Query 000680
Match_columns 1354
No_of_seqs 484 out of 5044
Neff 7.7
Searched_HMMs 29240
Date Tue Mar 26 17:16:55 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000680.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_450-454//hhsearch_pdb/000680hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1390.8 102.5 1125 217-1352 1-1221(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1098.6 99.2 1018 324-1352 114-1175(1284)
3 4a82_A Cystic fibrosis transme 1.0 1 1 627.2 64.7 545 270-817 7-574 (578)
4 4f4c_A Multidrug resistance pr 1.0 1 1 626.8 59.5 529 289-819 761-1316(1321)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 616.8 62.2 542 273-820 33-591 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 614.4 69.6 545 269-819 15-578 (587)
7 3b60_A Lipid A export ATP-bind 1.0 1 1 589.7 70.8 541 271-819 19-579 (582)
8 3b5x_A Lipid A export ATP-bind 1.0 1 1 588.2 74.6 541 271-819 19-579 (582)
9 2yl4_A ATP-binding cassette SU 1.0 1 1 586.8 68.6 543 271-817 13-581 (595)
10 3g5u_A MCG1178, multidrug resi 1.0 1 1 538.3 56.9 542 275-820 703-1271(1284)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1390.83 Aligned_cols=1125 Identities=19% Similarity=0.215 Sum_probs=824.6
Q ss_pred HHHHHC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC---------CCCCCCHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 998041-7998889999999559289999999999999987202---------799983089999999-66879999999
Q 000680 217 LLSLGY-SKPLALEDIPSLVPEDEASFAYQKFAYAWDSLVRENN---------SNNNGNLVRKVITNV-YLKENIFIAIC 285 (1354)
Q Consensus 217 l~~~g~-~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~---------~~~~~~~l~~~l~~~-~~~~~~~~~~~ 285 (1354)
+++.|. |++|+..|.+.+.++|..+...+.+++.|.+..++.. ++..++.-++.||+. -++++++..+.
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHH
T ss_conf 98773100687635445679501110000113454243554334310012232025687799997315676789999999
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHCC-------CC--------CC----CHHHH---H-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999---99998413-------79--------73----34689---9-999999999999999999999
Q 000680 286 ALLRTIAVVVGPLLL---YAFVNYSN-------RG--------EE----NLQEG---L-SIVGCLIITKVVESFTQRHCF 339 (1354)
Q Consensus 286 ~~~~~~~~~~~P~ll---~~li~~~~-------~~--------~~----~~~~g---~-~~~~~l~~~~~~~~~~~~~~~ 339 (1354)
.+...+.+.+.|++. ..+++.+. .. .. ..... + ++.++++++..+-+.. ..
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~---~~ 157 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQI---TV 157 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH
T ss_conf 999999999999999999999999970100014543000344310016899999999999999999999999999---99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999985489456788997899999996999996289-89999999999999999999999968
Q 000680 340 FGSRRSGMRMRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFP-FWFHLTWSLALQLFLAIGVLFGVVGL 418 (1354)
Q Consensus 340 ~~~~~~g~r~r~~l~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~~i~~~~-~~~~~~w~~plqi~ia~~~L~~~lG~ 418 (1354)
+.....|.|+-..+...+|+|.++++-...+++++|+++|.++.|++++.+++ ..+..++..++.++.++++++..-..
T Consensus 158 ~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~ 237 (1321)
T 4f4c_A 158 TCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQ 237 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997889899879984899999999999999999999999999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999989999999999999999999999999999942999998224999999999999999999999999
Q 000680 419 GALPGLVLFLICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSEAQL 498 (1354)
Q Consensus 419 ~~l~gl~v~~i~~~l~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~i~~~R~~El~~l~~~~~ 498 (1354)
.+++.++++.+..++...+++.+.+.+++.++..+++.+.++|.++|||+||+|+||+.+.++..+..++..+...+...
T Consensus 238 l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 317 (1321)
T 4f4c_A 238 LTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGL 317 (1321)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999983999998214299999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999999999899999-9999999998728988888889999999999999999999999999999999999999843567
Q 000680 499 RKAYGTVIYWMSPTI-ISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHE 577 (1354)
Q Consensus 499 ~~~~~~~~~~~~p~l-v~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e 577 (1354)
..+...........+ ..++.+.+..++.++.++++.+|+.+.++..+..|+..++..+..+.++.+|.+||.+||+.++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 397 (1321)
T 4f4c_A 318 FLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKP 397 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999999599869999999999999999999899999999999999999999971785
Q ss_pred C-CCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 9-960000012358998489984379727999887311266885088089998799988778998882986588738999
Q 000680 578 L-NNDDVRRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNL 656 (1354)
Q Consensus 578 ~-~~~~~~~~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilGe~~~~~G~v~~ 656 (1354)
. ++.........+..+.|+++|++|+|+..++.|+|+|+||++++|++++|||++|||||||+++|+|++++.+|+|.+
T Consensus 398 ~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G~I~i 477 (1321)
T 4f4c_A 398 VIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITI 477 (1321)
T ss_dssp CSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCC
T ss_conf 34566655656778887679998554079999874333318862288278998058985778888754565164486157
Q ss_pred CC-------------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCH
Q ss_conf 19-------------1999807887898758899723999-998999999999510798821899996312688887794
Q 000680 657 YG-------------SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSG 722 (1354)
Q Consensus 657 ~g-------------~iayv~Q~pwi~~~TireNIlfg~~-~d~~~y~~vi~ac~L~~dl~~lp~GD~T~IGe~G~~LSG 722 (1354)
+| +|+||+|+||++|+||||||+||+| .+++++.++++.|++++|++.||+||+|+|||+|.+|||
T Consensus 478 dG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LSG 557 (1321)
T 4f4c_A 478 DGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSG 557 (1321)
T ss_dssp TTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCCH
T ss_pred CCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCH
T ss_conf 99650112599985046665875332078616788641552209999999987565468870888886075589887777
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECCH
Q ss_conf 89999999999804998999828788869999999999999781499589997489431520297999939848893386
Q 000680 723 GQKQRIQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNY 802 (1354)
Q Consensus 723 GQkqRi~LARAvy~~~di~lLDdp~salD~~~~~~if~~~i~~~l~~kT~Ilvth~~~~l~~~d~i~~l~~G~i~~~G~~ 802 (1354)
||||||+||||+|++|+||+|||||||||+++++ ++++++.+.+++||+|+|||++++++.||+|++|++|+|+|+|+|
T Consensus 558 GQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~-~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gth 636 (1321)
T 4f4c_A 558 GQKQRIAIARALVRNPKILLLDEATSALDAESEG-IVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDH 636 (1321)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHH-HHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEEECH
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH-HHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECCCCH
T ss_conf 7879999999872599989984554468878999-999999998479889997363878986898999639965136899
Q ss_pred HHHHHCCCHHHHHHHHHHHHCCC----CCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-
Q ss_conf 89986182489999972210026----999988899--98521112467889999998887778643211124687625-
Q 000680 803 QELLLAGTAFEQLVNAHRDAITG----LGPLDNAGQ--GGAEKVEKGRTARPEEPNGIYPRKESSEGEISVKGLTQLTE- 875 (1354)
Q Consensus 803 ~el~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 875 (1354)
+||+++++.|.++++.+...... ......... ......+.......+........+..... ........+
T Consensus 637 ~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 713 (1321)
T 4f4c_A 637 RALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIG---SITNGPVIDE 713 (1321)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHCC---------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC---CCCCCCCHHH
T ss_conf 9999853279999996221222233233443322321112222234222222211022111013212---4567740257
Q ss_pred --------------HHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCC---CCC
Q ss_conf --------------8787606602899999998604525899999999999999996999999651----2787---760
Q 000680 876 --------------DEEMEIGDVGWKPFMDYLNVSKGMSLLCLGVLAQSGFVGLQAAATYWLAYAI----QIPK---ITS 934 (1354)
Q Consensus 876 --------------~e~~~~g~v~~~~y~~y~~~~~g~~~~~l~~~~~~~~~~~~~~~~~wl~~~~----~~~~---~~~ 934 (1354)
+|.++.|..++..+..|......++.+++.+++............+|+..|. ..+. ...
T Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1321)
T 4f4c_A 714 KEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQG 793 (1321)
T ss_dssp --CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTH
T ss_pred HHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 77531540389999999970786310999999987789999999999999999999999999999987517934556678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHHCHHHHHHHHHHH
Q ss_conf 288999989999999999999999999999999999999999876397766333--580147998731399999431999
Q 000680 935 GILIGVYAGVSTASAVFVYFRSFFAAHLGLKASKAFFSGFTNSIFKAPMLFFDS--TPVGRILTRLSSDLSILDFDIPFS 1012 (1354)
Q Consensus 935 ~~~l~iy~~l~~~~~i~~~~~~~~~~~~~~~as~~l~~~l~~~il~~p~~fFd~--~p~GrIlnRfs~D~~~id~~l~~~ 1012 (1354)
.+|..+|++++++..++.+++.++....+.++++++|.+++++++++|++|||+ +|+|+|+|||++|++.+|..++..
