTKLALSDSLI 818


>gi|426362392|ref|XP_004048351.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Gorilla gorilla gorilla]
          Length = 701

 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 189/634 (29%), Positives = 285/634 (44%), Gaps = 120/634 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G RF++ + I           G GCIL   MGLGKT QVI+FL  
Sbjct: 115  IPYTINRYLRDYQREGTRFLYGHYIH----------GGGCILGDDMGLGKTVQVISFLAA 164

Query: 776  AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                  RS+      +   +  LIV P++VL+NWK E   W     
Sbjct: 165  VLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW----- 219

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  + L  Y   R            +  +  ++L+
Sbjct: 220  GYFRVTVLHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 265

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 266  WSA--VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 323

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS   FR +F +P+E+GQ   +T  ++    +    L E++ G+  R    ++K  LP K
Sbjct: 324  GSGTYFRKQFSDPVEHGQRHTATKRELATGRKAMQRLAEKMSGWFLRRTKTLIKDQLPKK 383

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 384  EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKT 443

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
             + +    L ++ NH  +LQ            A  +S  ++     +  +      DF+Q
Sbjct: 444  LYLSYLTVLQKVANHVALLQ------------AASTSKQQDTLIKRICDQVFSRFPDFVQ 491

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD+
Sbjct: 492  KSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 539

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            ++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST A
Sbjct: 540  LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTMA 585

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQ
Sbjct: 586  GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 645

Query: 1270 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            + K+ L   VV  +   R       SKE    LF
Sbjct: 646  IYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 679


>gi|395818192|ref|XP_003782520.1| PREDICTED: DNA repair and recombination protein RAD54B [Otolemur
            garnettii]
          Length = 910

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 184/596 (30%), Positives = 300/596 (50%), Gaps = 80/596 (13%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  G+ F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 287  VVIDPYLVCHLRPHQKEGVVFLYECVM-GMRM----NGRYGAILADEMGLGKTLQCISLI 341

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NW++EF KW  SE   +++F    V +D + E
Sbjct: 342  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIFT---VDQDHKVE 396

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 397  EFIKVTFYS-VLIISYEMLLRSLDQVKNIKF---------------DLLICDEGHRLKNS 440

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI L+G+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 441  AIKTTTALISLSCEKRIILSGTPVQNDLQEFFALIDFVNPGILGSLSSYRRIYEEPIILS 500

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ ED  +  +R+  L      F+ R    V+ K LPPK   V+    + LQ  +Y
Sbjct: 501  REPSASEEDKNLGERRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCWPTALQIEIY 560

Query: 1009 KRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            ++ L+       R   + +  S       AL ++ NHP +L       + S ++ E SS+
Sbjct: 561  RKLLNSQAV---RFCLQGLENSPHLICIGALKKLCNHPCLL-------FSSIKEKECSST 610

Query: 1068 -DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
             DEN +  +  G     +N F    N   F + +                SGK+ +LL +
Sbjct: 611  CDENEERRLYEGL----LNVFPADYNPLQFTEME----------------SGKLQVLLKL 650

Query: 1127 LTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            L +  ++   +K ++ S    TL+++            Q    + G  + RLDG+T   +
Sbjct: 651  LAVIHDLRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYTYTRLDGQTPIVQ 698

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            RQ +V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+ R WR 
Sbjct: 699  RQHIVDGFNSKHSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRD 757

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLF 1298
            GQ  PV  YRL+  GT+EEKIY+RQ++K+GL+  V+D  +   H   S EE+ +LF
Sbjct: 758  GQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVIDLTKTSEHIQFSVEELKNLF 813


>gi|261203723|ref|XP_002629075.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081]
 gi|239586860|gb|EEQ69503.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081]
          Length = 828

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 188/620 (30%), Positives = 296/620 (47%), Gaps = 105/620 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K +   R+P  I  +L    + HQV G++F++      I       K  GCI+A  M
Sbjct: 213  IKKKVDARPRVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMI-----DPKANGCIMADEM 267

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTPVNVLHNWKQEFMKWR-PSELKPLRV 816
            GLGKT Q I  L+T ++      +T +    I  P  ++ NW  E +KW     + P   
Sbjct: 268  GLGKTLQCITLLWTLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGEGAVSP--- 324

Query: 817  FMLEDVSRDRRAELLAK---WRAKGG------VFLIGYTAFR-NLSFGKHVKDRNMAREI 866
            F+++   +  +AEL+++   W    G      V ++ Y   R N+               
Sbjct: 325  FVID--GKASKAELISQLRQWAVSSGRAVVRPVLIVSYETLRLNVD-------------- 368

Query: 867  CHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
               L+D P  +L+CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ +++F
Sbjct: 369  --ELKDTPIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNF 426

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
                 LG+  EF  +++ PI  G+  ++T ED K  ++    L   +  F+ R   +++ 
Sbjct: 427  ANPNILGTRSEFHKKYEMPILRGRDADATDEDRKKGDESVTELLNVVNKFIIRRTNDILS 486

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            K LP K   V+   L+P Q  LY  F+   D+      + S              L ++ 
Sbjct: 487  KYLPVKYEHVVFCGLAPFQTDLYNHFIQSPDIKSLLRGKGSQP------LKAIGLLKKLC 540

Query: 1043 NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
            NHP +L L  D             S++    + V  E         +G++ D    + W 
Sbjct: 541  NHPDLLNLGTDL----------PGSEQFFPDDYVPME--------CRGRDRD---VRSW- 578

Query: 1103 NDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG 1161
                         YSGKM++L  +L  +  +  DK ++ S    TLDL E    +L R  
Sbjct: 579  -------------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----RLCRTR 621

Query: 1162 KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
            + G L        RLDG    ++RQKLV++FN+P N      L+S++AG  GINL  ANR
Sbjct: 622  QYGCL--------RLDGTMNVTKRQKLVDKFNDP-NGEEFVFLLSSKAGGCGINLIGANR 672

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            +++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD
Sbjct: 673  LVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVD 732

Query: 1282 R-QQVHRTISKEEMLHLFEF 1300
              + V R  S + +  LF+F
Sbjct: 733  SAEDVERHFSLDSLRELFQF 752


>gi|348517334|ref|XP_003446189.1| PREDICTED: hypothetical protein LOC100700470 [Oreochromis niloticus]
          Length = 1506

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 188/617 (30%), Positives = 284/617 (46%), Gaps = 114/617 (18%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            R+P +I+  L+ +Q  GIRF++ N I+S           GCIL   MGLGKT QVI FL 
Sbjct: 96   RVPYTINRYLRDYQREGIRFIYNNYIRS----------RGCILGDDMGLGKTVQVIGFLA 145

Query: 775  TAMRSVNLGLRTA--------------------LIVTPVNVLHNWKQEFMKWRPSELKPL 814
              +         A                    LIV P++VL+NWK E   W        
Sbjct: 146  AVLHKTGTWEDIANNRPQFLQSQQSSKQMQQVFLIVAPLSVLYNWKDELDTWGH------ 199

Query: 815  RVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP 874
              F    V   R+ E LA  R + G   I  T +  L              +C    +  
Sbjct: 200  --FQCVVVHGLRKEEELA--RIRKGRVEIALTTYETL-------------RLCLDQFNKI 242

Query: 875  D--ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
            D   +V DEAH IKN  +  TQA+K+++C+ RI LTG+ LQNNL E +C++D+   G L 
Sbjct: 243  DWSAVVVDEAHKIKNPDSQITQAMKELRCKVRIGLTGTILQNNLEELWCVLDWAIPGCLD 302

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            S   F+N+F +PIE GQ  ++T   +    +    L  ++  +  R    ++K+ LP K 
Sbjct: 303  SLGHFKNKFSDPIEQGQRHSATKRALATGRKAVRALVRKISHWFFRRTKAIIKEQLPKKD 362

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEK----------------------IRKS 1030
              V+   ++  Q+ +Y+  LD    T    S+EK                      +++ 
Sbjct: 363  DRVVYCSMTEFQQTVYQAVLDSEDVTLLLRSSEKCDCHSRRTRRSCCYKTNTDGVHMKEL 422

Query: 1031 FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQG 1090
            +F+    L ++ NH  +LQ T             +S  +    + V  +  +   +F+  
Sbjct: 423  YFSYLAILRKVANHVALLQSTP-----------GTSKKQEKYVSAVCAKVFQKFPEFVHR 471

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
              ++ F   +  +D +         YSGKM +L  +L       DK L+FS S   LD++
Sbjct: 472  CKNEAF---EALSDPM---------YSGKMKVLQKLLKFYLQKRDKVLIFSLSTKLLDVL 519

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E Y   +            G D+ RLDG T+S ER ++V  FN   +  +   L+ST AG
Sbjct: 520  ESYCMAV------------GLDFSRLDGSTKSKERVQIVRDFNS--SSHINLCLVSTMAG 565

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
             LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE IY RQ+
Sbjct: 566  GLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVTVLRLISLGTVEEVIYLRQI 625

Query: 1271 TKEGLAARVVDRQQVHR 1287
             K+ L + VV ++   R
Sbjct: 626  YKQQLHSSVVGKESSRR 642


>gi|345563719|gb|EGX46704.1| hypothetical protein AOL_s00097g452 [Arthrobotrys oligospora ATCC
            24927]
          Length = 920

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 179/585 (30%), Positives = 287/585 (49%), Gaps = 83/585 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            IS  L+ HQ  G+ F++E ++  +R  +    G G ILA  MGLGKT Q IA L+T ++ 
Sbjct: 268  ISRHLRPHQREGVSFLYEAVM-GMRPYE----GRGAILADEMGLGKTLQTIALLWTLLKQ 322

Query: 780  ---VNLG--LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
                N G  ++ A+IV PV++++NW++EF KW  +E   + VF+ +  S  R       +
Sbjct: 323  NPIYNQGPVVKKAMIVCPVSLINNWRREFKKWLGNER--IHVFVADGKSNVRDFTHGPVY 380

Query: 835  RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 894
                 V ++GY   R+      ++D+    + C       DI++ DE H +K     + Q
Sbjct: 381  ----NVMIVGYERLRS------IQDK---LKQCQV-----DIIIADEGHRLKTAENKSAQ 422

Query: 895  ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 954
            A++ +   RR+ L+G+PLQN+L E++ M DFV  G L +   F+ +F+NPI   Q   + 
Sbjct: 423  AIRSLATPRRVVLSGTPLQNDLREFFVMADFVNPGILENYSTFKKQFENPIVKSQQPEAL 482

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
              D ++ N R   L E +  FV R    ++ K LPPKT  V+  + +  Q  LY+  +  
Sbjct: 483  KADKELGNARKASLAELMNKFVLRRTAKILTKYLPPKTDVVLFCRPTKQQLELYQAII-- 540

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 1074
                N  V+  ++  S     Q +  +        L K KG   +ED E   S+  ++  
Sbjct: 541  ----NTSVAKRQM-GSMDTALQLITLLKKVCNSTSLLKPKG---KEDDEAKLSNSILEEA 592

Query: 1075 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNM 1133
             V G    N N                               SGK+ +L  +L T+    
Sbjct: 593  KVAGSALVNSNS------------------------------SGKLKVLEKLLVTLKETT 622

Query: 1134 GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN 1193
             +K ++ S    TLD++E  L+             KG    RLDG+T +++RQ LV++FN
Sbjct: 623  QEKVVLVSNYTSTLDILERMLN------------SKGFHHLRLDGKTPTNKRQDLVDKFN 670

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
               +      L+S+++G  G+NL  A+R+ + D  WNP  DLQA+ R  R GQ   V+ Y
Sbjct: 671  RVSSDVAFAFLLSSKSGGAGLNLIGASRLFLFDSDWNPATDLQAMARVHRDGQKSHVYIY 730

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLF 1298
            R++  G ++EKIY+RQ+TK+GLA  V+D++      +  E+  LF
Sbjct: 731  RMITTGCIDEKIYQRQITKQGLADSVMDQKAGGSNFTSAELKDLF 775


>gi|302411025|ref|XP_003003346.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
            VaMs.102]
 gi|261358370|gb|EEY20798.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
            VaMs.102]
          Length = 1117

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 186/627 (29%), Positives = 292/627 (46%), Gaps = 128/627 (20%)

Query: 701  YIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHT 760
            Y++N       + +R+P  I   L ++Q  G++++ E   Q++          G I+   
Sbjct: 336  YVIN-------DDLRLPGDIHPSLFSYQKTGVQWLAELYSQNV----------GGIVGDE 378

Query: 761  MGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML- 819
            MGLGKT Q IAF+     S  L  +  +IV P  VL  W  EF +W P+    LRV +L 
Sbjct: 379  MGLGKTVQAIAFIAALHYSKKL-TKPVIIVAPATVLRQWVNEFHRWWPA----LRVSILH 433

Query: 820  ----------EDVS--------RDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 861
                      ED +        RD+    +     K G  L+  T +  L        + 
Sbjct: 434  SSGSGMINLREDDTDEETHSGRRDKSVRKIVDRVVKHGHVLV--TTYNGL--------QT 483

Query: 862  MAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 921
               E+ H   D     V DE H I+N  A+ T   K+++   RI L+G+P+QNNL E + 
Sbjct: 484  YQDELLHVEWD---YAVLDEGHKIRNPNAEITVLCKELRTPNRIILSGTPVQNNLSELWS 540

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMD 980
            + DF+    LG+   FR +F+ PI+ G +  +T+  +    + +  L E +  ++ QR+ 
Sbjct: 541  LFDFIYPMRLGTLVTFRTQFEVPIKQGGYAGATNLQILTAEKCAETLKEAISQYLLQRLK 600

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQ 1040
            ++V   DLP KT  V+  K++  Q   YK+FL+     N  +S    RKS + G   L +
Sbjct: 601  IDVAA-DLPSKTERVLFCKMTDRQLEAYKQFLNSDA-VNQILSAR--RKSLY-GIDILRK 655

Query: 1041 IWNHPGIL--QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
            I NHP ++   L    GY                                          
Sbjct: 656  ICNHPDLIDPHLQNKAGY------------------------------------------ 673

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
             DW +           + SGKM+++ ++L +   +G K+L+FSQS   L++IE +L  L 
Sbjct: 674  -DWGDP----------EKSGKMLVVRNLLQIWKKLGHKTLLFSQSKMMLNVIEKFLGGL- 721

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
                      +   + R+DG T   +RQ L+++FN   +  +   L++TR G LG+NL  
Sbjct: 722  ----------ETVKYVRMDGETSIEKRQSLIDQFN--TDPEIDIFLLTTRTGGLGVNLTG 769

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANR+II D  WNP+ D+QA  RAWR GQT+ V  YRLM  GT+EEKIY RQ+ K+ +  +
Sbjct: 770  ANRIIIFDPDWNPSTDMQARERAWRLGQTRSVEIYRLMTAGTIEEKIYHRQIFKQFMTNK 829

Query: 1279 VVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            V+   +        ++  LF FG+ ++
Sbjct: 830  VLKDPKQRAAFDLSDLYDLFTFGNSQD 856


>gi|449704175|gb|EMD44466.1| DNA repair protein, putative [Entamoeba histolytica KU27]
          Length = 764

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 171/600 (28%), Positives = 295/600 (49%), Gaps = 81/600 (13%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            + +K E A+ I   I   L+ HQ+ G++FM+  I+      + G+   GCILA  MGLGK
Sbjct: 177  IDDKKEPAILIDPYIGKFLRPHQIEGVKFMYHCIM------RGGE--CGCILADEMGLGK 228

Query: 766  TFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
            T Q I  ++T  +  N+  +  +IV P +++ NW++EF KW   E  P++    +   ++
Sbjct: 229  TLQTITLIWTVYKQCNI--KKIVIVCPQSLIGNWEKEFKKWLGVERIPVQTGSSDSSMKE 286

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMI 885
            +  + +  +     V +I Y   R+     HV+     +           ++VCDE H I
Sbjct: 287  KVNDFIRDYIP---VLIISYEQVRS-----HVETLKKTK---------IGLIVCDEGHRI 329

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN  + T  +LK +   R I L+G+P+QN L ++Y +++F   G LG+   F+  F  PI
Sbjct: 330  KNLMSKTNSSLKALGGSRHIILSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPI 389

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
            +  Q  N++ E++++  +R+  L  +L  +V R    V +K LP KT  V+ +K S LQ 
Sbjct: 390  QKAQDGNASIEEIQLGTERAKELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQI 449

Query: 1006 RLYKRFL-DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAED 1064
            +LYK  L +L     D+ S  K         Q   ++ NHP ++       Y + E    
Sbjct: 450  KLYKIMLKELEKKKLDQCSALKY-------IQLFTKLCNHPSLIS-----KYLTEEKISL 497

Query: 1065 SSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLL 1124
            + +DE     + + E+  N                                ++  +  + 
Sbjct: 498  NENDEKCIKGISLNEESSN-------------------------------KFNITIQFIK 526

Query: 1125 DILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            +IL       +K ++ S    TLDL E Y  K     KQ K++    ++ RLDG+T   +
Sbjct: 527  EILIKSK---EKVVLVSNYTKTLDLFEIYF-KQEEEYKQKKIF----NYLRLDGKTSQKQ 578

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            R  +VE+ N+  +      L+S++AG +G+NL   +R+I+ D  WNP  D QA+ R WR 
Sbjct: 579  RDIIVEKINDK-SSNYNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKDKQAMARIWRD 637

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLFEFGDD 1303
            GQ K    YR++  GT+EEKIY+RQ+ K  ++  +++   ++ +++S E+++ +FE   +
Sbjct: 638  GQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLEMGKSLSVEQLMKIFELNTN 697


>gi|403295789|ref|XP_003938808.1| PREDICTED: DNA repair and recombination protein RAD54B [Saimiri
            boliviensis boliviensis]
          Length = 910

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 186/605 (30%), Positives = 298/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 287  VVIDPYVVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 341

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V ++ + E
Sbjct: 342  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQEHKVE 396

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K +K                DIL+CDE H +KN+
Sbjct: 397  DFIK-SVFYSVLVISYEMLLRSLDQIKDIKF---------------DILICDEGHRLKNS 440

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C +RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 441  AIKTTTALISLSCDKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 500

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   V+  +   LQ  LY
Sbjct: 501  REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPVALQIELY 560

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 561  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 605

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  ++   P + N  L       F +K+                S
Sbjct: 606  KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 642

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   ++ ++ S    TL+++            Q    + G  + R
Sbjct: 643  GKLQVLSKLLAVIHELRPTERVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 690

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +  V   L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 691  LDGQTPISQRQQIVDGFNSQ-HSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 749

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE
Sbjct: 750  QAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSLEE 809

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 810  LKNLF 814


>gi|406862002|gb|EKD15054.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1]
          Length = 864

 Score =  248 bits (632), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 186/621 (29%), Positives = 295/621 (47%), Gaps = 95/621 (15%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    V  E+ +  V I   +S  L+ HQ+ G++FM+  +   I      D   GCI+
Sbjct: 249  ILGIKKVVESERPKVPVVIDPRLSKVLRPHQIEGVKFMYRCVTGMIE-----DNANGCIM 303

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q IA ++T ++ S   G   ++ A+I  P +++ NW  E +KW  P  ++
Sbjct: 304  ADEMGLGKTLQCIALMWTLLKQSPEAGKPTIQKAIIACPSSLVKNWANELVKWLGPDAIQ 363

Query: 813  PLRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFR-NLSFGKHVKDRNMAR 864
            P   F ++   S++   + L +W    G      V ++ Y   R N+   K+ K      
Sbjct: 364  P---FAIDGKASKEELQQQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKNTKI----- 415

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                       +++CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ 
Sbjct: 416  ----------GLMLCDEGHRLKNGDSQTFTALNGLNVSRRVILSGTPIQNDLTEYFSLIS 465

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F   G LG+  EFR +++ PI  G+    + +D +  +     L   +  F+ R   +++
Sbjct: 466  FANPGLLGTRMEFRKKYELPILKGRDAAGSDKDRQKGDDTVRELLGIVNKFIIRRTNDIL 525

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
             K LP K   V+   L+P Q  LY  F+   D+      + S              L ++
Sbjct: 526  SKYLPVKYEHVVFCNLAPFQLDLYNHFISSPDIKALLRGKGSQP------LKAIGLLKKL 579

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NHP +L L +D              D+ +  + V  E         +G++ D    + W
Sbjct: 580  CNHPDLLNLPEDL----------PGCDKYLPDDYVPKES--------RGRDRD---IRPW 618

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                          YSGKM +L  +L  +  +  DK ++ S    TLD+ +    KL R 
Sbjct: 619  --------------YSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDMFD----KLCRD 660

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
               G L        RLDG    ++RQKLV+RFN P        L+S++AG  G+NL  AN
Sbjct: 661  RGYGSL--------RLDGTMNVTKRQKLVDRFNNPEGSEF-VFLLSSKAGGCGLNLIGAN 711

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VV
Sbjct: 712  RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVV 771

Query: 1281 DR-QQVHRTISKEEMLHLFEF 1300
            D  + V R  + + +  LF++
Sbjct: 772  DSAEDVERHFTLDSLRELFQY 792


>gi|71651467|ref|XP_814411.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi strain
            CL Brener]
 gi|70879380|gb|EAN92560.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
            cruzi]
          Length = 1047

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 182/597 (30%), Positives = 296/597 (49%), Gaps = 87/597 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLG---CILAHTMGLGKTFQVIAFLYTA 776
            I  KL+ HQ  G++F+++ I        +G++  G    ILA  MGLGKT Q +A +YT 
Sbjct: 358  IGDKLRPHQRAGVQFLFDCI--------TGERMPGYHGAILADEMGLGKTIQTVATIYTC 409

Query: 777  MRSVNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK 833
            +R    G+ TA   L+VTP +++ NW  EF KW       ++ F + + S  +   ++++
Sbjct: 410  LRQGKHGVPTARKCLVVTPSSLVKNWCNEFDKWLGE--GAVKYFSISE-STPKGDRIISR 466

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
            +  +G V +I Y   R     K++   +  R +        +++VCDE H +KN    TT
Sbjct: 467  FDGEGDVLVISYDQLR-----KYITRISTLRSV--------ELVVCDEGHRLKNAEVKTT 513

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            +A+  +  + RI L+G+P+QN+L E++ MV FV  G LGS   F   F+ P+  G+  + 
Sbjct: 514  KAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDC 573

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
                  + + R+H L    + F+ R   ++ +  LPPK    + V+L  LQ   Y++  D
Sbjct: 574  PEHLRSLGSDRAHYLSNLTQRFILRRTQSINESYLPPKVDVTVFVRLGELQSVAYEKLSD 633

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
            L          E           AL ++ NH  +            E   +SS +E  + 
Sbjct: 634  L---------VEGSSCPPLVLISALRKLCNHMDLFY----------EAVLNSSKEEVREG 674

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNM 1133
            + +    P+++              K + +  L E         GKM  +  +L    N 
Sbjct: 675  HGI----PKSV------------LPKGYKSGTLSEAA------GGKMHFVSLMLDELRNN 712

Query: 1134 G--DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 1191
            G  DK ++ S    TLD+I    + + R        +K   +++LDG      RQ++V+R
Sbjct: 713  GDRDKLVIVSNFTQTLDVI----ANMCR--------QKRISFFQLDGSMPVKRRQEVVDR 760

Query: 1192 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1251
            FN P ++ +   L+S++AG +G+NL  ANR+I+ D  WNP  D QA+ R WR GQ K VF
Sbjct: 761  FNVPESQEI-VFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVF 819

Query: 1252 AYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEFGDDENPD 1307
             YRL++ G++EEKIY+RQV+K+GL+A VVD +    +  + EE+  LF +  D   D
Sbjct: 820  IYRLLSAGSIEEKIYQRQVSKQGLSANVVDMKSDSKQHFTLEELRSLFCYRKDTRSD 876


>gi|170058719|ref|XP_001865044.1| transcriptional regulator ATRX [Culex quinquefasciatus]
 gi|167877720|gb|EDS41103.1| transcriptional regulator ATRX [Culex quinquefasciatus]
          Length = 1676

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 147/396 (37%), Positives = 212/396 (53%), Gaps = 38/396 (9%)

Query: 628  KRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSA 687
            K  +K +IR +L   +L +ETK     +K+   R+  L+ +    +K M +     D S 
Sbjct: 1289 KENKKGRIRTMLTQDQLADETK---TAQKDEVVRVAQLKKKNEQLTKFMETFKPGPDESK 1345

Query: 688  GASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVK 747
                          +V     K ++A+ +   I   LK HQ  G+RFM++N   S+  + 
Sbjct: 1346 --------------MVLDYDAKRKQAICVHPHIEKLLKPHQREGVRFMYDNSYGSVNYI- 1390

Query: 748  SGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            +   G GCILAH MGLGKT Q+I  L+T MR   L  R  L++ P + + NW  E   W 
Sbjct: 1391 NKHPGSGCILAHCMGLGKTLQLITLLHTVMRYPQLKTRRVLVICPKSTVMNWSDEIQHWL 1450

Query: 808  PSELKP---LRVFMLED-VSRDRRAELLAKWRAKG----GVFLIGYTAFR---NLSFGKH 856
             S LK    L+VF   D    + + ++L  W A      G  LIGY AFR   N    K 
Sbjct: 1451 GS-LKSGPRLKVFYFPDNADVNDKLKVLGDWYASNENRCGCMLIGYEAFRVLVNYEKRKR 1509

Query: 857  VKDRNMAREIC--------HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALT 908
                 +A +          + L  G D+++CDE H IKN ++  + A+ Q+K +RRI LT
Sbjct: 1510 TPSNFLAAKAAFVKKRVDEYLLDPGADLVICDEGHQIKNKKSAISGAVSQIKTKRRIVLT 1569

Query: 909  GSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHIL 968
            G+P+QNNL EYYCMV+F++  FLGS  EF N + NPI+NGQH +S S  +KIM QRS +L
Sbjct: 1570 GTPIQNNLKEYYCMVNFIKPSFLGSDREFNNLYANPIKNGQHKDSDSRAIKIMKQRSFVL 1629

Query: 969  YEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQ 1004
            + +L  FVQR +  V+K+ LP K  +V+ V L+P+Q
Sbjct: 1630 HNKLSKFVQRREAGVLKEFLPEKFEYVLFVPLTPVQ 1665


>gi|146416597|ref|XP_001484268.1| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1117

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 181/618 (29%), Positives = 287/618 (46%), Gaps = 109/618 (17%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            R+P  I   L  +Q   ++++WE  +Q            G I+   MGLGKT QV++F+ 
Sbjct: 311  RLPGDIYPSLFQYQRTCVQWLWELYLQKT----------GGIIGDEMGLGKTIQVVSFI- 359

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV-SRDRRAELLAK 833
              +    L  +  ++V P  V+  W  EF  W P    PLR  +L  + S   ++ L ++
Sbjct: 360  AGLHYSGLLDKPVIVVVPATVMMQWVNEFHTWWP----PLRCAILHSIGSGMSKSALTSE 415

Query: 834  WRAKGGV----FLIGYTAF----RNLSFGKHVKDRNMAREIC-------------HALQD 872
             + +  +    F +    F    + LS  K++ DR +++                + L  
Sbjct: 416  EKIENMMANDDFDLNEDKFLAQQKGLSNAKNIVDRVVSKGHVLITTYVGLRVYSKYILPH 475

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                 V DE H I+N  +  T   KQ+K   RI L+G+P+QNNL+E + + DFV  G LG
Sbjct: 476  QWGYAVLDEGHKIRNPNSHITLTCKQLKTHNRIILSGTPIQNNLIELWSLFDFVFPGRLG 535

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            +   F  +F  PI  G + N+++  V+   + + +L + +  ++ R   + V +DLP K 
Sbjct: 536  TLPVFEQQFSIPINMGGYANASNVQVQTGYKCAVVLRDLISPYLLRRLKSDVAQDLPKKE 595

Query: 993  VFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ 1049
              V+ VKL+  Q+ +Y++FL   DLH          K +++   G   L +I NHP ++ 
Sbjct: 596  EMVLFVKLTQYQQDMYEKFLSSEDLHAIL-------KGKRNMLTGVDTLRKICNHPDLVD 648

Query: 1050 ---LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 1106
               L + KG                 YN  I  K                          
Sbjct: 649  RELLLRKKG-----------------YNYGIPNK-------------------------- 665

Query: 1107 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1166
                      SGKM++L  +L +  + G ++L+F Q+   LD++E  L  L R     + 
Sbjct: 666  ----------SGKMLVLKGLLQLWQSQGHRTLLFCQTKQMLDILEKLLVNLTRISDGTEY 715

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
            +    ++ R+DG T  S+RQ LV+ FN   N      L++T+ G LG+NL  A+RVII D
Sbjct: 716  F----NYMRMDGSTPISKRQGLVDMFNN--NTNYDVFLLTTKVGGLGVNLTGADRVIIYD 769

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 1286
              WNP+ D+QA  RAWR GQ + +  YRLM  GT+EEKIY RQ+ K  L  +++   +  
Sbjct: 770  PDWNPSTDIQARERAWRLGQKRDIVIYRLMTAGTIEEKIYHRQIFKTFLTNKILKDPKQR 829

Query: 1287 RTISKEEMLHLFEFGDDE 1304
            R     ++  LF  GD E
Sbjct: 830  RFFKVNDLHDLFTLGDPE 847


>gi|189091948|ref|XP_001929807.1| hypothetical protein [Podospora anserina S mat+]
 gi|27803083|emb|CAD60786.1| unnamed protein product [Podospora anserina]
 gi|188219327|emb|CAP49307.1| unnamed protein product [Podospora anserina S mat+]
          Length = 800

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 192/625 (30%), Positives = 300/625 (48%), Gaps = 89/625 (14%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    VV E     V I   ++  L+ HQ+ G++FM++ +   +      +K  GCI+
Sbjct: 185  ILGIKKKVVGEHPRVPVVIDPKLAKILRPHQIEGVKFMYKCVTGMV-----DEKAHGCIM 239

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q I  L+T ++ S + G   ++ A++  P +++ NW  E +KW  P    
Sbjct: 240  ADEMGLGKTLQCITLLWTLLKQSPDAGKTTIQKAIVACPASLVRNWANELVKWLGPDATT 299

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFRNLSFGKHVKDRNMAREICH 868
            P  +      E+++R  R   +A  RA    + ++ Y   R L+              C 
Sbjct: 300  PFAIDGKASKEELTRQLRQWAIATGRAVTRPIIIVSYETLR-LN--------------CE 344

Query: 869  ALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
             L++    +++CDE H +KN       AL  +  +RR+ L+G+P+QN+L EY+ ++ F  
Sbjct: 345  ELRNTEIGLILCDEGHRLKNNDNKLFTALNGLNVKRRVILSGTPIQNDLSEYFSLISFAN 404

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
               LG+  EFR RF+ PI  G+ + ++  + K  ++    L   +  FV R   +++ K 
Sbjct: 405  PDLLGTHLEFRKRFEIPILRGRDSMASEAERKRGDECLAELATIVNKFVIRRTNDLLSKY 464

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 1044
            LP K   V+   L+P Q  LY  FL   D+      + S              L  + NH
Sbjct: 465  LPIKYEHVVFCNLAPFQLDLYNYFLTSPDIQALLRGKGSQP------LKAIGILKNLCNH 518

Query: 1045 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            P +L+L         +D   S      DY       PR+     +G++ D    K W   
Sbjct: 519  PDLLKLP--------DDLPGSEQHYPDDY------VPRDS----RGRDRD---IKPW--- 554

Query: 1105 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
                       YSGKM +L  +L  + ++  DK ++ S    TLDL E    KL R    
Sbjct: 555  -----------YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFE----KLCR---- 595

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
                 +     RLDG+   ++RQKLV++FN+P N      L+S++AG  G+NL  ANR++
Sbjct: 596  ----SRAYPCLRLDGKMLVNKRQKLVDKFNDP-NGDEFVFLLSSKAGGCGLNLIGANRLV 650

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR- 1282
            + D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  
Sbjct: 651  LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSA 710

Query: 1283 QQVHRTISKEEMLHLFEFGDDENPD 1307
            + V R  S + +  LF++  D   D
Sbjct: 711  EDVERHFSLDSLRELFQYRPDTKSD 735


>gi|328705070|ref|XP_001948023.2| PREDICTED: DNA repair and recombination protein RAD54-like
            [Acyrthosiphon pisum]
          Length = 751

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 186/621 (29%), Positives = 297/621 (47%), Gaps = 85/621 (13%)

Query: 702  IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            I+ + ++K    V +  ++S  L+ HQ  G++FM+E  +  +R     +   GCI+A  M
Sbjct: 112  ILKMDKDKILVNVVVDPALSKILRPHQREGVKFMYE-CVTGVRI----EGAYGCIMADEM 166

Query: 762  GLGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFM 818
            GLGKT Q I  ++T ++     +  +  A+IVTP +++ NW  E  KW    +  L V  
Sbjct: 167  GLGKTLQCITLMWTLLKQGPDASPTIHKAIIVTPSSLVKNWCNEIKKWLGGRIGALPVDG 226

Query: 819  LEDVSRDRRAELLAKWRAKGGV---FLIGYTAFRNLSFGKHVKDRNMAREICHA--LQDG 873
                  D+      + R +  V    +I Y  FR+                 HA  LQ+ 
Sbjct: 227  GGKEQVDKVITGFVQARGRRTVDPILVISYETFRS-----------------HASLLQNA 269

Query: 874  PDI--LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             DI  ++CDE H +KN    T ++L  +K +RR+ L+G+P+QN+L+EY+ +V FV EG L
Sbjct: 270  EDIGLVLCDEGHRLKNCENQTYRSLMALKAKRRVLLSGTPIQNDLLEYFSLVHFVNEGIL 329

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            G++ EFR +++ PI  GQ + +T  + K   +R   L   +   + R    ++ K LP K
Sbjct: 330  GTAQEFRRQYETPIVRGQDSCATDSERKKAAERLEQLISLVNRCLIRRTSALLSKYLPVK 389

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL 1050
            T  V+ +KL+PLQ  LY   L     T     N+ K+  +  A    L ++  HP    L
Sbjct: 390  TEHVVCIKLTPLQTDLYLHLLKSDMVTKSIKGNDGKVTSNALAAITLLKKLCAHP---DL 446

Query: 1051 TKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHT 1110
              DK     +  E+S       Y                                +  H+
Sbjct: 447  IIDKIMNGSDGFENSKHLLPPTY--------------------------------IAAHS 474

Query: 1111 YKEL--DYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
             K+L  + S K+++L  +L +  +   D+ ++ S    TL+L E  L+KL          
Sbjct: 475  KKKLMIELSSKLMVLDTMLAVIKTTTTDRVVLISNYTQTLELFE-RLAKL---------- 523

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
             +   + RLDG   + +R K V+  N P +  V   ++S++AG  G+NL  ANR+++ D 
Sbjct: 524  -RNYTFVRLDGSMTAKKRAKAVDDINSPTSG-VFLFMLSSKAGGCGLNLIGANRLVMFDP 581

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVH 1286
             WNP  D QA+ R WR GQ KP F YR +A G++EEK+ +RQ  K+ L++ VVD  + V 
Sbjct: 582  DWNPANDDQAMARVWRDGQKKPCFVYRFLATGSIEEKMMQRQAHKKALSSSVVDCEEDVA 641

Query: 1287 RTISKEEMLHLFEFGDDENPD 1307
            R  +  E+  LF    D   D
Sbjct: 642  RHFTVSELRTLFNLRQDTISD 662


>gi|239608107|gb|EEQ85094.1| DNA repair and recombination protein RAD54 [Ajellomyces dermatitidis
            ER-3]
          Length = 795

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 189/624 (30%), Positives = 294/624 (47%), Gaps = 113/624 (18%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K +   R+P  I  +L    + HQV G++F++      I       K  GCI+A  M
Sbjct: 180  IKKKVDARPRVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDP-----KANGCIMADEM 234

Query: 762  GLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTPVNVLHNWKQEFMKWR-PSELKPLRV 816
            GLGKT Q I  L+T ++      +T +    I  P  ++ NW  E +KW     + P   
Sbjct: 235  GLGKTLQCITLLWTLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGEGAVSP--- 291

Query: 817  FMLEDVSRDRRAELLAK---WRAKGG------VFLIGYTAFR-NLSFGKHVKDRNMAREI 866
            F+++   +  +AEL+++   W    G      V ++ Y   R N+               
Sbjct: 292  FVID--GKASKAELISQLRQWAVSSGRAVVRPVLIVSYETLRLNVD-------------- 335

Query: 867  CHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
               L+D P  +L+CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ +++F
Sbjct: 336  --ELKDTPIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNF 393

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVK 985
                 LG+  EF  +++ PI  G+  ++T ED K  ++    L   +  F+ R   +++ 
Sbjct: 394  ANPNILGTRSEFHKKYEMPILRGRDADATDEDRKKGDESVTELLNVVNKFIIRRTNDILS 453

Query: 986  KDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            K LP K   V+   L+P Q  LY  F+   D+      + S              L ++ 
Sbjct: 454  KYLPVKYEHVVFCGLAPFQTDLYNHFIQSPDIKSLLRGKGSQP------LKAIGLLKKLC 507

Query: 1043 NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWW 1102
            NHP +L L  D   P  E                                   FF  D+ 
Sbjct: 508  NHPDLLNLGTD--LPGSEQ----------------------------------FFPDDY- 530

Query: 1103 NDLLHEHTYKELD----YSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
              +  E   ++ D    YSGKM++L  +L  +  +  DK ++ S    TLDL E    +L
Sbjct: 531  --VPMECRGRDRDVRSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----RL 584

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
             R  + G L        RLDG    ++RQKLV++FN+P N      L+S++AG  GINL 
Sbjct: 585  CRTRQYGCL--------RLDGTMNVTKRQKLVDKFNDP-NGEEFVFLLSSKAGGCGINLI 635

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++
Sbjct: 636  GANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSS 695

Query: 1278 RVVDR-QQVHRTISKEEMLHLFEF 1300
             VVD  + V R  S + +  LF+F
Sbjct: 696  CVVDSAEDVERHFSLDSLRELFQF 719


>gi|328786654|ref|XP_624551.3| PREDICTED: DNA repair and recombination protein RAD54B-like [Apis
            mellifera]
          Length = 821

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 176/588 (29%), Positives = 281/588 (47%), Gaps = 96/588 (16%)

Query: 703  VNVVRE------KGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCI 756
            VN+ R+      + E+ V + + +   L+ HQ  GI F++E I+    KV +     G I
Sbjct: 203  VNISRDCKKNMLQNEQEVSVDTCLVNVLRPHQRHGIVFLYECIMG--LKVPNY---FGAI 257

Query: 757  LAHTMGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            LA  MGLGKT Q I  ++T ++    G   L+  LIVTP ++ +NW +EF  W    L  
Sbjct: 258  LADEMGLGKTLQCITIIWTLLKKGPYGYPILKYVLIVTPSSLCNNWNKEFKHW----LGF 313

Query: 814  LRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG 873
             R+      ++++      K + +  + +I Y     + + + ++            Q  
Sbjct: 314  HRISPYVVNAKNKPNNF--KKQIRNSIMIISYEML--IKYQQEIE------------QIA 357

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
             D+++CDE H +KN    TT+ L  + C+RRI LTG+P+QN+L E++ ++DFV    LGS
Sbjct: 358  FDLIICDEGHRLKNNDIKTTKVLSNLNCKRRILLTGTPVQNDLQEFFALIDFVNPVILGS 417

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
            S EF+N ++ PI   Q  N++   + +  +R++ L+E+ K F+ R    ++ K LP K  
Sbjct: 418  SSEFKNYYEKPIVASQCPNASCHVISLGTERANELHEKTKCFILRRTQEIINKYLPSKHE 477

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD 1053
             VI  +LS  Q  LY R  +L  F+   + N  I  S      AL +I NHP +    K+
Sbjct: 478  LVIFCRLSDEQEDLYSRITNL-WFSKSVLPNNNI--SHLTLITALKKICNHPELFYNEKN 534

Query: 1054 KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE 1113
              Y ++   ++ +                                               
Sbjct: 535  DLYLNKVSIKNITRK--------------------------------------------- 549

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
              Y GK+ ++  ++       +K ++ S    TLDL+E       R      L      +
Sbjct: 550  -GYYGKISIVQTLIKNLKKTNEKLVLISYYTQTLDLLE-------RVCNMECL-----QF 596

Query: 1174 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
             RLDG T SS R K++E+FN   N   K  L+S +AG +G+NL  A+R+I+ D  WNP  
Sbjct: 597  LRLDGNTTSSTRSKIIEQFNST-NDNNKIFLLSAKAGGVGLNLPGASRLILFDSDWNPAS 655

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            D QA+ R WR GQ   V+  RL+  GT+EEKI++RQ+ K  L+  V+D
Sbjct: 656  DSQAMARIWRDGQKNDVYILRLLTTGTIEEKIFQRQINKANLSETVID 703


>gi|296411575|ref|XP_002835506.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629290|emb|CAZ79663.1| unnamed protein product [Tuber melanosporum]
          Length = 812

 Score =  247 bits (631), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 191/610 (31%), Positives = 293/610 (48%), Gaps = 91/610 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +S  L+ HQV GI+FM+  +        SG     CI+A  MGLGKT Q IA +
Sbjct: 213  VVIDPRLSKVLRPHQVEGIKFMYRCVTGMTDAAASG-----CIMADEMGLGKTLQCIALM 267

Query: 774  YTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED-VSRDRRA 828
            +T ++ S   G   ++  ++V P +++ NW  E +KW   +   +  F ++  VS+    
Sbjct: 268  WTLLKQSPEPGKPTIQKCVVVCPSSLVGNWASELVKWLGKDA--INPFAIDGKVSKAELK 325

Query: 829  ELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
              L +W    G      V ++ Y + R      H  D         ++  G  +L+ DE 
Sbjct: 326  AQLKQWAISSGRSVVRPVLIVSYESLR-----LHTSD-------LASIPIG--LLLADEG 371

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN    T +AL  +   RR+ L+G+P+QN+L EY+ +++F    FLG+ +EFR +++
Sbjct: 372  HRLKNRDNQTYKALMTLNVDRRVILSGTPIQNDLSEYFALLNFANPNFLGTHNEFRKQYE 431

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
             PI  G+  + + +D K  ++R   L + +  F+ R   +++ K LP K   V+  KLSP
Sbjct: 432  LPILRGRDADGSEDDRKKGDERLAELLQLVNKFIIRRTNDILSKYLPVKYEHVVFCKLSP 491

Query: 1003 LQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR 1059
             Q  LY  F+   D+      + S              L ++ NHP +L L+        
Sbjct: 492  FQTDLYNYFITSPDIKSILRGKGSQP------LKAIGLLKKLCNHPDLLNLS-------- 537

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
            ED     S    DY       P++     +G++ +    K W              YSGK
Sbjct: 538  EDLPGCESLYPDDY------VPKDA----RGRDRE---VKVW--------------YSGK 570

Query: 1120 MVLLLDILTMCSN-MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
            M++L  +L        DK ++ S    TLD+ E    KL R    G L        RLDG
Sbjct: 571  MMVLDRMLARIQRETKDKIVLISNYTQTLDVFE----KLCRSRGYGAL--------RLDG 618

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
                S+R KLV +FN+P ++     L+S++AG  GINL  ANR+++ D  WNP  D QA+
Sbjct: 619  TMNGSKRTKLVAKFNDPDSEEF-VFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQAL 677

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHL 1297
             R WR GQ K  F YR +A GT+EEKI++RQ  K+ L+  VVD  + V R    + +  L
Sbjct: 678  ARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSTSVVDGVEDVERHFGLDGLKQL 737

Query: 1298 FEFGDDENPD 1307
            F F  + N D
Sbjct: 738  FRFQPNTNSD 747


>gi|448525548|ref|XP_003869143.1| Rad54 protein [Candida orthopsilosis Co 90-125]
 gi|380353496|emb|CCG23006.1| Rad54 protein [Candida orthopsilosis]
          Length = 836

 Score =  247 bits (630), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 182/602 (30%), Positives = 293/602 (48%), Gaps = 88/602 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAHTMGLGKTFQVI 770
            V I   ++  L+ HQ+ G++F++        +  +G    K  GCI+A  MGLGKT Q +
Sbjct: 235  VVIDPKLAKILRPHQIAGVKFLY--------RCTAGLMDPKAKGCIMADEMGLGKTLQCL 286

Query: 771  AFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDR 826
              ++T +R    G RT    +IV P +++ NW  E +KW     L PL +      S D 
Sbjct: 287  TLMWTLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAIDGKSTKSNDL 346

Query: 827  RAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 880
             A L  +W    G      V +I Y   R     ++V D+    E+         +++ D
Sbjct: 347  GAAL-QQWSTAQGRNIVRPVLIISYETLR-----RNV-DKLAGTEV--------GLMLAD 391

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H +KN  + T  AL  ++C RR+ L+G+P+QN+L EY+ +++F   G+LG+ ++FR  
Sbjct: 392  EGHRLKNGESLTFTALNSLRCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRKN 451

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKL 1000
            F+N I  G+  ++T ++ +  + +   L + +  F+ R   +++ K LP K  +V+   L
Sbjct: 452  FENAILRGRDADATDKEREKGDAKLLELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGL 511

Query: 1001 SPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFA-GYQALAQIWNHPGILQLTKDKGYPSR 1059
            SP+Q+ LY  F          +++ +I+K     G Q L  I     +         P  
Sbjct: 512  SPMQKSLYNHF----------ITSPEIKKLLKGIGSQPLKAIGMLKKLCNHPDLLDLPDD 561

Query: 1060 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 1119
             +  ++   E+ + ++    + R +  +  GK    F   + +   +H  T         
Sbjct: 562  LEGCENLIPEDYESSITATGRKREVQTWFSGK----FLILERFLHKIHRET--------- 608

Query: 1120 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
                           DK ++ S    TLDLIE    K+ R  K G L        RLDG 
Sbjct: 609  --------------DDKIVLISNYTQTLDLIE----KMCRNKKYGSL--------RLDGT 642

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
               ++RQKLV+RFN+P N      L+S++AG  GINL  ANR+I++D  WNP  D QA+ 
Sbjct: 643  MNINKRQKLVDRFNDP-NGSEFIFLLSSKAGGCGINLIGANRLILIDPDWNPASDQQALA 701

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLF 1298
            R WR GQ K  F YR ++ GT+EEKI++RQ  K  L++ VVD ++ V R  S + +  LF
Sbjct: 702  RVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSADNLKQLF 761

Query: 1299 EF 1300
             +
Sbjct: 762  MY 763


>gi|327349292|gb|EGE78149.1| DsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis ATCC 18188]
          Length = 849

 Score =  247 bits (630), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 193/645 (29%), Positives = 304/645 (47%), Gaps = 115/645 (17%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMW 736
            LD  L   +  ++LG          +++K +   R+P  I  +L    + HQV G++F++
Sbjct: 219  LDAPLVHKSLADILG----------IKKKVDARPRVPVVIDPRLAKVLRPHQVEGVKFLY 268

Query: 737  ENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTAL----IVTP 792
                  I       K  GCI+A  MGLGKT Q I  L+T ++      +T +    I  P
Sbjct: 269  RCTTGMI-----DPKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKTTIQKCVIACP 323

Query: 793  VNVLHNWKQEFMKWR-PSELKPLRVFMLEDVSRDRRAELLAK---WRAKGG------VFL 842
              ++ NW  E +KW     + P   F+++   +  +AEL+++   W    G      V +
Sbjct: 324  STLVKNWANELVKWLGEGAVSP---FVID--GKASKAELISQLRQWAVSSGRAVVRPVLI 378

Query: 843  IGYTAFR-NLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADTTQALKQVK 900
            + Y   R N+                  L+D P  +L+CDE H +KN  + T  AL  + 
Sbjct: 379  VSYETLRLNVD----------------ELKDTPIGLLLCDEGHRLKNGDSQTFTALNSLN 422

Query: 901  CQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKI 960
              RR+ L+G+P+QN+L EY+ +++F     LG+  EF  +++ PI  G+  ++T ED K 
Sbjct: 423  VDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKYEMPILRGRDADATDEDRKK 482

Query: 961  MNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGF 1017
             ++    L   +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   D+   
Sbjct: 483  GDESVTELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNHFIQSPDIKSL 542

Query: 1018 TNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVI 1077
               + S              L ++ NHP +L L  D             S++    + V 
Sbjct: 543  LRGKGSQP------LKAIGLLKKLCNHPDLLNLGTDL----------PGSEQFFPDDYVP 586

Query: 1078 GEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDK 1136
             E         +G++ D    + W              YSGKM++L  +L  +  +  DK
Sbjct: 587  ME--------CRGRDRD---VRSW--------------YSGKMMVLDRMLARIRQDTNDK 621

Query: 1137 SLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPL 1196
             ++ S    TLDL E    +L R  + G L        RLDG    ++RQKLV++FN+P 
Sbjct: 622  IVLISNYTQTLDLFE----RLCRTRQYGCL--------RLDGTMNVTKRQKLVDKFNDP- 668

Query: 1197 NKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLM 1256
            N      L+S++AG  GINL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +
Sbjct: 669  NGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFI 728

Query: 1257 AHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEF 1300
            A GT+EEKI++RQ  K+ L++ VVD  + V R  S + +  LF+F
Sbjct: 729  ATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQF 773


>gi|452822792|gb|EME29808.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria sulphuraria]
          Length = 924

 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 183/615 (29%), Positives = 276/615 (44%), Gaps = 108/615 (17%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
             +R+P+ I  +L  +Q VG++++WE   Q          G+G I+   MGLGKT QVI  
Sbjct: 187  GLRLPADIYDRLFPYQQVGVQWLWELHCQ----------GVGGIVGDEMGLGKTIQVIVL 236

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLA 832
            L  ++   +L      IV P  +L  WK+EF  W PS     RV ++   + D    ++ 
Sbjct: 237  L-ASLSYSHLLPGPVCIVAPATLLSQWKREFATWWPS----FRVRIMHKSAGDGDLWIVE 291

Query: 833  KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 892
                +G + +  Y   R   F +++        + H      D ++ DE H I+N  A+ 
Sbjct: 292  DIIEQGDILVTSYEQVRR--FHEYI--------LVHKW----DYVILDEGHRIRNPDAEI 337

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
            T   K+ K   RI +TG+PLQN L E + + DFV  G LG+   F  +F  PI  G + N
Sbjct: 338  TLVCKRFKTVHRIIMTGAPLQNRLKELWSLFDFVYPGKLGTLPVFEEQFSVPITLGSYLN 397

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            +T   V    + + +L   +  ++ R     V   LP K   ++  KL+  QR LYK++L
Sbjct: 398  ATPLQVHTAYKCASVLRNLVSPYLLRRLKKDVALQLPKKQEQILFCKLTKEQRELYKKYL 457

Query: 1013 DLHGFTNDRVSNEKIRKS--FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
                  N R   + ++ S         L +I NHP +                    DEN
Sbjct: 458  ------NSRELQKVLQGSVNMLTAVSVLRKICNHPDLY-------------------DEN 492

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 1130
                                              L  +  Y E   +GK+V+L  +L   
Sbjct: 493  A---------------------------------LEDDRRYGEWTRAGKLVVLDQVLLSW 519

Query: 1131 SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVE 1190
            S    + L+FSQS   LD++E +  +            +   + R+DG T   ER KL++
Sbjct: 520  SKDDSRVLIFSQSRAMLDILEMFARQ------------RRYTYLRMDGETAMQERMKLID 567

Query: 1191 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 1250
             FN+  +  V   L++T+ G LGINL  ANRV++ D  WNP+ DLQA  RAWR GQ + V
Sbjct: 568  SFNQ--DDEVFLFLLTTKVGGLGINLTGANRVVLYDPDWNPSTDLQARERAWRIGQKRDV 625

Query: 1251 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD-----EN 1305
              YRL+  GT+EEKIY RQ+ K+ L  +V+   Q  R    +++  LF  GD+     E 
Sbjct: 626  IIYRLVTSGTIEEKIYHRQIFKQLLTNKVLKDAQQTRFFRPKDLFDLFTLGDEYEDGTET 685

Query: 1306 PDPLTAVSKENGQGS 1320
             D  +  S     GS
Sbjct: 686  GDLFSGTSAVEWTGS 700


>gi|344271724|ref|XP_003407687.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Loxodonta africana]
          Length = 713

 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 189/634 (29%), Positives = 287/634 (45%), Gaps = 120/634 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G +F++ + IQ          G GCIL   MGLGKT QVI+FL  
Sbjct: 127  IPYTINRYLRDYQREGAQFLYGHYIQ----------GRGCILGDDMGLGKTVQVISFLAA 176

Query: 776  AM------------------RSVN------LGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                  RS+          +  LIV P++VL+NW+ E   W     
Sbjct: 177  VLHKKGTREDIENNMPEFLLRSMKKETPSCTAKKMFLIVAPLSVLYNWRDELDTW----- 231

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D  +EL+   R K G   I  T +  L          +  +  ++L+
Sbjct: 232  GYFRVIVLHGNKKD--SELI---RVKQGKCEIALTTYETL---------RLCLDEFNSLE 277

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN  A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 278  WSA--VIVDEAHRIKNPTARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 335

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS   F+ +F +P+E+GQ   +T  ++    +    L +++ G+  R    ++K  LP K
Sbjct: 336  GSRSHFKKQFSDPVEHGQRHTATKRELATGRKAMRRLAKKMSGWFLRRTKTLIKDQLPKK 395

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 396  EDRMVYCSLTDFQKAVYQTVLETEDITLILRSSEPCTCNSGRKRRNCCYKTNSQGETVKT 455

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
             +F+    L ++ NH  +LQ            A  +S  +    + +  +      DF++
Sbjct: 456  LYFSYLAVLQKVANHVALLQ------------AASTSEQQKTLISRICDQVFSRFPDFVR 503

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD+
Sbjct: 504  KSKDAAF------------ETISDPKYSGKMKVLQQLLNHCRKNKDKVLLFSFSTKLLDV 551

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            ++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST A
Sbjct: 552  LQQY------------CMAAGLDFRRLDGSTKSEERIKIVKEFNSA--QDVNICLVSTMA 597

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQ
Sbjct: 598  GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 657

Query: 1270 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            V K+ L   VV  +   R       SKE    LF
Sbjct: 658  VYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 691


>gi|354545782|emb|CCE42510.1| hypothetical protein CPAR2_201530 [Candida parapsilosis]
          Length = 836

 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 190/634 (29%), Positives = 305/634 (48%), Gaps = 104/634 (16%)

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVK 747
            E+LG      IV     K  +   +P  I  KL    + HQ+ G++F++        +  
Sbjct: 215  EILG------IVTNPEAKLAQYPNVPVVIDPKLAKILRPHQIAGVKFLY--------RCT 260

Query: 748  SG---DKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQ 801
            +G    K  GCI+A  MGLGKT Q +  ++T ++    G RT    +IV P +++ NW  
Sbjct: 261  AGLMDPKAKGCIMADEMGLGKTLQCLTLMWTLLKQSPRGKRTIEKCIIVCPSSLVRNWAN 320

Query: 802  EFMKWR-PSELKPLRVFMLEDVSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNL 851
            E +KW     L PL V    D    +  EL   L +W    G      V +I Y   R  
Sbjct: 321  EIVKWLGEGVLTPLAV----DGKSTKSNELGAALQQWSTAQGRNIVRPVLIISYETLR-- 374

Query: 852  SFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSP 911
               ++V D+    E+         +++ DE H +KN  + T  AL  ++C+RR+ L+G+P
Sbjct: 375  ---RNV-DKLAGTEV--------GLMLADEGHRLKNGESLTFTALNSLRCERRVILSGTP 422

Query: 912  LQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQ 971
            +QN+L EY+ +++F   G+LG+ ++FR  F+N I  G+  ++T ++ +  + +   L + 
Sbjct: 423  IQNDLSEYFSLLNFANPGYLGTRNDFRKNFENAILRGRDADATDKEREKGDAKLIELSQL 482

Query: 972  LKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF 1031
            +  F+ R   +++ K LP K  +V+   LSP+Q+ LY  F          +++ +I+K  
Sbjct: 483  VSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKDLYNHF----------ITSPEIKKLI 532

Query: 1032 FA-GYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQG 1090
               G Q L  I     +         P   +  +S   E+ + ++    + R++  +  G
Sbjct: 533  KGIGSQPLKAIGMLKKLCNHPDLLDLPDDLEGCESLKPEDYESSITATGRRRDVQTWFSG 592

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
            K    F   + +   +H  T                        DK ++ S    TLDLI
Sbjct: 593  K----FMILERFLHKIHRET-----------------------DDKIVLISNYTQTLDLI 625

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E    K+ R  K G L        RLDG    ++RQKLV++FN+P N      L+S++AG
Sbjct: 626  E----KMCRNKKYGAL--------RLDGTMNINKRQKLVDKFNDP-NGSEFIFLLSSKAG 672

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
              GINL  ANR+I++D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ 
Sbjct: 673  GCGINLIGANRLILIDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQS 732

Query: 1271 TKEGLAARVVD-RQQVHRTISKEEMLHLFEFGDD 1303
             K  L++ VVD ++ V R  S + +  LF +  D
Sbjct: 733  MKMSLSSCVVDEKEDVERLFSADNLRQLFMYQPD 766


>gi|390335885|ref|XP_783733.2| PREDICTED: DNA repair and recombination protein RAD54-like
            [Strongylocentrotus purpuratus]
          Length = 761

 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 179/612 (29%), Positives = 301/612 (49%), Gaps = 91/612 (14%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            ++V +EK    V +   +S  L+ HQ  G++F+W+ +  + R+++      GCI+A  MG
Sbjct: 150  LSVDKEKQPVHVVVDPILSKVLRPHQREGVKFLWDCV--TGRRIEGS---FGCIMADEMG 204

Query: 763  LGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML 819
            LGKT Q +  ++T +R        +   ++V P +++ NW  E  KW   ++ PL +   
Sbjct: 205  LGKTLQCVTLMWTLLRQSPDCKPEIDKVIVVAPSSLVKNWYNEIRKWLGGKVNPLAIDSG 264

Query: 820  EDVSRDRRAELLAKW---RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI 876
                 DR  +   +    R    + +I Y  FR            +  E+ H  + G  +
Sbjct: 265  TKKEIDRNLDSFMRQQGRRTPTPILIISYETFR------------LHAEVLHKGEVG--L 310

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN    T QAL  +  +RR+ L+G+P+QN+L+EY+ +V +V +G LG++ E
Sbjct: 311  VICDEGHRLKNCENQTYQALNGLPGKRRVLLSGTPIQNDLLEYFSLVHYVNQGILGTAQE 370

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQ----RMDMNVVKKDLPPKT 992
            F+  F++PI  G+ + ++ ++     QR     +QL   V     R   +++ K LP K 
Sbjct: 371  FKKNFESPILRGRDSCASDKE----KQRGQEKLQQLAILVNKCIIRRTASLLAKYLPVKE 426

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
              V+  +L+ +Q  +Y++++       +     + + S  +    L ++ NHP    L  
Sbjct: 427  EQVVCCRLTXMQSCIYQQYVK--AMMKECRMKTQGKVSTLSAITHLKKLCNHPA---LVY 481

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 1112
            DK   S++   D                   + +F  G N+                  K
Sbjct: 482  DKCVSSKDGFHDM------------------LQNFPPGYNN------------------K 505

Query: 1113 EL--DYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKK 1169
            +L  + SGKM +L  IL +  ++  DK ++ S    TLD+ E  L +L           +
Sbjct: 506  QLRPELSGKMQVLDYILAITKTSSSDKVVLVSNYTQTLDVFE-QLCRL-----------R 553

Query: 1170 GKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
            G  + RLDG     +R K+V+ FN P N      ++S++AG  G+NL  ANR+++ D  W
Sbjct: 554  GYLFVRLDGSMSIKKRAKVVDSFNNP-NSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDW 612

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRT 1288
            NP  D QA+ R WR GQ K  F YRL+A GT+EEKI++RQ  K+ L++ VVD ++ V R 
Sbjct: 613  NPANDDQAMARVWRDGQKKRCFIYRLLATGTIEEKIFQRQAHKKALSSCVVDNEEDVERH 672

Query: 1289 ISKEEMLHLFEF 1300
             S +E+  LF F
Sbjct: 673  FSVDELKDLFRF 684


>gi|149055561|gb|EDM07145.1| alpha thalassemia/mental retardation syndrome X-linked homolog
            (human) [Rattus norvegicus]
          Length = 883

 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 134/297 (45%), Positives = 188/297 (63%), Gaps = 15/297 (5%)

Query: 787  ALIVTPVNVLHNWKQEFMKWRP--SELKPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLI 843
            AL+V P+N   NW  EF KW+   ++ + L V  L  V R + R+ +L +W+  GGV +I
Sbjct: 15   ALVVCPLNTALNWMNEFEKWQEGLNDAEKLEVSELATVKRPQERSYMLQRWQEDGGVMII 74

Query: 844  GYTAFRNLSFGKHVKDRNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQ 902
            GY  +RNL+ G++VK R +      AL D GPD +VCDE H++KN  +  ++A+  +K +
Sbjct: 75   GYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIKSR 134

Query: 903  RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMN 962
            RRI LTG+PLQNNL+EY+CMV+F++E  LGS  EFRNRF NPI+NGQ  +ST  DV++M 
Sbjct: 135  RRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMK 194

Query: 963  QRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD-LHGFTNDR 1021
            +R+HILYE L G VQR D   + K LPPK  +V+ V+++ +Q +LY+ +LD L G  N  
Sbjct: 195  KRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTAIQCKLYQYYLDHLTGVGNST 254

Query: 1022 VSNE-KIRKSFFAGYQALAQIWNHPGILQL----TKDKGYPSREDAED----SSSDE 1069
                 K     F  +Q L++IW HP  LQL     ++KGY   ED+ D    S SDE
Sbjct: 255  DGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGY-FDEDSMDEFIASDSDE 310



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/219 (50%), Positives = 146/219 (66%), Gaps = 10/219 (4%)

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            DW+ D + +   + L++SGKMVLL +IL M   +GDK LVFSQS+ +LDLIE +L    R
Sbjct: 391  DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 450

Query: 1160 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
               + K           W +  D+YRLDG T +  R+K  E FN+  N R +  +IST+A
Sbjct: 451  EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKA 510

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 511  GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 570

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
            VTK+ L+ RVVD+QQV R  +  E+  L+ F  D   DP
Sbjct: 571  VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP 609


>gi|336272956|ref|XP_003351233.1| RAD54 protein [Sordaria macrospora k-hell]
 gi|380092753|emb|CCC09506.1| putative RAD54 protein [Sordaria macrospora k-hell]
          Length = 824

 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 196/679 (28%), Positives = 320/679 (47%), Gaps = 112/679 (16%)

Query: 638  ILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDA 697
            +L D  + ++ K   AIE++++E                  V +D  L   +  E+LG  
Sbjct: 153  VLYDPTVDDKPKEPKAIEEKQKE----------------PEVKVDAPLVHKSLAEILG-- 194

Query: 698  ITGYIVNVVREKGE-EAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKG 752
                    +++K E E  R+P  I  +L    + HQ+ G+RFM+  +   I      +K 
Sbjct: 195  --------IKKKVEGEHPRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMI-----DEKA 241

Query: 753  LGCILAHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRP 808
             GCI+A  MGLGKT Q I  L+T ++ S + G   ++ A++  P +++ NW  E +KW  
Sbjct: 242  NGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLG 301

Query: 809  SELKPLRVFMLE-DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
            ++   +  F ++   S++     L +W    G         R+++    +      R   
Sbjct: 302  ADA--ITPFAIDGKASKEELTRQLRQWAIASG---------RSVTRPVIIVSYETLRLNA 350

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              L+  P  +++CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F 
Sbjct: 351  DELKGTPIGLMLCDEGHRLKNGDSQTFSALNSLNVSRRVILSGTPIQNDLSEYFALISFA 410

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
                LG+  EFR RF+ PI  G+  +++  + K  ++    L   +  F+ R   +++ K
Sbjct: 411  NPDLLGTRLEFRKRFEIPILRGRDADASEAERKRGDECLAELLAVVNKFIIRRTNDILSK 470

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
             LP K   V+   L+P Q  LY  F+   D+      + S              L ++ N
Sbjct: 471  YLPVKYEHVVFCNLAPFQLDLYNYFVASPDIQALLRGKGSQP------LKAINMLKKLCN 524

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP +L L+ D     +   +D    E                   +G++ D    K W  
Sbjct: 525  HPDLLDLSADLPGCEQYWPDDYVPKE------------------ARGRDRD---VKPW-- 561

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
                        YSGKM +L  +L  + ++  DK ++ S    TLDL E    +L R  +
Sbjct: 562  ------------YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFE----RLCRNRQ 605

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
             G L        RLDG    ++RQKLV++FN+P  +     L+S++AG  G+NL  ANR+
Sbjct: 606  YGCL--------RLDGTMNVNKRQKLVDKFNDPEGEEF-VFLLSSKAGGCGLNLIGANRL 656

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            ++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD 
Sbjct: 657  VLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDS 716

Query: 1283 -QQVHRTISKEEMLHLFEF 1300
             + V R  S + +  LF +
Sbjct: 717  AEDVERHFSLDSLRELFTY 735


>gi|425768693|gb|EKV07211.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum PHI26]
 gi|425775851|gb|EKV14096.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum Pd1]
          Length = 862

 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 185/621 (29%), Positives = 286/621 (46%), Gaps = 97/621 (15%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            V ++ +  V I   +   L+ HQ+ G++F++  +   + K  +G     CI+A  MGLGK
Sbjct: 251  VEDRPKVPVVIDPRLCKVLRPHQIEGVKFLYRCVTGLVDKNANG-----CIMADGMGLGK 305

Query: 766  TFQVIAFLYTAMRSVNLGLRTAL----IVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 821
            T Q I  ++T ++  +   +T +    I  P +++ NW  E +KW   +      F ++ 
Sbjct: 306  TLQCITLMWTLLKQSSEAGKTTIQKCVIACPSSLVGNWANELVKWLGKDAT--TPFAID- 362

Query: 822  VSRDRRAELLAK---WRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
              +  +AEL+ +   W    G      V ++ Y   R  +                 L D
Sbjct: 363  -GKATKAELITQIKQWAIASGRGIVRPVLIVSYETLRMYA---------------DTLND 406

Query: 873  GP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             P  +L+CDE H +KN  + T  AL Q+   RR+ L+G+P+QN+L EY+ ++ F     L
Sbjct: 407  TPIGLLLCDEGHRLKNKESLTWTALNQLNVTRRVILSGTPIQNDLSEYFALLHFANPNLL 466

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS  EFR RF+ PI  G+    T E+ K+ ++R   L   +  F+ R    ++ K LP K
Sbjct: 467  GSQAEFRKRFELPILRGRDAAGTDEEKKLGDERLQELSGIVNKFIIRRTNELLSKYLPVK 526

Query: 992  TVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL 1048
               V+   +S  QR LY  F+   ++      + S              L ++ NHP +L
Sbjct: 527  YEHVVFCNMSQFQRGLYNHFIKSPEIQSLLRGKGSQP------LKAIGLLKKLCNHPDLL 580

Query: 1049 QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
             L  D         ED S  +    +  I                     K W       
Sbjct: 581  DLANDLPGCEHTFPEDYSPPDTRGRDREI---------------------KSW------- 612

Query: 1109 HTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
                   YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    G L 
Sbjct: 613  -------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRGYGSL- 660

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
                   RLDG     +R KLV++FN+P  +     L+S++AG  G+NL  ANR+++ D 
Sbjct: 661  -------RLDGTMNIKKRTKLVDKFNDPDGQEF-VFLLSSKAGGCGLNLIGANRLVLFDP 712

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVH 1286
             WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  + V 
Sbjct: 713  DWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVE 772

Query: 1287 RTISKEEMLHLFEFGDDENPD 1307
            R  S + +  LF+F  D   D
Sbjct: 773  RHFSLDSLRELFQFKPDTRSD 793


>gi|398407551|ref|XP_003855241.1| SNF2 family DNA-dependent ATPase domain-containing protein
            [Zymoseptoria tritici IPO323]
 gi|339475125|gb|EGP90217.1| SNF2 family DNA-dependent ATPase domain-containing protein
            [Zymoseptoria tritici IPO323]
          Length = 979

 Score =  247 bits (630), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 174/598 (29%), Positives = 282/598 (47%), Gaps = 92/598 (15%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            ++  L+ HQ VG+ F++E ++     +K  D G G ILA  MGLGKT Q IA L+T ++ 
Sbjct: 297  LTRALREHQRVGVSFLYECVMG----MKDFD-GEGAILADEMGLGKTLQTIALLWTLLKQ 351

Query: 780  --------VNLGL-RTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
                      +GL + ALIV PV V+ NWK+E  KW       + VF+ ++     R   
Sbjct: 352  DPAQNPAQPGIGLIKKALIVCPVTVIKNWKKEIYKWLGKT--GISVFVADN---HNRITD 406

Query: 831  LAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRA 890
              K +    + +IGY     +   K +++  +            DI++ DE H +K    
Sbjct: 407  FTKGKCYN-IMIIGYEKL--VKVQKQLQEAKI------------DIVIADEGHRLKTAAN 451

Query: 891  DTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH 950
               QA+K +   +RI L+G+P+QN+L E++ MVD V    LG    F+  F+ PI   + 
Sbjct: 452  KAAQAIKSLNTDKRIILSGTPIQNDLSEFFMMVDLVNPSVLGKYTTFKREFEGPIVASRQ 511

Query: 951  TNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKR 1010
              +T+  ++    RS  L      F+ R    ++ K LPPKT +V+  K + +Q+++Y+ 
Sbjct: 512  PGATAAALEKGEARSEELANITNMFILRRTSEILSKYLPPKTEYVVFCKPTKVQKQIYRA 571

Query: 1011 FLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
             ++   F     +  ++ +        L ++ N P +L    +KG   R           
Sbjct: 572  VIEAPVFVAAMNTPTEVLRLI----TMLKKVCNAPKLLIKKDEKGNEER----------- 616

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 1130
                         + D ++                + +   K    SGK+ +L D+L   
Sbjct: 617  -------------VADLIEH---------------IPQSLLKAPHASGKLAVLDDLLFQI 648

Query: 1131 SNMGDKSLVF-SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
                D+ +V  S    TLD+++ ++  L            G  W RLDG T  ++RQ LV
Sbjct: 649  DTKTDEKVVLVSNYTSTLDVLQDFIGLL------------GYSWLRLDGSTPVAKRQDLV 696

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            + FN     +    L+S +AG +GINL  A+R+I+ D  WNP  DLQA+ R  R GQ +P
Sbjct: 697  DTFNRSPKTKSFVFLLSAKAGGVGINLIGASRLILYDLDWNPATDLQAMARVHRDGQKRP 756

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPD 1307
               YRL+  G ++EKI++RQ++K GLA  +VD +      S+ E+  LF+   DE+ D
Sbjct: 757  CHIYRLLTQGALDEKIFQRQISKTGLAESIVDGKSAASGFSQAELRDLFKL--DESDD 812


>gi|189204870|ref|XP_001938770.1| DNA repair and recombination protein RAD26 [Pyrenophora
            tritici-repentis Pt-1C-BFP]
 gi|187985869|gb|EDU51357.1| DNA repair and recombination protein RAD26 [Pyrenophora
            tritici-repentis Pt-1C-BFP]
          Length = 1246

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 185/613 (30%), Positives = 283/613 (46%), Gaps = 113/613 (18%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
              RIP  I   L  +Q  G++++WE   Q++          G I+   MGLGKT Q I  
Sbjct: 405  GFRIPGDIYPALFDYQKTGVQWLWELYSQNV----------GGIIGDEMGLGKTIQAIGL 454

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRD 825
            +     S  L  +  ++V P  V+  W  EF +W P+    LRV +L        D  R+
Sbjct: 455  VAGLHYSKKL-TKPVIVVCPATVMKQWVNEFHRWWPA----LRVSILHTSGSGMLDTRRE 509

Query: 826  RRAELLAKWRAKGG--VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV----- 878
             R E   + R  G     L G          K  +D ++       LQ   + L+     
Sbjct: 510  DRLEQEMELRKYGDYDTTLTGAGKAAKKVLEKVKRDGHVLVTTYSGLQTYAEFLIPTEWE 569

Query: 879  ---CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
                DE H I+N     T   K+++   RI L+G+P+QNNL E + + DFV    LG+  
Sbjct: 570  CAILDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLV 629

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNVVKKDLPPKTVF 994
             FRN+F+ PI+ G + N+++ + +   Q +  L + +  + +QR  ++V   DLP K   
Sbjct: 630  NFRNQFEFPIKRGGYANASNLEFETAVQCAETLKDAVSPYLLQRFKVDVA-TDLPQKKEQ 688

Query: 995  VITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ-- 1049
            V+  KL+  QR+ Y+ FL   D+    N +      R+  F G   L +I NHP + +  
Sbjct: 689  VLFCKLTRQQRQAYEAFLASEDMKSIANGK------RQMLF-GVDFLRKICNHPDLTEHK 741

