BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000682
(1353 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LFQ3|SNL2_ARATH Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana
GN=SNL2 PE=1 SV=2
Length = 1367
Score = 1439 bits (3725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 765/1318 (58%), Positives = 949/1318 (72%), Gaps = 114/1318 (8%)
Query: 1 MKRIRDDVYG-GSQFKRPLTTAPPRGESYGLSPQLPGTGAGGGGGAGGGGGAGAGGGSGV 59
MKRIRDD+Y GSQFKRPL ++ RGESY SP G
Sbjct: 1 MKRIRDDIYATGSQFKRPLGSS--RGESYEQSPITGGGSI-------------------- 38
Query: 60 GGGGGGMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGV 119
G +QKLTT DALTYLKEVK+MFQDQR+KYDMFLEVMKDFKAQ+TDT+GV
Sbjct: 39 -------GEGGINTQKLTTDDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGV 91
Query: 120 IARVKDLFKGHNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHND 179
I+RVK+LFKGHNNLIFGFNTFLPKG+EITLD+ EAP KKTVEFEEAI+FVNKIK RF ++
Sbjct: 92 ISRVKELFKGHNNLIFGFNTFLPKGFEITLDDVEAPSKKTVEFEEAISFVNKIKTRFQHN 151
Query: 180 EHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPF 239
E VYKSFLEILNMYRK++KDI EVY+EV++LFEDH+DLLEEFTRFLPD+ A +
Sbjct: 152 ELVYKSFLEILNMYRKDNKDITEVYNEVSTLFEDHSDLLEEFTRFLPDSLAPHTEAQL-- 209
Query: 240 VRNSTQRGNERSAGIPPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEKLMIKMQKE 299
+R+ QR ++R +G P +R+M M+K RRR+R S DRD SVDR +++D+K M+KM ++
Sbjct: 210 LRSQAQRYDDRGSGPPLVRRMFMEKDRRRERTVASRGDRDHSVDRSDLNDDKSMVKMHRD 269
Query: 300 QRRRAEKENRDRRNRDQDDREIEHDNNRDFNLQRFPDKKKSIKKVEGFGANSSLASYDDK 359
QR+R +K+NR+RR+RD +D E E DN LQ F +K+KS +++EGF A S AS+ +K
Sbjct: 270 QRKRVDKDNRERRSRDLEDGEAEQDN-----LQHFSEKRKSSRRMEGFEAYSGPASHSEK 324
Query: 360 DALKSIYNQGFIFCDKVKEKLCS-DDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMD 418
+ LKS+YNQ F+FC+KVKE+LCS DDYQAFLKCL+++SNGII+R DLQNLV+D+LGK+ D
Sbjct: 325 NNLKSMYNQAFLFCEKVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPD 384
Query: 419 LMDEFNHFFERCENIDGF--LAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKD 476
LMDEFN FFERCE+IDGF LAGVMSKKSL ++ ++SRSVK E+KDREHKR++E KEK+
Sbjct: 385 LMDEFNQFFERCESIDGFQHLAGVMSKKSLGSEENLSRSVKGEEKDREHKRDVEAAKEKE 444
Query: 477 RYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGS 536
R K+KY KSIQELDLS+C+RCTPSYRLLP DYPIPS R + GA VLNDHWVSVTSGS
Sbjct: 445 RSKDKYMGKSIQELDLSDCERCTPSYRLLPPDYPIPSVRHRQKSGAAVLNDHWVSVTSGS 504
Query: 537 EDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFH 596
EDYSFKHMRRNQYEESLFRCEDDRFELDMLLESV S AK AEELLN I + KI+ E F
Sbjct: 505 EDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVGSAAKSAEELLNIIIDKKISFEGSFR 564
Query: 597 LKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKV 656
++DHF+ALNLRCIERLYGDHGLDV D++RKNPA ALPV+LTRLKQKQ+EWTKCR FN V
Sbjct: 565 IEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAALPVILTRLKQKQDEWTKCREGFNVV 624
Query: 657 WAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQ 716
WA++YAKNHYKSLDHRSFYFKQQDSKNLS K+LV+E+K KE Q EDDV+ I+AG+RQ
Sbjct: 625 WADVYAKNHYKSLDHRSFYFKQQDSKNLSAKALVSEVKDLKEKSQKEDDVVLSISAGYRQ 684
Query: 717 PVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSD 776
P+IPHLEY Y D IHEDL+KLVQ+SCEE+CSTK+Q K +KLW FLE ML V R
Sbjct: 685 PIIPHLEYDYLDRAIHEDLFKLVQFSCEEICSTKEQTGKVLKLWANFLELMLDVAPRAKG 744
Query: 777 VEGAEDAGKARH-----SGKNNSASSMVESDGSPGPDGTVNSRQPISSGNGDENTSTELN 831
+ ED + +H SG+ N +S + ++ SRQ + NGD + S+ ++
Sbjct: 745 SDSVEDVVETQHQRAFTSGEANESSDAI----------SLVSRQLKFATNGDVHASSGVS 794
Query: 832 NLCRTALSNGDTITKENVLDSDRVYRDDLSCSALQLEKEQKNVDISD---KRSGIIIQVA 888
T L N D+ KEN+ D D +D +C+ EK QK+ +I + KRSG
Sbjct: 795 KHGETGLLNRDSSGKENLKDGDLANKDVATCA----EKPQKDQEIGNGAAKRSG-----D 845
Query: 889 VGERVANSDASPAIGAENSHGRTGSEMMSASL----RPCDAAKDDLKHEANVNPVPPSEV 944
V ERVA S +S G EN++G+ GS S S +P +A ++ V +
Sbjct: 846 VDERVATSSSSFPSGVENNNGKVGSRDSSGSRGILSKPSEA----------IDKVDSIQH 895
Query: 945 TQGCDLAKPTLLENGALRDGAKGINYHEKSVGPTKIEKEEGELSPNGDFEEDNFGVYGDA 1004
TQG D+ + +L NG D +K + +++S GP+KIEKEEGELSP GD EDNF VY D
Sbjct: 896 TQGVDIGRIIVLGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGD-SEDNFVVYEDR 954
Query: 1005 AVKTLPKAKHGVESRQYQSKNEKGLQHQVVGGENDADADDEDSGNASVAGDDASGSESAG 1064
+K K +H VE+ ++ +AS AG+DASG+ES G
Sbjct: 955 ELKATAKTEHSVEAEGENDEDADDEDGD----------------DASEAGEDASGTESIG 998
Query: 1065 DEYSREEHEEEEDVERDDVDGKAESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPLAK 1124
DE S++++ EE+ E D++DGKAESEGEA+GM + H + + P SER LLSVKPL+K
Sbjct: 999 DECSQDDNGVEEEGEHDEIDGKAESEGEAEGM-ESHLIEDKGL-FPSSERVLLSVKPLSK 1056
Query: 1125 FVPATSV--EERKDCRVFYGNDDFYVLFRLHQT------------LYERIQWAKMNTTGA 1170
+ A ++ E++KD RVFYGNDDFYVLFRLH+ LYERI AK +G+
Sbjct: 1057 HIAAAALVDEKKKDSRVFYGNDDFYVLFRLHRVSAIDSYDLLSHILYERILSAKTYCSGS 1116
Query: 1171 EMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYR 1230
EMK R +K+ D YARFM AL++LL+GS +N+KFEDECRAIIGNQSYVLFTL+KL+Y+
Sbjct: 1117 EMKLRNTKDTCSPDPYARFMNALFSLLNGSAENSKFEDECRAIIGNQSYVLFTLEKLIYK 1176
Query: 1231 LCKQLQTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQLVKS 1288
L KQLQ V AD+MDNKL+QLYEYE SR+PG+ DSVYYENAR+LLHEENIYR++ S
Sbjct: 1177 LVKQLQAVVADDMDNKLLQLYEYENSRRPGRVFDSVYYENARILLHEENIYRLECSSS 1234
>sp|Q9SRH9|SNL1_ARATH Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana
GN=SNL1 PE=1 SV=2
Length = 1372
Score = 1431 bits (3703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 768/1299 (59%), Positives = 941/1299 (72%), Gaps = 70/1299 (5%)
Query: 1 MKRIRDDVYG-GSQFKRPLTTAPPRGESYGLSPQLPGTGAGGGGGAGGGGGAGAGGGSGV 59
MKRIRDDVY GSQF+RPL ++ RG+ G SP G+G GG V
Sbjct: 1 MKRIRDDVYASGSQFRRPLGSS--RGQLCGQSPV---------HGSGDTEEEEEGGSRRV 49
Query: 60 GGGGGGMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGV 119
SQKLTT+DAL+YL+EVK+MFQDQREKYD FLEVMKDFKAQRTDT GV
Sbjct: 50 -------------SQKLTTNDALSYLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGV 96
Query: 120 IARVKDLFKGHNNLIFGFNTFLPKGYEITL-DEDEAPPKKTVEFEEAITFVNKIKKRFHN 178
IARVK+LFKGHNNLI+GFNTFLPKGYEITL +ED+A PKKTVEFE+AI FVNKIK RF +
Sbjct: 97 IARVKELFKGHNNLIYGFNTFLPKGYEITLIEEDDALPKKTVEFEQAINFVNKIKMRFKH 156
Query: 179 DEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDT--SATSLSHN 236
DEHVYKSFLEILNMYRKE+K+I EVY+EV+ LF+ H DLLE+FTRFLP + S ++ H+
Sbjct: 157 DEHVYKSFLEILNMYRKENKEIKEVYNEVSILFQGHLDLLEQFTRFLPASLPSHSAAQHS 216
Query: 237 IPFVRNSTQRGNERSAGIPPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEKLMIKM 296
R+ Q+ ++R + P L QMQ++K RRR+R D SV+R +++D+K M+K+