T Consensus 794 ~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~ 873 (1321)
T 4f4c_A 794 HFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFR 873 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998887349933321678884888850250599999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCC
Q ss_conf 99999999999999998997758999999999999999999999977999999816035278999997615388872341
Q 000680 1013 IVFVAASGTELLAIIGIMTFVTWQVLVVAIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFNM 1092 (1354)
Q Consensus 1013 l~~~~~~~~~~i~~i~vi~~~~~~~~l~~i~~~~~~~~i~~~y~~~sr~l~rl~~~~~spi~s~~~Etl~Gl~tIRaf~~ 1092 (1354)
+..++..++.+++.++++++.+|.+.++++++++++.+...++.+..+...+......++...++.|+++|++|||+|++
T Consensus 874 l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~ 953 (1321)
T 4f4c_A 874 FSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAR 953 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999986537777022137868999999998889999999999999999999999988898899999962798886141
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCC--CCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999988866799999999999999999989999999999-99852896--5766999999999999999999
Q 000680 1093 VDRFFQNYLKLVDIDASLFFHTNGVMEWLILRVEALQNLTLFTAALF-LVLIPRGY--VAPGLVGLSLSYAFTLTGTQVF 1169 (1354)
Q Consensus 1093 ~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~l~-~v~~~~g~--ls~g~~gl~l~ya~~l~~~l~~ 1169 (1354)
|+++.+++.+..|...+..+.......+.......+..+....+... ..++..+. +.++.+...+.+......++.+
T Consensus 954 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1033 (1321)
T 4f4c_A 954 EDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGF 1033 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 48899999999999999999999999999999999999999999987578875376542147899999999877889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCCCCCEEEEECCCEEEE
Q ss_conf 999999999885599999983439999998777899999999866099998899847999-9842262288609969999
Q 000680 1170 LSRWYCYLANYIISVERIKQFMHIPPEPPAIVEDKRPPSSWPFKGRIELRQLKIRYRPNA-PLVLKGITCTFSEGTRVGV 1248 (1354)
Q Consensus 1170 lv~~~~~le~~~~sveRi~ey~~~~~E~~~~~~~~~~~~~wp~~G~Ief~nvsfrY~~~~-~~VLk~Isl~I~~GekVgI 1248 (1354)
+.+.+.+++..+.+++|+.++++.++|.+ +...+++.||..|+|+|+||+|+|+++. .+||||+||+|+|||||||
T Consensus 1034 ~~~~~~~~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaI 1110 (1321)
T 4f4c_A 1034 ATSYFPEYAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLAL 1110 (1321)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEE
T ss_conf 99999999999999998999860766577---766778788888818999879857999988212451699889899999
Q ss_pred ECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCCEECCCCCCCCCCHHHHC----CCCCCCCHHHHHH
Q ss_conf 879996489999999315489997799969638999947885019064466522345415514----9999999999999
Q 000680 1249 VGRTGSGKTTLISALFRLVEPAGGSILIDGVDICSMGLKDLRVKLSIIPQEPTLFRGSVRTNL----DPLGLYSDDEIWK 1324 (1354)
Q Consensus 1249 VGrTGSGKSTL~~~L~Rl~e~~~G~I~IDGvDI~~i~l~~LRs~isiIpQdp~LF~GTIR~NL----dp~~~~tDeeI~~ 1324 (1354)
|||||||||||+++|+|||||++|+|+|||+||+++++++||++|++|||||+||+||||+|| || .+++|+|||+
T Consensus 1111 VG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~-~~~sd~ei~~ 1189 (1321)
T 4f4c_A 1111 VGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDP-SSVTMAQVEE 1189 (1321)
T ss_dssp ECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCT-TTSCHHHHHH
T ss_pred ECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCC-CCCCHHHHHH
T ss_conf 899998199999999568638997899999986549999998545998789973272399997454999-9999999999
Q ss_pred HHHHCCCCHHHHCCCCCCCC----CCCCCCCC
Q ss_conf 99984980588307777678----88644442
Q 000680 1325 ALEKCQLKTTISSLPNKLDS----SGKLFSAA 1352 (1354)
Q Consensus 1325 AL~~a~l~~~I~~Lp~gldt----~G~n~s~~ 1352 (1354)
||++|+++|||++||+|||| +|.|+|.|
T Consensus 1190 Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgG 1221 (1321)
T 4f4c_A 1190 AARLANIHNFIAELPEGFETRVGDRGTQLSGG 1221 (1321)
T ss_dssp HHHHTTCHHHHHTSTTTTCSEETTTSCSSCHH
T ss_pred HHHHHCCHHHHHCCCCCCCCEECCCCCCCCHH
T ss_conf 99982984999717678999823889156999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1098.63 Aligned_cols=1018 Identities=18% Similarity=0.195 Sum_probs=732.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf 99999999999999999999999999999999999998548945678899789999999699999628989-99999999
Q 000680 324 LIITKVVESFTQRHCFFGSRRSGMRMRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFPFW-FHLTWSLA 402 (1354)
Q Consensus 324 l~~~~~~~~~~~~~~~~~~~~~g~r~r~~l~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~~i~~~~~~-~~~~w~~p 402 (1354)
++...++..++.....+...+.+.++-..+...+|+|.++++....++.++|+++|.++.|++.+.+.... +..+....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~ 193 (1284)
T 3g5u_A 114 YTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAM 193 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999869989975688778999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 99999999999999689999999999999998999999999999999999999999999994299999822499999999
Q 000680 403 LQLFLAIGVLFGVVGLGALPGLVLFLICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLI 482 (1354)
Q Consensus 403 lqi~ia~~~L~~~lG~~~l~gl~v~~i~~~l~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~i 482 (1354)
+.++.++++++..-...+++.++++.++..+...+.+...+..++..+..++..+...|.++|||+||.|++|+.+.++.
T Consensus 194 ~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~ 273 (1284)
T 3g5u_A 194 ATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERY 273 (1284)
T ss_dssp HHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHH
T ss_conf 99999999999998999999999999999999999999999999999999999999999997879999846539999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999-899999999999999872898888888999999999999999999999999999
Q 000680 483 ESRREKEFKWLSEAQLRKAYGTVIY-WMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQ 561 (1354)
Q Consensus 483 ~~~R~~El~~l~~~~~~~~~~~~~~-~~~p~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~L~~pl~~lp~~i~~~~~ 561 (1354)
.+.-++-.+.-.+.....+....+. ...-....++.+.+..++..+.++++.+++.+..+.....|+..+...+..+.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (1284)
T 3g5u_A 274 NNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFAN 353 (1284)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999929988999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCC-CCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHH
Q ss_conf 9999999999843567-996000001235899848998437972799988731126688508808999879998877899
Q 000680 562 VKVSFDRINAFLLDHE-LNNDDVRRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLL 640 (1354)
Q Consensus 562 a~vS~~RI~~fL~~~e-~~~~~~~~~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl 640 (1354)
+..+.+|+.++++.++ .++........++..+.|+++|++|+|+.+++.++|+|+||++++|+.++|+|++|||||||+
T Consensus 354 ~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~ 433 (1284)
T 3g5u_A 354 ARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTV 433 (1284)
T ss_dssp HHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHH
T ss_conf 99999999999728986776665677777777718999989976999987101254589759988999899999799999
Q ss_pred HHHHCCCCCCCCEEEECC-------------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCC
Q ss_conf 888298658873899919-------------1999807887898758899723999-99899999999951079882189
Q 000680 641 YAILGEIPKISGTVNLYG-------------SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFD 706 (1354)
Q Consensus 641 ~~ilGe~~~~~G~v~~~g-------------~iayv~Q~pwi~~~TireNIlfg~~-~d~~~y~~vi~ac~L~~dl~~lp 706 (1354)
++|+|++++.+|+|.++| +++||+|+||++++||+|||.||.+ .+++++.++++.|+++++++.+|
T Consensus 434 ~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~ 513 (1284)
T 3g5u_A 434 QLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLP 513 (1284)
T ss_dssp HHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHST
T ss_pred HHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCC
T ss_conf 99807889997389999998775799999865489868875377669999745798999999999999829699997465
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCC
Q ss_conf 99963126888877948999999999980499899982878886999999999999978149958999748943152029
Q 000680 707 HGDLTEIGQRGLNLSGGQKQRIQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVD 786 (1354)
Q Consensus 707 ~GD~T~IGe~G~~LSGGQkqRi~LARAvy~~~di~lLDdp~salD~~~~~~if~~~i~~~l~~kT~Ilvth~~~~l~~~d 786 (1354)
+|++|.+||+|.+|||||||||+||||+|++|+|++||||||+||+++++.+. +++....+++|+|+|||+++.+..||
T Consensus 514 ~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~i~~~d 592 (1284)
T 3g5u_A 514 HQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQ-AALDKAREGRTTIVIAHRLSTVRNAD 592 (1284)
T ss_dssp TGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHH-HHHHHHHTTSEEEEECSCHHHHTTCS
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCC
T ss_conf 63345014787865999999999999995299989997987777999999999-99999739998999940778997499
Q ss_pred EEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf 799993984889338689986182489999972210026999988899985211124678899999988877786432--
Q 000680 787 RILVLEGGQITQSGNYQELLLAGTAFEQLVNAHRDAITGLGPLDNAGQGGAEKVEKGRTARPEEPNGIYPRKESSEGE-- 864 (1354)
Q Consensus 787 ~i~~l~~G~i~~~G~~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 864 (1354)
+|++|++|+|++.|+|+|+++.++.|.++...+.......... ............. ...................
