Your job contains 1 sequence.
>000673
MKCRSVACIWSGTPPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLC
GHSAPIADLSICYPAMVSRDGKAEHWKAENSSNVMGKSSLDNGALISACTDGVLCVWSRS
SGHCRRRRKLPPWVGSPSVICTLPSNPRYVCIGCCFIDTNQLSDHHSFESVEGDLVSEDK
EVPMKNPPKCTLVIVDTYGLTIVQTVFHGNLSIGPWKFMDVVSLGEDMGKHYGLMVDSVG
RLQLVPISKESHLDREEGNGLCKSSSQLDMAILQNGVVEGGHLVSVATCGNIIALVLKDH
CIFRLLGSGSTIGEICFVDNLFCLEGGSTNSYVIGAMFLERVVAEKIENTMGVCTTFYEN
FAVWDNRGSAIVYAISYMNEKFDYEPHFEIPAVSYPSGVKFSIHFIQMSLYLLRMETVCF
HVEETSQWRPYISVWSLSQKHSGPGKQCRMVGEGFSFVDWVNNSTFLDENEGSCTGKSDL
TFCQDTVPRSEHVDSRQAGDGRDDFVHKEKIVSSSMVISESFYAPYAIVYGFFSGEIEVI
QFDLFERHNSPGASLKVNSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMD
CSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLETLR
VERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGARERVLRGTAS
HSMFDHFCKGISMNSISGSVLNGNTSVSSLLLPIHEDGTFRQSQIQNDERGVAFSTISEP
SASHVRKGNSGKPSLNTRIGLQRKKQTIKCSCPYPGIATLSFDLASLMFPYQMHESAAKN
GDKQENFTTMEHGTETAGPNAMTAADGSNGHSMSTDTIEEHTWIKSLEECILRFSLSFLH
LWNVDRELDKLLITEMKLKRPENFIVASGLQGEKGSLTLTFPGLKAGLELWKSSSEFCAM
RSLTMVSLAQRMISLFHPSSAASSALAAFYTRNFAENFPDIKPPLLQLLVSFWQDESEHV
RMAARSLFHCAASRAIPLPLCSPKGVADAKPVWSLSTTGDDEHANSNVEKISANELASDM
LPETQGNSLVEESDVLSWLESFEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPT
LAMLVVQPLIKLVMATNEKYSSTAAELLAEGMESTWKTCIGFEIPRLIGDIFFQIECVSN
SSANLAGQHPAVPASIRETLVGILLPSLAMADILGFLTVVESQIWSTASDSPVHLVSIMT
IIRVVRGSPRNVAQHLDKVVNFILQTMDPGNSVMRKTCLHTSMAALKEIVHVFPMVSLND
TSTKLAVGDAIGDIKKASIRVYDMQRYQNLLNLLNWVQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000673
(1358 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2128288 - symbol:AT4G11270 "AT4G11270" species... 2805 0. 2
DICTYBASE|DDB_G0272771 - symbol:wdr7 "WD40 repeat-contain... 176 1.6e-26 5
MGI|MGI:1860197 - symbol:Wdr7 "WD repeat domain 7" specie... 149 6.1e-17 6
FB|FBgn0023510 - symbol:Rbcn-3B "Rabconnectin-3B" species... 167 2.9e-16 5
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 139 1.5e-05 1
MGI|MGI:1858197 - symbol:Plrg1 "pleiotropic regulator 1, ... 139 1.5e-05 1
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 139 1.6e-05 1
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 139 1.6e-05 1
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 139 1.6e-05 1
SGD|S000006072 - symbol:PRP46 "Member of the NineTeen Com... 135 3.4e-05 1
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 133 7.0e-05 1
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 131 0.00010 1
WB|WBGene00006481 - symbol:plrg-1 species:6239 "Caenorhab... 131 0.00011 1
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 126 0.00036 1
>TAIR|locus:2128288 [details] [associations]
symbol:AT4G11270 "AT4G11270" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006486 "protein glycosylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR016024 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 EMBL:CP002687 EMBL:AL096882
EMBL:AL161531 SUPFAM:SSF48371 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998
IPI:IPI00539946 PIR:T13018 RefSeq:NP_192866.1 UniGene:At.33577
ProteinModelPortal:Q9SUT4 SMR:Q9SUT4 PRIDE:Q9SUT4
EnsemblPlants:AT4G11270.1 GeneID:826729 KEGG:ath:AT4G11270
TAIR:At4g11270 HOGENOM:HOG000153543 InParanoid:Q9SUT4 OMA:DIFFQIE
PhylomeDB:Q9SUT4 ProtClustDB:CLSN2686087 Genevestigator:Q9SUT4
Uniprot:Q9SUT4
Length = 1446
Score = 2805 (992.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 598/1091 (54%), Positives = 750/1091 (68%)
Query: 263 KSSSQLDMAILQNGVVEGGHLVSVATCGNIIALVLKDHCIFRLLGSGSTIGEICFVDNLF 322
KS + +N + EG VSV T G+++A K C+F LL IGEI FVD
Sbjct: 235 KSEPSKGSLVSRNWLSEGEIAVSVITRGDLVAFFSKSRCVFWLLNREEAIGEISFVD--- 291
Query: 323 CLEGGSTNSYVIGAMFLERVVAEKIENTMGVCTTFYENFAVWDNRGSAIVYAISYMNEKF 382
+ S+N AM L + IE + E F +WD GSA+++ +SY++ +F
Sbjct: 292 --DSHSSNFLFKEAMILYSSTST-IEGDKD--DSISETFVLWDGSGSAVLFTMSYIDGEF 346
Query: 383 DYEPHFEI-PAVSYPSGVKFSIHFIQMSLYLLRMETVCFHVEETSQWRPYISVWSLSQKH 441
Y+ EI A VK + F+Q+ LLR+E+ C VE+ SQWRP+I++WSL +