Sbjct: 217 ----RSQAQQYSDRGSDPPLLHQMQVEKERRRERAVALRGD--YSVERYDLNDDKTMVKI 270
Query: 297 QKEQRRRAEKENRDRRNRDQDDREIEHDNNRDFNLQRFPDKKKSIKKVEGFGANSSLASY 356
Q+EQR+R +KENR RR RD DDRE DN L FP+K+KS ++ E A S AS+
Sbjct: 271 QREQRKRLDKENRARRGRDLDDREAGQDN-----LHHFPEKRKSSRRAEALEAYSGSASH 325
Query: 357 DDKDALKSIYNQGFIFCDKVKEKLCS-DDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGK 415
+KD LKS+Y Q F+FC+KVK++LCS DDYQ FLKCL+I+SNGII+R DLQNLV+DLLGK
Sbjct: 326 SEKDNLKSMYKQAFVFCEKVKDRLCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGK 385
Query: 416 YMDLMDEFNHFFERCENI-DGF--LAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVT 472
+ DLMDEFN FFERCE+I DGF LAGVMSKK ++ +SR +K+E+K+ EHK E+E
Sbjct: 386 FPDLMDEFNQFFERCESITDGFQRLAGVMSKKLFSSEEQLSRPMKVEEKESEHKPELEAV 445
Query: 473 KEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSV 532
KE ++ K++Y KSIQELDLS+C+ CTPSYRLLP DYPIP ASQRSELGA+VLNDHWVSV
Sbjct: 446 KETEQCKKEYMGKSIQELDLSDCECCTPSYRLLPADYPIPIASQRSELGAEVLNDHWVSV 505
Query: 533 TSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLE 592
TSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSS A+ AE LLN I E KI+
Sbjct: 506 TSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSAARSAESLLNIITEKKISFS 565
Query: 593 TPFHLKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSD 652
F ++DHF+ALNLRCIERLYGDHGLDV+DIL KNPA ALPV+LTRLKQKQ EW KCR D
Sbjct: 566 GSFRIEDHFTALNLRCIERLYGDHGLDVIDILNKNPATALPVILTRLKQKQGEWKKCRDD 625
Query: 653 FNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAA 712
F+KVWA +YAKNHYKSLDHRSFYFKQQDSKNLS KSL+AEIK+ KE Q +DDVL I+A
Sbjct: 626 FDKVWANVYAKNHYKSLDHRSFYFKQQDSKNLSAKSLLAEIKELKEKSQNDDDVLLSISA 685
Query: 713 GHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPS 772
G+RQP+ P+LEY Y + IHED++K+VQ+SCEE+CSTK+QL+K ++LW FLE +L VP
Sbjct: 686 GYRQPINPNLEYEYLNRAIHEDMFKVVQFSCEELCSTKEQLSKVLRLWENFLEAVLGVPP 745
Query: 773 RPSDVEGAEDAG-KARHSGKNNSASSMVESDGSPGPD-GTVNSRQPISSGNGDENTSTEL 830
R + ED + N+S S E+ S G D + SR+ S+ NGDEN+S+
Sbjct: 746 RAKGTDLVEDVVINPKTLDVNHSTSPNGEAAVSSGGDTARLASRKLKSAANGDENSSSGT 805
Query: 831 NNLCRTALSNGDTITKENVLDSDRVYRDDLSCSALQLEKEQKNVDISDKRSGIIIQVAVG 890
L N D+ KEN+ D + RD ++CSA++ +KEQ+ + ++KR G I + +
Sbjct: 806 FKHG-IGLLNKDSTGKENLEDVEIANRDGVACSAVKPQKEQETGNEAEKRFGKPIPMDIS 864
Query: 891 ERVANSDASPAIGAENSHGRTGSEMMSAS----LRPCDAAKDDLKHEANVNPVPPSEVTQ 946
ER A S S GAEN+H G E++ + +P D D+ H +V+ + TQ
Sbjct: 865 ERAAISSISIPSGAENNHCVVGKEVLPGAHEIQAKPSDTLT-DIHH--DVDSIETVHSTQ 921
Query: 947 GCDLAKPTLLENGALRDGAKGINYHEKSVGPTKIEKEEGELSPNGDFEEDNFGVYGDAAV 1006
G D+ +L NG D +KG + GP++ EKEEGELSPNGDF EDNFGVY D
Sbjct: 922 GGDVGNSIVLANGLRSDSSKGTRNSDDPEGPSRNEKEEGELSPNGDF-EDNFGVYKD--- 977
Query: 1007 KTLPKAKHGVESRQYQSKNEKGLQHQVVGGENDADADDEDSGNASVAGDDASGSESAGDE 1066
HGV+S + + EN+ DADD DS NAS +ASG+ES GD
Sbjct: 978 -------HGVKSTSKPENSAEAEVEADAEVENEDDADDVDSENAS----EASGTESGGDV 1026
Query: 1067 YSREEHEEEEDVERDDVDGKAESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPLAKFV 1126
S++E EEE+ E D++DGKAESEGEA+GM D H + G+ LP SER LLSV+PL+K V
Sbjct: 1027 CSQDEDREEENGEHDEIDGKAESEGEAEGM-DPHLLEGESELLPQSERVLLSVRPLSKHV 1085
Query: 1127 PATSVEER-KDCRVFYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDL 1185
A +ER KD +VFYGNDDFYVLFRLHQ LYERI +AK N +G E+K + K+ + D
Sbjct: 1086 AAVLCDERTKDLQVFYGNDDFYVLFRLHQILYERILYAKRNCSGGELKSKNLKDTNAGDP 1145
Query: 1186 YARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDN 1245
YARFM LY LLDGS +N KFEDECRAIIGNQSYVLFTLDKL+YRL KQLQ + ADEMDN
Sbjct: 1146 YARFMRVLYGLLDGSAENTKFEDECRAIIGNQSYVLFTLDKLIYRLVKQLQAIVADEMDN 1205
Query: 1246 KLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQ 1284
KL+QLYEYE+SRKPG+ IDSVYYEN RVL+HEENIYR++
Sbjct: 1206 KLLQLYEYEKSRKPGRVIDSVYYENVRVLVHEENIYRLE 1244
>sp|O04539|SNL4_ARATH Paired amphipathic helix protein Sin3-like 4 OS=Arabidopsis thaliana
GN=SNL4 PE=3 SV=3
Length = 1326
Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/1311 (49%), Positives = 842/1311 (64%), Gaps = 129/1311 (9%)
Query: 68 AGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLF 127
G ++QKLTT+DAL YLK VKD FQD+R+KYD FLEVMKDFKAQR DT GVI RVK+LF
Sbjct: 2 VGGSSAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKELF 61
Query: 128 KGHNNLIFGFNTFLPKGYEITL---DEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYK 184
KG+ LI GFNTFLPKG+EITL D+ A PKK VEFEEAI+FVNKIK RF D+ VYK
Sbjct: 62 KGNRELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVNKIKTRFQGDDRVYK 121
Query: 185 SFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNST 244
SFL+ILNMYRKE+K I EVY EVA LF DH DLL EFT FLPDTSAT+ + N +
Sbjct: 122 SFLDILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSATAST-------NDS 174
Query: 245 QRGNERSAGI---PPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEKLMIKMQKEQR 301
+ R GI P +RQ+ +DK +DRI TSH +R L + ++D E+ ++K KE+
Sbjct: 175 VKVPVRDRGIKSLPTMRQIDLDK---KDRIITSHPNRALKTENMDVDHERSLLKDSKEEV 231
Query: 302 RRAEKENRDRRNRDQDD-REIEHDNNRDFNLQRFPDKKKSIKK-----------VEG--- 346
RR +K+N +RD+ D R ++HD++++ F KKK I+K EG
Sbjct: 232 RRIDKKNDFMDDRDRKDYRGLDHDSHKE---HFFNSKKKLIRKDDDSAEMSDQAREGDKF 288
Query: 347 FGANSSLASYDDKDALKSIYNQGFIFCDKVKEKLCSDDYQAFLKCLHIYSNGIIKRNDLQ 406
GA S ++YD+K ++Q F D+VK KL + D Q FL+CL++YS II + +LQ
Sbjct: 289 SGAIPSSSTYDEKG-----HSQELAFVDRVKAKLDTADNQEFLRCLNLYSKEIISQPELQ 343
Query: 407 NLVTDLLGKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHK 466
+LV+DL+G Y DLMD F F +C+ DG L+G++SKKSL ++G + K DKD + +
Sbjct: 344 SLVSDLIGVYPDLMDAFKVFLAQCDKNDGLLSGIVSKKSLWSEGKCPQPTKSLDKDTDRE 403
Query: 467 RE-MEVTKEKDRYKEKY--------YAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQR 517
RE +E +E+DR KE+ +AK I ELDLSNC++CTPSYR LP +YPIP ASQ+
Sbjct: 404 REKIERYRERDREKERLEKVAASQKWAKPISELDLSNCEQCTPSYRRLPKNYPIPIASQK 463
Query: 518 SELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRA 577
E+G+QVLNDHWVSVTSGSEDYSFKHMR+NQYEESLF+CEDDRFELDMLLESV S R
Sbjct: 464 MEIGSQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFKCEDDRFELDMLLESVISATNRV 523
Query: 578 EELLNSINENKITLETPFHLKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLT 637
EELL IN N++ +TP ++DH +ALNLRCIERLY DHGLDV+D+L+KN +ALPV+LT
Sbjct: 524 EELLAKINSNELKTDTPICIEDHLTALNLRCIERLYSDHGLDVLDLLKKNAYLALPVILT 583
Query: 638 RLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFK 697
RLKQKQEEW +CR++FNKVWA+IY KN+++SLDHRSFYFKQQDSKNLSTK+L+AEIK+
Sbjct: 584 RLKQKQEEWARCRTEFNKVWADIYTKNYHRSLDHRSFYFKQQDSKNLSTKALLAEIKEIS 643