T Consensus 593 ~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 669 (1284)
T 3g5u_A 593 VIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGN--EACKSKDEIDNLD-MSSKDSGSSLIRRRSTRKSIC 669 (1284)
T ss_dssp EEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC----------------------------------------------
T ss_pred EEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCC
T ss_conf 8999989999997889999867877999999743002211133--3333222223443-333333320003454333445
Q ss_pred CCCCCCCCCCHHHHHH--HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCCC-----CC
Q ss_conf 1112468762587876--066028999999986045258999999999999999969----999996512787-----76
Q 000680 865 ISVKGLTQLTEDEEME--IGDVGWKPFMDYLNVSKGMSLLCLGVLAQSGFVGLQAAA----TYWLAYAIQIPK-----IT 933 (1354)
Q Consensus 865 ~~~~~~~~~~~~e~~~--~g~v~~~~y~~y~~~~~g~~~~~l~~~~~~~~~~~~~~~----~~wl~~~~~~~~-----~~ 933 (1354)
.......+...+|+.+ .....+..+++|.+.......+. +++.++..+..... ..++..+..... ..
T Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 747 (1284)
T 3g5u_A 670 GPHDQDRKLSTKEALDEDVPPASFWRILKLNSTEWPYFVVG--IFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQN 747 (1284)
T ss_dssp --------------CCCCCSCCCTTHHHHHHHHTCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHH
T ss_pred CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 64223321102455531366258999999845157999999--9999999999999999999999998556850336779
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCHHHHHHHHCHHHHHHHHHH
Q ss_conf 028899998999999999999999999999999999999999987639776633--358014799873139999943199
Q 000680 934 SGILIGVYAGVSTASAVFVYFRSFFAAHLGLKASKAFFSGFTNSIFKAPMLFFD--STPVGRILTRLSSDLSILDFDIPF 1011 (1354)
Q Consensus 934 ~~~~l~iy~~l~~~~~i~~~~~~~~~~~~~~~as~~l~~~l~~~il~~p~~fFd--~~p~GrIlnRfs~D~~~id~~l~~ 1011 (1354)
...+..+|++++++..++.+++.+.....+.+...++|.+++++++++|++||| .+|+|+++||+++|++.++..++.
T Consensus 748 ~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~ 827 (1284)
T 3g5u_A 748 SNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGS 827 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999983998887578998899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCC
Q ss_conf 99999999999999999899775899999999999999999999997799999981603527899999761538887234
Q 000680 1012 SIVFVAASGTELLAIIGIMTFVTWQVLVVAIFAMVAVRFVQRYYIATARELIRINGTTKAPVMNYTAETSQGVVTIRAFN 1091 (1354)
Q Consensus 1012 ~l~~~~~~~~~~i~~i~vi~~~~~~~~l~~i~~~~~~~~i~~~y~~~sr~l~rl~~~~~spi~s~~~Etl~Gl~tIRaf~ 1091 (1354)
.+..++..++.+++.+++++..+|.+.++++..++++..+...+.+..+...+......+....++.|+++|+++||+|+
T Consensus 828 ~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~ 907 (1284)
T 3g5u_A 828 RLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLT 907 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999996999999999999999999999999999999999999999999999998899999846
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 18999999999998886679999999999999999998999999---99-999985289657669999999999999999
Q 000680 1092 MVDRFFQNYLKLVDIDASLFFHTNGVMEWLILRVEALQNLTLFT---AA-LFLVLIPRGYVAPGLVGLSLSYAFTLTGTQ 1167 (1354)
Q Consensus 1092 ~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~---~~-l~~v~~~~g~ls~g~~gl~l~ya~~l~~~l 1167 (1354)
+++++.+++.+..+...+....... |.+....+...+..+. .. +...++..+.++.|.+..++.+......++
T Consensus 908 ~e~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1284)
T 3g5u_A 908 REQKFETMYAQSLQIPYRNAMKKAH---VFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAV 984 (1284)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 5999999999999999999999999---9999999999999999999999999999909806999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCCCCCEEEEECCCEE
Q ss_conf 9999999999988559999998343999999877789999999986609999889984799-998422622886099699
Q 000680 1168 VFLSRWYCYLANYIISVERIKQFMHIPPEPPAIVEDKRPPSSWPFKGRIELRQLKIRYRPN-APLVLKGITCTFSEGTRV 1246 (1354)
Q Consensus 1168 ~~lv~~~~~le~~~~sveRi~ey~~~~~E~~~~~~~~~~~~~wp~~G~Ief~nvsfrY~~~-~~~VLk~Isl~I~~GekV 1246 (1354)
..+.....+++....+++|+.++++.++|.+...+ .+...++.+|.|+|+||+|+|+.. ..++|+|+||+|++||++
T Consensus 985 ~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v 1062 (1284)
T 3g5u_A 985 GQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYST--QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTL 1062 (1284)
T ss_dssp HHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCS--SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEE
T ss_conf 99999999999999999999999838876666555--6654567778579999899779999870020305997699889
Q ss_pred EEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCCEECCCCCCCCCCHHHHCCCC---CCCCHHHHH
Q ss_conf 99879996489999999315489997799969638999947885019064466522345415514999---999999999
Q 000680 1247 GVVGRTGSGKTTLISALFRLVEPAGGSILIDGVDICSMGLKDLRVKLSIIPQEPTLFRGSVRTNLDPL---GLYSDDEIW 1323 (1354)
Q Consensus 1247 gIVGrTGSGKSTL~~~L~Rl~e~~~G~I~IDGvDI~~i~l~~LRs~isiIpQdp~LF~GTIR~NLdp~---~~~tDeeI~ 1323 (1354)
||||+||||||||+++|+|+++|++|+|.+||+|+++++++++|+++++|||||.+|+||||+||.+. ...+|++++
T Consensus 1063 ~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~ 1142 (1284)
T 3g5u_A 1063 ALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIV 1142 (1284)
T ss_dssp EEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHH
T ss_pred EEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHH
T ss_conf 99889999789999999468678997798999980007899997026898778740666699997466877899999999
Q ss_pred HHHHHCCCCHHHHCCCCCCCC----CCCCCCCC
Q ss_conf 999984980588307777678----88644442
Q 000680 1324 KALEKCQLKTTISSLPNKLDS----SGKLFSAA 1352 (1354)
Q Consensus 1324 ~AL~~a~l~~~I~~Lp~gldt----~G~n~s~~ 1352 (1354)
+++++++++++++++|+|||| .|.++|-|
T Consensus 1143 ~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgG 1175 (1284)
T 3g5u_A 1143 RAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGG 1175 (1284)
T ss_dssp HHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHH
T ss_pred HHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHH
T ss_conf 999983959999727042456117888933899
No 3
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=627.20 Aligned_cols=545 Identities=21% Similarity=0.284 Sum_probs=444.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-C-HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999966879999999999999999999999999984137973-3-46----8999999999999999999999999999
Q 000680 270 VITNVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEE-N-LQ----EGLSIVGCLIITKVVESFTQRHCFFGSR 343 (1354)
Q Consensus 270 ~l~~~~~~~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~-~-~~----~g~~~~~~l~~~~~~~~~~~~~~~~~~~ 343 (1354)
.+.+.+++.++...++.++..++..+.|+++..+++....... . .. ..+.++.++++..++..++.....+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (578)
T 4a82_A 7 QFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQ 86 (578)
T ss_dssp HHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99889999999999999999999999999999999999816871146778888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999998548945678899789999999699999628989-9999999999999999999999689999
Q 000680 344 RSGMRMRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFPFW-FHLTWSLALQLFLAIGVLFGVVGLGALP 422 (1354)
Q Consensus 344 ~~g~r~r~~l~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~~i~~~~~~-~~~~w~~plqi~ia~~~L~~~lG~~~l~ 422 (1354)
+.+.++...+...+|+|.++++....++.++|+++|.++.|++++.++... ++.+|..++.+++++++++..-++.+++
T Consensus 87 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 166 (578)
T 4a82_A 87 WTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLA 166 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999987899997689869999999999999999999999999999999999999999996999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999899999999999999999999999999999429999982249999999999999999999999999999
Q 000680 423 GLVLFLICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSEAQLRKAY 502 (1354)
Q Consensus 423 gl~v~~i~~~l~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~i~~~R~~El~~l~~~~~~~~~ 502 (1354)
.++++.+...+...+.+...+.+++.++..+++.+.++|.++|||+||.|+||+.+.++..+.++++.+...+.....+.