Sbjct: 347 TYKNFGEIVTAPDDKRSVKSTFCFVQLRQNLLRVESSCCDVEQPSQWRPHITIWSLCLGN 406
Query: 442 SGPGK--QCRMVGEGFSFVDWVNNSTFLDENEGSCTGKSDLTFCQDTVPRSEHVDSRQAG 499
G K Q +++GE F DW+++S LD +GS + ++ + + S +
Sbjct: 407 -GKEKELQRKVLGESSYFADWISSSC-LDP-KGSVSAETGTSQSGSQCSAKNDLQSFVSD 463
Query: 500 DGRDDFVHKEKIVSSSMVISESFYAPYAIVYGFFSGEIEVIQFDLFERHNSPGASLKVNS 559
+G+ VSSSMVISE+ Y PYA+VYGFFSGEIE+ +FD +SP +S + ++
Sbjct: 464 NGQ--------CVSSSMVISENMYVPYAVVYGFFSGEIEIAKFDFLHGIDSPASSPRSDT 515
Query: 560 H--VSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVM 617
V +Q LGHTG+VLCLAAHRM G A G + + VL+SGSMDC+IRIWDL SGN+I +M
Sbjct: 516 DPLVYKQRLLGHTGSVLCLAAHRMFGDANGCNSSHVLISGSMDCTIRIWDLESGNVIMIM 575
Query: 618 HHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVW 677
HHHVAPVRQIILSP T+ PWS CFLSVG+D VAL+SLETLRVERMFPGHPNYP KVVW
Sbjct: 576 HHHVAPVRQIILSPAPTKRPWSKCFLSVGDDSCVALSSLETLRVERMFPGHPNYPTKVVW 635
Query: 678 DCPRGYIACLCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSIS 737
D RGYIACL R SR SD +DVL+IWDVKTGARERVL G ASHSMFDHFC GIS S S
Sbjct: 636 DGTRGYIACLFRSLSRKSDPIDVLYIWDVKTGARERVLHGAASHSMFDHFCAGISEKSHS 695
Query: 738 GSVLNGNTSVSSLLLPIHEDGTFRQSQIQNDERGVAFSTISEPSASH--VRKGNSGKPSL 795
G+VLNGNTSVSSLL P+ E+ + ++N ER + ST S+PS+S R+ +S S
Sbjct: 696 GTVLNGNTSVSSLLFPVDEER--KPFYLKNYERAASLST-SKPSSSQEKTREESSTASSF 752
Query: 796 NTRIGLQRKKQTIKCSCPYPGIATLSFDLASLMFPYQMHESAAKNGDKQENFTTMEHGTE 855
I + +IKC+CP+PGI+TL FDL+SL Q HE + D + +E ++
Sbjct: 753 LQSI----RYPSIKCTCPFPGISTLIFDLSSLAVYCQTHEDS----DMHK---MLEEKSD 801
Query: 856 TAGPNAMTAADGSNGHSMSTDTIEEHTWIKSLEECILRFSLSFLHLWNVDRELDKLLITE 915
A T+ D S + E K++ E ++RFSLSFLHLW +D ELD++L+
Sbjct: 802 KATAQQKTSKDKSPVQKTLDNHAEVVHMDKAIGEYLIRFSLSFLHLWGIDFELDQMLVAH 861
Query: 916 MKLKRPENFIVASGLQGEKGSLTLTFPGLKAGLELWKSSSEFCAMRSLTMVSLAQRMISL 975
+KLKRPE+FIV SGLQG+KGSLTL FPGL A LELWKSSSEF A+RS+ MVSLAQ MISL
Sbjct: 862 LKLKRPESFIVTSGLQGDKGSLTLAFPGLNATLELWKSSSEFTALRSVIMVSLAQCMISL 921
Query: 976 FHPXXXXXXXXXXFYTRNFAENFPDIKPPLLQLLVSFWQDESEHVRMAARSLFHCAASRA 1035
H FYTRN AE +PD+KPPLLQLLV+FWQD SE VRMAARSLFH AS A
Sbjct: 922 SHSTATYSSNLAAFYTRNLAEKYPDLKPPLLQLLVTFWQDNSEQVRMAARSLFHHTASLA 981
Query: 1036 IPLPLCSPKGVADAKPVWSLSTTGDDE-HANSNVEKISANELASDMLPETQGNSLVEESD 1094
IPLPLCS A+ V SLS +E S E+ N L S+ + + Q S EES+
Sbjct: 982 IPLPLCSDHASEHAELVRSLSGISLNEPKVLSTGEEYPTNSLDSEHIHQAQRLSQAEESE 1041
Query: 1095 VLSWLESFEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPTLAMLVVQPLIKLVM 1154
+LSWLESFE+QDWISCVGGTSQDAM +HIIVAAAL+IWYPSLVKP LAMLVV L+ LVM
Sbjct: 1042 ILSWLESFEMQDWISCVGGTSQDAMAAHIIVAAALSIWYPSLVKPGLAMLVVHKLLNLVM 1101
Query: 1155 ATNEKYSSTAAELLAEGMESTWKTCIGFEIPRLIGDIFFQIECVSNSSANLAGQHPAVPA 1214
A +EKYSSTAAELL+EGME+TWKT IG +IPR++ DIFFQIECVS+S G + VP+
Sbjct: 1102 AMSEKYSSTAAELLSEGMETTWKTWIGPDIPRIVSDIFFQIECVSSS----VGAYQVVPS 1157
Query: 1215 SIRETLVGILLPSLAMADILGFLTVVESQIWSTASDSPVHLVSIMTIIRVVRGSPRNVAQ 1274
SI+ETLV +LLPSLAMAD+LGFL+++ESQIWSTASDSPVH+VS+ T+IR++R +PRN+
Sbjct: 1158 SIKETLVEVLLPSLAMADVLGFLSIIESQIWSTASDSPVHVVSLRTLIRIIRAAPRNLVL 1217
Query: 1275 HLDKVVNFILQTMDPGNSVMRKTCLHTSMAALKEIVHVFPMVSLNDTSTKLAVGDAIGDI 1334
HL+K VNF+LQTMDP N+VMRKTCL TSMA L+E+V VFPMV LND+ST+LA+GD I +I
Sbjct: 1218 HLEKAVNFVLQTMDPSNTVMRKTCLQTSMATLREVVRVFPMVILNDSSTRLAIGDVITEI 1277
Query: 1335 KKASIRVYDMQ 1345
A I +YDM+
Sbjct: 1278 NNACIHIYDMR 1288
Score = 669 (240.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 139/235 (59%), Positives = 165/235 (70%)
Query: 1 MKCRSVACIWSGTPPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYS--------- 51
MKCRSVAC+WS PPSHRVTAT++LT PPTLYTGGSDGSI+WWS S SS S
Sbjct: 1 MKCRSVACLWSRAPPSHRVTATASLTNPPTLYTGGSDGSIIWWSISSSSESNSVTRLPHH 60
Query: 52 EIKPVAMLCGHSAPIADLSICYPAMVSRDGKAEHWKAENSSNVMGKSSLDNGALISACTD 111
EIKP+AMLCGH++PI DL+IC P ++S +G A ++ N ++ ALISACTD
Sbjct: 61 EIKPIAMLCGHTSPIVDLAICDPTILSSNGVV----ASDNGNA--DPFVNCCALISACTD 114
Query: 112 GVLCVWSRSSGHCRRRRKLPPWVGSPSVICTLPSNPRYVCIGCCFIDTNQLSDHHSFESV 171
GVLCVWSRSSG CR+RRKLPPWVGSPS++ TLPS PRYVC+GC +ID V
Sbjct: 115 GVLCVWSRSSGQCRKRRKLPPWVGSPSILSTLPSEPRYVCVGCSYID------------V 162