Query: 698 ENKQTEDDVLFVIAAGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAM 757
E K+ EDD L +AAG+R+ + ++ + Y D ++HEDLY+L++YSC EMCST +QL+K M
Sbjct: 644 EKKRGEDDALLALAAGNRRTISSNMSFDYPDPDLHEDLYQLIKYSCGEMCST-EQLDKVM 702
Query: 758 KLWTTFLEPMLSVPSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPI 817
K+WT FLEP+ VPSRP E EDA K+ + + + ++ +G+ NS +
Sbjct: 703 KVWTEFLEPIFGVPSRPQGAEDREDAVKSTNHDREDQEDAVSPQNGA----SIANSMR-- 756
Query: 818 SSGNGDENTSTELNNLCRTALSNGDTITKENVLDSDRVYRDDLSCSALQLEKEQKNVDIS 877
S+G N S N R A +T D+ LSC Q +K KN+
Sbjct: 757 SNGPRKVNES----NQVRQASELDKDVTSSKTSDA------LLSCDNTQNDKMPKNLTTP 806
Query: 878 DKRSGIIIQVAVGERVANSDASPAIGAENSHGRTGSEMMSASLRPCDAAKDDLKHEANVN 937
D+R+ V++ ER NS+A P G S + A L +N N
Sbjct: 807 DERAETKQAVSI-ERAHNSNALPLDGLLPQRNGKISSLSVAGL-------------SNSN 852
Query: 938 PVPPSEVTQGCDLAKPTLLENGALRDGAKGI----NYHEKSVGPTKIEKEEGELSPNGDF 993
P P +T G + KP + + G + E G K+E+EEGELSP GDF
Sbjct: 853 PKPA--LTSGTEELKPNYVNGPRVEIGDNPVIPNGTVAEWFAGEAKVEREEGELSPTGDF 910
Query: 994 EEDNFGVYGDAAVKTLPKAKHGVESRQYQSKNEKGLQHQVVGGENDADADDEDSGNASVA 1053
EEDN+ V+G+ ++ L K+K ENDA ADD + +S
Sbjct: 911 EEDNYAVHGENDMEALSKSK-----------------------ENDATADDASAPRSS-- 945
Query: 1054 GDDASGSESAGDEYSREEHEEEEDVER-DDVD-GKAESEGEA-DGMADQH-FVGGDCMSL 1109
D SG+ S + S + + ED R DD+D K ESEGEA +GM+D H GD L
Sbjct: 946 --DGSGNTSHNGDVSGTDSGDGEDCYREDDIDHNKVESEGEAEEGMSDGHDDTEGDMPVL 1003
Query: 1110 PMSERFLLSVKPLAKFVPATSVEE-----RKDCRVFYGNDDFYVLFRLHQTLYERIQWAK 1164
+S + LL VKPLAK+VP ++ RK+ +VFYGND FYVLFRLHQ LY+RI AK
Sbjct: 1004 SISVKNLLHVKPLAKYVPPALYDKDNDDSRKNSQVFYGNDSFYVLFRLHQILYDRILSAK 1063
Query: 1165 MNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTL 1224
+N++ + K +TS + +D YAR M ALYNLLDG+ DN+KFED+CRAIIG QSYVLFTL
Sbjct: 1064 INSSSPDRKWKTSNPTNPADSYARIMDALYNLLDGTSDNSKFEDDCRAIIGTQSYVLFTL 1123
Query: 1225 DKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQ 1284
DKL+Y+L K LQ VAADEMDNKL QLY YE+SRKP K +D+VYYENA VLL +E+IYRI+
Sbjct: 1124 DKLIYKLIKHLQAVAADEMDNKLQQLYAYEKSRKPEKFLDAVYYENALVLLPDEDIYRIE 1183
Query: 1285 LVKSFELFFFLLSSPLICTLTYQHTRCLPIVVNFTVYVTICSHCFFFFFQY 1335
+S S I L Y H + P V + ++ T ++ F Y
Sbjct: 1184 CEQSTP------SKLSIQLLDYGHDK--PDVTSISMDPTFAAYLHNVFLSY 1226
>sp|O48686|SNL3_ARATH Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana
GN=SNL3 PE=1 SV=3
Length = 1330
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/1252 (51%), Positives = 816/1252 (65%), Gaps = 91/1252 (7%)
Query: 68 AGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLF 127
G G++QKLTT+DAL YLK VKD FQDQR KYD FLEVMK+FK+QR DTAGVI RVK+LF
Sbjct: 2 VGGGSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKELF 61
Query: 128 KGHNNLIFGFNTFLPKGYEITLD-EDEAPP-KKTVEFEEAITFVNKIKKRFHNDEHVYKS 185
KGH LI GFNTFLPKG+EITL ED PP KK VEFEEAI+FVNKIK RF D+ VYKS
Sbjct: 62 KGHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVYKS 121
Query: 186 FLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQ 245
FL+ILNMYR++ K I EVY EVA LF DH+DLL EFT FLPDTSAT+ +IP V+ S +
Sbjct: 122 FLDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATA---SIPSVKTSVR 178
Query: 246 RGNERSAGIPPLRQMQMDKHRRRDRIATSHADRDLSVDRPEMDDEKLMIKMQKEQRRRAE 305
ER + ++DRI T H D D + + D E+ + K KE R
Sbjct: 179 ---ERGVSLAD----------KKDRIITPHPDHDYGTEHIDQDRERPIKKENKEHMRGTN 225
Query: 306 KENRDRRNRD-QDDREIEHDNNRDFNLQRFPDKKKSIKKVEGF-GANSSLASYDDKDALK 363
KEN R RD + + E N+ L D I GA S ++YD+K A+K
Sbjct: 226 KENEHRDARDFEPHSKKEQFLNKKQKLHIRGDDPAEISNQSKLSGAVPSSSTYDEKGAMK 285
Query: 364 SIYNQGFIFCDKVKEKLCSDDYQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEF 423
S Y+Q D+VKEKL + +YQ FL+CL+++S II R +LQ+LV +L+G Y DLMD F
Sbjct: 286 S-YSQDLAIVDRVKEKLNASEYQEFLRCLNLFSKEIISRPELQSLVGNLIGVYPDLMDSF 344
Query: 424 NHFFERCENIDGFLAGVMSKKS----LCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYK 479
F +CE +G L+G+++K L +G + D+D+EHKR+ + +++D K
Sbjct: 345 IEFLVQCEKNEGLLSGILTKSKSTYLLQGEGKYPQPSLDNDRDQEHKRD-DGLRDRDHEK 403
Query: 480 EKY--------YAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVS 531
E+ +AK I ELDLSNC++CTPSYRLLP +YPI ASQ++E+G VLNDHWVS
Sbjct: 404 ERLEKAAANLKWAKPISELDLSNCEQCTPSYRLLPKNYPISIASQKTEIGKLVLNDHWVS 463
Query: 532 VTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITL 591
VTSGSEDYSF HMR+NQYEESLF+CEDDRFELDMLLESV+ST K EELL IN N++
Sbjct: 464 VTSGSEDYSFSHMRKNQYEESLFKCEDDRFELDMLLESVNSTTKHVEELLTKINSNELKT 523
Query: 592 ETPFHLKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRS 651
+P ++DH +ALNLRCIERLYGDHGLDVMD+L+KN ++ALPV+LTRLKQKQEEW +CRS
Sbjct: 524 NSPIRVEDHLTALNLRCIERLYGDHGLDVMDVLKKNVSLALPVILTRLKQKQEEWARCRS 583
Query: 652 DFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIA 711
DF+KVWAEIYAKN+YKSLDHRSFYFKQQDSK LS K+L+AEIK+ E K+ EDD L A
Sbjct: 584 DFDKVWAEIYAKNYYKSLDHRSFYFKQQDSKKLSMKALLAEIKEITEKKR-EDDSLLAFA 642
Query: 712 AGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVP 771
AG+R + P LE+ Y D ++HEDLY+L++YSC EMCST +QL+K MK+WTTF+E + VP
Sbjct: 643 AGNRLSISPDLEFDYPDHDLHEDLYQLIKYSCAEMCST-EQLDKVMKIWTTFVEQIFGVP 701
Query: 772 SRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPGPDGTV-NSRQPISSGNGDENTSTEL 830
SRP E ED K+ + + +SS ES+GSP +V +SR+ SS +E++
Sbjct: 702 SRPQGAEDQEDVVKSMNQNVKSGSSSAGESEGSPHNYASVADSRRSKSSRKANEHS---- 757
Query: 831 NNLCRTALSNGDTITKENVLDSDRVYRDDLSCSALQLEKEQKNVDISDKRSGIIIQVAVG 890
L +T+ S D D C Q EK KNV SD++ V++
Sbjct: 758 -QLGQTSNSERDGAAGRT---------SDALCETAQHEKMLKNVVTSDEKPESKQAVSI- 806
Query: 891 ERVANSDASPAIG-AENSHGRTGSEMMSA----SLRPCDAAKDDLKHEANVNPVPPSEVT 945
ER +S A G + S+G + M+ +L+P +L+ + N P EV
Sbjct: 807 ERAHDSTALAVDGLLDQSNGGSSIVHMTGHCNNNLKPVTCGT-ELELKMNDGNGPKLEV- 864
Query: 946 QGCDLAKPTLLENGALRDGAKGINYHEKSVGPTKIEKEEGELSPNGDFEEDNFGVYGDAA 1005
LL NG A I ++ G +K+E+EEGELSPNGDFEEDNF VY
Sbjct: 865 -----GNKKLLTNGI----AVEITSDQEMAGTSKVEREEGELSPNGDFEEDNFAVYAKTD 915
Query: 1006 VKTLPKAKHGVESRQYQSKNEKGLQHQV-VGGENDADADD------EDSGNASVAGDDAS 1058
+T KA + ++ +G + ENDA+ D+ EDS N G D S
Sbjct: 916 FETFSKANDSTGNNISGDRSREGEPSCLETRAENDAEGDENAARSSEDSRNEYENG-DVS 974
Query: 1059 GSESAGDEYSREEHEEEEDVERDDVDGKAESEGEADGMADQHFVGGDCMSLPMSERFLLS 1118
G+ES G E + E+D+ D + K ESEGEA+ MAD H + +LP+S RFLL
Sbjct: 975 GTESGGGE------DPEDDL---DNNNKGESEGEAECMADAHDAEENGSALPVSARFLLH 1025
Query: 1119 VKPLAKFVP-ATSVEER-----KDCRVFYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEM 1172
VKPL K+VP A ++ ++ K+ +VFYGND FYVLFRLH+ LYERI AK+N++ E