T Consensus 167 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (578)
T 4a82_A 167 ALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAY 246 (578)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998249999981664999999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999899999--9999999998728988888889999999999999999999999999999999999999843567996
Q 000680 503 GTVIYWMSPTI--ISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNN 580 (1354)
Q Consensus 503 ~~~~~~~~p~l--v~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~ 580 (1354)
...+......+ +.+..++++.... +.++++.+++.+.++..+..|+..++..+..+.++.+|.+|+.++++.++..+
T Consensus 247 ~~~~~~~~~~~~~~~v~~~g~~~v~~-g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 325 (578)
T 4a82_A 247 SFAAINTVTDIGPIIVIGVGAYLAIS-GSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIK 325 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-TSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999985-99589999999999999999999999999999999999999999976897666
Q ss_pred CHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC--
Q ss_conf 000001235899848998437972799988731126688508808999879998877899888298658873899919--
Q 000680 581 DDVRRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG-- 658 (1354)
Q Consensus 581 ~~~~~~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilGe~~~~~G~v~~~g-- 658 (1354)
+.....+.+...+.++++|.+|+|+.+ +.++|+|+|+++++|+.++|+||+|||||||+++|+|++++.+|+|.++|
T Consensus 326 ~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 404 (578)
T 4a82_A 326 NGVGAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHN 404 (578)
T ss_dssp CCTTCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEE
T ss_pred CCCCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf 787766667778807999999975899-9741343379987999999989999859999999846788999679999998
Q ss_pred -----------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf -----------1999807887898758899723999-9989999999995107988218999963126888877948999
Q 000680 659 -----------SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQ 726 (1354)
Q Consensus 659 -----------~iayv~Q~pwi~~~TireNIlfg~~-~d~~~y~~vi~ac~L~~dl~~lp~GD~T~IGe~G~~LSGGQkq 726 (1354)
+++||+|+||++++|++|||.+|.+ .++++..++++.++++++++.+|+|++|.+||+|.+|||||||
T Consensus 405 ~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~LSgGq~Q 484 (578)
T 4a82_A 405 IKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQ 484 (578)
T ss_dssp GGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHH
T ss_pred HHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCCCHHHHH
T ss_conf 44278999960068992898347645999985279998899999999880959999757330102530688967999999
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998049989998287888699999999999997814995899974894315202979999398488933868998
Q 000680 727 RIQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELL 806 (1354)
Q Consensus 727 Ri~LARAvy~~~di~lLDdp~salD~~~~~~if~~~i~~~l~~kT~Ilvth~~~~l~~~d~i~~l~~G~i~~~G~~~el~ 806 (1354)
|++||||++++|++++||||+|+||+++++.+. +++....+++|+|++||+++.+..||+|++|++|++++.|+++|++
T Consensus 485 rv~lAral~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~el~ 563 (578)
T 4a82_A 485 RLSIARIFLNNPPILILDEATSALDLESESIIQ-EALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELI 563 (578)
T ss_dssp HHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHH-HHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHH
T ss_conf 999999997499999997865457999999999-9999980899799983178999719989999899899988899998
Q ss_pred HCCCHHHHHHH
Q ss_conf 61824899999
Q 000680 807 LAGTAFEQLVN 817 (1354)
Q Consensus 807 ~~~~~~~~l~~ 817 (1354)
+.++.|.++.+
T Consensus 564 ~~~~~~~~~~~ 574 (578)
T 4a82_A 564 AKQGAYEHLYS 574 (578)
T ss_dssp HTTSHHHHHHT
T ss_pred HCCCHHHHHHH
T ss_conf 58838999998
No 4
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=626.81 Aligned_cols=529 Identities=19% Similarity=0.225 Sum_probs=385.9
Q ss_pred HHHHHHHHH---HHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999---99999998413-79733468999999999999999999999999999999999999999999998548
Q 000680 289 RTIAVVVGP---LLLYAFVNYSN-RGEENLQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMRMRSALMVAVYQKQLKL 364 (1354)
Q Consensus 289 ~~~~~~~~P---~ll~~li~~~~-~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~r~r~~l~~~Iy~K~L~l 364 (1354)
..+..++.| +++..+++... ++......+..|+..+++..++..++.....+...+.+.++-..+...+|+|.++.
T Consensus 761 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~ 840 (1321)
T 4f4c_A 761 ATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQ 840 (1321)
T ss_dssp HHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999998751793455667899999999999999999999999999999999999999998887349
Q ss_pred CCCCCC--CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 945678--89978999999969999962898-999999999999999999999996899999999999999989999999
Q 000680 365 SSLGRK--KHSTGEIVNYIAVDAYRMGEFPF-WFHLTWSLALQLFLAIGVLFGVVGLGALPGLVLFLICGLLNVPFAKIL 441 (1354)
Q Consensus 365 s~~~~~--~~~~G~ivNlms~D~~~i~~~~~-~~~~~w~~plqi~ia~~~L~~~lG~~~l~gl~v~~i~~~l~~~~~~~~ 441 (1354)
+-.-.+ ++++|+++|.++.|++.+.+... .+..+....+.++.++++++..-.+.+++.++++.++........+..
T Consensus 841 ~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~ 920 (1321)
T 4f4c_A 841 HIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRF 920 (1321)
T ss_dssp CSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 93332167888488885025059999999999999999986537777022137868999999998889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf 99999999999999999999994299999822499999999999999999999999999999999989999-99999999
Q 000680 442 QKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSEAQLRKAYGTVIYWMSPT-IISSVIFL 520 (1354)
Q Consensus 442 ~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~i~~~R~~El~~l~~~~~~~~~~~~~~~~~p~-lv~~~~f~ 520 (1354)
.+.+.+..+...+......|.++|+++||.|++|+.|.++..+.-+...+...+.....+....+...... ...++.+.
T Consensus 921 ~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1321)
T 4f4c_A 921 TGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRM 1000 (1321)
T ss_dssp SSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998889889999996279888614148899999999999999999999999999999999999999999987
Q ss_pred HHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHCCCCCCCCCEEE
Q ss_conf 99872--8988888889999999999999999999999999999999999999843567-99600000123589984899
Q 000680 521 GCALT--GSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHE-LNNDDVRRISLQKSDRSVKI 597 (1354)
Q Consensus 521 ~~~l~--~~~~Lt~~~vFt~l~lf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e-~~~~~~~~~~~~~~~~~I~~ 597 (1354)
+..++ +...+.+..+|..+..+.....|+..+......+.++..+.+|+.++++.++ .++.. ......+..+.|+|
T Consensus 1001 g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~-~~~~~~~~~g~I~f 1079 (1321)
T 4f4c_A 1001 GLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLS-LAGEKKKLYGKVIF 1079 (1321)
T ss_dssp HHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTC-CCSBCCCCCCCEEE
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCEEEE
T ss_conf 57887537654214789999999987788999999999999999999998999860766577766-77878888881899
Q ss_pred EEEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-------------EEEEEE
Q ss_conf 8437972799988731126688508808999879998877899888298658873899919-------------199980
Q 000680 598 QEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG-------------SIAYVS 664 (1354)
Q Consensus 598 ~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilGe~~~~~G~v~~~g-------------~iayv~ 664 (1354)
+|++|+|+.+++.|+|+|+||++++||.++|||++|||||||+++|+|.+++.+|+|.++| +++|||
T Consensus 1080 ~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~ 1159 (1321)
T 4f4c_A 1080 KNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVS 1159 (1321)
T ss_dssp EEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEEC
T ss_pred EEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEEC
T ss_conf 98798579999882124516998898999998999981999999995686389978999999865499999985459987
Q ss_pred CCCCCCCCCHHHHHHCCC---CCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
Q ss_conf 788789875889972399---99989999999995107988218999963126888877948999999999980499899
Q 000680 665 QTSWIQSGSIRDNILYGK---PMDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQRIQLARAVYNDADIY 741 (1354)
Q Consensus 665 Q~pwi~~~TireNIlfg~---~~d~~~y~~vi~ac~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqRi~LARAvy~~~di~ 741 (1354)
|+|.+++|||||||.+|. ++++++..++++.|++++.++.||+|.+|.|||+|.||||||||||+||||++++|+|+
T Consensus 1160 Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~IL 1239 (1321)
T 4f4c_A 1160 QEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKIL 1239 (1321)
T ss_dssp SSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEE
T ss_pred CCCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEE
T ss_conf 89973272399997454999999999999999982984999717678999823889156999999999999997179989
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHH
Q ss_conf 982878886999999999999978149958999748943152029799993984889338689986182489999972
Q 000680 742 LFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLLAGTAFEQLVNAH 819 (1354)
Q Consensus 742 lLDdp~salD~~~~~~if~~~i~~~l~~kT~Ilvth~~~~l~~~d~i~~l~~G~i~~~G~~~el~~~~~~~~~l~~~~ 819 (1354)
+|||||||||+++++.|. +.+....++||+|+|+|+++.+.+||+|+||++|+|+|.|+|+||+++++.|.++++.+
T Consensus 1240 iLDEaTSaLD~~tE~~Iq-~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~g~y~~L~~~Q 1316 (1321)
T 4f4c_A 1240 LLDEATSALDTESEKVVQ-EALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEKGAYYKLTQKQ 1316 (1321)
T ss_dssp EEESCCCSTTSHHHHHHH-HHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC----------
T ss_pred EEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHH
T ss_conf 996811157899999999-99999739998999606899999699999998989999888899984980999999999
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=616.76 Aligned_cols=542 Identities=20% Similarity=0.212 Sum_probs=443.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99668799999999999999999999999999841379733468999999999999999999999999999999999999
Q 000680 273 NVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEENLQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMRMRSA 352 (1354)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~r~r~~ 352 (1354)
+.+++.++...++.++..++..+.|+++..+++....+.. ...-..++.++++..++..++.....+...+.+.++...