Query: 172 EGDLVSEDKEVPMKNPPKCTLVIVDTYGLTIVQTVFHGNLSIGPWKFMDVVSLGE 226
+G D + K+ +CT+V+VDTY LTIV TVFHGNLSIG FM VV L E
Sbjct: 163 DGAETLADTDF-QKS--RCTVVVVDTYTLTIVHTVFHGNLSIGCLNFMGVVQLDE 214
Score = 240 (89.5 bits), Expect = 5.8e-315, Sum P(2) = 5.8e-315
Identities = 63/132 (47%), Positives = 76/132 (57%)
Query: 189 KCTLVIVDTYGLTIVQTVFHGNLSIGPWKFMDVVSLGEDMGKHYGLMVDSVGRLQLVPIS 248
+CT+V+VDTY LTIV TVFHGNLSIG FM VV L E LM DS GRLQLV +S
Sbjct: 177 RCTVVVVDTYTLTIVHTVFHGNLSIGCLNFMGVVQLDEQESL---LMADSFGRLQLVSVS 233
Query: 249 KESHLDREEGNGLCKSSSQLDMAILQNGVVEGGHLVSVATCGNIIALVLKDHCIFRLLGS 308
++S E G S +N + EG VSV T G+++A K C+F LL
Sbjct: 234 EKS----EPSKGSLVS---------RNWLSEGEIAVSVITRGDLVAFFSKSRCVFWLLNR 280
Query: 309 GSTIGEICFVDN 320
IGEI FVD+
Sbjct: 281 EEAIGEISFVDD 292
>DICTYBASE|DDB_G0272771 [details] [associations]
symbol:wdr7 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR016024 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0272771 SUPFAM:SSF48371
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GenomeReviews:CM000151_GR
EMBL:AAFI02000008 RefSeq:XP_644959.1 ProteinModelPortal:Q86L37
EnsemblProtists:DDB0233984 GeneID:8618637 KEGG:ddi:DDB_G0272771
InParanoid:Q86L37 OMA:GHENPIT ProtClustDB:CLSZ2729235
Uniprot:Q86L37
Length = 1342
Score = 176 (67.0 bits), Expect = 1.6e-26, Sum P(5) = 1.6e-26
Identities = 43/146 (29%), Positives = 73/146 (50%)
Query: 581 MVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQIILSPPQTEHPWSD 640
++ + G +L S S DC+I++WDL + L+ HH PV I S PQ+ +
Sbjct: 593 LMSSPPGTGLRRLLFSASNDCTIKVWDLSTFKLLHTFSHHTGPVYSIF-SLPQSSR--RN 649
Query: 641 CFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACLCRDHSRTSDAVDV 700
F+S+ ED ++ + S+E L + MF H + +KV W +GY+ D S
Sbjct: 650 TFISISEDKTIGMYSMEDLSCKHMFGVHSSSISKVHWKNEQGYLMVETIDGS-------- 701
Query: 701 LFIWDVKTGARERVLRGTASHSMFDH 726
+ IW++ +G E V+ G + + D+
Sbjct: 702 VSIWEMGSGELEGVVYGQIAKDILDN 727
Score = 129 (50.5 bits), Expect = 1.6e-26, Sum P(5) = 1.6e-26
Identities = 31/119 (26%), Positives = 66/119 (55%)
Query: 1236 FLTVVESQIWSTASDSPVHLVSIMTIIRVVRGSPRNVAQHLDKVVNFILQTMDPGNSVMR 1295
F+ V+ +I S + + + I+ I +++ P +V L +V++ I++++DP V+R
Sbjct: 1099 FIQVIGDEISSENTSTTCRVHGIVLIGSLIKKDPDSVLPFLPRVIDSIIKSLDPHTPVLR 1158
Query: 1296 KTCLHTSMAALKEIVHVFPMVSLNDTSTKLAVGDAIG-----DIKKASIRVYDMQRYQN 1349
+ C+ + A L +V+ +PMVS + + +L +G G D+K A+ R + + ++N
Sbjct: 1159 EACIRQTTAVLHLMVNKYPMVSFHHDTQRLVLGTLDGLVVIYDLKTAT-RWHRFESFKN 1216
Score = 116 (45.9 bits), Expect = 1.6e-26, Sum P(5) = 1.6e-26
Identities = 36/151 (23%), Positives = 68/151 (45%)
Query: 885 KSLEECILRFSLSFLHLWNVDRELDKLLITEMKLKRPE-NFIVASGLQGEKGSLTLTFPG 943
K L + + FS +L W +D+ LD L + + +L+ P+ +F + GL G G+++ P
Sbjct: 827 KDLNQLVSIFS--YLIPWGMDKALDILYMKDFQLRPPQPDF--SFGLLGHGGNMSFLTPS 882
Query: 944 LKAGLELWKSSSEFCAMRSLTMVSLAQRMISLFHPXXXXXXXXXXFYTRNFAENFPDIKP 1003
+ + S A +L+ V+L + ++ + +Y E
Sbjct: 883 VSFSTGKLQCSETLTAQTTLSAVALGRTILRI-GGMENTVSQLTTYYCTTLPETLQGYVY 941
Query: 1004 PLLQLLVSFWQDESEHVRMAARSLFHCAASR 1034
P L ++ QD +E V ++ARS+F + R
Sbjct: 942 PDFSYLATYCQDGNEDVMISARSIFKISIER 972
Score = 68 (29.0 bits), Expect = 1.6e-26, Sum P(5) = 1.6e-26
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 9 IWSGTPPSHRVTATSALTQPPTLYTGGSDGSILWWSFS--DSSYSEIKPVAMLCGHSAPI 66
+W G+P SH +T+ T+ +G G I S S ++ P + GH PI
Sbjct: 80 LWCGSP-SHWITSIIITPDKKTIISGSQSGHIAITSISLDQGKENQFTPKILGIGHENPI 138
Query: 67 ADLSI 71
L++
Sbjct: 139 TCLAL 143
Score = 65 (27.9 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 32/165 (19%), Positives = 72/165 (43%)
Query: 556 KVNSHVSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGN-LI 614
K N + +GH + CLA +G + EV++S + D S+ +W + G L+
Sbjct: 121 KENQFTPKILGIGHENPITCLA----LGE---FERKEVVISAASDGSMSVWSIMDGLCLL 173
Query: 615 TVMHHHVAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAK 674
+ + H ++ ++S P + + C G ++ + + + +LR+ H ++
Sbjct: 174 STVSHFLSCSPTQMVSLPNRKQV-AVC--GKGSNY-IYIVDIHSLRIVSTINDHMDWVTS 229
Query: 675 VVWDCPRGYIACLCRDHSRT--SDAVD-VLFIWDVKTGARERVLR 716