Query: 1050 -LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHE 1108
             L+K  GY               DY         N N                       
Sbjct: 742  TLSKKPGY---------------DYG--------NPN----------------------- 755

Query: 1109 HTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK 1168
                    SGKM ++ ++L++    G K+L+F+Q    LD+++ ++S+LP          
Sbjct: 756  -------RSGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFISQLP---------- 798

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
               +W R+DG T   +RQ LV+ FN   N  +   L++T+ G LG+NL  ANRVII D  
Sbjct: 799  -DINWRRMDGDTPIKDRQNLVDEFNN--NPDLHVFLLTTKVGGLGVNLTGANRVIIYDPD 855

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT 1288
            WNP+ D+QA  R+WR GQ + V  YRLM+ GT+EEKIY RQ+ K+ L  +V+   +  +T
Sbjct: 856  WNPSTDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQT 915

Query: 1289 ISKEEMLHLFEFG 1301
                ++  LF  G
Sbjct: 916  FQMSDLHDLFTLG 928


>gi|61402625|gb|AAH91795.1| LOC553504 protein, partial [Danio rerio]
          Length = 1069

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 187/617 (30%), Positives = 288/617 (46%), Gaps = 112/617 (18%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V++P +I+  L+ +Q  GI+F+++N  +S           GCIL   MGLGKT QVI FL
Sbjct: 48   VKVPYTINRYLRDYQREGIKFIYQNYAKS----------RGCILGDDMGLGKTVQVIGFL 97

Query: 774  YTAMRSVNLG--------------------LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
               ++                          +  +IV P++VL+NWK E   W       
Sbjct: 98   AAVLQKTGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDELDTW-----GH 152

Query: 814  LRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDG 873
             RV ++  V +D   EL    R +  + L  Y   R L   +     N A          
Sbjct: 153  FRVVVVHGVRKDE--ELARVQRGRCEIALTTYETLR-LCLDQ-FNSINWA---------- 198

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
               ++ DEAH IKN ++  TQA+KQ++C+ RI LTG+ LQNNL E +C++++     LGS
Sbjct: 199  --AVIVDEAHKIKNHKSKITQAMKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRCLGS 256

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
               F+NRF +PIE GQ    T   +    +    L ++L  +  R   +++   LP K  
Sbjct: 257  LGAFKNRFSDPIEKGQKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKSLISDQLPKKDD 316

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEK----------------------IRKSF 1031
             V+   L+  QR +Y+  LD    T    S+ K                      +R  +
Sbjct: 317  RVVYCSLTDFQRTVYRAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKLNADGVPVRHLY 376

Query: 1032 FAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKP-RNMNDFLQG 1090
            F+    L ++ NH  +LQ            ++D +S +   Y   I E+  R   DF + 
Sbjct: 377  FSYLAILRKVANHVALLQ------------SKDGTSKKQEKYVTTICEQVFRKFPDFTER 424

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
                 F   +  +D +         YSGKM ++  +L       DK L+FS S   LD++
Sbjct: 425  CKQAAF---EAMSDPM---------YSGKMKVMQKLLNHFIAKKDKVLLFSLSTKLLDVL 472

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E +               +G +++RLDG T+S +R K+V+ FN   ++ V   L+ST AG
Sbjct: 473  ESF------------CMAEGLEYHRLDGNTKSKDRVKIVKEFNS--SRDVNLCLVSTLAG 518

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
             LG+N   AN V++ D +WNP  DLQAI R +R GQ + V  +RL++ GT+EE IY RQV
Sbjct: 519  GLGLNFIGANVVVLFDPTWNPANDLQAIDRVYRIGQCRDVTVFRLISLGTVEEIIYLRQV 578

Query: 1271 TKEGLAARVVDRQQVHR 1287
             K+ L + V+ ++   R
Sbjct: 579  YKQQLQSSVIGQENARR 595


>gi|358058721|dbj|GAA95684.1| hypothetical protein E5Q_02341 [Mixia osmundae IAM 14324]
          Length = 2010

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 184/586 (31%), Positives = 293/586 (50%), Gaps = 100/586 (17%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  GI+FM+E ++      KS  +G GCILA  MGLGKT Q I  ++T ++     
Sbjct: 513  LRPHQKEGIQFMYECVM----GFKS--EGTGCILADEMGLGKTVQSIGLIWTLLKQTPYA 566

Query: 784  -----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKG 838
                 +  ALIV PV ++ NW +EF KW   E   + VF     + D ++ + +  ++K 
Sbjct: 567  TSGSVIGRALIVCPVTLVKNWSREFSKWLGRER--IGVF-----TADAKSNIKSFTKSKT 619

Query: 839  -GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI--LVCDEAHMIKNTRADTTQA 895
              V +IGY   R +     V+D     E C      P I  ++CDE H +K+  A TTQA
Sbjct: 620  YAVLIIGYERLRTV-----VEDL----EKC-----SPPIGVIICDEGHRLKSAGAKTTQA 665

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            L+ +  ++R+ LTG+P+QN+L E + MVDF+  G L S   F+  F+ PI   +  +++S
Sbjct: 666  LRALSAEKRVILTGTPIQNDLSELHTMVDFIIPGALDSYATFKKCFEVPILKSREPHASS 725

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
            E   +   RS  L    + FV R    V+ + LPPK  +V+ V+ + LQ RLYK+ L+  
Sbjct: 726  EVRGLGQARSDQLASIARSFVLRRTSEVIAQFLPPKQEYVLFVRPTQLQIRLYKKILETP 785

Query: 1016 GFTNDRVSNEKIRKSFFAG--------YQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
                         ++ F+G          AL ++ N PG+L    D+ +   +DAED  +
Sbjct: 786  AV-----------RAIFSGKGGNHLVLISALKKLCNSPGLLVKQLDQQH--VKDAEDEVT 832

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
            +       +  E P  ++                           ++  SGK + L ++L
Sbjct: 833  ES------IAEELPSGLD-------------------------VNDVHLSGKALALANLL 861

Query: 1128 -TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQ 1186
             ++     +K ++ S    TL+++E +  K  R G           + RLDG T    RQ
Sbjct: 862  ESIKEKTEEKVVLVSNFTQTLNILEAF-CKTRRYG-----------YCRLDGATAQKARQ 909

Query: 1187 KLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
             +VE FN    K     L+S+++G  G+NL  A+R+++ D  WNP+ DLQA+ R  R GQ
Sbjct: 910  GIVETFNRASQKAQFIFLLSSKSGGAGLNLIGASRLVLFDSDWNPSNDLQAMARIHRDGQ 969

Query: 1247 TKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 1292
             +P   YRL+A GT++EKI++RQ+ K+GLA  ++  +   +T  K+
Sbjct: 970  KRPCHIYRLLATGTLDEKIFQRQIIKQGLAGSLMQGEGSTKTSGKQ 1015


>gi|8163804|gb|AAF73858.1|AF217319_1 putative repair and recombination helicase RAD26L [Mus musculus]
          Length = 685

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 192/640 (30%), Positives = 287/640 (44%), Gaps = 123/640 (19%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   IP +I+  L+ +Q  G +F++ + I+          G GCIL   MGLGKT QVI
Sbjct: 95   EDGDSIPYTINRYLRDYQREGAQFLYRHYIE----------GRGCILGDDMGLGKTIQVI 144

Query: 771  AFLYTAM-----------------------RSVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            +FL   +                       +  +   +  LIV P++VL+NWK E   W 
Sbjct: 145  SFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW- 203

Query: 808  PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   RV +L    +D   ELL   + K  + L  Y   R            +  E  
Sbjct: 204  ----GYFRVTVLHGSKKDN--ELLRLKQRKCEIALTTYETLR------------LCLEEL 245

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            ++L+     ++ DEAH IKN +A  T+ +K VKC+ RI LTG+ LQNN+ E +C++D+  
Sbjct: 246  NSLEWSA--IIVDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTILQNNMKELWCVMDWAV 303

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
             G LGS   F+ +F +P+E+GQ   +T  ++    +  H L +++ G+  R    ++K  
Sbjct: 304  PGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQ 363

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGF------------------------TNDRVS 1023
            LP K   ++   L+  Q+ +Y+  L+                            TN R  
Sbjct: 364  LPKKEDRMVYCSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSR-- 421

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 1083
             + +R    +    L +I NH  +LQ            A  +S  +      +       
Sbjct: 422  GDTVRTLCLSYLTVLQKIANHVALLQ------------AASTSKHQETVIKRICDRVFSR 469

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 1143
              DF+Q   D  F             T  +  YSGKM +L  +L       DK L+FS S
Sbjct: 470  FPDFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHFRKQRDKVLLFSFS 517

Query: 1144 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1203
               LD+++ Y                G D+ RLDG T+S ER K+V+ FN   ++ V   
Sbjct: 518  TKLLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--SQDVNIC 563

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            L+ST AG LG+N   AN VI+ D +WNP  DLQA+ RA+R GQ + V   RL++ GT+EE
Sbjct: 564  LVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEE 623

Query: 1264 KIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
             +Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 624  IMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 663


>gi|336364885|gb|EGN93238.1| hypothetical protein SERLA73DRAFT_172150 [Serpula lacrymans var.
            lacrymans S7.3]
 gi|336377463|gb|EGO18625.1| hypothetical protein SERLADRAFT_454200 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 817

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 199/627 (31%), Positives = 305/627 (48%), Gaps = 110/627 (17%)

Query: 707  REKGEEAVRIPSSI----SAKLKAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAH 759
            ++K ++  ++P  I    +A L+ HQV G++F++        K  +G   +   GCI+A 
Sbjct: 203  KDKKQKDTKVPVVIDPRLTAVLRPHQVEGVKFLY--------KCTTGMLMENQYGCIMAD 254

Query: 760  TMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLR 815
             MGLGKT Q IA L+T ++ S + G   +   +I  P +++ NW  EF KW    L    
Sbjct: 255  EMGLGKTLQCIALLWTLLKQSPHPGKSSVEKCIIACPSSLVKNWANEFAKW----LGKDA 310

Query: 816  VFMLEDVSRDRRAELLAK---WRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREI 866
            V +L    +  +AELL K   W    G      V ++ Y   R LS   H+ + ++    
Sbjct: 311  VSILAIDGKGGKAELLEKVGRWVTALGRNITQPVMIVSYETLRTLSV--HLANCSIG--- 365

Query: 867  CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
                     +L+CDE H +KN+ + T QAL  +  +RR+ LTG+P+QN+L EY+ +++F 
Sbjct: 366  ---------LLLCDEGHRLKNSDSLTFQALNGLNVKRRVILTGTPIQNDLSEYFSLLNFA 416

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
               FLGS +EFR  F+N I  G+  N+         ++   L   +  F+ R   +++ K
Sbjct: 417  NPNFLGSKNEFRKNFENAIIRGRDANAADAVKAASEKKLKELGGLVTKFIIRRTNDLLSK 476

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA--------L 1038
             LP K   V+   LS  Q  LY+ F+         +S E   K+   G ++        L
Sbjct: 477  YLPVKYEQVVFCGLSDFQLSLYRLFI---------LSPEI--KALLRGAESQPLKAINIL 525

Query: 1039 AQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
             ++ NHP +L L             D    EN+     I E       F       G   
Sbjct: 526  KKLCNHPELLDL-----------PNDLRGSENL-----IPE------GFACAGTTTG--- 560

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
                 D   + T +  D+SGK ++L   L  + +   DK ++ S    TLDL E    KL
Sbjct: 561  ----RDRNKKQTVR-CDWSGKFLVLERFLHQIRTQTTDKIVLISNYTQTLDLFE----KL 611

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
             R  K G        ++RLDG    ++RQKLV++FN P  K     L+S++AG  GINL 
Sbjct: 612  CRSKKYG--------FFRLDGTMTITKRQKLVDQFNNPEGKEF-IFLLSSKAGGCGINLI 662

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANR+I+ D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ +K+ L++
Sbjct: 663  GANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQASKQALSS 722

Query: 1278 RVVD-RQQVHRTISKEEMLHLFEFGDD 1303
             VVD ++   R  S + +  LF F ++
Sbjct: 723  AVVDEKEDAERHFSLDSLRQLFLFNEN 749


>gi|345488256|ref|XP_001601964.2| PREDICTED: DNA repair and recombination protein RAD54B [Nasonia
            vitripennis]
          Length = 898

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 174/594 (29%), Positives = 286/594 (48%), Gaps = 97/594 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   +++ L+ HQ  GI F+++ I+       +     G ILA  MGLGKT Q I+ +
Sbjct: 298  VSVDGCLASVLRPHQREGIVFLYKCIMG-----MNSAHHKGAILADEMGLGKTLQCISLI 352

Query: 774  YTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPS-ELKPLRV---FMLEDVSRDR 826
            +T ++    G   L+  LIV+P ++  NW +EF +W  + ++ P  V     ++D ++  
Sbjct: 353  WTLLKKGPSGKPVLKRVLIVSPSSLCGNWNKEFKRWLGTMKIAPYVVEGKQKVKDFTKTP 412

Query: 827  RAELLAKWRAKGGVFLIGYTAF-RNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMI 885
            RA           V +IGY  F RN+     + + N             D+L+CDE H +
Sbjct: 413  RA----------CVMIIGYEMFVRNID---DINNLNF------------DLLICDEGHRL 447

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN+   T + L Q++C+RRI +TG+P+QN+L E+Y + +FV  G  G+  ++++ +++ I
Sbjct: 448  KNSEVKTLKFLSQLRCKRRILVTGTPVQNDLTEFYNLANFVNPGVFGTPGDYKSYYEHKI 507

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
               Q   +  ++V +  +R+  LYE+ K F+ R    ++ K LP K   V+  K +  Q 
Sbjct: 508  VASQRATADEDEVALGQERAKELYEKSKSFILRRTNTLINKYLPQKHELVVFCKPTVEQN 567

Query: 1006 RLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDS 1065
             LY    D + F    +    I  +      AL ++ NHP +                  
Sbjct: 568  NLYSLITD-YWFNRSLIDGNVIPLTVIT---ALKKVCNHPYLF----------------- 606

Query: 1066 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLD 1125
            +S+++   + V+   P N++                        +Y    YS K+ ++  
Sbjct: 607  TSEKSNILDEVLPSVPTNLSAI--------------------NTSY---SYSSKVKVVQA 643

Query: 1126 ILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSER 1185
            I        +K ++ S    TLD +E                 +G  + RLDG T ++ R
Sbjct: 644  IFQAIKRTNEKVVLVSYFTQTLDFLEKVCC------------TEGLQFCRLDGHTPAASR 691

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
             KLV+RFN   N      L+S +AG +G+NL  A+R+I+ D  WNP  D QA+ R WR G
Sbjct: 692  TKLVDRFNSKDNSFF--FLLSAKAGGVGLNLVGASRLILFDSDWNPANDAQAMARIWRDG 749

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR-TISKEEMLHLF 1298
            Q + VF YRL+  GT+EEKIY+RQ++K GL+  VVD   +    +S  E+  LF
Sbjct: 750  QKRSVFIYRLLTTGTIEEKIYQRQISKTGLSEAVVDANHISSLKLSASELKDLF 803


>gi|148684275|gb|EDL16222.1| stretch responsive protein 278, isoform CRA_a [Mus musculus]
          Length = 708

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 192/640 (30%), Positives = 287/640 (44%), Gaps = 123/640 (19%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   IP +I+  L+ +Q  G +F++ + I+          G GCIL   MGLGKT QVI
Sbjct: 118  EDGDSIPYTINRYLRDYQREGAQFLYRHYIE----------GRGCILGDDMGLGKTIQVI 167

Query: 771  AFLYTAM-----------------------RSVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            +FL   +                       +  +   +  LIV P++VL+NWK E   W 
Sbjct: 168  SFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW- 226

Query: 808  PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   RV +L    +D   ELL   + K  + L  Y   R            +  E  
Sbjct: 227  ----GYFRVTVLHGSKKDN--ELLRLKQRKCEIALTTYETLR------------LCLEEL 268

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            ++L+     ++ DEAH IKN +A  T+ +K VKC+ RI LTG+ LQNN+ E +C++D+  
Sbjct: 269  NSLEWSA--IIVDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAV 326

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
             G LGS   F+ +F +P+E+GQ   +T  ++    +  H L +++ G+  R    ++K  
Sbjct: 327  PGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQ 386

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGF------------------------TNDRVS 1023
            LP K   ++   L+  Q+ +Y+  L+                            TN R  
Sbjct: 387  LPKKEDRMVYCSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSR-- 444

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 1083
             + +R    +    L +I NH  +LQ            A  +S  +      +       
Sbjct: 445  GDTVRTLCLSYLTVLQKIANHVALLQ------------AASTSKHQETVIKRICDRVFSR 492

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 1143
              DF+Q   D  F             T  +  YSGKM +L  +L       DK L+FS S
Sbjct: 493  FPDFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHFRKQRDKVLLFSFS 540

Query: 1144 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1203
               LD+++ Y                G D+ RLDG T+S ER K+V+ FN   ++ V   
Sbjct: 541  TKLLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--SQDVNIC 586

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            L+ST AG LG+N   AN VI+ D +WNP  DLQA+ RA+R GQ + V   RL++ GT+EE
Sbjct: 587  LVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEE 646

Query: 1264 KIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
             +Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 647  IMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 686


>gi|91807128|ref|NP_075996.2| RAD26L hypothetical protein isoform 2 [Mus musculus]
 gi|172046593|sp|Q9JIM3.2|RAD26_MOUSE RecName: Full=Putative DNA repair and recombination protein
            RAD26-like
          Length = 699

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 191/640 (29%), Positives = 287/640 (44%), Gaps = 123/640 (19%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   IP +I+  L+ +Q  G +F++ + I+          G GCIL   MGLGKT QVI
Sbjct: 109  EDGDSIPYTINRYLRDYQREGAQFLYRHYIE----------GRGCILGDDMGLGKTIQVI 158

Query: 771  AFLYTAM-----------------------RSVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            +FL   +                       +  +   +  LIV P++VL+NWK E   W 
Sbjct: 159  SFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW- 217

Query: 808  PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   RV +L    +D   ELL   + K  + L  Y   R            +  E  
Sbjct: 218  ----GYFRVTVLHGSKKDN--ELLRLKQRKCEIALTTYETLR------------LCLEEL 259

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            ++L+     ++ DEAH IKN +A  T+ +K VKC+ RI LTG+ LQNN+ E +C++D+  
Sbjct: 260  NSLEWSA--IIVDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAV 317

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
             G LGS   F+ +F +P+E+GQ   +T  ++    +  H L +++ G+  R    ++K  
Sbjct: 318  PGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQ 377

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGF------------------------TNDRVS 1023
            LP K   ++   L+  Q+ +Y+  L+                            TN R  
Sbjct: 378  LPKKEDRMVYCSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSR-- 435

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 1083
             + +R    +    L ++ NH  +LQ            A  +S  +      +       
Sbjct: 436  GDTVRTLCLSYLTVLQKVANHVALLQ------------AASTSKHQETVIKRICDRVFSR 483

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 1143
              DF+Q   D  F             T  +  YSGKM +L  +L       DK L+FS S
Sbjct: 484  FPDFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHFRKQRDKVLLFSFS 531

Query: 1144 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1203
               LD+++ Y                G D+ RLDG T+S ER K+V+ FN   ++ V   
Sbjct: 532  TKLLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--SQDVNIC 577

Query: 1204 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 1263
            L+ST AG LG+N   AN VI+ D +WNP  DLQA+ RA+R GQ + V   RL++ GT+EE
Sbjct: 578  LVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEE 637

Query: 1264 KIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
             +Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 638  IMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 677


>gi|395819328|ref|XP_003783046.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Otolemur garnettii]
          Length = 702

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 193/642 (30%), Positives = 289/642 (45%), Gaps = 126/642 (19%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   IP +I+  L+ +Q  G +F++ + I          KG GCIL   MGLGKT QVI
Sbjct: 111  EDGDSIPYTINRYLRDYQREGAQFLYGHYI----------KGRGCILGDDMGLGKTVQVI 160

Query: 771  AFLYTAM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKW 806
            +FL   +                  RS+      +   +  LIV P++VL+NWK E   W
Sbjct: 161  SFLAAVLHKKGTREDIENNMPEFLLRSMKKEPPSSTARKMFLIVAPLSVLYNWKDELDTW 220

Query: 807  RPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
                    RV +L    +D   EL+   + K  + L  Y   R            +  + 
Sbjct: 221  -----GYFRVTVLHGNKKDN--ELIRIKQRKCEIALTTYETLR------------LCLDE 261

Query: 867  CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
             ++L+     ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+ 
Sbjct: 262  LNSLEWSG--VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWA 319

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
              G LGS   F+ +F +P+E+GQ   +T  ++    +    L +++ G+  R    ++K 
Sbjct: 320  VPGLLGSRTHFKKQFSDPVEHGQRHTATKRELATGRKAMRRLAKKMSGWFLRRTKTLIKD 379

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSN 1024
             LP K   ++   L+  Q+ +Y+  L+    T                            
Sbjct: 380  QLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILHSSEPCTCSSGRKRRNCCYKTNSQG 439

Query: 1025 EKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNV---VIGEKP 1081
            E ++  +F+    L ++ NH  +LQ            A  S   E +   +   V    P
Sbjct: 440  ETVKTLYFSYLAVLQKVANHVALLQ-----------SASTSKQQETLIKRICDQVFSRFP 488

Query: 1082 RNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFS 1141
                DF+Q   D  F             T  +  YSGKM +L  +L  C    DK L+FS
Sbjct: 489  ----DFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFS 532

Query: 1142 QSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVK 1201
             S   LD+++ Y                G D+ RLDG T+S ER K+V+ FN    + V 
Sbjct: 533  FSTKLLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVN 578

Query: 1202 CTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTM 1261
              L+ST AG LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+
Sbjct: 579  ICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLVSLGTV 638

Query: 1262 EEKIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            EE +Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 639  EEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 680


>gi|164425263|ref|XP_963002.2| hypothetical protein NCU06190 [Neurospora crassa OR74A]
 gi|157070856|gb|EAA33766.2| predicted protein [Neurospora crassa OR74A]
          Length = 1893

 Score =  246 bits (629), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 185/600 (30%), Positives = 283/600 (47%), Gaps = 93/600 (15%)

Query: 702  IVNVVREKGE-EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHT 760
            I+N  +E  +   + +   I  ++K HQ+ G+RFMW+ I+     V+S  +  GC+LAHT
Sbjct: 956  IINETKESDDLPLIYVHEEIGGRIKDHQIDGVRFMWDQIV-----VESNSRQ-GCLLAHT 1009

Query: 761  MGLGKTFQVIAFLY-------------TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            MGLGKT QVI  L               A    +L +   LI+ P  ++ NW  E  KW 
Sbjct: 1010 MGLGKTMQVITLLVAIAEASQSDDPRVVAQIPKDLRVGRPLILCPSGLVENWIDEICKWA 1069

Query: 808  PSE-LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
            P + L  +       V    R  L+ +W    GV ++GY  FR+L  G    + N+A E+
Sbjct: 1070 PKDILGTITKIDASTVPPSERVLLIKEWARSRGVLVMGYELFRSLVSGN---EDNVA-EL 1125

Query: 867  CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
             H+    P I++CDEAH  KN  +     ++      RIA TGSPL  N+M+YY M+++V
Sbjct: 1126 LHS---SPSIVICDEAHRFKNKTSKLYAVVQDFHTMSRIATTGSPLTRNVMDYYSMINWV 1182

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
               +L    EF  ++  PI  G H +ST    ++  +R  IL   +   V R D+ V+  
Sbjct: 1183 APNYLSDVGEFNQKYAEPISLGLHADSTDAQKRLARERLQILKAIVAPKVNRKDIQVLVD 1242

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA-LAQIWNHP 1045
            +LP K  F++T++++ +QR  Y+ +L+          N+  R +   G  A L  +  HP
Sbjct: 1243 ELPQKREFILTIQMTKVQRDAYQEYLET---AQRNKGNDLYRTACVWGLIASLKLLLAHP 1299

Query: 1046 GILQLTKDKGYPSREDAEDSSSDENMDYN-VVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
             I +               S  +E +  N  ++  K R  ND            +D  +D
Sbjct: 1300 KIFR---------------SKMEERLSTNPALVKGKQRITND------------EDPESD 1332

Query: 1105 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQG 1164
             + E     LD S     L ++L   S  G         I  +DL  F L K+       
Sbjct: 1333 EVDE----PLDLSRDT--LRNVLAKVSIRG---------IDDIDL--FKLKKI------- 1368

Query: 1165 KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
                   ++ +LDG+T  S+RQ  V+ FN      +   LISTRAG +G+N+  ANRV++
Sbjct: 1369 -------NYRKLDGKTPVSQRQAAVKEFNA--VDSLDVYLISTRAGGVGLNIPGANRVVL 1419

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
             D  + P  + QA+ RA+R GQ K VF Y L   GT E  I+   + K  L+ RVVD+++
Sbjct: 1420 FDFGFTPAEEQQAVGRAYRIGQEKKVFVYHLKVGGTYETAIHNLAIFKRQLSERVVDKKK 1479


>gi|440478876|gb|ELQ59674.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae P131]
          Length = 843

 Score =  246 bits (629), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 188/640 (29%), Positives = 306/640 (47%), Gaps = 104/640 (16%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGE-EAVRIPSSISAKL----KAHQVVGIRFM 735
            LD  L   +  E+LG          +++K E E  R+P  I  +L    + HQ+ G++FM
Sbjct: 216  LDAPLVHKSLAEILG----------IKKKVEGEHPRVPVVIDPRLAKVLRPHQIEGVKFM 265

Query: 736  WENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR----SVNLGLRTALIVT 791
            +  +   I      +K  GCI+A  MGLGKT Q I  L+T ++    +    ++ A++  
Sbjct: 266  YRCVTGMI-----DEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPAIQKAIVAC 320

Query: 792  PVNVLHNWKQEFMKWRPSE-LKPLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYT 846
            P +++ NW  E +KW  ++ + P  +      E+++R  R   ++  RA    V ++ Y 
Sbjct: 321  PSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAISSGRAVTRPVIIVSYE 380

Query: 847  AFR-NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRI 905
              R N+   KH K                 +++CDE H +KN  + T  AL  +   RR+
Sbjct: 381  TLRLNVEELKHTKI---------------GLMLCDEGHRLKNGDSQTFTALNNLNVSRRV 425

Query: 906  ALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRS 965
             L+G+P+QN+L EY+ ++ F     LG+  EFR RF+ PI  G+  +++ ++    ++  
Sbjct: 426  ILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERVKGDECL 485

Query: 966  HILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRV 1022
              L   +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   D+      + 
Sbjct: 486  KELLALVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGKG 545

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPR 1082
            S              L ++ NHP +L L+        +D   S +    DY   + ++ R
Sbjct: 546  SQP------LKAIGILKKLCNHPDLLNLS--------DDLPGSEAHWPSDY---VPKESR 588

Query: 1083 NMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFS 1141
              +  +          K W              YSGKM +L  +L  + ++  DK ++ S
Sbjct: 589  GRDREI----------KPW--------------YSGKMQVLDRMLARIRADTNDKIVLIS 624

Query: 1142 QSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVK 1201
                TLDL E    +L R    G L        RLDG    ++RQKLV++FN+P      
Sbjct: 625  NYTSTLDLFE----RLCRNRGYGSL--------RLDGTMNVTKRQKLVDKFNDPEGSEF- 671

Query: 1202 CTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTM 1261
              L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A G++
Sbjct: 672  VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSI 731

Query: 1262 EEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEF 1300
            EEKI++RQ  K+ L++ VVD  + V R  S + +  LF++
Sbjct: 732  EEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLKELFQY 771


>gi|345785206|ref|XP_533502.3| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Canis lupus familiaris]
          Length = 800

 Score =  246 bits (629), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 191/637 (29%), Positives = 288/637 (45%), Gaps = 126/637 (19%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G +F++ + IQ          G GCIL   MGLGKT QVI+FL  
Sbjct: 214  IPYTINRYLRDYQREGAQFLYAHFIQ----------GKGCILGDDMGLGKTVQVISFLAA 263

Query: 776  AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                  RS+      +   +  LIV P++VL+NW+ E   W     
Sbjct: 264  VLHKKGTREDIENNMPEFLLRSMKKEPPSSTAKKMFLIVAPLSVLYNWRDELDTW----- 318

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  + L  Y   R            +  +  ++L+
Sbjct: 319  GYFRVTILHGNKKDN--ELVRVKQRKCEIALTTYETLR------------LCLDELNSLE 364

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                I+  DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 365  WSAVIV--DEAHKIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 422

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS   F+ +F +P+E+GQ   +T  ++    +    L + + G+  R    ++K  LP K
Sbjct: 423  GSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKMMSGWFLRRTKTLIKDQLPKK 482

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 483  EDRMVYCSLTDFQKAVYQTVLETKDVTLILQSSEPCSCSSGRKRRNCCYKTNSHGETVKT 542

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNV---VIGEKPRNMND 1086
             +F+    L ++ NH  +LQ            A  S   E +   +   V  + P    D
Sbjct: 543  LYFSYLAVLQKVANHVALLQ-----------SASTSKQQETLIKRICDQVFSKFP----D 587

Query: 1087 FLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPT 1146
            F+Q   D  F             T  +  YSGKM +L  +L  C    DK L+FS S   
Sbjct: 588  FVQKSKDASF------------ETLSDPKYSGKMKVLQQLLNHCRKNKDKILLFSFSTKL 635

Query: 1147 LDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIS 1206
            LD+++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+S
Sbjct: 636  LDVLQQY------------CMAAGFDYRRLDGSTKSEERIKIVKEFNS--TQDVNICLVS 681

Query: 1207 TRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIY 1266
            T AG +G+N   AN V++ D +WNP  DLQAI RA+R GQ + V  +RL++ GT+EE +Y
Sbjct: 682  TMAGGVGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMY 741

Query: 1267 KRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
             RQV K+ L   VV  +   R       SKE    LF
Sbjct: 742  LRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 778


>gi|449702030|gb|EMD42742.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
            histolytica KU27]
          Length = 884

 Score =  246 bits (628), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 174/592 (29%), Positives = 276/592 (46%), Gaps = 87/592 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+  Y   V   K E AV +   +  KL+ HQ  G++FM++ ++     +K G KG GC
Sbjct: 246  DAVVLYQPTVTSRK-EVAVVVDPLLGLKLRPHQKAGVKFMYDCVMG----LKQGFKGNGC 300

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELK 812
            ILA  MGLGKT Q +  ++T +R    G    +  ++V P +++ NW+ EF KW      
Sbjct: 301  ILADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGDAAP 360

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
             +          D+    +    A+  + +I Y   R      H+      +        
Sbjct: 361  RVVGVSCSGAKTDQAISDMDFGYAE--IMVISYDQLRI-----HIDKIEKIK-------- 405

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
            G  +L+CDE H +KN    ++QA+ +V  +RR+ L+G+P+QN L E+Y MV FV    LG
Sbjct: 406  GWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNPDVLG 465

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            S   F+  ++ PI   +  + T E+    NQRS  L    K F+ R    V +K LPPK 
Sbjct: 466  SLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTAKVNQKYLPPKV 525

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
              V+   L+PLQ+++Y    +L    N     ++ +   F    AL ++ NHP ++Q   
Sbjct: 526  QHVVFCSLTPLQKKIYTALCNLK---NKPKGKDEKKSCQFQILTALKKVSNHPWLIQ--- 579

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKND--DGFFQKDWWNDLLHEHT 1110
                                             DF++   +  DG   K    D L    
Sbjct: 580  ---------------------------------DFVKTFPEVLDGILPK---GDALW--- 600

Query: 1111 YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
              +++ SGK   L  +L       +K ++ S    TL+ I  +  K   P          
Sbjct: 601  --DMELSGKTAFLAKLLAFLRKHKEKIVIVSNYTETLNFIAHHCKKCGYP---------- 648

Query: 1171 KDWYRLDGRTESSERQKLVERFNEP-LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
              + +LDG   +++R ++V RFN P L++ +   L+S++AG  G+NL     +++ D  W
Sbjct: 649  --YIQLDGSVAATKRTQMVNRFNNPELDEFI--FLLSSKAGGCGLNLVGGANLVMFDPDW 704

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            NP  D QA+ R WR GQ K    YR ++ GT+EEK+Y+RQ+ K  LA +VV+
Sbjct: 705  NPANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIKKLELAGKVVE 756


>gi|351713467|gb|EHB16386.1| DNA repair and recombination protein RAD54B, partial [Heterocephalus
            glaber]
          Length = 903

 Score =  246 bits (628), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 185/604 (30%), Positives = 297/604 (49%), Gaps = 100/604 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  M LGKT Q I+ +
Sbjct: 286  VVIDPHVVHHLRPHQKEGIIFLYECVM-GMRM----NGRYGAILADEMCLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    +R +LIVTP ++++NW++EF KW  +E   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIRKSLIVTPGSLVNNWRKEFKKWLGTER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFIK-SVFYSVLIISYEMLLRSLEQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGVLGSLASYRKIYEEPIVMS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    V+ K LPPK   V+  + + LQ  LY
Sbjct: 500  REPSASEEEKELGERRAAELTRVTGLFILRRTQEVINKYLPPKIENVLFCRPATLQIELY 559

Query: 1009 KRFLDLHGFTNDRVSNEKIRKSFFAGYQ---------ALAQIWNHPGIL-QLTKDKGYPS 1058
            K+ L+          ++ IR       +         AL ++ NHP +L    K K   S
Sbjct: 560  KKLLN----------SQAIRFCLQGSLENSPHLICIGALKKLCNHPCLLFNSIKGKDCSS 609

Query: 1059 REDA--EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
              D   E S  +E  DYN ++                  F +KD          Y +L  
Sbjct: 610  TCDGNEEKSLYEEKTDYNPLV------------------FMEKD----------YSKLQV 641

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
              K++ ++  L       +K ++ S    TL+++            Q    + G  + RL
Sbjct: 642  LAKLLAVIHEL----RPTEKVVLVSHYTQTLNIL------------QDVCKRYGYAYARL 685

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG+T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+Q
Sbjct: 686  DGQTPISQRQQIVDNFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQ 744

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEM 1294
            A+ R WR GQ   V  YRL+  GT+EEKIY+RQ++K+ L+  VVD  ++  H   S EE+
Sbjct: 745  AMSRVWRDGQKHAVHIYRLLTTGTIEEKIYQRQISKQALSGAVVDLTKISEHIQFSVEEL 804

Query: 1295 LHLF 1298
             +LF
Sbjct: 805  KNLF 808


>gi|392567178|gb|EIW60353.1| DNA repair protein SNF2 family [Trametes versicolor FP-101664 SS1]
          Length = 817

 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 191/624 (30%), Positives = 301/624 (48%), Gaps = 105/624 (16%)

Query: 707  REKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            ++K   A ++P  I  +L    + HQV G++F++      +      +   GCI+A  MG
Sbjct: 204  KDKKRHAHKVPVVIDPRLTKVLRPHQVEGVKFLYRCTTGMVV-----ENQYGCIMADEMG 258

Query: 763  LGKTFQVIAFLYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFM 818
            LGKT Q IA L+T ++ S + G  T    +I  P +++ NW  E +KW    L    +  
Sbjct: 259  LGKTLQCIALLWTLLKQSPHAGRPTIEKCIIACPSSLVKNWANELVKW----LGKDAISA 314

Query: 819  LEDVSRDRRAELL---AKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHA 869
            L    +  +AE+L   A+W A  G      V ++ Y   R LS   H+ + ++       
Sbjct: 315  LAIDGKGGKAEMLEKVARWVASCGRNVSQPVMIVSYETLRTLSV--HLANCSIG------ 366

Query: 870  LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
                  +L+CDE H +KN+ + T QAL  +  +RR+ L+G+P+QN+L EY+ +++F    
Sbjct: 367  ------LLLCDEGHRLKNSESLTFQALNGLNVKRRVILSGTPIQNDLSEYFSLLNFANPN 420

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP 989
            FLGS ++FR  F+N I  G+  ++T        ++   L   +  F+ R   +++ K LP
Sbjct: 421  FLGSKNDFRKNFENAIIRGRDADATDAAKSECEKKLKELGALVAKFIIRRTNDLLSKYLP 480

Query: 990  PKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA--------LAQI 1041
             K   V+  KLS  Q  LY+ F          +S+ +I ++   G ++        L ++
Sbjct: 481  VKYEQVVFCKLSDFQLSLYRLF----------ISSPEI-QALLRGAESQPLKAINILKKL 529

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NHP +L L  D         E    +          +K RN     QG N         
Sbjct: 530  CNHPELLDLPGD-----LRGCEKLLPEGYAGAGATGRDKGRN-----QGVN--------- 570

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                         ++ GK ++L   L  + +   DK ++ S    TLDL E    KL R 
Sbjct: 571  ------------CEWGGKFLVLERFLHRIHTETNDKIVLISNYTQTLDLFE----KLCRS 614

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
             K G         +RLDG    ++RQKLV+ FN+P N +    L+S++AG  GINL  AN
Sbjct: 615  KKYGH--------FRLDGTMTINKRQKLVDSFNDP-NGKEFIFLLSSKAGGCGINLIGAN 665

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+I+ D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K+ L++ VV
Sbjct: 666  RLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQALSSAVV 725

Query: 1281 D-RQQVHRTISKEEMLHLFEFGDD 1303
            D ++   R  S + +  LF F ++
Sbjct: 726  DEKEDAERHFSIDALRKLFLFNEN 749


>gi|336467451|gb|EGO55615.1| hypothetical protein NEUTE1DRAFT_86106 [Neurospora tetrasperma FGSC
            2508]
 gi|350287905|gb|EGZ69141.1| hypothetical protein NEUTE2DRAFT_115349 [Neurospora tetrasperma FGSC
            2509]
          Length = 835

 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 186/619 (30%), Positives = 298/619 (48%), Gaps = 95/619 (15%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++   E  R+P  I  +L    + HQ+ G+RFM+  +   I      +K  GCI+
Sbjct: 199  ILGIKKKVEGEHPRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMI-----DEKANGCIM 253

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LK 812
            A  MGLGKT Q I  L+T ++ S + G   ++ A++  P +++ NW  E +KW  ++ + 
Sbjct: 254  ADEMGLGKTLQCITLLWTLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAIT 313

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      E+++R  R   +A  R+    V ++ Y   R N+                
Sbjct: 314  PFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVD--------------- 358

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              L+  P  +++CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F 
Sbjct: 359  -ELKGTPIGLMLCDEGHRLKNGDSQTFSALNSLNVSRRVILSGTPIQNDLSEYFALISFA 417

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
                LG+  EFR RF+ PI  G+  +++  + K  ++    L   +  F+ R   +++ K
Sbjct: 418  NPDLLGTRLEFRKRFEIPILRGRDADASEAERKRGDECLVELLAIVNKFIIRRTNDILSK 477

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
             LP K   V+   L+P Q  LY  F+   D+      + S              L ++ N
Sbjct: 478  YLPVKYEHVVFCNLAPFQLDLYNYFVASPDIQALLRGKGSQP------LKAINILKKLCN 531

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP +L L+ D     +   ED    E                   +G++ D    K W  
Sbjct: 532  HPDLLDLSADLPGCEQYWPEDYVPKEA------------------RGRDRD---VKPW-- 568

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
                        YSGKM +L  +L  + ++  DK ++ S    TLDL E    +L R  +
Sbjct: 569  ------------YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFE----RLCRNRQ 612

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
             G L        RLDG    ++RQKLV++FN+P        L+S++AG  G+NL  ANR+
Sbjct: 613  YGCL--------RLDGTMNVNKRQKLVDKFNDPEGDEF-VFLLSSKAGGCGLNLIGANRL 663

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            ++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD 
Sbjct: 664  VLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDS 723

Query: 1283 -QQVHRTISKEEMLHLFEF 1300
             + V R  S + +  LF +
Sbjct: 724  AEDVERHFSLDSLRELFTY 742


>gi|67475316|ref|XP_653352.1| DNA repair protein [Entamoeba histolytica HM-1:IMSS]
 gi|56470295|gb|EAL47966.1| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 884

 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 174/592 (29%), Positives = 276/592 (46%), Gaps = 87/592 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+  Y   V   K E AV +   +  KL+ HQ  G++FM++ ++     +K G KG GC
Sbjct: 246  DAVVLYQPTVTSRK-EVAVVVDPLLGLKLRPHQKAGVKFMYDCVMG----LKQGFKGNGC 300

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELK 812
            ILA  MGLGKT Q +  ++T +R    G    +  ++V P +++ NW+ EF KW      
Sbjct: 301  ILADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGDAAP 360

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
             +          D+    +    A+  + +I Y   R      H+      +        
Sbjct: 361  RVVGVSCSGAKTDQAISDMDFGYAE--IMVISYDQLRI-----HIDKIEKIK-------- 405

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
            G  +L+CDE H +KN    ++QA+ +V  +RR+ L+G+P+QN L E+Y MV FV    LG
Sbjct: 406  GWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNPDVLG 465

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            S   F+  ++ PI   +  + T E+    NQRS  L    K F+ R    V +K LPPK 
Sbjct: 466  SLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTSKVNQKYLPPKV 525

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
              V+   L+PLQ+++Y    +L    N     ++ +   F    AL ++ NHP ++Q   
Sbjct: 526  QHVVFCSLTPLQKKIYTALCNLK---NKPKGKDEKKSCQFQILTALKKVSNHPWLIQ--- 579

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKND--DGFFQKDWWNDLLHEHT 1110
                                             DF++   +  DG   K    D L    
Sbjct: 580  ---------------------------------DFVKTFPEVLDGILPK---GDALW--- 600

Query: 1111 YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
              +++ SGK   L  +L       +K ++ S    TL+ I  +  K   P          
Sbjct: 601  --DMELSGKTAFLAKLLAFLRKHKEKIVIVSNYTETLNFIAHHCKKCGYP---------- 648

Query: 1171 KDWYRLDGRTESSERQKLVERFNEP-LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
              + +LDG   +++R ++V RFN P L++ +   L+S++AG  G+NL     +++ D  W
Sbjct: 649  --YIQLDGSVAATKRTQMVNRFNNPELDEFI--FLLSSKAGGCGLNLVGGANLVMFDPDW 704

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            NP  D QA+ R WR GQ K    YR ++ GT+EEK+Y+RQ+ K  LA +VV+
Sbjct: 705  NPANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIKKLELAGKVVE 756


>gi|367032442|ref|XP_003665504.1| hypothetical protein MYCTH_2309353 [Myceliophthora thermophila ATCC
            42464]
 gi|347012775|gb|AEO60259.1| hypothetical protein MYCTH_2309353 [Myceliophthora thermophila ATCC
            42464]
          Length = 804

 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 188/623 (30%), Positives = 298/623 (47%), Gaps = 89/623 (14%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + +    E  R+P  I  +L    + HQ+ G++FM+  +   I      +K  GCI+
Sbjct: 189  ILGIKKRVQGEHPRVPVVIDPRLAKVLRPHQIDGVKFMYRCVTGMI-----DEKAHGCIM 243

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q I  L+T ++ S   G   ++ A++  P +++ NW  E  KW  ++   
Sbjct: 244  ADEMGLGKTLQCITLLWTLLKQSPEAGKPTIQKAIVACPSSLVRNWANELTKWLGADA-- 301

Query: 814  LRVFMLE-DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
            +  F ++   S++     L +W    G         R+++    +      R     L++
Sbjct: 302  INPFAIDGKASKEELTRQLRQWAISTG---------RSITRPVIIVSYETLRLNVEELRN 352

Query: 873  GP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
             P  +++CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ +++F     L
Sbjct: 353  TPIGLMLCDEGHRLKNGDSQTFNALNSLNVSRRVILSGTPIQNDLSEYFALINFANPDLL 412

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG----FVQRMDMNVVKKD 987
            G+  EFR RF+ PI  G+  +++  +     QR      +L G    F+ R   +++ K 
Sbjct: 413  GTRLEFRKRFELPILRGRDADASEAE----RQRGDECLAELLGIVNKFIIRRTNDILSKY 468

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGFTN-DRVSNEKIRKSFFAGYQALAQIWNHPG 1046
            LP K   V+  KL+P Q  LY  F+   G     R    +  K+       L ++ NHP 
Sbjct: 469  LPVKYEHVVFCKLAPFQLALYNYFITSPGIQALLRGKGSQPLKAI----GILKKLCNHPD 524

Query: 1047 ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 1106
            +L L  D     +   ED    E                   +G++ D    + W     
Sbjct: 525  LLDLAADLPGCEQFWPEDYVPKEA------------------RGRDRD---IRPW----- 558

Query: 1107 HEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK 1165
                     YSGKM +L  +L  + ++  DK ++ S    TLDL E    +L R      
Sbjct: 559  ---------YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFE----RLCR------ 599

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
               +G    RLDG    ++RQKLV++FN+P N      L+S++AG  G+NL  ANR+++ 
Sbjct: 600  --SRGYGCLRLDGAMNVNKRQKLVDKFNDP-NGDEFVFLLSSKAGGCGLNLIGANRLVLF 656

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQ 1284
            D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  + 
Sbjct: 657  DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAED 716

Query: 1285 VHRTISKEEMLHLFEFGDDENPD 1307
            V R  S + +  LF+F  D   D
Sbjct: 717  VERHFSLDSLRELFQFRGDTRSD 739


>gi|398396748|ref|XP_003851832.1| DNA repair protein, SNF2 family [Zymoseptoria tritici IPO323]
 gi|339471712|gb|EGP86808.1| DNA repair protein, SNF2 family [Zymoseptoria tritici IPO323]
          Length = 809

 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 182/616 (29%), Positives = 288/616 (46%), Gaps = 92/616 (14%)

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E+ +  V I   ++  L+ HQV G++FM+      I          GCI+A  MGLGKT 
Sbjct: 201  ERPKVPVVIDPRLAKVLRPHQVEGVKFMYRCTTGLIDA-----NAEGCIMADEMGLGKTL 255

Query: 768  QVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDV 822
            Q I  ++T ++ S + G   ++  +I  P +++ NW  E +KW  P  + P  V      
Sbjct: 256  QCITLMWTLLKQSPDAGKSTIQKCVIACPSSLVRNWANELIKWLGPDAINPFAVD--GKA 313

Query: 823  SRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI 876
            S++   + +  W +  G      V ++ Y   R                    L+    +
Sbjct: 314  SKEELTQQMRSWASATGRAVTRPVLIVSYETLR---------------LYVDELRTPIGL 358

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            ++CDE H +KN  + T +AL ++   +R+ L+G+P+QN+L EY+ ++ F   G+LG+  E
Sbjct: 359  MLCDEGHRLKNGESQTFEALNRLNVSKRVILSGTPIQNDLSEYFALLTFANPGYLGTRLE 418

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            FR +F+ PI  G+  + T  D +  N+R   L E +  F+ R   +++ K LP K   V+
Sbjct: 419  FRKKFEIPILRGRDASGTEADQQKGNERLKELLELVNKFIIRRTNDILSKYLPVKYEHVV 478

Query: 997  TVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD 1053
               L+P Q  LY  F+   ++      + S              L ++ NHP +L L  D
Sbjct: 479  FCNLAPFQLDLYNYFIKSPEIQSLLRGKGSQP------LKAIGLLKKLCNHPDLLNLPDD 532

Query: 1054 KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE 1113
                     ED    +                   +G++ D    K W            
Sbjct: 533  LPGCESHFPEDFVPKDA------------------RGRDRD---VKPW------------ 559

Query: 1114 LDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
              YSGKM +L  +L  +  +  DK ++ S    TLD+ E    KL R    G L      
Sbjct: 560  --YSGKMQVLDRMLARIRHDTNDKIVLISNYTQTLDVFE----KLCRNRSYGCL------ 607

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
              RLDG    ++RQKLV++FN P  +     L+S++AG  G+NL  ANR+++ D  WNP 
Sbjct: 608  --RLDGTMAVNKRQKLVDKFNNPDGEEF-VFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 664

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISK 1291
             D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD  + V R  S 
Sbjct: 665  ADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSL 724

Query: 1292 EEMLHLFEFGDDENPD 1307
            + +  LF++  +   D
Sbjct: 725  DSLRELFQYRPNTTSD 740


>gi|190347304|gb|EDK39551.2| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1117

 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 181/618 (29%), Positives = 286/618 (46%), Gaps = 109/618 (17%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            R+P  I   L  +Q   ++++WE   Q            G I+   MGLGKT QV++F+ 
Sbjct: 311  RLPGDIYPSLFQYQRTCVQWLWELYSQKT----------GGIIGDEMGLGKTIQVVSFI- 359

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV-SRDRRAELLAK 833
              +    L  +  ++V P  V+  W  EF  W P    PLR  +L  + S   ++ L ++
Sbjct: 360  AGLHYSGLLDKPVIVVVPATVMMQWVNEFHTWWP----PLRCAILHSIGSGMSKSALTSE 415

Query: 834  WRAKGGV----FLIGYTAF----RNLSFGKHVKDRNMAREIC-------------HALQD 872
             + +  +    F +    F    + LS  K++ DR +++                + L  
Sbjct: 416  EKIENMMANDDFDLNEDKFLAQQKGLSNAKNIVDRVVSKGHVLITTYVGLRVYSKYILPH 475

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                 V DE H I+N  +  T   KQ+K   RI L+G+P+QNNL+E + + DFV  G LG
Sbjct: 476  QWGYAVLDEGHKIRNPNSHITLTCKQLKTHNRIILSGTPIQNNLIELWSLFDFVFPGRLG 535

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            +   F  +F  PI  G + N+++  V+   + + +L + +  ++ R   + V +DLP K 
Sbjct: 536  TLPVFEQQFSIPINMGGYANASNVQVQTGYKCAVVLRDLISPYLLRRLKSDVAQDLPKKE 595

Query: 993  VFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ 1049
              V+ VKL+  Q+ +Y++FL   DLH          K +++   G   L +I NHP ++ 
Sbjct: 596  EMVLFVKLTQYQQDMYEKFLSSEDLHAIL-------KGKRNMLTGVDTLRKICNHPDLVD 648

Query: 1050 ---LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 1106
               L + KG                 YN  I  K                          
Sbjct: 649  RELLLRKKG-----------------YNYGIPNK-------------------------- 665

Query: 1107 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1166
                      SGKM++L  +L +  + G ++L+F Q+   LD++E  L  L R     + 
Sbjct: 666  ----------SGKMLVLKGLLQLWQSQGHRTLLFCQTKQMLDILEKLLVNLTRISDGTEY 715

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
            +    ++ R+DG T  S+RQ LV+ FN   N      L++T+ G LG+NL  A+RVII D
Sbjct: 716  F----NYMRMDGSTPISKRQGLVDMFNN--NTNYDVFLLTTKVGGLGVNLTGADRVIIYD 769

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 1286
              WNP+ D+QA  RAWR GQ + +  YRLM  GT+EEKIY RQ+ K  L  +++   +  
Sbjct: 770  PDWNPSTDIQARERAWRLGQKRDIVIYRLMTAGTIEEKIYHRQIFKTFLTNKILKDPKQR 829

Query: 1287 RTISKEEMLHLFEFGDDE 1304
            R     ++  LF  GD E
Sbjct: 830  RFFKVNDLHDLFTLGDPE 847


>gi|332024911|gb|EGI65099.1| DNA repair and recombination protein RAD54-like protein [Acromyrmex
            echinatior]
          Length = 681

 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 180/622 (28%), Positives = 296/622 (47%), Gaps = 90/622 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---V 780
            L+ HQ  G++FM+E +       K  +   GCI+A  MGLGKT Q I  L+T ++     
Sbjct: 89   LRPHQREGVKFMYECVTG-----KRIENAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 143

Query: 781  NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW--RAKG 838
               +  A+IV P +++ NW  E  KW  + +  L +   +    D +     K   R   
Sbjct: 144  KPLIEKAVIVAPSSLVKNWYNEINKWLNNMVNTLAIDGGKKADIDTQLIRFMKTYGRCVT 203

Query: 839  GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQ 898
             + +I Y  FR            +   + H  QD   +++CDE H +KN+   T Q+L  
Sbjct: 204  PILIISYETFR------------LHAHVLH--QDEVGLVLCDEGHRLKNSENQTYQSLMG 249

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            +K +RR+ L+G+P+QN+L+EY+ +V FV +G LG++ EFR +++ PI  GQ   +T  + 
Sbjct: 250  LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKYETPILRGQDAAATDAER 309

Query: 959  KIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT 1018
             +  +R   L   +   + R    ++ K LP K   V+ +K+  LQ +LYK F+      
Sbjct: 310  TVAQERLSDLVSIVNKCLIRRTSALLSKYLPLKHELVVCIKMGELQTQLYKNFIQSDSIK 369

Query: 1019 NDRVSNEKIRK----SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 1074
                 N+  +K    S  A    L ++ NHP    L  DK     +  E ++S    +Y+
Sbjct: 370  RSMEENDNPKKTGSLSALAAITLLKKLCNHP---DLIYDKIKEKADGLEKAASLLPPNYS 426

Query: 1075 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLDIL-TMCS 1131
                                                 KEL  + SGK+++L  +L ++ +
Sbjct: 427  A------------------------------------KELMPELSGKLMVLDCLLASIKT 450

Query: 1132 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 1191
               DK ++ S    TLDL E    KL          K+  ++ RLDG     +R K+V+ 
Sbjct: 451  TTNDKIVLVSNYTQTLDLFE----KL--------CHKRSYNYVRLDGTMTIKKRAKVVDN 498

Query: 1192 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1251
            FN   +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ KP F
Sbjct: 499  FNSDSSNDF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 557

Query: 1252 AYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLFEFGDDENPDPLT 1310
             YR ++ GT+EEKI++RQ  K+ L++ VVD++  V R  +  ++  LF+  ++   D   
Sbjct: 558  VYRFLSTGTIEEKIFQRQAHKKALSSTVVDQEDDVARHFTINDLRDLFKLEENTVSDTHA 617

Query: 1311 ------AVSKENGQGSSQNTNC 1326
                   ++    +G S+ ++C
Sbjct: 618  KFKCKRCINGIEAKGPSEQSDC 639


>gi|150864673|ref|XP_001383607.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054]
 gi|149385929|gb|ABN65578.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054]
          Length = 1067

 Score =  246 bits (628), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 182/626 (29%), Positives = 288/626 (46%), Gaps = 130/626 (20%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            ++P  I   L  +Q   ++++WE   Q            G I+   MGLGKT QVI+F+ 
Sbjct: 270  KLPGDIYPSLFDYQKTCVQWLWELYSQKT----------GGIIGDEMGLGKTIQVISFV- 318

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV------------ 822
              +    L  +  L+V P  VL+ W  EF +W P    PLR  +L  +            
Sbjct: 319  AGLHYSGLLDKPVLVVVPATVLNQWVNEFHRWWP----PLRCIILHSIGSGMGKSAVRSE 374

Query: 823  -----------------------SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKD 859
                                   S+    E++ +   KG V +  Y   R   + KH+  
Sbjct: 375  EKLEEFLENSDPTQSKNSLRGINSQINAKEIVDRVMEKGHVLVTTYVGLR--IYSKHI-- 430

Query: 860  RNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 919
              + RE  +        +V DE H I+N  +D +   KQ+K   RI L+G+P+QNNL+E 
Sbjct: 431  --LPREWGY--------VVLDEGHKIRNPDSDISLTCKQIKTYNRIILSGTPIQNNLIEL 480

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 979
            + + DFV  G LG+   F+ +F  PI  G + N+++  V+   + + IL + +  ++ R 
Sbjct: 481  WSLFDFVFPGRLGTLPVFQQQFSIPINMGGYANASNIQVQTGYKCAVILRDLISPYLLRR 540

Query: 980  DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALA 1039
              + V +DLP K   V+ VKL+ +Q+ LY++FL     + +  S  K R++   G   L 
Sbjct: 541  LKSDVAQDLPKKNEMVLFVKLTQVQQELYEKFL----HSEELSSILKGRRNVLMGVDILR 596

Query: 1040 QIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK 1099
            +I NHP ++                         N  I E  +N N              
Sbjct: 597  KICNHPDLV-------------------------NRDILEHKKNYN-------------- 617

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
                       Y     SGKM +L ++L +  +   K+L+F Q+   LD++E +++ L  
Sbjct: 618  -----------YGNPVKSGKMQVLKNLLQLWQSQEHKTLLFCQTRQMLDILEKFVANL-- 664

Query: 1160 PGKQGKLWKKGKDWY---RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
                 +L     +++   R+DG T  ++RQ LV++FN   N  V   L++T+ G LG+NL
Sbjct: 665  -----RLLDIDHEYFTYLRMDGSTPIAKRQDLVDKFNSDPNLHV--FLLTTKVGGLGVNL 717

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              A+RVII D  WNP+ D+QA  RAWR GQ K +  YRLM  G++EEKIY RQ+ K  L 
Sbjct: 718  TGADRVIIYDPDWNPSTDIQARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLT 777

Query: 1277 ARVVDRQQVHRTISKEEMLHLFEFGD 1302
             +++   +  R     ++  LF  GD
Sbjct: 778  NKILKDPKQRRFFKVNDLHDLFTLGD 803


>gi|134109445|ref|XP_776837.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50259517|gb|EAL22190.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1045

 Score =  246 bits (627), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 183/588 (31%), Positives = 284/588 (48%), Gaps = 115/588 (19%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++FM+  ++       +G +G GCILA  MGLGKT Q IA +YT ++     
Sbjct: 332  LRDHQKEGVKFMYSCVMG-----MTGAEGEGCILADEMGLGKTLQTIALIYTMLKQSPFA 386

Query: 784  LRT-----ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKG 838
             +T     A+IV PV ++ NW++EF KW                  DRR  +L    A G
Sbjct: 387  NQTSIIGKAIIVCPVTLVDNWRKEFKKWV-----------------DRRVNVLV---ADG 426

Query: 839  GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQ 898
                   T +R  SF      R + +E+   +    D++VCDE H +K+    T +    
Sbjct: 427  -------TDYRVSSFL-----RKVVKELASCIPPI-DLIVCDEGHRLKSKDNKTIKMFDM 473

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            +K QRRI    +P+QN+L EY+ MV+F   G LG    F   ++ PI   +  N +++DV
Sbjct: 474  LKTQRRIR---TPVQNDLGEYWAMVNFACPGVLGKYSAFAKHYEKPILKSRTPNCSAKDV 530

Query: 959  KIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT 1018
            ++  +R++ L +  K FV R    V++  LPPK  +VI +  S LQ  +    LD     
Sbjct: 531  ELGRERANDLAKLSKEFVLRRTAAVLENYLPPKYEYVIFIAPSLLQLSVLSNLLD----- 585

Query: 1019 NDRVSNEKIRKSFFAGY--QALA------QIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
                    I  SF  GY  Q+LA      +I N P +L+   D+   + +D   ++S   
Sbjct: 586  ------PNIVGSFIRGYGAQSLALIDLMRKISNSPMLLKRRDDELARANDDLGSATS--- 636

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL---LDIL 1127
                  I   P + N                           ++  SGKM++L   L  +
Sbjct: 637  ----AAISAIPSDAN-------------------------INDVTTSGKMLMLDKMLHSI 667

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
              C+   +K +V S    TLDLI            QG    K  ++ RLDG T   +RQ+
Sbjct: 668  YQCTE--EKVVVVSNWTSTLDLI------------QGLCKLKRYNYLRLDGSTPPKQRQE 713

Query: 1188 LVERFNEPLNKRVKCT-LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
            LV+RFN+   ++     L+S +AG +G+NL   +R+I+ D  WNP+ DLQA+ R  R GQ
Sbjct: 714  LVDRFNKDKGRQESFVFLLSAKAGGVGLNLIGGSRLILFDSDWNPSTDLQAMARIHRDGQ 773

Query: 1247 TKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
             +PV+ YR +    ++EKIY+RQ+TK GL+ +++D+ +  +  SK+  
Sbjct: 774  KRPVYIYRFLTTNAIDEKIYQRQITKTGLSDQMMDQTRTEKQTSKDSF 821


>gi|85092588|ref|XP_959470.1| DNA repair and recombination protein RAD54 [Neurospora crassa OR74A]
 gi|28920899|gb|EAA30234.1| DNA repair and recombination protein RAD54 [Neurospora crassa OR74A]
 gi|40804592|emb|CAF05853.1| Rad54 homolog MUS-25 [Neurospora crassa]
          Length = 831

 Score =  246 bits (627), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 186/619 (30%), Positives = 298/619 (48%), Gaps = 95/619 (15%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++   E  R+P  I  +L    + HQ+ G+RFM+  +   I      +K  GCI+
Sbjct: 195  ILGIKKKVEGEHPRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMI-----DEKANGCIM 249

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LK 812
            A  MGLGKT Q I  L+T ++ S + G   ++ A++  P +++ NW  E +KW  ++ + 
Sbjct: 250  ADEMGLGKTLQCITLLWTLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAIT 309

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      E+++R  R   +A  R+    V ++ Y   R N+                
Sbjct: 310  PFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVD--------------- 354

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              L+  P  +++CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++ F 
Sbjct: 355  -ELKGTPIGLMLCDEGHRLKNGDSQTFSALNSLNVSRRVILSGTPIQNDLSEYFALISFA 413

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
                LG+  EFR RF+ PI  G+  +++  + K  ++    L   +  F+ R   +++ K
Sbjct: 414  NPDLLGTRLEFRKRFEIPILRGRDADASEAERKRGDECLVELLAIVNKFIIRRTNDILSK 473

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
             LP K   V+   L+P Q  LY  F+   D+      + S              L ++ N
Sbjct: 474  YLPVKYEHVVFCNLAPFQLDLYNYFVASPDIQALLRGKGSQP------LKAINILKKLCN 527

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP +L L+ D     +   ED    E                   +G++ D    K W  
Sbjct: 528  HPDLLDLSADLPGCEQYWPEDYVPKEA------------------RGRDRD---VKPW-- 564

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
                        YSGKM +L  +L  + ++  DK ++ S    TLDL E    +L R  +
Sbjct: 565  ------------YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFE----RLCRNRQ 608

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
             G L        RLDG    ++RQKLV++FN+P        L+S++AG  G+NL  ANR+
Sbjct: 609  YGCL--------RLDGTMNVNKRQKLVDKFNDPEGDEF-VFLLSSKAGGCGLNLIGANRL 659

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            ++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD 
Sbjct: 660  VLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDS 719

Query: 1283 -QQVHRTISKEEMLHLFEF 1300
             + V R  S + +  LF +
Sbjct: 720  AEDVERHFSLDSLRELFTY 738


>gi|291383503|ref|XP_002708309.1| PREDICTED: RAD26L hypothetical protein-like [Oryctolagus cuniculus]
          Length = 1644

 Score =  246 bits (627), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 194/644 (30%), Positives = 290/644 (45%), Gaps = 131/644 (20%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            EE   IP +I+  L+ +Q  G +F++ +  Q          G GCIL   MGLGKT QVI
Sbjct: 99   EEGDSIPYTINRYLRDYQREGTQFLYGHYRQ----------GRGCILGDDMGLGKTVQVI 148

Query: 771  AFLYTAM------------------RSVNLGLRTA------LIVTPVNVLHNWKQEFMKW 806
            +FL   +                  RS+   L ++      LIV P++VL+NWK E   W
Sbjct: 149  SFLAAVLHKKGTREDIENNMPEFLLRSMKKELPSSMTKKMFLIVAPLSVLYNWKDELDTW 208

Query: 807  RPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI 866
                    RV +L    +D   EL+   + K  + L  Y   R            +  + 
Sbjct: 209  -----GYFRVTVLHGNRKDN--ELMRIKQRKCEIALTTYETLR------------LCLDE 249

Query: 867  CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
             ++L+     ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+ 
Sbjct: 250  LNSLEW--SAIIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWA 307

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
              G LGS   F+ +F +P+E+GQ   +T  ++    +    L  ++ G   R    ++K 
Sbjct: 308  VPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMRRLAGRMAGSFLRRTKTLIKD 367

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFLDLHGF------------------------TNDRV 1022
             LP K   ++   L+  Q+ +Y+  L+                            TN R 
Sbjct: 368  QLPKKEDRMVYCSLTEFQKAVYQTVLETEDVTLILQSSKPCTCNSGRKRRSCCYKTNSR- 426

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNV---VIGE 1079
              ++++    +    L ++ NH  +LQ            A  +S  E +   +   V  +
Sbjct: 427  -GDEVKTLCLSYLTVLQKVANHVALLQ------------AASTSKQETLIKRICDQVFSK 473

Query: 1080 KPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLV 1139
             P    DF+Q   D  F             T  +  YSGKM +L  +L  C    DK L+
Sbjct: 474  FP----DFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRRNRDKVLL 517

Query: 1140 FSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKR 1199
            FS S   LD+++ Y                G D+ RLDG T+S ER K+V+ FN    + 
Sbjct: 518  FSFSTKLLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQD 563

Query: 1200 VKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHG 1259
            V   L+ST AG LG+N   AN VI+ D +WNP  DLQAI RA+R GQ + V   RL++ G
Sbjct: 564  VNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLG 623

Query: 1260 TMEEKIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            T+EE +Y RQ+ K+ L   VV  +   R       SKE    LF
Sbjct: 624  TVEEIMYLRQLYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 667


>gi|358341364|dbj|GAA49064.1| DNA excision repair protein ERCC-6 [Clonorchis sinensis]
          Length = 1267

 Score =  246 bits (627), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 208/705 (29%), Positives = 313/705 (44%), Gaps = 128/705 (18%)

Query: 629  RKQKKKIRRI--LDDAELGEETKRKIAIEKERQERLKSLQVQFSSK-SKLMNSVTLDGDL 685
            R  KK IR I  LDDA L +  KR       RQ  L +L+ Q + +  +  + V  DG L
Sbjct: 81   RLPKKPIRTIKKLDDANLEQFQKRL-----RRQRHLDALERQLAKEHGEDPDPVPPDGQL 135

Query: 686  SAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRK 745
                                     ++   +P  I ++L  +Q  G+ ++W+        
Sbjct: 136  -------------------------DKNFLVPGRIWSRLFEYQRTGVNWLWQ-------- 162

Query: 746  VKSGDKGLGCILAHTMGLGKTFQVIAFL----YTAM----RSVNLG-----------LRT 786
                 K  G IL   MGLGKT Q+IAFL    Y+      +S +LG             +
Sbjct: 163  --LHQKQSGGILGDEMGLGKTIQIIAFLAGLHYSEFLVTGKSGHLGPGPSHRHSTGDFAS 220

Query: 787  ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS---RDRRAELLAKWRAKGGVFLI 843
            ALIV P  VL  W +EF +W P+    +RV +L       +   + + +     G V L 
Sbjct: 221  ALIVCPATVLQQWLREFHQWYPA----MRVAILHSTGSGYQKPNSLIRSMGNHPGSVLLT 276

Query: 844  GYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQR 903
             Y                  +++  A++     L+ DE H IKN  A+ T A+K+     
Sbjct: 277  TYQTLVTY------------QDVLTAVEPSWTYLILDEGHKIKNPEAEVTHAVKRFATSH 324

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            R+ L+GSP+QNNL E + + DFV  G LG   EF  +F  PI  G + +++   V+   +
Sbjct: 325  RLILSGSPMQNNLRELWSLFDFVSPGRLGPLPEFMQQFAIPITQGGYASASPLQVETAYR 384

Query: 964  RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS 1023
             +  L + L  F+ R     V+  LP K+  V+  +L+  QR+LY+ F +      D ++
Sbjct: 385  CACTLRDLLMPFLIRRLKTDVQIQLPAKSEQVLFCRLTNYQRQLYREFAESQ-LCKDLLN 443

Query: 1024 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 1083
                + + F     L ++ NHP ++      G P              D+ ++  E P +
Sbjct: 444  G---KGNVFTALILLRKLCNHPDLV-----TGGPR-------------DHILLGDELPED 482

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 1143
              D         +     W        +     S KM+++  +L   S  G K L+FSQS
Sbjct: 483  DVDVTTVSRISEY----GWT------RFGCPRRSSKMLVVASLLRTWSTQGHKVLLFSQS 532

Query: 1144 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLN---KRV 1200
               L L+E  L  L            G  + R+DG T  S+R  L++RFN   +   + +
Sbjct: 533  RRMLCLLERLLITL------------GITYLRMDGSTPVSQRPALIDRFNRSTDSSAENI 580

Query: 1201 KCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGT 1260
               L++TR G LGINL +ANRV+I D  WNP  DLQA  RAWR GQT+ V  YRL+  GT
Sbjct: 581  FVFLLTTRVGGLGINLTAANRVLIFDPDWNPMTDLQARERAWRIGQTQDVIIYRLLTSGT 640

Query: 1261 MEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
            +EEKIY RQ+ K+ L  RV+   +  R     ++  L  F D E+
Sbjct: 641  IEEKIYHRQIFKQFLTNRVLKNPRQQRFFKTNDLQELLSFDDGES 685


>gi|451996821|gb|EMD89287.1| hypothetical protein COCHEDRAFT_1180734 [Cochliobolus heterostrophus
            C5]
          Length = 1221

 Score =  246 bits (627), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 180/607 (29%), Positives = 281/607 (46%), Gaps = 101/607 (16%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
              RIP  I   L  +Q  G++++WE   Q++          G I+   MGLGKT Q ++F
Sbjct: 388  GFRIPGDIYPALFDYQKTGVQWLWELYSQNV----------GGIIGDEMGLGKTIQAVSF 437

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRD 825
            +   +    L  +  ++V P  V+  W  EF +W P+    LRV +L        D  R+
Sbjct: 438  V-AGLHYSKLLTKPVIVVCPATVMKQWVNEFHRWWPA----LRVSILHTSGSGMLDTRRE 492

Query: 826  RRAELLAKWRAKGG--VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL------ 877
             R E   + R  G     L G          K  +D ++       LQ   + L      
Sbjct: 493  DRIEREMELRNYGDYDTTLTGAGKAAKKILEKVKRDGHVLVTTYSGLQTYAEFLIPTEWE 552

Query: 878  --VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
              V DE H I+N     T   K+++   RI L+G+P+QNNL E + + DFV    LG+  
Sbjct: 553  CAVLDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLV 612

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVF 994
             FRN+F+ PI+ G + N+++ + +   + +  L + +  ++ QR   +V   DLP K   
Sbjct: 613  NFRNQFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKADVAT-DLPQKKEQ 671

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
            V+  KL+  QR+ Y+ FL     + D  S    ++    G   L +I NHP    LT+ K
Sbjct: 672  VLFCKLTKQQRQAYESFL----ASEDMRSIANGKRQMLYGVDYLRKICNHP---DLTEHK 724

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                                  + +KP                           + Y   
Sbjct: 725  ---------------------TLSKKP--------------------------GYDYGNA 737

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGKM ++ ++L++    G K+L+F+Q    LD+++ ++S+LP             +W 
Sbjct: 738  SKSGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFISQLP-----------DINWR 786

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            R+DG T   +RQ +V+ FN   N  V   L++T+ G LG+NL  ANRVII D  WNP+ D
Sbjct: 787  RMDGETPIKDRQNMVDEFNTDPNLHV--FLLTTKVGGLGVNLTGANRVIIYDPDWNPSTD 844

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            +QA  R+WR GQ + V  YRLM+ GT+EEKIY RQ+ K+ L  +V+   +  +T    ++
Sbjct: 845  IQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQTFQMSDL 904

Query: 1295 LHLFEFG 1301
              LF  G
Sbjct: 905  HDLFSLG 911


>gi|406864834|gb|EKD17877.1| DNA repair protein rhp26 [Marssonina brunnea f. sp. 'multigermtubi'
            MB_m1]
          Length = 1202

 Score =  246 bits (627), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 187/609 (30%), Positives = 290/609 (47%), Gaps = 105/609 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +  +++P  I   L  +Q  G++++ E   Q +          G I+   MGLGKT Q+I
Sbjct: 397  DNGLKLPGDIYPALFDYQKTGVQWLGELYAQQV----------GGIVGDEMGLGKTIQII 446

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVS 823
            +FL     S  L  R  ++V P  VL  W  EF +W P    PLRV +L        +V 
Sbjct: 447  SFLAGLHYSKKL-TRPIIVVAPATVLRQWVNEFHRWWP----PLRVSILHSSGSGMLNVG 501

Query: 824  RDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL------ 877
             + R +   +   +         A + +   + VK  ++       LQ   D+L      
Sbjct: 502  SEGRMDDSQEIYGRSNGKSKSSKAAKKI-VDRVVKHGHVLVTTYAGLQTYADVLIPVDWD 560

Query: 878  --VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
              V DE H I+N     T   K+++   R+ L+G+PLQNNL+E + + DFV    LG+  
Sbjct: 561  YAVLDEGHKIRNPNTAITIYCKELRTPNRVILSGTPLQNNLVELWSLFDFVFPMRLGTLV 620