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (598)
T 3qf4_B 33 RPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR-FDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFR 111 (598)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC-GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999973688-899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999854894567889978999999969999962898-99999999999999999999999689999999999999
Q 000680 353 LMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFPF-WFHLTWSLALQLFLAIGVLFGVVGLGALPGLVLFLICG 431 (1354)
Q Consensus 353 l~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~~i~~~~~-~~~~~w~~plqi~ia~~~L~~~lG~~~l~gl~v~~i~~ 431 (1354)
+...+|+|.++++....++.++|+++|.++.|++++.++.. .+..++..++.++.++++++..-++.+++.++++.+..
T Consensus 112 lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~l~~ 191 (598)
T 3qf4_B 112 LRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTV 191 (598)
T ss_dssp HHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999977999997688889999999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99899999999999999999999999999999429999982249999999999999999999999999999999998999
Q 000680 432 LLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSEAQLRKAYGTVIYWMSP 511 (1354)
Q Consensus 432 ~l~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~i~~~R~~El~~l~~~~~~~~~~~~~~~~~p 511 (1354)
.+...+.+...+.+++..+..+++.+.++|.++||++||.|+||+.+.++..+.+++..+...+.....+..........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (598)
T 3qf4_B 192 LITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVN 271 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999997379999974870999999999999999999999999999999999999
Q ss_pred HH--HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCC
Q ss_conf 99--9999999998728988888889999999999999999999999999999999999999843567996000001235
Q 000680 512 TI--ISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNNDDVRRISLQ 589 (1354)
Q Consensus 512 ~l--v~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~ 589 (1354)
.+ +.+..++++.... +.++++.+++.+.++..+..|+..++..+..+.++.+|.+|+.++++.++..+.. ...+.+
T Consensus 272 ~~~~~~~~~~g~~l~~~-g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~-~~~~~~ 349 (598)
T 3qf4_B 272 NLGFALISGFGGWLALK-DIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDP-DAVELR 349 (598)
T ss_dssp HHHHHHHHHHHHHHGGG-TSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCS-SCCCCC
T ss_pred HHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCC
T ss_conf 99999999999999985-9978999999999999999999999999999999999999999997688777777-777777
Q ss_pred CCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-----------
Q ss_conf 899848998437972799988731126688508808999879998877899888298658873899919-----------
Q 000680 590 KSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG----------- 658 (1354)
Q Consensus 590 ~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilGe~~~~~G~v~~~g----------- 658 (1354)
+..+.|+++|.+|+|+. +.++|+|+|+++++|+.++|+||+|||||||+++|+|++++.+|+|.++|
T Consensus 350 ~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~ 427 (598)
T 3qf4_B 350 EVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSL 427 (598)
T ss_dssp SCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEEGGGSCHHHH
T ss_pred CCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHH
T ss_conf 77771899998997799--9860122279986998899989999969999999945857998089999998301889999
Q ss_pred --EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf --1999807887898758899723999-9989999999995107988218999963126888877948999999999980
Q 000680 659 --SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQRIQLARAVY 735 (1354)
Q Consensus 659 --~iayv~Q~pwi~~~TireNIlfg~~-~d~~~y~~vi~ac~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqRi~LARAvy 735 (1354)
+++||+|+|+++++|++|||.+|.+ .+++++.++++.++++++++.+|+|++|.+||+|.+||||||||++||||++
T Consensus 428 r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Qrv~iAral~ 507 (598)
T 3qf4_B 428 RSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFL 507 (598)
T ss_dssp HHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 84108990798232463999974479999999999999996978889746453236422788987999999999999996
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHH
Q ss_conf 49989998287888699999999999997814995899974894315202979999398488933868998618248999
Q 000680 736 NDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLLAGTAFEQL 815 (1354)
Q Consensus 736 ~~~di~lLDdp~salD~~~~~~if~~~i~~~l~~kT~Ilvth~~~~l~~~d~i~~l~~G~i~~~G~~~el~~~~~~~~~l 815 (1354)
++|++++||||+|+||+++++.+.+ ++....+++|+|++||+++.+..||+|++|++|++++.|+++|+++.++.|.++
T Consensus 508 ~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 586 (598)
T 3qf4_B 508 ANPKILILDEATSNVDTKTEKSIQA-AMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYEL 586 (598)
T ss_dssp TCCSEEEECCCCTTCCHHHHHHHHH-HHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHHTTCHHHHH
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHH
T ss_conf 4999999989766799999999999-999980899899994277899719989999899999877899998678779999
Q ss_pred HHHHH
Q ss_conf 99722
Q 000680 816 VNAHR 820 (1354)
Q Consensus 816 ~~~~~ 820 (1354)
...+.
T Consensus 587 ~~~~~ 591 (598)
T 3qf4_B 587 FTSQY 591 (598)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99976
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=614.43 Aligned_cols=545 Identities=20% Similarity=0.240 Sum_probs=426.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999966879999999999999999999999999984137973346899999999999999999999999999999999
Q 000680 269 KVITNVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEENLQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMR 348 (1354)
Q Consensus 269 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~r 348 (1354)
+.+++.+++.+++..++.++..++..+.|+++..+++...... +....+.++..+++..++..++..-..+...+.+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (587)
T 3qf4_A 15 ARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARG-DFSLVLKTGILMLIVALIGAVGGIGCTVFASYASQN 93 (587)
T ss_dssp GGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999987369-879999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998548945678899789999999699999628989-999999999999999999999968999999999
Q 000680 349 MRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEFPFW-FHLTWSLALQLFLAIGVLFGVVGLGALPGLVLF 427 (1354)
Q Consensus 349 ~r~~l~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~~i~~~~~~-~~~~w~~plqi~ia~~~L~~~lG~~~l~gl~v~ 427 (1354)
+...+...+|+|.++++....++.++|+++|.++.|++++.++... +..++..++.++.++++++..-...+++.++++
T Consensus 94 ~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~ 173 (587)
T 3qf4_A 94 FGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSVLIFLI 173 (587)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999997889799765888999999999999999999999999999999999999999999899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999899999999999999999999999999999429999982249999999999----9999999999999999999
Q 000680 428 LICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIES----RREKEFKWLSEAQLRKAYG 503 (1354)
Q Consensus 428 ~i~~~l~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~i~~----~R~~El~~l~~~~~~~~~~ 503 (1354)
.+...+...+.+...+..++.++..+++.+.++|.++|||+||.|+||+.+.++..+ .|+.+.+..+.........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (587)
T 3qf4_A 174 PPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVFALPLF 253 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999855999998621499999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 99998999999999999998728988888889999999999999999999999999999999999999843567996000
Q 000680 504 TVIYWMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNNDDV 583 (1354)
Q Consensus 504 ~~~~~~~p~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 583 (1354)
.++ .....+.+..++++.... +.++.+.+++.+.++..+..|+..++..+..+.++.+|.+|+.++++.++..++..