+ +C +D + S +D ++ W +K G ++ L+
Sbjct: 230 L--------FSCTMQDSTSMLLSGGLDGIIRFWLLKPGDQDMALQ 266
Score = 57 (25.1 bits), Expect = 1.6e-26, Sum P(5) = 1.6e-26
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 105 LISACTDGVLCVWSRSSGHCRRRRKLPPWVGSPSVICTLPSNPRYVCIGCCFIDTNQLS- 163
+ISA +DG + VWS G C SP+ + +LP N + V + C +N +
Sbjct: 152 VISAASDGSMSVWSIMDGLCLLSTVSHFLSCSPTQMVSLP-NRKQVAV--CGKGSNYIYI 208
Query: 164 -DHHSFESV 171
D HS V
Sbjct: 209 VDIHSLRIV 217
Score = 57 (25.1 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 871 HSMS-TDTIEEHT-WIKSLEECILRFSLSFLHLWNVDRELDKLLIT----EMKLKRPENF 924
HS+ TI +H W+ SL C ++ S S L +D + L+ +M L+ ++
Sbjct: 212 HSLRIVSTINDHMDWVTSLFSCTMQDSTSMLLSGGLDGIIRFWLLKPGDQDMALQVIDSR 271
Query: 925 IVASGLQGEKGSLTL 939
V G G GS TL
Sbjct: 272 NVNGGGSGVDGSYTL 286
Score = 46 (21.3 bits), Expect = 2.3e-09, Sum P(4) = 2.3e-09
Identities = 9/13 (69%), Positives = 12/13 (92%)
Query: 732 SMNSISGSVLNGN 744
++NS SGSVLNG+
Sbjct: 4 NLNSSSGSVLNGS 16
Score = 45 (20.9 bits), Expect = 6.3e-11, Sum P(4) = 6.3e-11
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 922 ENFIVASGLQGEKGSLTLTFPGLKAGLELWKSSSEF 957
+N V++ E G + + L +++W++SS F
Sbjct: 1215 KNSFVSAVTFNESGKMLACYCSLSNEIKIWQASSTF 1250
Score = 44 (20.5 bits), Expect = 4.8e-06, Sum P(4) = 4.8e-06
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 303 FRLLGSGSTIG----EICF-VDNLFCLEGGSTNSYVIGAMFLERVVAE--KIENTMGVCT 355
F LLG G + + F L C E T + A+ L R + +ENT+ T
Sbjct: 867 FGLLGHGGNMSFLTPSVSFSTGKLQCSET-LTAQTTLSAVALGRTILRIGGMENTVSQLT 925
Query: 356 TFY 358
T+Y
Sbjct: 926 TYY 928
Score = 42 (19.8 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 12 GTPPSHRVTATSALTQPPTLYTGGSDGSI 40
G RVTA+ L L G DGSI
Sbjct: 540 GKARQQRVTASLLLDDTMMLIRGYEDGSI 568
Score = 41 (19.5 bits), Expect = 2.3e-09, Sum P(4) = 2.3e-09
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 852 HGTETAGPNAMTAADGSNGHSMS 874
+GT + GP+ ++ + GS+ M+
Sbjct: 23 NGTYSNGPSPLSVSGGSSSSGMN 45
Score = 40 (19.1 bits), Expect = 2.0e-11, Sum P(4) = 2.0e-11
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 80 DGKAEHWKAENSSNVMGKSSLDN--GALISACTDGVLCVWSRSSG 122
D +H +SS++ K N G L+ DG + +W SG
Sbjct: 667 DLSCKHMFGVHSSSI-SKVHWKNEQGYLMVETIDGSVSIWEMGSG 710
Score = 38 (18.4 bits), Expect = 1.3e-24, Sum P(5) = 1.3e-24
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 153 GCCFIDTNQLSDHHSFESVEGDLVSEDKEVPMKNPPKCTLVIVDTYGLTIVQTV 206
G C + T +S S + + K+V + + IVD + L IV T+
Sbjct: 169 GLCLLST--VSHFLSCSPTQMVSLPNRKQVAVCGKGSNYIYIVDIHSLRIVSTI 220
Score = 38 (18.4 bits), Expect = 2.8e-22, Sum P(4) = 2.8e-22
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 31 LYTGGSDGSILWW 43
L +GG DG I +W
Sbjct: 242 LLSGGLDGIIRFW 254
Score = 37 (18.1 bits), Expect = 1.7e-21, Sum P(5) = 1.7e-21
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 33 TGGSDGSILWWSFSD 47
+ SDGS+ WS D
Sbjct: 154 SAASDGSMSVWSIMD 168
Score = 37 (18.1 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 706 VKTGARERVLRGTASHSMFDHFCKGISMNSISGSVLNGNTSVSSLLLPI 754
V G+ + G S+++ + + ++ N+ S +LN T + L+P+
Sbjct: 35 VSGGSSSSGMNG--SNALLSNSLQSVNGNNSSNYILNKGTEI---LVPV 78
>MGI|MGI:1860197 [details] [associations]
symbol:Wdr7 "WD repeat domain 7" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1860197 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466528 InterPro:IPR011047 SUPFAM:SSF50998
EMBL:AF188123 EMBL:AF188124 EMBL:AK154451 EMBL:BC125573
EMBL:BC137785 EMBL:AK122304 IPI:IPI00120637 IPI:IPI00380997
RefSeq:NP_001014981.1 UniGene:Mm.30850 ProteinModelPortal:Q920I9
SMR:Q920I9 IntAct:Q920I9 STRING:Q920I9 PhosphoSite:Q920I9
PaxDb:Q920I9 PRIDE:Q920I9 DNASU:104082 Ensembl:ENSMUST00000072726
GeneID:104082 KEGG:mmu:104082 CTD:23335 eggNOG:NOG265456
GeneTree:ENSGT00520000055590 HOGENOM:HOG000001566
HOVERGEN:HBG067501 InParanoid:Q059Q1 OMA:RTQEDTV OrthoDB:EOG4G1MFH
ChiTaRS:WDR7 NextBio:356481 Bgee:Q920I9 CleanEx:MM_WDR7
Genevestigator:Q920I9 Uniprot:Q920I9
Length = 1489