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVF 994
             FR  F+ PI+ G + N+T+  V    + +  L   +  ++ QR+ ++V   DLP K+  
Sbjct: 621  NFRQAFEVPIKLGGYANATNLQVLTATKCAETLKAAISPYLLQRLKVDVAS-DLPKKSEQ 679

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSN--EKIRKSFFAGYQALAQIWNHPGILQLTK 1052
            V+  KL+  QR  Y+ FL     ++D +++  ++ R+S + G   L +I NHP +L    
Sbjct: 680  VLFCKLTKPQREAYEMFL-----SSDEMTSIMDRTRQSLY-GIDILRKICNHPDLLD--- 730

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 1112
                                        PR     L+GK   G+    W N         
Sbjct: 731  ----------------------------PR-----LKGK--PGY---RWGNP-------- 744

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
              + SGKM ++  +L M    G K+L+FSQ +  L++IE ++  L            G +
Sbjct: 745  --NKSGKMQVVKALLEMWKGFGHKTLLFSQGVLMLNIIEEFVKGL-----------NGFN 791

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            + R+DG T   ERQ LV+RFN   +  +   L++T+ G LG+NL  ANRVII D  WNP+
Sbjct: 792  YLRMDGSTSIKERQTLVDRFNN--DPDLHVFLLTTKVGGLGVNLTGANRVIIFDPDWNPS 849

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 1292
             D+QA  RAWR GQ K V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T   +
Sbjct: 850  TDVQARERAWRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMK 909

Query: 1293 EMLHLFEFG 1301
            ++  LF  G
Sbjct: 910  DLYDLFTLG 918


>gi|330932428|ref|XP_003303771.1| hypothetical protein PTT_16121 [Pyrenophora teres f. teres 0-1]
 gi|311319996|gb|EFQ88126.1| hypothetical protein PTT_16121 [Pyrenophora teres f. teres 0-1]
          Length = 1250

 Score =  246 bits (627), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 183/610 (30%), Positives = 284/610 (46%), Gaps = 107/610 (17%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
              RIP  I   L  +Q  G++++WE   Q++          G I+   MGLGKT Q I F
Sbjct: 405  GFRIPGDIYPALFDYQKTGVQWLWELYSQNV----------GGIIGDEMGLGKTIQAIGF 454

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRD 825
            +     S  L  +  ++V P  V+  W  EF +W P+    LRV +L        D  R+
Sbjct: 455  VAGLHYSKKL-TKPVIVVCPATVMKQWVNEFHRWWPA----LRVSILHTSGSGMLDTRRE 509

Query: 826  RRAELLAKWRAKGG--VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV----- 878
             R E   + R  G     L G          K  +D ++       LQ   + L+     
Sbjct: 510  DRLEQEMELRRYGDYDTTLTGAGKAAKKVLEKVKRDGHVLVTTYSGLQTYAEFLIPTEWE 569

Query: 879  ---CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
                DE H I+N     T   K+++   RI L+G+P+QNNL E + + DFV    LG+  
Sbjct: 570  CAILDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLV 629

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVF 994
             FRN+F+ PI+ G + N+++ + +   Q +  L + +  ++ QR  ++V   DLP K   
Sbjct: 630  NFRNQFEFPIKRGGYANASNLEFETAVQCAETLKDAVSPYLLQRFKVDVAT-DLPQKKEQ 688

Query: 995  VITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
            V+  KL+  QR+ Y+ FL   D+    N +      R+  F G   L +I NHP    LT
Sbjct: 689  VLFCKLTRQQRQAYEGFLASEDMKSIANGK------RQMLF-GVDFLRKICNHP---DLT 738

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
            + K                      + +KP                           + Y
Sbjct: 739  EHK---------------------TLSKKP--------------------------GYDY 751

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
               + SGKM ++ ++L++    G K+L+F+Q    LD+++ ++S+LP             
Sbjct: 752  GNPNRSGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFVSQLP-----------DI 800

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
            +W R+DG T   +RQ LV+ FN   +  +   L++T+ G LG+NL  ANRVII D  WNP
Sbjct: 801  NWRRMDGETPIKDRQNLVDEFNN--SPDLHVFLLTTKVGGLGVNLTGANRVIIYDPDWNP 858

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            + D+QA  R+WR GQ + V  YRLM+ GT+EEKIY RQ+ K+ L  +V+   +  +T   
Sbjct: 859  STDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQTFQM 918

Query: 1292 EEMLHLFEFG 1301
             ++  LF  G
Sbjct: 919  SDLHDLFTLG 928


>gi|440467195|gb|ELQ36432.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae Y34]
          Length = 869

 Score =  246 bits (627), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 188/640 (29%), Positives = 306/640 (47%), Gaps = 104/640 (16%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGE-EAVRIPSSISAKL----KAHQVVGIRFM 735
            LD  L   +  E+LG          +++K E E  R+P  I  +L    + HQ+ G++FM
Sbjct: 242  LDAPLVHKSLAEILG----------IKKKVEGEHPRVPVVIDPRLAKVLRPHQIEGVKFM 291

Query: 736  WENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR----SVNLGLRTALIVT 791
            +  +   I      +K  GCI+A  MGLGKT Q I  L+T ++    +    ++ A++  
Sbjct: 292  YRCVTGMI-----DEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPAIQKAIVAC 346

Query: 792  PVNVLHNWKQEFMKWRPSE-LKPLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYT 846
            P +++ NW  E +KW  ++ + P  +      E+++R  R   ++  RA    V ++ Y 
Sbjct: 347  PSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAISSGRAVTRPVIIVSYE 406

Query: 847  AFR-NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRI 905
              R N+   KH K                 +++CDE H +KN  + T  AL  +   RR+
Sbjct: 407  TLRLNVEELKHTKI---------------GLMLCDEGHRLKNGDSQTFTALNNLNVSRRV 451

Query: 906  ALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRS 965
             L+G+P+QN+L EY+ ++ F     LG+  EFR RF+ PI  G+  +++ ++    ++  
Sbjct: 452  ILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERVKGDECL 511

Query: 966  HILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRV 1022
              L   +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   D+      + 
Sbjct: 512  KELLALVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGKG 571

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPR 1082
            S              L ++ NHP +L L+        +D   S +    DY   + ++ R
Sbjct: 572  SQP------LKAIGILKKLCNHPDLLNLS--------DDLPGSEAHWPSDY---VPKESR 614

Query: 1083 NMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFS 1141
              +  +          K W              YSGKM +L  +L  + ++  DK ++ S
Sbjct: 615  GRDREI----------KPW--------------YSGKMQVLDRMLARIRADTNDKIVLIS 650

Query: 1142 QSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVK 1201
                TLDL E    +L R    G L        RLDG    ++RQKLV++FN+P      
Sbjct: 651  NYTSTLDLFE----RLCRNRGYGSL--------RLDGTMNVTKRQKLVDKFNDPEGSEF- 697

Query: 1202 CTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTM 1261
              L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A G++
Sbjct: 698  VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSI 757

Query: 1262 EEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEF 1300
            EEKI++RQ  K+ L++ VVD  + V R  S + +  LF++
Sbjct: 758  EEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLKELFQY 797


>gi|255936215|ref|XP_002559134.1| Pc13g07020 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583754|emb|CAP91771.1| Pc13g07020 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1116

 Score =  246 bits (627), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 188/620 (30%), Positives = 291/620 (46%), Gaps = 109/620 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +  +R+P  IS  L ++Q  G++++WE   Q++          G I+   MGLGKT Q I
Sbjct: 319  DNGLRVPGDISRFLFSYQKTGVQWLWELHQQTV----------GGIIGDEMGLGKTIQAI 368

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
            ++L  A+       + A++V P  ++  W  EF +W P    P RV +L   S       
Sbjct: 369  SYL-AALHHSKKFTKPAIVVCPATLMKQWVNEFHRWWP----PFRVSILH--SSGSGMIN 421

Query: 831  LAKWRAKGGVF---LIGYTAFRNLSFGKHVKDRNMAR--EICH-------ALQDGPDILV 878
            + K  ++       ++G  + R+LS G+    + + R  E  H        LQ   D LV
Sbjct: 422  IGKESSRENALTSEMMGSHSSRHLSAGQKAAKKIIKRVTEDGHVLVTTYSGLQSYADALV 481

Query: 879  --------CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
                     DE H I+N  A  T + K+++   RI L+G+P+QN+L++ + + DFV    
Sbjct: 482  DVEWGCAILDEGHKIRNPDAGITFSCKELRTPHRIILSGTPMQNSLVDLWSLFDFVFPMR 541

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLP 989
            LG+   F+N+F+ PI  G + ++++  V+   + +  L + +  ++ QR   +V   DLP
Sbjct: 542  LGNLVTFKNQFEIPIRQGGYASASNLQVQTAAKCAETLKDAISPYLLQRFKADVTS-DLP 600

Query: 990  PKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ 1049
             K+  VI  KL+ LQR +YKRFL     ++D  S  + R++   G   L +I NHP +  
Sbjct: 601  LKSEQVIFCKLTQLQRTIYKRFLG----SDDMKSIIRGRRNSLYGIDILRKISNHPDLAD 656

Query: 1050 LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEH 1109
             T                                    L+ +  D               
Sbjct: 657  HT------------------------------------LRSREAD--------------- 665

Query: 1110 TYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKK 1169
             Y + + SGKM +L  +L +  + G K+L+F+Q    LD+IE +L  L            
Sbjct: 666  -YGDAERSGKMKVLKGLLEVWRDTGHKTLLFTQGRLMLDIIEKFLGVL-----------G 713

Query: 1170 GKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
            G +  R+DG T   ERQ LV  FN   N  +   L++TR G +G+NL  A+RVII D  W
Sbjct: 714  GFNCRRMDGTTPIKERQSLVNDFNNDPN--IHVFLLTTRVGGIGVNLTGADRVIIYDPDW 771

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTI 1289
            NP+ DLQA  RAWR GQ + V  +RLM  GT+EEKIY RQ+ K+ L  ++          
Sbjct: 772  NPSTDLQARERAWRLGQKRDVTIFRLMTKGTIEEKIYHRQIFKQFLTNKITRDPHQREGF 831

Query: 1290 SKEEMLHLFEFGDDENPDPL 1309
               ++  LF    DEN D L
Sbjct: 832  QLSDLYDLFTL-TDENDDEL 850


>gi|347828015|emb|CCD43712.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 962

 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 184/587 (31%), Positives = 279/587 (47%), Gaps = 86/587 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---- 779
            L+ HQ  G++F++E ++   R       G G ILA  MGLGKT Q IA L+T ++     
Sbjct: 305  LRDHQKEGVKFLYECVM-GYRSFN----GQGAILADEMGLGKTLQTIALLWTLLKQNPEH 359

Query: 780  VNLG--LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAK 837
             + G  ++ ALIV PV ++ NWK EF KW  +E   + VF + D S++ R       ++ 
Sbjct: 360  PHEGGVIKKALIVCPVTLISNWKAEFNKWLGNER--IGVF-VADGSKNIRLTDFTHGKSY 416

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              V +IGY            K R +  E+      G DI+V DE H +K     + QA+K
Sbjct: 417  S-VMIIGYE-----------KLRTVQEELKKG--SGIDIVVADEGHRLKTAANKSAQAIK 462

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             +  +RR+ L+G+P+QN+L E++ MVDFV  G L   + F+  F+ PI   +   +T  D
Sbjct: 463  NLNTERRVILSGTPIQNDLSEFFTMVDFVNPGLLNGYNTFKKCFEAPILKSRQPGATESD 522

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
            ++    R   L E  K F+ R + +++ K L PKT +V+  K +  Q  +Y+  L    F
Sbjct: 523  MEKGTAREEELAELTKLFILRRNASILAKYLKPKTEYVLFCKPTQAQAEVYQHVLASPVF 582

Query: 1018 TNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAE---DSSSDENMDYN 1074
                 S+E    +       L ++ N P +L    D   PS  +     +S   E +  N
Sbjct: 583  GRVLGSSE----ASLQLITMLKKVCNAPSLLVKKSDTDTPSNSNVAQLLESIPPEILKKN 638

Query: 1075 -VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNM 1133
             VV   K R +N  L                                      + +  + 
Sbjct: 639  PVVASSKFRVLNRML--------------------------------------MRLSKST 660

Query: 1134 GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN 1193
             +K ++ S    TLDL+  +LS L  P            + RLDG T  ++RQ LV  FN
Sbjct: 661  TEKIVIVSNYTSTLDLLVSHLSSLNLP------------FLRLDGSTPQAKRQDLVNTFN 708

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
            +    +    L+S ++G  GINL  A+R+++ D  WNP  DLQA+ R  R GQ +PV  Y
Sbjct: 709  KTPASKYFAFLLSAKSGGAGINLIGASRLVLFDVDWNPATDLQAMARIHRDGQKRPVKIY 768

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            R +  G M+EKIY+RQVTK GLA  V+D ++   + S +E+  LF  
Sbjct: 769  RFLMSGGMDEKIYQRQVTKMGLADSVMDGKKNEASFSADELRDLFRL 815


>gi|350630130|gb|EHA18503.1| hypothetical protein ASPNIDRAFT_128714 [Aspergillus niger ATCC 1015]
          Length = 1740

 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 193/626 (30%), Positives = 293/626 (46%), Gaps = 105/626 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   ++P  I  +L    + HQV G  F++      + K  +G     CI+A  M
Sbjct: 173  LKKKTEGRPKVPVVIDPRLAKVLRPHQVEG--FLYRCTTGMVDKNANG-----CIMADGM 225

Query: 762  GLGKTFQVIAFLYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSE-LKPLRV 816
            GLGKT Q I+ ++T ++ S   G+ T    +I  P +++ NW  E +KW   + + P  V
Sbjct: 226  GLGKTLQCISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAV 285

Query: 817  FMLEDVSRDRRAELLAK---WRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   +  + EL+++   W    G      V +I Y   R                  
Sbjct: 286  -----DGKASKTELISQMKQWAIASGRAIVRPVLIISYETLR---------------LYV 325

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              L+D P  +L+CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ ++ F 
Sbjct: 326  DTLRDSPIGLLLCDEGHRLKNKESLTWTALNGLNVQRRVILSGTPIQNDLSEYFALLHFA 385

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
                LGS +EFR RF+ PI  G+    T ED+K  ++R   L   +  F+ R   +++ K
Sbjct: 386  NPNLLGSQNEFRKRFELPILRGRDAAGTEEDLKKGDERLAELSGIVNKFIIRRTNDILSK 445

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
             LP K   V+   +S  Q  LYK F+   ++      + S              L ++ N
Sbjct: 446  YLPVKYEHVVFCNMSAFQLGLYKHFIQSPEIKSLLRGKGSQP------LKAIGLLKKLCN 499

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP +L L+ D         ED    E                   +G++ D    K W  
Sbjct: 500  HPDLLNLSNDLPGCEYTFPEDYVPPEA------------------RGRDRD---IKSW-- 536

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
                        YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R   
Sbjct: 537  ------------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRTRG 580

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
             G L        RLDG     +RQKLV++FN P  +     L+S++AG  G+NL  ANR+
Sbjct: 581  YGSL--------RLDGTMTVGKRQKLVDKFNNPDGEEF-VFLLSSKAGGCGLNLIGANRL 631

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            ++ D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD 
Sbjct: 632  VLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDS 691

Query: 1283 -QQVHRTISKEEMLHLFEFGDDENPD 1307
             + V R  S E +  LF+F  +   D
Sbjct: 692  AEDVERHFSLESLRELFQFKPETRSD 717


>gi|380027284|ref|XP_003697358.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Apis
            florea]
          Length = 717

 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 179/579 (30%), Positives = 274/579 (47%), Gaps = 96/579 (16%)

Query: 709  KGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ 768
            + E+ V I + +   L+ HQ  GI F++E I+    KV +     G ILA  MGLGKT Q
Sbjct: 111  QNEKEVSIDACLVNVLRPHQRHGIVFLYECIMG--LKVPNY---FGAILADEMGLGKTLQ 165

Query: 769  VIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
             I  ++T ++    G   L+  LIVTP ++ +NW +EF  W         V   ++   +
Sbjct: 166  CITIIWTLLKKGPYGYPILKYVLIVTPSSLCNNWNKEFKHWLGFHRISPYVVNAKNKPNN 225

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMI 885
             + ++      +  V +I Y           +K R    +I        D+++CDE H +
Sbjct: 226  FKKQI------RNSVMIISYEML--------IKYRQEIEQIAF------DLIICDEGHRL 265

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN    TT+ L  + C+RRI LTG+P+QN+L E++ ++DFV    LGSS EF+N ++ PI
Sbjct: 266  KNNDIKTTKILSNLNCKRRILLTGTPVQNDLQEFFALIDFVNPVILGSSSEFKNYYEKPI 325

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
               Q  N++   + +  +R++ LYE+ K F+ R    ++ K LP K   VI  +LS  Q 
Sbjct: 326  VASQCPNASCHVISLGTERANELYEKTKCFILRRTQEIINKYLPSKHELVIFCRLSDEQE 385

Query: 1006 RLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDS 1065
             LY R  +L  F  + + N  I         AL +I NHP +                  
Sbjct: 386  DLYSRITNL-WFNKNVLPNNNI--PHLTLITALKKICNHPEL------------------ 424

Query: 1066 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD---YSGKMVL 1122
                                 F   KND            L++ + K +    Y GK+ +
Sbjct: 425  ---------------------FYNDKNDLC----------LNKVSIKNITRKGYYGKISI 453

Query: 1123 LLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTES 1182
            +  ++       +K ++ S    TLDL+E       R      L      + RLDG T S
Sbjct: 454  VQTLIRNLKKTNEKLVLISYYTQTLDLLE-------RVCNMECL-----QFLRLDGNTTS 501

Query: 1183 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1242
            + R K++E+FN   N   K  L+S +AG +G+NL  A+R+I+ D  WNP  D QA+ R W
Sbjct: 502  NTRSKIIEQFNST-NDNNKVFLLSAKAGGVGLNLPGASRLILFDSDWNPASDSQAMARIW 560

Query: 1243 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            R GQ   V+  RL+  GT+EEKI++RQ+ K  L+  VVD
Sbjct: 561  RDGQKNDVYILRLLTTGTIEEKIFQRQINKANLSETVVD 599


>gi|154316345|ref|XP_001557494.1| hypothetical protein BC1G_03758 [Botryotinia fuckeliana B05.10]
          Length = 917

 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 184/587 (31%), Positives = 279/587 (47%), Gaps = 86/587 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---- 779
            L+ HQ  G++F++E ++   R       G G ILA  MGLGKT Q IA L+T ++     
Sbjct: 260  LRDHQKEGVKFLYECVM-GYRSFN----GQGAILADEMGLGKTLQTIALLWTLLKQNPEH 314

Query: 780  VNLG--LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAK 837
             + G  ++ ALIV PV ++ NWK EF KW  +E   + VF + D S++ R       ++ 
Sbjct: 315  PHEGGVIKKALIVCPVTLISNWKAEFNKWLGNER--IGVF-VADGSKNIRLTDFTHGKSY 371

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              V +IGY            K R +  E+      G DI+V DE H +K     + QA+K
Sbjct: 372  S-VMIIGYE-----------KLRTVQEELKKG--SGIDIVVADEGHRLKTAANKSAQAIK 417

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             +  +RR+ L+G+P+QN+L E++ MVDFV  G L   + F+  F+ PI   +   +T  D
Sbjct: 418  NLNTERRVILSGTPIQNDLSEFFTMVDFVNPGLLNGYNTFKKCFEAPILKSRQPGATESD 477

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
            ++    R   L E  K F+ R + +++ K L PKT +V+  K +  Q  +Y+  L    F
Sbjct: 478  MEKGTAREEELAELTKLFILRRNASILAKYLKPKTEYVLFCKPTQAQAEVYQHVLASPVF 537

Query: 1018 TNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAE---DSSSDENMDYN 1074
                 S+E    +       L ++ N P +L    D   PS  +     +S   E +  N
Sbjct: 538  GRVLGSSE----ASLQLITMLKKVCNAPSLLVKKSDTDTPSNSNVAQLLESIPPEILKKN 593

Query: 1075 -VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNM 1133
             VV   K R +N  L                                      + +  + 
Sbjct: 594  PVVASSKFRVLNRML--------------------------------------MRLSKST 615

Query: 1134 GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN 1193
             +K ++ S    TLDL+  +LS L  P            + RLDG T  ++RQ LV  FN
Sbjct: 616  TEKIVIVSNYTSTLDLLVSHLSSLNLP------------FLRLDGSTPQAKRQDLVNTFN 663

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
            +    +    L+S ++G  GINL  A+R+++ D  WNP  DLQA+ R  R GQ +PV  Y
Sbjct: 664  KTPASKYFAFLLSAKSGGAGINLIGASRLVLFDVDWNPATDLQAMARIHRDGQKRPVKIY 723

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            R +  G M+EKIY+RQVTK GLA  V+D ++   + S +E+  LF  
Sbjct: 724  RFLMSGGMDEKIYQRQVTKMGLADSVMDGKKNEASFSADELRDLFRL 770


>gi|50289791|ref|XP_447327.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526637|emb|CAG60264.1| unnamed protein product [Candida glabrata]
          Length = 1071

 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 189/627 (30%), Positives = 284/627 (45%), Gaps = 126/627 (20%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            +IP  I + L  +Q  G+++++E + Q  R         G I+   MGLGKT QV AFL 
Sbjct: 288  KIPGEIFSLLFNYQKTGVQWLYE-LFQQRR---------GGIIGDEMGLGKTIQVTAFL- 336

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV----------SR 824
             A+   NL     LIV P  V+  W  E  +W P    P R  +L  +          + 
Sbjct: 337  AALHHSNLLSGPVLIVCPATVMKQWCNEIHQWWP----PFRAVILHSIGAGMNDKSNLTE 392

Query: 825  DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR-----NMAREICHALQDGPDIL-- 877
            D    ++ K   +        T F +      +K +     +M   I   + DG  I+  
Sbjct: 393  DEIENMIIKSELEN-------TDFHDYENASKLKSKVETGMHMQNLISKVVADGHIIITT 445

Query: 878  -------------------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLME 918
                               V DE H I+N  ++ +   K++KC+ RI L+G+P+QNNL+E
Sbjct: 446  YVGLRIHSDKLLNVNWSYCVLDEGHKIRNPDSEISLTCKKLKCKNRIILSGTPIQNNLVE 505

Query: 919  YYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQR 978
             + + DF+  G LG+   F+ +F  PI  G + N+T+  V+   + +  L + +  ++ R
Sbjct: 506  LWSLFDFIYPGRLGTLPVFQQQFVQPINMGGYANATNTQVQTGYRCAVALRDLISPYLLR 565

Query: 979  MDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKI-RKSFFAGYQA 1037
                 V KDLP K   V+  KL+  QRR Y  FL     ++D +S  K  ++    G   
Sbjct: 566  RVKADVAKDLPKKKEMVLFCKLTEFQRRKYLEFL-----SSDELSQIKGGKRHVLYGIDI 620

Query: 1038 LAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFF 1097
            L +I NHP +L    D+ Y                                  KN  G  
Sbjct: 621  LRKICNHPDLL----DRDYI---------------------------------KNTSG-- 641

Query: 1098 QKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
                         Y +   SGKM ++  +L +  + G K+L+F+QS   LD++E ++ K 
Sbjct: 642  -------------YGDPKRSGKMQVVKQLLKLWKSEGHKTLLFTQSRQMLDILEEFI-KF 687

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
              P            + R+DG T    RQ LV+RFN   N+     L++TR G LG+NL 
Sbjct: 688  KEPELSDI------RYLRMDGTTSIQVRQTLVDRFN---NESYDVFLLTTRVGGLGVNLT 738

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANR+II D  WNP+ DLQA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  
Sbjct: 739  GANRIIIYDPDWNPSTDLQARERAWRIGQKREVSIYRLMISGTIEEKIYHRQIFKQFLMN 798

Query: 1278 RVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            +V+   +  R    +E+  LF  G ++
Sbjct: 799  KVLSDPKQKRFFKTKELQDLFSLGGEQ 825


>gi|380024032|ref|XP_003695811.1| PREDICTED: DNA repair and recombination protein RAD54-like [Apis
            florea]
          Length = 716

 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 180/601 (29%), Positives = 291/601 (48%), Gaps = 94/601 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---V 780
            L+ HQ  G++FM+E +       K  +   GCI+A  MGLGKT Q I  L+T ++     
Sbjct: 126  LRPHQREGVKFMYECVTG-----KRIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 180

Query: 781  NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAK--- 837
               +  A+IV P +++ NW  E  KW  + ++PL +        D +     K   +   
Sbjct: 181  KPLIDKAIIVAPSSLVKNWYNEIFKWLKNRIQPLAIDGGNKTDIDTKLIGFMKTYGRKCV 240

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              + +I Y  FR            +   I H  QD   +++CDE H +KN+   T QAL 
Sbjct: 241  NPILIISYETFR------------LHAHILH--QDEVGLILCDEGHRLKNSENQTYQALI 286

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             +K +RRI L+G+P+QN+L+EY+ +V FV +G LG++ EFR +F+ PI  GQ   +T  +
Sbjct: 287  NLKAKRRILLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPILRGQDAAATDTE 346

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
             K+  +R   L   +   + R    ++ K LP K   V+ +K+  +Q  LYK F+     
Sbjct: 347  RKLAQERLKELVAIVNKCLIRRTSALLSKYLPLKYELVVCIKMGKVQTDLYKNFIQSDSI 406

Query: 1018 TNDRVSN-EKIRK------SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
                  N E  +K      S  +    L ++ NHP ++                      
Sbjct: 407  KKSMEENLENCKKGKRESLSTLSAITLLKKLCNHPDLV---------------------- 444

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLDIL- 1127
              Y  ++             +  DGF  ++    +   ++ KE+  + SGK+++L  +L 
Sbjct: 445  --YEKIL-------------EKSDGF--ENAAKLMPSNYSTKEILPELSGKLMVLDCLLA 487

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
            ++ +   DK ++ S    TLDL E    KL         +K+  ++ RLDG     +R K
Sbjct: 488  SIKTTTNDKIVLVSNYTQTLDLFE----KL--------CYKRCYNYVRLDGTMTIKKRSK 535

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            +VERFN+  N      ++S++AG  G+NL  ANR+I+ D  WNP  D QA+ R WR GQ 
Sbjct: 536  VVERFNDS-NSNDFIFMLSSKAGGCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQK 594

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGDDENP 1306
            KP F       GT+EEKI++RQ  K+ L++ VVD+++ V R  +  ++  LF+  ++   
Sbjct: 595  KPCFT------GTIEEKIFQRQAHKKALSSTVVDQEEDVARHFTLNDLRDLFKLEENTIS 648

Query: 1307 D 1307
            D
Sbjct: 649  D 649


>gi|440906008|gb|ELR56322.1| Putative DNA repair and recombination protein RAD26-like protein,
            partial [Bos grunniens mutus]
          Length = 685

 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 187/633 (29%), Positives = 286/633 (45%), Gaps = 119/633 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G +F++ + IQ          G GCIL   MGLGKT QVI+FL  
Sbjct: 100  IPYTINRYLRDYQREGAQFLYGHFIQ----------GRGCILGDDMGLGKTVQVISFLAA 149

Query: 776  AM------------------RSV-----NLGLRTALIVTPVNVLHNWKQEFMKWRPSELK 812
             +                  R++     +   +  LIV P++VL+NWK E   W      
Sbjct: 150  VLGKKGTREDIENNMPEFLLRNMKKDPPSTAKKMFLIVAPLSVLYNWKDELDTW-----G 204

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
              RV +L    +D  +EL+   + K  + L  Y   R            +  +  ++L+ 
Sbjct: 205  YFRVTILHGNKKD--SELIRVKQRKCEIALTTYETLR------------LCLDELNSLEW 250

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G LG
Sbjct: 251  SA--IIVDEAHRIKNPKARVTEIMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLG 308

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            S   F+ +F +P+E+GQ   +T  ++    +    L  ++ G+  R    ++K  LP K 
Sbjct: 309  SRIHFKKQFSDPVEHGQRHTATKRELATGRKAMQRLARKMSGWFLRRTKTLIKDQLPKKE 368

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRKS 1030
              ++   L+  Q+ +Y+  L+    +                            E ++  
Sbjct: 369  DRMVYCSLTDFQKAVYQTVLETEDVSLILQSSEPCTCNSGQKRRNCCYKTNSQGETVKTL 428

Query: 1031 FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQG 1090
            +F+    L ++ NH  +LQ T             +S  +      +  +      DF+Q 
Sbjct: 429  YFSYLAVLQKVANHVALLQTT------------STSRQQETLIKRICDQVFSRFPDFVQK 476

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
              D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD++
Sbjct: 477  SKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNKDKVLLFSFSTKLLDVL 524

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            + Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST AG
Sbjct: 525  QQY------------CMASGLDYRRLDGSTKSEERIKIVKEFNS--TQDVNICLVSTMAG 570

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
             LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQV
Sbjct: 571  GLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQV 630

Query: 1271 TKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
             K+ L   VV  +   R       SKE    LF
Sbjct: 631  YKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 663


>gi|449299733|gb|EMC95746.1| hypothetical protein BAUCODRAFT_501788 [Baudoinia compniacensis UAMH
            10762]
          Length = 813

 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 177/617 (28%), Positives = 296/617 (47%), Gaps = 107/617 (17%)

Query: 708  EKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTF 767
            E+ +  V I   I+  L+ HQV G++F++      I      D   GCI+A  MGLGKT 
Sbjct: 205  ERPKVPVVIDPRIAKVLRPHQVEGVKFLYRCTTGLI-----DDNAQGCIMADEMGLGKTL 259

Query: 768  QVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRVFMLEDV 822
            Q I  ++T ++ S + G   ++  +I  P +++ NW  E +KW   + + P  V      
Sbjct: 260  QCITLMWTLLKQSPDAGKGTIQKCVIACPSSLVRNWANELVKWLGQDAINPFAVD--GKA 317

Query: 823  SRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-D 875
            S++     + +W A  G      V ++ Y   R                    L + P  
Sbjct: 318  SKEELTMQMRQWAAATGRAVIRPVLIVSYETLR---------------LYVQELGNTPIG 362

Query: 876  ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
            +++CDE H +KN  + T +AL  +  ++R+ L+G+P+QN+L EY+ +++F   G+LG+  
Sbjct: 363  LMLCDEGHRLKNGESQTFEALNALNVKKRVILSGTPIQNDLSEYFALLNFANPGYLGTRQ 422

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFV 995
            +FR +++ PI  G+   ++  D++  N+R   L  ++  F+ R   +++ K LP K   V
Sbjct: 423  DFRKQYEIPILRGRDAGASDHDMQRGNERLSELLVKVNKFIIRRTNDILSKYLPVKYEHV 482

Query: 996  ITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
            +   L+P Q  LY  F+   ++      + S              L ++ NHP +L L  
Sbjct: 483  VFCNLAPFQLDLYNYFVKSPEIQSLLRGKGSQP------LKAIGLLKKLCNHPDLLNLPD 536

Query: 1053 -----DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
                 D+ +P   + +D+                       +G+N               
Sbjct: 537  DLPGCDELFPKEYETKDN-----------------------RGRN--------------- 558

Query: 1108 EHTYKELD--YSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQG 1164
                +E++  YSGKM +L  +L ++     DK ++ S    TLD+ E    +L R    G
Sbjct: 559  ----REVNPSYSGKMQVLDRMLRSIRHETTDKIVLISNYTQTLDVFE----RLCRSNSYG 610

Query: 1165 KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
             L        RLDG    S+RQKLV++FN+P  K     L+S++AG  G+NL  ANR+++
Sbjct: 611  CL--------RLDGTMNVSKRQKLVDKFNDPEGKEF-VFLLSSKAGGCGLNLIGANRLVL 661

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-Q 1283
             D  WNP  D QA+ R WR GQ K  F YR +A GT+EEK+++RQ  K+ L++ VVD  +
Sbjct: 662  FDPDWNPASDQQALARVWRDGQKKDCFVYRFIATGTIEEKVFQRQSHKQSLSSCVVDSAE 721

Query: 1284 QVHRTISKEEMLHLFEF 1300
             V R  + + +  LF++
Sbjct: 722  DVERHFTLDSLRELFQY 738


>gi|392867317|gb|EAS29452.2| DNA repair and recombination protein RAD26 [Coccidioides immitis RS]
          Length = 1213

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 184/629 (29%), Positives = 291/629 (46%), Gaps = 103/629 (16%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            RIP  I   L  +Q  G++++WE   Q +          G I+   MGLGKT QVIAFL 
Sbjct: 401  RIPGDIYPYLFDYQKTGVQWLWELYQQRV----------GGIIGDEMGLGKTIQVIAFLA 450

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRDRR 827
                S  L     ++V P  V+  W  EF +W P    PLRV +L        ++ ++ R
Sbjct: 451  GLHYSKKLDA-PIIVVCPPTVMKQWVNEFHRWWP----PLRVSILHTSGSGMINIKKESR 505

Query: 828  AE--LLAK-WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV------ 878
            AE  L ++ W       + G          + ++D ++       LQ    +L+      
Sbjct: 506  AEDTLTSEIWDPYRPTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIPVDWGC 565

Query: 879  --CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
               DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG+   
Sbjct: 566  AILDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVN 625

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFV 995
            FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  ++V   DLP KT  V
Sbjct: 626  FRNQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAA-DLPKKTEQV 684

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +  KL+ LQR  Y+ FL     +N+  +  + R+    G   L +I NHP +        
Sbjct: 685  LFCKLTKLQRAAYEAFLS----SNEMSAIMRGRRDVLFGVDILRKICNHPDL-------- 732

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
                   E  +  +  +YN                                    Y    
Sbjct: 733  ------PEHKTLSQKANYN------------------------------------YGNSA 750

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM ++  +L +  + G K+L+F+Q    LD++E ++  L            G ++ R
Sbjct: 751  KSGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSL-----------TGFNYRR 799

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T    RQ +V+ FN   +  +   L++T+ G LG+NL  A+RVII D  WNP+ DL
Sbjct: 800  MDGNTPIKVRQGMVDEFNN--DPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDL 857

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T    ++ 
Sbjct: 858  QARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMSDLH 917

Query: 1296 HLFEFGDDENPDPLTAVSKENGQGSSQNT 1324
             LF  GD+  P   + + +E G    +N+
Sbjct: 918  DLFTLGDN-GPTETSKMFQEAGVTFQENS 945


>gi|330840974|ref|XP_003292481.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum]
 gi|325077256|gb|EGC30980.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum]
          Length = 928

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 166/568 (29%), Positives = 273/568 (48%), Gaps = 81/568 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +SAKL+ HQ  G++F+++ ++      + G KG GCILA  MGLGK+ Q I  L+T ++ 
Sbjct: 271  LSAKLRPHQREGVKFVFDCLL----GFRGGFKGNGCILADDMGLGKSIQAITILWTLLKQ 326

Query: 780  VNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRA 836
               G  TA   +IV P +++ NW +E  KW    +  + +    + ++  RA+L      
Sbjct: 327  GPKGEPTAKKAVIVAPCSLVGNWCKELKKWLGDGINTVAI---GESTKTGRAKLSELEFG 383

Query: 837  KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQAL 896
               V +I Y   R               ++C     G  +++CDE H +KN    TT+A+
Sbjct: 384  PADVLIISYDQLRI-----------YCEDVCKISSIG--LVICDEGHRLKNAEIKTTKAV 430

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
              +   RR+ L+G+P+QN+L E+Y MV+FV  G L +   F+N +  PI   +   +T E
Sbjct: 431  SMIPTPRRVILSGTPIQNDLTEFYAMVNFVNPGLLKNVATFKNVYDAPIVASRSPEATEE 490

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            + KI  +RS  L      F+ R    V  + LPPK  +V+  KL+ LQ+ +Y+  +    
Sbjct: 491  ERKIGRERSAELSRLTGQFILRRTAIVNTQYLPPKVEYVVFCKLTDLQKSIYRHLI---- 546

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVV 1076
                    ++ + S FA           P I  L K           D  +   +D +V+
Sbjct: 547  --------KEAKDSCFASASGAL-----PLITTLKKLSNCAELVYLPDKEAPTEVDKSVL 593

Query: 1077 IGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC--SNMG 1134
                                F K+W   +          YS K++ +  +LT    S  G
Sbjct: 594  ------------------SLFPKEWNPKVFQPQ------YSSKLLFVDRLLTKIRDSKSG 629

Query: 1135 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 1194
            DK ++ S    TL+++                  +G  +++LDG T +++RQ+LV+ +N+
Sbjct: 630  DKVVIISNYTQTLEVLAIMCK------------TRGYAYFQLDGSTPNAKRQQLVDLYND 677

Query: 1195 PLNKRVKCT-LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
            P  KR +   L+S++AG +G+NL   N +++ D  WNP  D Q++ R WR GQ K V  Y
Sbjct: 678  P--KRPEFAFLLSSKAGGVGLNLIGGNHLVLFDADWNPANDAQSMARVWREGQKKVVSIY 735

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            R    GT+EEKI++RQ+TK+ L+  + +
Sbjct: 736  RTFTTGTIEEKIFQRQLTKQALSTSITE 763


>gi|389637459|ref|XP_003716366.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
 gi|22775414|dbj|BAC11858.1| recombinational repair protein [Magnaporthe grisea]
 gi|351642185|gb|EHA50047.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
          Length = 803

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 188/640 (29%), Positives = 306/640 (47%), Gaps = 104/640 (16%)

Query: 681  LDGDLSAGASIEVLGDAITGYIVNVVREKGE-EAVRIPSSISAKL----KAHQVVGIRFM 735
            LD  L   +  E+LG          +++K E E  R+P  I  +L    + HQ+ G++FM
Sbjct: 176  LDAPLVHKSLAEILG----------IKKKVEGEHPRVPVVIDPRLAKVLRPHQIEGVKFM 225

Query: 736  WENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR----SVNLGLRTALIVT 791
            +  +   I      +K  GCI+A  MGLGKT Q I  L+T ++    +    ++ A++  
Sbjct: 226  YRCVTGMI-----DEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPAIQKAIVAC 280

Query: 792  PVNVLHNWKQEFMKWRPSE-LKPLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYT 846
            P +++ NW  E +KW  ++ + P  +      E+++R  R   ++  RA    V ++ Y 
Sbjct: 281  PSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAISSGRAVTRPVIIVSYE 340

Query: 847  AFR-NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRI 905
              R N+   KH K                 +++CDE H +KN  + T  AL  +   RR+
Sbjct: 341  TLRLNVEELKHTKI---------------GLMLCDEGHRLKNGDSQTFTALNNLNVSRRV 385

Query: 906  ALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRS 965
             L+G+P+QN+L EY+ ++ F     LG+  EFR RF+ PI  G+  +++ ++    ++  
Sbjct: 386  ILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERVKGDECL 445

Query: 966  HILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRV 1022
              L   +  F+ R   +++ K LP K   V+   L+P Q  LY  F+   D+      + 
Sbjct: 446  KELLALVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGKG 505

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPR 1082
            S              L ++ NHP +L L+        +D   S +    DY   + ++ R
Sbjct: 506  SQP------LKAIGILKKLCNHPDLLNLS--------DDLPGSEAHWPSDY---VPKESR 548

Query: 1083 NMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFS 1141
              +  +          K W              YSGKM +L  +L  + ++  DK ++ S
Sbjct: 549  GRDREI----------KPW--------------YSGKMQVLDRMLARIRADTNDKIVLIS 584

Query: 1142 QSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVK 1201
                TLDL E    +L R    G L        RLDG    ++RQKLV++FN+P      
Sbjct: 585  NYTSTLDLFE----RLCRNRGYGSL--------RLDGTMNVTKRQKLVDKFNDPEGSEF- 631

Query: 1202 CTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTM 1261
              L+S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A G++
Sbjct: 632  VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSI 691

Query: 1262 EEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLHLFEF 1300
            EEKI++RQ  K+ L++ VVD  + V R  S + +  LF++
Sbjct: 692  EEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLKELFQY 731


>gi|451847747|gb|EMD61054.1| hypothetical protein COCSADRAFT_124441 [Cochliobolus sativus ND90Pr]
          Length = 1221

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 179/607 (29%), Positives = 282/607 (46%), Gaps = 101/607 (16%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
              RIP  I   L  +Q  G++++WE   Q++          G I+   MGLGKT Q ++F
Sbjct: 388  GFRIPGDIYPALFDYQKTGVQWLWELYSQNV----------GGIIGDEMGLGKTIQAVSF 437

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRD 825
            +   +    L  +  ++V P  V+  W  EF +W P+    LRV +L        D  R+
Sbjct: 438  V-AGLHYSRLLTKPVIVVCPATVMKQWVNEFHRWWPA----LRVSILHTSGSGMLDTRRE 492

Query: 826  RRAELLAKWRAKGG--VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV----- 878
             R E   + R  G     L G          K  +D ++       LQ   + L+     
Sbjct: 493  DRIEREMELRNYGDYDTTLTGAGKAAKKILEKVKRDGHVLVTTYSGLQTYAEFLIPTEWE 552

Query: 879  ---CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
                DE H I+N     T   K+++   RI L+G+P+QNNL E + + DFV    LG+  
Sbjct: 553  CAILDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLV 612

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVF 994
             FRN+F+ PI+ G + N+++ + +   + +  L + +  ++ QR   +V   DLP K   
Sbjct: 613  NFRNQFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKADVAT-DLPQKKEQ 671

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
            V+  KL+  QR+ Y+ FL     + D  S    ++    G   L +I NHP    LT+ K
Sbjct: 672  VLFCKLTKQQRQAYESFL----ASEDMRSIANGKRQMLYGVDYLRKICNHP---DLTEHK 724

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                                  + +KP                           + Y   
Sbjct: 725  ---------------------TLSKKP--------------------------GYDYGNA 737

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
            + SGKM ++ ++L++    G K+L+F+Q    LD+++ ++S+LP             +W 
Sbjct: 738  NKSGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFISQLP-----------DINWR 786

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            R+DG T   +RQ +V+ FN   N  V   L++T+ G LG+NL  ANRVII D  WNP+ D
Sbjct: 787  RMDGETPIKDRQNMVDEFNTDPNLHV--FLLTTKVGGLGVNLTGANRVIIYDPDWNPSTD 844

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            +QA  R+WR GQ + V  YRLM+ GT+EEKIY RQ+ K+ L  +V+   +  +T    ++
Sbjct: 845  IQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQTFQMSDL 904

Query: 1295 LHLFEFG 1301
              LF  G
Sbjct: 905  HDLFTLG 911


>gi|407041035|gb|EKE40490.1| DNA repair protein, putative [Entamoeba nuttalli P19]
          Length = 883

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 174/590 (29%), Positives = 276/590 (46%), Gaps = 83/590 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+  Y   V   K E AV +   +  KL+ HQ  G++FM++ ++     +K G KG GC
Sbjct: 246  DAVVLYQPTVTSRK-EVAVVVDPLLGLKLRPHQKAGVKFMYDCVMG----LKQGFKGNGC 300

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELK 812
            ILA  MGLGKT Q +  ++T +R    G    +  ++V P +++ NW+ EF KW  +   
Sbjct: 301  ILADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGNAAP 360

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
             +          D+    +    A+  + +I Y   R      H+      +        
Sbjct: 361  RVVGVSCSGAKTDQAISDMDFGYAE--IMVISYDQLRI-----HIDKIEKIK-------- 405

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
            G  +L+CDE H +KN    ++QA+ +V  +RR+ L+G+P+QN L E+Y MV FV    LG
Sbjct: 406  GWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNPDVLG 465

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            S   F+  ++ PI   +  + T E+    NQRS  L    K F+ R    V +K LPPK 
Sbjct: 466  SLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTSKVNQKYLPPKV 525

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
              V+   L+PLQ+++Y     L    N     ++ +   F    AL ++ NHP ++Q   
Sbjct: 526  QHVVFCSLTPLQKKIYTALCTLK---NKPKGKDEKKSCQFQILTALKKVSNHPWLIQ-DF 581

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 1112
             K +P           E +D  +  GE                      W+         
Sbjct: 582  VKTFP-----------EVLDGVLPKGEA--------------------LWD--------- 601

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
             ++ SGK   L  +L       +K ++ S    TL+ I  +  K   P            
Sbjct: 602  -MELSGKTAFLAKLLAFLRKHKEKIVIVSNYTETLNFIAHHCKKCGYP------------ 648

Query: 1173 WYRLDGRTESSERQKLVERFNEP-LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
            + +LDG   +++R ++V RFN P L++ +   L+S++AG  G+NL     +++ D  WNP
Sbjct: 649  YIQLDGSVAATKRTQMVNRFNNPELDEFI--FLLSSKAGGCGLNLVGGANLVMFDPDWNP 706

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
              D QA+ R WR GQ K    YR ++ GT+EEK+Y+RQ+ K  LA +VV+
Sbjct: 707  ANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIKKLELAGKVVE 756


>gi|426200084|gb|EKV50008.1| hypothetical protein AGABI2DRAFT_183150 [Agaricus bisporus var.
            bisporus H97]
          Length = 820

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 188/613 (30%), Positives = 290/613 (47%), Gaps = 102/613 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +S  L+ HQV G++F+++     I      D   GCI+A  MGLGKT Q IA +
Sbjct: 217  VVIDPRLSKVLRPHQVEGVQFLYKCTTGMIV-----DNQYGCIMADEMGLGKTLQCIALM 271

Query: 774  YTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSE-LKPLRVFMLEDVSRDRRA 828
            +T ++ S + G  T    +IV P +++ NW  E +KW   + + PL V      ++  +A
Sbjct: 272  WTLLKQSPHAGKPTIEKCIIVCPSSLVKNWANELIKWLGKDAVTPLAV-----DNKGGKA 326

Query: 829  ELLAK---WRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
            ELL K   W +  G      V +I Y   R+++               H       +L+C
Sbjct: 327  ELLPKLQRWVSARGRNVTQPVMIISYETLRSVT--------------AHLASCTIGLLLC 372

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN+   T QAL  +  +RR+ LTG+P+QN+L EY+ +++F    FLGS ++FR 
Sbjct: 373  DEGHRLKNSDNQTFQALTSLDVKRRVILTGTPVQNDLSEYFSLLNFANPNFLGSKNDFRK 432

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
             F++ I  G+   ++ E+     ++   L   +  F+ R   +++ K LP K   V+   
Sbjct: 433  NFEHAIIRGRDALASDENKAQSEKKLKELGSLVMKFIIRRTNDLLSKYLPVKYEHVVFCH 492

Query: 1000 LSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD-KG 1055
            LS  Q  LY+ F+   D+        S              L ++ NHP +L L  + KG
Sbjct: 493  LSDFQLSLYRLFITSPDIKALLRGTESQP------LKAINLLKKLCNHPDLLDLPSELKG 546

Query: 1056 ----YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                 P              D N  +                    + +W          
Sbjct: 547  SENLLPPDYTGTKGGGGRGGDRNPAV--------------------RSEW---------- 576

Query: 1112 KELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
                  GK ++L   L  + +   DK ++ S    TLDL E    KL R  K G      
Sbjct: 577  -----GGKFIVLERFLHRIRAESNDKIVLISNYTQTLDLFE----KLCRNKKYG------ 621

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
              ++RLDG+   ++RQKLV++FN+P N +    L+S++AG  GINL  ANR+I+ D  WN
Sbjct: 622  --FFRLDGKMTINKRQKLVDQFNDP-NGKEFIFLLSSKAGGCGINLIGANRLILFDPDWN 678

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTI 1289
            P  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K+ L++ VVD ++   R  
Sbjct: 679  PAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQALSSAVVDEKEDTERHF 738

Query: 1290 SKEEMLHLFEFGD 1302
            S + +  LF F +
Sbjct: 739  SVDALRQLFTFNE 751


>gi|405120211|gb|AFR94982.1| DNA supercoiling [Cryptococcus neoformans var. grubii H99]
          Length = 818

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 191/632 (30%), Positives = 298/632 (47%), Gaps = 109/632 (17%)

Query: 702  IVNVVRE-KGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCI 756
            I+ +V E K ++ V++P  I  +L    + HQ+ G++F++      I      D   GCI
Sbjct: 206  ILGIVDERKNKQVVKVPVVIDPRLSKVLRPHQIEGVKFLYRCTTGLI-----ADGAWGCI 260

Query: 757  LAHTMGLGKTFQVIAFLYTAMRSVNLGLRT----ALIVTPVNVLHNWKQEFMKWRPS-EL 811
            +A  MGLGKT Q IA L+T ++   +  +      +I  P +++ NW  E +KW  S  +
Sbjct: 261  MADEMGLGKTLQCIALLWTLLKQSPVAGKPTCEKVIIACPTSLVGNWANELIKWLGSGAV 320

Query: 812  KPLRVFMLEDVSRDRRAELLA---KWRAKGG------VFLIGYTAFRNLSFGKHVKDRNM 862
             P+ V       +  +AEL+    +W    G      V ++ Y   R L           
Sbjct: 321  NPMVV-----DGKGGKAELIPAVRRWVQAHGRNVTLPVMIVSYETLRTL----------- 364

Query: 863  AREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
             +E   + + G  +L+ DE H +KN    T QAL  +K QRR+ LTG+P+QN+L EY+ +
Sbjct: 365  -QEELASCEIG--LLLADEGHRLKNAETLTFQALTSLKVQRRVILTGTPIQNDLSEYFAL 421

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
            ++F    +LGS  +F+  F++ I  G+  ++T ++    + +   L   +  F+ R   +
Sbjct: 422  LNFANPEYLGSKLDFKKNFESKILRGRDADATEKEKLESDAKLKELGGLVSKFIIRRTND 481

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALA 1039
            ++ K LP K   V+  + SPLQ  LY  F+   D+      + S              L 
Sbjct: 482  LLSKYLPVKYEHVVFCRPSPLQASLYNLFVTSKDVQRLLRGKDSQP------LKAIGLLR 535

Query: 1040 QIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK 1099
            ++ NHP +L L            ED    E +            + D   GK  D     
Sbjct: 536  KLVNHPDLLNL-----------PEDLPGSETL------------LPDGYNGKGRDRTVN- 571

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLP 1158
                            YSGK V+L  +L  +  +  DK ++ S +  TLDL+E    KL 
Sbjct: 572  --------------CQYSGKFVVLERMLDHIKHHTNDKIVLISNATQTLDLME----KLC 613

Query: 1159 RPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1218
            R  + G L        RLDG     +R K+V +FN+P +K     L+S++AG  GINL  
Sbjct: 614  RGKRYGYL--------RLDGSMSVPKRSKIVAQFNQPESKEF-VFLLSSKAGGCGINLIG 664

Query: 1219 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 1278
            ANR+++ D  WNP  D QA+ R WR GQ K  F YR    GT+EEKI++RQ  K+ L+A 
Sbjct: 665  ANRLVLFDPDWNPASDQQALARVWRDGQKKECFVYRFQTTGTIEEKIFQRQCQKQNLSAC 724

Query: 1279 VVDRQQ-VHRTISKEEMLHLFEFGDDENPDPL 1309
            VVD  +   R  ++ ++  LF+F    NP+ L
Sbjct: 725  VVDEAEDTARHFTQGDLRQLFKF----NPETL 752


>gi|336271287|ref|XP_003350402.1| hypothetical protein SMAC_02114 [Sordaria macrospora k-hell]
 gi|380090924|emb|CCC11457.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1172

 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 186/618 (30%), Positives = 283/618 (45%), Gaps = 116/618 (18%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  +++P  I   L  +Q  G++++ E   Q +          G I+   MGLGKT Q+I
Sbjct: 380  ENGLKLPGDIYPSLFDYQKTGVQWLAELYAQQV----------GGIVGDEMGLGKTVQLI 429

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR------ 824
            +F+     S  L  +  ++V P  VL  W  EF +W P    PLRV +L           
Sbjct: 430  SFVAALHYSRKLD-KPVIVVAPATVLRQWVNEFHRWWP----PLRVSILHSSGSGMLNVR 484

Query: 825  -----DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL-- 877
                 D R +   K + K           R +  G HV     A      LQ   D+L  
Sbjct: 485  NEGELDDREDDYGKRKPKKSSQAAKRIVERVVKHG-HVLVTTYA-----GLQTYGDVLIP 538

Query: 878  ------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                  V DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DF+    L
Sbjct: 539  VDWGYAVLDEGHKIRNPNTAITIYCKELRTPNRVILSGTPMQNNLTELWSLFDFIYPMRL 598

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPP 990
            G+   FRN+F+ PI+ G + N+T+  +    + +  L E +  ++ QR+ ++V   DLP 
Sbjct: 599  GTLVAFRNQFEIPIKLGGYANATNLQIMTAQKCAETLKETISPYLLQRLKVDVAA-DLPK 657

Query: 991  KTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGI 1047
            K+  V+  KLS  QR  Y+ FL   D+    N      + R+S + G   L +I NHP +
Sbjct: 658  KSEQVLFCKLSKPQREAYELFLKSDDMTAILN------RTRQSLY-GIDILRKICNHPDL 710

Query: 1048 LQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLH 1107
            L                                PR          DD  +Q         
Sbjct: 711  LD-------------------------------PR--------LKDDPSYQ--------- 722

Query: 1108 EHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLW 1167
               +   + SGKM ++  +L M   +G K+L+F Q    LD+IE ++ +           
Sbjct: 723  ---WGSTNKSGKMAVVKSLLPMWKRLGHKTLLFCQGTQMLDIIEAFVRR----------- 768

Query: 1168 KKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
            + G ++ R+DG+T   +RQ LV++FN   N  +   L++T+ G LG NL  ANRVII D 
Sbjct: 769  QDGINYLRMDGKTPVKDRQTLVDQFNN--NPDLHIFLLTTKVGGLGTNLTGANRVIIFDP 826

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
             WNP+ D+QA  RAWR GQ K V  YRLM  GT+EEKIY RQ+ K+ L+ +V+   +   
Sbjct: 827  DWNPSTDVQARERAWRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQT 886

Query: 1288 TISKEEMLHLFEFGDDEN 1305
            + +  ++  LF     E+
Sbjct: 887  SFNLNDLHDLFSLSSYED 904


>gi|426219863|ref|XP_004004137.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Ovis aries]
          Length = 712

 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 192/636 (30%), Positives = 289/636 (45%), Gaps = 125/636 (19%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G +F++ + IQ          G GCIL   MGLGKT QVI+FL  
Sbjct: 127  IPYTINRYLRDYQREGAQFLYGHFIQ----------GRGCILGDDMGLGKTVQVISFLAA 176

Query: 776  AM------------------RSV-----NLGLRTALIVTPVNVLHNWKQEFMKWRPSELK 812
             +                  R++     +   +  LIV P++VL+NWK E   W      
Sbjct: 177  VLGKKGTREDIENNMPEFLLRNMKKDPPSTAKKMFLIVAPLSVLYNWKDELDTW-----G 231

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
              RV +L    +D  +EL+   + K  + L  Y   R            +  +  ++L+ 
Sbjct: 232  YFRVTILHGNKKD--SELIRVKQRKCEIALTTYETLR------------LCLDELNSLEW 277

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G LG
Sbjct: 278  SA--IIVDEAHRIKNPKARVTEIMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLG 335

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            S   F+ +F +P+E+GQ   +T  ++    +    L  ++ G+  R    ++K  LP K 
Sbjct: 336  SRIHFKKQFSDPVEHGQRHTATKRELATGRKAMQRLARKMSGWFLRRTKTLIKDQLPKKE 395

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGF-------------TNDRVSN---------EKIRKS 1030
              ++   L+  Q+ +Y+  L+                 +  R  N         E ++  
Sbjct: 396  DRMVYCSLTDFQKAVYQTVLETEDVSLILQSSEPCTCSSGQRRRNCCYKTNSQGETVKTL 455

Query: 1031 FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNV---VIGEKPRNMNDF 1087
            +F+    L ++ NH  +LQ            A  S   E +   +   V    P    DF
Sbjct: 456  YFSYLAVLQKVANHVALLQ-----------TASTSKQQETLIKRICDQVFSRFP----DF 500

Query: 1088 LQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
            +Q   D  F             T  +  YSGKM +L  +L  C    DK L+FS S   L
Sbjct: 501  VQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNKDKVLLFSFSTKLL 548

Query: 1148 DLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
            D+++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST
Sbjct: 549  DVLQQY------------CMASGLDYRRLDGSTKSEERIKIVKEFNS--TQDVNICLVST 594

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
             AG LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y 
Sbjct: 595  MAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYL 654

Query: 1268 RQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            RQV K+ L   VV  +   R       SKE    LF
Sbjct: 655  RQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 690


>gi|119178020|ref|XP_001240720.1| hypothetical protein CIMG_07883 [Coccidioides immitis RS]
          Length = 1198

 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 184/629 (29%), Positives = 291/629 (46%), Gaps = 103/629 (16%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            RIP  I   L  +Q  G++++WE   Q +          G I+   MGLGKT QVIAFL 
Sbjct: 386  RIPGDIYPYLFDYQKTGVQWLWELYQQRV----------GGIIGDEMGLGKTIQVIAFLA 435

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRDRR 827
                S  L     ++V P  V+  W  EF +W P    PLRV +L        ++ ++ R
Sbjct: 436  GLHYSKKLDA-PIIVVCPPTVMKQWVNEFHRWWP----PLRVSILHTSGSGMINIKKESR 490

Query: 828  AE--LLAK-WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV------ 878
            AE  L ++ W       + G          + ++D ++       LQ    +L+      
Sbjct: 491  AEDTLTSEIWDPYRPTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIPVDWGC 550

Query: 879  --CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
               DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG+   
Sbjct: 551  AILDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVN 610

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFV 995
            FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  ++V   DLP KT  V
Sbjct: 611  FRNQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAA-DLPKKTEQV 669

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +  KL+ LQR  Y+ FL     +N+  +  + R+    G   L +I NHP +        
Sbjct: 670  LFCKLTKLQRAAYEAFLS----SNEMSAIMRGRRDVLFGVDILRKICNHPDL-------- 717

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
                   E  +  +  +YN                                    Y    
Sbjct: 718  ------PEHKTLSQKANYN------------------------------------YGNSA 735

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM ++  +L +  + G K+L+F+Q    LD++E ++  L            G ++ R
Sbjct: 736  KSGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSL-----------TGFNYRR 784

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T    RQ +V+ FN   +  +   L++T+ G LG+NL  A+RVII D  WNP+ DL
Sbjct: 785  MDGNTPIKVRQGMVDEFNN--DPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDL 842

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T    ++ 
Sbjct: 843  QARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMSDLH 902

Query: 1296 HLFEFGDDENPDPLTAVSKENGQGSSQNT 1324
             LF  GD+  P   + + +E G    +N+
Sbjct: 903  DLFTLGDN-GPTETSKMFQEAGVTFQENS 930


>gi|397500919|ref|XP_003821150.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination protein
            RAD54B [Pan paniscus]
          Length = 910

 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 186/605 (30%), Positives = 299/605 (49%), Gaps = 97/605 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 286  VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGSCGAILADEMGLGKTLQCISLI 340

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP ++++NWK+EF KW  SE   +++F    V +D + E
Sbjct: 341  WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 396  EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 440  AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    ++ K LPPK   V+  +   LQ  LY
Sbjct: 500  REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELY 559

Query: 1009 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            ++ L+       L G   +                AL ++ NHP +L       + S ++
Sbjct: 560  RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604

Query: 1062 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
             E SS+    +E   Y  ++   P + N  L       F +K+                S
Sbjct: 605  KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 641

Query: 1118 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
            GK+ +L  +L +   +   +K ++ S    TL+++            Q    + G  + R
Sbjct: 642  GKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 689

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG+T  S+RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+
Sbjct: 690  LDGQTPISQRQQIVDGFNSQ-HSSFFXFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 748

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 1293
            QA+ R WR GQ  PV  YRL+  GT+EEKIY+RQ++K+GL   VVD  +   H   S EE
Sbjct: 749  QAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEE 808

Query: 1294 MLHLF 1298
            + +LF
Sbjct: 809  LKNLF 813


>gi|71755407|ref|XP_828618.1| DNA repair/recombination protein RAD54 [Trypanosoma brucei TREU927]
 gi|70834004|gb|EAN79506.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
            brucei brucei strain 927/4 GUTat10.1]
          Length = 1037

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 195/660 (29%), Positives = 316/660 (47%), Gaps = 103/660 (15%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLG---CILAHTMGLGKTFQVIAFLYTA 776
            I  KL+ HQ +G++F+++ I        +G +  G    ILA  MGLGKT Q +A +YT 
Sbjct: 360  IGDKLRPHQRIGVKFLFDCI--------TGQRMPGYHGAILADEMGLGKTIQTVATVYTC 411

Query: 777  MRSVNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK 833
            ++    G+ TA   LIVTP +++ NW  EF KW    +  ++   + + S  +   ++++
Sbjct: 412  LKQGRYGVPTARKCLIVTPSSLVKNWCNEFDKWL--GVGAVKYLSISE-STPKGDRIISR 468

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
            +   G V +I Y   R     K++   +  + +        +++VCDE H +KN    TT
Sbjct: 469  FDGDGDVLVISYDQLR-----KYISRISTLKSV--------ELVVCDEGHKLKNAEVKTT 515

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            +A+  +  + RI L+G+P+QN+L E++ MV FV  G LG+   F   F+ P+  G+  + 
Sbjct: 516  KAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGTRDVFGRVFEEPVTLGRDPDC 575

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
                  +   R+H L    + F+ R   ++ +  LPPK    + V+L   QR  Y++   
Sbjct: 576  PEHLRMLGADRAHYLSTLTQRFILRRTQSINESYLPPKVDLTVFVRLGEKQREAYEKISA 635

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
            +          E  + +      +L ++ NH  +                ++    N D 
Sbjct: 636  I---------VESSQCTPLVLISSLRKLCNHMDLFH--------------EAVVSSNGDQ 672

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNM 1133
                G  P+++              K +    L +    ++ +   + L+LD   +CSN 
Sbjct: 673  KGKGGGIPKSV------------LPKGYKVGTLSQEVGSKMQF---VSLMLD--ELCSNG 715

Query: 1134 G-DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK-DWYRLDGRTESSERQKLVER 1191
              DK ++ S    TLD+I               + K  K  +++LDG      RQ++V+R
Sbjct: 716  DHDKLVIVSNFTQTLDVI-------------AAMCKTKKISFFQLDGSMPIKRRQEVVDR 762

Query: 1192 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1251
            FN P N +    L+S++AG +G+NL  ANR+I+ D  WNP  D QA+ R WR GQ K VF
Sbjct: 763  FNVP-NSQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVF 821

Query: 1252 AYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ---QVHRTISKEEMLHLFEF---GDDEN 1305
             YRL++ G++EEKIY+RQV+K+GL+A VVD Q   + H T+  EE+  LF F    D E 
Sbjct: 822  IYRLLSTGSIEEKIYQRQVSKQGLSANVVDMQTDSKQHFTL--EELRSLFRFRSDTDSET 879

Query: 1306 PDPLTAVSKE---NGQGSSQNTNCALK-HKLPLSHEGCSDK----LMESLLG-KHHPRCA 1356
             D L   S E   N  G   +    LK  + P+     + K     M+ L G +H  +CA
Sbjct: 880  HDLLHCTSCEAVMNSGGGRASGRARLKEQEAPMKFRPVTVKKSGPRMDELKGWRHFSQCA 939


>gi|261334500|emb|CBH17494.1| DNA repair and recombination protein RAD54,putative [Trypanosoma
            brucei gambiense DAL972]
          Length = 1037

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 195/660 (29%), Positives = 316/660 (47%), Gaps = 103/660 (15%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLG---CILAHTMGLGKTFQVIAFLYTA 776
            I  KL+ HQ +G++F+++ I        +G +  G    ILA  MGLGKT Q +A +YT 
Sbjct: 360  IGDKLRPHQRIGVKFLFDCI--------TGQRMPGYHGAILADEMGLGKTIQTVATVYTC 411

Query: 777  MRSVNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK 833
            ++    G+ TA   LIVTP +++ NW  EF KW    +  ++   + + S  +   ++++
Sbjct: 412  LKQGRYGVPTARKCLIVTPSSLVKNWCNEFDKWL--GVGAVKYLSISE-STPKGDRIISR 468

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
            +   G V +I Y   R     K++   +  + +        +++VCDE H +KN    TT
Sbjct: 469  FDGDGDVLVISYDQLR-----KYISRISTLKSV--------ELVVCDEGHKLKNAEVKTT 515

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            +A+  +  + RI L+G+P+QN+L E++ MV FV  G LG+   F   F+ P+  G+  + 
Sbjct: 516  KAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGTRDVFGRVFEEPVTLGRDPDC 575

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
                  +   R+H L    + F+ R   ++ +  LPPK    + V+L   QR  Y++   
Sbjct: 576  PEHLRMLGADRAHYLSTLTQRFILRRTQSINESYLPPKVDLTVFVRLGEKQREAYEKISA 635

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
            +          E  + +      +L ++ NH  +                ++    N D 
Sbjct: 636  I---------VESSQCTPLVLISSLRKLCNHMDLFH--------------EAVVSSNGDQ 672

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNM 1133
                G  P+++              K +    L +    ++ +   + L+LD   +CSN 
Sbjct: 673  KGKGGGIPKSV------------LPKGYKVGTLSQEVGSKMQF---VSLMLD--ELCSNG 715

Query: 1134 G-DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK-DWYRLDGRTESSERQKLVER 1191
              DK ++ S    TLD+I               + K  K  +++LDG      RQ++V+R
Sbjct: 716  DHDKLVIVSNFTQTLDVI-------------AAMCKTKKISFFQLDGSMPIKRRQEVVDR 762

Query: 1192 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1251
            FN P N +    L+S++AG +G+NL  ANR+I+ D  WNP  D QA+ R WR GQ K VF
Sbjct: 763  FNVP-NSQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVF 821

Query: 1252 AYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ---QVHRTISKEEMLHLFEF---GDDEN 1305
             YRL++ G++EEKIY+RQV+K+GL+A VVD Q   + H T+  EE+  LF F    D E 
Sbjct: 822  IYRLLSTGSIEEKIYQRQVSKQGLSANVVDMQTDSKQHFTL--EELRSLFRFRSDTDSET 879

Query: 1306 PDPLTAVSKE---NGQGSSQNTNCALK-HKLPLSHEGCSDK----LMESLLG-KHHPRCA 1356
             D L   S E   N  G   +    LK  + P+     + K     M+ L G +H  +CA
Sbjct: 880  HDLLHCTSCEAVMNSGGGRASGRARLKEQEAPMKFRPVTVKKSGPRMDELKGWRHFSQCA 939


>gi|440300865|gb|ELP93312.1| lymphoid-specific helicase, putative [Entamoeba invadens IP1]
          Length = 918

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 180/627 (28%), Positives = 298/627 (47%), Gaps = 53/627 (8%)

Query: 709  KGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ 768
            +GE A+ +   +  KL+ HQ  G++FM++ ++     +K+G +G GCILA  MGLGKT Q
Sbjct: 253  RGEVAIVVDPILGLKLRPHQKAGVKFMFDCVMG----LKTGFRGNGCILADGMGLGKTIQ 308

Query: 769  VIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
             ++ ++T ++    G    +  ++V P +++ NW+ EF KW     K  RV  +    + 
Sbjct: 309  AVSLMFTLLKQGINGEPTCKKVMVVAPSSLVGNWENEFKKWLGD--KAPRVVAIASSGKK 366

Query: 826  RRAELLAKWRAKGGVFLIGYTAFR-NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHM 884
                +         V +I Y   R ++   + +KD  M              +VCDE H 
Sbjct: 367  ADQAMSDMEYGYAEVLVISYDQLRIHIDKIELIKDWGM--------------IVCDEGHR 412

Query: 885  IKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNP 944
            +KN    ++QA+ +V  +RR+ L+G+P+QN L E+Y MV FV    L     FR  F+ P
Sbjct: 413  LKNADIKSSQAVSRVPTRRRVILSGTPIQNELGEFYAMVSFVNPNVLSEISTFRRIFEEP 472

Query: 945  IENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQ 1004
            I   +  + T E  K  N+RS  L    K F+ R    V +K LPPK   V+   L+PLQ
Sbjct: 473  ILISRQADCTPEQKKTGNERSKELTRLTKLFILRRTSKVNQKYLPPKVQHVVFCALTPLQ 532

Query: 1005 RRLYKRFLDLHGFTNDRVSNEK-IRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAE 1063
            + +Y+R +D +  T D    ++ ++       +  +   +     +    +G    E  E
Sbjct: 533  KMIYQRLIDYYNTTRDEAKKKRALQPKEKKPKREKSTTPDLSEEKKGKAKRGRKKGETVE 592

Query: 1064 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
             S   + +     +   P  + DF++       F +     L       +++ SGK   L
Sbjct: 593  GSCQFQILTALKKVSNHPWLIQDFVKT------FPEVLSGILPKGEALYDMNLSGKTAFL 646

Query: 1124 LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
             ++L       +K ++ S    TL+ I  Y  K   P            + +LDG   + 
Sbjct: 647  AELLEYLRRHKEKIVIVSNYTETLNFIAHYCKKCGYP------------FIQLDGSVPAQ 694

Query: 1184 ERQKLVERFNEP-LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1242
            +R ++V RFN+P L++ +   L+S++AG  G+NL     +++ D  WNP  D QA+ R W
Sbjct: 695  KRTQMVTRFNDPSLDEFI--FLLSSKAGGCGLNLIGGANLVMFDPDWNPANDEQAMGRVW 752

Query: 1243 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR--TISKEEMLHLFEF 1300
            R GQ K    YR ++ GT+EEK+Y+RQ+ K  LA +VV+  + +   T   +E+  L +F
Sbjct: 753  RDGQKKKCHIYRTLSSGTVEEKMYQRQIKKLELAGKVVEGGEENEESTFDDKELKELCQF 812

Query: 1301 GDD--ENPDPLTAVSKENGQGSSQNTN 1325
             D   E  D L       G GS +N +
Sbjct: 813  KDTICETHDLLGCTC---GAGSRKNID 836


>gi|402898076|ref|XP_003912058.1| PREDICTED: uncharacterized protein LOC101017805 [Papio anubis]
          Length = 1649

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 184/634 (29%), Positives = 283/634 (44%), Gaps = 120/634 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +++  L+ +Q  G +F++ + I           G GCIL   MGLGKT QV++FL  
Sbjct: 217  IPYTVNRYLRDYQREGAQFLYGHYIH----------GRGCILGDDMGLGKTVQVMSFLAA 266

Query: 776  AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                  RS+      +   +  LIV P++VL+NWK E   W     
Sbjct: 267  VLHKKGTREDIENNMPEFLLRSMKKEPPSSTAKKMFLIVAPLSVLYNWKDELDTW----- 321

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  + L  Y   R            +  +  ++L+
Sbjct: 322  GYFRVTILHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 367

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 368  WS--AVIVDEAHRIKNPKARITEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 425

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            G+   F+ +F +P+E+GQ   +T  ++    +    L  ++ G+  R    ++K  LP K
Sbjct: 426  GTRTCFKKQFSDPVEHGQRHTATKRELATGRKAMQRLARRMSGWFLRRTKALIKDQLPKK 485

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 486  EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKT 545

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
             + +    L ++ NH  +LQ            A  +S  +      +  +      DF+Q
Sbjct: 546  LYLSYLTVLQKVANHVALLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 593

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD+
Sbjct: 594  KSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 641

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            ++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST A
Sbjct: 642  LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTMA 687

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQ
Sbjct: 688  GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 747

Query: 1270 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            V K+ L   VV  +   R       SKE    LF
Sbjct: 748  VYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 781


>gi|410077739|ref|XP_003956451.1| hypothetical protein KAFR_0C03240 [Kazachstania africana CBS 2517]
 gi|372463035|emb|CCF57316.1| hypothetical protein KAFR_0C03240 [Kazachstania africana CBS 2517]
          Length = 913

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 181/570 (31%), Positives = 275/570 (48%), Gaps = 92/570 (16%)

Query: 754  GCILAHTMGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PS 809
            GCI+A  MGLGKT Q IA L+T +R    G   +   +IV P ++++NW  E +KW  P 
Sbjct: 347  GCIMADEMGLGKTLQCIALLWTLLRQGPQGKGLIDKCIIVCPSSLVNNWANELVKWLGPG 406

Query: 810  ELKPLRV----FMLEDVSRDRRAELLAKW-RAKG-----GVFLIGY-TAFRNLSFGKHVK 858
             L PL +      + D      A+ +  W +AKG      V +I Y T  RN+     +K
Sbjct: 407  TLTPLAIDGKKSSITDAGNASVADAIRSWAQAKGRNIVKPVLIISYETLRRNVD---QLK 463

Query: 859  DRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLME 918
            + N+             +++ DE H +KN  + T  AL  + C RR+ L+G+P+QN+L E
Sbjct: 464  NSNVG------------LMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSE 511