T Consensus 254 ~~~--~~~~~~~vl~~g~~~v~~-g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~ 330 (587)
T 3qf4_A 254 IFI--VNMGMIAVLWFGGVLVRN-NQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEEAD 330 (587)
T ss_dssp HHH--HHHHHHHHHHHHHHHHHT-TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCCT
T ss_pred HHH--HHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999--999999999999999984-99389999999999999999999999999999999999999999976897657887
Q ss_pred HHCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-----
Q ss_conf 001235899848998437972799988731126688508808999879998877899888298658873899919-----
Q 000680 584 RRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG----- 658 (1354)
Q Consensus 584 ~~~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilGe~~~~~G~v~~~g----- 658 (1354)
...+.++..+.|+++|.+|+|+.+ +.++|+|+||++++|+.++|+||+|||||||+++|+|.+++.+|+|.++|
T Consensus 331 ~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~i~~ 409 (587)
T 3qf4_A 331 NALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRT 409 (587)
T ss_dssp TCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSSBGGG
T ss_pred CCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCC
T ss_conf 765668888807997889984899-9764211179986998899989999979999999927866998679899998340
Q ss_pred --------EEEEEECCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf --------1999807887898758899723999-9989999999995107988218999963126888877948999999
Q 000680 659 --------SIAYVSQTSWIQSGSIRDNILYGKP-MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQRIQ 729 (1354)
Q Consensus 659 --------~iayv~Q~pwi~~~TireNIlfg~~-~d~~~y~~vi~ac~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqRi~ 729 (1354)
+++||+|+|+++++|++|||.+|.+ .+++++.++++.|+++++++.+|+|++|.+||+|.+||||||||++
T Consensus 410 ~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqrQrv~ 489 (587)
T 3qf4_A 410 VKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQRLS 489 (587)
T ss_dssp BCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHHHHHH
T ss_pred CCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHH
T ss_conf 78999984138977898676755999985248899999999999996849999756531212751898992999999999
Q ss_pred HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECCHHHHHHCC
Q ss_conf 99998049989998287888699999999999997814995899974894315202979999398488933868998618
Q 000680 730 LARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLLAG 809 (1354)
Q Consensus 730 LARAvy~~~di~lLDdp~salD~~~~~~if~~~i~~~l~~kT~Ilvth~~~~l~~~d~i~~l~~G~i~~~G~~~el~~~~ 809 (1354)
||||++++|++++||||+|+||+++++++.+ .+....+++|+|++||+++.+..||+|++|++|+|++.|+++|+++.+
T Consensus 490 lARal~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~~~~ 568 (587)
T 3qf4_A 490 IARALVKKPKVLILDDCTSSVDPITEKRILD-GLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELLEHC 568 (587)
T ss_dssp HHHHHHTCCSEEEEESCCTTSCHHHHHHHHH-HHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHHHHC
T ss_pred HHHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCC
T ss_conf 9999972999999979754479999999999-999867999899982276889819989999899899978899998678
Q ss_pred CHHHHHHHHH
Q ss_conf 2489999972
Q 000680 810 TAFEQLVNAH 819 (1354)
Q Consensus 810 ~~~~~l~~~~ 819 (1354)
+.|.++...+
T Consensus 569 ~~~~~~~~~~ 578 (587)
T 3qf4_A 569 KPYREIYESQ 578 (587)
T ss_dssp HHHHHHHHHH
T ss_pred CHHHHHHHHH
T ss_conf 3999999998
No 7
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=589.69 Aligned_cols=541 Identities=18% Similarity=0.227 Sum_probs=433.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99996687999999999999999999999999998413797334689999999999999999999999999999999999
Q 000680 271 ITNVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEENLQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMRMR 350 (1354)
Q Consensus 271 l~~~~~~~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~r~r 350 (1354)
..+.+++.++...++.++..++..+.|+++..+++...... .....+.++.++++..++..++.....+...+.+.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (582)
T 3b60_A 19 TIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKT-DRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVV 97 (582)
T ss_dssp HHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTST-THHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999884368-65799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998548945678899789999999699999628-98999999999999999999999996899999999999
Q 000680 351 SALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEF-PFWFHLTWSLALQLFLAIGVLFGVVGLGALPGLVLFLI 429 (1354)
Q Consensus 351 ~~l~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~~i~~~-~~~~~~~w~~plqi~ia~~~L~~~lG~~~l~gl~v~~i 429 (1354)
..+...+|+|.++++....++.++|+++|.++.|++++.++ ...+..++..++.+++++++++..-.+.+++.++++.+
T Consensus 98 ~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l 177 (582)
T 3b60_A 98 MTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPI 177 (582)
T ss_dssp HHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999809999978898658999999879999999999999999999999999999999809999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998999999999999999999999999999994299999822499999999----99999999999999999999999
Q 000680 430 CGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLI----ESRREKEFKWLSEAQLRKAYGTV 505 (1354)
Q Consensus 430 ~~~l~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~i----~~~R~~El~~l~~~~~~~~~~~~ 505 (1354)
...+...+.+...+..++..+..+++.+.+.|.++|+++||.|++|+.+.++. .+.++.+.+..+..........+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (582)
T 3b60_A 178 VSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQL 257 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999996199999837689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 99899999999999999872898888888999999999999999999999999999999999999984356799600000
Q 000680 506 IYWMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNNDDVRR 585 (1354)
Q Consensus 506 ~~~~~p~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 585 (1354)
+...... .+..++++... ++.++++.+++.+.++..+..|+..++..+..+.++.++.+|+.++++.++..++. .
T Consensus 258 ~~~~~~~--~~~~~g~~~v~-~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~--~ 332 (582)
T 3b60_A 258 IASLALA--FVLYAASFPSV-MDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEG--K 332 (582)
T ss_dssp HHHHHHH--HHHHHHHSSST-TSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCCC--C
T ss_pred HHHHHHH--HHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--C
T ss_conf 9999999--99999999998-49998999999999999999999999999999999999999999997599876677--7
Q ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-------
Q ss_conf 1235899848998437972799988731126688508808999879998877899888298658873899919-------
Q 000680 586 ISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG------- 658 (1354)
Q Consensus 586 ~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilGe~~~~~G~v~~~g------- 658 (1354)
.+.++..+.++++|.+|+|+.+ +.++|+|+|+++++|+.++|+||+|||||||+++|.|.++|.+|+|.++|
T Consensus 333 ~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~ 411 (582)
T 3b60_A 333 RVIDRATGDLEFRNVTFTYPGR-EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYT 411 (582)
T ss_dssp BCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBC
T ss_pred CCCCCCCCCEEEEEEEEECCCC-CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEECCCCC
T ss_conf 7777888847999889973999-974415615997699989998999998999999986106898976979999823069
Q ss_pred ------EEEEEECCCCCCCCCHHHHHHCCC--CCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf ------199980788789875889972399--999899999999951079882189999631268888779489999999
Q 000680 659 ------SIAYVSQTSWIQSGSIRDNILYGK--PMDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQRIQL 730 (1354)
Q Consensus 659 ------~iayv~Q~pwi~~~TireNIlfg~--~~d~~~y~~vi~ac~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqRi~L 730 (1354)
+++|++|+|+++++|++|||.+|. ..++++++++++.+++++.++.+|+|++|.+||+|.+||||||||++|
T Consensus 412 ~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq~qrl~i 491 (582)
T 3b60_A 412 LASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAI 491 (582)
T ss_dssp HHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHHHH
T ss_pred HHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999608088068747787899998545999989999999999849799998450411451147988789999999999
Q ss_pred HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECCHHHHHHCCC
Q ss_conf 99980499899982878886999999999999978149958999748943152029799993984889338689986182
Q 000680 731 ARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLLAGT 810 (1354)
Q Consensus 731 ARAvy~~~di~lLDdp~salD~~~~~~if~~~i~~~l~~kT~Ilvth~~~~l~~~d~i~~l~~G~i~~~G~~~el~~~~~ 810 (1354)
|||++++|++++||||+|+||+++++.+.+ .+....+++|+|++||+++.+..||+|++|++|++++.|+++|+++.++
T Consensus 492 Aral~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 570 (582)
T 3b60_A 492 ARALLRDSPILILDEATSALDTESERAIQA-ALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHG 570 (582)
T ss_dssp HHHHHHCCSEEEEETTTSSCCHHHHHHHHH-HHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHHHHHTS
T ss_pred HHHHHHCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCC
T ss_conf 999972899899978655579899999999-9999967997999945477898599899997888988458999987698
Q ss_pred HHHHHHHHH
Q ss_conf 489999972
Q 000680 811 AFEQLVNAH 819 (1354)
Q Consensus 811 ~~~~l~~~~ 819 (1354)
.|.++.+.+
T Consensus 571 ~~~~~~~~q 579 (582)
T 3b60_A 571 VYAQLHKMQ 579 (582)
T ss_dssp SHHHHHHHT
T ss_pred HHHHHHHHH
T ss_conf 899999975
No 8
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=588.18 Aligned_cols=541 Identities=18% Similarity=0.224 Sum_probs=434.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99996687999999999999999999999999998413797334689999999999999999999999999999999999
Q 000680 271 ITNVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEENLQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMRMR 350 (1354)
Q Consensus 271 l~~~~~~~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~r~r 350 (1354)
+.+.+++.+....++.++..++..+.|+++..+++...... .....+.++.++++..++..++.....+...+.+.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (582)
T 3b5x_A 19 YIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNA-ESNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNVV 97 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98899999999999999999999999999999999986468-66799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998548945678899789999999699999628-98999999999999999999999996899999999999
Q 000680 351 SALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEF-PFWFHLTWSLALQLFLAIGVLFGVVGLGALPGLVLFLI 429 (1354)
Q Consensus 351 ~~l~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~~i~~~-~~~~~~~w~~plqi~ia~~~L~~~lG~~~l~gl~v~~i 429 (1354)
..+...+|+|.++++....++.++|+++|.++.|++++.++ ...+..++..++.+++++++++..-.+.+++.++++.+
T Consensus 98 ~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l 177 (582)
T 3b5x_A 98 MQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPV 177 (582)
T ss_pred HHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999869999977898789999999889999999999999999999999999999999829999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999899999999999999999999999999999429999982249999999----999999999999999999999999
Q 000680 430 CGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSL----IESRREKEFKWLSEAQLRKAYGTV 505 (1354)
Q Consensus 430 ~~~l~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~----i~~~R~~El~~l~~~~~~~~~~~~ 505 (1354)
...+...+.+...+..++..+..+++.+.+.|.++|+|+||.|++|+.+.++ ..+.++.+.+..+..........+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (582)
T 3b5x_A 178 VAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQM 257 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999995199999708759999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 99899999999999999872898888888999999999999999999999999999999999999984356799600000
Q 000680 506 IYWMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNNDDVRR 585 (1354)
Q Consensus 506 ~~~~~p~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 585 (1354)
+...... .+..++++.... +.++++.+++.+.++..+..|+..++..+..+.++.++.+|+.++++.++..++. .