Score = 149 (57.5 bits), Expect = 6.1e-17, Sum P(6) = 6.1e-17
Identities = 45/178 (25%), Positives = 77/178 (43%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH V CL V + L+SG +D S+ IWD+ SG + + H + Q+
Sbjct: 462 GHRNKVTCLLYPHQVSARYDQRY---LISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQL 518
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVV-WDCPRGYIAC 686
++ P C SV D SV L SL + + H +P +V+ W Y+
Sbjct: 519 LVPPENCSARVQHCICSVASDHSVGLLSLREKKCIMLASRHL-FPIQVIKWRPSDDYLVV 577
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGI--SMNSISGSVLN 742
C D S +++W + TGA +R G + + + + + +++S+S +N
Sbjct: 578 GCTDGS--------VYVWQMDTGALDRCAMGITAVEILNACDEAVPAAVDSLSHPAVN 627
Score = 88 (36.0 bits), Expect = 6.1e-17, Sum P(6) = 6.1e-17
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 9 IWSGTPPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPIAD 68
+W P+H +++ T+ TG DG I W S E+ P A+L GH+A I
Sbjct: 12 LWGRKAPTHCISSILLTDDGGTIVTGCHDGQICLWDVSVEL--EVNPRALLFGHTASITC 69
Query: 69 LS 70
LS
Sbjct: 70 LS 71
Score = 70 (29.7 bits), Expect = 6.1e-17, Sum P(6) = 6.1e-17
Identities = 29/120 (24%), Positives = 56/120 (46%)
Query: 825 ASLMFPYQMHESAAKNGDKQENFTTMEHGTETAGPNAMTAADGSNGHSMSTD-TIEEHTW 883
A+++F Q+ E+ +N +E+ E E A + +D S S T+ E+
Sbjct: 739 AAVLFQ-QVKETIKEN--IKEHLLDEEEDEEEARRQSREDSDPEYRASKSKPLTLLEY-- 793
Query: 884 IKSLEECILRFSLSFLHLWNVDRELDKLLITEMKLKRPENFIVASGLQGEKGSLTLTFPG 943
+L + +S LH W ++ LD++ + + + +P + V+ GL G ++L PG
Sbjct: 794 --NLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKP-HCTVSFGLLSRGGHMSLMLPG 850
Score = 68 (29.0 bits), Expect = 6.1e-17, Sum P(6) = 6.1e-17
Identities = 45/215 (20%), Positives = 87/215 (40%)
Query: 1141 LAMLVVQPLIKLVMATNEKYSSTAAELLAEGMESTWKTCIGFEIPRLIGDIFFQIECVSN 1200
L L++QP + + TA +L+ G + W+ + ++ ++ +
Sbjct: 1178 LTYLLLQPPSPK-LPPHSTIRRTATDLIGRGF-TVWEPYM--DVSAVLMGLLELCADAEK 1233
Query: 1201 SSANLAGQHPAVPASIRETLVGILLPSLAMADILGFLTVVESQIW-------STASDSPV 1253
AN+ P PA+ L +A A F+T + ++ +T S +
Sbjct: 1234 QLANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQSI 1293
Query: 1254 HLVSIMT----IIRVVR----GSPRNVAQHLDKVVNFILQTMDPGNSVMRKTCLHTSMAA 1305
H ++ I+RV+ P +V L +V++ I+ ++ S+++K L A
Sbjct: 1294 HTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLE--GSLVKKKGLQECFPA 1351
Query: 1306 LKEIVHVFPMVSLNDTSTKLAVGDAIGDIKKASIR 1340
+ F MVS + S ++AVG G + IR
Sbjct: 1352 ICR----FYMVSYYERSHRIAVGARHGSVALYDIR 1382
Score = 67 (28.6 bits), Expect = 6.1e-17, Sum P(6) = 6.1e-17
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 1002 KPPLLQLLVSFWQDESEHVRMAARSL 1027
+PPLL++L WQD VR AA++L
Sbjct: 1004 RPPLLEMLARRWQDRCLEVREAAQAL 1029
Score = 61 (26.5 bits), Expect = 1.6e-05, Sum P(5) = 1.6e-05
Identities = 39/193 (20%), Positives = 82/193 (42%)
Query: 701 LFIWDVKTGARERVLRGTASHSMFDHFCKGI--SMNSISGSVLNGNTSVSSLLLPIHEDG 758
+++W + TGA +R G + + + + + +++S+S +N +++ L ++
Sbjct: 584 VYVWQMDTGALDRCAMGITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNM 643
Query: 759 TFRQSQIQNDERGVAFSTISEPSASHVRKGNSGKPSLNTRIGLQRKKQTIKCSCPYPGIA 818
+ Q +A + ++ ++ KGN K S N+ + Q IK + P I
Sbjct: 644 AHHKLQT------LATNLLASEASD---KGNLPKYSHNSLM-----VQAIKTNLTDPDIH 689
Query: 819 TLSFDLASLMFPYQMHESAAKNGD--KQENFTTMEHGTETAGPNAMTAADGSNGHSMSTD 876
L FD+ +L+ E++ N EN G+ G + +T + +
Sbjct: 690 VLFFDVEALIIQLLTEEASRPNTALISPENLQKAS-GSSDKGGSFLTGKRAAVLFQQVKE 748
Query: 877 TIEEHTWIKSLEE 889
TI+E+ L+E
Sbjct: 749 TIKENIKEHLLDE 761
Score = 59 (25.8 bits), Expect = 6.9e-13, Sum P(5) = 6.9e-13
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 101 DNGALISACTDGVLCVWSRS 120
D G +++ C DG +C+W S
Sbjct: 30 DGGTIVTGCHDGQICLWDVS 49
Score = 55 (24.4 bits), Expect = 6.1e-17, Sum P(6) = 6.1e-17
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 98 SSLDNGALISACTDGVLCVWSRSSGHCRRRRKL 130
+S D +SA +G +C+W + G C KL
Sbjct: 75 ASGDKRYTVSASANGEMCLWDVNDGRCIEFTKL 107
Score = 49 (22.3 bits), Expect = 8.4e-06, Sum P(5) = 8.4e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 105 LISACTDGVLCVWSRSSG 122
L+ CTDG + VW +G
Sbjct: 575 LVVGCTDGSVYVWQMDTG 592