Query: 919  YYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQR 978
            Y+ ++ F   G LGS  +FR  ++ PI  G+   +T +++K    +   L   +  F+ R
Sbjct: 512  YFALLSFSNPGLLGSRAQFRRNYELPILRGRDAEATDKEIKKGEGQLEKLSNIVSKFIIR 571

Query: 979  MDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGY 1035
               +++ K LP K   VI V L P Q+ LY++ L   D+          + ++       
Sbjct: 572  RTNDILSKYLPCKYEHVIFVNLKPFQKSLYQQLLKSRDVKKLVKGMGGPQPLK-----AI 626

Query: 1036 QALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDG 1095
              L ++ NHP +L   K          E  S+D                           
Sbjct: 627  GLLKKLCNHPALLDFEK----------ELESAD--------------------------- 649

Query: 1096 FFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYL 1154
            F   D + DL +     +  YSGK  +L   L  + +   DK ++ S    TLDLIE   
Sbjct: 650  FELPDVFRDLHNREVQPQ--YSGKFAILERFLHKINAESDDKIVLISNYTQTLDLIE--- 704

Query: 1155 SKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGI 1214
             ++ R  + G +        RLDG    ++RQ LV+RFN+P  +     L+S++AG  GI
Sbjct: 705  -RMCRRKQYGVI--------RLDGTMSINKRQTLVDRFNDPEGQEF-IFLLSSKAGGCGI 754

Query: 1215 NLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEG 1274
            NL  ANR+I++D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKIY+RQ  K  
Sbjct: 755  NLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIYQRQSMKMS 814

Query: 1275 LAARVVD-RQQVHRTISKEEMLHLFEFGDD 1303
            L++ VVD ++ V R  S   +  LF+  +D
Sbjct: 815  LSSCVVDAKEDVERLFSSGNLRKLFQLDED 844


>gi|340058717|emb|CCC53077.1| putative DNA repair and recombination protein RAD54 [Trypanosoma
            vivax Y486]
          Length = 1024

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 178/600 (29%), Positives = 298/600 (49%), Gaps = 88/600 (14%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLG---CILAHTMGLGKTFQV 769
            +V +   I  KL+ HQ VG++F+++ I        +G++  G    ILA  MGLGKT Q 
Sbjct: 346  SVVVDPIIGDKLRPHQRVGVKFLFDCI--------TGERMPGYHGAILADEMGLGKTIQT 397

Query: 770  IAFLYTAMRSVNLGL---RTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
            +A +YT +R    G    R ALIVTP +++ NW  EF KW       ++ F + + S  +
Sbjct: 398  VATVYTCLRQGKHGTPTARKALIVTPSSLVKNWCNEFDKWLGQ--GAVKYFAISE-STPK 454

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIK 886
               +++++  +G V +I Y   R     K++   +  + +        +++VCDE H +K
Sbjct: 455  GDRIISRFEGEGDVLVISYDQLR-----KYISRISTIKSV--------ELVVCDEGHRLK 501

Query: 887  NTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIE 946
            N    TT+++  +  + RI L+G+P+QN+L E++ MV FV  G LGS   F   F+ P+ 
Sbjct: 502  NAEVKTTKSVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVT 561

Query: 947  NGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRR 1006
             G+  +       +   R+H L    + F+ R   ++ +  LPPK    + V+L  +QR 
Sbjct: 562  LGRDPDCPEHLRSLGADRAHYLSNLTQRFILRRTQSINESYLPPKVDLTVFVRLGAMQRT 621

Query: 1007 LYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSS 1066
             Y+   +L       V + +          AL ++ NH   + L  +    SR++ +   
Sbjct: 622  TYESLANL-------VDSSQCTPLVL--ISALRKLCNH---MDLFHEAVLNSRKEGDKQQ 669

Query: 1067 SDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
                          P+++              K +    L E T  ++ +   + L+LD 
Sbjct: 670  G------------IPKSV------------LPKGFKLGTLSEATGSKMQF---VSLMLDE 702

Query: 1127 LTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQ 1186
            L    +  DK ++ S    TLD+I                  K   +++LDG     +RQ
Sbjct: 703  LRKNGDR-DKLVIVSNFTQTLDVIAVMCR------------AKNVSFFQLDGSMPIKKRQ 749

Query: 1187 KLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQ 1246
            ++V+RFN P ++ +   L+S++AG +G+NL  ANR+I+ D  WNP  D QA+ R WR GQ
Sbjct: 750  EVVDRFNIPGSQEI-VFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQ 808

Query: 1247 TKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ---QVHRTISKEEMLHLFEFGDD 1303
             K V+ YRL++ G++EEKIY+RQV+K+GL+A VVD +   + H T+  +E+  LF +  D
Sbjct: 809  KKRVYIYRLLSTGSIEEKIYQRQVSKQGLSANVVDMKTDSKQHFTL--DELRSLFRYRGD 866


>gi|149029137|gb|EDL84422.1| similar to putative repair and recombination helicase RAD26L
            (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 708

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 190/638 (29%), Positives = 286/638 (44%), Gaps = 119/638 (18%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   IP +I+  L+ +Q  G +F++ + I          KG GCIL   MGLGKT QVI
Sbjct: 118  EDGDSIPYTINRYLRDYQREGAQFLYRHYI----------KGRGCILGDDMGLGKTIQVI 167

Query: 771  AFLYTAMR-----------------------SVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            +FL   +                        S +   +  LIV P++VL+NWK E   W 
Sbjct: 168  SFLAAVLHKKGTREDIENNMPEFLLKSMKKESSSTARKMFLIVAPLSVLYNWKDELDTW- 226

Query: 808  PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   RV +L    +D   EL    + K  + L  Y   R            +  E  
Sbjct: 227  ----GYFRVTVLHGSKKDN--ELTRLKQRKCEIALTTYETLR------------LCLEEL 268

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            ++L+     ++ DEAH I+N  A  T+ +K VKC+ RI LTG+ LQNN+ E +C++D+  
Sbjct: 269  NSLEWSA--IIVDEAHRIRNPNARVTEVMKAVKCKVRIGLTGTILQNNMKELWCVMDWAV 326

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
             G LGS   F+ +F +P+E+GQ   +T  ++    +  H L +++ G+  R    ++K  
Sbjct: 327  PGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGYFLRRTKTLIKGQ 386

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNE---------------------- 1025
            LP K   ++   L+  Q+ +Y+  L+         S++                      
Sbjct: 387  LPKKEDRMVYSSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSQGD 446

Query: 1026 KIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMN 1085
             +R    +    L ++ NH  +LQ            A  +S  +      +  +      
Sbjct: 447  TVRTLCLSYLTVLQKVANHVALLQ------------AASTSKHQETLIKRICDQVFSRFP 494

Query: 1086 DFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIP 1145
            DF+Q   D  F             T  +  YSGKM +L  +L       DK L+FS S  
Sbjct: 495  DFVQKSKDAAF------------ETLSDPKYSGKMKVLDQLLNHFRKHRDKVLLFSFSTK 542

Query: 1146 TLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLI 1205
             LD+++ Y                G D+ RLDG T+S ER K+V+ FN   ++ V   L+
Sbjct: 543  LLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--SQDVNICLV 588

Query: 1206 STRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKI 1265
            ST AG LG+N   AN VI+ D +WNP  DLQAI RA+R GQ + V  +RL++ GT+EE +
Sbjct: 589  STMAGGLGLNFIGANVVILFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIM 648

Query: 1266 YKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            Y RQV K+ L   VV  +   R       SKE    LF
Sbjct: 649  YLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 686


>gi|168048890|ref|XP_001776898.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
 gi|162671754|gb|EDQ58301.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
          Length = 1122

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 194/673 (28%), Positives = 304/673 (45%), Gaps = 132/673 (19%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  V +   I++KL+ HQ  G+ FM+E I+  +R     +   GC+LA  MGLGKT QVI
Sbjct: 466  EVPVVVDPYIASKLRPHQKDGVMFMYECIM-GLR----SNSFCGCLLADEMGLGKTLQVI 520

Query: 771  AFLYTAMRSVNL--------------------------------------GLRTALIVTP 792
              ++T ++   L                                       ++  L+V P
Sbjct: 521  TLIWTILKQHTLFVLLDLSNEDVSSVICKRMKLYMTVGVDFHSQGPGGSPAVKRVLVVCP 580

Query: 793  VNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA-ELLAKWRA--KGGVFLIGYTAFR 849
             +++HNW  E  KW   E   LR   +   +  R A +  A ++A     + +  Y   R
Sbjct: 581  SSLVHNWGNEVHKWLGRER--LRFMAVHAGTAYREAAQKFADFKAGFSSPLLITSYEILR 638

Query: 850  NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRAD-TTQALKQVKCQRRIALT 908
                 KH+       +I  + +  P +LVCDEAH +KN   + T  AL  ++C R+I LT
Sbjct: 639  -----KHI-------DIIASTK--PGLLVCDEAHRLKNCAGNKTIDALVGLQCPRKILLT 684

Query: 909  GSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHIL 968
            G+P+QN+L E+Y M+DF   G LG    F+  F  PIE  Q   ++ E+ K+   RS  L
Sbjct: 685  GTPVQNDLNEFYAMIDFANPGLLGPLSSFKRIFAEPIERSQDRTASEEEQKLGQARSLEL 744

Query: 969  YEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS----- 1023
              + +  + R   N+ +  LP KT  V         R++  +   + G+ +  +S     
Sbjct: 745  QSRTEFCILRRTANINEAYLPTKTEVV--------ARKILFKHEGITGWHHCPMSPKEGS 796

Query: 1024 --------NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNV 1075
                     E +  +  +   +L ++ +HP   QL+ +      +  E ++ D  +   +
Sbjct: 797  MALRSVYMTENVSATILSSITSLRKLCSHP---QLSYN------DIIEGTNLDAELKSQI 847

Query: 1076 VIGEKPR--NMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-----T 1128
            +     R  +  D ++          + W             +SGK+  L  +L     +
Sbjct: 848  IAAGLSRFSDSTDNIEVLQSRASLSDEGWK------------FSGKLACLYWLLRTVYTS 895

Query: 1129 MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
              +   D+ +V S    TLDLI            Q     +G +W RLDG TE+S+RQ L
Sbjct: 896  RTARQKDRVVVVSNFTRTLDLI------------QDMCTSQGWNWLRLDGSTEASKRQLL 943

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            V++ N  +   V   L+S++AG  G+NL  ANR+++ D  WNP  D QAI R WR GQ K
Sbjct: 944  VDQLNSGVGD-VFVFLLSSKAGGTGLNLIGANRLVLFDPDWNPATDSQAIARIWREGQLK 1002

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH-------RTISKEEMLHLFEFG 1301
            PV  YRL++ G++EEKIY+RQ+ K G++A V     VH       R  SKEE+  LF   
Sbjct: 1003 PVLIYRLLSTGSIEEKIYQRQIMKGGMSAAVEGDADVHTKKSNIGRHFSKEELKELFTLN 1062

Query: 1302 DDENPDPLTAVSK 1314
               N D    +S+
Sbjct: 1063 LATNCDTFDLISR 1075


>gi|328863054|gb|EGG12154.1| hypothetical protein MELLADRAFT_76598 [Melampsora larici-populina
            98AG31]
          Length = 823

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 188/623 (30%), Positives = 294/623 (47%), Gaps = 101/623 (16%)

Query: 706  VREKGEE------AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL-GCILA 758
            + +KGE        V +   ++  L+ HQV G++F++      +      +KG+ GCI+A
Sbjct: 217  IAQKGETKPIKKVPVVLDPRLTKTLRPHQVEGVKFLYRCTTGMV------EKGVHGCIMA 270

Query: 759  HTMGLGKTFQVIAFLYTAMRSVNL----GLRTALIVTPVNVLHNWKQEFMKWRPS-ELKP 813
              MGLGKT Q I  L+T ++   +     +  A++  P +++ NW  E  KW  +  L P
Sbjct: 271  DEMGLGKTLQCITLLWTLLKQSPIPGKPAINKAIVACPSSLVKNWANELDKWLGAGALVP 330

Query: 814  LRVFMLE---DVSRDRRAELLAKWR-AKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA 869
            L V   +   D+ +  R  +LA  R     V ++ Y   R                +   
Sbjct: 331  LAVDGKQSKADLLKSVRQWVLADGRRVSQPVMIVSYETLRG--------------SLVEE 376

Query: 870  LQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
            L   P  +L+CDE H +KN    T  AL  +KC++R+ LTG+P+QN+L EY+ +++F   
Sbjct: 377  LGTAPIGLLLCDEGHRLKNAENQTYAALNSIKCEKRVILTGTPIQNDLSEYFALLNFANP 436

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL 988
             +LG   +FR  ++ PI  G+ ++S+  +V +   +   L  +++ F+ R   +++ K L
Sbjct: 437  NYLGDRAQFRKNYELPILRGRDSDSSQSEVTLAETKLKELTTKVQKFIIRRTNDLLSKYL 496

Query: 989  PPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP 1045
            P K   V+    S  QR LY+ F+   DL       V  + ++         L ++ NHP
Sbjct: 497  PVKYEHVVFCAPSTFQRDLYRHFINSPDLKKLLRG-VGCQPLKM-----LGILRKLCNHP 550

Query: 1046 GILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDL 1105
             +L L +D   P  E                                 +G+  KD     
Sbjct: 551  DLLDLHQD--IPGSEKC-----------------------------FPEGYTSKD----- 574

Query: 1106 LHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK 1165
                     + SGKMV+L  I T  +   DK ++ S    TLD++E    K+ R  + G 
Sbjct: 575  --SRAPARPELSGKMVVLERIRTQTT---DKIVLISNFTQTLDVME----KMCRERRWGC 625

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
            L        RLDG  + ++RQKLV+RFN P  K     L+S++AG  GINL  ANR+I+ 
Sbjct: 626  L--------RLDGTMQITKRQKLVDRFNNPEGKEF-IFLLSSKAGGCGINLIGANRLILF 676

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ- 1284
            D  WNP  D QA+ R WR GQ K  F YR +  G++EEK+++RQ  K  L+A VVD Q+ 
Sbjct: 677  DPDWNPASDQQALARVWRDGQKKECFVYRFILTGSVEEKVFQRQSQKMKLSASVVDEQED 736

Query: 1285 VHRTISKEEMLHLFEFGDDENPD 1307
              R  SK+ +  LF   +    D
Sbjct: 737  DARMFSKDMLRELFTLNEGTASD 759


>gi|259485020|tpe|CBF81736.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4]
          Length = 833

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 190/616 (30%), Positives = 289/616 (46%), Gaps = 100/616 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   ++P  I  +L    + HQV   +F++      I +        GCI+A  M
Sbjct: 221  LKKKVENRPKVPVVIDPRLAKVLRPHQV---QFLYRCTTGMIDR-----NAHGCIMADGM 272

Query: 762  GLGKTFQVIAFLYTAMR----SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRV 816
            GLGKT Q I+ ++T ++    +    ++  +I  P +++ NW  E  KW   + + P  V
Sbjct: 273  GLGKTLQCISLMWTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELGKWLGKDTITPFAV 332

Query: 817  FMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHAL 870
                  S+      L +W    G      V ++ Y   R                    L
Sbjct: 333  D--GKASKTELTSQLKQWAISSGRSIVRPVLIVSYETLR---------------MYVDTL 375

Query: 871  QDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
            +D P  +L+CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ +++F    
Sbjct: 376  KDSPIGLLLCDEGHRLKNKESLTWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPD 435

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP 989
             LGS +EFR RF+ PI  G+    T ED K  ++R   L   +  F+ R   +++ K LP
Sbjct: 436  LLGSQNEFRKRFEIPILKGRDAAGTEEDRKKGDERLAELSSIVNKFIIRRTNDILSKYLP 495

Query: 990  PKTVFVITVKLSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG 1046
             K   V+   LS  Q  LYK F+D   +      + S              L ++ NHP 
Sbjct: 496  VKYEHVVFCNLSQFQLDLYKHFIDSPEIKSLLRGKGSQP------LKAIGILKKLCNHPD 549

Query: 1047 ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 1106
            +L L+ D   P  E A         DY  V            +G++ D    + W     
Sbjct: 550  LLNLSTD--LPGCEHAFPD------DYVPVEA----------RGRDRD---VRPW----- 583

Query: 1107 HEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK 1165
                     YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    G 
Sbjct: 584  ---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRAYGC 630

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
            L        RLDG     +RQKLV++FN+P  +     L+S++AG  G+NL  ANR+++ 
Sbjct: 631  L--------RLDGTMNVKKRQKLVDKFNDPDGEEF-VFLLSSKAGGCGLNLIGANRLVLF 681

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQ 1284
            D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  + 
Sbjct: 682  DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAED 741

Query: 1285 VHRTISKEEMLHLFEF 1300
            V R  S + +  LF+F
Sbjct: 742  VERHFSLDSLRELFQF 757


>gi|183234185|ref|XP_650328.2| DNA repair protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801218|gb|EAL44942.2| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 764

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 170/600 (28%), Positives = 294/600 (49%), Gaps = 81/600 (13%)

Query: 706  VREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGK 765
            + +K E A+ I   I   L+ HQ+ G++FM+  I+      + G+   GCILA  MGLGK
Sbjct: 177  IDDKKEPAILIDPYIGKFLRPHQIEGVKFMYHCIM------RGGE--CGCILADEMGLGK 228

Query: 766  TFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD 825
            T Q I  ++T  +  N+  +  +IV P +++ NW++EF KW   E   ++    +   ++
Sbjct: 229  TLQTITLIWTVYKQCNI--KKIVIVCPQSLIGNWEKEFKKWLGVERISVQTGSSDSSMKE 286

Query: 826  RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMI 885
            +  + +  +     V +I Y   R+     HV+     +           ++VCDE H I
Sbjct: 287  KVNDFIRDYIP---VLIISYEQVRS-----HVETLKKTK---------IGLIVCDEGHRI 329

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN  + T  +LK +   R I L+G+P+QN L ++Y +++F   G LG+   F+  F  PI
Sbjct: 330  KNLMSKTNSSLKALGGSRHIILSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPI 389

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
            +  Q  N++ E++++  +R+  L  +L  +V R    V +K LP KT  V+ +K S LQ 
Sbjct: 390  QKAQDGNASIEEIQLGTERAKELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQI 449

Query: 1006 RLYKRFL-DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAED 1064
            +LYK  L +L     D+ S  K         Q   ++ NHP ++       Y + E    
Sbjct: 450  KLYKIMLKELEKKKLDQCSALKY-------IQLFTKLCNHPSLIS-----KYLTEEKISL 497

Query: 1065 SSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLL 1124
            + +DE     + + E+  N                                ++  +  + 
Sbjct: 498  NENDEKCIKGISLNEESSN-------------------------------KFNITIQFIK 526

Query: 1125 DILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            +IL       +K ++ S    TLDL E Y  K     KQ K++    ++ RLDG+T   +
Sbjct: 527  EILIKSK---EKVVLVSNYTKTLDLFEIYF-KQEEEYKQKKIF----NYLRLDGKTSQKQ 578

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            R  +VE+ N+  +      L+S++AG +G+NL   +R+I+ D  WNP  D QA+ R WR 
Sbjct: 579  RDIIVEKINDK-SSNYNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKDKQAMARIWRD 637

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEMLHLFEFGDD 1303
            GQ K    YR++  GT+EEKIY+RQ+ K  ++  +++   ++ +++S E+++ +FE   +
Sbjct: 638  GQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLEMGKSLSVEQLMKIFELNTN 697


>gi|320034068|gb|EFW16014.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii
            str. Silveira]
          Length = 1198

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 180/608 (29%), Positives = 282/608 (46%), Gaps = 102/608 (16%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            RIP  I   L  +Q  G++++WE   Q +          G I+   MGLGKT QVIAFL 
Sbjct: 386  RIPGDIYPYLFDYQKTGVQWLWELYQQRV----------GGIIGDEMGLGKTIQVIAFLA 435

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRDRR 827
                S  L     ++V P  V+  W  EF +W P    PLRV +L        ++ ++ R
Sbjct: 436  GLHYSKKLDA-PIIVVCPPTVMKQWVNEFHRWWP----PLRVSILHTSGSGMINIKKESR 490

Query: 828  AE--LLAK-WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV------ 878
            AE  L ++ W       + G          + ++D ++       LQ    +L+      
Sbjct: 491  AEDTLTSEIWDPYRPTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIPVDWGC 550

Query: 879  --CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
               DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG+   
Sbjct: 551  AILDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVN 610

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFV 995
            FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  ++V   DLP KT  V
Sbjct: 611  FRNQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAA-DLPKKTEQV 669

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +  KL+ LQR  Y+ FL     +N+  +  + R+    G   L +I NHP +        
Sbjct: 670  LFCKLTKLQRAAYEAFLS----SNEMSAIMRGRRDVLFGVDILRKICNHPDL-------- 717

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
                   E  +  +  +YN                                    Y    
Sbjct: 718  ------PEHKTLSQKANYN------------------------------------YGNSA 735

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM ++  +L +  + G K+L+F+Q    LD++E ++  L            G ++ R
Sbjct: 736  KSGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSL-----------TGFNYRR 784

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T    RQ +V+ FN   +  +   L++T+ G LG+NL  A+RVII D  WNP+ DL
Sbjct: 785  MDGNTPIKVRQGMVDEFNN--DPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDL 842

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T    ++ 
Sbjct: 843  QARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMSDLH 902

Query: 1296 HLFEFGDD 1303
             LF  GD+
Sbjct: 903  DLFTLGDN 910


>gi|443896932|dbj|GAC74275.1| DNA repair protein [Pseudozyma antarctica T-34]
          Length = 1029

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 168/594 (28%), Positives = 280/594 (47%), Gaps = 87/594 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR- 778
            ++  L+ HQ+ G++F++E ++        G+KG G ILA  MGLGKT Q IA + T ++ 
Sbjct: 321  LAKALRPHQIEGVKFLYERVMG---MHADGEKGQGAILADEMGLGKTLQTIALVLTLLKQ 377

Query: 779  -----SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK 833
                   +  +  A+IV P+ ++ NWK+EF KW  +    L V  +++    +      +
Sbjct: 378  SCYYTPASCTIERAIIVCPLTLVKNWKREFKKWIGTNA--LNVLCIDEGRGRQDVARFVR 435

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHAL-QDGP-DILVCDEAHMIKNTRAD 891
             R+   V +IGY   R                 C  L +D P  ++VCDE H +K+  A 
Sbjct: 436  SRSYH-VLVIGYEKLRT----------------CKDLFKDAPVGLIVCDEGHRLKSKEAK 478

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
            TTQ   ++  +R+I L+G+P+QN+L E++ M+DFV  G L S   F+  F+ PI   +  
Sbjct: 479  TTQMFDELSAERKIILSGTPIQNDLSEFFAMIDFVAPGMLNSYASFKKIFEEPIMRSRAQ 538

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
            + +         R+  L       + R   +++   LPPK   V+    SP Q R+Y+  
Sbjct: 539  HCSKHTKATGQARASALMTITNDIILRRTADILSNFLPPKKEMVLFCSPSPEQIRIYQSI 598

Query: 1012 L---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSD 1068
            L   D+         N  ++         L ++ N P +L               DS +D
Sbjct: 599  LASNDVRSLLRGDAGNGLLQ------IGVLRKLCNTPELL-------------LRDSEAD 639

Query: 1069 ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL- 1127
                   ++G+  R             +F  ++  +        +  +SGK+V ++ +L 
Sbjct: 640  GASATKALVGDMAR-------------YFPPNFVRN--------DARFSGKLVCVMQLLE 678

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
             + +   DK ++ S    TLD++E              + KK   + RLDG+T   ER  
Sbjct: 679  KLRAETDDKVVLVSNFTSTLDIVE------------AMMRKKRYSYLRLDGKTPQDERMD 726

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            +V +FN          L+S ++G +G+NL  ANR++++D  WNP+ DLQA+ R  R GQ 
Sbjct: 727  MVNQFNRDGVDSSFVFLLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQK 786

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR-TISKEEMLHLFEF 1300
            K  + YRL+  GTM+EKIY+RQ++K GL   ++   +    T S+EE+  +F  
Sbjct: 787  KVCYIYRLLLSGTMDEKIYQRQISKLGLTDSLIKGDKSSSDTFSQEELRDIFTL 840


>gi|400599789|gb|EJP67480.1| transcription-coupled repair protein CSB/RAD26 [Beauveria bassiana
            ARSEF 2860]
          Length = 1154

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 200/665 (30%), Positives = 299/665 (44%), Gaps = 154/665 (23%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +E +++P  I   L  +Q  G++++ E   Q +          G I+   MGLGKT Q+I
Sbjct: 384  DETLKLPGDIHPSLFGYQKTGVQWLAELYKQRV----------GGIVGDEMGLGKTVQLI 433

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
            AFL  A+ S     R  ++V P  +L  W  EF +W P    PLRV +L           
Sbjct: 434  AFL-AALHSSKKLKRPVIVVAPATLLRQWVSEFHRWWP----PLRVSILH---------- 478

Query: 831  LAKWRAKGGVFLIGYTA--------FRNLSFGKHVKDRNMAREICHALQDGPDILVC--- 879
                    G  ++  TA        FR ++ GK VK    AR I  A+ D   +LV    
Sbjct: 479  ------SSGSGMLNPTAEDDYDLDHFRPVA-GKSVK---AARRIIRAVVDKGHVLVTTYT 528

Query: 880  -------------------DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
                               DE H I+N  A+ T   K++    R+ L+G+P+QNNL E +
Sbjct: 529  GLQTYAEELLRVEWEYAVLDEGHKIRNPNAEITVTCKELNTPNRVILSGTPVQNNLTELW 588

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRM 979
             + DF+    LG+   FR +F+ PI  G + N+++  V    + +  L E +  ++ QR+
Sbjct: 589  SLFDFIYPMRLGTLVNFRTQFEIPIRQGGYANASNLQVMTAEKCAEALKETISEYLLQRL 648

Query: 980  DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSN--EKIRKSFFAGYQA 1037
             ++V   DLP KT  V+  KL+  QR+ Y+ FL      +D VS    + R+S + G   
Sbjct: 649  KVDVAA-DLPEKTEQVLFCKLTDGQRKAYETFL-----GSDEVSAILNRRRQSLY-GIDI 701

Query: 1038 LAQIWNHPGIL--QLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDG 1095
            L +I NHP +L  +L++  GY               DY       PR             
Sbjct: 702  LRKICNHPDLLDKKLSEKAGY---------------DYG-----SPR------------- 728

Query: 1096 FFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFY 1153
                                 S K+ L  D+L   M  N G K L+FSQ    L++IE  
Sbjct: 729  --------------------LSTKLQLTKDLLQNVMIPN-GHKMLLFSQGKLMLNIIEKC 767

Query: 1154 LSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLG 1213
            +               G  + R+DG T   +RQ +++RFN   +  V   L++TR G LG
Sbjct: 768  MRDC------------GISYLRMDGETPVDQRQPMIDRFNN--DPDVHVFLMTTRTGGLG 813

Query: 1214 INLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKE 1273
             NL  A+R+II D  WNP+ DLQA  RAWR GQ KPV  YRLM  GT+EEKIY RQ+ K+
Sbjct: 814  TNLTGADRIIIFDPDWNPSTDLQARERAWRLGQNKPVKIYRLMTEGTIEEKIYHRQIFKQ 873

Query: 1274 GLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTA-------VSKENGQGSSQNTNC 1326
             +  +V+   +   +    ++  LF +    N     +       V   NG+GS+++ N 
Sbjct: 874  FMTNKVLKDPKQRSSYDLSDLYDLFTYNSGGNAAAQRSEVFRGAEVDITNGEGSTKDDNT 933

Query: 1327 ALKHK 1331
            A  ++
Sbjct: 934  AFDYE 938


>gi|303315667|ref|XP_003067838.1| SNF2 family N-terminal domain containing protein [Coccidioides
            posadasii C735 delta SOWgp]
 gi|240107514|gb|EER25693.1| SNF2 family N-terminal domain containing protein [Coccidioides
            posadasii C735 delta SOWgp]
          Length = 1213

 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 180/608 (29%), Positives = 282/608 (46%), Gaps = 102/608 (16%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            RIP  I   L  +Q  G++++WE   Q +          G I+   MGLGKT QVIAFL 
Sbjct: 401  RIPGDIYPYLFDYQKTGVQWLWELYQQRV----------GGIIGDEMGLGKTIQVIAFLA 450

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRDRR 827
                S  L     ++V P  V+  W  EF +W P    PLRV +L        ++ ++ R
Sbjct: 451  GLHYSKKLDA-PIIVVCPPTVMKQWVNEFHRWWP----PLRVSILHTSGSGMINIKKESR 505

Query: 828  AE--LLAK-WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV------ 878
            AE  L ++ W       + G          + ++D ++       LQ    +L+      
Sbjct: 506  AEDTLTSEIWDPYRPTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIPVDWGC 565

Query: 879  --CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
               DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG+   
Sbjct: 566  AILDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVN 625

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFV 995
            FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  ++V   DLP KT  V
Sbjct: 626  FRNQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAA-DLPKKTEQV 684

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +  KL+ LQR  Y+ FL     +N+  +  + R+    G   L +I NHP +        
Sbjct: 685  LFCKLTKLQRAAYEAFLS----SNEMSAIMRGRRDVLFGVDILRKICNHPDL-------- 732

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
                   E  +  +  +YN                                    Y    
Sbjct: 733  ------PEHKTLSQKANYN------------------------------------YGNSA 750

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM ++  +L +  + G K+L+F+Q    LD++E ++  L            G ++ R
Sbjct: 751  KSGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSL-----------TGFNYRR 799

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T    RQ +V+ FN   +  +   L++T+ G LG+NL  A+RVII D  WNP+ DL
Sbjct: 800  MDGNTPIKVRQGMVDEFNN--DPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDL 857

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T    ++ 
Sbjct: 858  QARERAWRLGQKRDVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMSDLH 917

Query: 1296 HLFEFGDD 1303
             LF  GD+
Sbjct: 918  DLFTLGDN 925


>gi|323450080|gb|EGB05963.1| hypothetical protein AURANDRAFT_1051, partial [Aureococcus
            anophagefferens]
          Length = 531

 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 175/602 (29%), Positives = 276/602 (45%), Gaps = 88/602 (14%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +P  ++  L+ HQ  G++F+++  +  +R+      G G ILA  MGLGKT Q +A +
Sbjct: 1    VVVPPLLAQFLRPHQREGVQFLYD-CVAGLREYAHDYSGQGAILADDMGLGKTLQTVALV 59

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            Y  ++  ++G    ++  ++  P +++ NWK EF KW  +        +       +  E
Sbjct: 60   YALLQRGSVGDGSPVKRIVVACPCSLVPNWKAEFDKWVNARAATKSERVDCRAVDGKVGE 119

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
             +  + + G  F +   ++ +L    HV   + +   C       D+LVCDEA  +K  +
Sbjct: 120  AIDAFLSPGRPFHVLLISYESLKL--HVAKLSASATAC-------DLLVCDEAQRLKGRK 170

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
               + AL  ++C RRI LTG+P+QN+L E++ + DF   G LG+   FR  F  PI  G 
Sbjct: 171  TQLSAALGSLRCARRILLTGTPVQNDLDEFFALADFANPGVLGTPDAFRKTFDAPIAKGL 230

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
               +   DVK+   R  IL      F+ R +  +    LPPK V V+  + +  QRR   
Sbjct: 231  LRGAAPGDVKLAQDRQKILSLIAGRFLLRRENKLNAAHLPPKLVQVLVCRPAAPQRRAIA 290

Query: 1010 RFLDLHGFTNDRVSNEKIRKSFFAGYQA--LAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
              L            EK  +   AG QA  LA I  +  I        +PS +D  D+  
Sbjct: 291  ALL-----------GEKRLQHALAGKQADVLAYIGRYKKICD------HPSLDD--DAGC 331

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
            D    ++    E+                                    SGK+ +L  +L
Sbjct: 332  DARARFS---SERK-----------------------------------SGKLHVLYRLL 353

Query: 1128 TMCSNMG--DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSER 1185
                  G  ++ +V +    +L+L+    S            ++G  W  LDG+T   +R
Sbjct: 354  RELRGNGGQERVVVVANQTSSLELVSRLCS------------REGWPWCMLDGKTPLKQR 401

Query: 1186 QKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYG 1245
            + L + FN+P  +   C L+S+ AG  G+NL   +R+++ D SWNP  D QA  R WR G
Sbjct: 402  KLLNDEFNDPACEHHFCFLLSSTAGGCGLNLIGGSRLVLFDSSWNPATDKQAAARCWRDG 461

Query: 1246 QTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDEN 1305
              +  + YRL+  GT+EEKIY+RQ+ KEGLA  V DR QV+     +E+ +LF F D   
Sbjct: 462  NPRRCYTYRLLTAGTIEEKIYQRQLAKEGLACVVEDRAQVN-VFDADELHNLFAFDDAAT 520

Query: 1306 PD 1307
             D
Sbjct: 521  SD 522


>gi|167378232|ref|XP_001734726.1| DNA repair and recombination protein RAD54B [Entamoeba dispar SAW760]
 gi|165903652|gb|EDR29108.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
            dispar SAW760]
          Length = 884

 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 171/592 (28%), Positives = 273/592 (46%), Gaps = 87/592 (14%)

Query: 696  DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 755
            DA+  Y   V   K E AV +   +  KL+ HQ  G++FM++ ++     +K G +G GC
Sbjct: 246  DAVVLYQPTVTSRK-EVAVVVDPLLGLKLRPHQKAGVKFMYDCVMG----LKQGFRGNGC 300

Query: 756  ILAHTMGLGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELK 812
            ILA  MGLGKT Q +  ++T +R    G    +  ++V P +++ NW+ EF KW      
Sbjct: 301  ILADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWENEFKKWLGDAAP 360

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
             +          D+    +    A+  + +I Y   R      H+      +        
Sbjct: 361  RVVGVSCSGAKTDQAISDMDFGYAE--IMVISYDQLR-----IHIDKIEKIK-------- 405

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
            G  +L+CDE H +KN    ++QA+ +V  +RR+ L+G+P+QN L E+Y MV FV    LG
Sbjct: 406  GWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNPDVLG 465

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            S   F+  ++ PI   +  + T E+    NQRS  L    K F+ R    V +K LPPK 
Sbjct: 466  SLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTSKVNQKYLPPKV 525

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
              V+   L+PLQ+++Y     L    N     ++ +   F    AL ++ NHP ++Q   
Sbjct: 526  QHVVFCSLTPLQKKIYTALCTLK---NKPKGKDEKKSCQFQILTALKKVSNHPWLIQ--- 579

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKND--DGFFQKDWWNDLLHEHT 1110
                                             DF++   +  DG   K           
Sbjct: 580  ---------------------------------DFVKTFPEVLDGILPKG--------EA 598

Query: 1111 YKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
              +++ SGK   L  +L       +K ++ S    TL+ I  +  K   P          
Sbjct: 599  LWDMELSGKTAFLAKLLAFLRKHKEKIVIVSNYTETLNFIAHHCKKCGYP---------- 648

Query: 1171 KDWYRLDGRTESSERQKLVERFNEP-LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
              + +LDG   +++R ++V RFN P L++ +   L+S++AG  G+NL     +++ D  W
Sbjct: 649  --YIQLDGSVAATKRTQMVNRFNNPELDEFI--FLLSSKAGGCGLNLVGGANLVMFDPDW 704

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            NP  D QA+ R WR GQ K    YR ++ GT+EEK+Y+RQ+ K  LA +VV+
Sbjct: 705  NPANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIKKLELAGKVVE 756


>gi|67538714|ref|XP_663131.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4]
 gi|40743497|gb|EAA62687.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4]
          Length = 1776

 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 192/616 (31%), Positives = 290/616 (47%), Gaps = 100/616 (16%)

Query: 706  VREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTM 761
            +++K E   ++P  I  +L    + HQV   +F++      I +        GCI+A  M
Sbjct: 221  LKKKVENRPKVPVVIDPRLAKVLRPHQV---QFLYRCTTGMIDR-----NAHGCIMADGM 272

Query: 762  GLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRV 816
            GLGKT Q I+ ++T ++ S   G   ++  +I  P +++ NW  E  KW   + + P  V
Sbjct: 273  GLGKTLQCISLMWTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELGKWLGKDTITPFAV 332

Query: 817  FMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHAL 870
                  S+      L +W    G      V ++ Y   R                    L
Sbjct: 333  D--GKASKTELTSQLKQWAISSGRSIVRPVLIVSYETLR---------------MYVDTL 375

Query: 871  QDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
            +D P  +L+CDE H +KN  + T  AL  +  QRR+ L+G+P+QN+L EY+ +++F    
Sbjct: 376  KDSPIGLLLCDEGHRLKNKESLTWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPD 435

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP 989
             LGS +EFR RF+ PI  G+    T ED K  ++R   L   +  F+ R   +++ K LP
Sbjct: 436  LLGSQNEFRKRFEIPILKGRDAAGTEEDRKKGDERLAELSSIVNKFIIRRTNDILSKYLP 495

Query: 990  PKTVFVITVKLSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG 1046
             K   V+   LS  Q  LYK F+D   +      + S              L ++ NHP 
Sbjct: 496  VKYEHVVFCNLSQFQLDLYKHFIDSPEIKSLLRGKGSQP------LKAIGILKKLCNHPD 549

Query: 1047 ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 1106
            +L L+ D   P  E A         DY  V            +G++ D    + W     
Sbjct: 550  LLNLSTD--LPGCEHAFPD------DYVPVEA----------RGRDRD---VRPW----- 583

Query: 1107 HEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK 1165
                     YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL R    G 
Sbjct: 584  ---------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KLCRSRAYGC 630

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
            L        RLDG     +RQKLV++FN+P  +     L+S++AG  G+NL  ANR+++ 
Sbjct: 631  L--------RLDGTMNVKKRQKLVDKFNDPDGEEF-VFLLSSKAGGCGLNLIGANRLVLF 681

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQ 1284
            D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++ VVD  + 
Sbjct: 682  DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAED 741

Query: 1285 VHRTISKEEMLHLFEF 1300
            V R  S + +  LF+F
Sbjct: 742  VERHFSLDSLRELFQF 757


>gi|321257722|ref|XP_003193686.1| DNA recombination and repair protein Rad54B [Cryptococcus gattii
            WM276]
 gi|317460156|gb|ADV21899.1| DNA recombination and repair protein Rad54B, putative [Cryptococcus
            gattii WM276]
          Length = 818

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 193/634 (30%), Positives = 299/634 (47%), Gaps = 113/634 (17%)

Query: 702  IVNVVREK-GEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCI 756
            I+ +V EK  ++ V++P  I  +L    + HQ+ G++F++      I      D   GCI
Sbjct: 206  ILGIVDEKKNKQVVKVPVVIDPRLSKVLRPHQIEGVKFLYRCTTGLI-----ADGAWGCI 260

Query: 757  LAHTMGLGKTFQVIAFLYTAMRSVNLGLRT----ALIVTPVNVLHNWKQEFMKWRPS-EL 811
            +A  MGLGKT Q IA L+T ++   +  +      +I  P +++ NW  E +KW  S  +
Sbjct: 261  MADEMGLGKTLQCIALLWTLLKQSPIAGKPTCEKVVIACPTSLVGNWANELVKWLGSGAV 320

Query: 812  KPLRVFMLEDVSRDRRAELLA---KWRAKGG------VFLIGYTAFRNLSFGKHVKDRNM 862
             P+ V       +  +AEL+    +W    G      V ++ Y   R L           
Sbjct: 321  NPMVV-----DGKGGKAELIPAVRRWVQAHGRNVTLPVMIVSYETLRTL----------- 364

Query: 863  AREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
             +E   + + G  +L+ DE H +KN    T QAL  +K QRR+ LTG+P+QN+L EY+ +
Sbjct: 365  -QEELASCEIG--LLLADEGHRLKNAETLTFQALTSLKVQRRVILTGTPIQNDLSEYFAL 421

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
            ++F    +LGS  +F+  F++ I  G+  ++T ++    + +   L   +  F+ R   +
Sbjct: 422  LNFANPEYLGSKLDFKKNFESKILRGRDADATEKEKLESDAKLKELGGLVSKFIIRRTND 481

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALA 1039
            ++ K LP K   V+  + SPLQ  LY  F+   D+      + S              L 
Sbjct: 482  LLSKYLPVKYEHVVFCRPSPLQASLYNLFVTSKDVQRLLRGKDSQP------LKAIGLLR 535

Query: 1040 QIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK 1099
            ++ NHP +L L            ED    E +            + D   GK  D     
Sbjct: 536  KLVNHPDLLNL-----------PEDLPGSETL------------LPDGYNGKGRDRTVN- 571

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLL---LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK 1156
                            YSGK V+L   LD +   +N  DK ++ S +  TLDL+E    K
Sbjct: 572  --------------CQYSGKFVVLERMLDHIKHHTN--DKIVLISNATQTLDLME----K 611

Query: 1157 LPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
            L R  + G L        RLDG     +R K+V +FN+P +K     L+S++AG  GINL
Sbjct: 612  LCRSKRYGYL--------RLDGSMSVPKRSKIVAQFNQPESKEF-VFLLSSKAGGCGINL 662

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              ANR+++ D  WNP  D QA+ R WR GQ K  F YR    GT+EEKI++RQ  K+ L+
Sbjct: 663  IGANRLVLFDPDWNPASDQQALARVWRDGQKKECFVYRFQTTGTIEEKIFQRQCQKQNLS 722

Query: 1277 ARVVDR-QQVHRTISKEEMLHLFEFGDDENPDPL 1309
            A VVD  +   R  ++ ++  LF+F    NP+ L
Sbjct: 723  ACVVDEAEDTARHFTQGDLRQLFKF----NPETL 752


>gi|328779113|ref|XP_392959.4| PREDICTED: Rad54 protein isoform 1 [Apis mellifera]
          Length = 741

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 178/601 (29%), Positives = 291/601 (48%), Gaps = 94/601 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---V 780
            L+ HQ  G++FM+E +       K  +   GCI+A  MGLGKT Q I  L+T ++     
Sbjct: 151  LRPHQREGVKFMYECVTG-----KRIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 205

Query: 781  NLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAK--- 837
               +  A+IV P +++ NW  E  KW  + ++PL +        D +     K   +   
Sbjct: 206  KPLIDKAIIVAPSSLVKNWYNEIFKWLKNRIQPLAIDGGNKADIDTKLIGFMKTYGRKCV 265

Query: 838  GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALK 897
              + +I Y  FR            +   I H  QD   +++CDE H +KN+   T QAL 
Sbjct: 266  NPILIISYETFR------------LHAHILH--QDEVGLILCDEGHRLKNSENQTYQALI 311

Query: 898  QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSED 957
             +K +RR+ L+G+P+QN+L+EY+ +V FV +G LG++ EFR +F+ PI  GQ   +T  +
Sbjct: 312  NLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPILRGQDAAATDAE 371

Query: 958  VKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGF 1017
             K+  +R   L   +   + R    ++ K LP K   V+ +K+  +Q  LYK F+     
Sbjct: 372  RKLAQERLKELITIVNKCLIRRTSALLSKYLPLKYELVVCIKMGKIQTDLYKNFIQSDSI 431

Query: 1018 TNDRVSN-EKIRK------SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
                  N E  +K      S  +    L ++ NHP ++                      
Sbjct: 432  KKSMEENPENFKKGKRESLSTLSAITLLKKLCNHPDLV---------------------- 469

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLDIL- 1127
              Y  ++             +  DGF  ++    +   ++ KE+  + SGK+++L  +L 
Sbjct: 470  --YEKIL-------------EKSDGF--ENAAKLIPSNYSTKEILPELSGKLMVLDCLLA 512

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
            ++ +   DK ++ S    TLDL E    KL         +K+  ++ RLDG     +R K
Sbjct: 513  SIKTTTNDKIVLVSNYTQTLDLFE----KL--------CYKRCYNYVRLDGTMTIKKRSK 560

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            +VERFN+  N      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ 
Sbjct: 561  VVERFNDS-NSNDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 619

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGDDENP 1306
            KP F       GT+EEKI++RQ  K+ L++ VVD+++ V R  +  ++  LF+  ++   
Sbjct: 620  KPCFT------GTIEEKIFQRQAHKKALSSTVVDQEEDVARHFTLNDLRDLFKLEENTIS 673

Query: 1307 D 1307
            D
Sbjct: 674  D 674


>gi|119613041|gb|EAW92635.1| RAD26L hypothetical protein, isoform CRA_a [Homo sapiens]
          Length = 700

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 187/634 (29%), Positives = 284/634 (44%), Gaps = 120/634 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G RF++ + I           G GCIL   MGLGKT QVI+FL  
Sbjct: 115  IPYTINRYLRDYQREGTRFLYGHYIH----------GGGCILGDDMGLGKTVQVISFLAA 164

Query: 776  AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                  RS+      +   +  LIV P++VL+NWK E   W     
Sbjct: 165  VLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW----- 219

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  + L  Y   R            +  +  ++L+
Sbjct: 220  GYFRVTVLHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 265

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 266  WSA--VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 323

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS   F+ +F +P+E+GQ   +T  ++    +    L +++ G+  R    ++K  LP K
Sbjct: 324  GSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKK 383

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 384  EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQKRRNCCYKTNSHGETVKT 443

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
             + +    L ++ NH  +LQ            A  +S  +      +  +      DF+Q
Sbjct: 444  LYLSYLTVLQKVANHVALLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 491

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD+
Sbjct: 492  KSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 539

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            ++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST A
Sbjct: 540  LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTMA 585

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQ
Sbjct: 586  GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 645

Query: 1270 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            + K+ L   VV  +   R       SKE    LF
Sbjct: 646  IYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 679


>gi|452840044|gb|EME41982.1| hypothetical protein DOTSEDRAFT_81015 [Dothistroma septosporum NZE10]
          Length = 815

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 181/631 (28%), Positives = 302/631 (47%), Gaps = 101/631 (16%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    V  E+ +  V I   ++  L+ HQV G++F+++     I      +   GCI+
Sbjct: 197  ILGIKKKVDTERPKVPVVIDPKLAKVLRPHQVEGVKFLYKCTTGLIE-----EGAEGCIM 251

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            A  MGLGKT Q I  ++T ++ S + G   ++  +I  P +++ NW  E +KW   E   
Sbjct: 252  ADEMGLGKTLQCITLMWTLLKQSPDAGKSTIQKCVIACPASLVRNWANELVKWL-GEGAI 310

Query: 814  LRVFMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREIC 867
            +   +    S++   + + +W +  G      V ++ Y   R                  
Sbjct: 311  IPFAVDGKASKEELTQQMRQWASATGRAVIRPVLIVSYETLR---------------LYV 355

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              L++ P  +++CDE H +KN  ++T ++L  +  ++R+ L+G+P+QN+L EY+ ++DF 
Sbjct: 356  DELRNTPIGLMLCDEGHRLKNAESNTYESLTALNVKKRVILSGTPIQNDLSEYFALLDFA 415

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
              G+LG+  +FR +++ PI   +  + + +D +   +R   L  ++  F+ R   +++ K
Sbjct: 416  NSGYLGTRLDFRKQYELPILRSRDADGSDKDREKGEERLKELLGKVNKFIIRRTNDILSK 475

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
             LP K   V+   L+P Q  LY  F+   ++      + S              L ++ N
Sbjct: 476  YLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQSLLRGKGSQP------LKAIGLLKKLCN 529

Query: 1044 HPGILQLTKD-----KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
            HP +L L  D     K +P              DY       P++    L+G++ D    
Sbjct: 530  HPDLLNLPDDLPGCEKHFPD-------------DY------VPKD----LRGRDRD---V 563

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
            K +              YSGKM +L  +L  +  +  DK ++ S    TLD+ E    KL
Sbjct: 564  KPY--------------YSGKMQVLARMLARIRQDTNDKIVLISNYTQTLDVFE----KL 605

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
             R    G L        RLDG    ++RQKLVE+FN+P N      L+S++AG  G+NL 
Sbjct: 606  CRNNNYGSL--------RLDGTMNVNKRQKLVEKFNDP-NGEEFVFLLSSKAGGCGLNLI 656

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANR+++ D  WNP  D QA+ R WR GQ K  F YR M  GT+EEK+++RQ  K+ L++
Sbjct: 657  GANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFMTTGTIEEKVFQRQSHKQALSS 716

Query: 1278 RVVDR-QQVHRTISKEEMLHLFEFGDDENPD 1307
             VVD  + V R  S + +  LF++  +   D
Sbjct: 717  CVVDSAEDVERHFSVDSLRELFQYKPNTTSD 747


>gi|409082253|gb|EKM82611.1| hypothetical protein AGABI1DRAFT_118061 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 820

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 187/613 (30%), Positives = 290/613 (47%), Gaps = 102/613 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +S  L+ HQV G++F+++     I      D   GCI+A  MGLGKT Q IA +
Sbjct: 217  VVIDPRLSKVLRPHQVEGVQFLYKCTTGMIV-----DNQYGCIMADEMGLGKTLQCIALM 271

Query: 774  YTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSE-LKPLRVFMLEDVSRDRRA 828
            +T ++ S + G  T    +IV P +++ NW  E +KW   + + PL V      ++  +A
Sbjct: 272  WTLLKQSPHAGKPTIEKCIIVCPSSLVKNWANELIKWLGKDAVTPLAV-----DNKGGKA 326

Query: 829  ELLAK---WRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
            ELL K   W +  G      V +I Y   R+++               H       +L+C
Sbjct: 327  ELLPKLQRWVSARGRNVTQPVMIISYETLRSVT--------------AHLASCTIGLLLC 372

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN+   T QAL  +  +RR+ LTG+P+QN+L EY+ +++F    FLGS ++FR 
Sbjct: 373  DEGHRLKNSDNQTFQALTSLDVKRRVILTGTPVQNDLSEYFSLLNFANPNFLGSKNDFRK 432

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVK 999
             F++ I  G+   ++ E+     ++   L   +  F+ R   +++ K LP K   V+   
Sbjct: 433  NFEHAIIRGRDALASDENKAQSEKKLKELGSLVMKFIIRRTNDLLSKYLPVKYEHVVFCH 492

Query: 1000 LSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD-KG 1055
            LS  Q  LY+ F+   D+        S              L ++ NHP +L L  + KG
Sbjct: 493  LSDFQLSLYRLFITSPDIKALLRGTESQP------LKAINLLKKLCNHPDLLDLPSELKG 546

Query: 1056 ----YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                 P              D N  +                    + +W          
Sbjct: 547  SENLLPPDYTGTKGGGGRGGDRNPAV--------------------RSEW---------- 576

Query: 1112 KELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
                  GK ++L   L  + +   DK ++ S    TLDL E    +L R  K G      
Sbjct: 577  -----GGKFIVLERFLHRIRAESNDKIVLISNYTQTLDLFE----RLCRNKKYG------ 621

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
              ++RLDG+   ++RQKLV++FN+P N +    L+S++AG  GINL  ANR+I+ D  WN
Sbjct: 622  --FFRLDGKMTINKRQKLVDQFNDP-NGKEFIFLLSSKAGGCGINLIGANRLILFDPDWN 678

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTI 1289
            P  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K+ L++ VVD ++   R  
Sbjct: 679  PAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQALSSAVVDEKEDTERHF 738

Query: 1290 SKEEMLHLFEFGD 1302
            S + +  LF F +
Sbjct: 739  SVDALRQLFTFNE 751


>gi|299751759|ref|XP_002911684.1| RAD54B protein [Coprinopsis cinerea okayama7#130]
 gi|298409521|gb|EFI28190.1| RAD54B protein [Coprinopsis cinerea okayama7#130]
          Length = 1055

 Score =  244 bits (622), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 175/588 (29%), Positives = 291/588 (49%), Gaps = 90/588 (15%)

Query: 720  ISAKLKAHQVVG----IRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            ++ +++ HQ+ G    + FM+E ++  +RK     +G GCILA  MGLGKT Q IA ++T
Sbjct: 343  LARRMRPHQIEGTVICVSFMYECVM-GLRK----HEGNGCILADEMGLGKTLQTIALVWT 397

Query: 776  AMR-----SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
             ++           + ALIV PV+++ NWK EF KW   +   + V   E V+ D  A  
Sbjct: 398  LLKQNPYSGAGPIAKKALIVCPVSLITNWKAEFHKWLGRDRVGITVVDKEKVNID--AFF 455

Query: 831  LAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRA 890
              K +    V +IGY   R +         N        +    D+++CDE H +K+   
Sbjct: 456  YNKTQH---VLIIGYERLRTVI--------NKVSTSVPPI----DLIICDEGHRLKSANN 500

Query: 891  DTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQH 950
             TT   K ++ +RRI L+G+P+QN+L E++ M +F   G L     F+  ++ PI   + 
Sbjct: 501  KTTAMFKALRTRRRIILSGTPIQNDLSEFHAMTEFCNPGLLDEYPVFKRVYETPILKSRA 560

Query: 951  TNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV----------------- 993
              +T++++++   R+  L +    FV R D  ++KK LPPK                   
Sbjct: 561  PEATAKEIEVGEARTESLLQVANSFVLRRDATLLKKHLPPKRRCIAYIRMDQYLIPFPDE 620

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD 1053
            +V+ V  + LQ  ++   L       D +++    +S  A    L +I N P +L+ T D
Sbjct: 621  YVVFVTPTRLQISMFSAILRPERI--DDLASGSTAES-LALINILTKISNSPILLKATAD 677

Query: 1054 KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE 1113
              Y +R   ++SS  E       + E  R M +  Q                       +
Sbjct: 678  S-YKARTGDKESSCLERAG----VKEALRLMPEGAQ---------------------VSD 711

Query: 1114 LDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
            +  SGK+++L  +L  + +N  +K +V S    TL+++E +              + G  
Sbjct: 712  MTLSGKLIVLAKMLKDIRNNTEEKCVVVSHFTSTLNILEAFCQ------------QAGYS 759

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            +YRLDG+T   +RQ+ V  FN+   +     L+S++AG +GINL   +R+ ++D  WNP+
Sbjct: 760  FYRLDGQTPQQKRQEYVNAFNKSSQRGGFVFLLSSKAGGVGINLIGGSRLFLIDSDWNPS 819

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            +DLQA+ R  R GQ +PVF YRL+  GT++EKI++RQ+TK GL+A ++
Sbjct: 820  HDLQAMARCHRDGQKRPVFIYRLVTAGTIDEKIFQRQITKLGLSASLI 867


>gi|58219008|ref|NP_001010895.1| putative DNA repair and recombination protein RAD26-like [Homo
            sapiens]
 gi|74756405|sp|Q5T890.1|RAD26_HUMAN RecName: Full=Putative DNA repair and recombination protein
            RAD26-like
 gi|187954497|gb|AAI40703.1| Chromosome 9 open reading frame 102 [Homo sapiens]
          Length = 712

 Score =  244 bits (622), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 187/634 (29%), Positives = 284/634 (44%), Gaps = 120/634 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G RF++ + I           G GCIL   MGLGKT QVI+FL  
Sbjct: 126  IPYTINRYLRDYQREGTRFLYGHYIH----------GGGCILGDDMGLGKTVQVISFLAA 175

Query: 776  AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                  RS+      +   +  LIV P++VL+NWK E   W     
Sbjct: 176  VLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW----- 230

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  + L  Y   R            +  +  ++L+
Sbjct: 231  GYFRVTVLHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 276

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 277  WSA--VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 334

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS   F+ +F +P+E+GQ   +T  ++    +    L +++ G+  R    ++K  LP K
Sbjct: 335  GSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKK 394

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 395  EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQKRRNCCYKTNSHGETVKT 454

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
             + +    L ++ NH  +LQ            A  +S  +      +  +      DF+Q
Sbjct: 455  LYLSYLTVLQKVANHVALLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 502

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD+
Sbjct: 503  KSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 550

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            ++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST A
Sbjct: 551  LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTMA 596

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQ
Sbjct: 597  GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 656

Query: 1270 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            + K+ L   VV  +   R       SKE    LF
Sbjct: 657  IYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 690


>gi|403216105|emb|CCK70603.1| hypothetical protein KNAG_0E03460 [Kazachstania naganishii CBS 8797]
          Length = 902

 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 194/656 (29%), Positives = 302/656 (46%), Gaps = 120/656 (18%)

Query: 704  NVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII----------------------- 740
            N+ ++     V I   +S  L+ HQV G++F++  +                        
Sbjct: 242  NIEKKFANVPVVIDPKLSKILRPHQVEGVKFLYRCVTGLAMKDFMDAEKLNTMKEPSQLP 301

Query: 741  ----------------QSIRKVKSGDKG-LGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
                            + + +V    +G  GCI+A  MGLGKT Q IA ++T +R    G
Sbjct: 302  PQLEPEGKSPAKNSAKEPVAEVVPARRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQG 361

Query: 784  LR---TALIVTPVNVLHNWKQEFMKWR-PSELKPLRV----FMLEDVSRDRRAELLAKWR 835
             R     +IV P ++++NW  E +KW  P  L PL +      L   S      + A  +
Sbjct: 362  KRLIDKCIIVCPSSLVNNWANELVKWLGPGTLSPLAIDGKKSSLVSGSSTVSEAVHAWAQ 421

Query: 836  AKG-----GVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
            AKG      V +I Y T  RN+     +K+ N+             +++ DE H +KN  
Sbjct: 422  AKGRNVVKPVLIISYETLRRNVD---QLKNCNVG------------LMLADEGHRLKNGD 466

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
            + T  AL  + C RR+ L+G+P+QN+L EY+ +++F   G LG+  EFR  F+ PI  G+
Sbjct: 467  SLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTRAEFRKNFELPILRGR 526

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
               +T +++K    +   L   +  F+ R   +++ K LP K   VI V L P Q  LYK
Sbjct: 527  DAGATDKEIKKSEGQLEKLSNVVSKFIIRRTNDILSKYLPCKYEHVIFVNLKPFQHHLYK 586

Query: 1010 RFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDE 1069
              L+       + +N +           L ++ NHP +++  K+ G    ED  D     
Sbjct: 587  ELLESRSV--KKTTNGEGGSQPLQAIGILKKLCNHPNLIEFEKEFG----EDYPDKL--- 637

Query: 1070 NMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-T 1128
                     + P N N F   K+ D                  + ++SGK  +L   L  
Sbjct: 638  ---------QIPPNYN-FPGSKSRD-----------------VQTEFSGKFSILQRFLHK 670

Query: 1129 MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
            + +   DK ++ S    TLDLIE    ++ R    G +        RLDG    ++RQ L
Sbjct: 671  IKTESDDKIVLISNYTQTLDLIE----RMCRYQHYGSV--------RLDGTMTINKRQNL 718

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            V+RFN+P  +     L+S++AG  GINL  ANR+I++D  WNP  D QA+ R WR GQ K
Sbjct: 719  VDRFNDPEGQEF-IFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKK 777

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLFEFGDD 1303
              F YR +  G++EEKI++RQ  K  L++ VVD ++ V R  S   +  LF+F ++
Sbjct: 778  DCFIYRFITTGSIEEKIFQRQSMKMSLSSCVVDAKEDVERLFSANNLKQLFQFKEN 833


>gi|154276746|ref|XP_001539218.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150414291|gb|EDN09656.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 959

 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 174/588 (29%), Positives = 276/588 (46%), Gaps = 83/588 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            ++  L+ HQ  G++F++E ++  +R       G G ILA  MGLGKT Q IA ++T ++ 
Sbjct: 297  LAKHLREHQREGVKFLYECVM-GMRSFN----GEGAILADEMGLGKTLQTIALIWTLLKQ 351

Query: 780  VNLG-----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV-FMLEDVSRDRRAELLAK 833
              +      ++ ALIV PV ++ NW++EF KW  +E    RV   + D  R R  +    
Sbjct: 352  NPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNE----RVGVFVADTKRTRLTDF--T 405

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
                  V +IGY   R +             E+      G DI++ DE H ++  +  + 
Sbjct: 406  MGKSYSVMIIGYERLRTVQ-----------EELSKG--SGIDIVIADEGHRMRTVQNKSA 452

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            QA++ +   +RI L+G+P+QN+L E++ MVDFV  G LG+   F   F+ PI   +   +
Sbjct: 453  QAIQSLNTSKRIVLSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGA 512

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
              +D++    RS  L      F+ R   +++ K LPPKT +V+    +  Q+ +Y   L 
Sbjct: 513  LEKDIEKGEARSEELSNLTSLFILRRTADILLKYLPPKTEYVLLCNPTSSQKNIYHHVLS 572

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
               F     ++E    S       L ++ N P +L+              +S    N   
Sbjct: 573  SPIFQCALGNSE----SALQLITILKKLCNSPSLLK------------PRNSDQTPNSTL 616

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSN 1132
              +I   P  +  +L   +                        SGK+ +L  +L  +   
Sbjct: 617  GALISSLPPTVLRYLSPAS------------------------SGKIRVLDQLLHNIRHT 652

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
              +K ++ S    TLDL+  +L+ L  P            + RLDG T  S+RQ LV+ F
Sbjct: 653  TSEKVVLISNYTSTLDLLATFLTSLSLP------------FLRLDGSTPPSKRQGLVDDF 700

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N   +  V   L+S +AG  G+NL  A+R+I+ D  WNP  D+QA+ R  R GQ +    
Sbjct: 701  NRSSSSSVFAFLLSAKAGGTGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRHCRV 760

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            YRL+  G +EEKI++RQVTK GLA  V+D++      S+EE+  LF  
Sbjct: 761  YRLVLKGALEEKIWQRQVTKIGLADSVMDQKTGVSQFSREELKDLFRL 808


>gi|302824854|ref|XP_002994066.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii]
 gi|300138072|gb|EFJ04853.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii]
          Length = 1046

 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 206/714 (28%), Positives = 312/714 (43%), Gaps = 150/714 (21%)

Query: 633  KKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQ---------FSSKSKLMNSVT--L 681
            ++ RR     ++G   KRK  + + +  R K  ++            S S L+NS    L
Sbjct: 208  REFRRPPKSLDVGRRKKRKRPLPESKWRRKKPHKLPEQAADDNDGMPSLSHLINSFVAYL 267

Query: 682  DGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQ 741
            DGD +     E   D I            E  +RIP  I  +L  +Q  G++++WE  + 
Sbjct: 268  DGDDNDVNDEECDDDVIL-----------EGGLRIPLDIYDRLFDYQKTGVKWLWE--LH 314

Query: 742  SIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQ 801
            S++         G I+   MGLGKT QVIAFL     S       +++V PV +   WK+
Sbjct: 315  SLKT--------GGIIGDEMGLGKTVQVIAFLAALHHSRMYS--PSIVVCPVTLTFQWKR 364

Query: 802  EFMKWRPSELKPLRVFMLE---------------DVSRD-----RRAELLAKW------- 834
            E  KW P       V ++                D S D     RR   LA+W       
Sbjct: 365  EVEKWYPK----FDVQVVHESAAPKGKKKEAEDSDASGDDSGDARRDARLARWDGVVEKT 420

Query: 835  -RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
             R+  G+ +  Y   R L      KD  +  +  +A        V DE H I+N  A+TT
Sbjct: 421  VRSPSGLIVTTYEQLRLL------KDTLLDIDWGYA--------VLDEGHRIRNPDAETT 466

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
               KQ++   RI +TG+P+QN L E + + DFV  G LG    F+ +F  PI  G + N+
Sbjct: 467  LICKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFQAQFALPISIGGYANA 526

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
            TS  V    + +  L + +  ++ R   + V+  L  KT  V+   L+  QR  Y+ FL 
Sbjct: 527  TSLQVSTAYKCAVTLRDLIMPYILRRMKSDVEAKLTKKTEHVLFCSLTETQRACYRAFL- 585

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
                ++D     +  K+   G   L +I NHP +L              E  +S+++ DY
Sbjct: 586  ---ASSDVERIFEGSKNALYGIDILRKICNHPDLL--------------EREASEKHADY 628

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNM 1133
             +                                       D SGK++++  +L    + 
Sbjct: 629  GLP--------------------------------------DRSGKLMVVSQVLNSWKDQ 650

Query: 1134 GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFN 1193
            G + LVF Q+   LD++E ++              +G  + R+DG T   +R  L++ FN
Sbjct: 651  GHRVLVFCQTQQMLDIVEIFVES------------QGYTYRRMDGSTSVKQRPALIDEFN 698

Query: 1194 EPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAY 1253
            E  +  V   L++T+ G LG NL  ANRVII D  WNP+ D+QA  RAWR GQTK V  Y
Sbjct: 699  E--SSHVFVFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQTKDVIVY 756

Query: 1254 RLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPD 1307
            RL+  GT+EEK+Y RQ+ K+ L  +++   Q  R    ++M  LF   +D   D
Sbjct: 757  RLITRGTIEEKVYHRQIYKQFLTNKILRDPQQRRVFKSKDMRDLFVLHEDAEGD 810


>gi|338719517|ref|XP_001916162.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Equus caballus]
          Length = 700

 Score =  243 bits (621), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 184/622 (29%), Positives = 281/622 (45%), Gaps = 113/622 (18%)

Query: 704  NVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGL 763
            +V  +  E+   IP +I+  L+ +Q  G +F++ + IQ          G GCIL   MGL
Sbjct: 143  SVAFQLSEDGDSIPYTINRYLRDYQREGAQFLYGHFIQ----------GRGCILGDDMGL 192

Query: 764  GKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
            GKT Q+                  LIV P++VL+NWK E   W        RV +L    
Sbjct: 193  GKTVQMF-----------------LIVAPLSVLYNWKDELDTW-----GYFRVTILHGNK 230

Query: 824  RDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAH 883
            +D   EL+   + K  + L  Y   R            +  +  ++L+     ++ DEAH
Sbjct: 231  KDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLEWSA--VIVDEAH 274

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
             IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G LGS   F+ +F +
Sbjct: 275  RIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRINFKKQFSD 334

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            P+E+GQ   +T  ++    +    L +++ G+  R    ++K  LP K   ++   L+  
Sbjct: 335  PVEHGQRHTATKRELATGRKAMRRLAKKMSGWFLRRTKVLIKDQLPKKEDRMVYCSLTDF 394

Query: 1004 QRRLYKRFLDLHGFT----------------------NDRVSNEKIRKSFFAGYQALAQI 1041
            Q+ +Y+  L+    T                            E ++  +F+    L ++
Sbjct: 395  QKAVYQTVLETEDVTLILQSSEPCTCSSGRKRRNCCYKTNSHGETVKTLYFSYLAVLQKV 454

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NH  +LQ            A  +S  +      +  +      DF+Q   D  F     
Sbjct: 455  ANHVALLQ------------AASASKQQETLIKRICDQVFSKFPDFVQKSKDAAF----- 497

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG 1161
                    T  +  YSGKM +L  +L  C    DK L+FS S   LD+++ Y        
Sbjct: 498  -------ETLSDPKYSGKMKVLQQLLNHCRKNKDKVLLFSFSTKLLDVLQQY-------- 542

Query: 1162 KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                    G D+ RLDG T+S +R K+V+ FN    + V   L+ST AG LG+N   AN 
Sbjct: 543  ----CMASGLDYRRLDGNTKSEDRIKIVKEFNS--TQDVNICLVSTMAGGLGLNFVGANV 596

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQV K+ L   VV 
Sbjct: 597  VVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVG 656

Query: 1282 RQQVHRTI-----SKEEMLHLF 1298
             +   R       SKE    LF
Sbjct: 657  SENAKRYFEAVQGSKEHQGELF 678


>gi|171687146|ref|XP_001908514.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943534|emb|CAP69187.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1197

 Score =  243 bits (621), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 180/614 (29%), Positives = 290/614 (47%), Gaps = 108/614 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  +++P  I   L  +Q  G++++ E   Q +          G I+   MGLGKT Q+I
Sbjct: 402  ENGMKLPGDIYPSLFDYQKTGVQWLAELYAQQV----------GGIVGDEMGLGKTVQLI 451

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED--------V 822
            +F+  A+    +  +  ++V P  VL  W  EF +W P    PLRV +L          +
Sbjct: 452  SFV-AALHYSKMLNKPVIVVAPATVLRQWVNEFHRWWP----PLRVSILHSSGSGMFNVL 506

Query: 823  SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL----- 877
               ++ ++   W  K         A + +   K VK  ++       LQ   D+L     
Sbjct: 507  DEGKKEDVEDNWDKKSPA--KSSKAAKKI-VDKVVKHGHVLVTTYAGLQTYGDVLIPVEW 563

Query: 878  ---VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
               V DE H I+N     T   K+++   RI L+G+P+QNNL E + + DF+    LG+ 
Sbjct: 564  GYAVLDEGHKIRNPNTAITIYCKELRTPNRIILSGTPMQNNLTELWSLFDFIFPMRLGTL 623

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTV 993
              FR +F+ PI+ G + N+T+  +    + +  L E +  ++ QR+ ++V   DLP K+ 
Sbjct: 624  VSFRTQFEVPIKLGGYANATNLQIMTAQKCAETLKEAISPYLLQRLKVDVAA-DLPKKSE 682

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSN--EKIRKSFFAGYQALAQIWNHPGILQLT 1051
             V+  KLS  QR  Y+ FL      +D +++  ++ R+S + G   L +I NHP +L   
Sbjct: 683  QVLFCKLSKPQREAYELFL-----KSDEMASILDRSRQSLY-GIDILRKICNHPDLLN-- 734

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                                         PR        KN+ G+              +
Sbjct: 735  -----------------------------PRL-------KNEPGYL-------------W 745

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
              ++ SGKM ++  +L M   +G K+L+FSQ    LD+IE ++ +L              
Sbjct: 746  GSVEKSGKMAVVQSLLPMWKRLGHKTLLFSQGTQMLDIIEAFVQRL-----------DDV 794

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
             + R+DG+T   +RQ LV++FN   +  +   L++T+ G LG+NL  ANRVII D  WNP
Sbjct: 795  RYLRMDGKTPIKQRQTLVDQFNN--DPSLDVFLLTTKVGGLGVNLTGANRVIIFDPDWNP 852

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            + D+QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L+ +V+   +     + 
Sbjct: 853  STDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQTNFNL 912

Query: 1292 EEMLHLFEFGDDEN 1305
             ++  LF     E+
Sbjct: 913  NDLHDLFSLSSYED 926


>gi|388581680|gb|EIM21987.1| DNA supercoiling [Wallemia sebi CBS 633.66]
          Length = 806

 Score =  243 bits (620), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 180/604 (29%), Positives = 288/604 (47%), Gaps = 96/604 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +S  L+ HQV G++F++           +     GCI+A  MGLGKT Q IA L
Sbjct: 207  VVIDPILSKVLRPHQVEGVKFLYRCTTGL-----TAPDAQGCIMADEMGLGKTLQCIALL 261

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T ++   +     +   +IV P +++ NW  EF KW    L    V  +    +  + +
Sbjct: 262  WTLLKQSPIPGKPTVEKCIIVCPSSLVPNWANEFTKW----LGTGAVGCMAVDHKGTKEQ 317

Query: 830  LLA---KWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 880
            L++   +W A  G      V ++ Y   RNL+            E+    Q G  +++ D
Sbjct: 318  LISDVKQWCAASGRSVTQPVMIVSYETLRNLT------------EVIGRAQVG--LMMLD 363

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H +KN+ + T +AL ++ C+RR+ L+G+P+QN+L EY+ +++F    +LG+ +EFR  
Sbjct: 364  EGHRMKNSESMTFKALTEIHCKRRVILSGTPIQNDLSEYFSLLNFANPDYLGNKNEFRKN 423

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKL 1000
            F+N I  G+   +T ++ ++  ++   L   +  F+ R   +++ K LP K   V+   L
Sbjct: 424  FENIILRGRDALATDKEKQMSEEKLKELNMAVSKFIIRRTNDILSKFLPVKYEHVVFTAL 483

Query: 1001 SPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
            SPLQ  LYK F+   +       + S              L ++ NHP ++         
Sbjct: 484  SPLQLDLYKFFIESPETQALLKGKASQP------LKAIGILKKLCNHPNLI--------- 528

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                   S  D+     V++ E+  N+ + L  K                        +S
Sbjct: 529  -------SPKDDIPGSKVLLPEE--NIAERLDKKRP------------------ANPAWS 561

Query: 1118 GKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            GKM++L+  +  M  N  DK ++ S    TLDL+E   + L         W     + RL
Sbjct: 562  GKMMVLMRFIERMRKNSDDKIVLVSNYTQTLDLLEKLFAAL--------RW----GFMRL 609

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG     +R KLV+RFN+P   R    L+S++AG  G+NL  ANR+I+ D  WNP  D Q
Sbjct: 610  DGTMAVKKRGKLVDRFNDP-ESREFIFLLSSKAGGCGLNLIGANRLILFDPDWNPAADQQ 668

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEML 1295
            A+ R WR GQ K  F YR +  GT+EE++  RQ  K+ L+A VVD  +   R  SK+ + 
Sbjct: 669  ALARVWRDGQKKECFVYRFIGTGTLEEQVLMRQAYKQSLSACVVDEAEDADRHFSKDLLR 728