Sbjct: 1026 VKPLVKYVPSAIALHDKDKDSLKNSQVFYGNDSFYVLFRLHRILYERILSAKVNSSSPEG 1085
Query: 1173 KRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLC 1232
K RTS + +D YARFMTALYNLLDG+ DNAKFED+CRAIIG QSY+LFTLDKL+++
Sbjct: 1086 KWRTSNTKNPTDSYARFMTALYNLLDGTSDNAKFEDDCRAIIGTQSYILFTLDKLIHKFI 1145
Query: 1233 KQLQTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQ 1284
K LQ V ADEMDNKL+QLY YE+SR+P D+VYY+N RVLL +ENIYRI+
Sbjct: 1146 KHLQVVVADEMDNKLLQLYFYEKSRRPETIFDAVYYDNTRVLLPDENIYRIE 1197
>sp|Q9XIE1|SNL5_ARATH Paired amphipathic helix protein Sin3-like 5 OS=Arabidopsis
thaliana GN=SNL5 PE=2 SV=3
Length = 1162
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 274/672 (40%), Positives = 371/672 (55%), Gaps = 110/672 (16%)
Query: 348 GANSSLASYDDKDALKSIYNQGFIFCDKVKEKLCSDD--YQAFLKCLHIYSNGIIKRNDL 405
G +L D+K + F +++K + DD Y+ FL L++Y N++
Sbjct: 109 GYKITLQPEDEKPKKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEV 168
Query: 406 QNLVT-------DLLGKYMDLM-------------------------------------- 420
VT DLLG+++ +
Sbjct: 169 YQEVTLLFQDHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKK 228
Query: 421 ------DEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIED--------KDREHK 466
DE+ ++ E+ D L S +SL N G K+ED + H+
Sbjct: 229 IKRSRHDEYTELSDQREDGDENLVA-YSAESLANQGQWPGYPKVEDTEGIQIYESNGGHE 287
Query: 467 REMEVTKEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLN 526
R+ ++ +K+ + AK+I ELDL++C +CTPSYR LPDDYPI S R+ LG +VLN
Sbjct: 288 RDPDIGSQKNLLSTNHMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEKVLN 347
Query: 527 DHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINE 586
DHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESVS+ KR E LL IN
Sbjct: 348 DHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVSAAIKRVESLLEKINN 407
Query: 587 NKITLETPFHLKDHFSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEW 646
N I++ETP +++H S LNLRCIERLYGD+GLDVMD L+KN IALPV+LTRLKQKQEEW
Sbjct: 408 NTISIETPICIREHLSELNLRCIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQEEW 467
Query: 647 TKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDV 706
+CR+DF KVWAE+YAKNH+KSLDHRSFYFKQQDSKNLSTK LVAEIK E K E D+
Sbjct: 468 ARCRADFRKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKE-DL 526
Query: 707 LFVIAAGHRQPVIPHLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEP 766
L IA G + P +E+ Y+D+ +H DLYKL++Y CEE+C+T +Q +K MKLW TFLEP
Sbjct: 527 LRAIAVGTKPSFTPDVEFIYTDTKVHTDLYKLIKYYCEEICAT-EQSDKVMKLWVTFLEP 585
Query: 767 MLSVPSRPSDVEGAEDAGKARHSGKNNSASSMVESDGSPG----------PDGTVNSRQP 816
M VPSR +E +D K + +++ AS V+ + G P N P
Sbjct: 586 MFGVPSRSETIETMKDVAKIEDNQEHHDASEAVKENTCDGSMASNLKPLTPPKMPNKENP 645
Query: 817 ISSGN----------GDENTSTELNNLCRTALSNGDT-----------ITKENVLDSDRV 855
+ G+ G+ +L+++ A++N D+ + E V + RV
Sbjct: 646 MIQGSSFAQDLPVNTGESIQQDKLHDVA--AITNEDSQPSKLVSTRNDLIMEGVENRSRV 703
Query: 856 YRDDLSCSALQLEK-----------EQKNVDISDKRSGIIIQVAVGERVANSDASPAIGA 904
D+S ++E+ EQ+N ++ + +Q ++N+D P GA
Sbjct: 704 --SDVSMGGHKVEREEGELSPTESCEQENFEVYKENGLEPVQKLPDNEISNTDREPKEGA 761
Query: 905 ENSHGRTGSEMM 916
+ T S +
Sbjct: 762 CGTEAVTRSNAL 773
Score = 256 bits (654), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 152/322 (47%), Positives = 193/322 (59%), Gaps = 28/322 (8%)
Query: 974 SVGPTKIEKEEGELSPNGDFEEDNFGVYGDAAVKTLPKAKHGVESRQYQSKNEKGLQHQV 1033
S+G K+E+EEGELSP E++NF VY + ++ + K S + E +
Sbjct: 707 SMGGHKVEREEGELSPTESCEQENFEVYKENGLEPVQKLPDNEISNTDREPKEGACGTEA 766
Query: 1034 VGGENDADADDEDSGNASVA-GDD------ASGSESAGDEYSREEHEEEEDVERDDVDGK 1086
V N DD++ ++ GD+ S S+ G S EEH+
Sbjct: 767 VTRSNALPEDDDNKITQKLSEGDENASKFIVSASKFGGQVSSDEEHK------------G 814
Query: 1087 AESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPLAKFVP----ATSVEERKDCRVFYG 1142
AESE EA GM + + G D SER+L VKPLAK VP A+ + R D RVFYG
Sbjct: 815 AESENEAGGMVNSN-EGEDGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRVFYG 873
Query: 1143 NDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSID 1202
ND YVLFRLHQ LYERIQ AK+++ ++ + +++ +D Y RFM ALYNLLDGS D
Sbjct: 874 NDSLYVLFRLHQMLYERIQSAKIHSE----RKWKAPDSTSTDSYTRFMEALYNLLDGSSD 929
Query: 1203 NAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKPGKQ 1262
N KFEDECRAIIG QSYVLFTLDKL+ + K L VAADE D KL+QLY YE RKPG+
Sbjct: 930 NTKFEDECRAIIGAQSYVLFTLDKLVQKFVKHLHAVAADETDTKLLQLYAYENYRKPGRF 989
Query: 1263 IDSVYYENARVLLHEENIYRIQ 1284
D VY+ENAR LLH++NIYRI+
Sbjct: 990 FDIVYHENARALLHDQNIYRIE 1011
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/271 (50%), Positives = 166/271 (61%), Gaps = 39/271 (14%)
Query: 1 MKRIRDDVYGGSQFKRPLTTAPPRGESYGLSPQLPGTGAGGGGGAGGGGGAGAGGGSGVG 60
MKR+R++VY Q + P T RGE+
Sbjct: 1 MKRVREEVYVEPQMRGP--TVSSRGET--------------------------------- 25
Query: 61 GGGGGMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVI 120
G +G GT+ LTT DALTYLK VKDMFQD +EKY+ FL VMKDFKAQR DT GVI
Sbjct: 26 NGRPSTISGGGTTGGLTTVDALTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVI 85
Query: 121 ARVKDLFKGHNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDE 180
ARVKDLFKG+++L+ GFNTFLPKGY+ITL ++ PKK V+F+ AI FVN+IK RF D+
Sbjct: 86 ARVKDLFKGYDDLLLGFNTFLPKGYKITLQPEDEKPKKPVDFQVAIEFVNRIKARFGGDD 145
Query: 181 HVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIP-F 239
YK FL+ILNMYRKE K INEVY EV LF+DH DLL EF FLPD S+S N P F
Sbjct: 146 RAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEFVHFLPDFRG-SVSVNDPLF 204
Query: 240 VRNSTQRGNERSAGIPPLRQMQMDKHRRRDR 270
RN+ R +R++ P + +K +R R
Sbjct: 205 QRNTIPR--DRNSTFPGMHPKHFEKKIKRSR 233
>sp|Q9XIK6|SNL6_ARATH Paired amphipathic helix protein Sin3-like 6 OS=Arabidopsis
thaliana GN=SNL6 PE=3 SV=2
Length = 1173
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/338 (59%), Positives = 241/338 (71%), Gaps = 7/338 (2%)
Query: 481 KYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYS 540
KY I ELDLS C +CTPSYRLLP DY + S R+ LG + LNDH VSVTSGSEDYS
Sbjct: 336 KYVGTPINELDLSECTQCTPSYRLLPKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYS 395
Query: 541 FKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDH 600
F HMR+NQYEESLFRCEDDR+E+DMLL SVSS K+ E LL +N N I++++ ++ H
Sbjct: 396 FSHMRKNQYEESLFRCEDDRYEMDMLLGSVSSAIKQVEILLEKMNNNTISVDSTICIEKH 455
Query: 601 FSALNLRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEI 660
SA+NLRCIERLYGD+GLDVMD+L+KN ALPV+LTRLKQKQEEW +C SDF KVWAE+
Sbjct: 456 LSAMNLRCIERLYGDNGLDVMDLLKKNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEV 515