Score = 38 (18.4 bits), Expect = 1.3e-11, Sum P(5) = 1.3e-11
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 1311 HVFPMVSLNDTSTKLAVGDAIGD-IKKASIR 1340
H+ ++SL +T + IGD +KK R
Sbjct: 890 HLLSIISLANTLMSMTNATFIGDHMKKGPTR 920
>FB|FBgn0023510 [details] [associations]
symbol:Rbcn-3B "Rabconnectin-3B" species:7227 "Drosophila
melanogaster" [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0007035 "vacuolar acidification" evidence=IMP] [GO:0008593
"regulation of Notch signaling pathway" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005773 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
EMBL:AE014298 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0007035
GO:GO:0008593 GeneTree:ENSGT00520000055590 OMA:RTQEDTV
FlyBase:FBgn0023510 EMBL:BT015183 RefSeq:NP_569960.2 UniGene:Dm.22
SMR:Q9W543 EnsemblMetazoa:FBtr0070316 GeneID:31155
KEGG:dme:Dmel_CG17766 UCSC:CG17766-RA CTD:31155 InParanoid:Q9W543
GenomeRNAi:31155 NextBio:772201 Uniprot:Q9W543
Length = 1525
Score = 167 (63.8 bits), Expect = 2.9e-16, Sum P(5) = 2.9e-16
Identities = 57/213 (26%), Positives = 93/213 (43%)
Query: 510 KIVSSSMVISESFYAPYA--IVYGFFSGEIEVIQF-DLFERHNSPGASLKVNSHVSRQYF 566
+I S + ++ S Y P +V G G I ++ G + S Q
Sbjct: 398 RITESPVKLTSSIYLPQQSRLVIGREDGSIVIVPATQTVMMQLLVGIKQNFSDWPSHQIL 457
Query: 567 LGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQ 626
GH G V CL M+ + S L+SG +D ++ +WDL SG+L+ H + Q
Sbjct: 458 YGHRGRVNCLLCPSMIHSRYEKSH---LLSGGIDFAVCLWDLYSGSLLHRFCVHAGEITQ 514
Query: 627 IILSPPQTEHPWS-DCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVV-WDCPRGYI 684
+++ PP++ P C SV D SV L SL+ + + H +P + W ++
Sbjct: 515 LLV-PPESCSPRILKCICSVASDHSVTLVSLQERKCVTLASRHL-FPVVTIKWRPLDDFL 572
Query: 685 ACLCRDHSRTSDAVDVLFIWDVKTGARERVLRG 717
C D S +++W ++TG +RVL G
Sbjct: 573 IVGCSDGS--------VYVWQMETGHLDRVLHG 597
Score = 93 (37.8 bits), Expect = 2.9e-16, Sum P(5) = 2.9e-16
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 9 IWSGTPPSHRVTATSALTQPPTLYTGGSDGSILWWSFSDSSYSEIKPVAMLCGHSAPI 66
+W T P+H +++ TL TG DG I W ++ ++ P +L GHSAP+
Sbjct: 12 LWGPTAPTHCISSVFLSDDQFTLVTGCYDGQICLWQVEPTTL-KMSPRCLLVGHSAPV 68
Score = 75 (31.5 bits), Expect = 2.9e-16, Sum P(5) = 2.9e-16
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 891 ILRFSLSFLHLWNVDRELDKLLITEMKLKRPENFIVASGLQGEKGSLTLTFP 942
+ + LS LH W +D LDK+ T + L RP ++ G+ + G ++L P
Sbjct: 826 VAQLLLSLLHSWGLDPHLDKMCETRLGLLRPI-VPISYGVLSKAGYMSLLLP 876
Score = 68 (29.0 bits), Expect = 2.9e-16, Sum P(5) = 2.9e-16
Identities = 33/117 (28%), Positives = 46/117 (39%)
Query: 101 DNGALISACTDGVLCVWSRSSGHCRRRRKLPPWVGSPSVICTLPSNP-RYVCIG----CC 155
+N L+S+ +G +C W + G C KLP T S R CIG
Sbjct: 79 ENNFLVSSSENGEMCTWDLTDGKCMEAVKLPQVHTQIQSYHTANSEDVRLFCIGYYAEIM 138
Query: 156 FIDTNQLSDHHSFES-VEGDLVSEDKEV-PMKNPPKCTLVIVDTYGLTIVQTVFHGN 210
+D L + S V+ D +S + PM+ L I T G V T+ GN
Sbjct: 139 VMDPFSLEVIYVLSSKVKPDWISAIHVLRPMRRKDDVVLAITTT-GTVKVWTLT-GN 193
Score = 60 (26.2 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 582 VGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVA 622
V T K ++ L+ G D S+ +W + +G+L V+H +A
Sbjct: 560 VVTIKWRPLDDFLIVGCSDGSVYVWQMETGHLDRVLHGMLA 600
Score = 51 (23.0 bits), Expect = 9.4e-10, Sum P(4) = 9.4e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 101 DNGALISACTDGVLCVW 117
D L++ C DG +C+W
Sbjct: 30 DQFTLVTGCYDGQICLW 46
Score = 44 (20.5 bits), Expect = 2.9e-16, Sum P(5) = 2.9e-16
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 1002 KPPLLQLLVSFWQDESEHVRMAARSL 1027
K P ++++V WQ +R AA+ +
Sbjct: 1014 KRPQVEMMVKRWQHHCIEIREAAQQI 1039
Score = 39 (18.8 bits), Expect = 9.2e-16, Sum P(5) = 9.2e-16
Identities = 7/38 (18%), Positives = 19/38 (50%)
Query: 1299 LHTSMAALKEIVHVFPMVSLNDTSTKLAVGDAIGDIKK 1336
LH ++ H+ +V++++T ++ + D +K
Sbjct: 917 LHWELSTTLTTNHILALVAMSNTLLSMSAASFLPDSEK 954
Score = 39 (18.8 bits), Expect = 1.0e-12, Sum P(4) = 1.0e-12
Identities = 21/104 (20%), Positives = 38/104 (36%)
Query: 797 TRIGLQRKKQTIKCSCPYPGIATLSFDLASLMFPYQMHESAAKNGDKQENFTTMEHGTET 856