Query: 1296 HLFE 1299
             LF+
Sbjct: 729  ELFK 732


>gi|50302399|ref|XP_451134.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640265|emb|CAH02722.1| KLLA0A03069p [Kluyveromyces lactis]
          Length = 895

 Score =  243 bits (620), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 174/562 (30%), Positives = 274/562 (48%), Gaps = 79/562 (14%)

Query: 754  GCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PS 809
            GCI+A  MGLGKT Q +A ++T ++    G R+    +IV P ++++NW  E  KW  P 
Sbjct: 327  GCIMADEMGLGKTLQCLALMWTMLKQGPQGRRSIDKCIIVCPSSLVNNWANEIDKWLGPG 386

Query: 810  ELKPLRV-FMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNM 862
             L  L +      ++    A+ ++ W +  G      V +I Y   R          RN+
Sbjct: 387  SLSSLAIDGKKSSLNNGNVADSVSHWASAQGRNIVKPVLIISYDTLR----------RNV 436

Query: 863  AR-EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 921
             + + C        +++ DE H +KN  + T  AL  ++C RR+ L+G+P+QN+L EY+ 
Sbjct: 437  EQLKNCEV-----GLMLADEGHRLKNADSLTFTALDSIRCPRRVILSGTPIQNDLSEYFA 491

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 981
            +++F   G LGS ++FR  F+ PI   + + +T E+V +   R   L   +  F+ R   
Sbjct: 492  LLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDRLRQLSNIVSKFIIRRTN 551

Query: 982  NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTN--DRVSNEKIRKSFFAGYQALA 1039
            N++ K LP K   VI + L+P Q+ LY+ F++           SN+ ++         L 
Sbjct: 552  NILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGDSNQPLK-----AIGLLK 606

Query: 1040 QIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK 1099
            ++ NHP +L+L++D   P  E+          DY   +  +       +Q      F   
Sbjct: 607  KLCNHPDLLELSED--IPGSEELIPD------DYQSSVDSRTSRNRSVIQTAFSSKF--- 655

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
                 +L    YK                + +   DK ++ S    TLDLIE    K+  
Sbjct: 656  ----SVLARFLYK----------------IKTESNDKIVLISNYTQTLDLIE----KMCF 691

Query: 1160 PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
                G L        RLDG    ++RQKLV+RFN+P  +     L+S++AG  GINL  A
Sbjct: 692  SNHYGVL--------RLDGTMNINKRQKLVDRFNDPEGQEF-IFLLSSKAGGCGINLIGA 742

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NR+I++D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ  K  L++ V
Sbjct: 743  NRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCV 802

Query: 1280 VD-RQQVHRTISKEEMLHLFEF 1300
            VD ++ V R  S + +  LF+ 
Sbjct: 803  VDEKEDVERLFSSDNLKQLFKL 824


>gi|398408155|ref|XP_003855543.1| SNF2 family DNA repair and recombination protein, partial
            [Zymoseptoria tritici IPO323]
 gi|339475427|gb|EGP90519.1| SNF2 family DNA repair and recombination protein [Zymoseptoria
            tritici IPO323]
          Length = 1207

 Score =  243 bits (620), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 177/608 (29%), Positives = 285/608 (46%), Gaps = 102/608 (16%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
              RIP  I   L  +Q  G++++WE   Q +          G I+   MGLGKT Q+I+F
Sbjct: 388  GFRIPGDIYPSLFDYQKTGVQWLWELFSQQV----------GGIIGDEMGLGKTIQIISF 437

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRD 825
            L   +   N   +  ++V P  V+  W  EF +W P    PLRV +L        D+ R+
Sbjct: 438  L-AGLHYSNKLTKPIIVVCPATVMKQWVNEFHRWWP----PLRVSILHTSGSGMLDLRRE 492

Query: 826  R--RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL------ 877
                 EL      +      GY + + +   + V+D ++       LQ   ++L      
Sbjct: 493  TSFEDELEEDSFQRKRTHSKGYNSAKRI-LNRVVRDGHVLVTTYSGLQTYAELLIPTDWE 551

Query: 878  --VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSH 935
              V DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG+  
Sbjct: 552  YAVLDEGHKIRNPNTSITIFCKELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLV 611

Query: 936  EFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVF 994
             F+++F+ PI+ G + N+++  V+   + +  L + +  ++ QR  ++V   DLP K+  
Sbjct: 612  NFKSQFEVPIKQGGYANASNLQVETAMKCAETLKDTISPYLLQRFKVDVAA-DLPKKSER 670

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
            V+  KL+ LQR  Y+ FL     ++D  S    ++    G   L +I NHP ++      
Sbjct: 671  VLFCKLTKLQRDAYEWFLR----SDDMSSIMNGKRQALYGIDILRKICNHPDLV------ 720

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                    E  +  +   Y    G K                                  
Sbjct: 721  --------EHKTLSKKTSYAYGTGSK---------------------------------- 738

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGKM ++  +L +    G K+L+F+Q    LD++E ++  +           KG ++ 
Sbjct: 739  --SGKMQVVKALLEIWKRNGHKTLLFAQHRIMLDILESFIQGM-----------KGFNYR 785

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            R+DG T   +RQ LV+ FN+  N  +   L++T+ G LG+NL  A+RVII D  WNP+ D
Sbjct: 786  RMDGNTSIKDRQDLVDEFNKDQN--LHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTD 843

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            +QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T   +++
Sbjct: 844  VQARERAWRLGQKREVEIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFHLKDL 903

Query: 1295 LHLFEFGD 1302
              LF  GD
Sbjct: 904  HDLFTLGD 911


>gi|350589423|ref|XP_003357745.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and recombination
            protein RAD26-like [Sus scrofa]
          Length = 713

 Score =  243 bits (620), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 183/629 (29%), Positives = 283/629 (44%), Gaps = 115/629 (18%)

Query: 705  VVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLG 764
            V  +  E+   IP +I+  L+ +Q  G +F++ + IQ          G GCIL   MGLG
Sbjct: 116  VAFQLSEDGASIPYTINRYLRDYQREGAQFLYGHFIQ----------GRGCILGDDMGLG 165

Query: 765  KTFQVIAFLYTAM------------------RSV------NLGLRTALIVTPVNVLHNWK 800
            KT QVI+FL   +                  RS+      +   +  LIV P++VL+NW+
Sbjct: 166  KTVQVISFLAAVLGKKGTREDIENNMPEFLLRSMKKEAPSSAAKKLFLIVAPLSVLYNWR 225

Query: 801  QEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR 860
             E   W        RV +L    +D   EL+   + K  + L  Y   R           
Sbjct: 226  DELDTW-----GYFRVTILHGNKKDN--ELIRVKQRKCEIALTTYETLR----------- 267

Query: 861  NMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
             +  +  ++L+     ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +
Sbjct: 268  -LCLDELNSLEWSA--VIVDEAHRIKNPKARITEVMKALKCNVRIGLTGTILQNNMKELW 324

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
            C++D+   G LGS   F+  F +P+E+GQ   +T  ++    +    L  ++ G+  R  
Sbjct: 325  CVMDWAVPGLLGSEIHFKKHFSDPVEHGQRHTATKRELATGRKAMQRLAIKMSGWFLRRT 384

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT---------------------- 1018
              ++K  LP K   ++   L+  Q+ +Y+  L+    +                      
Sbjct: 385  KILIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVSLILQSSEPCPCSSGQKRRNCCY 444

Query: 1019 NDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIG 1078
                  E ++  +F+    L ++ NH  +LQ            A  +S  +      +  
Sbjct: 445  KTNSHGESVKTLYFSYLAVLQKVANHVALLQ------------AASTSKQQETLIKRICD 492

Query: 1079 EKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSL 1138
            +      DF+Q   D  F             T  +  YSGKM +L  +L  C    DK L
Sbjct: 493  QVFSRFPDFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNKDKVL 540

Query: 1139 VFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNK 1198
            +FS S   LD+++ Y                G D+ RLDG T+S ER K+V+ FN    +
Sbjct: 541  LFSFSTKLLDVLQQY------------CMASGLDYRRLDGSTKSEERIKIVKEFNS--TQ 586

Query: 1199 RVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAH 1258
             V   L+ST AG LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ 
Sbjct: 587  DVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISL 646

Query: 1259 GTMEEKIYKRQVTKEGLAARVVDRQQVHR 1287
            GT+EE +Y RQ+ K+ L   VV  +   R
Sbjct: 647  GTVEEIMYLRQLYKQQLHCVVVGSENAKR 675


>gi|58266612|ref|XP_570462.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21]
 gi|134110952|ref|XP_775940.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50258606|gb|EAL21293.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|57226695|gb|AAW43155.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans
            JEC21]
          Length = 818

 Score =  243 bits (620), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 192/634 (30%), Positives = 298/634 (47%), Gaps = 113/634 (17%)

Query: 702  IVNVVREK-GEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCI 756
            I+ +V EK  ++ V++P  I  +L    + HQ+ G++F++      I      D   GCI
Sbjct: 206  ILGIVDEKKNKQVVKVPVVIDPRLSKVLRPHQIEGVKFLYRCTTGLI-----ADGAWGCI 260

Query: 757  LAHTMGLGKTFQVIAFLYTAMRSVNLGLRT----ALIVTPVNVLHNWKQEFMKWRPS-EL 811
            +A  MGLGKT Q IA L+T ++   +  +      +I  P +++ NW  E +KW  +  +
Sbjct: 261  MADEMGLGKTLQCIALLWTLLKQSPVAGKPTCEKVIIACPTSLVGNWANELVKWLGTGAV 320

Query: 812  KPLRVFMLEDVSRDRRAELLA---KWRAKGG------VFLIGYTAFRNLSFGKHVKDRNM 862
             P+ V       +  +AEL+    +W    G      V ++ Y   R L           
Sbjct: 321  SPMVV-----DGKGGKAELIPAVRRWVQAHGRNVTLPVMIVSYETLRTL----------- 364

Query: 863  AREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
             +E   + + G  +L+ DE H +KN    T QAL  +K QRR+ LTG+P+QN+L EY+ +
Sbjct: 365  -QEELASCEIG--LLLADEGHRLKNAETLTFQALTSLKVQRRVILTGTPIQNDLSEYFAL 421

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
            ++F    +LGS  +F+  F++ I  G+  ++T ++    + +   L   +  F+ R   +
Sbjct: 422  LNFANPEYLGSKLDFKKNFESKILRGRDADATEKEKLESDAKLKELGGLVSKFIIRRTND 481

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALA 1039
            ++ K LP K   V+  + SPLQ  LY  F+   D+      + S              L 
Sbjct: 482  LLSKYLPVKYEHVVFCRPSPLQASLYNLFVTSKDVQRLLRGKDSQP------LKAIGLLR 535

Query: 1040 QIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK 1099
            ++ NHP +L L            ED    E +            + D   GK  D     
Sbjct: 536  KLVNHPDLLNL-----------PEDLPGSEAL------------LPDGYNGKGRDRTVN- 571

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLL---LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK 1156
                            YSGK V+L   LD +   +N  DK ++ S +  TLDL+E    K
Sbjct: 572  --------------CQYSGKFVVLERMLDHINHHTN--DKIVLISNATQTLDLME----K 611

Query: 1157 LPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINL 1216
            L R  + G L        RLDG     +R K+V +FN+P +K     L+S++AG  GINL
Sbjct: 612  LCRSKRYGYL--------RLDGSMSVPKRSKIVAQFNQPESKEF-VFLLSSKAGGCGINL 662

Query: 1217 HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
              ANR+++ D  WNP  D QA+ R WR GQ K  F YR    GT+EEKI++RQ  K+ L+
Sbjct: 663  IGANRLVLFDPDWNPASDQQALARVWRDGQKKECFVYRFQTTGTIEEKIFQRQCQKQNLS 722

Query: 1277 ARVVDRQQ-VHRTISKEEMLHLFEFGDDENPDPL 1309
            A VVD  +   R  ++ ++  LF F    NP+ L
Sbjct: 723  ACVVDEAEDTARHFTQGDLRQLFNF----NPETL 752


>gi|401841469|gb|EJT43853.1| RAD54-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 898

 Score =  243 bits (620), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 198/665 (29%), Positives = 310/665 (46%), Gaps = 129/665 (19%)

Query: 692  EVLGDAITGYIVNVVREKGEEA---VRIPSSISAKLKAHQVVGIRFMWENIIQSIRK--- 745
            E+LGD+     VN+   K + A   V I   ++  L+ HQV G+RF++  +   + K   
Sbjct: 241  ELLGDS-----VNLAESKKKFANVPVVIDPRLAKILRPHQVEGVRFLYRCVTGLVMKDYL 295

Query: 746  ------------VKSGDKGL--------------GCILAHTMGLGKTFQVIAFLYTAMRS 779
                        +KS +K L              GCI+A  MGLGKT Q IA ++T +R 
Sbjct: 296  EAEAFNSSNEEPLKSDEKALSQSQKTEGDNRGAYGCIMADEMGLGKTLQCIALMWTLLRQ 355

Query: 780  VNLGLR---TALIVTPVNVLHNWKQEFMKWR-PSELKPLRVFMLEDV---SRDRRAELLA 832
               G R     +IV P ++++NW  E +KW  P+ L PL V   +          ++ + 
Sbjct: 356  GPQGKRLIDKCIIVCPSSLVNNWANELVKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAVH 415

Query: 833  KWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAR-EICHALQDGPDILVCDEAHMI 885
             W    G      V +I Y   R          RN+ + + C        +++ DE H +
Sbjct: 416  AWAQAQGRNIVKPVLIISYETLR----------RNVDQLKTCDI-----GLMLADEGHRL 460

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN  + T  AL  + C RR+ L+G+P+QN+L EY+ ++ F   G LG+  +FR  F+ PI
Sbjct: 461  KNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGTRAQFRKNFEKPI 520

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
              G+  ++T +++    ++   L   +  F+ R   +++ K LP K   VI V L PLQ 
Sbjct: 521  LRGRDADATDKEISKSEEQLQKLSTIVSKFIIRRTNDILSKYLPCKYEHVIFVNLKPLQN 580

Query: 1006 RLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA 1062
             LY + +   ++         ++ +R         L ++  HP +L           ED 
Sbjct: 581  DLYNKLIKSREVKKVVKGVGGSQPLR-----AIGILKKLCTHPNLLNF---------EDE 626

Query: 1063 EDSSSDENM--DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKM 1120
             D  +D ++  DY++     P + +  +Q K                        YS K 
Sbjct: 627  FDDENDLDLPDDYSM-----PASKSRDVQTK------------------------YSAKF 657

Query: 1121 VLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
             +L   L  + +   DK ++ S    TLDLIE    K+ R         K     RLDG 
Sbjct: 658  SILERFLHKIRTESDDKIVLISNYTQTLDLIE----KMCR--------YKHYSAARLDGT 705

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
               ++RQKLV+RFN+P  +     L+S++AG  GINL  ANR+I++D  WNP  D QA+ 
Sbjct: 706  MSINKRQKLVDRFNDPEGQEF-IFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALA 764

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLHLF 1298
            R WR GQ K  F YR ++ GT+EEKI++RQ  K  L++ VVD ++ V R  S + +  LF
Sbjct: 765  RVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLF 824

Query: 1299 EFGDD 1303
            +  +D
Sbjct: 825  QKNED 829


>gi|350408475|ref|XP_003488415.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Bombus
            impatiens]
          Length = 820

 Score =  243 bits (620), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 189/652 (28%), Positives = 302/652 (46%), Gaps = 96/652 (14%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            VN    + E  V + + +   L+ HQ  GI F++E I+    KV +     G ILA  MG
Sbjct: 210  VNHDMSENETEVFVDTCLVNVLRPHQRHGIVFLYECIMG--LKVSNH---FGAILADEMG 264

Query: 763  LGKTFQVIAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML 819
            LGKT Q I  ++T ++    G   L+  LIVTP  + +NW +EF +W         V   
Sbjct: 265  LGKTLQCITIIWTLLKKGPYGYPILKYILIVTPSCLCNNWNKEFKQWLGFHRISPYVVNA 324

Query: 820  EDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILV 878
            ++ ++D +  +      +  V +I Y               ++       +++ P ++++
Sbjct: 325  KNKAKDFKKHI------RNSVMIISY---------------DLLTRCEQEVKEIPFNLII 363

Query: 879  CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFR 938
            CDE H +KN      + L  +KC+R+I LTG+P+QNNL E++ ++DFV    LGS+ EF+
Sbjct: 364  CDEGHRLKNNDIKAAKILYNLKCKRKILLTGTPIQNNLQEFFTLIDFVNPTILGSNSEFK 423

Query: 939  NRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITV 998
            N ++ PI   Q   +    V +  +R++ L E+ K F+ R     + K LP K   ++  
Sbjct: 424  NYYEKPIVASQCPTAPDHVVSLGTERANELREKTKCFILRRTQETINKYLPSKHELIVFC 483

Query: 999  KLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPS 1058
            +LS  Q+ LY +  D   + N  +S+  I         AL +I NHP +    K + +  
Sbjct: 484  RLSIEQQDLYSQVTD--SWFNKSLSDNNI--PHLTVITALKKICNHPELFYNEKTELF-- 537

Query: 1059 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
                              I  K  N+ D  +                          Y G
Sbjct: 538  -----------------CIDSKTSNIKDSTKTV------------------------YCG 556

Query: 1119 KMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
            K+ ++  +L       +K ++ S    TLD++E   +            K+G  + RLDG
Sbjct: 557  KISIVQTLLRNLKKTEEKLVLVSYYTQTLDILETVCN------------KEGLQFLRLDG 604

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
             T S+ R K++ERFN   +K  K  L+S +AG +G+NL  A+R+I+ D  WNP  D QA+
Sbjct: 605  STTSNTRSKIIERFNSTSDKS-KVFLLSAKAGGVGLNLPGASRLILFDSDWNPASDSQAM 663

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR-TISKEEMLHL 1297
             R WR GQ K V+  RL+  GT+EEKI++RQ++K  L   VVD        +S  E+  L
Sbjct: 664  ARIWRDGQKKDVYILRLLTTGTIEEKIFQRQISKASLNETVVDLNPSSSFKLSINELKDL 723

Query: 1298 FEFGDDEN---PDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMES 1346
            F    + N    D +      NG   S+ T+  L  K   S++   DK ++S
Sbjct: 724  FTLTANTNCLTHDLMNCSC--NGYKKSEETSEKLHQKDATSYQFLGDKTLKS 773


>gi|255720394|ref|XP_002556477.1| KLTH0H14300p [Lachancea thermotolerans]
 gi|238942443|emb|CAR30615.1| KLTH0H14300p [Lachancea thermotolerans CBS 6340]
          Length = 1037

 Score =  243 bits (620), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 189/636 (29%), Positives = 288/636 (45%), Gaps = 124/636 (19%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
             RIP  I   L  +Q   +++++E   Q            G I+   MGLGKT Q+IAFL
Sbjct: 259  FRIPGEIFQSLFNYQKTCVQWLYELYQQQC----------GGIIGDEMGLGKTIQIIAFL 308

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML----------EDVS 823
             +   S  L     L+V P  VL  W +EF  W P    P R  +L          E++S
Sbjct: 309  ASLHHSGKLN-GPILVVCPATVLRQWCKEFHTWWP----PFRAIILHSIGAGMTQKENLS 363

Query: 824  RDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE--ICHALQDGPDIL---- 877
              +  EL      +       + A+ N    K + + ++ R+  I   + DG  ++    
Sbjct: 364  EQKLEELFMNSNPEE----FSFDAYTNSKRTKSILESSLTRDNLINKVVTDGHVLITTYV 419

Query: 878  -----------------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYY 920
                             V DE H I+N  AD +   KQ+K + RI L+G+P+QNNL E +
Sbjct: 420  GLRIHSDKLLNVRWGYAVLDEGHKIRNPDADISLTCKQLKTKNRIILSGTPIQNNLTELW 479

Query: 921  CMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMD 980
             + DF+  G LG+   F+ +F  PI  G + N+T+  V+   + +  L   +  ++ R  
Sbjct: 480  SLFDFIFPGRLGTLPVFQQQFSVPINMGGYANATNIQVQTGYKCAVALRNLISPYLLRRI 539

Query: 981  MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQ 1040
               V KDLP K   V+  KL+  QR  Y +FL+    + D V  +  ++    G   L +
Sbjct: 540  KADVAKDLPRKNEMVLFCKLTQYQRNKYLQFLN----SEDLVKIKNGKRQVLFGIDILRK 595

Query: 1041 IWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD 1100
            I NHP +L+         RE                            Q +N+D      
Sbjct: 596  ICNHPDLLE---------RE----------------------------QRQNED------ 612

Query: 1101 WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                     +Y +   SGKM ++  +L +  + G K+L+F+QS   LD++E ++S     
Sbjct: 613  ---------SYGDPKRSGKMQVVKQLLKLWHSQGHKTLLFTQSRQMLDILERFISY---- 659

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
             K  +L  +   + R+DG T    RQ LV+ FN   N      L++TR G LG+NL  AN
Sbjct: 660  -KDPEL--EELTYLRMDGTTSIGARQALVDSFN---NGSYDVFLLTTRVGGLGVNLTGAN 713

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+II D  WNP+ D+QA  RAWR GQ + V  YRLM  G++EEKIY RQ+ K+ L  +++
Sbjct: 714  RIIIFDPDWNPSTDMQARERAWRIGQRREVTIYRLMIAGSIEEKIYHRQIFKQFLTNKIL 773

Query: 1281 DRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKEN 1316
               +  R     E+  LF  G +      T ++ EN
Sbjct: 774  TDPKQKRFFKMNELQDLFTLGGE------TGLTNEN 803


>gi|50309923|ref|XP_454975.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644110|emb|CAH00062.1| KLLA0E22617p [Kluyveromyces lactis]
          Length = 1033

 Score =  243 bits (619), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 176/583 (30%), Positives = 267/583 (45%), Gaps = 98/583 (16%)

Query: 751  KGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE 810
            +G G I+   MGLGKT Q+IAFL T   S  L     L+V P  V+  W  EF  W P  
Sbjct: 282  QGCGGIIGDEMGLGKTIQIIAFLATLHHSRKLN-GPVLVVCPATVMKQWCNEFHTWWP-- 338

Query: 811  LKPLRVFMLEDVSRD-RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDR-------NM 862
              P R  +L  +     +   + +   +  +    Y  F    + K  K R       ++
Sbjct: 339  --PFRAVILHSIGAGMNKGTQIPEEELEKMLMTSNYGTFTYNDYEKKEKTRTSLESRKSV 396

Query: 863  AREICHALQDGPDIL---------------------VCDEAHMIKNTRADTTQALKQVKC 901
             + +   + DG  I+                     + DE H I+N  +D +   KQ+K 
Sbjct: 397  KKLLEKVITDGHIIITTYVGLRLHSEALLNVRWGYAILDEGHKIRNPDSDISLTCKQLKT 456

Query: 902  QRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 961
            Q RI L+G+P+QNNL E + + DFV  G LG+   F+ +F NPI  G + N+++  VK  
Sbjct: 457  QNRIILSGTPIQNNLTELWSLFDFVYPGKLGTLPVFQQQFANPINMGGYANASNIQVKTG 516

Query: 962  NQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDR 1021
             + +  L + +  ++ R   + V KDLP K   V+  KL+  Q+  Y  FL     +++ 
Sbjct: 517  YKCAVALRDLISPYLLRRVKSDVAKDLPKKNEMVLFCKLTQYQKSKYLEFL----HSDEL 572

Query: 1022 VSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKP 1081
            +   K ++    G   L +I NHP +L L + K                           
Sbjct: 573  MKIRKGKRQVLYGIDILRKICNHPDLLDLKRKK--------------------------- 605

Query: 1082 RNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFS 1141
              MND+                    +  Y     SGKM ++  +L +  + G K+L+F+
Sbjct: 606  --MNDY-------------------EDADYGNPARSGKMQVVKQLLLLWHSQGHKTLLFT 644

Query: 1142 QSIPTLDLIEFYLS-KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRV 1200
            QS   LD+++ ++S K P       L        R+DG T    RQ LV++FN   N+  
Sbjct: 645  QSRQMLDILQEFISYKDPELSDLKFL--------RMDGTTNIGSRQSLVDKFN---NEPY 693

Query: 1201 KCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGT 1260
               L++TR G LGINL  ANR+II D  WNP+ D+QA  RAWR GQ + V  YRLM  G+
Sbjct: 694  DVFLLTTRVGGLGINLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVTIYRLMIAGS 753

Query: 1261 MEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            +EEKIY RQ+ K+ L+ +++   +  R     ++  LF  G D
Sbjct: 754  IEEKIYHRQIFKQFLSNKILKDPKQKRFFKMNDLHDLFTLGGD 796


>gi|402072696|gb|EJT68413.1| DNA repair and recombination protein RAD26, partial [Gaeumannomyces
            graminis var. tritici R3-111a-1]
          Length = 1071

 Score =  243 bits (619), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 186/613 (30%), Positives = 291/613 (47%), Gaps = 104/613 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +  +++P  I   L  +Q  G+R++ E   Q++          G I+   MGLGKT Q+I
Sbjct: 355  DNGLKLPGDIYPALFDYQKTGVRWLSELFEQNV----------GGIVGDEMGLGKTVQLI 404

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVS 823
            +F+     S  L  R  ++V P  +L  W  EF +W P    PLRV +L        DV 
Sbjct: 405  SFVAALHYSQKL-TRPVIVVAPATLLRQWVNEFHRWWP----PLRVSILHSSGSGMLDVR 459

Query: 824  RDRRAE--LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL---- 877
             + R E   L+    +      G  A + +   + VKD ++       LQ    IL    
Sbjct: 460  SEGRLEDDELSSSDEEAPKKKRGAKAAKKI-VDRVVKDGHVLVTTYAGLQAYGGILIPVE 518

Query: 878  ----VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
                V DE H I+N     T   K+++   R+ L+G+P+QNNL+E + + DF+    LG+
Sbjct: 519  WDYAVLDEGHKIRNPNTALTVYCKELRTANRVILSGTPIQNNLVELWSLFDFIYPMRLGT 578

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNVVKKDLPPKT 992
             HEFRN  + PI  G + N+T+  +    + +  L + +  + +QR+  +V   DLP K+
Sbjct: 579  LHEFRNNIEIPIRLGGYANATNLQIMTAQKCAETLKDAISPYLLQRVKADVA-ADLPKKS 637

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
              V+  +L+ +QR  Y++FL       D++ N   RKSFF G   L ++ NHP +L  + 
Sbjct: 638  EQVLFCRLTQIQRSAYEQFLSSKEM--DQILN-GTRKSFF-GIDQLRKVCNHPDLLDPSV 693

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 1112
             +G PS                                                  + + 
Sbjct: 694  -RGDPS--------------------------------------------------YRWG 702

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
                SGKM ++  +L M    G K+L+FSQ    LD++E ++ +           + G  
Sbjct: 703  SASKSGKMQVVKALLHMWKRFGHKTLLFSQGTQMLDILEAFVRR-----------QDGIR 751

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            + R+DGRT   +RQ LV++FN      +   L++T+ G LG+NL  A+RVII D  WNP+
Sbjct: 752  YLRMDGRTPIKDRQTLVDQFNN--TPELDIFLLTTKVGGLGVNLTGADRVIIFDPDWNPS 809

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTISK 1291
             D+QA  RAWR GQ K V  YRLM  GT+EEKIY+RQ+ K+ L  +V+ D  Q +   + 
Sbjct: 810  TDVQARERAWRLGQKKEVTIYRLMTAGTIEEKIYQRQIFKQFLTNKVLKDPSQRNGFATM 869

Query: 1292 EEMLHLFEFGDDE 1304
            +++ +LF     E
Sbjct: 870  QDLHNLFTLASYE 882


>gi|225560239|gb|EEH08521.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 974

 Score =  243 bits (619), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 175/588 (29%), Positives = 275/588 (46%), Gaps = 83/588 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            ++  L+ HQ  G++F++E ++  +R       G G ILA  MGLGKT Q IA ++T ++ 
Sbjct: 312  LAKHLREHQREGVKFLYECVM-GMRSFN----GEGAILADEMGLGKTLQTIALIWTLLKQ 366

Query: 780  VNLG-----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV-FMLEDVSRDRRAELLAK 833
              +      ++ ALIV PV ++ NWK+EF KW  +E    RV   + D  R R  +    
Sbjct: 367  NPIYEAQPVVKKALIVCPVTLIDNWKKEFRKWLGNE----RVGVFVADAKRTRLTDF--T 420

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
                  V +IGY   R +             E+      G DI++ DE H ++  +  + 
Sbjct: 421  MGKSYSVMIIGYERLRTVQ-----------EELSKG--SGIDIVIADEGHRMRTVQNKSA 467

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            QA++ +   +RI L+G+P+QN+L E++ MVDFV  G LG+   F   F+ PI   +   +
Sbjct: 468  QAIQSLNTSKRIVLSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGA 527

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
              +D++    RS  L      F+ R   +++ K LPPKT +V+    +  Q+ +Y   L 
Sbjct: 528  LEKDIEKGEARSEELTNLTSLFILRRTADILLKYLPPKTEYVLFCNPTSSQKNIYHYVLS 587

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
               F     ++E    S       L ++ N P +L+              +S    N   
Sbjct: 588  SPIFQCALGNSE----SALQLITILKKLCNSPSLLK------------PRNSDQTPNSTL 631

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSN 1132
              +I   P  +   L   +                        SGK+ +L  +L  +   
Sbjct: 632  GALISSLPPTVLRHLSPAS------------------------SGKIRVLDQLLHNIRHT 667

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
              +K ++ S    TLDL+  +L+ L  P            + RLDG T  S+RQ LV+ F
Sbjct: 668  TSEKVVLISNYTSTLDLLATFLTSLSLP------------FLRLDGSTPPSKRQGLVDDF 715

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N   +  V   L+S +AG  G+NL  A+R+I+ D  WNP  D+QA+ R  R GQ +    
Sbjct: 716  NRSSSSSVFAFLLSAKAGGTGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRHCRV 775

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            YRL+  G +EEKI++RQVTK GLA  V+D++      S+EE+  LF  
Sbjct: 776  YRLVLKGALEEKIWQRQVTKIGLADSVMDQKTGVSQFSREELRDLFRL 823


>gi|348588337|ref|XP_003479923.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Cavia
            porcellus]
          Length = 933

 Score =  243 bits (619), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 185/603 (30%), Positives = 300/603 (49%), Gaps = 79/603 (13%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +   L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ +
Sbjct: 279  VVIDPHVVYHLRPHQKEGIIFLYECVM-GMRM----NGRYGAILADEMGLGKTLQCISLI 333

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T       G    ++  LIVTP +++ NW++EF +W  SE   +++F    V +D + E
Sbjct: 334  WTLQCQGPYGGQPVIKRTLIVTPGSLVTNWRKEFKQWLGSER--IKIFT---VDQDHKVE 388

Query: 830  LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
               K      V +I Y    R+L   K++K                D+L+CDE H +KN+
Sbjct: 389  EFMK-STFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 432

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
               TT AL  + C++RI LTG+P+QN+L E++ ++DFV  G LGS   +R  ++ PI   
Sbjct: 433  AIKTTTALFSLSCKKRIILTGTPIQNDLQEFFALIDFVNPGVLGSLSSYRKIYEEPIIMS 492

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
            +  +++ E+ ++  +R+  L      F+ R    V+ K LPPK   V+  +   LQ  LY
Sbjct: 493  REPSASEEEKELGERRAAELTRLTGLFILRRTQEVINKYLPPKIENVLFCRPGTLQIELY 552

Query: 1009 KRFLDLHGFTNDRVSNEKIRKS-FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            K+ L+    T        +  S       AL ++ NHP +L       + S +  E S++
Sbjct: 553  KKLLNSQ--TVKFCLQGSVENSPHLICIGALKKLCNHPCLL-------FNSIKGKECSTT 603

Query: 1068 -DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDI 1126
             D N + ++  G     +N F    N   F +K+                SGK+ +L  +
Sbjct: 604  CDGNEEKSLYEGL----LNVFPTDYNPLVFTEKE----------------SGKLQVLSQL 643

Query: 1127 LTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1184
            L +   +   +K ++ S    TLD++            Q    + G  + RLDG+T  S+
Sbjct: 644  LAVIHELRPTEKVVLVSNYTQTLDIL------------QDICKRYGYSYTRLDGQTPISQ 691

Query: 1185 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 1244
            RQ++V+ FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+ R WR 
Sbjct: 692  RQQIVDGFNSKYSSDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRD 750

Query: 1245 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEFGD 1302
            GQ   V  YRL+  GT+EEKIY+RQ++K+ L+  VVD  +   H   S EE+ +LF   +
Sbjct: 751  GQKHAVHIYRLLTTGTIEEKIYQRQISKQALSGAVVDLTKTSEHIQFSVEELKNLFTLHE 810

Query: 1303 DEN 1305
            + +
Sbjct: 811  NSH 813


>gi|332832400|ref|XP_528720.3| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Pan troglodytes]
          Length = 701

 Score =  243 bits (619), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 187/634 (29%), Positives = 284/634 (44%), Gaps = 120/634 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G RF++ + I           G GCIL   MGLGKT QVI+FL  
Sbjct: 115  IPYTINRYLRDYQREGTRFLYGHYIH----------GGGCILGDDMGLGKTVQVISFLAA 164

Query: 776  AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                  RS+      +   +  LIV P++VL+NWK E   W     
Sbjct: 165  VLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW----- 219

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  + L  Y   R            +  +  ++L+
Sbjct: 220  GYFRVTVLHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 265

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G L
Sbjct: 266  WSA--VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 323

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS   F+ +F +P+E+GQ   +T  ++    +    L +++ G+  R    ++K  LP K
Sbjct: 324  GSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKK 383

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 384  EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKT 443

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
             + +    L ++ NH  +LQ            A  +S  +      +  +      DF+Q
Sbjct: 444  LYLSYLTVLQKVANHVALLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 491

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD+
Sbjct: 492  KSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRINRDKVLLFSFSTKLLDV 539

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            ++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST A
Sbjct: 540  LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTMA 585

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQ
Sbjct: 586  GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 645

Query: 1270 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            + K+ L   VV  +   R       SKE    LF
Sbjct: 646  IYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 679


>gi|443926309|gb|ELU45006.1| DNA repair and recombination protein RAD54 [Rhizoctonia solani AG-1
            IA]
          Length = 834

 Score =  243 bits (619), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 187/609 (30%), Positives = 291/609 (47%), Gaps = 101/609 (16%)

Query: 713  AVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ 768
            A ++P  I  KL    + HQ+ G++F++           + D   GCI+A  MGLGKT Q
Sbjct: 235  APKVPVVIDPKLGKILRPHQIEGVKFLYRCTTGM-----TVDNQYGCIMADEMGLGKTLQ 289

Query: 769  VIAFLYTAMRSVNLG-----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 823
             I  ++T ++    G     +   +I  P +++ NW  E +KW   +  P + F ++   
Sbjct: 290  CITLMWTLLKQSPRGAGKGTIEKCIIACPASLVKNWANELVKWL-GDSAP-KTFAIDGTG 347

Query: 824  RDRRAELLA---KW-RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI--L 877
               +A+L+A   +W +AKG          R+++    +      R +C  L  G +I  +
Sbjct: 348  T--KADLIANVRRWVQAKG----------RHVTLPVMIVSYETLRTLCEELA-GCEIGLM 394

Query: 878  VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEF 937
            +CDE H +KN+   T + L ++ C+RR+ L+G+P+QN+L EY+ +++F  + +LG+ +EF
Sbjct: 395  LCDEGHRLKNSENLTFKTLNELNCKRRVILSGTPIQNDLSEYFSLLNFANKDYLGTKNEF 454

Query: 938  RNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 997
            R  F+N I  G+  ++T ++     + S     +L G VQ   +      LP K   V+ 
Sbjct: 455  RKNFENAIIRGRDADATDKE----KEASIAKLRELSGRVQPFII------LPVKYEQVVF 504

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSN--EKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
              LSPLQ  LY+ F+     T+  V      +          L ++ NHP +L L  D  
Sbjct: 505  CALSPLQLALYRHFI-----TSPEVKKLLRGVGSQPLKAIGQLKKLCNHPALLDLPNDIA 559

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
                ED      +  M                  G    G    D               
Sbjct: 560  --GSEDILPPGYNAGM---------------LSAGGRGGGNMTPD-------------CS 589

Query: 1116 YSGKMVLL---LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
              GK V+L   LD +   +N  DK ++ S    T+DL E    KL R    G +      
Sbjct: 590  LGGKFVVLERFLDRIRRETN--DKIVLISNYTQTMDLFE----KLCRSKSYGCI------ 637

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
              RLDG    ++RQKLV+RFN+P  K     L+S++AG  GINL  ANR+I+ D  WNP 
Sbjct: 638  --RLDGTLSVAKRQKLVDRFNDPEGKEF-VFLLSSKAGGCGINLIGANRLILFDPDWNPA 694

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISK 1291
             D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ +K+ L++ VVD ++   R  S 
Sbjct: 695  SDQQALARVWRDGQKKECFVYRFVSTGTIEEKIFQRQASKQALSSCVVDEKEDTERHFSG 754

Query: 1292 EEMLHLFEF 1300
            +E+  LFE 
Sbjct: 755  DELRKLFEL 763


>gi|189529831|ref|XP_688979.3| PREDICTED: DNA repair and recombination protein RAD54B [Danio rerio]
          Length = 1174

 Score =  243 bits (619), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 184/613 (30%), Positives = 286/613 (46%), Gaps = 93/613 (15%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   ++  L+ HQ  G+ F++E ++  +R         G ILA  MGLGKT Q +  L
Sbjct: 550  VVIDPHLTNHLRPHQKEGVVFLYECLM-GMRLAGR----CGAILADEMGLGKTLQCVCVL 604

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T +R    G    ++ AL+V P +++ NW  EF KW   E   + V+    V +D R E
Sbjct: 605  WTLLRQGPYGGRPVMKRALVVCPGSLVKNWAAEFNKWLGRER--ISVYT---VDQDHRVE 659

Query: 830  LLAKWRAKGGVFLIGYTAF-------RNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
                      V +I Y          + L FG                     +L+CDE 
Sbjct: 660  DFVS-SPLCSVLVISYEMLLRSVDRLKELDFG---------------------VLICDEG 697

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN+   T  AL  + C RR+ LTG+P+QN+L E+Y +++FV  G LG+S  +R  ++
Sbjct: 698  HRLKNSNIKTAGALTALSCTRRLILTGTPVQNDLQEFYSIIEFVNPGILGTSAAYRKIYE 757

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
             PI   +  + T E+  I  +R+  L+     F  R    ++ + L  +  + +  K + 
Sbjct: 758  EPILRSRQPSCTEEERCIGEERAAELFRLTGVFTLRRTQEIINQYLSERIEWTVFCKPTE 817

Query: 1003 LQRRLYKRFLDLHGF-TNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 1061
            LQ RLY+  L           S+            AL ++ NHP +L  T      S E 
Sbjct: 818  LQIRLYRVLLSTRPIRACLSGSHTYTHSPHLVCINALKKLCNHPALLYNTLQVRMCS-EK 876

Query: 1062 AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 1121
            A++    E  +              F +  +   F   D                SGK++
Sbjct: 877  ADEMYEGEVKEL-------------FPEEYSTGAFSTAD----------------SGKLL 907

Query: 1122 LLLDILTMCS--NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1179
            +L D+L+     N  D+ ++ S    TLDL++    ++            G  W RLDG+
Sbjct: 908  VLTDLLSAIQHVNRTDRVVLVSNHTQTLDLLQDVCDQI------------GYKWCRLDGQ 955

Query: 1180 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1239
            T   +RQK+V+ FN P +      L+S++AG +G+NL  A+ +++ D  WNP  D+QA+ 
Sbjct: 956  TPVGQRQKIVDSFNSP-HSSSFLLLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMA 1014

Query: 1240 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHL 1297
            R WR GQ K V  YR +  G++EEKIY+RQV+K+GL+  VVD  ++  H + S EE+  L
Sbjct: 1015 RVWRDGQKKTVHIYRFLTTGSIEEKIYQRQVSKQGLSGTVVDLTKKAEHISFSAEELRDL 1074

Query: 1298 FEFGDDENPDPLT 1310
            F F  D N   LT
Sbjct: 1075 FRF--DPNTTCLT 1085


>gi|298705975|emb|CBJ29096.1| SNF2 family protein [Ectocarpus siliculosus]
          Length = 1288

 Score =  243 bits (619), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 189/616 (30%), Positives = 282/616 (45%), Gaps = 109/616 (17%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            I+ +L   Q  G+R+MW+   Q          G G I+   MGLGKT QV AFL  A+  
Sbjct: 415  IAQRLFQFQRTGVRWMWQLHRQ----------GAGGIVGDEMGLGKTVQVSAFL-GALHG 463

Query: 780  VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE------DVSRDRRAELLAK 833
             ++ +R ALI+ P  VL +W  E   W P     LRV +L       +       +L A 
Sbjct: 464  SSV-MRRALILCPATVLSHWMAELHIWAPQ----LRVVVLHRCVQAFNAVSGNSGKLRAL 518

Query: 834  WRAKGG----VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
             R   G    V +  Y   ++L                  L    D  V DE   I+N  
Sbjct: 519  IRRILGWPEVVVVASYEGMKSLK--------------AFLLPCNWDYCVLDEGQRIRNPD 564

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
            A+ T   KQ++   R+ LTG+P+QNNL E + + DFV  G LG+   F   F NPI  G 
Sbjct: 565  AEVTLICKQIRTVHRLILTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGG 624

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDL------PPKTVFVITVKLSPL 1003
            + N++    ++  + + +L + ++ ++ R      KKDL      P KT  V+  +L+  
Sbjct: 625  YANASPMQARLAYRCALVLRDLIQPYLLRRQ----KKDLEDIIHLPAKTEQVLFCRLTSY 680

Query: 1004 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGIL---------QLTKDK 1054
            QRRLY  FL+     +  V +  +R   F     L ++ NHP ++         +L   +
Sbjct: 681  QRRLYSEFLESTEVKS--VLSRTMRA--FRAIGILRKLCNHPDLVCRFGDSVVTRLASHQ 736

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
             +    DA +   D+         E+ ++ ND                          E+
Sbjct: 737  IWGGDSDASEKEEDDT-------AEESKSDND-------------------------HEV 764

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGK+++L  IL +    G + L+FSQ+   L +IE ++            W  G    
Sbjct: 765  QRSGKLLVLQQILPLWHKQGHRVLLFSQTRQMLSIIERFVVN--------NEWSYG---- 812

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG T    RQ L++RFN   ++ +   L++TR G +G+NL  A+RVI+ D  WNP+ D
Sbjct: 813  RLDGSTPVGNRQTLIDRFNN--DESMFIMLLTTRTGGVGVNLTGADRVILFDPDWNPSTD 870

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            +QA  R+WR GQ + V  YRL+  GT+EEKIY RQ+ K  L  RV+   +  R  S +E+
Sbjct: 871  MQARERSWRVGQRRQVTVYRLVTAGTIEEKIYHRQIFKTALTNRVLQDPKQRRMFSADEL 930

Query: 1295 LHLFEFGDDENPDPLT 1310
              LF  GDD   D  T
Sbjct: 931  GDLFTLGDDGASDGFT 946


>gi|307209151|gb|EFN86289.1| DNA excision repair protein ERCC-6 [Harpegnathos saltator]
          Length = 1005

 Score =  242 bits (618), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 182/624 (29%), Positives = 291/624 (46%), Gaps = 101/624 (16%)

Query: 699  TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 758
            + Y  N    K +   ++P SI  +L  +Q + ++++WE             + LG +L 
Sbjct: 235  SSYPENKAMHKLDNLFKVPQSIWDRLYRYQKIAVQWLWE----------LHGRKLGGLLG 284

Query: 759  HTMGLGKTFQVIAFLY----TAMRSVN---LGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
              MGLGKT QVIAFL     + + S N    GL   +++ PV ++  W + F +W P   
Sbjct: 285  DEMGLGKTVQVIAFLAGLDCSELLSHNGRFRGLGPTIVICPVTLMEQWVKHFHEWWPF-- 342

Query: 812  KPLRVFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHAL 870
              +RV +L      +   E L +    GG+ +I Y         KH KD  ++ +  +  
Sbjct: 343  --VRVVVLHHTGGYKGDPEDLIESLQTGGILIISYNGVL-----KH-KDLIISSQWHY-- 392

Query: 871  QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
                  ++ DE H I+N +   ++A+K+++   R+ LTGSP+QN+L E + + DF+  G 
Sbjct: 393  ------VILDEGHTIRNPQVKISRAVKRLQTPHRLLLTGSPMQNSLKELWSLFDFILPGK 446

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK--DL 988
            LG+   F     +PI  G + N+T        Q + +L + +  ++ R     VK    L
Sbjct: 447  LGTLPVFLEHCASPITRGGYVNATPLQEATALQVATMLKDTITPYLLRRTKTDVKHHLTL 506

Query: 989  PPKTVFVITVKLSPLQRRLYKRFL-------DLHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
            P K   V+   L+  Q++LYK++L        LH  TN   S  + R  F     AL +I
Sbjct: 507  PEKNEQVLFCSLTDEQKKLYKKYLCSEDVSFILHEKTNHHESG-RYRARFLIALSALRKI 565

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NHP +   T+              S+E++D +  + EK              G++++  
Sbjct: 566  CNHPDLFLYTR-----------QLDSEEDIDLSEELLEK-------------FGYWKR-- 599

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG 1161
                           +GKM ++  +L +    G + L+F+Q I  + ++E  L       
Sbjct: 600  ---------------AGKMTVVRSLLKIWQKQGHRVLLFTQGIQMIHILESLLQ------ 638

Query: 1162 KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                   +G  + RLDG T  S+RQ +++ FN   N      L++TR G LG+NL  ANR
Sbjct: 639  ------HEGYTYLRLDGSTAMSQRQHVIQMFNN--NPSYFVFLLTTRVGGLGLNLTGANR 690

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            VII D  WNP  D QA  RAWR GQ K V  YRL+  GT+EEK+Y RQ+ K  L+ +V+D
Sbjct: 691  VIIYDPDWNPATDAQARARAWRIGQNKQVTIYRLITAGTIEEKMYHRQIFKLLLSNKVLD 750

Query: 1282 RQQVHRTISKEEMLHLFEFGDDEN 1305
              +  R     +++ LF   +  N
Sbjct: 751  EPRQRRLFKTSDLVELFNLNEPTN 774


>gi|390457773|ref|XP_002742800.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Callithrix jacchus]
          Length = 912

 Score =  242 bits (618), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 188/635 (29%), Positives = 283/635 (44%), Gaps = 123/635 (19%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G +F++ + I           G GCIL   MGLGKT QVI+FL  
Sbjct: 327  IPYTINRYLRDYQREGAQFLYGHYIH----------GRGCILGDDMGLGKTVQVISFLAA 376

Query: 776  A------------------MRSVN-----LGLRTALIVTPVNVLHNWKQEFMKWRPSELK 812
                               +RS+N        +  LIV P++VL+NWK E   W      
Sbjct: 377  VLQKKGTREDIENNMPEFLLRSMNKEPSSTAKKIFLIVAPLSVLYNWKDELDTW-----G 431

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
              RV +L    +D   EL+   + K  + L  Y   R                +C    +
Sbjct: 432  YFRVTVLHGNRKDN--ELIRVKQRKCEIALTTYETLR----------------LCLDELN 473

Query: 873  GPD--ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 930
              +   ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+   G 
Sbjct: 474  SVEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGL 533

Query: 931  LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 990
            LGS+  F+ +F +P+E+GQ   +T  ++    +    L +++ G+  R    ++K  LP 
Sbjct: 534  LGSNSYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPK 593

Query: 991  KTVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIR 1028
            K   ++   L+  Q+ +Y+  L+    T                            E ++
Sbjct: 594  KEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCSSGRKRRNCCYKTNSHGETVK 653

Query: 1029 KSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFL 1088
              + +    L ++ NH  +LQ            A  +S  +      +  +      DF+
Sbjct: 654  TLYLSYLTVLQKVANHVALLQ------------AVSTSKQQETLIKRICDQVFSRFPDFV 701

Query: 1089 QGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLD 1148
            Q   D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD
Sbjct: 702  QKTKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLD 749

Query: 1149 LIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTR 1208
            +++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST 
Sbjct: 750  VLQQYCM------------ASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTM 795

Query: 1209 AGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKR 1268
            AG LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y R
Sbjct: 796  AGGLGLNFIGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLR 855

Query: 1269 QVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            QV K+ L   VV  +   R       SKE    LF
Sbjct: 856  QVYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 890


>gi|443708226|gb|ELU03433.1| hypothetical protein CAPTEDRAFT_20149 [Capitella teleta]
          Length = 777

 Score =  242 bits (618), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 180/563 (31%), Positives = 266/563 (47%), Gaps = 93/563 (16%)

Query: 754  GCILAHTMGLGKTFQVIAFLY------TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWR 807
            G IL   MGLGKT QVIAFL        A+   + GL  +L++ P  VLH W +EF KW 
Sbjct: 10   GGILGDEMGLGKTIQVIAFLAGLENSQLALGRESRGLGPSLVICPTTVLHQWVKEFHKWW 69

Query: 808  PSELKPLRVFMLEDVSRDRRAE--LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMARE 865
            P      RV +L        +E  L+       G+ +  Y+     S   H +D  + + 
Sbjct: 70   PQR----RVAVLHHSGSYSGSEVNLIRSIIGAKGILVTAYS-----SVLLH-QDLLLPQS 119

Query: 866  ICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF 925
              +A        + DE H I+N  A  T A KQ+K   R+ L+GSP+QNNL E + + DF
Sbjct: 120  WHYA--------ILDEGHKIRNPNAQITVACKQLKTCHRVILSGSPVQNNLKELWSLFDF 171

Query: 926  VREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVV 984
            +  G LG+  +F   F  PI  G ++N+T   V+   + + +L + +  ++ +RM  +V 
Sbjct: 172  IFPGKLGTLPDFMQHFSVPIVQGGYSNATQVAVQTAYKCACVLRDTINPYLLRRMKADVK 231

Query: 985  KK-DLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF--FAGYQALAQI 1041
            +   LP K   V+  +L+  QR +YK +LD       +  N  +   F  F G   L ++
Sbjct: 232  ESLSLPAKNEQVLFCRLTEHQREVYKEYLD------SKECNSILSGGFMVFPGLVTLRKV 285

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NHP +       G PS    +D   +    +                     GF+++  
Sbjct: 286  CNHPDL-----STGGPSLFHVDDEEEEAAKKF---------------------GFWKR-- 317

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG 1161
                           SGKM +L  +L +      + L+FSQS   L++++ Y+ +     
Sbjct: 318  ---------------SGKMQVLDPLLRLWKKQNHRVLLFSQSRQMLEILQSYVEE----- 357

Query: 1162 KQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1221
                   +G  + R+DG T  S RQ L+  FNE  +  V   L++TR G LGINL  ANR
Sbjct: 358  -------RGYVYRRMDGGTPISARQPLINSFNE--DPSVFIFLLTTRVGGLGINLTGANR 408

Query: 1222 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            V+I D  WNP+ DLQA  RAWR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+ 
Sbjct: 409  VVIYDPDWNPSTDLQARERAWRIGQLKDVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLK 468

Query: 1282 RQQVHRTISKEEMLHLFEFGDDE 1304
              +  R     ++  LF   DD+
Sbjct: 469  DPKQRRFFKANDLYELFTLTDDD 491


>gi|255077082|ref|XP_002502193.1| SNF2 super family [Micromonas sp. RCC299]
 gi|226517458|gb|ACO63451.1| SNF2 super family [Micromonas sp. RCC299]
          Length = 786

 Score =  242 bits (618), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 199/648 (30%), Positives = 294/648 (45%), Gaps = 88/648 (13%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKG--LGCILAHTMGLGKTFQVI 770
            AV +   I+ KL+ HQ  G+R+M+  ++  +      D G   GC+LA  MGLGK+ Q I
Sbjct: 106  AVVVDPYIAGKLRPHQREGVRWMYR-VLHGLEP----DAGPHTGCLLADDMGLGKSLQSI 160

Query: 771  AFLYTAMRSVNLGLRTA---LIVTPVNVLHNWKQEFMKWRPSELKPLRV-FMLEDVSRDR 826
            A ++T ++    G+ TA   L+V P +++  W  EF KW    L  +R    L +     
Sbjct: 161  ALVWTMLKQGPRGVPTAKRVLLVCPASLVGAWGAEFNKW----LGGVRAQAALAEGGGVD 216

Query: 827  RAELLAKWR--AKGG---------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPD 875
             A+   KWR   + G         V +  Y   R LS                A +  PD
Sbjct: 217  AADAYEKWRRGTQPGTESAFDCWPVLVTSYETLRRLS--------------PIAARAEPD 262

Query: 876  ILVCDEAHMIKNTR--ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
            +L+CDEAH ++N +  + T  AL+ V   RR+ LTG+P+QNNL EY  ++DF   G LG 
Sbjct: 263  LLICDEAHRLRNAQQGSQTLAALRAVDVPRRVLLTGTPIQNNLDEYAAVMDFACPGLLGP 322

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
              EF  RF  P++ G   N+TS DV    + ++ L     G V R + ++    LP KT 
Sbjct: 323  VAEFHRRFTAPVQRGSEPNATSADVAGAQRAANELARLTAGRVLRREASINAAHLPAKTE 382

Query: 994  FVITVKLSPLQRRLYKRFLDL-HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
             V+  K + +QR +Y++   +  G+T  +        +       L Q+ N   + Q+ K
Sbjct: 383  MVVFCKPTEMQRAMYEQGAKIVQGWTEGKAGASTATAAALCAIGLLRQLANS--VDQVVK 440

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDD------GFFQKDWWNDL- 1105
                 S+  ++    +E+        EK  +      G   D      G   KD  +DL 
Sbjct: 441  KTSAKSKRGSKGGFDNESPPSKQARIEKEDDNGGLSDGDESDEGEISAGSSTKD-ADDLR 499

Query: 1106 ------LHEHTYKELDYSGKMVLLLDILT-MCSNM---GDKSLVFSQSIPTLDLIEFYLS 1155
                  +       +  SGK+  L  +L  M SN    G++ +V S     LDL     +
Sbjct: 500  AKLSSSVPSGYSGGVKGSGKLATLRTLLREMASNSSGDGERMVVVSGFSAALDLAAGLCA 559

Query: 1156 KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGIN 1215
            +L            G    RLDGR     R  LV  FN     RV   L+S  AG  G+N
Sbjct: 560  EL------------GLATDRLDGRVPPDARSGLVRNFNAGRGGRV--MLLSCVAGGAGLN 605

Query: 1216 LHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGL 1275
            L  A R+++ D SWNP +D QA+ R WR GQT+PV  YRL+A GT+EEK+++RQ+ K   
Sbjct: 606  LVGACRLVLFDTSWNPAHDNQAMARVWRDGQTRPVTIYRLLAAGTVEEKVFQRQLLKHRE 665

Query: 1276 AARV----------VDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVS 1313
            AA              +  V R  +++E+  L  F     P  LTAV 
Sbjct: 666  AAAAGYGGESIGGDGGKTDVGR-FTRDELSELVRFSSPAKPATLTAVG 712


>gi|367051024|ref|XP_003655891.1| hypothetical protein THITE_2120135 [Thielavia terrestris NRRL 8126]
 gi|347003155|gb|AEO69555.1| hypothetical protein THITE_2120135 [Thielavia terrestris NRRL 8126]
          Length = 1161

 Score =  242 bits (618), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 185/621 (29%), Positives = 283/621 (45%), Gaps = 122/621 (19%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  +R+P  I   L  +Q  G++++ E   Q +          G I+   MGLGKT Q+I
Sbjct: 363  ENGLRLPGDIYPSLFDYQKTGVQWLAELYAQQV----------GGIVGDEMGLGKTVQLI 412

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR---- 826
            +F+  A+    +  +  ++V P  VL  W  EF +W P    PLRV +L           
Sbjct: 413  SFV-AALHYSKMLHKPVIVVAPATVLRQWVNEFHRWWP----PLRVSILHSSGSGMFNVH 467

Query: 827  -RAEL---LAKWRAKGGVFLIGYTAFRNLSFGKHVKDR-----NMAREICHALQDGPDIL 877
               EL   +  W  K           R+    K + DR     ++       LQ   DIL
Sbjct: 468  DEGELEDHVDDWDNK--------KPTRSSKAAKKIVDRVVKNGHVLVTTYAGLQTYGDIL 519

Query: 878  --------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
                    V DE H I+N     T   K+++   RI L+G+P+QNNL E + + DF+   
Sbjct: 520  IPVDWGYAVLDEGHKIRNPNTAITIYCKELRTPNRIILSGTPMQNNLTELWSLFDFIYPM 579

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDL 988
             LG+   FRN+F+ PI  G + N+T+  +    + +  L E ++ ++ QR+ ++V   DL
Sbjct: 580  RLGTLVAFRNQFEIPIRLGGYANATNLQIMTAQKCAETLKETIRPYLLQRLKVDVAA-DL 638

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSN--EKIRKSFFAGYQALAQIWNHPG 1046
            P K+  V+  KLS  QR  Y+ FL      +D +++   + R+S + G   L +I NHP 
Sbjct: 639  PKKSEQVLFCKLSRSQREAYELFL-----KSDEMASILNRTRQSLY-GIDILRKICNHPD 692

Query: 1047 ILQ--LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 1104
            +L   L    GY                                             W D
Sbjct: 693  LLDPALKTKPGY--------------------------------------------QWGD 708

Query: 1105 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQG 1164
            +           SGKM ++  +L M   +G K+L+F Q +  LD+IE ++ +L       
Sbjct: 709  V---------SKSGKMAVVQSLLPMWKRLGHKTLLFCQGVQMLDIIEAFVRRL------- 752

Query: 1165 KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
                    + R+DG+T   +RQ LV++FN   +  +   L++T+ G LG+NL  ANRVII
Sbjct: 753  ----DNITYIRMDGKTPVKQRQALVDQFN--TDAGLDVFLLTTKVGGLGVNLTGANRVII 806

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
             D  WNP+ D+QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +V+   +
Sbjct: 807  FDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKVLKDPK 866

Query: 1285 VHRTISKEEMLHLFEFGDDEN 1305
               T    ++  LF     E+
Sbjct: 867  QQTTFHLNDLQDLFSLSSYED 887


>gi|194386250|dbj|BAG59689.1| unnamed protein product [Homo sapiens]
          Length = 567

 Score =  242 bits (618), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 272/555 (49%), Gaps = 83/555 (14%)

Query: 757  LAHTMGLGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            +A  MGLGKT Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++P
Sbjct: 1    MADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQP 60

Query: 814  LRVFMLEDVSRDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
            L +   +  S+D   + L  +      R    + +I Y  FR L  G             
Sbjct: 61   LAI---DGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFR-LHVG------------- 103

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              LQ G   +++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV
Sbjct: 104  -VLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFV 162

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
              G LG++HEF+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K
Sbjct: 163  NSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSK 222

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG 1046
             LP K   V+  +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP 
Sbjct: 223  YLPVKIEQVVCCRLTPLQTELYKRFLR-QAKPAEELLEGKMSVSPLSSITSLKKLCNHPA 281

Query: 1047 ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 1106
            ++                        Y+  + E+     D   G  D   F   + +  L
Sbjct: 282  LI------------------------YDKCVEEE-----DGFVGALD--LFPPGYSSKAL 310

Query: 1107 HEHTYKELDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK 1165
                  E   SGKM++L  IL +  S   DK ++ S    TLDL E             K
Sbjct: 311  ------EPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------K 351

Query: 1166 LWKKGKDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
            L +  +  Y RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++
Sbjct: 352  LCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVM 410

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
             D  WNP  D QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q
Sbjct: 411  FDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQ 470

Query: 1285 -VHRTISKEEMLHLF 1298
             V R  S  E+  LF
Sbjct: 471  DVERHFSLGELKELF 485


>gi|332222825|ref|XP_003260570.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
            isoform 1 [Nomascus leucogenys]
          Length = 701

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 187/634 (29%), Positives = 282/634 (44%), Gaps = 120/634 (18%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G RF++ + I           G GCIL   MGLGKT QVI+FL  
Sbjct: 115  IPYTINRYLRDYQREGARFLYGHYIH----------GRGCILGDDMGLGKTVQVISFLAA 164

Query: 776  AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                  RS+      +   +  LIV P++VL+NWK E   W     
Sbjct: 165  VLHKKGTREDIENNMPEFLLRSMKKEPPSSTAKKMFLIVAPLSVLYNWKDELDTW----- 219

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV +L    +D   EL+   + K  + L  Y   R            +  +  ++L+
Sbjct: 220  GYFRVTILHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 265

Query: 872  DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 931
                 ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN  E +C++D+   G L
Sbjct: 266  WSA--VIVDEAHRIKNPKARVTEVMKALKCSVRIGLTGTILQNNTKELWCVMDWAVPGLL 323

Query: 932  GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 991
            GS   F+ +F +P+E GQ   +T  ++    +    L +++ G+  R    ++K  LP K
Sbjct: 324  GSRTYFKKQFSDPVEQGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKK 383

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 1029
               ++   L+  Q+ +Y+  L+    T                            E ++ 
Sbjct: 384  EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGRKRRNCCYKTNSHGETVKT 443

Query: 1030 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
             + +    L ++ NH  +LQ            A  +S  +      +  +      DF+Q
Sbjct: 444  LYLSYLTVLQKVANHVALLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 491

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
               D  F             T  +  YSGKM +L  +L  C    DK L+FS S   LD+
Sbjct: 492  KSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 539

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
            ++ Y                G D+ RLDG T+S ER K+V+ FN    + V   L+ST A
Sbjct: 540  LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTMA 585

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+N   AN V++ D +WNP  DLQAI RA+R GQ + V   RL++ GT+EE +Y RQ
Sbjct: 586  GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 645

Query: 1270 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            + K+ L   VV  +   R       SKE    LF
Sbjct: 646  IYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 679


>gi|449296949|gb|EMC92968.1| hypothetical protein BAUCODRAFT_42604, partial [Baudoinia
            compniacensis UAMH 10762]
          Length = 1182

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 177/611 (28%), Positives = 289/611 (47%), Gaps = 103/611 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  +R+P  I   L  +Q  G++++WE   Q +          G I+   MGLGKT Q+I
Sbjct: 361  EGGLRVPGDIYPSLFDYQKTGVQWLWELYSQQV----------GGIIGDEMGLGKTIQII 410

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVS 823
            +FL +   S  L  +  ++V P  V+  W  EF +W P    PLRV +L        D+ 
Sbjct: 411  SFLASLHYSDKL-TKPIIVVCPATVMKQWVNEFHRWWP----PLRVSILHTSGSGMLDIK 465

Query: 824  RDRRAE---LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL--- 877
            R+ R E    +  +  K      G+ A + +   + V+D ++       LQ   ++L   
Sbjct: 466  REARIEDDLEVDMYGRKKATMNKGHKAAKRI-VDRVVRDGHVLVTTYSGLQTYAELLIPT 524

Query: 878  -----VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                 V DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG
Sbjct: 525  DWEYAVLDEGHKIRNPNTAITIYCKELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLG 584

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNVVKKDLPPK 991
            +   FR++F+ PI+ G + N+++  V+   + +  L + +  + +QR  ++V   DLP K
Sbjct: 585  TLVNFRSQFEIPIKQGGYANASNLQVETAMKCAETLKDTISPYLLQRFKVDVA-ADLPKK 643

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
            +  V+  KL+ LQR  Y+ FL     + +  S    ++    G   L +I NHP ++   
Sbjct: 644  SERVLFCKLTKLQREAYEWFL----ASEEMKSILSGKRQALYGVDILRKICNHPDLV--- 696

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                       E  +  +   YN   G K                               
Sbjct: 697  -----------EHKTLSKKAGYNYGSGHK------------------------------- 714

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
                 SGKM ++  +L +    G K+L+F+Q    LD++E ++  +            G 
Sbjct: 715  -----SGKMQVVKALLEIWKRDGHKTLLFAQHRIMLDILETFIQGM-----------DGF 758

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
            ++ R+DG T   +RQ LV+ FN+  ++ +   L++T+ G LG+NL  A+RVII D  WNP
Sbjct: 759  NYRRMDGNTSIKDRQDLVDEFNK--DQDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNP 816

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            + D+QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T   
Sbjct: 817  STDVQARERAWRLGQKREVEIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPRQRQTFQL 876

Query: 1292 EEMLHLFEFGD 1302
             ++  LF  G+
Sbjct: 877  RDLHDLFTLGE 887


>gi|327271091|ref|XP_003220321.1| PREDICTED: DNA repair and recombination protein RAD54-like [Anolis
            carolinensis]
          Length = 906

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 186/617 (30%), Positives = 296/617 (47%), Gaps = 86/617 (13%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            + + +EK    V +   +S  L+ HQ  G++F+WE +  + R++       GCI+A  MG
Sbjct: 294  LKIDKEKFPVHVVVDPVLSRVLRPHQREGVKFLWECV--TGRRILGSH---GCIMADEMG 348

Query: 763  LGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV--F 817
            LGKT Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++PL +   
Sbjct: 349  LGKTLQCITLMWTLLRQSPDCKPEIDKAIVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGG 408

Query: 818  MLEDVSRDRRAELLAK-WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA--LQDG- 873
              ED+ R     +  +  R    + +I Y  FR                  HA  LQ G 
Sbjct: 409  SKEDIDRKLAGFMNQRGLRVPSPILIISYETFR-----------------LHAEVLQKGN 451

Query: 874  PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
              +++CDE H +KN+   T QAL ++   RR+ ++G+P+QN+L+EY+ +V FV  G LG+
Sbjct: 452  VGLVICDEGHRLKNSDNQTYQALYKLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 511

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 993
            + EF+  F+ PI  G+  +++        +R   L   +   + R   +++ K LP K  
Sbjct: 512  AQEFKKHFEIPILKGRDADASEAGRHKGEERLKELISIVNRCLIRRTSDILSKYLPVKIE 571

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD 1053
             V+  +L+PLQ  LYK+FL       D +   KI  S  +   +L ++ NHP ++     
Sbjct: 572  QVVCCRLTPLQSELYKQFLKQAKPAED-LKEGKISVSSLSSITSLKKLCNHPALIH---- 626

Query: 1054 KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE 1113
                      D   +E   +   +G     +  F  G +                    E
Sbjct: 627  ----------DKCVEEEEGF---VGA----LKLFPPGYSTKSL----------------E 653

Query: 1114 LDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
               SGKM++L  IL +  S   DK ++ S    TLDL E             KL +  + 
Sbjct: 654  PQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFE-------------KLCRNRRY 700

Query: 1173 WY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
             Y RLDG     +R K+VE FN  ++      ++S++AG  G+NL  ANR+++ D  WNP
Sbjct: 701  LYVRLDGTMSIKKRAKVVEHFNS-VSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNP 759

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTIS 1290
              D QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S
Sbjct: 760  ANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFS 819

Query: 1291 KEEMLHLFEFGDDENPD 1307
              E+  LF   +    D
Sbjct: 820  LGELKELFTLNETTTSD 836


>gi|302307807|ref|NP_984563.2| AEL297Wp [Ashbya gossypii ATCC 10895]
 gi|299789178|gb|AAS52387.2| AEL297Wp [Ashbya gossypii ATCC 10895]
          Length = 895

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 178/566 (31%), Positives = 273/566 (48%), Gaps = 85/566 (15%)

Query: 754  GCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PS 809
            GCI+A  MGLGKT Q IA ++T +R  + G  T    +IV P ++++NW  E +KW  P 
Sbjct: 325  GCIMADEMGLGKTLQCIALMWTLLRQGSQGRPTIEKCIIVCPSSLVNNWANEIVKWLGPD 384

Query: 810  ELKPLRV-FMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNM 862
             L PL +      +S    A+ + +W    G      V +I Y   R          RN+
Sbjct: 385  ALSPLAIDGRKSSLSNGSVAQSVRQWAIAQGRNVVKPVLIISYETLR----------RNV 434

Query: 863  AREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
              E     + G  +++ DE H +KN  + T  +L  + C RR+ L+G+P+QN+L EY+ +
Sbjct: 435  --ENLKGCKVG--LMLADEGHRLKNGDSLTFTSLDSINCPRRVILSGTPIQNDLSEYFAL 490

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
            ++F   G LG+  +FR  F+ PI  G+  ++T +++     + H L + +  F+ R   +
Sbjct: 491  LNFSNPGLLGTRAQFRKNFEIPILRGRDADATDKEIAAGEVKLHELSQIVSKFIIRRTND 550

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            ++ K LP K   ++ V LSP+Q+ +Y+ F+          S E  +     G Q L  I 
Sbjct: 551  ILSKYLPCKYEHILFVNLSPMQKAIYEHFVR---------SREVAKLMKGTGSQPLKAIG 601

Query: 1043 ------NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGF 1096
                  NHP +L L  +    +    +D  S   M +N   G                  
Sbjct: 602  LLKKLCNHPDLLDLPDEIAGSTNLIPDDYQS--AMTHNSRGGR----------------- 642

Query: 1097 FQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN-MGDKSLVFSQSIPTLDLIEFYLS 1155
                        H   +  +S K  +L   L    +   DK ++ S    TLDLIE    
Sbjct: 643  -----------SHVEVQTTHSSKFAILERFLFKIKHESNDKIVLISNYTQTLDLIE---- 687

Query: 1156 KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGIN 1215
            K+ R    G L        RLDG    ++RQKLV++FN+P  +     L+S++AG  GIN
Sbjct: 688  KMCRYNHYGVL--------RLDGTMTINKRQKLVDKFNDPSGEEF-IFLLSSKAGGCGIN 738

Query: 1216 LHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGL 1275
            L  ANR+I++D  WNP  D QA+ R WR GQ K  F YR +  G++EEKIY+RQ  K  L
Sbjct: 739  LIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFITTGSIEEKIYQRQSMKMSL 798

Query: 1276 AARVVD-RQQVHRTISKEEMLHLFEF 1300
            ++ VVD ++ V R  S + +  LF+F
Sbjct: 799  SSCVVDEKEDVERLFSSDNLRQLFQF 824


>gi|212533393|ref|XP_002146853.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces marneffei ATCC
            18224]
 gi|210072217|gb|EEA26306.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces marneffei ATCC
            18224]
          Length = 1054

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 175/589 (29%), Positives = 280/589 (47%), Gaps = 84/589 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            +S  L+ HQ  G++F++E ++  +R       G G ILA  MGLGKT Q I  L+T ++ 
Sbjct: 308  LSKHLREHQREGVKFLYECVM-GLRDYN----GEGAILADEMGLGKTLQTITLLWTLLKQ 362

Query: 780  -----VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
                  +  ++ ALIV PV +++NW++EF KW  +E   + VF+ +D    +R +L    
Sbjct: 363  NPIYEASPVIKKALIVCPVTLINNWRKEFRKWLGNER--IGVFVFDD----KRKKLTDFT 416

Query: 835  RAKG-GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
              K   + ++GY   R       V+D  +          G DI++ DE H +K  +  + 
Sbjct: 417  MGKAYNIMIVGYEKLRT------VQDGLLKGH-------GVDIVIADEGHRLKTVQNKSG 463

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            QA++ +   +RI L+G+P+QN+L E++  VD V  G LG+   F   F+ PI   Q   +
Sbjct: 464  QAIQALNTAKRIILSGTPIQNDLSEFFAAVDLVNPGILGTYRNFMKEFEGPIVRSQQPEA 523

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
            T  D++    R   L E    F+ R   +V+ K LPPKT +VI    + +Q  +Y+  L 
Sbjct: 524  TMRDIEKGEARGEELRELTSMFILRRTADVLSKYLPPKTEYVILCNPTSVQASIYRHVLG 583

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
               F +   + E      F+    L ++ N P +L             A D   +  M+ 
Sbjct: 584  SPIFQSALGNTE----GAFSLLTVLKKLCNSPSLLT----------AKAGDEPPNATMEA 629

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSN 1132
             ++    P     F                             SGK+ +L  +L  + + 
Sbjct: 630  -LLSTLTPSLRRQF-------------------------SPSSSGKIRVLDQLLHNLQTT 663

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
              +K ++ S    TL+L+   L+ L  P            + RLDG T S++RQ LV+ F
Sbjct: 664  TSEKIVLVSNYTSTLNLLGILLTSLSLP------------FLRLDGSTPSAKRQSLVDDF 711

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N     +    L+S +AG  G+NL  A+R+++ D  WNP  DLQA+ R  R GQ +  + 
Sbjct: 712  NRAPASKCFAFLLSAKAGGTGLNLTGASRLVLFDVDWNPATDLQAMARIHRDGQKRHCYI 771