T Consensus 258 ~~~~~~~--~i~~~g~~~v~~-g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~--~ 332 (582)
T 3b5x_A 258 IASLALF--AVLFLASVDSIR-AELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDNG--K 332 (582)
T ss_pred HHHHHHH--HHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--C
T ss_conf 9999999--999999999985-9988999999999999999999999999999999999999999997589767777--7
Q ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-------
Q ss_conf 1235899848998437972799988731126688508808999879998877899888298658873899919-------
Q 000680 586 ISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG------- 658 (1354)
Q Consensus 586 ~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilGe~~~~~G~v~~~g------- 658 (1354)
.+.++..+.++++|.+|+|+.+ +.++|+|+|+++++|+.++|+||+|||||||+++|.|.++|.+|+|.++|
T Consensus 333 ~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~ 411 (582)
T 3b5x_A 333 YEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYK 411 (582)
T ss_pred CCCCCCCCEEEEEEEEEECCCC-CCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHHHCC
T ss_conf 7777788828999989972899-865400416998799989998999997999999996577899987989999856388
Q ss_pred ------EEEEEECCCCCCCCCHHHHHHCCC--CCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf ------199980788789875889972399--999899999999951079882189999631268888779489999999
Q 000680 659 ------SIAYVSQTSWIQSGSIRDNILYGK--PMDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQRIQL 730 (1354)
Q Consensus 659 ------~iayv~Q~pwi~~~TireNIlfg~--~~d~~~y~~vi~ac~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqRi~L 730 (1354)
.++||+|+|+++++|++|||.+|. ..++++++++++.+++++.++.+|+|++|.+||+|.+||||||||++|
T Consensus 412 ~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq~qr~~i 491 (582)
T 3b5x_A 412 LTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAI 491 (582)
T ss_pred HHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHH
T ss_conf 99996485898279905310299998566889999999999999879899998476533451068888479999999999
Q ss_pred HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECCHHHHHHCCC
Q ss_conf 99980499899982878886999999999999978149958999748943152029799993984889338689986182
Q 000680 731 ARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLLAGT 810 (1354)
Q Consensus 731 ARAvy~~~di~lLDdp~salD~~~~~~if~~~i~~~l~~kT~Ilvth~~~~l~~~d~i~~l~~G~i~~~G~~~el~~~~~ 810 (1354)
|||++++|++++||||+|+||+++++.+.+ .+....+++|+|++||+++.+..||+|++|++|++++.|+++|+++.++
T Consensus 492 Aral~~~p~illlDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 570 (582)
T 3b5x_A 492 ARALLRDAPVLILDEATSALDTESERAIQA-ALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDG 570 (582)
T ss_pred HHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCC
T ss_conf 999974999999978544689999999999-9999728998999936889998199899998998999778999984885
Q ss_pred HHHHHHHHH
Q ss_conf 489999972
Q 000680 811 AFEQLVNAH 819 (1354)
Q Consensus 811 ~~~~l~~~~ 819 (1354)
.|.++.+.+
T Consensus 571 ~~~~~~~~q 579 (582)
T 3b5x_A 571 AYAQLHRIQ 579 (582)
T ss_pred HHHHHHHHH
T ss_conf 899999986
No 9
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=586.77 Aligned_cols=543 Identities=20% Similarity=0.213 Sum_probs=422.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999668799999999999999999999999999841379-7334-6899999999999999999999999999999999
Q 000680 271 ITNVYLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRG-EENL-QEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMR 348 (1354)
Q Consensus 271 l~~~~~~~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~-~~~~-~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~r 348 (1354)
+.+.+++.++...++.++..++..+.|+++..+++..... .... ..-+.++..+++..++..++.....+...+.+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (595)
T 2yl4_A 13 LAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQR 92 (595)
T ss_dssp HHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98878999999999999999999999999999999997357402667999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998548945678899789999999699999628-989999999999999999999999968999999999
Q 000680 349 MRSALMVAVYQKQLKLSSLGRKKHSTGEIVNYIAVDAYRMGEF-PFWFHLTWSLALQLFLAIGVLFGVVGLGALPGLVLF 427 (1354)
Q Consensus 349 ~r~~l~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~~i~~~-~~~~~~~w~~plqi~ia~~~L~~~lG~~~l~gl~v~ 427 (1354)
+...+...+|+|.++++....++.++|+++|.++.|++++.++ ...+..++..++.+++++++++..-.+.+++.++++
T Consensus 93 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~ 172 (595)
T 2yl4_A 93 IVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLSVV 172 (595)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998199999777984889999999999999999999999999999999999999998199999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999998999999999999999999999999999994299999822499999999----999999999999999999999
Q 000680 428 LICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLI----ESRREKEFKWLSEAQLRKAYG 503 (1354)
Q Consensus 428 ~i~~~l~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~i----~~~R~~El~~l~~~~~~~~~~ 503 (1354)
.+...+...+.+...+..++..+..++..+.+.|.++||++||.|++|+.+.++. .+.++.+.+..+.........
T Consensus 173 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (595)
T 2yl4_A 173 PPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGAT 252 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999811999998375699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 99998999999999999998728988888889999999999999999999999999999999999999843567996000
Q 000680 504 TVIYWMSPTIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHELNNDDV 583 (1354)
Q Consensus 504 ~~~~~~~p~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 583 (1354)
.++... ..+.+..++++.... +.++++.+++.+.+...+..|+..++..+..+.++.++.+|+.++++.++..++..