Query: 661 YAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVIP 720
YAKNH+KSLDHRSFYFKQQDSKNLSTK LVAE+K E K E D+L IA P
Sbjct: 516 YAKNHHKSLDHRSFYFKQQDSKNLSTKCLVAEVKDISEKKHQE-DLLQAIAVRVMPLFTP 574
Query: 721 HLEYGYSDSNIHEDLYKLVQYSCEEMCSTKDQLNKAMKLWTTFLEPMLSVPSRPSDVEGA 780
LE+ Y D+ IHEDLY L++Y CEE+C+T +Q +K MKLW TFLEP+ + SR D
Sbjct: 575 DLEFNYCDTQIHEDLYLLIKYYCEEICAT-EQSDKVMKLWITFLEPIFGILSRSQDNLAL 633
Query: 781 EDAGKARHSGKNNSASSMVESDGSPGPDGTVNSRQPIS 818
ED K +++ + A V+ S N + PIS
Sbjct: 634 EDVSKLKNNRELQDACLAVKETASGS-----NRKHPIS 666
Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 211/382 (55%), Gaps = 31/382 (8%)
Query: 908 HGRTGSEMMSASLRPCDAAKDDLKHEANVNPVPPSEVTQGCDLAKPTLLENGALRDGAKG 967
G + E +SA+++ A D L+ +A + +EV Q P + + D
Sbjct: 678 QGSSSREDVSANIKVKTAQPDKLQDDAAMT----NEVIQSSKFVSPK--NDQIMEDEG-- 729
Query: 968 INYHEKSVGPTKIEKEEGELSPNGDFEEDNFGVYGDAAVKTLPKAKHGVESRQYQSKNEK 1027
N+ + K E EEGELSP E+ NF V G A K L K V S + + +K
Sbjct: 730 -NHMVNAASVEKHELEEGELSPTASREQSNFEVNGQNAFKPLQKVTDNVRSNKDKQSCDK 788
Query: 1028 GLQHQVVGGENDADADDEDSGNA-SVAGDDASGSESAGDEYSREEHEEEEDVERDDVDGK 1086
G +N A+D+ N ++ ++ + SE HEE V + +G+
Sbjct: 789 K------GAKNKTRAEDDKQENCHKLSENNKTASEMLVSGTKVSCHEENNRVM--NCNGR 840
Query: 1087 AESEGEADGMADQHFVGGDCMSLPMSERFLLSVKPLAKFVP----ATSVEERKDCRVFYG 1142
GE MA+ + G+ S SERFL +VKP+AK + A+ + D +VFYG
Sbjct: 841 GSVAGE---MANGN--QGEDGSFAFSERFLQTVKPVAKHLSWPLQASETCSQNDSQVFYG 895
Query: 1143 NDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDGSID 1202
ND +YVLFRLHQ LYERIQ AK ++ K+ + + + D Y RFM ALYNLLDGSID
Sbjct: 896 NDSYYVLFRLHQMLYERIQTAKKHSE----KKWKAADNTTPDSYPRFMDALYNLLDGSID 951
Query: 1203 NAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKPGKQ 1262
N KFEDECRAI G QSYVLFTLDKL+ + K L +VA+DE D KL+QL+ YE RKPGK
Sbjct: 952 NTKFEDECRAIFGAQSYVLFTLDKLVQKFVKHLHSVASDETDTKLLQLHAYENYRKPGKF 1011
Query: 1263 IDSVYYENARVLLHEENIYRIQ 1284
D VY+ENA LLHE NIYRI+
Sbjct: 1012 FDLVYHENACALLHEANIYRIR 1033
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 127/175 (72%), Gaps = 3/175 (1%)
Query: 67 TAGMGTSQKLT-TSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKD 125
+ G + KL T DALTYLK VKD+F D +EKY+ FLE+MK+FKAQ DT GVI R+K
Sbjct: 70 VSSRGETNKLPRTIDALTYLKAVKDIFHDNKEKYESFLELMKEFKAQTIDTNGVIERIKV 129
Query: 126 LFKGHNNLIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKS 185
LFKG+ +L+ GFNTFLPKGY+ITL +E PK V+F++AI FV KIK RF +DEH YK
Sbjct: 130 LFKGYRDLLLGFNTFLPKGYKITLLPEEEKPKIRVDFKDAIGFVTKIKTRFGDDEHAYKR 189
Query: 186 FLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDT--SATSLSHNIP 238
FL+ILN+YRKE K I+EVY EV LF+ H DLL EF FLP+ SA S + +P
Sbjct: 190 FLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEFVNFLPNCPESAPSTKNAVP 244
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 80 DALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNT 139
DA+ ++ ++K F D Y FL+++ ++ ++ + V V LFKGH +L+ F
Sbjct: 168 DAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEFVN 227
Query: 140 FLPKGYEITLDEDEAPPK 157
FLP E A P+
Sbjct: 228 FLPNCPESAPSTKNAVPR 245
>sp|Q96ST3|SIN3A_HUMAN Paired amphipathic helix protein Sin3a OS=Homo sapiens GN=SIN3A
PE=1 SV=2
Length = 1273
Score = 216 bits (551), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 202/377 (53%), Gaps = 55/377 (14%)
Query: 371 IFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+F DKV++ L S + Y+ FL+CL I++ +I R +L LV+ LGK+ +L + F +F
Sbjct: 465 LFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL-- 522
Query: 430 CENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAKSIQE 489
G+ SV +E T K+R E E
Sbjct: 523 -----GY----------------KESVHLE------------TYPKERATEGI----AME 545
Query: 490 LDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQY 549
+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED +F ++ QY
Sbjct: 546 IDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQY 605
Query: 550 EESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFS----ALN 605
EE ++RCED+RFELD++LE+ +T + E + ++ + F L + ++
Sbjct: 606 EEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIH 665
Query: 606 LRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNH 665
+ ++R+Y D D++D LRKNP+IA+P++L RLK K+EEW + + FNKVW E K +
Sbjct: 666 RKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYY 725
Query: 666 YKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIAAGHRQPVIPHL 722
KSLDH+ FKQ D+K L +KSL+ EI+ + +Q TE++ AG PV PHL
Sbjct: 726 LKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEEN------AG--VPVGPHL 777
Query: 723 EYGYSDSNIHEDLYKLV 739
Y D I ED L+
Sbjct: 778 SLAYEDKQILEDAAALI 794
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 1 MKRIRDD----VYGGSQFKRP------------LTTAPP------------RGESYGLSP 32
MKR DD VY Q + P L APP G Y ++P
Sbjct: 1 MKRRLDDQESPVYAAQQRRIPGSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP 60
Query: 33 QLPGTGAGGGGGAGGGGGAGAGGG----SGVGGGGGGMTA-------------GMGTSQK 75
+ G+ G A + V GG + G Q+
Sbjct: 61 SYQVSAMPQSSGSHGPAIAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQR 120
Query: 76 LTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIF 135
L DAL+YL +VK F Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +LI
Sbjct: 121 LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM 180
Query: 136 GFNTFLPKGYEITLDEDE 153
GFNTFLP GY+I + ++
Sbjct: 181 GFNTFLPPGYKIEVQTND 198
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 37/187 (19%)
Query: 1139 VFYGNDDFYVLFRLHQTLYER---------------------------IQWAKMNTTGAE 1171
+FY N+++Y+ RLHQ L R I+ K ++ +
Sbjct: 885 LFYVNNNWYIFMRLHQILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQ 944
Query: 1172 MKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRL 1231
++ + + D Y F+ + +LLDG+ID++++ED R + +Y+ FT+DKL+ +
Sbjct: 945 LRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSI 1004
Query: 1232 CKQLQTVAADEMDNKLIQLYEYEESR-KPGKQ---------IDSVYYENARVLLHEENIY 1281
+QLQ + +DE+ ++ LY E + G Q ++S Y A L+ +EN +
Sbjct: 1005 VRQLQHIVSDEICVQVTDLYLAENNNGATGGQLNTQNSRSLLESTYQRKAEQLMSDENCF 1064
Query: 1282 RIQLVKS 1288
++ ++S
Sbjct: 1065 KLMFIQS 1071
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 16/103 (15%)
Query: 147 ITLDEDEAPP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDI--- 200
+T+ AP + VEF AI +VNKIK RF +YK+FLEIL+ Y+KE ++
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345
Query: 201 ----------NEVYSEVASLFEDHADLLEEFTRFLPDTSATSL 233