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT-ISKEEMLHLFEF 1300
            YR+M  G +EEKI++RQVTK GLA  V++ +  +    S+EE+  LF  
Sbjct: 772  YRIMLKGALEEKIWQRQVTKIGLADSVMESKSSNMAQFSREELKDLFRL 820


>gi|7384851|dbj|BAA93079.1| Rad54 homolog [Neurospora crassa]
          Length = 834

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 181/599 (30%), Positives = 289/599 (48%), Gaps = 94/599 (15%)

Query: 702  IVNVVREKGEEAVRIPSSISAKL----KAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I+ + ++   E  R+P  I  +L    + HQ+ G+RFM+  +   I      +K  GCI+
Sbjct: 199  ILGIKKKVEGEHPRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMI-----DEKANGCIM 253

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LK 812
            A  MGLGKT Q I  L+T ++ S + G   ++ A++  P +++ NW  E +KW  ++ + 
Sbjct: 254  ADEMGLGKTLQCITLLWTLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADAIT 313

Query: 813  PLRV---FMLEDVSRDRRAELLAKWRA-KGGVFLIGYTAFR-NLSFGKHVKDRNMAREIC 867
            P  +      E+++R  R   +A  R+    V ++ Y   R N+                
Sbjct: 314  PFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVD--------------- 358

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              L+  P  +++CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ ++   
Sbjct: 359  -ELKGTPIGLMLCDEGHRLKNGDSQTFSALNSLNVSRRVILSGTPIQNDLSEYFALITVA 417

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
                LG+  EFR RF+ PI  G+H +++  + K  ++    L   +  F+ R   +++ K
Sbjct: 418  NPDLLGTRLEFRKRFEIPILRGRHADASEAERKRGDECLVELLAIVNKFIIRRTNDILSK 477

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWN 1043
             LP K   V+   L+P Q  LY  F+   D+      + S              L ++ N
Sbjct: 478  YLPVKYEHVVFCNLAPFQLDLYNYFVASPDIQALLRGKGSQP------LKAINILKKLCN 531

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
            HP +L L+ D     +   ED    E                   +G++ D    K W  
Sbjct: 532  HPDLLDLSADLPGCEQYWPEDYVPKE------------------ARGRDRD---VKPW-- 568

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
                        YSGKM +L  +L  + ++  DK ++ S    TLDL E    +L R  +
Sbjct: 569  ------------YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFE----RLCRNRQ 612

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
             G L        RLDG    ++RQKLV++FN+P        L+S++AG  G+NL  ANR+
Sbjct: 613  YGCL--------RLDGTMNVNKRQKLVDKFNDPEGDEF-VFLLSSKAGGCGLNLIGANRL 663

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            ++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VVD
Sbjct: 664  VLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVD 722


>gi|363732948|ref|XP_420137.3| PREDICTED: excision repair cross-complementing rodent repair
            deficiency, complementation group 6-like [Gallus gallus]
          Length = 1280

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 189/609 (31%), Positives = 287/609 (47%), Gaps = 92/609 (15%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            + AKL  HQ  G+ F++       R  + G  G   ILA  MGLGKT Q+IAFL + M  
Sbjct: 88   MHAKLFQHQREGVAFLY-------RLHREGRPG--GILADDMGLGKTIQIIAFL-SGMFD 137

Query: 780  VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG 839
              L +R  L++ P  ++ +W  EF +W P     LRV      S+  R   L K + K G
Sbjct: 138  SEL-IRHVLLIMPTTLVSSWLAEFARWTPG----LRVKEFHGTSKTERTRNLEKIQRKNG 192

Query: 840  VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQV 899
            + +  Y    N         + +A   CH      D ++ DEAH IK     TT+ +  +
Sbjct: 193  IVITSYQMLIN-------NWKQLAS--CHGQDFVWDYIILDEAHKIKCPSNKTTKCVYAI 243

Query: 900  KCQRRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
              + R+ LTG+PLQNNL E + + DF  +G  LG++  FR  ++NPI   +  ++T  + 
Sbjct: 244  PAKHRLLLTGTPLQNNLQEMWSLFDFACQGSLLGTAKTFRMEYENPITRAREKDATVGEK 303

Query: 959  KIMNQRSHILYEQLKGFVQRMDMNVVKKD-----------------------LPPKTVFV 995
             +  + S  L   +K +  R   + +KK+                       L  K  FV
Sbjct: 304  ALGLKISENLMTIIKPYFLRRTKDDIKKNHAEKSDTPLPEDPREPSAPVMPSLTRKNDFV 363

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            + V L+P+Q ++Y+ FL L        +     +S  A    L ++ +HP +L       
Sbjct: 364  VWVYLAPVQEKIYRNFLCLDHVKEVLTTT----RSPLAELTVLKKLCDHPRLL------- 412

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
                  +  + +  ++D    + +   +    L G N           D L + T   + 
Sbjct: 413  ------SARACTQLDLDGQEYLEQDHESEAAVLSGANK---------IDHLSDETL--IQ 455

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM+ L+ +L      G ++LVFSQS   LD+IE  LS      +Q K+        R
Sbjct: 456  ESGKMLFLVGLLGRLREEGHRTLVFSQSRKMLDIIERVLS-----SRQFKIM-------R 503

Query: 1176 LDGR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            +DG  T  +ER+K +  F    NK     L++T+ G +GI L +ANRV+I D SWNP  D
Sbjct: 504  IDGTVTHLTEREKRINAFQS--NKDYSVFLLTTQVGGVGITLTAANRVVIFDPSWNPATD 561

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTISKEE 1293
             QA+ RA+R GQ + V  YRL+  GT+EEKIY+RQV K+ L  +   D++   R  SK+E
Sbjct: 562  AQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSKQE 621

Query: 1294 MLHLFEFGD 1302
            +  LF   D
Sbjct: 622  LRELFTLED 630


>gi|328698146|ref|XP_001952559.2| PREDICTED: DNA excision repair protein ERCC-6 [Acyrthosiphon pisum]
          Length = 1136

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 174/627 (27%), Positives = 287/627 (45%), Gaps = 118/627 (18%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            +  ++P  I  KL  +Q +GI+++WE             +G G IL   MGLGKT Q+I 
Sbjct: 277  DYFKVPKEIWEKLYKYQKIGIKWLWE----------LHQQGSGGILGDEMGLGKTIQMIV 326

Query: 772  F---LY--------TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE 820
            F   LY        T +R    GL  +LIV P  ++H W +EF KW P    P+RV +L 
Sbjct: 327  FFGALYWSRLKDKITGIR----GLGPSLIVCPATLMHQWVEEFHKWCP----PIRVVVLH 378

Query: 821  D--VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV 878
            +  V + +  +L+ +  +  G+ +  Y                + + I + L++    ++
Sbjct: 379  ETGVYKGKPGDLIKEVWSSKGILITTYNG--------------LLQHINNLLKNNWHYVI 424

Query: 879  CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFR 938
             DE H I+N  +  T A KQ+K   RI ++GSP+QN+L E + + DF+    LG+   F 
Sbjct: 425  LDEGHKIRNPDSKITVAAKQLKSSHRIIISGSPIQNHLKELWSLFDFIFPSKLGTLPAFI 484

Query: 939  NRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNVVKK-DLPPKTVFVI 996
              F  PI +G + N+T   +    + + IL + +  + ++RM  ++     LP K   V+
Sbjct: 485  KSFAVPITHGGYANATELQITTAYKCATILKDTISPYLLRRMKADIQSHISLPDKNEQVL 544

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              +L+  Q+ +Y+ +L+ H      + N   +   F G   L  I NHP I Q   + G 
Sbjct: 545  FCRLTEEQKTMYRGYLE-HSDIISEIMNGSCK--VFVGISRLRTICNHPDIFQTNLETG- 600

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
                                                  G+++K                 
Sbjct: 601  ------------------------------------AFGYWKK----------------- 607

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            SGKM+++  +L M    G + L+F+QS+  L++ + ++             ++   + +L
Sbjct: 608  SGKMIVVEALLKMWKKQGHRVLLFTQSVKMLNIFQKFII------------EQNYSYLKL 655

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            +G T    RQ ++ +FN+  +  +   +++T+ G LG+NL  A+RVII D  WNP  DLQ
Sbjct: 656  EGATSIGSRQPIINKFNK--DPSIFVMILTTKVGGLGVNLIGADRVIIFDPDWNPATDLQ 713

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            A  RAWR GQT  V  YRL+  GT+EEKIY RQ+ K+ L+ +V+   +  R      +  
Sbjct: 714  ARERAWRIGQTNSVTIYRLLTAGTIEEKIYHRQIFKQFLSNKVLVDPKQRRFFKSNYLYE 773

Query: 1297 LFEFGDDENPDPLTAVSKENGQGSSQN 1323
            LF   D ++   +       G GS  N
Sbjct: 774  LFTLQDVDDNGVVETTDLFAGTGSEIN 800


>gi|302814766|ref|XP_002989066.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii]
 gi|300143167|gb|EFJ09860.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii]
          Length = 1043

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 185/628 (29%), Positives = 280/628 (44%), Gaps = 134/628 (21%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  +RIP  I  +L  +Q  G++++WE  + S++         G I+   MGLGKT QVI
Sbjct: 283  EGGLRIPLDIYDRLFDYQKTGVKWLWE--LHSLKT--------GGIIGDEMGLGKTVQVI 332

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE---------- 820
            AFL     S       +++V PV +   WK+E  KW P       V ++           
Sbjct: 333  AFLAALHHSRMYS--PSIVVCPVTLTFQWKREVEKWYPK----FDVQVVHESAAPKGKKK 386

Query: 821  -------------DVSRDRRAELLAKW--------RAKGGVFLIGYTAFRNLSFGKHVKD 859
                         D  RD R   LA+W        R+  G+ +  Y   R L      KD
Sbjct: 387  EAEDSDASGDDSGDAKRDAR---LARWDGVVEKTVRSPSGLIVTTYEQLRLL------KD 437

Query: 860  RNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 919
              +  +  +A        V DE H I+N  A+TT   KQ++   RI +TG+P+QN L E 
Sbjct: 438  TLLDIDWGYA--------VLDEGHRIRNPDAETTLICKQLQTVHRIIMTGAPIQNKLTEL 489

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 979
            + + DFV  G LG    F+ +F  PI  G + N+TS  V    + +  L + +  ++ R 
Sbjct: 490  WSLFDFVFPGKLGVLPVFQAQFALPISIGGYANATSLQVSTAYKCAVTLRDLIMPYILRR 549

Query: 980  DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALA 1039
              + V+  L  KT  V+   L+  QR  Y+ FL     ++D     +  K+   G   L 
Sbjct: 550  MKSDVEAKLTKKTEHVLFCSLTETQRACYRAFL----ASSDVERIFEGSKNALYGIDILR 605

Query: 1040 QIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK 1099
            +I NHP +L              E  +S+++ DY +                        
Sbjct: 606  KICNHPDLL--------------EREASEKHADYGLP----------------------- 628

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
                           D SGK++++  +L    + G + LVF Q+   LD++E ++     
Sbjct: 629  ---------------DRSGKLMVVSQVLNSWKDQGHRVLVFCQTQQMLDIVEIFVES--- 670

Query: 1160 PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
                     +G  + R+DG T   +R  L++ FNE  +  V   L++T+ G LG NL  A
Sbjct: 671  ---------QGYTYRRMDGSTSVKQRPALIDEFNE--SSHVFVFLLTTKVGGLGTNLTGA 719

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            NRVII D  WNP+ D+QA  RAWR GQTK V  YRL+  GT+EEK+Y RQ+ K+ L  ++
Sbjct: 720  NRVIIFDPDWNPSTDMQARERAWRIGQTKDVIVYRLITRGTIEEKVYHRQIYKQFLTNKI 779

Query: 1280 VDRQQVHRTISKEEMLHLFEFGDDENPD 1307
            +   Q  R    ++M  LF   +D   D
Sbjct: 780  LRDPQQRRVFKSKDMRDLFVLHEDAEGD 807


>gi|353234334|emb|CCA66360.1| probable RAD54-DNA-dependent ATPase of the Snf2p family
            [Piriformospora indica DSM 11827]
          Length = 819

 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 188/610 (30%), Positives = 294/610 (48%), Gaps = 98/610 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAHTMGLGKTFQVI 770
            V I   +S  L+ HQ+ G++F++        +  SG   +   GCI+A  MGLGKT Q I
Sbjct: 214  VVIDPVLSKILRPHQIEGVKFLY--------RCTSGMVVENQYGCIMADGMGLGKTLQTI 265

Query: 771  AFLYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
            + ++T ++ S + G  T    +I  P +++ NW  E  KW       +  F L+   R +
Sbjct: 266  SLIWTLLKQSPHAGKPTIEKCIISCPSSLVRNWANELDKWLGK--GTVGCFALD--GRGK 321

Query: 827  RAELLA---KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEA 882
            +AE++    +W A  G         RN++    +      R +   L +    +L+CDE 
Sbjct: 322  KAEVIEGVRRWVAARG---------RNVTLPVMICSYETLRTLAQELANCEIGLLICDEG 372

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN  + T Q L  +K QRR+ L+G+P+QN+L EY+ +++F    +LG+  EFR  F+
Sbjct: 373  HRLKNGDSQTFQILTSLKVQRRVILSGTPIQNDLSEYFSLLNFANPNYLGTQAEFRKNFE 432

Query: 943  NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 1002
            N I  G+  ++T         +   L   +  F+ R    ++ K LP K   V+  + S 
Sbjct: 433  NTIIRGRDADATDAVKDASEAKLKELGALVAPFIIRRTNELLSKYLPIKYEQVVFCRPSE 492

Query: 1003 LQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA--------LAQIWNHPGILQLTKDK 1054
            LQ  LY+ F          +++ +I KS   G  +        L ++ NHP +L L    
Sbjct: 493  LQLALYRLF----------ITSPEI-KSLLRGKGSQPLKAIGLLKKLCNHPELLDLP--- 538

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
                    E + S+E +     +G   RN+                       E     L
Sbjct: 539  -------GELAGSEELLPPGYGMGNSTRNLGG--------------------RERAPAML 571

Query: 1115 D--YSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
            D   SGK ++L  +L  + +   DK ++ S    TLDL+E    +L R         KG 
Sbjct: 572  DCQLSGKFIVLERMLHHIKTQTTDKIVLISNYTATLDLME----RLCR--------AKGY 619

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
             ++RLDG+   S+RQKLV+RFN+P        L+S++AG  GINL  ANR+I+ D  WNP
Sbjct: 620  GYFRLDGQMGISKRQKLVDRFNDPEGSEF-IFLLSSKAGGCGINLIGANRLILFDPDWNP 678

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTIS 1290
              D QA+ R WR GQ K  F YR +  G++EEKI++RQ  K+ L++ VVD ++   R  S
Sbjct: 679  AADQQALARVWRDGQKKECFVYRFVMTGSIEEKIFQRQAQKQALSSCVVDEKEDTERHFS 738

Query: 1291 KEEMLHLFEF 1300
             + +  LFEF
Sbjct: 739  LDMLRKLFEF 748


>gi|240278991|gb|EER42497.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H143]
 gi|325090250|gb|EGC43560.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H88]
          Length = 974

 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 174/588 (29%), Positives = 275/588 (46%), Gaps = 83/588 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            ++  L+ HQ  G++F++E ++  +R       G G ILA  MGLGKT Q IA ++T ++ 
Sbjct: 312  LAKHLREHQREGVKFLYECVM-GMRSFN----GEGAILADEMGLGKTLQTIALIWTLLKQ 366

Query: 780  VNLG-----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV-FMLEDVSRDRRAELLAK 833
              +      ++ ALIV PV ++ NW++EF KW  +E    RV   + D  R R  +    
Sbjct: 367  NPIYEAQPVVKKALIVCPVTLIDNWRKEFRKWLGNE----RVGVFVADAKRTRLTDF--T 420

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
                  V +IGY   R +             E+      G DI++ DE H ++  +  + 
Sbjct: 421  MGKSYSVMIIGYERLRTVQ-----------EELSKG--SGIDIVIADEGHRMRTVQNKSA 467

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            QA++ +   +RI L+G+P+QN+L E++ MVDFV  G LG+   F   F+ PI   +   +
Sbjct: 468  QAIQSLNTSKRIVLSGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGA 527

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
              +D++    RS  L      F+ R   +++ K LPPKT +V+    +  Q+ +Y   L 
Sbjct: 528  LEKDIEKGEARSEELTNLTSLFILRRTADILLKYLPPKTEYVLFCNPTSSQKNIYHYVLS 587

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
               F     ++E    S       L ++ N P +L+              +S    N   
Sbjct: 588  SPIFQCALGNSE----SALQLITILKKLCNSPSLLK------------PRNSDQTPNSTL 631

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSN 1132
              +I   P  +   L   +                        SGK+ +L  +L  +   
Sbjct: 632  GALISSLPPTVLRHLSPAS------------------------SGKIRVLDQLLHNIRHT 667

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
              +K ++ S    TLDL+  +L+ L  P            + RLDG T  S+RQ LV+ F
Sbjct: 668  TSEKVVLISNYTSTLDLLATFLTSLSLP------------FLRLDGSTPPSKRQGLVDDF 715

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N   +  V   L+S +AG  G+NL  A+R+I+ D  WNP  D+QA+ R  R GQ +    
Sbjct: 716  NRSSSSSVFAFLLSAKAGGTGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRHCRV 775

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            YRL+  G +EEKI++RQVTK GLA  V+D++      S+EE+  LF  
Sbjct: 776  YRLVLKGALEEKIWQRQVTKIGLADSVMDQKTGVSQFSREELRDLFRL 823


>gi|302509748|ref|XP_003016834.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371]
 gi|291180404|gb|EFE36189.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371]
          Length = 1220

 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 180/608 (29%), Positives = 281/608 (46%), Gaps = 103/608 (16%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            R+P  +   L  +Q  G++++WE   Q +          G I+   MGLGKT QVIAFL 
Sbjct: 381  RLPGDVYPYLFDYQKTGVKWLWELYQQQV----------GGIIGDEMGLGKTIQVIAFLA 430

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRDRR 827
                S  L     ++V P  V+  W  EF +W P    P RV +L        ++  + +
Sbjct: 431  GIHYSKKLK-GPIIVVCPPTVMKQWVNEFHRWWP----PFRVSILHTSGSGMVNIKSESQ 485

Query: 828  AE---LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL------- 877
            AE       W  +      G  A R +   + ++D ++       LQ    +L       
Sbjct: 486  AEDRYTSGVWGDRNSTTQRGNKAARRI-LKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGI 544

Query: 878  -VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
             V DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG+   
Sbjct: 545  AVLDEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVN 604

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFV 995
            FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  M+V   DLP K+  V
Sbjct: 605  FRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDVAA-DLPKKSEQV 663

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +  KL+ +QR  Y+ FL     + +  S  + R+    G   L +I NHP    LT+ K 
Sbjct: 664  LFCKLTKVQRAAYEAFL----ASGEMSSILRGRREALYGIDMLRKICNHP---DLTQHKI 716

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
              ++            DYN   G K                                   
Sbjct: 717  LSTK-----------TDYNYGSGAK----------------------------------- 730

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM ++  +L +  + G K+L+F+Q    LD++E ++               G ++ R
Sbjct: 731  -SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGF-----------DGFNYRR 778

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T    RQ +V+ FN   N  +   L++T+ G LG+NL  A+RVII D  WNP+ D+
Sbjct: 779  MDGNTPIKVRQSMVDEFNN--NPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDV 836

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T    ++ 
Sbjct: 837  QARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQMSDIQ 896

Query: 1296 HLFEFGDD 1303
             LF  G+D
Sbjct: 897  DLFTLGND 904


>gi|226289757|gb|EEH45241.1| DNA repair and recombination protein RAD26 [Paracoccidioides
            brasiliensis Pb18]
          Length = 1236

 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 187/642 (29%), Positives = 287/642 (44%), Gaps = 118/642 (18%)

Query: 697  AITGYIVNVVREKGEE----------------AVRIPSSISAKLKAHQVVGIRFMWENII 740
             +TG IV    E  EE                  R+P  I   L  +Q  G++++WE   
Sbjct: 380  GVTGEIVAPAEENDEEEWFLPHPKVPDTELNGGYRVPGDIYPYLFDYQKTGVQWLWELYQ 439

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWK 800
            Q +          G I+   MGLGKT QVIAFL     S  L  +  ++V P  V+  W 
Sbjct: 440  QKV----------GGIIGDEMGLGKTIQVIAFLAGLHYSKKL-TKPIIVVCPPTVMKQWV 488

Query: 801  QEFMKWRPSELKPLRVFMLEDVSR---DRRAELLAKWRAKGGVFLIGYT--AFRNLSFGK 855
             EF +W      P RV +L        + R+E  A  R +  ++       A +     K
Sbjct: 489  NEFHRW----WAPFRVSILHTSGSGMINLRSESYADARLESQIWDPDQPRRATKEQKAAK 544

Query: 856  HVKDRNMAR-----EICHALQDGPDILV--------CDEAHMIKNTRADTTQALKQVKCQ 902
             + DR +A+          LQ    +L+         DE H I+N     T   K+++  
Sbjct: 545  KILDRVLAKGHVLVTTYSGLQTYSSLLIPVDWGCSILDEGHKIRNPDTAITIHCKELRTA 604

Query: 903  RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMN 962
             R+ L+G+P+QNNL E + + DFV    LG+   FRN+F+ PI  G + N+++  V+   
Sbjct: 605  HRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAA 664

Query: 963  QRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDR 1021
            + +  L + +  ++ QR  ++V   DLP K+  V+  KL+ +QR  Y+ FL     +N+ 
Sbjct: 665  KCAETLKDAISPYLLQRFKIDVAA-DLPKKSEQVLFCKLTKIQRSAYQAFLG----SNEM 719

Query: 1022 VSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKP 1081
             S  + R+    G   L +I NHP                        ++  +  +  KP
Sbjct: 720  SSILRGRREALYGIDMLRKICNHP------------------------DLPEHKTLSTKP 755

Query: 1082 RNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFS 1141
                    G N                  Y     SGKM ++  +L +    G KSL+F+
Sbjct: 756  --------GYN------------------YGSAAKSGKMQVVKALLELWKETGHKSLLFA 789

Query: 1142 QSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVK 1201
            Q    LD++E ++  +            G  + R+DG T    RQ LV+ FN   N  + 
Sbjct: 790  QHRIMLDILERFIKSM-----------TGFKYQRMDGNTPIKLRQSLVDEFNN--NPEIH 836

Query: 1202 CTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTM 1261
              L++T+ G LG+NL  A+RVII D  WNP+ D+QA  RAWR GQ + V  YRLM  GT+
Sbjct: 837  IFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTI 896

Query: 1262 EEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            EEKIY RQ+ K+ L  +++   +  +T    ++  LF  G+D
Sbjct: 897  EEKIYHRQIFKQFLTNKILRDPKQRQTFQMSDLHDLFTLGND 938


>gi|154271055|ref|XP_001536381.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus
            NAm1]
 gi|150409604|gb|EDN05048.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus
            NAm1]
          Length = 1275

 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 178/612 (29%), Positives = 280/612 (45%), Gaps = 106/612 (17%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
              RIP  I   L  +Q  G++++WE   Q +          G I+   MGLGKT QVIAF
Sbjct: 417  GFRIPGDIYPYLFDYQKTGVQWLWELYQQKV----------GGIIGDEMGLGKTIQVIAF 466

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR---DRRAE 829
            L     S  L  ++ ++V P  V+  W  EF +W      P RV +L        + R+E
Sbjct: 467  LAGLHHSKKL-TKSVIVVCPPTVMKQWVNEFHRW----WAPFRVSILHSSGSGMVNLRSE 521

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI---------CHALQDGPDILV-- 878
              A  R +  ++       R L   +    R + R +            LQ    +L+  
Sbjct: 522  SFADARLESQLWEPDQP--RRLPKEQKAAKRILKRVLEEGHVLVTTYSGLQTYRSLLIPV 579

Query: 879  ------CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                   DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DF     LG
Sbjct: 580  DWGCAILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFAFPMRLG 639

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPK 991
            +   FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  ++V   DLP K
Sbjct: 640  TLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAA-DLPKK 698

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
            +  V+  KL+ LQR  Y+ FL     +N+  S  + R+    G   L +I NHP      
Sbjct: 699  SEQVLFCKLTKLQRSAYEAFLG----SNEMSSILRGRREALYGIDMLRKICNHP------ 748

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                              ++  + V+ +KP                           + Y
Sbjct: 749  ------------------DLPEHKVLSKKP--------------------------SYNY 764

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
                 SGKM ++  +L +  + G K+L+F+Q    LD++E ++  +            G 
Sbjct: 765  GSASKSGKMQVVKSLLELWRDTGHKTLLFTQHRIMLDILERFIISM-----------GGF 813

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
             + R+DG T    RQK+V+ FN   N  +   L++T+ G LG+NL  A+RVII D  WNP
Sbjct: 814  KYQRMDGNTPIKFRQKMVDEFNN--NPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNP 871

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            + D+QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T   
Sbjct: 872  STDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQM 931

Query: 1292 EEMLHLFEFGDD 1303
             ++  LF  G+D
Sbjct: 932  SDLHDLFTLGND 943


>gi|449666890|ref|XP_002155441.2| PREDICTED: DNA excision repair protein ERCC-6-like, partial [Hydra
            magnipapillata]
          Length = 1025

 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 183/606 (30%), Positives = 277/606 (45%), Gaps = 105/606 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   +P  +  KL  +Q VG+R++W+   Q +          G I+   MGLGKT QVI
Sbjct: 253  EDGFLLPRKLWNKLYKYQRVGVRWLWQLHAQEV----------GGIVGDEMGLGKTIQVI 302

Query: 771  AFLYTAMRSVN--------LGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV 822
            +FL   + S           GL + LIV P  V+  W  EF  W P      RV +L   
Sbjct: 303  SFLAGLVYSKKGNNINNNKFGLGSVLIVCPATVMFQWVSEFHMWWPH----FRVAILHSS 358

Query: 823  SR--DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 880
                     L+       G+ +  Y +  N     H K+           +     ++ D
Sbjct: 359  GTFIGSPLTLIRAISKHPGILITTYNSVLN-----HKKE---------LYKHNWQYVILD 404

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H I+N  A  T A KQ     R+ LTG+P+QN+L E + + DFV  G LG+   F   
Sbjct: 405  EGHKIRNPDALITLACKQFNTSHRLILTGTPMQNSLKELWSLFDFVYPGRLGTLPVFMAE 464

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNVVKK-DLPPKTVFVITV 998
            F  PI  G + N++S  V+   +   IL + +  + ++RM  +V +   LP K+  ++  
Sbjct: 465  FSIPITMGGYANASSLQVQAAYKCCCILKDTITPYMIRRMKKDVQQTLFLPTKSEQILFC 524

Query: 999  KLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD--KGY 1056
            KL+  Q+ +YK F+      +    + KI    F G   L +I NHP ++ L  +  KG 
Sbjct: 525  KLTEEQKAIYKEFISSRDVASILNGDMKI----FPGLIKLRKICNHPDLVSLAAEVEKGK 580

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
            P+  D  D+S                            GF+++                 
Sbjct: 581  PASLD--DASCY--------------------------GFWKR----------------- 595

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            SGKM+++ ++L M  + G + L+F+QS   LD++E +L                  + R+
Sbjct: 596  SGKMIVVENLLRMWKHQGHRVLLFTQSKQMLDILEGFLKAAEH------------SYMRM 643

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG T    R  +V++F+E  +K +   L++TR G LG+NL +ANRVII D  WNP+ D Q
Sbjct: 644  DGTTSVKSRHGIVKKFHE--SKNIFVFLLTTRVGGLGLNLIAANRVIIYDPDWNPSVDSQ 701

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            A  R+WR GQ K V  YRL+  GT+EEKIY RQ+ K+ L  RV+      R     ++  
Sbjct: 702  ARERSWRIGQLKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVLTNPYQRRFFKNNDLHE 761

Query: 1297 LFEFGD 1302
            LF  GD
Sbjct: 762  LFTLGD 767


>gi|388855888|emb|CCF50463.1| related to RAD54-DNA-dependent ATPase of the Snf2p family [Ustilago
            hordei]
          Length = 1070

 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 180/593 (30%), Positives = 284/593 (47%), Gaps = 81/593 (13%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR- 778
            ++  L+ HQV G++F++E ++       + DKG GCILA  MGLGKT Q IA + T  + 
Sbjct: 326  LAKALRPHQVQGVKFLYERVMG---MHANSDKGRGCILADQMGLGKTLQTIALILTLAKQ 382

Query: 779  -----SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK 833
                 S +  +  AL+V P+ ++ NWK+EF KW  +    L V  ++     +  E  A+
Sbjct: 383  NCYYTSRSATIHRALVVCPLTLVKNWKREFRKWIGNNA--LNVLSIDQDRGRKDVERFAR 440

Query: 834  WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
              +   V +IGY   R +             EI        D++VCDE H +KN  A  T
Sbjct: 441  -SSSYNVMVIGYEKLRTVI------------EIVKHANPPVDLIVCDEGHRLKNKEAQIT 487

Query: 894  QALKQVK-CQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
                 +  C RRI L+G+P+QN+L E + +V FV +  LG+  EFR  F+ PI   +  +
Sbjct: 488  TIFDDLSFCNRRIILSGTPIQNHLSELHALVSFVDDEALGTYDEFRRIFEEPIIRSRAPH 547

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
             + +       R+  L       + R   +++   LPPK   V+    S  Q R+Y+  L
Sbjct: 548  CSRQIQATGQARAAALKRLTNDVILRRTADILVDFLPPKKEMVLFCSPSQEQLRIYQSIL 607

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGY--QALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 1070
                      SN    +S   G     L QI    G+L+   +      +D E S     
Sbjct: 608  ---------ASNHV--RSILQGEPGNGLLQI----GVLRKLCNTPELLLKDCESS----- 647

Query: 1071 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TM 1129
                   G+ P      L G +   FF  ++  +        E  YSGK++ L+++L T+
Sbjct: 648  -------GQTPTKA---LLG-HLGSFFPPNFVRN--------EARYSGKLICLMNLLETV 688

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
             +   DK ++ S    TLD +E              + KK   + RLDG+T   ER  +V
Sbjct: 689  RAQTEDKVVLVSSFTSTLDTVE------------AMVRKKRYSYLRLDGKTPQDERMAMV 736

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
             +FN     +    L+S ++G +G+NL  ANR++++D  WNP+ DLQA+ R  R GQ K 
Sbjct: 737  NQFNRQAVDKSFVFLLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQNKV 796

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLFEF 1300
             + YRL+  GTM+EKIY+RQ++K GL+  ++D  ++    T S++E+  +F  
Sbjct: 797  CYIYRLLLSGTMDEKIYQRQISKLGLSDSLMDSEKKSASDTFSQQELKDIFTL 849


>gi|242778005|ref|XP_002479148.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus
            ATCC 10500]
 gi|218722767|gb|EED22185.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus
            ATCC 10500]
          Length = 1037

 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 175/594 (29%), Positives = 284/594 (47%), Gaps = 84/594 (14%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 779
            ++  L+ HQ  G++F++E ++  +R       G G ILA  MGLGKT Q I  L+T ++ 
Sbjct: 309  LTKHLREHQREGVKFLYECVM-GLRDYN----GEGAILADEMGLGKTLQTITLLWTLLKQ 363

Query: 780  VNLG-----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 834
              +      ++ ALIV PV +++NW++EF KW  +E   + VF+ +D    +R +L    
Sbjct: 364  NFIYEAAPVVKKALIVCPVTLINNWRKEFRKWLGNER--IGVFVFDD----KRKKLTDFT 417

Query: 835  RAKG-GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 893
              K   V +IGY   R +  G  +K              G DI++ DE H +K  +  + 
Sbjct: 418  MGKAYNVMIIGYEKLRTVQEG-LLKGH------------GIDIVIADEGHRLKTVQNKSG 464

Query: 894  QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 953
            QA++ +   +RI L+G+P+QN+L E++  VD V  G LG+   F   F+ PI   Q   +
Sbjct: 465  QAIQALNTAKRIILSGTPIQNDLSEFFAAVDLVNPGILGTYKNFMKEFEGPIVRSQQPEA 524

Query: 954  TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD 1013
            T  D++    R   L E    F+ R   +++ + LPPKT +VI    + +Q  +Y+  L 
Sbjct: 525  TIRDIEKGETRGEELRELTSMFILRRTADILSRYLPPKTEYVILCNPTSVQASIYRHVLG 584

Query: 1014 LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDY 1073
               F     + E      F+    L ++ N P +L         ++ D E  +S      
Sbjct: 585  SPIFQTALGNTE----GAFSLLTILKKLCNSPSLLN--------AKTDDEPQNSTVATLL 632

Query: 1074 NVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSN 1132
            + +     R  +                               SGK+ +L  +L  + ++
Sbjct: 633  STLSPSLRRQFSP----------------------------SSSGKIRVLDQLLHNLRTS 664

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
              +K ++ S    TL+L+   L+ L  P            + RLDG T SS+RQ LV+ F
Sbjct: 665  TSEKIVIVSNYTSTLNLLGVLLTSLSLP------------FLRLDGSTPSSKRQSLVDDF 712

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N          L+S +AG  G+NL  A+R+++ D  WNP  DLQA+ R  R GQ +  + 
Sbjct: 713  NRAPASTCFAFLLSAKAGGTGLNLTGASRLVLYDVDWNPATDLQAMARIHRDGQKRHCYI 772

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT-ISKEEMLHLFEFGDDEN 1305
            YR+M  G +EEKI++RQVTK GLA  V++ +  +    S+EE+  LF   +D++
Sbjct: 773  YRIMLKGALEEKIWQRQVTKIGLADSVMESKSSNMAQFSREELKDLFRLYEDKS 826


>gi|170087336|ref|XP_001874891.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82]
 gi|164650091|gb|EDR14332.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82]
          Length = 816

 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 187/607 (30%), Positives = 287/607 (47%), Gaps = 101/607 (16%)

Query: 720  ISAKLKAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAHTMGLGKTFQVIAFLYTA 776
            ++  L+ HQV G++F++        K  +G   +   GCI+A  MGLGKT Q IA L+T 
Sbjct: 220  LTKVLRPHQVEGVKFLY--------KCTTGMLVENQYGCIMADEMGLGKTLQCIALLWTL 271

Query: 777  MR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSE-LKPLRVFMLEDVSRDRRAELL 831
            ++ S + G   +   +I  P +++ NW  E +KW   + + PL +       +  +AELL
Sbjct: 272  LKQSPHPGKPSIEKCIIACPSSLVKNWANELVKWLGKDAVTPLAI-----DGKGGKAELL 326

Query: 832  ---AKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 882
                +W A  G      V ++ Y   R L+               H       +L+CDE 
Sbjct: 327  ERVGRWVAARGRNVTQPVMIVSYETLRTLT--------------VHLAHCKIGLLLCDEG 372

Query: 883  HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 942
            H +KN+ + T QAL  +   RR+ LTG+P+QN+L EY+ +++F    FLGS ++FR  F+
Sbjct: 373  HRLKNSESLTFQALNGLDVNRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFE 432

Query: 943  NPIENGQHTNSTSEDVKIMNQRS-HILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 1001
            N I  G+ + + S+ VK  +++    L   +  F+ R   +++ K LP K   V+   LS
Sbjct: 433  NAIIRGRDSLA-SDGVKAESEKKLKELGNLVTKFIIRRTNDLLSKYLPVKYEQVVFCGLS 491

Query: 1002 PLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPS 1058
              Q  LY+ F+   ++        S              L ++ NHP +L L  D     
Sbjct: 492  EFQLSLYRLFIVSPEIKALLRGTTSQP------LKAINILKKLCNHPELLDLPDDLKGCD 545

Query: 1059 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
                E  SS                     +GK      + DW                G
Sbjct: 546  HLIPEGFSSTAARS----------------RGKGGKQTVRCDW---------------GG 574

Query: 1119 KMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1177
            K ++L   L  + +   DK ++ S    TLDL E    KL R  K G        ++RLD
Sbjct: 575  KFLVLERFLHQIKTQTTDKIVLISNYTQTLDLFE----KLCRSKKYG--------FFRLD 622

Query: 1178 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1237
            G     +RQKLV++FN+P  K     L+S++AG  GINL  ANR+I+ D  WNP  D QA
Sbjct: 623  GSMTIVKRQKLVDQFNDPDGKEF-IFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQA 681

Query: 1238 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRTISKEEMLH 1296
            + R WR GQ K  F YR ++ GT+EEKI++RQ  K+ L++ VVD ++   R  S + +  
Sbjct: 682  LARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQALSSAVVDEKEDAERHFSIDALRQ 741

Query: 1297 LFEFGDD 1303
            LF F ++
Sbjct: 742  LFTFNEN 748


>gi|301114327|ref|XP_002998933.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4]
 gi|262111027|gb|EEY69079.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4]
          Length = 1052

 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 186/592 (31%), Positives = 278/592 (46%), Gaps = 90/592 (15%)

Query: 750  DKGLGCILAHTMGLGKTFQVIAFL---YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW 806
            ++G+G IL   MGLGKT Q+ +FL   + A R     LRT L++ P +VL  W +E  KW
Sbjct: 242  ERGVGGILGDDMGLGKTVQLASFLGSLHAARR-----LRTVLLLCPASVLLQWVRELHKW 296

Query: 807  RPSELKPLRVFML--------------------EDVSRDRRAE--------LLAKWRAKG 838
             P     +RV +L                    EDV R    E        L       G
Sbjct: 297  APW----MRVVLLHASGTGVSASSSSECYEQLIEDVFRFDDDEEEDVGDPGLRQDSPTGG 352

Query: 839  GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQ 898
            GV +  Y   R        +   + RE         D +V DE H I+N  A+TT   KQ
Sbjct: 353  GVVISTYENVR------QYQSLFLTREW--------DYVVLDEGHRIRNPDAETTLVCKQ 398

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            ++   RI L+G+P+QN L E + + DFV  G LG+   F + F  PI  G +  +T   V
Sbjct: 399  LRTVHRIILSGTPIQNRLRELWSLFDFVYPGRLGTLPTFDDEFVLPIRAGGYATATKMQV 458

Query: 959  KIMNQRSHILYEQLKGFV-QRMDMNVVKKD-----LPPKTVFVITVKLSPLQRRLYKRFL 1012
             +  + +  L + ++ F+ +R    V+  D     LP K   ++  +L+  QR LYKRFL
Sbjct: 459  LMAYKCALALKDLIQPFLLRRTKQEVMATDANSSMLPGKQEQILFCRLTQRQRALYKRFL 518

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
                  +  V    +R   F     L  I NHP +L    D G     D +  S  +  +
Sbjct: 519  ASPEVAS--VLRRDLRP--FRAISVLRHICNHPDLLATFGDGGL---ADKKRQSYFKEEE 571

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 1132
                  E   N+   L    ++G            +  +     SGKM++L  +LT+   
Sbjct: 572  EEEEGEEGFTNVAGLLDEDKEEG----------ESDEPFGAASASGKMIVLQKVLTLWKE 621

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
               + LVF+Q+   LD++E ++S+L            G    RLDG T  +ERQ+ ++ F
Sbjct: 622  QKHRVLVFTQTRSMLDILESFMSRL------------GHACTRLDGTTGVAERQQRLDAF 669

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N P +  +   L++TRAG +G+NL  A+RV++ D  WNP+ D+QA  RAWR GQ KPV  
Sbjct: 670  NAP-DSNLFAFLLTTRAGGIGVNLVGADRVVVFDPDWNPSTDVQARERAWRIGQQKPVTV 728

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            YRL+  GT+EEKIY RQ+ K+ L ++V+   +  R  +K  +  LF   D++
Sbjct: 729  YRLVTAGTIEEKIYHRQIFKQYLTSKVLHDAKRKRCFNKHSLRDLFVLADEK 780


>gi|393232942|gb|EJD40518.1| SNF2 family domain-containing protein [Auricularia delicata TFB-10046
            SS5]
          Length = 821

 Score =  241 bits (615), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 191/615 (31%), Positives = 296/615 (48%), Gaps = 101/615 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG---DKGLGCILAHTMGLGKTFQVI 770
            V I   +SA L+ HQV G++F++        K  SG   +   GCI+A  MGLGKT Q I
Sbjct: 213  VVIDPVLSAILRPHQVEGVKFLY--------KCTSGMMVENQYGCIMADAMGLGKTLQCI 264

Query: 771  AFLYTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
              L+T ++ S + G  T    +I  P +++ NW  EF KW      P     L    +  
Sbjct: 265  TLLWTLLKQSPHAGKPTIEKCIIACPSSLVKNWANEFTKWLGEGTVP----CLAVDGKGT 320

Query: 827  RAELLA---KWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL 877
            +A+L+A   +W A  G      V ++ Y   R+L  G  + +  +             +L
Sbjct: 321  KADLIANVQRWVAASGRNVTLPVMIVSYETLRSL--GAWLANATIG------------LL 366

Query: 878  VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEF 937
            +CDE H +KN+ + T +AL  +  +RR+ L+G+P+QN+L EY+ +++F    FLGS  +F
Sbjct: 367  LCDEGHRLKNSDSLTFKALNSLNVKRRVILSGTPIQNDLSEYFSLLNFANPDFLGSKADF 426

Query: 938  RNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 997
            +  F+N I  G+  ++T  + +    +   L   +  F+ R   +++ K LP K   V+ 
Sbjct: 427  KKNFENAIIRGRDADATDGEKEKSEAKLKELGALVSRFIIRRANDLLSKYLPVKYEQVVF 486

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF-------FAGYQALAQIWNHPGILQL 1050
             + SP Q  LYK F          +S+ +I+K               L ++ NHP +L L
Sbjct: 487  CQPSPFQVALYKLF----------ISSPEIKKLLRGVGSQPLKAINILKKLCNHPELLDL 536

Query: 1051 TKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHT 1110
             KD             SDE +    V      +   F  G+ +    + DW         
Sbjct: 537  PKDL----------HGSDELIPEGFVGAGG--DAGGFGGGRRERRELRCDW--------- 575

Query: 1111 YKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKK 1169
                   GK  +L   L  + +   DK ++ S    TL+L E    +L R         K
Sbjct: 576  ------GGKFAVLERFLHRIRTETNDKIVLISNYTQTLELFE----RLCR--------DK 617

Query: 1170 GKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSW 1229
            G  ++RLDG     +RQKLV++FN P  K     L+S++AG  GINL  ANR+I+ D  W
Sbjct: 618  GYGFFRLDGSMSVIKRQKLVDQFNNPEGKEF-IFLLSSKAGGCGINLIGANRLILFDPDW 676

Query: 1230 NPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHRT 1288
            NP  D QA+ R WR GQTK  F YR ++ GT+EEKI++RQ +K+ L++ VVD ++   R 
Sbjct: 677  NPAADQQALARVWRDGQTKECFVYRFISSGTIEEKIFQRQASKQALSSCVVDEKEDAERH 736

Query: 1289 ISKEEMLHLFEFGDD 1303
             S + +  LF F ++
Sbjct: 737  FSLDALRQLFMFQEN 751


>gi|407919440|gb|EKG12686.1| SNF2-related protein [Macrophomina phaseolina MS6]
          Length = 931

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 178/606 (29%), Positives = 283/606 (46%), Gaps = 84/606 (13%)

Query: 703  VNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 762
            +NV + K    V +   +S  L+ HQ  G++F++E ++           G G ILA  MG
Sbjct: 257  MNVPKGKQIVDVVVDPVLSKHLRDHQRQGVQFLYECVMG-----MGAYNGQGVILADEMG 311

Query: 763  LGKTFQVIAFLYTAMRSVNLG-----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF 817
            LGKT Q I  ++T ++   +      ++ A+IV P  V+ NW++EF KW  +E   L VF
Sbjct: 312  LGKTLQTITLVWTLLKQNPIYDDPPVVKKAIIVCPAGVVSNWRREFRKWLGNER--LGVF 369

Query: 818  MLEDVSRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDI 876
             + D SR R  +     R K   V +IGY         K +K     +  C       D+
Sbjct: 370  -VADESRKRLTDFT---RGKCYSVMIIGYE--------KLLKSHEDIKSQCDV-----DL 412

Query: 877  LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
            +V DE H +K  +  T QA++ +   R + L+G+P  NNL+E++ + D V  G LG  + 
Sbjct: 413  VVLDEGHKLKTAKGKTAQAIRNLGTDRVVLLSGTPFSNNLLEFHAVADLVNPGVLGKLNA 472

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 996
            F+  F+ PI  GQ  ++T  + +    R   L +  K F+ R   +++ K LP KT  V+
Sbjct: 473  FKREFEGPIVKGQQPDATCSEREKGAARHEELDKLSKQFMLRRTADILSKYLPSKTEHVL 532

Query: 997  TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 1056
              + +  Q  +Y+R L    F     SN+   +        L Q+ N P +L   K++  
Sbjct: 533  LCRPTTAQAEVYRRVLASPAFGAALGSNDNALQLI----NVLKQVCNSPKLLSYAKNENT 588

Query: 1057 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 1116
            PS                  I     N+   L        FQ    + LLH         
Sbjct: 589  PSP----------------TIAAILENIPAKLLNSGASAKFQ--VLDSLLHR-------- 622

Query: 1117 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
                        + +   +K ++ S    TLD++   L+ L               + R+
Sbjct: 623  ------------IHTTTNEKVVIVSHYTSTLDILGGLLTSL------------SYTFLRV 658

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG T +++RQ+++ +FN     +    L+S +AG +GINL  A+R+++ D  WNP +DLQ
Sbjct: 659  DGSTPANKRQEMINKFNNSDANKHFAFLLSAKAGGVGINLTGASRLVLYDIDWNPAHDLQ 718

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLH 1296
            A+ R  R GQ +P   YRL+  G ++EKIY+RQVTK+GLA  V+D +    + +KEE+  
Sbjct: 719  AMARIHRDGQKRPCKIYRLLTMGALDEKIYQRQVTKQGLADSVIDSKTSSSSFTKEELQD 778

Query: 1297 LFEFGD 1302
            LF   D
Sbjct: 779  LFTLND 784


>gi|225682364|gb|EEH20648.1| DNA repair and recombination protein RAD26 [Paracoccidioides
            brasiliensis Pb03]
          Length = 1236

 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 187/641 (29%), Positives = 287/641 (44%), Gaps = 118/641 (18%)

Query: 698  ITGYIVNVVREKGEE----------------AVRIPSSISAKLKAHQVVGIRFMWENIIQ 741
            +TG IV    E  EE                  R+P  I   L  +Q  G++++WE   Q
Sbjct: 381  VTGEIVAPAEENDEEEWFLPHPKVPDTELNGGYRVPGDIYPYLFDYQKTGVQWLWELYQQ 440

Query: 742  SIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQ 801
             +          G I+   MGLGKT QVIAFL     S  L  +  ++V P  V+  W  
Sbjct: 441  KV----------GGIIGDEMGLGKTIQVIAFLAGLHYSKKL-TKPIIVVCPPTVMKQWVN 489

Query: 802  EFMKWRPSELKPLRVFMLEDVSR---DRRAELLAKWRAKGGVFLIGYT--AFRNLSFGKH 856
            EF +W      P RV +L        + R+E  A  R +  ++       A +     K 
Sbjct: 490  EFHRW----WAPFRVSILHTSGSGMINLRSESYADARLESQIWDPDQPRRATKEQKAAKK 545

Query: 857  VKDRNMAR-----EICHALQDGPDILV--------CDEAHMIKNTRADTTQALKQVKCQR 903
            + DR +A+          LQ    +L+         DE H I+N     T   K+++   
Sbjct: 546  ILDRVLAKGHVLVTTYSGLQTYSSLLIPVDWGCSILDEGHKIRNPDTAITIHCKELRTAH 605

Query: 904  RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ 963
            R+ L+G+P+QNNL E + + DFV    LG+   FRN+F+ PI  G + N+++  V+   +
Sbjct: 606  RLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAK 665

Query: 964  RSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRV 1022
             +  L + +  ++ QR  ++V   DLP K+  V+  KL+ +QR  Y+ FL     +N+  
Sbjct: 666  CAETLKDAISPYLLQRFKIDVAA-DLPKKSEQVLFCKLTKIQRSAYQAFLG----SNEMS 720

Query: 1023 SNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPR 1082
            S  + R+    G   L +I NHP                        ++  +  +  KP 
Sbjct: 721  SILRGRREALYGIDMLRKICNHP------------------------DLPEHKTLSTKP- 755

Query: 1083 NMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQ 1142
                   G N                  Y     SGKM ++  +L +    G KSL+F+Q
Sbjct: 756  -------GYN------------------YGSAAKSGKMQVVKALLELWKETGHKSLLFAQ 790

Query: 1143 SIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKC 1202
                LD++E ++  +            G  + R+DG T    RQ LV+ FN   N  +  
Sbjct: 791  HRIMLDILERFIKSM-----------TGFKYQRMDGNTPIKLRQSLVDEFNN--NPEIHI 837

Query: 1203 TLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTME 1262
             L++T+ G LG+NL  A+RVII D  WNP+ D+QA  RAWR GQ + V  YRLM  GT+E
Sbjct: 838  FLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIE 897

Query: 1263 EKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            EKIY RQ+ K+ L  +++   +  +T    ++  LF  G+D
Sbjct: 898  EKIYHRQIFKQFLTNKILRDPKQRQTFQMSDLHDLFTLGND 938


>gi|326434134|gb|EGD79704.1| hypothetical protein PTSG_10689 [Salpingoeca sp. ATCC 50818]
          Length = 1641

 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 189/607 (31%), Positives = 276/607 (45%), Gaps = 112/607 (18%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
            A+ +P  + +KL  +Q   +R  W   +Q+         G+G +L   MGLGKT QVIAF
Sbjct: 670  AIYVPGFLWSKLYPYQHECVR--WLASLQT--------SGVGGVLGDEMGLGKTIQVIAF 719

Query: 773  LY-----TAMRSVNLGLRTA-----LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV 822
            L      T   SV   +R +     L+V P  V+H+W +EF +W      P RV +L   
Sbjct: 720  LAGLMYGTPTTSVRRHVRRSSNGAILVVCPATVVHHWVREFHRW----WAPFRVCVLHSS 775

Query: 823  SRDRRAELLAKWRAKGG---VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
                  E L +  A+GG   V +  Y+  R       V+ R       H         V 
Sbjct: 776  GNYEGRESLVRRIARGGAGHVLITTYSTLRTAHTDILVRHR------WH-------YAVL 822

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H I+N  A  T   KQ+K + R+ LTG+P+QNNL E + + DFV  G LG    F N
Sbjct: 823  DEGHKIRNPDAQVTIIAKQLKTEHRLLLTGTPIQNNLKELWSLFDFVHPGRLGQLPTFTN 882

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG-FVQRMDMNV-VKKDLPPKTVFVIT 997
             F  P+  G + N+T + V    + + +L + ++   + R   +V  +  LPP+   ++ 
Sbjct: 883  EFITPMMVGSYANATEKQVHAAYRCACVLRDTIRPCMLHRSKADVQAQISLPPRNEQILF 942

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSF--FAGYQALAQIWNHPGILQLTKDKG 1055
             KL+  QR LY+ FL        R   E +R     F G   L +I NHP +        
Sbjct: 943  CKLTDDQRALYEHFL------ASRDVGEILRGELTAFHGIDLLRKICNHPDLA------- 989

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
             PS  D  D S     D +V +                       W             +
Sbjct: 990  -PSLADPPDYS-----DPSVPL----------------------PW-------------E 1008

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM++L  +L +      + L+F Q+   L+++E ++              +   + R
Sbjct: 1009 RSGKMIVLRQLLRIWFQKQHRVLLFCQTRQMLNMLESFIK------------YEHYTYLR 1056

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            LDG     +RQ L+  FN+  N  V   +++TR G LG+NL  A+RVII D  WNP+ D+
Sbjct: 1057 LDGTVSVKQRQPLIRYFND--NPEVFIFILTTRTGGLGLNLTGADRVIIFDPDWNPSVDV 1114

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ KPV  YRL+  GT+EEKIY RQV K+ L  +V+   +  R     ++ 
Sbjct: 1115 QAKERAWRIGQQKPVTIYRLLTAGTIEEKIYHRQVFKQLLTFKVMKDPKQRRFFKSSDLH 1174

Query: 1296 HLFEFGD 1302
             LF  GD
Sbjct: 1175 ELFVLGD 1181


>gi|383848072|ref|XP_003699676.1| PREDICTED: DNA repair and recombination protein RAD54 [Megachile
            rotundata]
          Length = 760

 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 176/600 (29%), Positives = 289/600 (48%), Gaps = 94/600 (15%)

Query: 724  LKAHQVVGIRFMWENII-QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS--- 779
            L+ HQ  G++FM+E +  Q I      +   GCI+A  MGLGKT Q I  ++T ++    
Sbjct: 172  LRPHQREGVKFMYECVTGQRI------EGAYGCIMADEMGLGKTLQCITLMWTLLKQGPE 225

Query: 780  VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW---RA 836
                +  A+IV P +++ NW  E  KW  + ++PL +        D +     K    R 
Sbjct: 226  AKPLIEKAIIVAPSSLVKNWYNEIFKWLKNRVQPLAIDGGNKADIDAKLTGFMKTYGRRC 285

Query: 837  KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQAL 896
               + +I Y  FR            +   + H  QD   +++CDE H +KN+   T QAL
Sbjct: 286  ANPILIISYETFR------------LHAHVLH--QDEVGLVLCDEGHRLKNSENQTYQAL 331

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
              +K +RR+ L+G+P+QN+L+EY+ +V FV +G LG++ EFR +F+ PI  GQ   +T  
Sbjct: 332  MNLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPILRGQDAAATDT 391

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
            + K+  +R   L   +   + R    ++ K LP K   V+ +K+  LQ  LYK F+    
Sbjct: 392  ERKLAQERLSELVTLVNKCLIRRTSALLSKYLPLKHELVVCIKMGKLQTDLYKNFIQSDS 451

Query: 1017 FTNDRVSNEKIRK-----SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
                   N    K     S  +    L ++ NHP ++                       
Sbjct: 452  IKKSMEENSDGSKKGKSLSALSAITLLKKLCNHPDLV----------------------- 488

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--DYSGKMVLLLDIL-T 1128
             Y  ++             +  DGF  ++    +   ++ KE+  + SGK+++L  +L +
Sbjct: 489  -YEKIL-------------QQSDGF--ENAAKLMPPNYSTKEILPELSGKLMVLDCLLAS 532

Query: 1129 MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
            + +   DK ++ S    TLDL E    KL          K+  ++ RLDG     +R K+
Sbjct: 533  IKTTTKDKIVLVSNYTQTLDLFE----KL--------CHKRSYNYVRLDGTMTIKKRSKV 580

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            V++FN+  N      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K
Sbjct: 581  VDKFNDE-NSNDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 639

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGDDENPD 1307
            P F       GT+EEKI++RQ  K+ L++ VVD+++ V R  +  ++  LF+  ++   D
Sbjct: 640  PCFT------GTIEEKIFQRQAHKKALSSTVVDQEEDVARHFTLNDLRDLFKLEENTISD 693


>gi|256075325|ref|XP_002573970.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
          Length = 1323

 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 199/690 (28%), Positives = 309/690 (44%), Gaps = 134/690 (19%)

Query: 658  RQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIP 717
            RQ R + L+ QF+ + ++ +S   DG L  G  +                         P
Sbjct: 166  RQRRTELLEEQFAREHEVHSSNPSDGKLDGGFCV-------------------------P 200

Query: 718  SSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL---- 773
             SI ++L  +Q  G++++W+             KG G I+   MGLGKT Q+IA L    
Sbjct: 201  GSIWSRLFDYQRKGVKWLWD----------LHQKGCGGIIGDEMGLGKTIQIIALLAGLH 250

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR-----DRRA 828
            Y+ +   +  L   LIV P  VL+ W  EF  W P    P+RV +L          ++  
Sbjct: 251  YSNIEDRSYRLGPTLIVCPATVLNQWMSEFHSWWP----PIRVAILHSTGSGYGKPNKLI 306

Query: 829  ELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
            +++      G V L  Y+    +++   +  RN +             ++ DE H IKN 
Sbjct: 307  QMITN--NPGSVLLTTYSTL--VTYRDMLTSRNWS------------YVILDEGHKIKNP 350

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
             A+ T A+K      R+ L+GSP+QNNL E + + DFV  G LG   EF  +F  PI  G
Sbjct: 351  EAEATLAVKHFSTPHRLILSGSPIQNNLRELWSLFDFVCPGRLGPLPEFMQQFSIPITQG 410

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
             +  ++   V+   Q +  L   LK ++ R     V+  LP K+  V+  +L+  Q++LY
Sbjct: 411  GYAAASPLQVETAYQCACTLRNLLKPYLIRRLKADVQIQLPAKSEQVLFCRLTDYQQKLY 470

Query: 1009 KRFLDLHGFTNDRVSNEKI--RKSFFAGYQALAQIWNHPGILQ-LTKDKGYPSREDAEDS 1065
            + +L+       +V  + +  + + F     L  + NHP +     +D  + + E   D 
Sbjct: 471  REYLE------SQVCKDLLNGKGNIFPSLILLRNLCNHPDLATGGPRDSCFLNEEFESDK 524

Query: 1066 SSDEN--MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
               EN  + Y+      PR                                  S KM+++
Sbjct: 525  QGIENVCLSYSWSRFGCPRR---------------------------------SSKMLVV 551

Query: 1124 LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
              +L    + G K L+FSQS   L L+E          +  +L K    + R+DG T  S
Sbjct: 552  ASLLKNWYDQGHKVLLFSQSRRMLTLLE----------RLVQLMKFS--YLRMDGTTPVS 599

Query: 1184 ERQKLVERFN-------EPLNKR-----VKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
            +R +L+ RFN       E +++      +   L++TR G LG+NL SANRV+I D  WNP
Sbjct: 600  QRHELIRRFNYRSTSDSEKIDRTSDHLDIFLFLLTTRVGGLGVNLTSANRVLIYDPDWNP 659

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            T DLQA  RAWR GQ++ V  YRL+  GT+EEKIY RQ+ K+ L  R++   +  R    
Sbjct: 660  TTDLQARERAWRIGQSRDVVIYRLLTSGTIEEKIYHRQIFKQFLTNRILKNPRQQRFFKT 719

Query: 1292 EEMLHLFEFGDDENPD-PLTAVS-KENGQG 1319
             ++  L  F D+ +   P TA+  K  G G
Sbjct: 720  NDLQELLTFEDESDIQIPETALYLKSEGMG 749


>gi|149235383|ref|XP_001523570.1| DNA repair and recombination protein RAD26 [Lodderomyces elongisporus
            NRRL YB-4239]
 gi|146452979|gb|EDK47235.1| DNA repair and recombination protein RAD26 [Lodderomyces elongisporus
            NRRL YB-4239]
          Length = 1159

 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 192/657 (29%), Positives = 294/657 (44%), Gaps = 125/657 (19%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            +  ++P  I   L  +Q   ++++WE  +Q            G I+   MGLGKT Q+I+
Sbjct: 317  DTFKLPGDIYPSLFDYQKTCVQWLWELYLQKT----------GGIIGDEMGLGKTIQIIS 366

Query: 772  FLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV----SRDRR 827
            F+   +    L  +  L+V P  VL+ W  EF +W P    PLR  +L  +    S+D++
Sbjct: 367  FI-AGLHYSGLLEKPVLVVVPATVLNQWVNEFHRWWP----PLRCVILHSIGSGMSKDKK 421

Query: 828  A------ELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC-- 879
                   E +  W  K        T+  +L   K +K +  AREI   +Q+   +LV   
Sbjct: 422  ISEEKLEEFMEDWDPK--------TSKSSL---KGIKSQINAREILDKVQEKGHVLVTTY 470

Query: 880  --------------------DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 919
                                DE H I+N  +D +   KQ+K   R+ L+G+P+QNNL E 
Sbjct: 471  VGLRMYSKYILPRQWGYCILDEGHKIRNPDSDISLTCKQIKTVNRVILSGTPIQNNLTEL 530

Query: 920  YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 979
            + + DFV  G LG+   F  +F  PI+ G + NS +  VK   + + +L + +  ++ R 
Sbjct: 531  WSLFDFVFPGRLGTLPVFEQQFSVPIKIGGYANSNNLQVKTAYKCAVVLRDLISPYLLRR 590

Query: 980  DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALA 1039
                V +DLP K   V+ V+L+  Q+ LY++FLD    + +  S  K +++   G   L 
Sbjct: 591  LKKDVAQDLPKKNEMVLFVRLTKEQQELYEKFLD----SEEMDSIVKGKRNVLVGVDTLR 646

Query: 1040 QIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK 1099
            +I NHP    L   +    R +  D S    M            + + LQ       +Q 
Sbjct: 647  KICNHP---DLIYREALMHRANYGDPSKSGKMQV----------LKNLLQ------LWQS 687

Query: 1100 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1159
            +    LL   T + LD   K V  L +L      GD+S  F                   
Sbjct: 688  EDHKTLLFCQTRQMLDILEKFVANLHLL------GDESKKF------------------- 722

Query: 1160 PGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSA 1219
                        ++ R+DG T  S RQ+LV+ FN   +  V   L++T+ G LG+NL  A
Sbjct: 723  ------------NYLRMDGNTPISRRQQLVDTFNNSPDLHV--FLLTTKVGGLGVNLTGA 768

Query: 1220 NRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARV 1279
            +RVII D  WNP+ D+QA  RAWR GQ K +  YRLM  G++EEKIY RQ+ K  L  ++
Sbjct: 769  DRVIIYDPDWNPSTDIQARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLQNKI 828

Query: 1280 VDRQQVHRTISKEEMLHLFEFGDD-----ENPDPLTAVSKENGQGSSQNTNCALKHK 1331
            +   +  R     ++  LF  GD      E  D   A ++E   GS    + +L  K
Sbjct: 829  LKDPKQRRLFKNSDLHDLFSLGDQTEQGTETGDMFNAATEEKYGGSKIRKSTSLMKK 885


>gi|378733564|gb|EHY60023.1| DNA excision repair protein ERCC-6 [Exophiala dermatitidis
            NIH/UT8656]
          Length = 1204

 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 189/643 (29%), Positives = 286/643 (44%), Gaps = 147/643 (22%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            +IP  I   L  +Q  G+++++E   Q +          G I+A  MGLGKT Q+IAFL 
Sbjct: 384  KIPGDIYPSLFGYQKTGVQWLYELYTQQV----------GGIIADEMGLGKTVQIIAFLA 433

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------------- 820
                S  L  +  ++V P  V+  W  EF +W P    P RV +L               
Sbjct: 434  GLHYSKKL-RKPIIVVCPATVMKQWVNEFHRWWP----PFRVTILHSSGSGMINIRNEAS 488

Query: 821  ------DVSRD---RRAELLAKWRA----------KGGVFLIGYTAFRNLSFGKHVKDRN 861
                  D++ D   R   L +  +A          +GGV +  YT  +            
Sbjct: 489  KEDKLLDLAFDPTVRNKPLTSTQKAAQKMIRPILEEGGVLVTTYTGLQ------------ 536

Query: 862  MAREICHALQDGP---DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLME 918
                  +A    P   D  + DE H I+N     T   K+++   RI L+G+P+QNNL+E
Sbjct: 537  -----TYAPLLIPVEWDYAILDEGHKIRNPNTAITIYCKELRTPNRIILSGTPMQNNLIE 591

Query: 919  YYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-Q 977
             + + DFV    LG+   FRN+F+ PI  G + N+++  V+   + +  L E +  ++ Q
Sbjct: 592  LWSLFDFVFPMRLGTLVNFRNQFEIPIRQGGYANASNLQVQTAFKCAETLKEAISPYLLQ 651

Query: 978  RMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD---LHGFTNDRVSNEKIRKSFFAG 1034
            R  ++V   DLP K+  V+   L+PLQR  Y+RFLD   +    N R      R+  + G
Sbjct: 652  RFKVDVAS-DLPKKSEKVVFCNLTPLQRAEYQRFLDSKEMEAIINGR------RQPLY-G 703

Query: 1035 YQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDD 1094
               L +I NHP +                      N  Y                     
Sbjct: 704  IDILRKICNHPDL---------------------ANHKY--------------------- 721

Query: 1095 GFFQKDWWNDLLHEHTYKELD--YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEF 1152
                      L H+  YK  D   SGKM ++  +L      G K+L+F+Q    LD++E 
Sbjct: 722  ----------LAHKPGYKYGDPAKSGKMTVVGALLKSWKGEGHKTLLFAQHRIMLDILEK 771

Query: 1153 YLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1212
            ++  L            G  + R+DG T    RQ +V+ FN   +  +   L++T+ G L
Sbjct: 772  FVKSL-----------DGFKYRRMDGNTPIPLRQSMVDEFN--TDPDLHVFLLTTKVGGL 818

Query: 1213 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTK 1272
            GINL  A+RVII D  WNP+ DLQA  RAWR GQ + V   RLM  GT+EEKIY RQ+ K
Sbjct: 819  GINLTGADRVIIYDPDWNPSTDLQARERAWRLGQKREVTICRLMIAGTIEEKIYHRQIFK 878

Query: 1273 EGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKE 1315
            + L  +++   +  +T    ++  LF  G++  P   +++ KE
Sbjct: 879  QFLTNKILKDPKQRQTFHLNDLHDLFSLGNEGAPTETSSLFKE 921


>gi|390338769|ref|XP_785657.3| PREDICTED: DNA repair and recombination protein RAD54B-like
            [Strongylocentrotus purpuratus]
          Length = 761

 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 188/606 (31%), Positives = 289/606 (47%), Gaps = 80/606 (13%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   + +KL+ HQ  G+ F++E I+  +R+ +    G G ILA  MGLGKT Q I  +
Sbjct: 118  VVVDPHLVSKLRPHQQKGVIFLYECIM-GLRQYE----GCGAILADEMGLGKTLQCITLV 172

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T  +    G    ++  LIVTP +++ NW +EF KW  SE   + VF    VS D++ E
Sbjct: 173  WTLFKQGPYGGKPIIKRVLIVTPGSLVKNWCREFRKWLGSER--ISVF---PVSSDKKVE 227

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
               K      V +I Y           V+  +  R I        D++VCDE H +KN+ 
Sbjct: 228  EFKK-SPLFPVMVISYEMM--------VRYADDIRGITF------DLVVCDEGHRLKNST 272

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              T   L  +  +RRI LTG+P+QN+L E+Y +V+F   G LG+S  F   ++ PI    
Sbjct: 273  IKTASLLSSLAVRRRILLTGTPIQNDLQEFYSIVEFCNPGVLGTSGSFHRVYEEPILRSN 332

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
              ++T E+  +   R+  L      FV R    +  K LPPK   V+  K S LQ RLY+
Sbjct: 333  QPSATKEEKTLGAARATELSRLTSLFVLRRTQEINNKYLPPKVETVVFCKPSALQLRLYQ 392

Query: 1010 RFLD----LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDS 1065
              L         +    S+            AL ++ N P +L       Y +   A++ 
Sbjct: 393  HLLRSPLIRSCLSRGYASSASAGSPHLVCIGALKKLCNDPSLL-------YQASRKADEE 445

Query: 1066 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL--HEHTYKE----LDYSGK 1119
                          K R    +L   +D+   ++  +  LL  +   Y E    L + GK
Sbjct: 446  G-------------KRRGGESWLLDHDDE---EESLYKGLLPIYPPDYSEGRPLLAHCGK 489

Query: 1120 MVLLLDILTMC---SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            + +L ++L          ++ ++ S    TLD+++   S             +G  + RL
Sbjct: 490  LCVLSEMLRAMHADPTRRERLVLVSNYTQTLDILQALCSI------------EGYQFCRL 537

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG T +++RQ +VE FN    K     L+S++AG +G+NL  A+R+++ D  WNP  DLQ
Sbjct: 538  DGSTPTAKRQSIVEHFNSSYAKET-IFLLSSKAGGVGLNLIGASRLLLYDIDWNPANDLQ 596

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR--QQVHRTISKEEM 1294
            A+ R WR GQ K V  YRL+  GT+EEKIY+RQ++K+ L+  VVD   Q      S E++
Sbjct: 597  AMARVWRDGQKKTVHIYRLITAGTIEEKIYQRQISKQSLSGAVVDAKGQSGSVKFSLEDL 656

Query: 1295 LHLFEF 1300
              LF  
Sbjct: 657  RDLFTL 662


>gi|392512974|emb|CAD27013.2| RAD26-LIKE DNA REPAIR AND RECOMBINATION PROTEIN [Encephalitozoon
            cuniculi GB-M1]
          Length = 687

 Score =  240 bits (613), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 180/593 (30%), Positives = 283/593 (47%), Gaps = 101/593 (17%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            E   +P  + + L  +Q  G+R+M    ++  R  K G      +LA  MGLGKT QVI 
Sbjct: 131  EGFSVPGFLWSSLFPYQQDGVRWM----LRLYRDEKGG------VLADDMGLGKTIQVIV 180

Query: 772  FLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELL 831
            FL   + S  +    ALI+ P  ++  W  E+ ++ P  ++    F  ED          
Sbjct: 181  FLGALLHSRVVS--KALILCPATIVSQWMDEWKRFYPF-VRIFFGFPNEDCE-------- 229

Query: 832  AKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRAD 891
                   GV+L+ Y  F+       VK+               D+L+ DE H IKN  A 
Sbjct: 230  -------GVYLMSYEKFK-----AGVKNFLW------------DVLILDEGHRIKNKNAQ 265

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
             T ++K+ + + R  L+G+P+QNNL E + + DFV  G LGS   F   F+  I  G + 
Sbjct: 266  ITLSVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYR 325

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
            N+++  V+   + S +L   ++ ++ R   + V   LP K   ++   L+P Q  LY R 
Sbjct: 326  NASNLQVEKAYRHSLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRV 385

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR----EDAEDSSS 1067
            L+              + +  +G   L ++ NHP +L       +P +    ED E+ +S
Sbjct: 386  LESKHIMKVLTG----KANLLSGISMLRKVCNHPRLL-------FPRKLGVSEDCEEEAS 434

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
            DE        GE     ++ L+    D               +Y  +  S K+ +L+D+L
Sbjct: 435  DEKN------GE-----DEALELPGAD--------------VSYDLVSSSCKIKILVDLL 469

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
                + G+K LVFSQ+I  LD+IE  + K                + R+DGRT +S R  
Sbjct: 470  KKWRSEGNKVLVFSQTIRMLDIIERCVRKYT--------------YLRMDGRTPTSSRPG 515

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            LV+RFNE  ++ V   L++T+ G LG+NL  A+R++I D  WNP+ D QA  RAWRYGQ 
Sbjct: 516  LVDRFNE--DEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAKERAWRYGQK 573

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            K V  YR +   T+EEK+Y++Q+ K+ L  +V+   ++ R  +K  +  LF F
Sbjct: 574  KGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLSNPRLSRFFNKSCINELFSF 626


>gi|302892777|ref|XP_003045270.1| transcription-coupled repair protein CSB/RAD26 [Nectria haematococca
            mpVI 77-13-4]
 gi|256726195|gb|EEU39557.1| transcription-coupled repair protein CSB/RAD26 [Nectria haematococca
            mpVI 77-13-4]
          Length = 1164

 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 190/605 (31%), Positives = 284/605 (46%), Gaps = 105/605 (17%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            + +++P  I   L  +Q  G++++ E   Q +          G I+   MGLGKT Q+IA
Sbjct: 386  DGLKLPGDIHPSLFGYQKTGVQWLAELYKQHV----------GGIVGDEMGLGKTVQLIA 435

Query: 772  FLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR---DRRA 828
            FL     S  L  R  ++V P  +L  W  EF +W P    PLRV +L        D + 
Sbjct: 436  FLAALHYSKKL-TRPVIVVAPATLLRQWVSEFHRWWP----PLRVAILHASGSGMMDPKV 490

Query: 829  ELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL--------VCD 880
            E  A       +      A R +  G  VK+ ++       LQ   D L        V D
Sbjct: 491  EDEADLDHFKPLATKSEKAARRIVNGV-VKNGHVLVTTYAGLQTYADTLLPVHWDYAVLD 549

Query: 881  EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 940
            E H I+N  A+ T   K++    R+ L+G+P+QNNL E + + DF+    LG+   FR +
Sbjct: 550  EGHKIRNPNAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRTQ 609

Query: 941  FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFVITVK 999
            F+ PI  G + N+++  V    + +  L E +  ++ QR+ ++V   DLP KT  V+  K
Sbjct: 610  FEIPIRQGGYANASNLQVMTAEKCAEALKETISEYLLQRLKVDVAA-DLPEKTEQVLFCK 668

Query: 1000 LSPLQRRLYKRFLDLHGFTNDRVSN--EKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
            L+  QR+ Y+ FL      +D VS+   + R+S + G   L +I NHP +L    DK   
Sbjct: 669  LTDGQRKAYETFL-----KSDEVSSILSRTRQSLY-GIDILRKICNHPDLL----DKS-- 716