TR+G + +KQ ++ Y + T + + + A G + G
Sbjct: 1045 TRMGKKGRKQLVESWAQYLPLYTHTEPIVGAQQQLALISQPASGGAGSGSGGNGGVGVGV 1104
Query: 857 AGPNAMTAADGSNGHSMSTDTIEEHTWIKSLEECILR-FSLSFL 899
+G + G G D ++ + + EE I + SLS L
Sbjct: 1105 SGGGGAGSGSGPGGSVPGGDAHQDEDYEEEEEEIIRKPSSLSEL 1148
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 58/173 (33%), Positives = 80/173 (46%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A G N+ V+GS D +I+IWDL SG L + H++ VR +
Sbjct: 201 GHLGWVRCIAVE------PG---NQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 251
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDC-PRGYIAC 686
I+S T P+ S GED V LE +V R + GH + A D P +
Sbjct: 252 IVS---TRSPY---LFSCGEDKQVKCWDLEYNKVIRHYHGHLS--AVYGLDLHPTIDVLV 303
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGS 739
C SR S A IWDV+T A L G ++++ C+ I+GS
Sbjct: 304 TC---SRDSTAR----IWDVRTKASVHTLSGH-TNAVATVRCQAAEPQIITGS 348
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 58/173 (33%), Positives = 80/173 (46%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A G N+ V+GS D +I+IWDL SG L + H++ VR +
Sbjct: 201 GHLGWVRCIAVE------PG---NQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 251
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDC-PRGYIAC 686
I+S T P+ S GED V LE +V R + GH + A D P +
Sbjct: 252 IVS---TRSPY---LFSCGEDKQVKCWDLEYNKVIRHYHGHLS--AVYGLDLHPTLDVLV 303
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGS 739
C SR S A IWDV+T A L G ++++ C+ I+GS
Sbjct: 304 TC---SRDSTAR----IWDVRTKASVHTLSGH-TNAVATVRCQAAEPQIITGS 348
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 139 (54.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 58/173 (33%), Positives = 80/173 (46%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A G N+ V+GS D +I+IWDL SG L + H++ VR +
Sbjct: 202 GHLGWVRCIAVE------PG---NQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 252
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDC-PRGYIAC 686
I+S T P+ S GED V LE +V R + GH + A D P +
Sbjct: 253 IVS---TRSPY---LFSCGEDKQVKCWDLEYNKVIRHYHGHLS--AVYGLDLHPTIDVLV 304
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGS 739
C SR S A IWDV+T A L G ++++ C+ I+GS
Sbjct: 305 TC---SRDSTAR----IWDVRTKASVHTLSGH-TNAVATVRCQAAEPQIITGS 349
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 139 (54.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 58/173 (33%), Positives = 80/173 (46%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A G N+ V+GS D +I+IWDL SG L + H++ VR +
Sbjct: 202 GHLGWVRCIAVE------PG---NQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 252
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDC-PRGYIAC 686
I+S T P+ S GED V LE +V R + GH + A D P +
Sbjct: 253 IVS---TRSPY---LFSCGEDKQVKCWDLEYNKVIRHYHGHLS--AVYGLDLHPTIDVLV 304
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGS 739
C SR S A IWDV+T A L G ++++ C+ I+GS
Sbjct: 305 TC---SRDSTAR----IWDVRTKASVHTLSGH-TNAVATVRCQAAEPQIITGS 349
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 139 (54.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 58/173 (33%), Positives = 80/173 (46%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A G N+ V+GS D +I+IWDL SG L + H++ VR +
Sbjct: 203 GHLGWVRCIAVE------PG---NQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 253
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDC-PRGYIAC 686
I+S T P+ S GED V LE +V R + GH + A D P +
Sbjct: 254 IVS---TRSPY---LFSCGEDKQVKCWDLEYNKVIRHYHGHLS--AVYGLDLHPTIDVLV 305
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGS 739
C SR S A IWDV+T A L G ++++ C+ I+GS
Sbjct: 306 TC---SRDSTAR----IWDVRTKASVHTLSGH-TNAVATVRCQAAEPQIITGS 350
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 135 (52.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 70/268 (26%), Positives = 114/268 (42%)
Query: 451 VGEGFSFVDWVNNSTFL----DENEGSCTGKSDLTFCQDTVPRSEHVDSRQAGDGRD--- 503
V + +S + W N +++ + G+ L DT R E S +G+G+
Sbjct: 14 VDKFYSRIRWNNQFSYMATLPPHLQSEMEGQKSLLMRYDTY-RKE--SSSFSGEGKKVTL 70