EVY++VA LF++ DLL EF +FLPD +++ L
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVL 388
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 154 APPKKTVE---------FEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVY 204
APP V+ E+A+++++++K +F + VY FL+I+ ++ + D V
Sbjct: 106 APPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVI 165
Query: 205 SEVASLFEDHADLLEEFTRFLP 226
S V+ LF+ H DL+ F FLP
Sbjct: 166 SRVSQLFKGHPDLIMGFNTFLP 187
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 65 GMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDT--AG---- 118
G + +Q + + A+ Y+ ++K+ FQ Q + Y FLE++ ++ ++ + AG
Sbjct: 291 GTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYT 350
Query: 119 -------VIARVKDLFKGHNNLIFGFNTFLP 142
V A+V LFK +L+ F FLP
Sbjct: 351 PALTEQEVYAQVARLFKNQEDLLSEFGQFLP 381
>sp|Q60520|SIN3A_MOUSE Paired amphipathic helix protein Sin3a OS=Mus musculus GN=Sin3a
PE=1 SV=3
Length = 1274
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 200/377 (53%), Gaps = 55/377 (14%)
Query: 371 IFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFER 429
+F DKV++ L S + Y+ FL+CL I++ +I R +L LV+ LGK+ +L + F +F
Sbjct: 466 LFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL-- 523
Query: 430 CENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAKSIQE 489
G+ SV +E +E E E
Sbjct: 524 -----GY----------------KESVHLESFPKERATE----------------GIAME 546
Query: 490 LDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQY 549
+D ++C+R SYR LP Y P + R+ L +VLND WVS S SED +F ++ QY
Sbjct: 547 IDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQY 606
Query: 550 EESLFRCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFS----ALN 605
EE ++RCED+RFELD++LE+ +T + E + ++ + F L + ++
Sbjct: 607 EEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIH 666
Query: 606 LRCIERLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNH 665
+ ++R+Y D D++D LRKNP+IA+P++L RLK K+EEW + + FNKVW E K +
Sbjct: 667 RKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYY 726
Query: 666 YKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQ---TEDDVLFVIAAGHRQPVIPHL 722
KSLDH+ FKQ D+K L +KSL+ EI+ + +Q TE++ AG PV PHL
Sbjct: 727 LKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEEN------AG--VPVGPHL 778
Query: 723 EYGYSDSNIHEDLYKLV 739
Y D I ED L+
Sbjct: 779 SLAYEDKQILEDAAALI 795
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 2 KRIRDDVYGGSQFKRPLTTAPP------------RGESYGLSPQLPGTGAGGGGGAGGGG 49
+RI S R L APP G Y ++P + G+ G
Sbjct: 18 RRIPGSTEAFSHQHRVLAPAPPVYEAVSETMQSATGIQYSVAPNYQVSAVPQSSGSHGPA 77
Query: 50 GAGAGGG----SGVGGGGGGMTA-------------GMGTSQKLTTSDALTYLKEVKDMF 92
A + V GG + G Q+L DAL+YL +VK F
Sbjct: 78 IAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQRLKVEDALSYLDQVKLQF 137
Query: 93 QDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTFLPKGYEITLDED 152
Q + Y+ FL++MK+FK+Q DT GVI+RV LFKGH +LI GFNTFLP GY+I + +
Sbjct: 138 GSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTN 197
Query: 153 E 153
+
Sbjct: 198 D 198
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 37/187 (19%)
Query: 1139 VFYGNDDFYVLFRLHQTLYER---------------------------IQWAKMNTTGAE 1171
+FY N+++Y+ RLHQ L R I+ K ++ +
Sbjct: 886 LFYVNNNWYIFMRLHQILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQ 945
Query: 1172 MKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRL 1231
++ + + D Y F+ + +LLDG+ID++++ED R + +Y+ FT+DKL+ +
Sbjct: 946 LRLKEPMDVDVEDYYPAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSI 1005
Query: 1232 CKQLQTVAADEMDNKLIQLYEYE----------ESRKPGKQIDSVYYENARVLLHEENIY 1281
+QLQ + +DE+ ++ LY E S+ ++S Y A L+ +EN +
Sbjct: 1006 VRQLQHIVSDEVCVQVTDLYLAENNNGATGGQLNSQTSRSLLESAYQRKAEQLMSDENCF 1065
Query: 1282 RIQLVKS 1288
++ ++S
Sbjct: 1066 KLMFIQS 1072
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 16/103 (15%)
Query: 147 ITLDEDEAPP---KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDI--- 200
+T+ AP + VEF AI +VNKIK RF +YK+FLEIL+ Y+KE ++
Sbjct: 286 VTISLGTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEA 345
Query: 201 ----------NEVYSEVASLFEDHADLLEEFTRFLPDTSATSL 233
EVY++VA LF++ DLL EF +FLPD +++ L
Sbjct: 346 GGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVL 388
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 154 APPKKTVE---------FEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVY 204
APP V+ E+A+++++++K +F + VY FL+I+ ++ + D V
Sbjct: 106 APPVAPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVI 165
Query: 205 SEVASLFEDHADLLEEFTRFLP 226
S V+ LF+ H DL+ F FLP
Sbjct: 166 SRVSQLFKGHPDLIMGFNTFLP 187
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 65 GMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDT--AG---- 118
G + +Q + + A+ Y+ ++K+ FQ Q + Y FLE++ ++ ++ + AG
Sbjct: 291 GTAPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYT 350
Query: 119 -------VIARVKDLFKGHNNLIFGFNTFLP 142
V A+V LFK +L+ F FLP
Sbjct: 351 PALTEQEVYAQVARLFKNQEDLLSEFGQFLP 381
>sp|Q62141|SIN3B_MOUSE Paired amphipathic helix protein Sin3b OS=Mus musculus GN=Sin3b
PE=1 SV=2
Length = 1098
Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/432 (32%), Positives = 215/432 (49%), Gaps = 58/432 (13%)
Query: 317 DDREIEHDNNRDFNLQRFPDKKKSIKKVEGFGANS-SLASYDDKDALKSIYNQGFIFCDK 375
+++ +EH+ R P + KK++ G S+A+ L Q F F DK
Sbjct: 250 EEKSLEHNKKRSRPSLLRPVSAPAKKKMKLRGTKDLSIAAVGKYGTL-----QEFSFFDK 304
Query: 376 VKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFERCENID 434
V+ L S + Y+ FL+C+ +++ ++ ++L LV+ LGK+ +L +F F E
Sbjct: 305 VRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSFLGVKELS- 363
Query: 435 GFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAKSIQELDLSN 494
A MS +S DG +SR E+D ++
Sbjct: 364 --FAPPMSDRS--GDG-ISR----------------------------------EIDYAS 384
Query: 495 CQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLF 554
C+R SYR LP Y P S R+ + +VLND WVS S SED +F ++ YEE L
Sbjct: 385 CKRIGSSYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLH 444
Query: 555 RCEDDRFELDMLLESVSSTAKRAEELLNSINENKITLETPFHLKDHFS----ALNLRCIE 610
RCED+RFELD++LE+ +T + E + ++ + L D + R I
Sbjct: 445 RCEDERFELDVVLETNLATIRVLESVQKKLSRMAPEDQEKLRLDDCLGGTSEVIQRRAIH 504
Query: 611 RLYGDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLD 670
R+YGD +V++ L++NPA A+PV+L RLK K+EEW + + FNK+W E Y K + KSLD
Sbjct: 505 RIYGDKAPEVIESLKRNPATAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLD 564