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 1117
                               +G KP             G+   D+ N  L          S
Sbjct: 717  -------------------LGSKP-------------GY---DFGNPKL----------S 731

Query: 1118 GKMVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             K+ L  D+L   M  N G K+L+FSQ    L++IE  + +                + R
Sbjct: 732  AKLQLTKDLLQKVMIPN-GHKTLLFSQGKQMLNIIEKCIREC------------DISYVR 778

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T   +RQ ++++FNE  N  +   L++TR G LG NL  A+R+II D  WNP+ DL
Sbjct: 779  MDGETPVDQRQPMIDKFNEDPN--IHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDL 836

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ KPV  YRLM  GT+EEKIY RQ+ K+ +  +V+   +   +    ++ 
Sbjct: 837  QARERAWRLGQKKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRSSYDLSDLY 896

Query: 1296 HLFEF 1300
             LF F
Sbjct: 897  DLFSF 901


>gi|255726894|ref|XP_002548373.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240134297|gb|EER33852.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 1043

 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 197/655 (30%), Positives = 291/655 (44%), Gaps = 140/655 (21%)

Query: 709  KGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ 768
            K  E  R+P  I   L  +Q   ++++WE   Q            G IL   MGLGKT Q
Sbjct: 266  KLNENFRLPGDIYPSLFDYQKTCVQWLWELYSQKT----------GGILGDEMGLGKTIQ 315

Query: 769  VIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV------ 822
            +I+FL   +    L  +  LIV P  VL+ W  EF +W P    PLR  +L  +      
Sbjct: 316  IISFL-AGLHYSGLLDKPVLIVVPATVLNQWVNEFHRWWP----PLRCVILHSIGSGMNG 370

Query: 823  ----------------------------SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFG 854
                                        S+    E++ +   KG V +  Y   R   + 
Sbjct: 371  KNINEAKLEEFLENADPNSSKSSLSGVKSQINAKEIIDRVMEKGHVLVTTYVGLR--IYS 428

Query: 855  KHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN 914
            K++    + RE  +        +V DE H I+N  +D +   K +K   RI L+G+P+QN
Sbjct: 429  KYL----LPREWGY--------VVLDEGHKIRNPDSDISLTCKMIKTVNRIILSGTPIQN 476

Query: 915  NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG 974
            NL+E + + DFV  G LG+   F+ +F  PI  G + NS +  VK   + + +L + +  
Sbjct: 477  NLIELWSLFDFVFPGRLGTLPVFQQQFSIPINIGGYANSNNLQVKTAYKCAVVLRDLISP 536

Query: 975  FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAG 1034
            ++ R   + V KDLP K   V+ VKL+  Q+ LY++FL     + D  S  K +++   G
Sbjct: 537  YMLRRLKSDVAKDLPKKNEMVLFVKLTKPQQELYEKFLQ----SEDLDSILKGKRNMLMG 592

Query: 1035 YQALAQIWNHPGIL---QLTKDKGY--PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 1089
               L +I NHP ++    + K K Y  PSR                    K + + + LQ
Sbjct: 593  IDILRKICNHPDLVYRDAMMKKKSYGDPSR------------------SGKMQVLKNLLQ 634

Query: 1090 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 1149
                   +Q +    LL   T +          +LDIL            F  ++P L+ 
Sbjct: 635  ------IWQSEDHKTLLFCQTRQ----------MLDILEK----------FVANLPLLNG 668

Query: 1150 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1209
             EF                   ++ R+DG T  S RQ LV++FN   N  V   L++T+ 
Sbjct: 669  GEF-------------------NYLRMDGSTPISRRQMLVDKFNRDPNMHV--FLLTTKV 707

Query: 1210 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 1269
            G LG+NL  A+RVII D  WNP+ D+QA  RAWR GQ K +  YRLM  G++EEKIY RQ
Sbjct: 708  GGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQ 767

Query: 1270 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGD-DENPDPLTAV--SKENGQGSS 1321
            + K  L  +++   +  R     ++  LF  GD DE      A+   K N  GSS
Sbjct: 768  IFKTFLTNKILKDPKQRRFFKANDLHDLFTLGDQDEEGTETEAMFNEKNNNNGSS 822


>gi|225555676|gb|EEH03967.1| DNA dependent ATPase [Ajellomyces capsulatus G186AR]
          Length = 1276

 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 178/612 (29%), Positives = 280/612 (45%), Gaps = 106/612 (17%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
              RIP  I   L  +Q  G++++WE   Q +          G I+   MGLGKT QVIAF
Sbjct: 417  GYRIPGDIYPYLFDYQKTGVQWLWELYQQKV----------GGIIGDEMGLGKTIQVIAF 466

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR---DRRAE 829
            L     S  L  ++ ++V P  V+  W  EF +W      P RV +L        + R+E
Sbjct: 467  LAGLHHSKKL-TKSVIVVCPPTVMKQWVNEFHRW----WAPFRVSILHSSGSGMVNLRSE 521

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI---------CHALQDGPDILV-- 878
              A  R +  ++       R L   +    R + R +            LQ    +L+  
Sbjct: 522  SFADARLESQLWEPDQP--RRLPKEQKAAKRILKRVLEEGHVLVTTYSGLQTYRSLLIPV 579

Query: 879  ------CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                   DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DF     LG
Sbjct: 580  DWGCAILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFAFPMRLG 639

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPK 991
            +   FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  ++V   DLP K
Sbjct: 640  TLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAA-DLPKK 698

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
            +  V+  KL+ LQR  Y+ FL     +N+  S  + R+    G   L +I NHP      
Sbjct: 699  SEQVLFCKLTKLQRSAYEAFLG----SNEMSSILRGRREALYGIDMLRKICNHP------ 748

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                              ++  + V+ +KP                           + Y
Sbjct: 749  ------------------DLPEHKVLSKKP--------------------------SYNY 764

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
                 SGKM ++  +L +  + G K+L+F+Q    LD++E ++  +            G 
Sbjct: 765  GSASKSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFIISM-----------GGF 813

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
             + R+DG T    RQK+V+ FN   N  +   L++T+ G LG+NL  A+RVII D  WNP
Sbjct: 814  KYQRMDGNTPIKFRQKMVDEFNN--NPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNP 871

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            + D+QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T   
Sbjct: 872  STDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQM 931

Query: 1292 EEMLHLFEFGDD 1303
             ++  LF  G+D
Sbjct: 932  SDLHDLFTLGND 943


>gi|360044828|emb|CCD82376.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
          Length = 1393

 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 199/690 (28%), Positives = 309/690 (44%), Gaps = 134/690 (19%)

Query: 658  RQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEAVRIP 717
            RQ R + L+ QF+ + ++ +S   DG L  G  +                         P
Sbjct: 236  RQRRTELLEEQFAREHEVHSSNPSDGKLDGGFCV-------------------------P 270

Query: 718  SSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL---- 773
             SI ++L  +Q  G++++W+             KG G I+   MGLGKT Q+IA L    
Sbjct: 271  GSIWSRLFDYQRKGVKWLWD----------LHQKGCGGIIGDEMGLGKTIQIIALLAGLH 320

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR-----DRRA 828
            Y+ +   +  L   LIV P  VL+ W  EF  W P    P+RV +L          ++  
Sbjct: 321  YSNIEDRSYRLGPTLIVCPATVLNQWMSEFHSWWP----PIRVAILHSTGSGYGKPNKLM 376

Query: 829  ELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
            +++      G V L  Y+    +++   +  RN +             ++ DE H IKN 
Sbjct: 377  QMITN--NPGSVLLTTYSTL--VTYRDMLTSRNWS------------YVILDEGHKIKNP 420

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
             A+ T A+K      R+ L+GSP+QNNL E + + DFV  G LG   EF  +F  PI  G
Sbjct: 421  EAEATLAVKHFSTPHRLILSGSPIQNNLRELWSLFDFVCPGRLGPLPEFMQQFSIPITQG 480

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
             +  ++   V+   Q +  L   LK ++ R     V+  LP K+  V+  +L+  Q++LY
Sbjct: 481  GYAAASPLQVETAYQCACTLRNLLKPYLIRRLKADVQIQLPAKSEQVLFCRLTDYQQKLY 540

Query: 1009 KRFLDLHGFTNDRVSNEKI--RKSFFAGYQALAQIWNHPGILQ-LTKDKGYPSREDAEDS 1065
            + +L+       +V  + +  + + F     L  + NHP +     +D  + + E   D 
Sbjct: 541  REYLE------SQVCKDLLNGKGNIFPSLILLRNLCNHPDLATGGPRDSCFLNEEFESDK 594

Query: 1066 SSDEN--MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 1123
               EN  + Y+      PR                                  S KM+++
Sbjct: 595  QGIENVCLSYSWSRFGCPRR---------------------------------SSKMLVV 621

Query: 1124 LDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESS 1183
              +L    + G K L+FSQS   L L+E          +  +L K    + R+DG T  S
Sbjct: 622  ASLLKNWYDQGHKVLLFSQSRRMLTLLE----------RLVQLMKFS--YLRMDGTTPVS 669

Query: 1184 ERQKLVERFN-------EPLNKR-----VKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
            +R +L+ RFN       E +++      +   L++TR G LG+NL SANRV+I D  WNP
Sbjct: 670  QRHELIRRFNYRSTSDSEKIDRTSDHLDIFLFLLTTRVGGLGVNLTSANRVLIYDPDWNP 729

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            T DLQA  RAWR GQ++ V  YRL+  GT+EEKIY RQ+ K+ L  R++   +  R    
Sbjct: 730  TTDLQARERAWRIGQSRDVVIYRLLTSGTIEEKIYHRQIFKQFLTNRILKNPRQQRFFKT 789

Query: 1292 EEMLHLFEFGDDENPD-PLTAVS-KENGQG 1319
             ++  L  F D+ +   P TA+  K  G G
Sbjct: 790  NDLQELLTFEDESDIQIPETALYLKSEGMG 819


>gi|149035611|gb|EDL90292.1| rCG50332, isoform CRA_c [Rattus norvegicus]
          Length = 568

 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 173/552 (31%), Positives = 266/552 (48%), Gaps = 77/552 (13%)

Query: 757  LAHTMGLGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            +A  MGLGKT Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++P
Sbjct: 1    MADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQP 60

Query: 814  LRVFMLEDVSRDRRAELLAKWRA---KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHAL 870
            L +        DR+ E     R       + +I Y  FR      HV+           L
Sbjct: 61   LAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFR-----LHVE----------VL 105

Query: 871  QDG-PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
            + G   +++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV  G
Sbjct: 106  KKGNVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSG 165

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP 989
             LG++HEF+  F+ PI   +   ++  D ++  +R   L   +   + R   +++ K LP
Sbjct: 166  ILGTAHEFKKHFELPILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLP 225

Query: 990  PKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQ 1049
             K   V+  +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP ++ 
Sbjct: 226  VKIEQVVCCRLTPLQTELYKRFLR-QAKPEEELHEGKMSVSSLSSITSLKKLCNHPALIY 284

Query: 1050 LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEH 1109
               DK     +  E +                  +  F  G N                 
Sbjct: 285  ---DKCVAEEDGFEGT------------------LGIFPPGYNSKAV------------- 310

Query: 1110 TYKELDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK 1168
               E   SGKM++L  IL M  S   DK ++ S    TLDL E             KL +
Sbjct: 311  ---EPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFE-------------KLCR 354

Query: 1169 KGKDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDG 1227
              +  Y RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++ D 
Sbjct: 355  ARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDP 413

Query: 1228 SWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VH 1286
             WNP  D QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V 
Sbjct: 414  DWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE 473

Query: 1287 RTISKEEMLHLF 1298
            R  S  E+  LF
Sbjct: 474  RHFSLGELKELF 485


>gi|414871219|tpg|DAA49776.1| TPA: hypothetical protein ZEAMMB73_734228 [Zea mays]
          Length = 200

 Score =  240 bits (613), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 119/172 (69%), Positives = 141/172 (81%), Gaps = 8/172 (4%)

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 981
            MVDFVREGFLGS+HEFRNRFQNPIENGQHTNSTS+DVKIMNQRSHIL+EQLKGFVQR  M
Sbjct: 1    MVDFVREGFLGSTHEFRNRFQNPIENGQHTNSTSDDVKIMNQRSHILFEQLKGFVQRKSM 60

Query: 982  NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
            NVVK DLPPK VFVITVKLS LQR+LYKRFLD+HGF++   S EK  +SFFA YQ L+Q+
Sbjct: 61   NVVKNDLPPKKVFVITVKLSQLQRKLYKRFLDVHGFSSSGYS-EKSHRSFFAKYQTLSQV 119

Query: 1042 WNHPGILQLTKD-KGYPSREDA------EDSSSDENMDYNVVIGEKPRNMND 1086
            WNHPG+LQ+ K+ +G   REDA      ++SSSD+N++  +  GEK ++  D
Sbjct: 120  WNHPGLLQMAKEQRGNLRREDAVENFMMDESSSDDNVENYLPNGEKQKDKAD 171


>gi|85014197|ref|XP_955594.1| DNA repair and recombination protein [Encephalitozoon cuniculi GB-M1]
          Length = 695

 Score =  240 bits (612), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 180/593 (30%), Positives = 283/593 (47%), Gaps = 101/593 (17%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            E   +P  + + L  +Q  G+R+M    ++  R  K G      +LA  MGLGKT QVI 
Sbjct: 139  EGFSVPGFLWSSLFPYQQDGVRWM----LRLYRDEKGG------VLADDMGLGKTIQVIV 188

Query: 772  FLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELL 831
            FL   + S  +    ALI+ P  ++  W  E+ ++ P  ++    F  ED          
Sbjct: 189  FLGALLHSRVVS--KALILCPATIVSQWMDEWKRFYPF-VRIFFGFPNEDCE-------- 237

Query: 832  AKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRAD 891
                   GV+L+ Y  F+       VK+               D+L+ DE H IKN  A 
Sbjct: 238  -------GVYLMSYEKFK-----AGVKNFLW------------DVLILDEGHRIKNKNAQ 273

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
             T ++K+ + + R  L+G+P+QNNL E + + DFV  G LGS   F   F+  I  G + 
Sbjct: 274  ITLSVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYR 333

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
            N+++  V+   + S +L   ++ ++ R   + V   LP K   ++   L+P Q  LY R 
Sbjct: 334  NASNLQVEKAYRHSLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRV 393

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR----EDAEDSSS 1067
            L+              + +  +G   L ++ NHP +L       +P +    ED E+ +S
Sbjct: 394  LESKHIMKVLTG----KANLLSGISMLRKVCNHPRLL-------FPRKLGVSEDCEEEAS 442

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
            DE        GE     ++ L+    D               +Y  +  S K+ +L+D+L
Sbjct: 443  DEKN------GE-----DEALELPGAD--------------VSYDLVSSSCKIKILVDLL 477

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
                + G+K LVFSQ+I  LD+IE  + K                + R+DGRT +S R  
Sbjct: 478  KKWRSEGNKVLVFSQTIRMLDIIERCVRKYT--------------YLRMDGRTPTSSRPG 523

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            LV+RFNE  ++ V   L++T+ G LG+NL  A+R++I D  WNP+ D QA  RAWRYGQ 
Sbjct: 524  LVDRFNE--DEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAKERAWRYGQK 581

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            K V  YR +   T+EEK+Y++Q+ K+ L  +V+   ++ R  +K  +  LF F
Sbjct: 582  KGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLSNPRLSRFFNKSCINELFSF 634


>gi|374107777|gb|AEY96684.1| FAEL297Wp [Ashbya gossypii FDAG1]
          Length = 895

 Score =  240 bits (612), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 177/566 (31%), Positives = 272/566 (48%), Gaps = 85/566 (15%)

Query: 754  GCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRT---ALIVTPVNVLHNWKQEFMKWR-PS 809
            GCI+A  MGLGKT Q IA ++T +R  + G  T    +IV P ++++NW  E +KW  P 
Sbjct: 325  GCIMADEMGLGKTLQCIALMWTLLRQGSQGRPTIEKCIIVCPSSLVNNWANEIVKWLGPD 384

Query: 810  ELKPLRV-FMLEDVSRDRRAELLAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNM 862
             L PL +      +S    A+ + +W    G      V +I Y   R          RN+
Sbjct: 385  ALSPLAIDGRKSSLSNGSVAQSVRQWAIAQGRNVVKPVLIISYETLR----------RNV 434

Query: 863  AREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCM 922
              E     + G  +++ DE H +KN  + T  +L  + C RR+ L+G+P+QN+L EY+ +
Sbjct: 435  --ENLKGCKVG--LMLADEGHRLKNGDSLTFTSLDSINCPRRVILSGTPIQNDLSEYFAL 490

Query: 923  VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMN 982
            ++F   G LG+  +FR  F+ PI  G+  ++  +++     + H L + +  F+ R   +
Sbjct: 491  LNFSNPGLLGTRAQFRKNFEIPILRGRDADANDKEIAAGEVKLHELSQIVSKFIIRRTND 550

Query: 983  VVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIW 1042
            ++ K LP K   ++ V LSP+Q+ +Y+ F+          S E  +     G Q L  I 
Sbjct: 551  ILSKYLPCKYEHILFVNLSPMQKAIYEHFVR---------SREVAKLMKGTGSQPLKAIG 601

Query: 1043 ------NHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGF 1096
                  NHP +L L  +    +    +D  S   M +N   G                  
Sbjct: 602  LLKKLCNHPDLLDLPDEIAGSTNLIPDDYQS--AMTHNSRGGR----------------- 642

Query: 1097 FQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN-MGDKSLVFSQSIPTLDLIEFYLS 1155
                        H   +  +S K  +L   L    +   DK ++ S    TLDLIE    
Sbjct: 643  -----------SHVEVQTTHSSKFAILERFLFKIKHESNDKIVLISNYTQTLDLIE---- 687

Query: 1156 KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGIN 1215
            K+ R    G L        RLDG    ++RQKLV++FN+P  +     L+S++AG  GIN
Sbjct: 688  KMCRYNHYGVL--------RLDGTMTINKRQKLVDKFNDPSGEEF-IFLLSSKAGGCGIN 738

Query: 1216 LHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGL 1275
            L  ANR+I++D  WNP  D QA+ R WR GQ K  F YR +  G++EEKIY+RQ  K  L
Sbjct: 739  LIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFITTGSIEEKIYQRQSMKMSL 798

Query: 1276 AARVVD-RQQVHRTISKEEMLHLFEF 1300
            ++ VVD ++ V R  S + +  LF+F
Sbjct: 799  SSCVVDEKEDVERLFSSDNLRQLFQF 824


>gi|378730751|gb|EHY57210.1| DNA repair and recombination protein RAD54B [Exophiala dermatitidis
            NIH/UT8656]
          Length = 970

 Score =  240 bits (612), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 180/568 (31%), Positives = 279/568 (49%), Gaps = 90/568 (15%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMR--SVN 781
            L+ HQ  G++F++E ++  +R+      G GCILA  MGLGKT   IA L+T +R   V+
Sbjct: 287  LRPHQKEGVQFLYECVM-GLREYG----GQGCILADDMGLGKTLTTIALLWTLLRQSPVH 341

Query: 782  LG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS---RDRRAELLAKWR 835
             G   +R ALIV PV+++ NWK+EF KW  S+   L V   ED S   RD    +     
Sbjct: 342  RGPPVIRKALIVCPVSLIRNWKREFRKWLGSDR--LGVLEFEDQSTHVRDFDGRVYQ--- 396

Query: 836  AKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQA 895
                V +IGY   R ++      D      I        DI++CDE H +K  +    QA
Sbjct: 397  ----VMIIGYDRLRMVA-----DDLAQGHPI--------DIVICDEGHRLKTMKNKNAQA 439

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            ++ +  +RRI L+G+P+QN+L E+Y MV+FV +G LGS   F   F+ PI   +  +++ 
Sbjct: 440  IESLNTRRRIILSGTPIQNDLGEFYAMVNFVNDGCLGSQKGFIRDFEKPIIRSRQPDASE 499

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
            E+++     S  L      F+ R   +++   LPPKT +V+  K +  Q ++Y+  L   
Sbjct: 500  EEIERGRDASEELARTTSPFILRRTADILSDFLPPKTEYVLFCKPTQAQTKIYRNILKSA 559

Query: 1016 GFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNV 1075
             F +   S+E    S F     L ++ N P ++    +  Y   ED+  SSS   ++  +
Sbjct: 560  MFHSALRSSE----SAFQLITILKKLCNSPALM----NPKY-GNEDSTPSSSLTTLNEML 610

Query: 1076 VIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC-SNMG 1134
              G                    K + N L           S K+ LL ++L    +N  
Sbjct: 611  PEG------------------LSKLYHNSL-----------SCKIRLLDELLQQIRANTN 641

Query: 1135 DKSLVFSQSIPTLDLIEFYL--SKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
            +K ++ S    TL+LIE  L  S LP              + RLDG   + +RQ LV++F
Sbjct: 642  EKVVLISNYTSTLNLIEQLLVNSNLP--------------YLRLDGSIAAKKRQGLVDQF 687

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N   + +    L+S +AG +G+NL  A+R+I+ D  WNP  D QA+ R  R GQ +    
Sbjct: 688  NNSKSTQSFAFLLSAKAGGVGLNLIGASRLILFDVDWNPATDDQAVARIHRQGQKRHCKI 747

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            YR +  G +EE+I++RQV K  LA+ ++
Sbjct: 748  YRFLIKGGIEERIWQRQVVKRALASSIM 775


>gi|209880656|ref|XP_002141767.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
            muris RN66]
 gi|209557373|gb|EEA07418.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
            muris RN66]
          Length = 851

 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 177/615 (28%), Positives = 283/615 (46%), Gaps = 83/615 (13%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
            G   + + + ++  L+ HQ  G++FM+E ++  +R  +    G GCILA  MGLGKT Q 
Sbjct: 121  GTHKIEVDNILTKWLREHQRSGVKFMFECLM-GLRAFE----GHGCILADDMGLGKTLQS 175

Query: 770  IAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
            I  L+T +     G   +R A++V P +++ NW  E  KW    L       + +  R++
Sbjct: 176  ITILWTLLNQGFDGKPAVRKAVVVCPASLVKNWAYEIEKWL---LGKCPCTAVAEKDREK 232

Query: 827  RAELLA--KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAH 883
               + A  K+     V +  Y  FR      H  +          L   P D+++CDEAH
Sbjct: 233  VISMFAGFKYDRVSRVLIASYETFR-----MHASN----------LDGVPIDLIICDEAH 277

Query: 884  MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 943
             +KN +  T+ A+  +  ++R+ L+G+P+QN+L+E+Y +V       LG    FR  + N
Sbjct: 278  RLKNDKTKTSIAINNLPAKKRLLLSGTPIQNDLIEFYSLVSLANPQALGDVSTFRKIYAN 337

Query: 944  PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 1003
            PI  G+  ++T     +  QR   L      F+ R    ++ K LPPK +  I  +L+P 
Sbjct: 338  PILEGREPDATEYQQDLAAQRLQELSNITNLFILRRANTLLAKVLPPKIILNIFCRLTPF 397

Query: 1004 QRRLYKRFLDLHGF-----TNDRVSNEK---IRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            Q  LYK+FL          T     N +   +     +  Q+L ++ NHP +++      
Sbjct: 398  QSYLYKKFLRSAACRKMLDTETSCGNSRPIGLTGQVLSSIQSLMKLCNHPSLIKPKSSGS 457

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL-------HE 1108
            Y                     G        +L+      +    + + +L       + 
Sbjct: 458  Y---------------------GRGFEGCEKYLEQAQSKSYTSGGFGSGVLSRRKVGNNR 496

Query: 1109 HTYK-ELDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1166
              Y+   D SGK+ LL  +L     +  D+ ++ S    TLD+ E     L  P      
Sbjct: 497  SAYESRPDISGKLYLLSRLLFQIRRSTDDRVVLVSNYTQTLDVFERLCRDLQVP------ 550

Query: 1167 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1226
                    RLDG T  ++R  +V+ FN+P N      L+S++AG  GINL  ANR+++ D
Sbjct: 551  ------CVRLDGSTSITKRHSMVKIFNDP-NSNSFAFLLSSKAGGCGINLIGANRLVMFD 603

Query: 1227 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR---Q 1283
              WNP  D QA+ R WR GQ K  + YR  + GT+EEKIY+RQ+ K+GL+A +V      
Sbjct: 604  PDWNPANDKQALARVWRDGQKKNCYIYRFFSTGTIEEKIYQRQLCKDGLSAMLVTTSGDN 663

Query: 1284 QVHRTISKEEMLHLF 1298
            Q+   IS + +  LF
Sbjct: 664  QLKDAISADLVRDLF 678


>gi|406606250|emb|CCH42357.1| DNA repair and recombination protein [Wickerhamomyces ciferrii]
          Length = 905

 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 173/602 (28%), Positives = 282/602 (46%), Gaps = 102/602 (16%)

Query: 697  AITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCI 756
            ++ G I+       +  V I   +  KL+ HQV G++F++E  +  +R    G  G G +
Sbjct: 253  SLEGAIIMTKASSNDTDVVIDPFLGKKLRPHQVQGVKFLYE-CLMDLR----GFDGQGAL 307

Query: 757  LAHTMGLGKTFQVIAFLYTAMRSVNLGLRT-----ALIVTPVNVLHNWKQEFMKWRPSEL 811
            LA  MGLGKT   I  L+T ++    G  T      LI  PV ++ NWK+EF KW P  +
Sbjct: 308  LADDMGLGKTLMTITTLWTLLKQSPKGFETPVVNKVLIACPVTLIGNWKREFKKWLP--M 365

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVF---LIGYTAFRNLSFGKHVKDRNMAREICH 868
              L V  L   +   + +   K  A+  V+   ++GY    N+      KD     +   
Sbjct: 366  NRLNVLTLSSKNTTSKDKQDVKNFARTKVYQVLIMGYEKILNM------KDELKLSKF-- 417

Query: 869  ALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
                  D+L+CDE H +KN    T Q L  ++  ++I L+G+P+QN+L E++ ++DF+  
Sbjct: 418  ------DLLICDEGHRLKNNSNKTLQVLNSLEISKKILLSGTPIQNDLSEFFNIIDFINP 471

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM-NQRSHILYEQLKGFVQRMDMNVVKKD 987
            G LG+ ++F+  F NPI   + TN  + ++K   N++S  L +  K F+ R    ++   
Sbjct: 472  GILGNFNQFKRNFMNPILKSRETNCINPEIKSKGNEKSQELIDITKPFILRRTSAIMSNH 531

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALA----QIWN 1043
            LPP+T  V+  + + LQ  L+   L    F N       I K+  +G  +L     +I N
Sbjct: 532  LPPRTDIVLFCRPTNLQINLFNEVLGSTNFDN------MISKTTASGSLSLITMFKKICN 585

Query: 1044 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 1103
             P +  +  DK +    D + S+                                     
Sbjct: 586  SPSL--IINDKTFNQISDVKISNQIT---------------------------------- 609

Query: 1104 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1162
                         SGK+ +L+++L  + S   +K ++ S    TLD+++  L KL     
Sbjct: 610  -------------SGKIQVLIELLNEISSKTNEKVILVSNYTQTLDILQNILLKL----- 651

Query: 1163 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1222
                      + RLDG T + +R  +V  FN   +      L+S+++G +G+NL  A+R+
Sbjct: 652  -------NLTYQRLDGSTPNKDRDSIVNTFNTTSSISNFAFLLSSKSGGVGLNLIGASRL 704

Query: 1223 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 1282
            I+ D  WNP  DLQA+ R  R GQ KPVF YRL+  G ++EKI +RQ+ K  L+ + +D 
Sbjct: 705  ILFDNDWNPAIDLQAMARIHRDGQKKPVFIYRLVTTGCIDEKILQRQLMKNNLSDKFLDN 764

Query: 1283 QQ 1284
            Q+
Sbjct: 765  QK 766


>gi|449329940|gb|AGE96207.1| rad26-like DNA repair and recombination protein [Encephalitozoon
            cuniculi]
          Length = 695

 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 180/593 (30%), Positives = 283/593 (47%), Gaps = 101/593 (17%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 771
            E   +P  + + L  +Q  G+R+M    ++  R  K G      +LA  MGLGKT QVI 
Sbjct: 139  EGFSVPGFLWSSLFPYQQDGVRWM----LRLYRDEKGG------VLADDMGLGKTIQVIV 188

Query: 772  FLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELL 831
            FL   + S  +    ALI+ P  ++  W  E+ ++ P  ++    F  ED          
Sbjct: 189  FLGALLHSRVVS--KALILCPATIVSQWMDEWKRFYPF-VRIFFGFPNEDCE-------- 237

Query: 832  AKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRAD 891
                   GV+L+ Y  F+       VK+               D+L+ DE H IKN  A 
Sbjct: 238  -------GVYLMSYEKFK-----AGVKNFLW------------DVLILDEGHRIKNKNAQ 273

Query: 892  TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT 951
             T ++K+ + + R  L+G+P+QNNL E + + DFV  G LGS   F   F+  I  G + 
Sbjct: 274  ITLSVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYR 333

Query: 952  NSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRF 1011
            N+++  V+   + S +L   ++ ++ R   + V   LP K   ++   L+P Q  LY R 
Sbjct: 334  NASNLQVEKAYRHSLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRV 393

Query: 1012 LDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSR----EDAEDSSS 1067
            L+              + +  +G   L ++ NHP +L       +P +    ED E+ +S
Sbjct: 394  LESKHIMKVLTG----KANLLSGISMLRKVCNHPRLL-------FPRKLGVSEDCEEEAS 442

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
            DE        GE     ++ L+    D               +Y  +  S K+ +L+D+L
Sbjct: 443  DEKN------GE-----DEALELPGAD--------------VSYDLVSSSCKIKILVDLL 477

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
                + G+K LVFSQ+I  LD+IE  + K                + R+DGRT +S R  
Sbjct: 478  KKWRSEGNKVLVFSQTIRMLDIIERCVRKYT--------------YLRMDGRTPTSSRPG 523

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            LV+RFNE  ++ V   L++T+ G LG+NL  A+R++I D  WNP+ D QA  RAWRYGQ 
Sbjct: 524  LVDRFNE--DEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAKERAWRYGQK 581

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            K V  YR +   T+EEK+Y++Q+ K+ L  +V+   ++ R  +K  +  LF F
Sbjct: 582  KGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLSNPRLSRFFNKSCINELFSF 634


>gi|410978268|ref|XP_003995517.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Felis catus]
          Length = 838

 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 192/628 (30%), Positives = 290/628 (46%), Gaps = 116/628 (18%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E+   IP +I+  L+ +Q  G +F++ + IQ          G GCIL   MGLGKT QVI
Sbjct: 265  EDGDSIPYTINRYLRDYQREGAQFLYAHFIQ----------GKGCILGDDMGLGKTVQVI 314

Query: 771  AFLYTAM------------------RSV-----NLGLRTALIVTPVNVLHNWKQEFMKWR 807
            +FL   +                  RS+     ++  +  LIV P++VL+NW+ E   W 
Sbjct: 315  SFLAAVLHKKGTREDIENNMPEFLLRSMKKETPSIAKKMFLIVAPLSVLYNWRDELDTW- 373

Query: 808  PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
                   RV +L    +D   EL+   + K  + L  Y   R            +  +  
Sbjct: 374  ----GYFRVTVLHGNKKD--YELIRVKQRKCEIALTTYETLR------------LCLDEL 415

Query: 868  HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 927
            ++L+     ++ DEAH IKN +A  T+ +K +KC  RI LTG+ LQNN+ E +C++D+  
Sbjct: 416  NSLEWSA--VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAV 473

Query: 928  EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 987
             G LGS   F+ +F +P+E+GQ   +T  ++    +    L +++ G+  R    ++K  
Sbjct: 474  PGLLGSRIYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQ 533

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNE--------KIRKSFFA----GY 1035
            LP K   ++   L+  Q+ +Y+  L+    T    S+E        K R   F     G 
Sbjct: 534  LPKKEDRMVYCSLTDFQKAVYQTVLETKDVTLILQSSEPCSCNSGRKKRNCCFKTNSHGE 593

Query: 1036 QALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDG 1095
                  +++  +LQ         +E       D+      V  + P    DF+Q   D  
Sbjct: 594  TVKTLYFSYLAVLQ---------KETLIKRICDQ------VFSKFP----DFVQKSKDAA 634

Query: 1096 FFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLS 1155
            F             T  +  YSGKM +L  +L  C    DK L+FS S   LD+++ Y  
Sbjct: 635  F------------ETLSDPKYSGKMKVLQQLLNHCRKNKDKILLFSFSTKLLDVLQQY-- 680

Query: 1156 KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGIN 1215
                          G D+ RLDG T+S ER K+V+ FN    + V   L+ST AG LG+N
Sbjct: 681  ----------CMAAGLDYRRLDGSTKSEERIKIVKEFNS--TQDVNICLVSTMAGGLGLN 728

Query: 1216 LHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGL 1275
               AN V++ D +WNP  DLQAI RA+R GQ + V  +RL++ GT+EE +Y RQV K+ L
Sbjct: 729  FVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQL 788

Query: 1276 AARVVDRQQVHRTI-----SKEEMLHLF 1298
               VV  +   R       SKE    LF
Sbjct: 789  HCVVVGSENAKRYFEAVQGSKEHRGELF 816


>gi|340720108|ref|XP_003398485.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination protein
            RAD54B-like [Bombus terrestris]
          Length = 824

 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 188/651 (28%), Positives = 295/651 (45%), Gaps = 104/651 (15%)

Query: 710  GEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQV 769
             E  V + + +   L+ HQ  GI F++E I+     +K  +   G ILA  MGLGKT Q 
Sbjct: 217  NETEVFVDTCLVNVLRPHQRHGIVFLYECIMG----LKISNY-FGAILADEMGLGKTLQC 271

Query: 770  IAFLYTAMRSVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDR 826
            I  ++T ++    G   L+  LIVTP  + ++W +EF  W         V   ++ ++D 
Sbjct: 272  ITIIWTLLKKGPYGYPILKYILIVTPSCLCNSWNKEFKHWLGFHRISPYVVDAKNKTKDF 331

Query: 827  RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMI 885
            +  +      +  V +I Y               +M       +++ P ++++CDE H +
Sbjct: 332  KKHI------RNSVMIISY---------------DMLTRCEQEVEEIPFNLIICDEGHRL 370

Query: 886  KNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPI 945
            KN      + L  +KC+RRI LTG+P+QNNL E++ ++DFV    LGS+ EF+N ++ PI
Sbjct: 371  KNNDIKAAKILHNLKCKRRIILTGTPIQNNLQEFFTLIDFVNPTILGSNSEFKNYYEKPI 430

Query: 946  ENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQR 1005
               Q   +    V +  +R++ L E+ K F+ R     + K LP K   ++  +LS  Q+
Sbjct: 431  VASQCPTAPDHVVSLGTERANELREKTKCFILRRTQETINKYLPSKHELIVFCRLSIEQQ 490

Query: 1006 RLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK-------DKGYPS 1058
             LY +  D   + N   SN  I  S      AL +I NHP +    K        KG   
Sbjct: 491  DLYSQVTD--SWFNKNPSNNNI--SHLTVITALKKICNHPELFYNEKTELFCIDSKGIHK 546

Query: 1059 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 1118
              + +DS+                                                 Y G
Sbjct: 547  TSNIKDSTKTV----------------------------------------------YYG 560

Query: 1119 KMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDG 1178
            K+ ++  +L       +K ++ S    TLD++E   +            ++G  + RLDG
Sbjct: 561  KISIVQTLLRNXKKTEEKLVLVSYYTQTLDILETVCN------------REGLQFLRLDG 608

Query: 1179 RTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAI 1238
             T S+ R K++ERFN   N   K  L+S +AG +G+NL  A+R+I+ D  WNP  D QA+
Sbjct: 609  STTSNTRSKIIERFNST-NDNSKVFLLSAKAGGVGLNLPGASRLILFDSDWNPASDSQAM 667

Query: 1239 YRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR-TISKEEMLHL 1297
             R WR GQ K V+  RL+  GT+EEKI++RQ++K  L   VVD        +S  E+  L
Sbjct: 668  ARIWRDGQKKDVYILRLLTTGTIEEKIFQRQISKASLNETVVDLNPSSSFKLSMSELKDL 727

Query: 1298 FEFGDDEN--PDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMES 1346
            F    + N     L   S  NG   S+ T+  L  K    ++   DK ++S
Sbjct: 728  FTLAANTNCLTHDLMKCSC-NGYKKSEETSEKLHQKGATGYQFLEDKTLKS 777


>gi|348565314|ref|XP_003468448.1| PREDICTED: hypothetical protein LOC100728605 [Cavia porcellus]
          Length = 1526

 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 185/636 (29%), Positives = 281/636 (44%), Gaps = 124/636 (19%)

Query: 716  IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 775
            IP +I+  L+ +Q  G +F++ + IQ          G GCIL   MGLGKT QVI+FL  
Sbjct: 101  IPYTINRYLRDYQREGAQFLYRHYIQ----------GRGCILGDDMGLGKTVQVISFLAA 150

Query: 776  AMR------------------------SVNLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
             +                         + +   +  LIV P++VL+NWK E   W     
Sbjct: 151  VLHKKGTREDIENNMPEFLLRRVKKEPTSSTIKKMFLIVAPLSVLYNWKDELDTW----- 205

Query: 812  KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 871
               RV ++    +D   EL+   + K  + L  Y   R                +C    
Sbjct: 206  GYFRVTIVHGNKKDN--ELIRVRQRKCEIALTTYETLR----------------LCLDEL 247

Query: 872  DGPD--ILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
            +  +   ++ DEAH IKN +A  T+A+K +KC  RI LTG+ LQNN+ E +C++D+   G
Sbjct: 248  NSVEWSAVIVDEAHRIKNPKARVTEAMKALKCDIRIGLTGTILQNNMKELWCVMDWAVPG 307

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLP 989
             LGS   F+ +F +P+E+GQ   +T  ++    +    L  ++ G + R    ++   LP
Sbjct: 308  LLGSRIHFQKQFSDPVEHGQKHTATKRELATGRRAMRRLAARMSGCLLRRTKALISGQLP 367

Query: 990  PKTVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKI 1027
             K   ++   L+  Q+ +Y+  L+    T                            E +
Sbjct: 368  KKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSKPCTCNSGRKRRNCCYKTNSHGEAV 427

Query: 1028 RKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDF 1087
            +  +F+    L ++ NH  +LQ            A  +S  +      +  +      DF
Sbjct: 428  KALYFSYLAVLQKVANHVALLQ------------AASTSRHQETLIKRICDQVFSRFPDF 475

Query: 1088 LQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTL 1147
            +Q   D  F             T  +  YSGKM +L  +L       DK L+FS S   L
Sbjct: 476  VQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHFRKNKDKVLLFSFSTKLL 523

Query: 1148 DLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLIST 1207
            D+++ Y                G D+ RLDG T+S ER ++V+ FN    + V   L+ST
Sbjct: 524  DVLQQY------------CMASGLDYRRLDGSTKSEERLRIVKEFNS--TQDVNICLVST 569

Query: 1208 RAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYK 1267
             AG LG+N   AN VI+ D +WNP  DLQAI RA+R GQ + V  +RL++ GT+EE +Y 
Sbjct: 570  MAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYL 629

Query: 1268 RQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
            RQV K+ L   VV  +   R       SKE    LF
Sbjct: 630  RQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 665


>gi|295662396|ref|XP_002791752.1| DNA repair and recombination protein RAD26 [Paracoccidioides sp.
            'lutzii' Pb01]
 gi|226279878|gb|EEH35444.1| DNA repair and recombination protein RAD26 [Paracoccidioides sp.
            'lutzii' Pb01]
          Length = 1234

 Score =  239 bits (611), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 188/656 (28%), Positives = 289/656 (44%), Gaps = 146/656 (22%)

Query: 697  AITGYIVNVVREKGEE----------------AVRIPSSISAKLKAHQVVGIRFMWENII 740
             +TG IV    E  EE                  R+P  I   L  +Q  G++++WE   
Sbjct: 380  GVTGEIVAPAEESDEEEWFLPHPKVPDTELDGGYRVPGDIYHYLFDYQKTGVQWLWELYQ 439

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWK 800
            Q +          G I+   MGLGKT QVIAFL     S  L  +  ++V P  V+  W 
Sbjct: 440  QKV----------GGIIGDEMGLGKTIQVIAFLAGLHYSKKL-TKPIIVVCPPTVMKQWV 488

Query: 801  QEFMKWRPSELKPLRVFMLE------------------------DVSRDRRA-------- 828
             EF +W      P RV +L                         D ++ R+A        
Sbjct: 489  NEFHRW----WAPFRVSILHTSGSGMINLRRESYADARLESQIWDPNQPRKATKEQKAAK 544

Query: 829  ELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
            ++L +  AKG V +  Y+  +  S             +   ++ G  IL  DE H I+N 
Sbjct: 545  KILDRVLAKGHVLVTTYSGLQTYS------------SLLIPVEWGCSIL--DEGHKIRNP 590

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
                T   K+++   R+ L+G+P+QNNL E + + DFV    LG+   FRN+F+ PI  G
Sbjct: 591  DTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQG 650

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
             + N+++  V+   + +  L + +  ++ QR  ++V   DLP K+  V+  KL+ +QR  
Sbjct: 651  GYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAA-DLPKKSEQVLFCKLTKIQRSA 709

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            Y+ FL     +N+  S  + R+    G   L +I NHP                      
Sbjct: 710  YQAFLG----SNEMSSILRGRREALYGIDMLRKICNHP---------------------- 743

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
              ++  +  +  KP        G N                  Y     SGKM ++  +L
Sbjct: 744  --DLPEHKTLSTKP--------GYN------------------YGSAAKSGKMQVVKALL 775

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
             +    G KSL+F+Q    LD++E ++  +            G  + R+DG T    RQ 
Sbjct: 776  ELWKETGHKSLLFAQHRIMLDILERFIKSM-----------TGFKYQRMDGNTPIKLRQS 824

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            LV+ FN   N  +   L++T+ G LG+NL  A+RVII D  WNP+ D+QA  RAWR GQ 
Sbjct: 825  LVDEFNN--NPEIHIFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQK 882

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T    ++  LF  G+D
Sbjct: 883  REVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFHMSDLHDLFTLGND 938


>gi|212721508|ref|NP_001132124.1| chromatin complex subunit A [Zea mays]
 gi|194693490|gb|ACF80829.1| unknown [Zea mays]
          Length = 338

 Score =  239 bits (611), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 125/214 (58%), Positives = 159/214 (74%), Gaps = 3/214 (1%)

Query: 66  SKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALDELETE 125
           SKAA+AQE+LE ESL K++ EVR EL++ L GD+LE+AV  EM  ++ QWE  LD+LE  
Sbjct: 124 SKAAQAQESLEKESLDKIETEVRLELSERLQGDELESAVSTEMEQFQMQWENELDDLEIR 183

Query: 126 SAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIAGAEDF 185
           S+ LLEQLD AGIELP LY+ IE+QVPN C TEAWK R HW GSQV  E  +SI  A+++
Sbjct: 184 SSILLEQLDAAGIELPRLYKTIESQVPNVCQTEAWKSRTHWAGSQVPEEATQSIKKADEY 243

Query: 186 LQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDVSEKCA 245
           LQ+ RPVRR+HG+LLEEGASGFL  K+   G ++  K   + +W+S N++     S +  
Sbjct: 244 LQSCRPVRRKHGRLLEEGASGFLAGKVPV-GDDDSVK-CHEKSWSSFNELIKSKESAEN- 300

Query: 246 AFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEE 279
            FGS +WASVYLASTPQ+AAA+GL+FPGVDE EE
Sbjct: 301 TFGSSNWASVYLASTPQEAAALGLQFPGVDEAEE 334


>gi|357134225|ref|XP_003568718.1| PREDICTED: DNA repair protein rhp26-like [Brachypodium distachyon]
          Length = 1218

 Score =  239 bits (611), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 192/657 (29%), Positives = 290/657 (44%), Gaps = 140/657 (21%)

Query: 683  GDLSAGASIEVLGDAITGY--IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII 740
            GD +A AS E   + I G   +  V+ E G   +RIP SI  +L  +Q VG++++WE   
Sbjct: 366  GDTAASAS-ENEDEVIEGSDGLPPVILEGG---LRIPGSIYTQLFDYQKVGVQWLWELHC 421

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGL-RTALIVTPVNVLHNW 799
            Q            G I+   MGLGKT QV++FL +   S   G+ +++++V PV +L  W
Sbjct: 422  QRA----------GGIIGDEMGLGKTVQVLSFLGSLHES---GMYKSSIVVCPVTLLEQW 468

Query: 800  KQEFMKWRPSELKPLRVFMLEDVSRDR------------------------RAELLAKWR 835
            ++E  KW P      +V +L D +                           RA+   KW 
Sbjct: 469  RREASKWYPK----FKVEILHDSANGSSKKAKRSSDSESDFCSDSDQEEVTRAKPAKKWD 524

Query: 836  A--------KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKN 887
            A          G+ L  Y   R +      +D+ +  E  +A        V DE H I+N
Sbjct: 525  ALISRVVNSGSGLLLTTYEQLRIM------RDKLLDIEWGYA--------VLDEGHRIRN 570

Query: 888  TRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN 947
              A+ T   KQ++   RI +TG+P+QN L E + + DFV  G LG    F   F  PI+ 
Sbjct: 571  PNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFEIEFSVPIKV 630

Query: 948  GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRL 1007
            G + N+T   V    + + +L + +  ++ R     V   LP KT  V+   L+P QR  
Sbjct: 631  GGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPKKTEHVLFCSLTPEQRAT 690

Query: 1008 YKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSS 1067
            Y+ FL           N   R S + G   L +I NHP +L+         RE A     
Sbjct: 691  YRAFLASSEVEQIFDGN---RNSLY-GIDVLRKICNHPDLLE---------REHAA---- 733

Query: 1068 DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL 1127
                                                    +  Y   + SGKM ++  +L
Sbjct: 734  ---------------------------------------QDPDYGNPERSGKMKVVEQVL 754

Query: 1128 TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQK 1187
             +  + G + L+F+Q+   LD++E +L+    P            + R+DG T + +R  
Sbjct: 755  KVWKDQGHRVLLFAQTQQMLDILENFLTACDYP------------YRRMDGLTPAKQRMA 802

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            L++ FN      +   +++T+ G LG NL  ANRVII D  WNP+ D+QA  RAWR GQT
Sbjct: 803  LIDEFNN--TDEIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQT 860

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            + V  YRL+  GT+EEK+Y RQ+ K  L  +V+   Q  R     +M  LF   D++
Sbjct: 861  RDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQRRFFKARDMKDLFTLQDED 917


>gi|326481938|gb|EGE05948.1| dsDNA-dependent ATPase [Trichophyton equinum CBS 127.97]
          Length = 1004

 Score =  239 bits (611), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 179/584 (30%), Positives = 280/584 (47%), Gaps = 81/584 (13%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++F++E ++  +R       G G ILA  MGLGKT Q IA ++T ++   + 
Sbjct: 252  LREHQREGVKFLYECVM-GLRPFN----GEGAILADEMGLGKTLQTIALIWTLLKQNPIY 306

Query: 784  -----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKG 838
                 ++ ALIV PV +++NWK+EF KW  S+   + VF+ E   +  R       R+  
Sbjct: 307  GSQPVIKKALIVCPVTLINNWKKEFKKWLGSDR--IGVFVAE--GKGNRLSDFTMGRSYS 362

Query: 839  GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP--DILVCDEAHMIKNTRADTTQAL 896
             V +IGY   R+      V+D+         L  GP  DI+V DE H +K  +  + QA+
Sbjct: 363  -VMIIGYERLRS------VQDQ---------LTKGPGIDIVVADEGHRLKTVQNKSAQAI 406

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            + +   RRI L+G+P+QN L E++ MVDFV    LG+   F   F+ PI   +  N+  +
Sbjct: 407  QSLNTTRRIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMREFEGPIVGARQPNAPKK 466

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
             ++    RS  L E    F+ R   +++ K LPPKT +++    +  QR +Y   L    
Sbjct: 467  VIEKGKARSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQRNVYHHVLASPL 526

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVV 1076
            F +   ++E    S       L ++ N P +L          +   ED+   E+   +  
Sbjct: 527  FQSVLRNSE----STLQLITILKKVCNSPSLL----------KPKVEDNGKGEDSSMSAF 572

Query: 1077 IGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDK 1136
            I   P N++  L   +       D    LL+    K  +   K+VL+       SN    
Sbjct: 573  ISSLPPNIHRCLAAGSSGKIRVLD---QLLYNLQSKTTE---KVVLV-------SNYTST 619

Query: 1137 SLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPL 1196
              + +  + +LDL                       + RLDG T +++RQ LVE FN   
Sbjct: 620  LNLLANLLTSLDL----------------------PFLRLDGSTPATKRQALVEDFNRSP 657

Query: 1197 NKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLM 1256
            +      L+S +AG  G+NL  A+R+++ D  WNP  D+QA+ R  R GQ +    YRL+
Sbjct: 658  SSSCFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRLL 717

Query: 1257 AHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
              G +EEKI++RQVTK GLA  V+D++      S+EE+  LF  
Sbjct: 718  LKGGIEEKIWQRQVTKLGLADSVMDQKGGIAHFSQEELKDLFRL 761


>gi|302499754|ref|XP_003011872.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371]
 gi|291175426|gb|EFE31232.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371]
          Length = 921

 Score =  239 bits (611), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 178/585 (30%), Positives = 284/585 (48%), Gaps = 83/585 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++F++E ++  +R       G G ILA  MGLGKT Q IA ++T ++   + 
Sbjct: 252  LREHQKEGVKFLYECVM-GLRPFN----GEGAILADEMGLGKTLQTIALIWTLLKQNPIY 306

Query: 784  -----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKG 838
                 ++ ALIV PV +++NWK+EF KW  S+    R+ +     +  R       R+  
Sbjct: 307  GSQPVIKKALIVCPVTLINNWKKEFKKWLGSD----RIGVFVADGKGNRLSDFTMGRSYS 362

Query: 839  GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP--DILVCDEAHMIKNTRADTTQAL 896
             V +IGY   R+      V+D+         L  GP  DI+V DE H +K  +  ++QA+
Sbjct: 363  -VMIIGYERLRS------VQDQ---------LTKGPGIDIVVADEGHRLKTVQNKSSQAI 406

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            + +   RRI L+G+P+QN L E++ MVDFV    LG+   F   F+ PI   +  N+  +
Sbjct: 407  QSLNTTRRIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMRDFEGPIVGARQPNAPKK 466

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
             ++    RS  L E    F+ R   +++ K LPPKT +++    +  QR +Y   L    
Sbjct: 467  VIEKGKARSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQRSVYHHVLASPM 526

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVV 1076
            F +   ++E    S       L ++ N P +L          +   ED+   E+   + +
Sbjct: 527  FQSVLRNSE----SALQLITILKKVCNSPSLL----------KPKVEDNGKGEDTSMSAL 572

Query: 1077 IGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGD 1135
            +   P N++  L   +                        SGK+ +L  +L  + S   +
Sbjct: 573  LSSLPPNIHRCLAAGS------------------------SGKIRVLDQLLYNLQSKTKE 608

Query: 1136 KSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEP 1195
            K ++ S    TL+L+   L+ L  P            + RLDG T +++RQ LVE FN  
Sbjct: 609  KVVLVSNYTSTLNLLANLLTSLDLP------------FLRLDGSTPATKRQALVEDFNRS 656

Query: 1196 LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRL 1255
             +      L+S +AG  G+NL  A+R+++ D  WNP  D+QA+ R  R GQ +    YRL
Sbjct: 657  PSSSCFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRL 716

Query: 1256 MAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            +  G +EEKI++RQVTK GLA  V+D++      S+EE+  LF  
Sbjct: 717  LLKGGIEEKIWQRQVTKLGLADSVMDQKGGIAHFSQEELKDLFRL 761


>gi|242002592|ref|XP_002435939.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis]
 gi|215499275|gb|EEC08769.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis]
          Length = 982

 Score =  239 bits (611), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 181/589 (30%), Positives = 269/589 (45%), Gaps = 103/589 (17%)

Query: 727  HQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL---- 782
            +Q  G+R++WE   Q+           G I+   MGLGKT Q IAF +  +   NL    
Sbjct: 2    YQQTGVRWLWELHRQNT----------GGIVGDEMGLGKTIQTIAF-FAGLHHSNLRTLG 50

Query: 783  ----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR--DRRAELLAKWRA 836
                GL   +++ P  V+H W +EF +W P    P+RV +L D       +  L+ +   
Sbjct: 51   DSFQGLGPVVLICPTTVMHQWVREFHRWYP----PVRVAILHDSGSFAGSKETLVRQVNR 106

Query: 837  KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQAL 896
              GV +  Y     LS         + R   H        +V DE H I+N  A TT A 
Sbjct: 107  DRGVLVTSYAGVSKLS-------PMLLRHEWH-------YVVLDEGHKIRNPDAQTTLAC 152

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            KQ +   RI L+GSP+QNNL E + + DFV  G LG+   F   F  PI  G ++N+T  
Sbjct: 153  KQFRTTHRIILSGSPIQNNLRELWSLFDFVFPGKLGTLPVFMQEFAVPITQGGYSNAT-- 210

Query: 957  DVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
            DV+   + + +L + +K + ++RM  +V     LP K   V+  +L+  QR LY+++LD 
Sbjct: 211  DVQTAYKCASVLRDTIKPYLLRRMKDDVQCNLQLPKKNEQVLFCRLTDHQRDLYRQYLDT 270

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 1074
                +  V     R   F G   L +I NHP +     D G    +D + S+    M Y 
Sbjct: 271  PEIASILVG----RLQVFVGLINLRKICNHPDLF----DGGPKVFKDTDLSTLPAEMRY- 321

Query: 1075 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMG 1134
                                GF  +                 SGKM ++  +L +    G
Sbjct: 322  --------------------GFPGR-----------------SGKMAVVESLLKLWKRQG 344

Query: 1135 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 1194
             + L+F+QS   L ++E ++              +G  +  + G T  + RQ  + +FN 
Sbjct: 345  HRVLLFTQSRQMLLILEKFVQ------------DQGYKYMVMTGSTPIASRQPAINKFNA 392

Query: 1195 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYR 1254
              +  V   L++TR G LG+NL  A+RV+I D  WNP+ D QA  RAWR GQ + V  YR
Sbjct: 393  --DTSVFVFLLTTRVGGLGVNLTGADRVVIYDPDWNPSTDTQARERAWRIGQLRDVTIYR 450

Query: 1255 LMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDD 1303
            L+  GT+EEKIY RQ+ K+ L  RV+   +  R     ++  LF   DD
Sbjct: 451  LLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKTNDLHELFCLADD 499


>gi|326473366|gb|EGD97375.1| dsDNA-dependent ATPase [Trichophyton tonsurans CBS 112818]
          Length = 922

 Score =  239 bits (610), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 179/585 (30%), Positives = 282/585 (48%), Gaps = 83/585 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G++F++E ++  +R       G G ILA  MGLGKT Q IA ++T ++   + 
Sbjct: 252  LREHQREGVKFLYECVM-GLRPFN----GEGAILADEMGLGKTLQTIALIWTLLKQNPIY 306

Query: 784  -----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKG 838
                 ++ ALIV PV +++NWK+EF KW  S+    R+ +     +  R       R+  
Sbjct: 307  GSQPVIKKALIVCPVTLINNWKKEFKKWLGSD----RIGVFVADGKGNRLSDFTMGRSYS 362

Query: 839  GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP--DILVCDEAHMIKNTRADTTQAL 896
             V +IGY   R+      V+D+         L  GP  DI+V DE H +K  +  + QA+
Sbjct: 363  -VMIIGYERLRS------VQDQ---------LTKGPGIDIVVADEGHRLKTVQNKSAQAI 406

Query: 897  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 956
            + +   RRI L+G+P+QN L E++ MVDFV    LG+   F   F+ PI   +  N+  +
Sbjct: 407  QSLNTTRRIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMREFEGPIVGARQPNAPKK 466

Query: 957  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 1016
             ++    RS  L E    F+ R   +++ K LPPKT +++    +  QR +Y   L    
Sbjct: 467  VIEKGKARSEELAELTSPFILRRTADILSKHLPPKTEYILFCNPTSAQRNVYHHVLASPL 526

Query: 1017 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVV 1076
            F +   ++E    S       L ++ N P +L          +   ED+   E+   +  
Sbjct: 527  FQSVLRNSE----SALQLITILKKVCNSPSLL----------KPKVEDNGKGEDSSMSAF 572

Query: 1077 IGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGD 1135
            I   P N++  L   +                        SGK+ +L  +L  + S   +
Sbjct: 573  ISSLPPNIHRCLAAGS------------------------SGKIRVLDQLLYNLQSKTTE 608

Query: 1136 KSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEP 1195
            K ++ S    TL+L+   L+ L  P            + RLDG T +++RQ LVE FN  
Sbjct: 609  KVVLVSNYTSTLNLLANLLTSLDLP------------FLRLDGSTPATKRQALVEDFNRS 656

Query: 1196 LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRL 1255
             +      L+S +AG  G+NL  A+R+++ D  WNP  D+QA+ R  R GQ +    YRL
Sbjct: 657  PSSSCFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRL 716

Query: 1256 MAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
            +  G +EEKI++RQVTK GLA  V+D++      S+EE+  LF  
Sbjct: 717  LLKGGIEEKIWQRQVTKLGLADSVMDQKGGIAHFSQEELKDLFRL 761


>gi|357162876|ref|XP_003579552.1| PREDICTED: DNA excision repair protein ERCC-6-like [Brachypodium
            distachyon]
          Length = 999

 Score =  239 bits (610), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 187/607 (30%), Positives = 289/607 (47%), Gaps = 91/607 (14%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            ++P  I   L  HQ  G+R++W  ++          +G G IL   MGLGKT QV AFL 
Sbjct: 280  KLPGRIFKMLYPHQREGLRWLW--VLHC--------RGTGGILGDDMGLGKTMQVSAFLA 329

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRD--------R 826
                S  +  R  L+V P  +L +W           +K L V  L++  RD        R
Sbjct: 330  GLFHSRLI--RRVLVVAPKTLLTHW-----------MKELSVVGLKEKIRDYSGPSVNIR 376

Query: 827  RAELLAKWRAKGGVFLIGYTAFRN---LSFGKHVKDRNMAREICHALQDGP--DILVCDE 881
             +EL   +R  GG+ L  Y   RN   L  G    D +   E       G   D ++ DE
Sbjct: 377  NSELQYAFRV-GGILLTTYDIVRNNYKLMRGDFYNDADDEEE-------GRLWDYVILDE 428

Query: 882  AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 941
             H+IKN +    Q+L Q+ C  RI ++G+P+QNNL E + +  F     LG   EF+ R+
Sbjct: 429  GHIIKNPKTQRAQSLLQIPCVHRIVISGTPIQNNLKEMWALFFFCCPEILGDKDEFKTRY 488

Query: 942  QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG-FVQRMDMNVV-------KKDLPPKTV 993
            + PI  G   ++T+ +  I +  +  L E++K  F++RM   V         K L  K  
Sbjct: 489  ELPILRGNDKSATNREKHIGSNVAKELRERIKPYFLRRMKSEVFLDTGSTDDKKLSKKNE 548

Query: 994  FVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKD 1053
             +I +KL+  QR+LY+ FL      N  + +  ++ S  A    L +I +HP IL     
Sbjct: 549  LIIWLKLTACQRQLYEAFL------NSELVHSSMQGSPLAAITILKKICDHPLILTKRAA 602

Query: 1054 KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKE 1113
            +G     +  D  +++ +    ++ +  +N+ D     +DD   Q D             
Sbjct: 603  EGILEGMEGMDGLNNQEIG---MVEKMAKNLADM---AHDDDALQVDQ------------ 644

Query: 1114 LDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1173
             + S K+  ++ +L      G   L+FSQ+   L+LI            Q  +  +G  +
Sbjct: 645  -EVSCKLSFIMSLLRKLLEEGHHVLIFSQTRKMLNLI------------QEAILLEGYKF 691

Query: 1174 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1233
             R+DG T+ SER+++V+ F E      +  L++T+ G LG+ L  A RVI+VD +WNP+ 
Sbjct: 692  LRIDGTTKISERERIVKDFQE--GPGAQIFLLTTQVGGLGLTLTKAARVIVVDPAWNPST 749

Query: 1234 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEE 1293
            D Q++ RA+R GQTK V  YRLM  GT+EEKIYK QV K  L     ++++  R  SK +
Sbjct: 750  DNQSVDRAYRIGQTKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTATEQKEQTRYFSKRD 809

Query: 1294 MLHLFEF 1300
            +  LF  
Sbjct: 810  IQELFSL 816


>gi|84998504|ref|XP_953973.1| recombinational repair (RAD54 ) protein [Theileria annulata]
 gi|65304971|emb|CAI73296.1| recombinational repair (RAD54 homologue) protein [Theileria annulata]
          Length = 806

 Score =  239 bits (610), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 179/615 (29%), Positives = 286/615 (46%), Gaps = 102/615 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            +++ S +S  L+ HQ  G++F+++ ++        G  G GCILA  MGLGKT Q I  +
Sbjct: 127  IKVDSILSRFLRDHQRQGVQFIFDCLMG-----LKGFNGRGCILADDMGLGKTLQSITVM 181

Query: 774  YTAMRSVNLGL----------------RTALIVTPVNVLHNWKQEFMKWRPSELKPLRVF 817
            +T +   N GL                R   I+ P ++++NW+ E  KW   +     V 
Sbjct: 182  WTLL---NQGLDNKPGKTHNYTSSTAARKCAIICPASLVNNWESEIKKWLRGKCPCTAV- 237

Query: 818  MLEDVSRDRRAELLA--KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 874
               + S+++        K+     V +  Y  +R      H          C  L+    
Sbjct: 238  --AESSKEKVISSFQGFKYDRTSKVIISSYETYR-----LH----------CSYLEGVNI 280

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
            D+L+CDEAH +KN +  T+Q++     Q R+ L+G+P+QN+L E+Y +V       LG  
Sbjct: 281  DLLICDEAHRLKNDKTRTSQSISTSSAQMRLMLSGTPIQNDLNEFYSLVSLCNPDVLGDV 340

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
            + FR  F NPI  G+   +T  + +  ++R   L      FV R    ++ K LPPK + 
Sbjct: 341  NNFRRNFANPILIGREPYATPAEQQKASERLAELSNITNQFVLRRTNALLAKVLPPKIIL 400

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
             +   L+ +Q+ +YK F++   + N  ++ +++     +  Q+L ++ NHP    L K  
Sbjct: 401  NVFCNLTDVQKDIYKSFVNSKRWKN-IMNQDRVESRALSAIQSLMKLCNHP---YLIKRG 456

Query: 1055 GYPSREDAEDSSSD-ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK- 1112
            G  S  D +    D EN                                        YK 
Sbjct: 457  GLMSSPDVDSLLLDIENAT----------------------------------KSSKYKC 482

Query: 1113 -ELDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKG 1170
               D SGK ++L  +L     N  D+ ++ S    TLDL E    +   P          
Sbjct: 483  CRCDLSGKFLVLFRLLYQIRKNSNDRVVIISNYTQTLDLFERLCKECSYP---------- 532

Query: 1171 KDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWN 1230
              + RLDG T   +R KLV  FN+P N      L+S++AG  GINL  ANR+++ D  WN
Sbjct: 533  --FERLDGGTSIKKRHKLVTTFNDP-NSNSFVFLLSSKAGGCGINLIGANRLVLFDPDWN 589

Query: 1231 PTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR--QQVHRT 1288
            P  D QA+ R WR GQTK  + YR  + GT+EEKIY+RQ+ K+GL++ +V     ++  +
Sbjct: 590  PANDKQALARVWRDGQTKVCYIYRFFSTGTIEEKIYQRQICKDGLSSMLVTDGINELKDS 649

Query: 1289 ISKEEMLHLFEFGDD 1303
            +S E + +LFE+ ++
Sbjct: 650  LSGEYLKNLFEYKEE 664


>gi|403221169|dbj|BAM39302.1| recombinational repair protein [Theileria orientalis strain Shintoku]
          Length = 788

 Score =  239 bits (610), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 176/622 (28%), Positives = 296/622 (47%), Gaps = 104/622 (16%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
             +++ S +S  L+ HQ  G++F+++  +  ++  +    G GCILA  MGLGKT Q I  
Sbjct: 105  TIKVDSILSRFLRDHQRQGVQFIFD-CLMGLKDFE----GRGCILADDMGLGKTLQSITV 159

Query: 773  LYTAM-------------RSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML 819
            ++T +             R+ ++  R   I+ P ++++NW+ E  KW   +        +
Sbjct: 160  MWTLLNQGLDNKPGKKEKRNWSVAARKCAIICPASLVNNWESEIKKWLRGKCP---CTAI 216

Query: 820  EDVSRDRRAELLA--KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL 877
             D SR+R        K+     V +  Y  +R +  G +++  N+            D+L
Sbjct: 217  ADSSRERVISSFEGFKYDRNSRVIISSYETYR-MHCG-YLEGVNI------------DLL 262

Query: 878  VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEF 937
            +CDEAH +KN +  T+Q++     + R+ L+G+P+QN+L E+Y ++       LG  + F
Sbjct: 263  ICDEAHRLKNDKTRTSQSISASSAKMRLMLSGTPIQNDLNEFYSLISLCNPDVLGDVNNF 322

Query: 938  RNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 997
            R  F NPI  G+  ++T  + +  ++R   L      FV R    ++ K LPPK +  + 
Sbjct: 323  RKNFANPILIGREPDATPAEQQKASERLLELSNITNQFVLRRTNALLAKVLPPKIIMNVF 382

Query: 998  VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 1057
             KLS +Q++LY+ F+      N  ++ E + KS     Q+L ++ NHP +L   K  G  
Sbjct: 383  CKLSDVQKKLYRSFITSKKCKN-MINQETVPKSGLTAIQSLMKLCNHPYLL---KKGGVL 438

Query: 1058 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL--D 1115
            S  D                      ++  L    D+             ++ YK    D
Sbjct: 439  SSPD----------------------VDSLLTAIEDNS------------KNKYKNCRSD 464

Query: 1116 YSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
             SGK +LL  +L  +  +  D+ ++ S    TLDL E    +   P            + 
Sbjct: 465  LSGKFLLLFRLLYHIRRSSNDRVVIISNYTQTLDLFERLCKECKYP------------FE 512

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            RLDG T   +R KLV  FN+P N      L+S++AG  GINL  ANR+++ D  WNP  D
Sbjct: 513  RLDGATSIKKRHKLVTSFNDP-NSNSFIFLLSSKAGGCGINLIGANRLVLFDPDWNPAND 571

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIY-----------KRQVTKEGLAARVVD-- 1281
             QA+ R WR GQ K  + YR  + GT+EEKIY           +RQ+ K+GL++ +V   
Sbjct: 572  KQALARVWRDGQNKVCYIYRFFSSGTIEEKIYQVSSQCRLRWTQRQICKDGLSSMLVTDG 631

Query: 1282 RQQVHRTISKEEMLHLFEFGDD 1303
              ++  ++S E + ++F++ ++
Sbjct: 632  TNELKDSLSGELLKNIFDYKEE 653


>gi|355557962|gb|EHH14742.1| hypothetical protein EGK_00712 [Macaca mulatta]
          Length = 705

 Score =  239 bits (610), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 180/588 (30%), Positives = 278/588 (47%), Gaps = 117/588 (19%)

Query: 726  AHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---VNL 782
             H   G++F+WE +    R++       GCI+A  MGLGKT Q I  ++T +R       
Sbjct: 138  VHWYFGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKTLQCITLMWTLLRQSPECKP 192

Query: 783  GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW------RA 836
             +  A++V+P +++ NW  E  KW    ++PL +   +  S+D   + L  +      R 
Sbjct: 193  EIDKAMVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGSKDEIDQKLEGFMNQRGARV 249

Query: 837  KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADTTQA 895
               + +I Y  FR L  G               LQ G   +++CDE H +KN+   T QA
Sbjct: 250  PSPILIISYETFR-LHVG--------------VLQKGSVGLVICDEGHRLKNSENQTYQA 294

Query: 896  LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS 955
            L  +   RR+ ++G+P+QN+L+EY+ +V FV  G LG++HEF+  F+ PI  G+   ++ 
Sbjct: 295  LDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASE 354

Query: 956  EDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLH 1015
             D K+  +R      +L   V R                     L+PLQ  LYKRFL   
Sbjct: 355  ADRKLGEER----LRELTSIVNR---------------------LTPLQTELYKRFLR-Q 388

Query: 1016 GFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNV 1075
                + +   K+  S  +   +L ++ NHP ++               D   +E   +  
Sbjct: 389  AKPAEELREGKMSVSSLSSITSLKKLCNHPALIH--------------DKCVEEEDGF-- 432

Query: 1076 VIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTM---CSN 1132
             +G     ++ F  G +                    E   SGKM++L  IL +   CS+
Sbjct: 433  -VGA----LDLFPPGYSSKAL----------------EPQLSGKMLVLDYILAVTRSCSS 471

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVER 1191
              DK ++ S    TLDL E             KL +  +  Y RLDG     +R K+VER
Sbjct: 472  --DKVVLVSNYTQTLDLFE-------------KLCRARRYLYVRLDGTMSIKKRAKVVER 516

Query: 1192 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 1251
            FN P +      ++S++AG  G+NL  ANR+++ D  WNP  D QA+ R WR GQ K  +
Sbjct: 517  FNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCY 575

Query: 1252 AYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLF 1298
             YRL++ GT+EEKI++RQ  K+ L++ VVD +Q V R  S  E+  LF
Sbjct: 576  IYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELF 623


>gi|452839797|gb|EME41736.1| hypothetical protein DOTSEDRAFT_73948 [Dothistroma septosporum NZE10]
          Length = 1271

 Score =  239 bits (610), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 176/609 (28%), Positives = 285/609 (46%), Gaps = 102/609 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E   R+P  I   L  +Q  G++++WE   Q +          G I+   MGLGKT Q+I
Sbjct: 443  EGGYRVPGDIYPSLFDYQKTGVQWLWELYAQQV----------GGIIGDEMGLGKTIQII 492

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVS 823
            +FL     S  +  +  ++V P  V+  W  EF +W P    PLRV +L        DV 
Sbjct: 493  SFLAGLHYSGKID-KPVVVVCPATVMKQWVNEFHRWWP----PLRVSILHTSGSGMLDVR 547

Query: 824  RDRRAE--LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL---- 877
            R+   E  L     ++      GY   + +   K ++D ++       LQ   ++L    
Sbjct: 548  REESFEDDLEEDGFSRKSTHSKGYKQAKRI-VDKVLRDGHVLVTTYSGLQTYAELLIPTD 606

Query: 878  ----VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
                V DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG+
Sbjct: 607  WQYAVLDEGHKIRNPNTAITIYCKELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGT 666

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNVVKKDLPPKT 992
               F+N+F+ PI  G + N+++  V+   + +  L + +  + +QR  ++V   DLP K+
Sbjct: 667  LVNFKNQFEIPIRQGGYANASNLQVETAMKCAETLKDAISPYLLQRFKVDVA-ADLPKKS 725

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
              V+  KL+ LQR  Y+ FL+    + D  S    ++    G   L +I NHP ++    
Sbjct: 726  ERVLFCKLTKLQRDAYEWFLN----SEDMKSIMAGKRQALYGIDILRKICNHPDLV---- 777

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 1112
                      E  +  +  +Y   IG K                                
Sbjct: 778  ----------EHKTLSKKTNYKYGIGSK-------------------------------- 795

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
                 GKM ++  +L +    G K+L+F+Q    LD++E ++  +           +G +
Sbjct: 796  ----CGKMQVVKALLEIWKRNGHKTLLFAQHRIMLDILEKFVQGM-----------EGFN 840

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            + R+DG T   +RQ LV+ FN+  +  +   L++T+ G LG+NL  A+RVII D  WNP+
Sbjct: 841  YRRMDGNTSIKDRQDLVDEFNK--DPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPS 898

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 1292
             D+QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L+ +++   +  +T    
Sbjct: 899  TDVQARERAWRLGQKREVEIYRLMTAGTIEEKIYHRQIFKQFLSNKILRDPKQRQTFQLR 958

Query: 1293 EMLHLFEFG 1301
            ++  LF  G
Sbjct: 959  DLHDLFTLG 967


>gi|402587411|gb|EJW81346.1| hypothetical protein WUBG_07746 [Wuchereria bancrofti]
          Length = 537

 Score =  239 bits (610), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 183/584 (31%), Positives = 278/584 (47%), Gaps = 119/584 (20%)