T Consensus 253 ~~~~~~--~~~~~~~~g~~~v~~-g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~ 329 (595)
T 2yl4_A 253 GLSGNL--IVLSVLYKGGLLMGS-AHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFNE 329 (595)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHT-TSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCSSC
T ss_pred HHHHHH--HHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999--999999999999986-99789999999999999999999999999999999999999999983897667777
Q ss_pred HHCCCCCCCCC-EEEEEEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC----
Q ss_conf 00123589984-8998437972799988731126688508808999879998877899888298658873899919----
Q 000680 584 RRISLQKSDRS-VKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG---- 658 (1354)
Q Consensus 584 ~~~~~~~~~~~-I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilGe~~~~~G~v~~~g---- 658 (1354)
...+.++..+. |+++|.+|+|+.+++.++|+|+|+++++|+.++|+||+|||||||+++|.|.++|.+|+|.++|
T Consensus 330 ~~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~i~ 409 (595)
T 2yl4_A 330 GVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIR 409 (595)
T ss_dssp SBCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEETTEETT
T ss_pred CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHH
T ss_conf 87777678998389998899858998881201127998499889998999997999999982585789837999999811
Q ss_pred ---------EEEEEECCCCCCCCCHHHHHHCCCC----CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf ---------1999807887898758899723999----998999999999510798821899996312688887794899
Q 000680 659 ---------SIAYVSQTSWIQSGSIRDNILYGKP----MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQK 725 (1354)
Q Consensus 659 ---------~iayv~Q~pwi~~~TireNIlfg~~----~d~~~y~~vi~ac~L~~dl~~lp~GD~T~IGe~G~~LSGGQk 725 (1354)
+++||+|+|+++++|++|||.+|.+ .++++++++++.++++++++.+|+|++|.+||+|.+||||||
T Consensus 410 ~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~LSgGq~ 489 (595)
T 2yl4_A 410 QLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQK 489 (595)
T ss_dssp TBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCCCCHHHH
T ss_pred HCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHH
T ss_conf 17999997322898368832687799998405877665689999999998697999974732013501688786899999
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999804998999828788869999999999999781499589997489431520297999939848893386899
Q 000680 726 QRIQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQEL 805 (1354)
Q Consensus 726 qRi~LARAvy~~~di~lLDdp~salD~~~~~~if~~~i~~~l~~kT~Ilvth~~~~l~~~d~i~~l~~G~i~~~G~~~el 805 (1354)
||++||||++++|++++||||+|+||+++.+.+. +.+....+++|+|++||+++.+..||+|++|++|++++.|+++|+
T Consensus 490 qrv~iAral~~~p~illlDEpts~LD~~~~~~i~-~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 568 (595)
T 2yl4_A 490 QRIAIARALLKNPKILLLDEATSALDAENEYLVQ-EALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEEL 568 (595)
T ss_dssp HHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHH-HHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEECSCC-
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHH
T ss_conf 9999999997599999998866689989999999-999999659979999468789975998999989989997889999
Q ss_pred HHC-CCHHHHHHH
Q ss_conf 861-824899999
Q 000680 806 LLA-GTAFEQLVN 817 (1354)
Q Consensus 806 ~~~-~~~~~~l~~ 817 (1354)
++. ++.|.++.+
T Consensus 569 ~~~~~~~~~~~~~ 581 (595)
T 2yl4_A 569 LSKPNGIYRKLMN 581 (595)
T ss_dssp -----C-------
T ss_pred HHCCCHHHHHHHH
T ss_conf 7478729999999
No 10
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=538.30 Aligned_cols=542 Identities=19% Similarity=0.226 Sum_probs=390.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66879999999999999999999999999984137973--3-46899999999999999999999999999999999999
Q 000680 275 YLKENIFIAICALLRTIAVVVGPLLLYAFVNYSNRGEE--N-LQEGLSIVGCLIITKVVESFTQRHCFFGSRRSGMRMRS 351 (1354)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~--~-~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~r~r~ 351 (1354)
.|+.+++..++.++..++..+.|+++..+++....... . ......++..+++..++..++.....+...+.+.++..
T Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~ 782 (1284)
T 3g5u_A 703 EWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTK 782 (1284)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999999999999999999999855685033677999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q ss_conf 999999999854894567--8899789999999699999628989-9999999999999999999---999689999999
Q 000680 352 ALMVAVYQKQLKLSSLGR--KKHSTGEIVNYIAVDAYRMGEFPFW-FHLTWSLALQLFLAIGVLF---GVVGLGALPGLV 425 (1354)
Q Consensus 352 ~l~~~Iy~K~L~ls~~~~--~~~~~G~ivNlms~D~~~i~~~~~~-~~~~w~~plqi~ia~~~L~---~~lG~~~l~gl~ 425 (1354)
.+...+|+|.++.+..-. .+.++|+++|.++.|++.+.+.... +..+....+.++.++++++ +.+++.+++.++
T Consensus 783 ~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p 862 (1284)
T 3g5u_A 783 RLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVP 862 (1284)
T ss_dssp HHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998399888757899889999999999999999999999999999999999999999996999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999899999999999999999999999999999429999982249999999999999999999999999999999
Q 000680 426 LFLICGLLNVPFAKILQKCQSEFMIAQDERLRSTSEILNNMKIIKLQSWEEKFKSLIESRREKEFKWLSEAQLRKAYGTV 505 (1354)
Q Consensus 426 v~~i~~~l~~~~~~~~~~~q~~~m~~~D~Ri~~~~EiL~~Ik~IK~~awE~~f~~~i~~~R~~El~~l~~~~~~~~~~~~ 505 (1354)
++++ +.....+...+...+..+..++..+...|.++|+++||.+++|+.+.++..+.-+...+...+.....+....
T Consensus 863 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (1284)
T 3g5u_A 863 IIAI---AGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFS 939 (1284)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999---9999999999999999999999999999999889999984659999999999999999999999999999999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCHH
Q ss_conf 998999-9999999999987289888888899999999999999999999999999999999999998435679-96000
Q 000680 506 IYWMSP-TIISSVIFLGCALTGSAPLNASTIFTVLATLRSMGEPVRMIPEALSIMIQVKVSFDRINAFLLDHEL-NNDDV 583 (1354)
Q Consensus 506 ~~~~~p-~lv~~~~f~~~~l~~~~~Lt~~~vFt~l~lf~~L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~-~~~~~ 583 (1354)
+..... .....+.+.+..++..+.++.+.++..+..+.....|+..+......+.++..+.+|+.+++..++. ++...
T Consensus 940 ~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~ 1019 (1284)
T 3g5u_A 940 FTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYST 1019 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999999999999999990980699999999999999999999999999999999999999999838876666555
Q ss_pred HHCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-----
Q ss_conf 001235899848998437972799988731126688508808999879998877899888298658873899919-----
Q 000680 584 RRISLQKSDRSVKIQEGNFSWDPELAIPTLRGVNLDIKWAQKIAVCGSVGAGKSSLLYAILGEIPKISGTVNLYG----- 658 (1354)
Q Consensus 584 ~~~~~~~~~~~I~~~~~~f~w~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~ilGe~~~~~G~v~~~g----- 658 (1354)
.........+.|+++|.+|+|+..++.++|+|+||++++||.++|+|++|||||||+++|.|.+++.+|+|.++|
T Consensus 1020 ~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~ 1099 (1284)
T 3g5u_A 1020 QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQ 1099 (1284)
T ss_dssp SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTS
T ss_pred CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCC
T ss_conf 66545677785799998997799998700203059976998899988999978999999946867899779899998000
Q ss_pred --------EEEEEECCCCCCCCCHHHHHHCCCC---CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf --------1999807887898758899723999---99899999999951079882189999631268888779489999
Q 000680 659 --------SIAYVSQTSWIQSGSIRDNILYGKP---MDKARYDKAIKACALDKDINNFDHGDLTEIGQRGLNLSGGQKQR 727 (1354)
Q Consensus 659 --------~iayv~Q~pwi~~~TireNIlfg~~---~d~~~y~~vi~ac~L~~dl~~lp~GD~T~IGe~G~~LSGGQkqR 727 (1354)
+++||||+|.++++||+|||.+|.+ .++++..++++.+.+++.++.+|+|.+|.|||+|.+||||||||
T Consensus 1100 ~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qr 1179 (1284)
T 3g5u_A 1100 LNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQR 1179 (1284)
T ss_dssp SCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHH
T ss_pred CCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 78999970268987787406666999974668778999999999999839599997270424561178889338999999
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECCHHHHHH
Q ss_conf 99999980499899982878886999999999999978149958999748943152029799993984889338689986
Q 000680 728 IQLARAVYNDADIYLFDDPFSAVDAHTAATLFNECVMAALEKKTVILVTHQVEFLSEVDRILVLEGGQITQSGNYQELLL 807 (1354)
Q Consensus 728 i~LARAvy~~~di~lLDdp~salD~~~~~~if~~~i~~~l~~kT~Ilvth~~~~l~~~d~i~~l~~G~i~~~G~~~el~~ 807 (1354)
++||||++++|+|++||||+|+||+++.+.+.+ .+....+++|+|+|||+++.+..||+|++|++|+|++.|+++|+++
T Consensus 1180 v~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~-~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~ 1258 (1284)
T 3g5u_A 1180 IAIARALVRQPHILLLDEATSALDTESEKVVQE-ALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLA 1258 (1284)
T ss_dssp HHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHH-HHHHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH
T ss_conf 999999974999999868755579999999999-9998679998999955879998099899998998999778999984
Q ss_pred CCCHHHHHHHHHH
Q ss_conf 1824899999722
Q 000680 808 AGTAFEQLVNAHR 820 (1354)
Q Consensus 808 ~~~~~~~l~~~~~ 820 (1354)
.++.|.++++.+.
T Consensus 1259 ~~g~y~~l~~~q~ 1271 (1284)
T 3g5u_A 1259 QKGIYFSMVSVQA 1271 (1284)
T ss_dssp SCSHHHHHHHHHC
T ss_pred CCCHHHHHHHHHH
T ss_conf 7777999999976
Done!