Query: 671 HRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI-PHLEYGYSDS 729
H++ FKQ D+K L +KSL+ EI+ + Q + + G P PHL + Y D
Sbjct: 565 HQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQH------SEGRSAPSSEPHLIFVYEDR 618
Query: 730 NIHEDLYKLVQY 741
I ED L+ Y
Sbjct: 619 QILEDAAALISY 630
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 116/232 (50%), Gaps = 48/232 (20%)
Query: 68 AGMGTSQKLTT--SDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKD 125
+G G +KL DALTYL +VK F Y+ FLE+MK+FK+Q DT GVI RV
Sbjct: 22 SGSGGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQ 81
Query: 126 LFKGHNNLIFGFNTFLPKGYEITL-----------------------------------D 150
LF H +LI GFN FLP GY I + D
Sbjct: 82 LFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLSSQDNSHSHGDCGEDFKQMSYKED 141
Query: 151 EDEAPPKK-TVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDIN-------- 201
+ P + +VEF AI++VNKIK RF + +Y+SFLEIL+ Y+KE
Sbjct: 142 RGQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMS 201
Query: 202 --EVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQRGNERS 251
EV++EVA+LF DLL EF +FLP+ + + N NS Q+ E+S
Sbjct: 202 EEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGSCEMNSGQKNEEKS 253
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 27/146 (18%)
Query: 1139 VFYGNDDFYVLFRLHQTLYERI---------------------------QWAKMNTTGAE 1171
+F+ N+++Y RLHQTL R+ + K E
Sbjct: 711 LFFANNNWYFFLRLHQTLCARLLKIYRQAQKQLLEHRREQEREQLLCEGRREKAADPAME 770
Query: 1172 MKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRL 1231
++ + E + Y F+ + +LL+GSID ++ED R + +Y+ FT+DKL+ +
Sbjct: 771 LRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYIGFTMDKLVQNI 830
Query: 1232 CKQLQTVAADEMDNKLIQLYEYEESR 1257
+QL + +D++ K+++LY E+ R
Sbjct: 831 ARQLHHLVSDDVCLKVVELYLNEQQR 856
>sp|O75182|SIN3B_HUMAN Paired amphipathic helix protein Sin3b OS=Homo sapiens GN=SIN3B
PE=1 SV=2
Length = 1162
Score = 191 bits (484), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 195/412 (47%), Gaps = 84/412 (20%)
Query: 368 QGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNHF 426
Q F F DKV+ L S + Y+ FL+C+ +++ ++ ++L LV+ LGK+ +L +F F
Sbjct: 306 QEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSF 365
Query: 427 FERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAKS 486
E A MS +S DG +SR
Sbjct: 366 LGVKELS---FAPPMSDRS--GDG-ISR-------------------------------- 387
Query: 487 IQELDLSNCQRCTPSYRLLPDDYPIPSASQRSEL-------------------------- 520
E+D ++C+R SYR LP Y P S R+ +
Sbjct: 388 --EIDYASCKRIGSSYRALPKTYQQPKCSGRTAICKELDHWTLLQGSWTDDYCMSKFKNT 445
Query: 521 ------GAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTA 574
A VLND WVS S SED +F ++ YEE L RCED+RFELD++LE+ +T
Sbjct: 446 CWIPGYSAGVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATI 505
Query: 575 KRAEELLNSINENKITLETPFHLKDHFS----ALNLRCIERLYGDHGLDVMDILRKNPAI 630
+ E + ++ + F L D + R I R+YGD ++++ L+KNP
Sbjct: 506 RVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVT 565
Query: 631 ALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLV 690
A+PV+L RLK K+EEW + + FNK+W E Y K + KSLDH++ FKQ D+K L +KSL+
Sbjct: 566 AVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLL 625
Query: 691 AEIKQFKENKQTEDDVLFVIAAGHRQPVI-PHLEYGYSDSNIHEDLYKLVQY 741
EI+ + Q + + G P PHL + Y D I ED L+ Y
Sbjct: 626 NEIESVYDEHQEQH------SEGRSAPSSEPHLIFVYEDRQILEDAAALISY 671
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 118/236 (50%), Gaps = 48/236 (20%)
Query: 59 VGGGGGGMTAGMGTSQ-KLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTA 117
+ G G + G + + DALTYL +VK F Y+ FLE+MK+FK+Q DT
Sbjct: 21 LSGARWGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTP 80
Query: 118 GVIARVKDLFKGHNNLIFGFNTFLPKGYEITLDED------------------------- 152
GVI RV LF H +LI GFN FLP GY I + ++
Sbjct: 81 GVIRRVSQLFHEHPDLIVGFNAFLPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDF 140
Query: 153 --EAPPKK----------TVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDI 200
+ P K+ +VEF AI++VNKIK RF + +Y+SFLEIL+ Y+KE +
Sbjct: 141 KQQVPYKEDKPQVPLESDSVEFNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNT 200
Query: 201 N----------EVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNIPFVRNSTQR 246
EV++EVA+LF DLL EF +FLP+ + + N P +S Q+
Sbjct: 201 RGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQK 256
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 27/146 (18%)
Query: 1139 VFYGNDDFYVLFRLHQTLYERI---------------------------QWAKMNTTGAE 1171
+F+ N+++Y RLHQTL R+ + K + E
Sbjct: 774 LFFANNNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKEREKLLCEGRREKGSDPAME 833
Query: 1172 MKRRTSKEASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRL 1231
++ + E + Y F+ + +LL+GSID ++ED R + +YV FT+DKL+ +
Sbjct: 834 LRLKQPSEVELEEYYPAFLDMVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQNI 893
Query: 1232 CKQLQTVAADEMDNKLIQLYEYEESR 1257
+QL + +D++ K+++LY E+ R
Sbjct: 894 ARQLHHLVSDDVCLKVVELYLNEKKR 919
>sp|Q09750|PST1_SCHPO Paired amphipathic helix protein pst1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pst1 PE=1 SV=1
Length = 1522
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 150/589 (25%), Positives = 258/589 (43%), Gaps = 104/589 (17%)
Query: 157 KKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHAD 216
K+ + ++AI FVN +K RF + Y SFL+IL Y+ + + I VY +V+ LF + D
Sbjct: 344 KQAADLDQAINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPD 403
Query: 217 LLEEFTRFLPDTSATSLSHNIPFVRNSTQRGNERSAGIPPLRQMQMDKHRRRDRIATSHA 276
LLEEF RFLPD S N+ ++S +P ++ +R + A
Sbjct: 404 LLEEFKRFLPDVSV-----------NAPAETQDKSTVVP--QESATATPKRSPSATPTSA 450
Query: 277 DRDLSVDRPEMDDEKLMIKMQKEQRRRAEKENRDRRNRDQDDREIEHDNNRDFNLQRFPD 336
+ P + ++ + N +R R +E R FN+
Sbjct: 451 LPPIGKFAPPTTAKAQPAPEKRRGEPAVQTRNHSKRTRTATS-SVEETTPRAFNV----- 504
Query: 337 KKKSIKKVEGFGANSSLASYDDKDALKSIYNQGFIFCDKVKEKLCSDD-YQAFLKCLHIY 395
+A + L+ F + ++ L ++ Y F+K L +Y
Sbjct: 505 ---------------PIAQNKNPSELE--------FLEHARQYLANESKYNEFIKLLELY 541
Query: 396 SNGIIKRNDLQNLVTDLLGKYMDLMDEFNHFFERCENIDGFLAGVMSKKSLCNDGHVSRS 455
S + +N L ++ FF E++ +L ++ K + N V R
Sbjct: 542 SQEVFDKNAL--------------VERCYVFFGSNEHLMNWLKDLV-KYNPANPIPVPRP 586
Query: 456 VKIEDKDREHKREMEVTKEKDRYKEKYYAKSIQELDLSNCQRCTPSYRLLPDDYPIPSAS 515
+DL+ C+ C PSYRLLP + S
Sbjct: 587 ---------------------------------RVDLTQCKSCGPSYRLLPKIELLLPCS 613