Query: 504 DFVHKEKIVSSSMVISESFYAPYA--IVYGFFSGEI-EVIQFDLFERHNSPGASLKVNSH 560
V + +S VIS+ + +A V F E+ E + + +E+ S
Sbjct: 71 QHVPTDFSEASQAVISKKDHDTHASAFVNKIFQPEVAEELIVNRYEKLLSQRPEWHAPWK 130
Query: 561 VSRQYFLGHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHH 620
+SR GH G V C+A + NE ++GS D ++++WDL +G L T + H
Sbjct: 131 LSR-VINGHLGWVRCVAIDPVD--------NEWFITGSNDTTMKVWDLATGKLKTTLAGH 181
Query: 621 VAPVRQIILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCP 680
V VR + +S HP+ SV ED +V LE ++ R + GH + V
Sbjct: 182 VMTVRDVAVSD---RHPY---LFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPT 235
Query: 681 RGYIACLCRDHSRTSDAVDVLFIWDVKT 708
IA RD V+ +WD++T
Sbjct: 236 LDLIATAGRD--------SVIKLWDMRT 255
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 133 (51.9 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 56/173 (32%), Positives = 79/173 (45%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A G N+ V+GS D +I+IWDL SG L + H++ VR +
Sbjct: 204 GHLGWVRCIAVE------PG---NQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 254
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDC-PRGYIAC 686
I+S P+ S GED V LE +V R + GH + A D P +
Sbjct: 255 IVS---ARSPY---LFSCGEDKQVKCWDLEYNKVIRHYHGHLS--AVYGLDLHPTIDVLV 306
Query: 687 LCRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGS 739
C SR S A IWDV+T A L G ++++ C+ ++GS
Sbjct: 307 TC---SRDSTAR----IWDVRTKASVHTLSGH-TNAVATVKCQAAEPQVVTGS 351
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 62/223 (27%), Positives = 92/223 (41%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C V G N+ +G+ D +I+IWDL SG L + H+A VR +
Sbjct: 161 GHLGWVRC------VDVEPG---NQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGL 211
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPN--YPAKVVWDCPRGYIA 685
+SP HP+ S GED V LET +V R + GH + Y K+ P
Sbjct: 212 AVSP---RHPY---LFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLH---PT---- 258
Query: 686 CLCRDHSRTSDAVDVLFIWDVKTGARERVLRG---TASHSMFDHFCKGISMNSISGSVLN 742
D T+ V +WD++T VL G T + F + S+ ++
Sbjct: 259 ---LDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRL 315
Query: 743 GNTSVSSLLLPI-HEDGTFRQSQIQNDERGVAFSTISEPSASH 784
+ + L + H T R + DE F++ S + H
Sbjct: 316 WDLAAGKTLTTLTHHKKTVRALSLHPDE--FTFASGSSDNIKH 356
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 52/172 (30%), Positives = 78/172 (45%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GHTG V R V G N+ SG D I+IWDL SG L + H++ VR +
Sbjct: 182 GHTGWV------RAVDVEPG---NQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAV 232
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACL 687
+SP HP+ S GED V LE +V R + GH + + + P +
Sbjct: 233 KVSP---RHPF---LFSGGEDKQVKCWDLEYNKVIRHYHGHLS-AVQALSVHPSLDVLVT 285
Query: 688 CRDHSRTSDAVDVLFIWDVKTGARERVLRGTASHSMFDHFCKGISMNSISGS 739
C +R S A +WD++T A+ G ++++ D C+ + I+ S
Sbjct: 286 C---ARDSTAR----VWDMRTKAQVHCFAGH-TNTVADVVCQSVDPQVITAS 329
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 126 (49.4 bits), Expect = 0.00036, P = 0.00036
Identities = 48/150 (32%), Positives = 66/150 (44%)
Query: 568 GHTGAVLCLAAHRMVGTAKGWSFNEVLVSGSMDCSIRIWDLGSGNLITVMHHHVAPVRQI 627
GH G V C+A G NE +G+ D I+IWDL SG L + HV+ VR +
Sbjct: 170 GHLGWVRCIAVE------PG---NEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGV 220
Query: 628 ILSPPQTEHPWSDCFLSVGEDFSVALASLETLRVERMFPGHPNYPAKVVWDCPRGYIACL 687
+S T+HP+ S GED V LE +V R + GH + + +A
Sbjct: 221 AVS---TKHPY---LFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATS 274
Query: 688 CRDHSRTSDAVDVLFIWDVKTGARERVLRG 717
RD + IWD++T A L G
Sbjct: 275 GRDSTAR--------IWDMRTKANVHTLTG 296
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1358 1348 0.00087 124 3 11 22 0.38 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 635 (67 KB)
Total size of DFA: 645 KB (2282 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 109.68u 0.09s 109.77t Elapsed: 00:00:07
Total cpu time: 109.68u 0.09s 109.77t Elapsed: 00:00:07
Start: Mon May 20 21:30:06 2013 End: Mon May 20 21:30:13 2013