Query: 761  MGLGKTFQVIAFL----YTAMRSVNL---GLRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            MGLGKT QVI+FL    ++ +        GL   LI+ P  ++  W +EF  W P     
Sbjct: 1    MGLGKTVQVISFLRGLAFSCLEDRGFSFSGLGPVLIICPTTLIRQWLKEFRTWFPL---- 56

Query: 814  LRVFMLEDVS--RDRRAELLAKW---RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICH 868
             RV +L        + A+L+ K    R+ G V L  Y  F      KH+ D+     I H
Sbjct: 57   CRVAILHSSGSFHGQSAQLIRKMVISRSDGSVLLTSYGTFAKNR--KHLVDK-----IWH 109

Query: 869  ALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
             +       + DE H I+N  A  T A+K+++   R+ L+GSPLQN+L E + ++DFV  
Sbjct: 110  YI-------ILDEGHKIRNPDAQITLAVKEIRTPHRLILSGSPLQNSLRELWSLIDFVYP 162

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQL---------------- 972
            G LG+   F ++F  PI  G + N+T+  V+   + + IL + +                
Sbjct: 163  GRLGALKSFMDKFSIPITQGGYANATAVQVRTAYKCACILRDLVSEDFIEEIYIKKCIGT 222

Query: 973  --KGFVQRMD----MNVVKKD------LPPKTVFVITVKLSPLQRRLYKRFLDLHGFTND 1020
              + F++R D    +  ++KD      LP KT  V+   ++P QR+LY+ +L       D
Sbjct: 223  LSRDFMERCDQSLSLKTLEKDVEMSIRLPTKTEQVLFCNITPCQRKLYEEYLSSR--ECD 280

Query: 1021 RVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEK 1080
            R+ + K+    F G   L ++ NHP ++      G P++ +  D+++DE MD+    G  
Sbjct: 281  RILSGKMDA--FVGLITLRKLCNHPDLVT-----GGPNKFNDYDATADEEMDF----GAP 329

Query: 1081 PRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVF 1140
             R                                  SGKM +L  +L +    G K L+F
Sbjct: 330  CR----------------------------------SGKMQVLKALLKLWKRQGQKVLLF 355

Query: 1141 SQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRV 1200
            SQS   L ++E ++             ++  ++ R+DG T    RQ LVE FN+  N  +
Sbjct: 356  SQSRQMLTILEKFVI------------QERYEYLRMDGTTAVRSRQLLVEEFNK--NNEI 401

Query: 1201 KCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGT 1260
               L++TR G LGINL  ANRV+I D  WNP+ D+QA  RAWR GQ + V  YRL+  GT
Sbjct: 402  FIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQARERAWRIGQERAVTIYRLLTGGT 461

Query: 1261 MEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            +EEKIY RQ+ K  L+ R++   +  R     E+  LF  GD +
Sbjct: 462  IEEKIYHRQIFKVFLSNRILVDPRQRRFFKTNELHELFCLGDSK 505


>gi|327263495|ref|XP_003216555.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Anolis carolinensis]
          Length = 756

 Score =  239 bits (609), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 191/633 (30%), Positives = 287/633 (45%), Gaps = 118/633 (18%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            +IP +I+  L+ +Q  G +F+  + ++            GCIL   MGLGKT QVI+FL 
Sbjct: 105  QIPYTINRYLRDYQREGAQFLHGHYVRK----------RGCILGDDMGLGKTVQVISFLA 154

Query: 775  TAMR----------SVNLGLRTA------------LIVTPVNVLHNWKQEFMKWRPSELK 812
              +           ++   LRT             LIV+P++VL+NWK E   W      
Sbjct: 155  AMLNKKGARADIENNMPEFLRTMKNEMSSVPKKIFLIVSPLSVLYNWKDELDTW-----G 209

Query: 813  PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD 872
              +V +L    +D         R K G   I  T +  L        R    E+ ++L+ 
Sbjct: 210  YFKVIVLHGNKKDYELN-----RIKKGKCEIALTTYETL--------RLFLDEL-NSLEW 255

Query: 873  GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                ++ DE H IKN +A  TQ +K + C+ R+ LTG+ LQNN+ E +C++D+   G LG
Sbjct: 256  SA--VIVDEVHRIKNPKAQITQTMKALTCKVRLGLTGTILQNNMKELWCVMDWAVPGLLG 313

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
            +   F+  F +P+E+GQ   +T  ++    +    L +Q+ G+  R    ++   LP K 
Sbjct: 314  NEARFKKEFSDPVEHGQRHTATKRELATGRKAMQKLAKQMSGYFLRRTKALINDQLPKKE 373

Query: 993  VFVITVKLSPLQRRLYKRFL---DLHGFTNDR-------------------VSNEKIRKS 1030
              ++   L+  QR +YK  L   D+      R                   V  E ++  
Sbjct: 374  DRMVYCSLTEFQRAVYKAVLETEDVRLVLQARKPCSCNSGRKRKNCCYKTNVHGETMQAL 433

Query: 1031 FFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQG 1090
            +F+    L +I NH G+LQ+            +++S  +      V  E      DF+Q 
Sbjct: 434  YFSYLTILRKIANHTGLLQI------------DNTSKQQEAHIRRVCEEVFSKFPDFVQL 481

Query: 1091 KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLI 1150
              D  F             T  +  YSGKM +L  +L       DK L+FS S   LD++
Sbjct: 482  SKDAAF------------ETISDPKYSGKMKVLQKLLNHFRKNKDKVLLFSFSTKLLDVL 529

Query: 1151 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1210
            E Y                G D+ RLDG T++ +R K+V+ FN    + V   L+ST AG
Sbjct: 530  EQY------------CMASGLDYRRLDGNTKAEDRVKIVKEFNG--MEEVNICLVSTMAG 575

Query: 1211 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1270
             LG+N   AN VI+ D +WNP  DLQAI RA+R GQ + V  +RL++ GT+EE +Y RQV
Sbjct: 576  GLGLNFVGANIVILFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEMMYLRQV 635

Query: 1271 TKEGLAARVVDRQQVHRTI-----SKEEMLHLF 1298
             K+ L   VV  +   R       SKE    LF
Sbjct: 636  YKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 668


>gi|358399258|gb|EHK48601.1| hypothetical protein TRIATDRAFT_53490 [Trichoderma atroviride IMI
            206040]
          Length = 1133

 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 184/617 (29%), Positives = 284/617 (46%), Gaps = 133/617 (21%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            +++P  I   L  +Q  G++++ E   QS+          G I+   MGLGKT Q+IAF+
Sbjct: 363  LKLPGDIYPSLFGYQKTGVQWLAELYKQSV----------GGIIGDEMGLGKTVQLIAFI 412

Query: 774  YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML------------ED 821
                 S  L  +  ++V P  +L  W  EF +W P    PLRV +L            ED
Sbjct: 413  AALHYSKKLK-KPVIVVAPATLLRQWVSEFHRWWP----PLRVSILHSSGSGMLNPTAED 467

Query: 822  ----------VSRDRRA--ELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHA 869
                       ++  +A  +++     KG V +  YT  +             A E+ H 
Sbjct: 468  EYDVEHFSPMATKSEKAARKIVKGVVQKGHVLVTTYTGLQTY-----------ADELLHV 516

Query: 870  LQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREG 929
              D     V DE H I+N  A+ T   K++    R+ L+G+P+QNNL E + + DF+   
Sbjct: 517  EWD---YAVLDEGHKIRNPNAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPM 573

Query: 930  FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNVVKKDL 988
             LG+   F+ +F+ PI  G + N+++  V    + +  L E +  + +QR+ ++V   DL
Sbjct: 574  RLGTLVNFKQQFEIPIRQGGYANASNLQVMTAEKCAEALKETISEYLLQRLKVDVA-ADL 632

Query: 989  PPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS---NEKIRKSFFAGYQALAQIWNHP 1045
            P KT  V+  KL+  QR+ Y+RF+      +D V+   N K R+S + G   L +I NHP
Sbjct: 633  PEKTEQVLFCKLTESQRKAYERFIG-----SDEVAAILNRK-RQSLY-GIDILRKICNHP 685

Query: 1046 GILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDL 1105
             +L    DK  PS+                                              
Sbjct: 686  DLL----DKSLPSKPG-------------------------------------------- 697

Query: 1106 LHEHTYKELDYSGKMVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1163
               + Y +   S K+ L  D+L   M  N G K L+FSQ    L++IE  + +       
Sbjct: 698  ---YDYGDPKLSAKLQLTKDLLQKVMIPN-GHKMLLFSQGKQMLNIIEKCIREC------ 747

Query: 1164 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1223
                  G  + R+DG T   +RQ ++++FN   +  +   L++TR G LG NL  A+R+I
Sbjct: 748  ------GISYLRMDGETPIDQRQPMIDKFN--TDPDIHVFLMTTRTGGLGTNLTGADRII 799

Query: 1224 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1283
            I D  WNP+ DLQA  RAWR GQ+KPV  YRLM  GT+EEKIY RQ+ K+ +  +V+   
Sbjct: 800  IFDPDWNPSTDLQARERAWRLGQSKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDP 859

Query: 1284 QVHRTISKEEMLHLFEF 1300
            +   +    ++  LF F
Sbjct: 860  KQRSSYDLSDLYDLFTF 876


>gi|119627334|gb|EAX06929.1| RAD54-like (S. cerevisiae), isoform CRA_a [Homo sapiens]
          Length = 567

 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 272/555 (49%), Gaps = 83/555 (14%)

Query: 757  LAHTMGLGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKP 813
            +A  MGLGKT Q I  ++T +R        +  A++V+P +++ NW  E  KW    ++P
Sbjct: 1    MADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQP 60

Query: 814  LRVFMLEDVSRDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 867
            L +   +  S+D   + L  +      R    + +I Y  FR L  G             
Sbjct: 61   LAI---DGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFR-LHVG------------- 103

Query: 868  HALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 926
              LQ G   +++CDE H +KN+   T QAL  +   RR+ ++G+P+QN+L+EY+ +V FV
Sbjct: 104  -VLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFV 162

Query: 927  REGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKK 986
              G LG++HEF+  F+ PI  G+   ++  D ++  +R   L   +   + R   +++ K
Sbjct: 163  NSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSK 222

Query: 987  DLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPG 1046
             LP K   V+  +L+PLQ  LYKRFL       + +   K+  S  +   +L ++ NHP 
Sbjct: 223  YLPVKIEQVVCCRLTPLQTELYKRFLR-QAKPAEELLEGKMSVSSLSSITSLKKLCNHPA 281

Query: 1047 ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 1106
            ++                        Y+  + E+     D   G  D   F   + +  L
Sbjct: 282  LI------------------------YDKCVEEE-----DGFVGALD--LFPPGYSSKAL 310

Query: 1107 HEHTYKELDYSGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK 1165
                  E   SGKM++L  IL +  S   DK ++ S    TLDL E             K
Sbjct: 311  ------EPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------K 351

Query: 1166 LWKKGKDWY-RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVII 1224
            L +  +  Y RLDG     +R K+VERFN P +      ++S++AG  G+NL  ANR+++
Sbjct: 352  LCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVM 410

Query: 1225 VDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ 1284
             D  WNP  D QA+ R WR GQ K  + YRL++ GT+EEKI++RQ  K+ L++ VVD +Q
Sbjct: 411  FDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQ 470

Query: 1285 -VHRTISKEEMLHLF 1298
             V R  S  E+  LF
Sbjct: 471  DVERHFSLGELKELF 485


>gi|119194699|ref|XP_001247953.1| hypothetical protein CIMG_01724 [Coccidioides immitis RS]
          Length = 846

 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 190/624 (30%), Positives = 292/624 (46%), Gaps = 108/624 (17%)

Query: 692  EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK 751
            E+LG      I   V E+ +  V I   ++  L+ HQV G++F++      I    +G  
Sbjct: 178  EILG------IKKNVEERPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANG-- 229

Query: 752  GLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 811
               CI+A  MGLGKT         +  +    ++  +I  P  ++ NW  E +KW   + 
Sbjct: 230  ---CIMADEMGLGKT---------SPEAGKPTVQKVVIACPATLVGNWANELVKWLGKDA 277

Query: 812  KPLRVFMLEDVSRDRRAEL---LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNM 862
              +  F+++   +  +AEL   L +W    G      V ++ Y   R L+ G+       
Sbjct: 278  --VNPFVID--GKASKAELTSQLRQWAIASGRQVVRPVLIVSYETLR-LNVGE------- 325

Query: 863  AREICHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 921
                   L++ P  +L+CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EYY 
Sbjct: 326  -------LKETPIGLLLCDEGHRLKNGESQTFTALNGLNVARRVLLSGTPIQNDLSEYYS 378

Query: 922  MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 981
            +++F   G LGS  EF  RF+ PI  G+  + T E+ K  ++    L   +  F+ R   
Sbjct: 379  LLNFTNPGVLGSRSEFHKRFEMPILRGRDADGTEEERKKGDECLAELLGIVNKFIIRRSN 438

Query: 982  NVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQAL 1038
            +++ K LP K   V+   L+P Q  LY  F+   D+      + S              L
Sbjct: 439  DILSKYLPVKYEHVVFCNLAPFQMDLYNHFIQSPDIKSLLRGKGSQP------LKAIGIL 492

Query: 1039 AQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQ 1098
             ++ NHP +L L+ D     +   +D    E                   +G++ D    
Sbjct: 493  KKLCNHPDLLNLSADLPGSEQFFPDDYVPPEG------------------RGRDRD---V 531

Query: 1099 KDWWNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKL 1157
            K W              YSGKM++L  +L  +  +  DK ++ S    TLDL E    KL
Sbjct: 532  KSW--------------YSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFE----KL 573

Query: 1158 PRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLH 1217
             R    G L        RLDG     +RQKLV+RFN+P  +     L+S++AG  GINL 
Sbjct: 574  CRSRGYGSL--------RLDGTMTVKKRQKLVDRFNDPDGEEF-VFLLSSKAGGCGINLV 624

Query: 1218 SANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAA 1277
             ANR+++ D  WNP  D QA+ R WR GQ K  F YR +A G++EEKI++RQ  K+ L++
Sbjct: 625  GANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSS 684

Query: 1278 RVVDR-QQVHRTISKEEMLHLFEF 1300
             VVD  + V R  S + +  LF+F
Sbjct: 685  CVVDSAEDVERHFSLDSLRELFQF 708


>gi|156379220|ref|XP_001631356.1| predicted protein [Nematostella vectensis]
 gi|156218395|gb|EDO39293.1| predicted protein [Nematostella vectensis]
          Length = 836

 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 183/594 (30%), Positives = 288/594 (48%), Gaps = 79/594 (13%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   +   L+ HQ  G+ F++E ++  +R       G G ILA  MGLGKT Q IA +
Sbjct: 215  VVVDPHLGQHLRPHQRDGVLFLYECVM-GLRNFN----GNGAILADEMGLGKTLQCIALI 269

Query: 774  YTAMRSVNLGLRTA----LIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T  +    G +      LI+TP +++ NW  EF KW  +E   +RVF    V+ D R +
Sbjct: 270  WTLHKQGPYGGQPVCNRILIITPGSLVKNWCAEFRKWLGNER--MRVF---PVTSDMRVK 324

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
                      V +I Y  F        ++ ++    I        D+ +CDEAH +KN+ 
Sbjct: 325  EFI-ISPIYPVLIISYEMF--------IRSQDDIMNIKF------DLFICDEAHRLKNSA 369

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              TT  +  +K +RR+ LTG+P+QN+L E++ +++    G LG+   FR  ++ PI NGQ
Sbjct: 370  IKTTTLISGLKTRRRVLLTGTPIQNDLKEFHTLIELCNPGVLGTL--FRRVYEQPIVNGQ 427

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
               +TSED  +   R+  L    + F  R    + +K LPPK   V+  + + LQ  LY+
Sbjct: 428  QPGATSEDKLLGQTRASELNRLTRLFFLRRTSEINEKYLPPKVEMVVFCRPAHLQVTLYR 487

Query: 1010 RFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDE 1069
              L    F    +       +      AL ++ NHP +L       Y + + A     ++
Sbjct: 488  HLLT-SRFLRGCLRASCPSSTHLECIGALKKLCNHPTLL-------YSASQGANTLGDED 539

Query: 1070 NMD-YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT 1128
             +  Y+ ++   P                         ++ +   +  SGK+ +L  +L 
Sbjct: 540  QVSLYDGLLKLFPE-----------------------CNDASELSIAQSGKLTVLNSMLE 576

Query: 1129 MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQK 1187
                 G++ ++ S    TLD+++             KL    K  Y RLDG T +++RQ 
Sbjct: 577  EIHCTGERVVLVSNYSQTLDILQ-------------KLCTVKKYRYLRLDGSTPTAKRQS 623

Query: 1188 LVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQT 1247
            LVERFN    +     L+S++AG +G+NL  A+R+I+ D  WNP  DLQA+ R WR GQ 
Sbjct: 624  LVERFNAKHCQDF-VFLLSSKAGGVGLNLIGASRLILYDIDWNPANDLQAMARVWRDGQR 682

Query: 1248 KPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTISKEEMLHLFEF 1300
            + V  YRL+  GT+EEKIY+RQ TK+GL+  V  DR+QV    S+E++  LF  
Sbjct: 683  RRVVIYRLLTTGTIEEKIYQRQTTKQGLSGAVADDRKQVKVDFSQEDVKDLFTL 736


>gi|115921268|ref|XP_787494.2| PREDICTED: DNA repair and recombination protein RAD54B, partial
            [Strongylocentrotus purpuratus]
          Length = 629

 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 183/585 (31%), Positives = 283/585 (48%), Gaps = 78/585 (13%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   + +KL+ HQ  G+ F++E I+  +R+ +    G G ILA  MGLGKT Q I  +
Sbjct: 42   VVVDPHLVSKLRPHQQKGVIFLYECIM-GLRQYE----GCGAILADEMGLGKTLQCITLV 96

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T  +    G    ++  LIVTP +++ NW +EF KW  SE   + VF    VS D++ E
Sbjct: 97   WTLFKQGPYGGKPIIKRVLIVTPGSLVKNWCREFRKWLGSER--ISVF---PVSSDKKVE 151

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
               K      V +I Y           V+  +  R I        D++VCDE H +KN+ 
Sbjct: 152  EFKK-SPLFPVMVISYEMM--------VRYADDIRGITF------DLVVCDEGHRLKNST 196

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              T   L  +  +RRI LTG+P+QN+L E+Y +V+F   G LG+S  F   ++ PI    
Sbjct: 197  IKTASLLSSLAVRRRILLTGTPIQNDLQEFYSIVEFCNPGVLGTSGSFHRVYEEPILRSN 256

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
              ++T E+  +   R+  L      FV R    +  K LPPK   V+  K S LQ RLY+
Sbjct: 257  QPSATKEEKTLGAARATELSRLTSLFVLRRTQEINNKYLPPKVETVVFCKPSALQLRLYQ 316

Query: 1010 RFLD----LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDS 1065
              L         +    S+            AL ++ N P +L       Y +   A++ 
Sbjct: 317  HLLRSPLIRSCLSRGYASSASAGSPHLVCIGALKKLCNDPSLL-------YQASRKADEE 369

Query: 1066 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL--HEHTYKE----LDYSGK 1119
                          K R    +L   +D+   ++  +  LL  +   Y E    L + GK
Sbjct: 370  G-------------KRRGGESWLLDHDDE---EESLYKGLLPIYPPEYTEGRPLLAHCGK 413

Query: 1120 MVLLLDILTMC---SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 1176
            + +L ++L          ++ ++ S    TLD+++   S             +G  + RL
Sbjct: 414  LCVLSEMLRAMHADPTRRERLVLVSNYTQTLDILQALCSI------------EGYQFCRL 461

Query: 1177 DGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1236
            DG T +++RQ +VE FN    K     L+S++AG +G+NL  A+R+++ D  WNP  DLQ
Sbjct: 462  DGSTPTAKRQSIVEHFNSSYAKET-IFLLSSKAGGVGLNLIGASRLLLYDIDWNPANDLQ 520

Query: 1237 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 1281
            A+ R WR GQ K V+ YRL+  GT+EEKIY+RQ++K+ L+  VVD
Sbjct: 521  AMARVWRDGQKKTVYIYRLITAGTIEEKIYQRQISKQSLSGAVVD 565


>gi|430814726|emb|CCJ28090.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 876

 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 177/592 (29%), Positives = 275/592 (46%), Gaps = 101/592 (17%)

Query: 731  GIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIV 790
            GI+++WE   Q          G+G I+A  MGLGKT Q++ FL     S  L     LIV
Sbjct: 227  GIQWLWELHCQ----------GVGGIIADEMGLGKTIQIVGFLGGLHYSQKLS-GPILIV 275

Query: 791  TPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR---DRRAELLAKWRAKGGVFLIGYTA 847
             P  ++  W  EF KW P    P RV +L        D + E L K + +   FL    +
Sbjct: 276  CPATIMRQWVAEFHKWWP----PFRVVILHTTGSALIDIKHEELEK-QFEDDKFLKNTVS 330

Query: 848  FRNLSFGKHVKDRNMAREICHAL---QDGPDIL------------VCDEAHMIKNTRADT 892
            F++       K     + + HAL     G  +             + DE H I+N  +D 
Sbjct: 331  FKSKVIKNIKKIIEKVKTLGHALIITYSGLRVYREYLFPNKWAYCILDEGHKIRNPDSDV 390

Query: 893  TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 952
            +   KQ+K   RI L+G+P+QNNL E + + DF+  G LG+   F+++F  PI  G + N
Sbjct: 391  SFICKQIKTPHRIILSGTPIQNNLEELWSLFDFIFPGHLGTLPIFQSQFAIPINIGGYAN 450

Query: 953  STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 1012
            +T+  V+   + + +L + +  ++ R     +  DLP K+  V+  KL+  Q+  Y+ FL
Sbjct: 451  ATNIQVQTAYKCACVLRDLISPYLLRRMKADMAVDLPSKSEQVLFCKLTEFQKEAYRSFL 510

Query: 1013 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 1072
            +    + D     + +K    G   L +I NHP ++              E    + +++
Sbjct: 511  N----SKDMDLILEGKKQILYGIDILRKICNHPDLIY------------RETFLKNNDIE 554

Query: 1073 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 1132
            Y       PR                                  SGKM+++ +IL +   
Sbjct: 555  YG-----DPRK---------------------------------SGKMLVIKEILKLWKK 576

Query: 1133 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1192
             G ++L+F+Q+   LD++E ++ K+ +             + R+DG T  S RQ LV++F
Sbjct: 577  QGHRTLLFAQTKQMLDILEKFIKKMDQFS-----------YCRMDGGTSISSRQSLVDKF 625

Query: 1193 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 1252
            N   +  +   L++T+ G LGINL  ANRVII D  WNP+ DLQA  RAWR GQ K V  
Sbjct: 626  NN--SNDIDIFLLTTKVGGLGINLTGANRVIIFDPDWNPSTDLQARERAWRLGQKKDVII 683

Query: 1253 YRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 1304
            YRLM  GT+EEKIY RQ+ K+ L  +++   +  R     ++  LF    D+
Sbjct: 684  YRLMTSGTIEEKIYHRQIFKQFLTNKILKDPKQRRFFKATDLYDLFSLKSDD 735


>gi|299753319|ref|XP_001833199.2| SNF2 family domain-containing protein [Coprinopsis cinerea
            okayama7#130]
 gi|298410246|gb|EAU88472.2| SNF2 family domain-containing protein [Coprinopsis cinerea
            okayama7#130]
          Length = 840

 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 195/623 (31%), Positives = 302/623 (48%), Gaps = 104/623 (16%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V I   +S  L+ HQV G++F++      +      +   GCI+A  MGLGKT Q IA +
Sbjct: 219  VVIDPRLSKVLRPHQVEGVKFLYRCTTGMVE-----ENQYGCIMADEMGLGKTLQCIALM 273

Query: 774  YTAMR-SVNLGLRT---ALIVTPVNVLHNWKQEFMKWRPSE-LKPLRVFMLEDVSRDRRA 828
            +T ++ S + G  T    +I  P +++ NW  E  KW   + + PL +       +  +A
Sbjct: 274  WTLLKQSPHPGRPTIEKCIIACPSSLVKNWANELTKWLGKDTVTPLAI-----DGKGGKA 328

Query: 829  ELL---AKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 879
            ELL   A+W A  G      V ++ Y   R L+                  + G  +L+C
Sbjct: 329  ELLEKVARWVAARGRNVTQPVMIVSYETLRTLTV------------YLAGCKIG--LLLC 374

Query: 880  DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 939
            DE H +KN+ + T QAL  +   RR+ LTG+P+QN+L EY+ +++F    FLGS ++FR 
Sbjct: 375  DEGHRLKNSESLTFQALNSLDVNRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKNDFRK 434

Query: 940  RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG----FVQRMDMNVVKKDLPPKTVFV 995
             F+N I  G+ +++ S+ VK  ++      ++L G    F+ R   +++ K LP K   V
Sbjct: 435  NFENAIIRGRDSDA-SDAVKAASEAK---LKELGGLVMKFIIRRTNDLLSKYLPVKYEQV 490

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA--------LAQIWNHPGI 1047
            +   LS  Q  LY+ F          +++ +I K+   G ++        L ++ NHP +
Sbjct: 491  VFCGLSDFQLALYRLF----------ITSPEI-KALLRGTESQPLKAINILKKLCNHPEL 539

Query: 1048 LQLTKD-KGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 1106
            L L KD KG                D+ +  G          +G   +   + DW    L
Sbjct: 540  LDLPKDLKG---------------SDHLIPEGFVGAGQQQQGRGAGRNVGVRCDWSGKFL 584

Query: 1107 HEHTYKELDYSGKMV------LLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                      +G  V       L  I T  +   DK ++ S    TLDL E    KL R 
Sbjct: 585  VLERLVHSVRAGPSVTEPSNRFLHQIHTQTN---DKIVLISNYTQTLDLFE----KLLRS 637

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
             K G        ++RLDG    ++RQKLV++FN+P N +    L+S++AG  GINL  AN
Sbjct: 638  KKYG--------YFRLDGTMSITKRQKLVDQFNDP-NGKEFIFLLSSKAGGCGINLIGAN 688

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+I+ D  WNP  D QA+ R WR GQ K  F YR ++ GT+EEKI++RQ +K+ L++ VV
Sbjct: 689  RLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQASKQALSSAVV 748

Query: 1281 D-RQQVHRTISKEEMLHLFEFGD 1302
            D ++   R  S + +  LF F +
Sbjct: 749  DEKEDTERHFSLDSLRQLFTFNE 771


>gi|315041194|ref|XP_003169974.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS
            118893]
 gi|311345936|gb|EFR05139.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS
            118893]
          Length = 1226

 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 177/608 (29%), Positives = 277/608 (45%), Gaps = 103/608 (16%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            ++P  I   L  +Q  G++++WE   Q +          G I+   MGLGKT QVIAFL 
Sbjct: 388  QLPGDIHPYLFDYQKTGVKWLWELYQQQV----------GGIIGDEMGLGKTIQVIAFLA 437

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRDRR 827
                S  L     ++V P  V+  W  EF +W P    P RV +L        ++  + +
Sbjct: 438  GIHYSKKLK-GPIIVVCPPTVMKQWVNEFHRWWP----PFRVSILHTSGSGMVNIKSESQ 492

Query: 828  AE---LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL------- 877
            AE       W  +      G  A R +   + ++D ++       LQ    +L       
Sbjct: 493  AEDRYTSGVWGDRNATSQRGNKAARRI-LKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGI 551

Query: 878  -VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
             V DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG+   
Sbjct: 552  AVLDEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVN 611

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFV 995
            FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  M+V   DLP K+  V
Sbjct: 612  FRNQFELPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDVAA-DLPKKSEQV 670

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +  KL+ +QR  Y+ FL     + +  S  + R+    G   L +I NHP + Q      
Sbjct: 671  LFCKLTKVQRAAYEAFL----ASGEMSSILRGRREALYGIDMLRKICNHPDLTQ------ 720

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
                         +  DYN   G K                                   
Sbjct: 721  --------HKILSQKTDYNYGSGAK----------------------------------- 737

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM ++  +L +    G K+L+F+Q    LD++E ++               G ++ R
Sbjct: 738  -SGKMQVVKSLLELWKETGHKTLLFAQHRIMLDILERFIRGF-----------DGFNYRR 785

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T    RQ +V+ FN   +  +   L++T+ G LG+NL  A+RVII D  WNP+ D+
Sbjct: 786  MDGNTPIKARQSMVDEFNN--DPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDM 843

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T    ++ 
Sbjct: 844  QARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQMSDIQ 903

Query: 1296 HLFEFGDD 1303
             LF  G+D
Sbjct: 904  DLFTLGND 911


>gi|242056785|ref|XP_002457538.1| hypothetical protein SORBIDRAFT_03g009030 [Sorghum bicolor]
 gi|241929513|gb|EES02658.1| hypothetical protein SORBIDRAFT_03g009030 [Sorghum bicolor]
          Length = 1208

 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 195/678 (28%), Positives = 294/678 (43%), Gaps = 150/678 (22%)

Query: 683  GDLSAGASIEVLGDAITGY--IVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENII 740
            GD +A  S E    A  G+  +  V+ E G   +RIP +I  +L  +Q VG++++WE   
Sbjct: 356  GDFAASVS-EEDDQAAEGFDGVSPVILEGG---LRIPGTIYEQLFDYQKVGVQWLWELHC 411

Query: 741  QSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWK 800
            Q            G I+   MGLGKT QV++FL +   S     + ++++ PV +L  W+
Sbjct: 412  QRA----------GGIIGDEMGLGKTVQVLSFLGSLHNSSM--YKPSIVICPVTLLQQWQ 459

Query: 801  QEFMKWRPSELKPLRVFMLEDVSRD------------------------RRAELLAKW-- 834
            +E  +W P      +V +L D +                          RRA+   KW  
Sbjct: 460  REASRWYPK----FKVEILHDSANGSSKKSKAYNDSDSEGSWDSDQEGVRRAKPAKKWDD 515

Query: 835  ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 888
                   +  G+ L  Y   R L       ++ +  E  +A        V DE H I+N 
Sbjct: 516  LISRVVNSGSGLLLTTYEQLRILG------EKLLDIEWGYA--------VLDEGHRIRNP 561

Query: 889  RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 948
             A+ T   KQ++   RI +TG+P+QN L E + + DFV  G LG    F   F  PI  G
Sbjct: 562  NAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFETEFSVPITVG 621

Query: 949  QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 1008
             + N+T   V    + + +L + +  ++ R     V   LP KT  V+   L+P QR  Y
Sbjct: 622  GYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPKKTEHVLFCSLTPEQRSTY 681

Query: 1009 KRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSD 1068
            + FL           N   R S + G   L +I NHP +L+         RE A      
Sbjct: 682  RAFLASSEVEQIFDGN---RNSLY-GIDVLRKICNHPDLLE---------REHAA----- 723

Query: 1069 ENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILT 1128
            +N DY    G   R                                  SGKM ++  +L 
Sbjct: 724  QNPDY----GNPER----------------------------------SGKMKVVEQVLK 745

Query: 1129 MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKL 1188
            +  + G + L+F+Q+   LD++E +L+                 + R+DG T + +R  L
Sbjct: 746  VWKDQGHRVLLFTQTQQMLDILENFLTAC------------DYQYRRMDGLTPAKQRMAL 793

Query: 1189 VERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTK 1248
            ++ FN      +   +++T+ G LG NL  ANR+II D  WNP+ D+QA  RAWR GQT+
Sbjct: 794  IDEFNN--TDEIFVFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQTR 851

Query: 1249 PVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDP 1308
             V  YRL+  GT+EEK+Y RQ+ K  L  +V+   Q  R     +M  LF   DDE    
Sbjct: 852  DVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQKRFFKARDMKDLFTLQDDE---- 907

Query: 1309 LTAVSKENGQGSSQNTNC 1326
                    G GS++ +N 
Sbjct: 908  --------GNGSTETSNI 917


>gi|402219506|gb|EJT99579.1| hypothetical protein DACRYDRAFT_109677 [Dacryopinax sp. DJM-731 SS1]
          Length = 1072

 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 174/588 (29%), Positives = 280/588 (47%), Gaps = 103/588 (17%)

Query: 712  EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ--- 768
            E V +   ++ KL+ HQ  G+ FM+E ++   R      +G G ILA  MGLGKT Q   
Sbjct: 365  EDVVVDPVLATKLRPHQREGVIFMYEAVMGMRRH-----EGFGAILADEMGLGKTLQASS 419

Query: 769  --VIAFLYTAMRSVNLGLR-----------TALIVTPVNVLHNWKQEFMKWRPSELKPLR 815
               IA L+T +R      R            A+IV PV+++ NW+ E  KW   +   + 
Sbjct: 420  NKTIALLWTLLRQTPYRPREPIYHHKGEIGKAMIVCPVSLVGNWRSEIWKWLGRDR--MG 477

Query: 816  VFMLEDVSRDRRAELLAKWRAKG-GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP 874
            VF+ E+ ++ ++        ++G  V +IGY   R++              I   +   P
Sbjct: 478  VFVAEETNKIKQF-----LNSRGHDVLIIGYEKLRSV--------------IDMLVYSDP 518

Query: 875  --DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
              D+++CDE H +K++   T+Q    +K +RRI L+G+P+QN+L E++ M +F   G LG
Sbjct: 519  MIDLIICDEGHRLKSSNNKTSQMFTALKTKRRIILSGTPIQNDLSEFWSMAEFCNPGLLG 578

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKT 992
              ++F+  ++ PI   +  N T ++ +I   RS  L    K FV R   +++   LPPK 
Sbjct: 579  QYNDFKRIYEQPIVRARAPNCTEKNKEIGEARSSQLSSTAKSFVLRRTADILTSYLPPKY 638

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA---LAQIWNHPGILQ 1049
             +V  ++ + +Q  L +R L        +     +R       +    L +I   P +L+
Sbjct: 639  EYVAFIRPTKVQIDLMQRVL------TSQAIGRALRNGMAQALEMMSILGKICTSPVLLK 692

Query: 1050 LTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEH 1109
             T     PS+   E         Y  ++   PR+M +     +D  F             
Sbjct: 693  TTAKP--PSQWAPE---------YQEIVSRLPRHMEE-----SDSSF------------- 723

Query: 1110 TYKELDYSGKMVLLLDILTMCSNMG-DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWK 1168
                   SGK++ L+++L     +  +K +V SQ   TLD++E   +K+         W 
Sbjct: 724  -------SGKLIALMNLLDAVRKITEEKVIVVSQFTKTLDVVEAICTKM--------RWT 768

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            +     RLDG T  +ER   V+ FN          L+S +AG +G+NL  A+R+I++D S
Sbjct: 769  R----ERLDGTTPQNERDSRVQTFNRTNQAECFIFLLSLKAGGVGLNLVGASRLILLDSS 824

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLA 1276
            WNP +DLQA+ R  R GQ +PV  YR +  GT++EK+Y RQV K GL 
Sbjct: 825  WNPAHDLQAMARIHRDGQKRPVHIYRFLTVGTIDEKVYMRQVIKTGLT 872


>gi|345327482|ref|XP_001506039.2| PREDICTED: hypothetical protein LOC100074424 [Ornithorhynchus
            anatinus]
          Length = 1623

 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 182/598 (30%), Positives = 300/598 (50%), Gaps = 89/598 (14%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  GI F++E ++  +R     +   G ILA  MGLGKT Q I+ ++T +R    G
Sbjct: 905  LRPHQKEGILFLFECVM-GMRV----NGRFGAILADEMGLGKTLQCISLIWTLLRQGPYG 959

Query: 784  ----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG 839
                ++  L+VTP ++++NWK+EF KW  +E   ++VF    V ++ + E   K      
Sbjct: 960  GKPIIKQTLVVTPGSLVNNWKKEFQKWLGTER--IKVF---SVDQEHKVEEFIK-SPFYS 1013

Query: 840  VFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQ 898
            V +I Y    R+L   K++ D N+              L+CDE H +KN    TT AL  
Sbjct: 1014 VLIISYEMLLRSLDQIKNI-DFNL--------------LICDEGHRLKNNSIKTTTALIS 1058

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            + C RRI LTG+P+QN+L E+Y +++FV  G LGS   +R  ++ PI   +  ++T E+ 
Sbjct: 1059 LSCDRRIILTGTPVQNDLQEFYALIEFVNPGILGSLSTYRKIYEEPIIRSREPSATREEK 1118

Query: 959  KIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD----- 1013
            ++  +R+  L      F+ R    V+ K LPPK   V+  + + LQ  LY++ L+     
Sbjct: 1119 ELGEKRAAELTRLTGLFILRRTQEVINKYLPPKIESVVFCRPAALQIELYRKLLNSRAIS 1178

Query: 1014 --LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 1071
              L G   +                AL ++ NHP +L       + + ++ E +S+ +  
Sbjct: 1179 FCLQGMLEN--------SPHLVCIGALKKLCNHPCLL-------FKAIKEKECNSTHDGF 1223

Query: 1072 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 1131
            +             +  +G  D   F  D+        T+ E+D SGK+ +L+ +L +  
Sbjct: 1224 EE-----------TNLYEGLID--VFPPDY-----SPVTFPEVD-SGKLRVLIKLLAVIR 1264

Query: 1132 NM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
             +   +K ++ S    TL +++    +             G    RLDG+T  S+RQ ++
Sbjct: 1265 ELSPSEKVVLVSNYTQTLTILQEICKRY------------GYAHTRLDGQTPISQRQHII 1312

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            + FN   +      L+S++AG +G+NL   + +I+ D  WNP  D+QA+ R WR GQ +P
Sbjct: 1313 DGFNSKHSPDF-VFLLSSKAGGVGLNLVGGSHLILYDIDWNPATDIQAMARVWRDGQKRP 1371

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEFGDDEN 1305
            V  YRL+  GT+EEKIY+RQ++K+ L+  VVD  +   H   S EE+ ++F   +D N
Sbjct: 1372 VHIYRLLTTGTIEEKIYQRQISKQSLSGTVVDLTKASEHIHFSVEELKNVFTLHEDSN 1429


>gi|119487132|ref|XP_001262421.1| DNA repair protein Rhp26/Rad26, putative [Neosartorya fischeri NRRL
            181]
 gi|119410578|gb|EAW20524.1| DNA repair protein Rhp26/Rad26, putative [Neosartorya fischeri NRRL
            181]
          Length = 1214

 Score =  238 bits (608), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 180/614 (29%), Positives = 278/614 (45%), Gaps = 106/614 (17%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +   R+P  ++  L  +Q  G++++WE   Q +          G I+   MGLGKT Q I
Sbjct: 407  DNGYRLPGDLNPYLFDYQKTGVQWLWELYQQKV----------GGIIGDEMGLGKTIQTI 456

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR------ 824
            AFL     S  L     ++V P  V+  W  EF +W P    P RV +L           
Sbjct: 457  AFLAGLHYSKKLD-GPVIVVCPATVMKQWVNEFHRWWP----PFRVSILHTSGSGMVNIR 511

Query: 825  ---DRRAELLAK-WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV-- 878
                R   LLA+ + +    F     A R +   + V++ ++       LQ     L+  
Sbjct: 512  SESSREDALLAQTYSSSSRGFTSNQKAARKV-VKRVVEEGHVLVTTYSGLQTYSHFLIPV 570

Query: 879  ------CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                   DE H I+N     T   K+++   RI L+G+P+QNNL E + + DFV    LG
Sbjct: 571  EWGCAILDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLG 630

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPK 991
            +   FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  ++V   DLP K
Sbjct: 631  TLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAA-DLPKK 689

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
            T  V+  KL+  QR  Y+ FL     + +  S  K R+    G   L +I NHP +    
Sbjct: 690  TEQVLFCKLTKPQRMAYESFLK----SEEMESILKGRRQILYGVDILRKICNHPDL---- 741

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                                             N  LQ                 H+  Y
Sbjct: 742  --------------------------------QNHKLQS----------------HQLGY 753

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
               + SGKM ++  +L +  + G K+L+F+Q    LD++E ++  L            G 
Sbjct: 754  GNANKSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILEKFVRSL-----------SGF 802

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
            +  R+DG T    RQ +V+ FN   N  +   L++T+ G LG+NL  A+RVII D  WNP
Sbjct: 803  NHRRMDGTTPIQNRQTMVDEFNNDPN--IHVFLLTTKVGGLGVNLTGADRVIIYDPDWNP 860

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTIS 1290
            + D+QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++ D +Q   +  
Sbjct: 861  STDVQARERAWRLGQKRDVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTSFQ 920

Query: 1291 KEEMLHLFEFGDDE 1304
              ++  LF  GD++
Sbjct: 921  LSDLYDLFALGDEK 934


>gi|326471229|gb|EGD95238.1| DNA repair and recombination protein RAD26 [Trichophyton tonsurans
            CBS 112818]
          Length = 1225

 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 179/608 (29%), Positives = 281/608 (46%), Gaps = 103/608 (16%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            ++P  I   L  +Q  G++++WE   Q +          G I+   MGLGKT QVIAFL 
Sbjct: 386  QLPGDIYPYLFDYQKTGVKWLWELYQQQV----------GGIIGDEMGLGKTIQVIAFLA 435

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRDRR 827
                S  L     ++V P  V+  W  EF +W P    P RV +L        ++  + +
Sbjct: 436  GIHYSKKLK-GPIIVVCPPTVMKQWVNEFHRWWP----PFRVSILHTSGSGMVNIKSESQ 490

Query: 828  AE---LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL------- 877
            AE       W  +      G  A R +   + ++D ++       LQ    +L       
Sbjct: 491  AEDRYTSGVWGDRNSTSQRGNKAARRI-LKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGI 549

Query: 878  -VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
             V DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG+   
Sbjct: 550  AVLDEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVN 609

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFV 995
            FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  M+V   DLP K+  V
Sbjct: 610  FRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDVAA-DLPKKSEQV 668

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +  KL+ +QR  Y+ FL     + +  S  + R+    G   L +I NHP    LT+ K 
Sbjct: 669  LFCKLTKVQRAAYEAFL----ASGEMSSILRGRREALYGIDMLRKICNHP---DLTQHKV 721

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
              ++            DYN   G K                                   
Sbjct: 722  LSTK-----------TDYNYGSGAK----------------------------------- 735

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM ++  +L +  + G K+L+F+Q    LD++E ++               G ++ R
Sbjct: 736  -SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGF-----------DGFNYRR 783

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T    RQ +V+ FN   +  +   L++T+ G LG+NL  A+RVII D  WNP+ D+
Sbjct: 784  MDGNTPIKVRQSMVDEFNN--DPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDV 841

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T    ++ 
Sbjct: 842  QARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQMSDIQ 901

Query: 1296 HLFEFGDD 1303
             LF  G+D
Sbjct: 902  DLFTLGND 909


>gi|148230804|ref|NP_001085120.1| RAD54 homolog B [Xenopus laevis]
 gi|47939775|gb|AAH72215.1| MGC81308 protein [Xenopus laevis]
          Length = 895

 Score =  238 bits (608), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 187/647 (28%), Positives = 310/647 (47%), Gaps = 81/647 (12%)

Query: 714  VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 773
            V +   ++  L+ HQ  GI F++E ++  +R     ++  G ILA  MGLGKT Q I+ +
Sbjct: 269  VVVDPYLAVHLRPHQKEGILFLYECVM-GMRV----NERFGAILADEMGLGKTLQCISLI 323

Query: 774  YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 829
            +T +R    G    ++ ALIVTP +++ NW++EF KW  +E   +RVF    V +D + E
Sbjct: 324  WTLLRQGPYGAKPVIKRALIVTPGSLVKNWRKEFQKWLGTER--IRVFA---VDQDHKVE 378

Query: 830  LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 889
                      V +I Y     L   + ++  +             D+++CDE H +KNT 
Sbjct: 379  EFVN-SPLYSVLIISYEML--LRCLEQIESLDF------------DLVICDEGHRLKNTS 423

Query: 890  ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 949
              TT +L  + C +RI L+G+P+QN+L E++ +++FV    LGS   +R  F+ PI   +
Sbjct: 424  IKTTTSLTSLTCSKRIILSGTPVQNDLQEFFALIEFVNPAVLGSLSTYRKVFEEPIVRSR 483

Query: 950  HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 1009
               +T E+  +  +R+  L      F+ R    V+ K LPPK   ++  + S  Q  LY+
Sbjct: 484  EPTATPEEKNLGEERAAELARLTGLFILRRTQEVINKFLPPKIENIVFCQPSQFQLDLYR 543

Query: 1010 RFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDE 1069
            R L+     +  + N +          AL ++ NHP +L  T       +E + +    E
Sbjct: 544  RLLNSRAVKSCLLGNGE-NSPHLVCIGALKKLCNHPCLLFRT------IQEKSTNPDQGE 596

Query: 1070 NMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTM 1129
            +  Y  +    P++ +     +++ G                +EL  S ++VL+      
Sbjct: 597  HSLYESIAELFPQDYDGAKISESESGKLLV----LSKLLSGIRELSPSERVVLV------ 646

Query: 1130 CSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLV 1189
                       S    TL+++            Q    + G    RLDG+T  ++RQ +V
Sbjct: 647  -----------SHYTQTLNIL------------QALCVQHGYSCTRLDGQTPVTQRQHIV 683

Query: 1190 ERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKP 1249
            + FN   +      L+S++AG +G+NL  A+ +I+ D  WNP  D+QA+ R WR GQ + 
Sbjct: 684  DGFNSKYSSDF-IFLLSSKAGGVGLNLIGASHLILYDIDWNPANDIQAMARVWRDGQRRT 742

Query: 1250 VFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHLFEFGDDENPD 1307
            V  YRL+  G++EEKIY+RQ++K+GL+  VVD  ++  H   S +E+ +LF   +D +  
Sbjct: 743  VHIYRLLTTGSLEEKIYQRQISKQGLSGAVVDLTKKSEHIRFSVDELRNLFTLHEDTD-- 800

Query: 1308 PLTAVSKENGQGSSQNTNC---ALKHKLPLSHEGCSDKLMESLLGKH 1351
                V+ E  +     TNC    L  K PL H  C  +L    L K+
Sbjct: 801  ---CVTHELLECDCIKTNCLSDGLPQK-PLIHRSCQLELHRDQLNKN 843


>gi|302652597|ref|XP_003018145.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517]
 gi|291181757|gb|EFE37500.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517]
          Length = 1240

 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 179/608 (29%), Positives = 281/608 (46%), Gaps = 103/608 (16%)

Query: 715  RIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLY 774
            ++P  I   L  +Q  G++++WE   Q +          G I+   MGLGKT QVIAFL 
Sbjct: 401  QLPGDIYPYLFDYQKTGVKWLWELYQQQV----------GGIIGDEMGLGKTIQVIAFLA 450

Query: 775  TAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLE-------DVSRDRR 827
                S  L     ++V P  V+  W  EF +W P    P RV +L        ++  + +
Sbjct: 451  GIHYSKKLK-GPIIVVCPPTVMKQWVNEFHRWWP----PFRVSILHTSGSGMVNIKSESQ 505

Query: 828  AE---LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL------- 877
            AE       W  +      G  A R +   + ++D ++       LQ    +L       
Sbjct: 506  AEDRYTSGVWGDRNSTSQRGNKAARRI-LKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGI 564

Query: 878  -VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 936
             V DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG+   
Sbjct: 565  AVLDEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVN 624

Query: 937  FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKTVFV 995
            FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  M+V   DLP K+  V
Sbjct: 625  FRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDVAA-DLPKKSEQV 683

Query: 996  ITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKG 1055
            +  KL+ +QR  Y+ FL     + +  S  + R+    G   L +I NHP    LT+ K 
Sbjct: 684  LFCKLTKVQRAAYEAFL----ASGEMSSILRGRREALYGIDMLRKICNHP---DLTQHKI 736

Query: 1056 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 1115
              ++            DYN   G K                                   
Sbjct: 737  LSTK-----------TDYNYGSGAK----------------------------------- 750

Query: 1116 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1175
             SGKM ++  +L +  + G K+L+F+Q    LD++E ++               G ++ R
Sbjct: 751  -SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGF-----------DGFNYRR 798

Query: 1176 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1235
            +DG T    RQ +V+ FN   +  +   L++T+ G LG+NL  A+RVII D  WNP+ D+
Sbjct: 799  MDGNTPIKVRQSMVDEFNN--DPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDV 856

Query: 1236 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEML 1295
            QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T    ++ 
Sbjct: 857  QARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQMSDIQ 916

Query: 1296 HLFEFGDD 1303
             LF  G+D
Sbjct: 917  DLFTLGND 924


>gi|70982085|ref|XP_746571.1| DNA repair protein Rhp26/Rad26 [Aspergillus fumigatus Af293]
 gi|66844194|gb|EAL84533.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus
            Af293]
 gi|159122195|gb|EDP47317.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus
            A1163]
          Length = 1214

 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 176/613 (28%), Positives = 275/613 (44%), Gaps = 104/613 (16%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            +   R+P  ++  L  +Q  G++++WE   Q +          G I+   MGLGKT Q I
Sbjct: 407  DNGYRLPGDLNPYLFDYQKTGVQWLWELYQQKV----------GGIIGDEMGLGKTIQAI 456

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSR------ 824
            AFL     S  L  R  ++V P  V+  W  EF +W P    P RV +L           
Sbjct: 457  AFLAGLHYSKKLD-RPVIVVCPATVMKQWVNEFHRWWP----PFRVSILHTSGSGMVNIR 511

Query: 825  ---DRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILV--- 878
                R   LL++  +     +            + V++ ++       LQ     L+   
Sbjct: 512  SESSREDALLSQTYSSNSRGITSNQKAARKVVKRVVEEGHVLVTTYSGLQTYSHFLIPVE 571

Query: 879  -----CDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 933
                  DE H I+N     T   K+++   RI L+G+P+QNNL E + + DFV    LG+
Sbjct: 572  WGCAILDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGT 631

Query: 934  SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPKT 992
               FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  ++V   DLP KT
Sbjct: 632  LVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAA-DLPKKT 690

Query: 993  VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK 1052
              V+  KL+  QR  Y+ FL     + +  S  K R+    G   L +I NH        
Sbjct: 691  EQVLFCKLTKPQRMAYESFLK----SEEMESILKGRRQILYGVDILRKICNH-------- 738

Query: 1053 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 1112
                                        P   N  +Q                 H+  Y 
Sbjct: 739  ----------------------------PDLQNHKMQS----------------HQSGYG 754

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1172
              + SGKM ++  +L +  + G K+L+F+Q    LD++E ++  L            G +
Sbjct: 755  NANKSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILEKFVRSL-----------SGFN 803

Query: 1173 WYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPT 1232
            + R+DG T    RQ +V+ FN   N  +   L++T+ G LG+NL  A+RVII D  WNP+
Sbjct: 804  YRRMDGTTPIQNRQTMVDEFNNDPN--IHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPS 861

Query: 1233 YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTISK 1291
             D+QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++ D +Q   +   
Sbjct: 862  TDVQARERAWRLGQKRDVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTSFQL 921

Query: 1292 EEMLHLFEFGDDE 1304
             ++  LF  GD++
Sbjct: 922  SDLYDLFALGDEK 934


>gi|296813433|ref|XP_002847054.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS
            113480]
 gi|238842310|gb|EEQ31972.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS
            113480]
          Length = 1233

 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 179/612 (29%), Positives = 275/612 (44%), Gaps = 107/612 (17%)

Query: 713  AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 772
              ++P  I   L  +Q  G++++WE   Q +          G I+   MGLGKT QVIAF
Sbjct: 384  GYQLPGDIYPYLFDYQKTGVKWLWELYQQQV----------GGIIGDEMGLGKTIQVIAF 433

Query: 773  LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML------------E 820
            L     S  L     ++V P  V+  W  EF  W P    P RV +L            E
Sbjct: 434  LAGLHYSKKLK-GPIIVVCPPTVMKQWVNEFHDWWP----PFRVSILHTSGIGMVNLKSE 488

Query: 821  DVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDIL--- 877
              + DR       W  +      G  A R +   + ++D ++       LQ    +L   
Sbjct: 489  SQAEDRYTS--GAWGDRNSTSQRGGKAARRI-LKRVLEDGHVLVTTYAGLQTYSSLLIPV 545

Query: 878  -----VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLG 932
                 V DE H I+N     T   K+++   R+ L+G+P+QNNL E + + DFV    LG
Sbjct: 546  DWGIAVLDEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLG 605

Query: 933  SSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKDLPPK 991
            +   FRN+F+ PI  G + N+++  V+   + +  L + +  ++ QR  M+V   DLP K
Sbjct: 606  TLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDVAA-DLPKK 664

Query: 992  TVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLT 1051
            +  V+  KL+ +QR  Y+ FL     + +  S  + R+    G   L +I NHP + Q  
Sbjct: 665  SEQVLFCKLTKVQRAAYEAFL----ASGEMSSILRGRREALYGIDMLRKICNHPDLTQ-- 718

Query: 1052 KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTY 1111
                          +     DYN   G K                               
Sbjct: 719  ------------HKTLSLKTDYNYGSGAK------------------------------- 735

Query: 1112 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGK 1171
                 SGKM ++  +L +  + G K+L+F+Q    LD++E ++    R            
Sbjct: 736  -----SGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFIRGFDR-----------F 779

Query: 1172 DWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1231
            ++ R+DG T    RQ +V+ FN   +  +   L++T+ G LG+NL  A+RVII D  WNP
Sbjct: 780  NYRRMDGNTPIKVRQTMVDEFNN--DPSLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNP 837

Query: 1232 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISK 1291
            + D+QA  RAWR GQ + V  YRLM  GT+EEKIY RQ+ K+ L  +++   +  +T   
Sbjct: 838  STDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQM 897

Query: 1292 EEMLHLFEFGDD 1303
             +M  LF  G+D
Sbjct: 898  SDMQDLFTLGND 909


>gi|156064177|ref|XP_001598010.1| hypothetical protein SS1G_00096 [Sclerotinia sclerotiorum 1980]
 gi|154690958|gb|EDN90696.1| hypothetical protein SS1G_00096 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1103

 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 184/619 (29%), Positives = 290/619 (46%), Gaps = 116/619 (18%)

Query: 711  EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 770
            E  +++P  I   L  +Q  G++++ E   Q +          G I+   MGLGKT Q+I
Sbjct: 403  ENGLKLPGDIFPALFDYQKTGVQWLSELYNQQV----------GGIIGDEMGLGKTIQII 452

Query: 771  AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAEL 830
            +FL     S  L  +  ++V P  VL  W  EF +W P+    LRV +L           
Sbjct: 453  SFLAGLHYSKKL-TKPIIVVAPATVLRQWVNEFHRWWPA----LRVSILHSSGTG----- 502

Query: 831  LAKWRAKGGV------FLIGYT---AFRNLSFGKHVKDR-----NMAREICHALQDGPDI 876
            +   R +G +       + G T   A ++    + + DR     ++       LQ   D 
Sbjct: 503  MLNVRNEGRLEDEEDDIIYGQTTKKAPKSQKLAQKIVDRVVKHGHVLVTTYAGLQTYSDT 562

Query: 877  L--------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 928
            L        V DE H I+N     T   K+++   R+ L+G+P+QN L+E + + DFV  
Sbjct: 563  LINVDWDYAVLDEGHKIRNPNTAVTIYCKELRTPNRVILSGTPMQNGLIELWSLFDFVFP 622

Query: 929  GFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMDMNVVKKD 987
              LG+   FR  F+ PI+ G + N+T+  V    + +  L + +  ++ QR+ ++V   D
Sbjct: 623  MRLGTLVNFRQSFEVPIKIGGYANATNLQVLTATKCAETLKDAISPYLLQRLKVDVAA-D 681

Query: 988  LPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSN--EKIRKSFFAGYQALAQIWNHP 1045
            LP K+  V+  KL+  QR  Y+ FL      +D + +   + R+S + G   L +I NHP
Sbjct: 682  LPKKSEQVLFCKLTRPQRDAYEMFL-----ASDEMKSILNRTRQSLY-GIDILRKICNHP 735

Query: 1046 GILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDL 1105
             +L    DK   ++ + +                                     W N  
Sbjct: 736  DLL----DKRLKTKPNYK-------------------------------------WGNG- 753

Query: 1106 LHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGK 1165
                     + SGKM ++  +L M    G K+L+FSQ +  LD++E ++ KL        
Sbjct: 754  ---------NKSGKMQVVKALLQMWKGYGHKTLLFSQGVQMLDILEEFVKKL-------- 796

Query: 1166 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1225
                G ++ R+DG T   +RQ LV++FN   N  V   L++T+ G LG+NL  ANRVII 
Sbjct: 797  ---GGFNYLRMDGGTAIKDRQTLVDQFNNDPNMHV--FLLTTKVGGLGVNLTGANRVIIF 851

Query: 1226 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 1285
            D  WNP+ D+QA  RAWR GQ K V  YRLM  GT+EEKIY RQ+ K+ L  +++   + 
Sbjct: 852  DPDWNPSTDVQARERAWRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQ 911

Query: 1286 HRTISKEEMLHLFEFGDDE 1304
             +T + +++  LF  GD +
Sbjct: 912  RQTFAMKDLYDLFTLGDQD 930


>gi|344232266|gb|EGV64145.1| hypothetical protein CANTEDRAFT_122352 [Candida tenuis ATCC 10573]
          Length = 1010

 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 171/611 (27%), Positives = 281/611 (45%), Gaps = 85/611 (13%)

Query: 709  KGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQ 768
            K ++  ++P  I   L  +Q   ++++WE   Q            G I+   MGLGKT Q
Sbjct: 250  KLDDRFKLPGDIHPSLFDYQKTCVQWLWELYNQKT----------GGIIGDEMGLGKTIQ 299

Query: 769  VIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE----LKPLRVFMLEDVSR 824
            VI+F+   +    L  +  LIV P  VL+ W  EF KW P+     L  +   M + +  
Sbjct: 300  VISFI-AGLHYSGLLEKPVLIVVPATVLNQWVNEFHKWWPALRCVILHSIGSGMGQKIDE 358

Query: 825  DRRAELLAKWRAKGGVFLIGYTAFRN--------LSFGKHVKDRNMAREIC--HALQDGP 874
            ++  + L +     G    G     N        +  G  +    +   I   H L    
Sbjct: 359  NKLEQFLQQEEGATGKVFKGVRTQINAQQVVNSVMESGHVLITTYVGLRIYSKHLLTKSW 418

Query: 875  DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 934
               V DE H I+N  ++ +   K+VK   RI L+G+P+QNNL+E + + DFV  G LG+ 
Sbjct: 419  GYCVLDEGHKIRNPNSEISLLCKRVKTANRIILSGTPIQNNLIELWSLFDFVFPGRLGTL 478

Query: 935  HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 994
              F  +F  PI  G + N+++  V+   + + IL + +  ++ R   + V +DLP K   
Sbjct: 479  PVFEQQFSLPINMGGYANASNLQVQTSYKCATILRDLISPYLLRRLKHDVARDLPKKEEM 538

Query: 995  VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK 1054
            V+ VKL+  Q+++Y+ FL+    + D  +  K +++   G   L +I NHP ++      
Sbjct: 539  VLFVKLTHYQQQMYESFLE----SEDLRAIMKGKRNMLMGVDVLRKICNHPDLVN----- 589

Query: 1055 GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKEL 1114
            G  S ED  +S                                                 
Sbjct: 590  GNKSSEDYGNSKR----------------------------------------------- 602

Query: 1115 DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY 1174
              SGKM +   ++ + +    K L+F Q+   LD++E +L ++ +         +  ++ 
Sbjct: 603  --SGKMEVTRKLIQLWALHNHKMLIFCQTRQMLDILERFLHRITKIDGNNMETGEPFEYL 660

Query: 1175 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1234
            R+DG T   +RQ LV+RFN   + ++   L++T+ G LGINL  A+R+II D  WNP+ D
Sbjct: 661  RMDGTTPIGKRQYLVDRFNT--DPKISVFLLTTKVGGLGINLTGADRIIIYDPDWNPSTD 718

Query: 1235 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1294
            +QA  RAWR GQ + +  YRLM  G++EEKIY RQ+ K  L  +++   +  R     ++
Sbjct: 719  MQARERAWRLGQKRDIVIYRLMITGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFKMNDL 778

Query: 1295 LHLFEFGDDEN 1305
              LF  GD ++
Sbjct: 779  HDLFSLGDQDD 789


>gi|440638315|gb|ELR08234.1| DNA repair and recombination protein RAD54 and RAD54-like protein
            [Geomyces destructans 20631-21]
          Length = 810

 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 182/621 (29%), Positives = 295/621 (47%), Gaps = 95/621 (15%)

Query: 698  ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 757
            I G    V  E+ +  V I   ++  L+ HQ+ G++FM++ +   I      D+  GCI+
Sbjct: 195  ILGIKKKVEGERPKVPVVIDPRLAKVLRPHQIEGVKFMYKCVTGMI-----DDRANGCIM 249

Query: 758  AHTMGLGKTFQVIAFLYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWR-PSELK 812
            A  MGLGKT Q I  ++T ++ S + G   ++  +I  P +++ NW  E +KW     + 
Sbjct: 250  ADEMGLGKTLQCITLMWTLLKQSTDAGKPTIQKVIIACPSSLVQNWANELVKWLGKGAIV 309

Query: 813  PLRVFMLE-DVSRDRRAELLAKWRAKGG------VFLIGYTAFR-NLSFGKHVKDRNMAR 864
            P   F ++   S++   + L +W    G      V ++ Y   R N+     +K+  +  
Sbjct: 310  P---FAIDGKASKEELTQQLRQWAIASGRAVTRPVIIVSYETLRLNVD---ELKNTQIG- 362

Query: 865  EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 924
                       +++CDE H +KN  + T  AL  +   RR+ L+G+P+QN+L EY+ +V 
Sbjct: 363  -----------LMLCDEGHRLKNGDSQTFTALNNLNVSRRVILSGTPIQNDLSEYFSLVS 411

Query: 925  FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 984
            F     LG+  EFR +++ PI  G+    T +D +  +     L   +  F+ R   +++
Sbjct: 412  FANPDLLGTRLEFRKKYELPILKGRDAAGTDKDRERGDDCLRELLGVVNKFIIRRTNDIL 471

Query: 985  KKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFAGYQALAQI 1041
             K LP K   V+   L+P Q  LY  F+   ++      + S              L ++
Sbjct: 472  SKYLPVKYEHVVFCGLAPFQLDLYNYFITSPEIKALLRGKGSQP------LKAIGMLKKL 525

Query: 1042 WNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDW 1101
             NHP +L L+ D     +   ED                P++     +G++ D    K W
Sbjct: 526  CNHPDLLNLSDDLPGCEQYFPEDYV--------------PKDA----RGRDRD---VKPW 564

Query: 1102 WNDLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1160
                          YSGKM +L  +L  +  +  DK ++ S    TLD+ +    KL R 
Sbjct: 565  --------------YSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDIFD----KLCRS 606

Query: 1161 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1220
               G L        RLDG    S+RQKLV++FN+P        L+S++AG  G+NL  AN
Sbjct: 607  RGYGSL--------RLDGTMNVSKRQKLVDKFNDPDGPEF-VFLLSSKAGGCGLNLIGAN 657

Query: 1221 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 1280
            R+++ D  WNP  D QA+ R WR GQ K  F YR +A GT+EEKI++RQ  K+ L++ VV
Sbjct: 658  RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVV 717

Query: 1281 DR-QQVHRTISKEEMLHLFEF 1300
            D  + V R  + + +  LF++
Sbjct: 718  DSAEDVERHFTLDSLRELFQY 738


>gi|225681829|gb|EEH20113.1| DNA repair and recombination protein RAD26 [Paracoccidioides
            brasiliensis Pb03]
          Length = 1000

 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 174/583 (29%), Positives = 276/583 (47%), Gaps = 81/583 (13%)

Query: 724  LKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNLG 783
            L+ HQ  G+RF++E ++  +R       G G ILA  MGLGKT Q IA ++T ++   + 
Sbjct: 331  LREHQREGVRFLYECVM-GMRSFN----GEGAILADEMGLGKTLQTIALIWTLLKQNPIY 385

Query: 784  -----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKG 838
                 ++ ALIV PV ++ NWK+EF KW  +E   + VF + D  R R  +         
Sbjct: 386  EAPPVIKKALIVCPVTLIDNWKKEFRKWLGNER--IGVF-VADAKRTRLTDFTMGQSYS- 441

Query: 839  GVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQ 898
             V +IGY   R +             E+      G DI++ DE H ++  +  + QA++ 
Sbjct: 442  -VMIIGYERLRTVQ-----------EELSKG--SGIDIVIADEGHRMRTVQNKSAQAIQT 487

Query: 899  VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDV 958
            +   +R+ L+G+P+QN+L E++ MVDFV  G LG+   F  +F+ PI   Q   +   D+
Sbjct: 488  LNTSKRVILSGTPIQNDLTEFFAMVDFVNPGILGTFKMFMKQFEGPIVKSQQPGALKRDI 547

Query: 959  KIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFT 1018
            +    RS  L      F+ R   +++   LPPKT +V+    +  Q  +Y+  L    F 
Sbjct: 548  EKGKARSEELASLTSLFILRRTADLLSNYLPPKTEYVLFCNPTSSQANIYRHVLSSPVFQ 607

Query: 1019 NDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIG 1078
                +++    S       L ++ N P +L        P   D EDS+S      + ++ 
Sbjct: 608  CALGNSD----SALQLITILKKLCNSPSLLN-------PKSSD-EDSTS----TLSSLVA 651

Query: 1079 EKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKS 1137
              P ++   L   +                        SGK+ +L  +L  +     +K 
Sbjct: 652  SLPSSITRRLTPAS------------------------SGKIRVLDQLLHNIRHTTSEKV 687

Query: 1138 LVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLN 1197
            ++ S    TLDL+   L+ L  P            + RLDG T +++RQ LV+ FN    
Sbjct: 688  VLISNYTSTLDLLGKLLTSLSLP------------FLRLDGSTPAAKRQALVDDFNRSSP 735

Query: 1198 KRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMA 1257
              V   L+S +AG  G+NL  A+R+++ D  WNP  D+QA+ R  R GQ +    YR + 
Sbjct: 736  TSVFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDMQAMARIHRDGQKRHCRIYRFLL 795

Query: 1258 HGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEF 1300
             G +EEKI++RQVTK GLA  V+D++      S+EE+  LF  
Sbjct: 796  KGALEEKIWQRQVTKIGLADSVMDQKSGVLQFSREELRDLFRL 838


>gi|156082193|ref|XP_001608585.1| DNA repair protein rhp54 [Plasmodium vivax Sal-1]
 gi|148801524|gb|EDL42923.1| DNA repair protein rhp54, putative [Plasmodium vivax]
          Length = 1064

 Score =  238 bits (607), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 183/661 (27%), Positives = 310/661 (46%), Gaps = 76/661 (11%)

Query: 675  LMNSVTLDGDLSAGASIEVLGDAITGYIVNVVREKGEEA-VRIPSSISAKLKAHQVVGIR 733
            + NS+    D  A AS +   D I    V ++  + E + V +   ++  L+ HQ  G+ 
Sbjct: 78   MKNSIPRRSD-EAEASEQNKADEIKNEFVPLILYESENSKVEVDPILAQFLREHQREGVT 136

Query: 734  FMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS---VNLGLRTALIV 790
            F++E ++ ++R     D+  GCILA  MGLGKT Q I+ LYT ++        +R  LI+
Sbjct: 137  FVFECLM-NLR----DDRISGCILADDMGLGKTLQSISVLYTLLKQGIDKKPAVRRCLIL 191

Query: 791  TPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLA--KWRAKGGVFLIGYTAF 848
             P ++++NW  E  KW P       V  + D ++++    L   K+  K  V +  Y  F
Sbjct: 192  CPASLINNWNDEINKWLPGRCN---VTCVNDNAKEKIVSKLEGFKYDQKSTVIICSYECF 248

Query: 849  R--NLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIA 906
            R  N S  K                   D+++CDEAH +KN +  T  ++ ++  ++R+ 
Sbjct: 249  RINNDSLDKS----------------SIDMIICDEAHRLKNDKTKTYMSIYKLAARKRLL 292

Query: 907  LTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSH 966
            L+G+P+QN+L E++ ++          ++ FR ++ NPI  G+  ++T ++ ++ ++R  
Sbjct: 293  LSGTPIQNDLSEFFALISLCNPDLFDDTNSFRKKYANPILIGRDKDATEKEQEVASERLA 352

Query: 967  ILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEK 1026
             L      F+ R   N++ K LP K +  I +KL+P+Q  LY  FL       +  S  K
Sbjct: 353  ELSTITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYVLFLKDKRILKNEQSTNK 412

Query: 1027 IRKSFFAGYQALAQIWNHPGILQLT--KDKGYPSREDAEDSSSDENMDYNVVIGEKP-RN 1083
            +  +     + L +I NHP +L     KD G+ S     + ++ ++        EK  R 
Sbjct: 413  V--NVLINIKKLEKICNHPLLLNPNDMKDVGHVSLAKLIEDAAKQHQGKRQAKQEKAERT 470

Query: 1084 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY----------------------SGKMV 1121
                L+G       +              E+DY                      S K  
Sbjct: 471  EKPPLEGHPQGDRDRDRDRERDRDRRRAVEMDYDKPVKKLLEECRRDTHRCYYNMSCKFQ 530

Query: 1122 LLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT 1180
            LL  +L T+  N  DK ++ S    TLD +E    +          +K    + RLDG  
Sbjct: 531  LLHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCKE--------NFYK----FVRLDGGI 578

Query: 1181 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 1240
               +R K++  F    +  +   L+S+++G  GINL S+NR+I++D  WNP  D QA+ R
Sbjct: 579  SIKKRHKVISDFTH--SSDIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALAR 636

Query: 1241 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHR-TISKEEMLHLFE 1299
             WR GQ K  + YRL   GT++EK+Y+RQ++K+GL++ +V      +  +S E +  LF 
Sbjct: 637  VWREGQKKICYIYRLFCTGTIDEKVYQRQISKDGLSSMIVTNTNFSKDQLSDENVKKLFN 696

Query: 1300 F 1300
            +
Sbjct: 697  Y 697


>gi|449669711|ref|XP_002158846.2| PREDICTED: helicase ARIP4-like [Hydra magnipapillata]
          Length = 754

 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/371 (38%), Positives = 205/371 (55%), Gaps = 43/371 (11%)

Query: 955  SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 1014
            ++D  +M QR+H+LY  LKGFVQR   NV+K  LPPK   V+ ++LSP+Q+ LYK+ +D 
Sbjct: 2    AKDKHLMRQRAHVLYSLLKGFVQRRGHNVLKTALPPKEENVLVIRLSPVQKALYKKLID- 60

Query: 1015 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE-----DAEDSSSDE 1069
                   +  E +       +    +IWNHP IL          ++     D +D + D+
Sbjct: 61   -----TTLCYESMNP--IKTFSLCVKIWNHPDILYKAVCANQQGKQLEILCDEDDIAVDD 113

Query: 1070 NMDYNVVIGEKPRN---------------MNDFLQGKNDDGFFQKDWWNDLLHEHTY--K 1112
            ++    V   KP +               M D LQ  +        W   L + + Y   
Sbjct: 114  SIKMKRV--NKPTHESINKLNEENKISSAMEDILQNLSS-------WAGPLFNSYMYVPG 164

Query: 1113 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPG----KQGKLWK 1168
            +L+ SGK ++L  I+      GDK L+FSQS+ TL+ IE +L  +P       ++   WK
Sbjct: 165  KLENSGKFLVLNKIIQESMARGDKMLIFSQSLLTLNSIEEFLQNIPIKNGSDHEKKYCWK 224

Query: 1169 KGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 1228
            KG+D++RLDG T + ER+KL+  FN   NK     L+STRAG LGINL +ANRV++ D S
Sbjct: 225  KGRDYFRLDGSTSTLEREKLIRLFNSKDNKHTNIFLLSTRAGCLGINLIAANRVVVFDVS 284

Query: 1229 WNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRT 1288
            WNP +D QA+ R +RYGQ KP   YRL+A  TME+KIY RQ++K+G++ RVVD Q +   
Sbjct: 285  WNPCHDAQAVCRVYRYGQEKPCHIYRLVASNTMEKKIYYRQISKQGISDRVVDEQSLTEN 344

Query: 1289 ISKEEMLHLFE 1299
             SK E+  L E
Sbjct: 345  FSKREIQSLVE 355


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.131    0.381 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,149,499,506
Number of Sequences: 23463169
Number of extensions: 918467923
Number of successful extensions: 2961953
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13216
Number of HSP's successfully gapped in prelim test: 4111
Number of HSP's that attempted gapping in prelim test: 2850090
Number of HSP's gapped (non-prelim): 70548
length of query: 1360
length of database: 8,064,228,071
effective HSP length: 155
effective length of query: 1205
effective length of database: 8,722,404,172
effective search space: 10510497027260
effective search space used: 10510497027260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 84 (37.0 bits)