Query: 516 QRSELGAQVLNDHWVSV-TSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLES----V 570
R +L +LND WVS T SED F R+NQ+EE+L + E++R+E D + + +
Sbjct: 614 GRDDLCWTILNDAWVSFPTLASEDSGFIAHRKNQFEENLHKLEEERYEYDRHIGANMRFI 673
Query: 571 SSTAKRAEELLNSINENKITLETPFHLKDHFSALNLRCIERLYG-DHGLDVMDILRKNPA 629
A+++L K P +L ++ + I+++YG +H +++ L+KNP+
Sbjct: 674 ELLQIHADKMLKMSEVEKANWTLPSNLGGKSVSIYHKVIKKVYGKEHAQQIIENLQKNPS 733
Query: 630 IALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSL 689
+ +P++L RLK+K EW ++ +N++W +I KN Y+SLDH+ FK D K+ + K L
Sbjct: 734 VTIPIVLERLKKKDREWRSLQNHWNELWHDIEEKNFYRSLDHQGVSFKSVDKKSTTPKFL 793
Query: 690 VAEIKQFKENKQTEDDVLFVIAAGHRQPVIPHLEYGYSDSNIHEDLYKL 738
++E++ + ++ E ++ G P L + Y D NI D+ +L
Sbjct: 794 ISELRNLAQQQKVE------LSEGKVTPSHQFL-FSYKDPNIITDIARL 835
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 52/76 (68%)
Query: 74 QKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNL 133
++L +DAL+YL VK F + E Y+ FL++MK+FK+Q +T VI RV LF G+ NL
Sbjct: 178 RQLNVTDALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNL 237
Query: 134 IFGFNTFLPKGYEITL 149
I GFNTFLP GY I +
Sbjct: 238 IQGFNTFLPPGYSIEI 253
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 1140 FYGNDDFYVLFRLHQTLYERIQW--------------AKMNTTGAEM-------KRRTSK 1178
+GN Y FRL TLY R++ K N E+ +R
Sbjct: 1004 LFGNMSLYCFFRLFHTLYSRLEEIKNLEQMAYSKQHDVKSNPVAVELGLVRHPSERLGFA 1063
Query: 1179 EASCSDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTV 1238
+ +Y + + L++G ID FED R + G ++ L+T++KL+ + KQL +V
Sbjct: 1064 LPTADTVYEQAIQLCERLMEGEIDQNGFEDALRCLYGIHAFRLYTVEKLVTSIIKQLHSV 1123
Query: 1239 AADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLHEENIYRIQLVKSF 1289
+ +L Q++ Y E + + R ++ +YRIQ +F
Sbjct: 1124 TTNR---RLAQVFMYYEKDRVQR----------RTSPRQQIMYRIQTETAF 1161
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 44/75 (58%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
+A+++++ +K +FH + +Y FL+I+ ++ + + EV + V+ LF + +L++ F
Sbjct: 184 DALSYLDLVKLQFHQEPEIYNEFLDIMKEFKSQAIETPEVITRVSKLFAGYPNLIQGFNT 243
Query: 224 FLPDTSATSLSHNIP 238
FLP + +S P
Sbjct: 244 FLPPGYSIEISSADP 258
Score = 38.1 bits (87), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 81 ALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTF 140
A+ ++ VK+ F + E Y+ FL+++K ++ + V +V LF +L+ F F
Sbjct: 352 AINFVNNVKNRFSHKPEAYNSFLDILKSYQHDQRPIQLVYFQVSQLFAEAPDLLEEFKRF 411
Query: 141 LP 142
LP
Sbjct: 412 LP 413
>sp|P22579|SIN3_YEAST Transcriptional regulatory protein SIN3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIN3 PE=1 SV=2
Length = 1536
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 179/380 (47%), Gaps = 57/380 (15%)
Query: 367 NQGFIFCDKVKEKLCSDD-YQAFLKCLHIYSNGIIKRNDLQNLVTDLLGKYMDLMDEFNH 425
N+ F +K K + + Y FLK L++YS I+ +DL V LG +L F +
Sbjct: 663 NEEVTFFEKAKRYIGNKHLYTEFLKILNLYSQDILDLDDLVEKVDFYLGSNKELFTWFKN 722
Query: 426 FFERCENIDGFLAGVMSKKSLCNDGHVSRSVKIEDKDREHKREMEVTKEKDRYKEKYYAK 485
F G+ ++ IE+ + EK R
Sbjct: 723 FV----------------------GYQEKTKCIEN----------IVHEKHR-------- 742
Query: 486 SIQELDLSNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVS-VTSGSEDYSFKHM 544
LDL C+ PSY+ LP S R ++ +VLND WV SED F
Sbjct: 743 ----LDLDLCEAFGPSYKRLPKSDTFMPCSGRDDMCWEVLNDEWVGHPVWASEDSGFIAH 798
Query: 545 RRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEELLNSI---NEN-KITLETPFHLKDH 600
R+NQYEE+LF+ E++R E D +ES T + E ++N I EN K + P L
Sbjct: 799 RKNQYEETLFKIEEERHEYDFYIESNLRTIQCLETIVNKIENMTENEKANFKLPPGLGHT 858
Query: 601 FSALNLRCIERLY-GDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAE 659
+ + I ++Y + G +++D L ++PA+ PV+L RLKQK EEW + + ++NKVW E
Sbjct: 859 SMTIYKKVIRKVYDKERGFEIIDALHEHPAVTAPVVLKRLKQKDEEWRRAQREWNKVWRE 918
Query: 660 IYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKQFKENKQTEDDVLFVIAAGHRQPVI 719
+ K +KSLDH FKQ D K L+TK L++EI K + QT + ++ Q
Sbjct: 919 LEQKVFFKSLDHLGLTFKQADKKLLTTKQLISEISSIKVD-QTNKKIHWLTPKPKSQ--- 974
Query: 720 PHLEYGYSDSNIHEDLYKLV 739
L++ + D NI D+ L
Sbjct: 975 --LDFDFPDKNIFYDILCLA 992
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 141 LPKGYEITLDEDEAPPKKTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDI 200
+P+ + ED A VEF +AI++VNKIK RF + +YK FLEIL Y++E K I
Sbjct: 388 IPQSQSLVPQED-AKKNVDVEFSQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPI 446
Query: 201 NEVYSEVASLFEDHADLLEEFTRFLPDTSATS 232
NEVY++V LF++ DLLE+F +FLPD+SA++
Sbjct: 447 NEVYAQVTHLFQNAPDLLEDFKKFLPDSSASA 478
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%)
Query: 76 LTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIF 135
L DAL+YL++VK F + + Y++FL++MKDFK+Q DT GVI RV LF+G+ LI
Sbjct: 219 LNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPILIQ 278
Query: 136 GFNTFLPKGYEI 147
GFNTFLP+GY I
Sbjct: 279 GFNTFLPQGYRI 290
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 36/177 (20%)
Query: 1140 FYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASC----------------- 1182
+ N + Y+ FR T+YER+ K +M R +KE +
Sbjct: 1138 LFANTNIYIFFRHWTTIYERLLEIK------QMNERVTKEINTRSTVTFAKDLDLLSSQL 1191
Query: 1183 ---------SDLYARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCK 1233
D Y + + L++G +++ FE+ R N+++ L+T+DK+ L K
Sbjct: 1192 SEMGLDFVGEDAYKQVLRLSRRLINGDLEHQWFEESLRQAYNNKAFKLYTIDKVTQSLVK 1251
Query: 1234 QLQTVAADEMDNKLIQLYEYEESRKPGKQIDSVYYENARVLLH---EENIYRIQLVK 1287
T+ D +++ L+ + + D + Y +V H EN++RI+ K
Sbjct: 1252 HAHTLMTDAKTAEIMALFVKDRNASTTSAKDQIIYR-LQVRSHMSNTENMFRIEFDK 1307
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 79 SDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFN 138
S A++Y+ ++K F DQ + Y FLE+++ ++ ++ V A+V LF+ +L+ F
Sbjct: 409 SQAISYVNKIKTRFADQPDIYKHFLEILQTYQREQKPINEVYAQVTHLFQNAPDLLEDFK 468
Query: 139 TFLP 142
FLP
Sbjct: 469 KFLP 472
Score = 41.2 bits (95), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 141 LPKGYEITLDEDEAP--PKKT------VEFEEAITFVNKIKKRFHNDEHVYKSFLEILNM 192
+P EI LD P P+ T + E +TF K KR+ ++H+Y FL+ILN+
Sbjct: 633 IPVRPEIDLDPSIVPVVPEPTEPIENNISLNEEVTFFEK-AKRYIGNKHLYTEFLKILNL 691
Query: 193 YRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPDTSATSLSHNI 237
Y ++ D++++ +V + +L F F+ T NI
Sbjct: 692 YSQDILDLDDLVEKVDFYLGSNKELFTWFKNFVGYQEKTKCIENI 736
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 40/69 (57%)
Query: 158 KTVEFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADL 217
+ + ++A++++ ++K +F + +Y FL+I+ ++ + D V V++LF + L
Sbjct: 217 RPLNVKDALSYLEQVKFQFSSRPDIYNLFLDIMKDFKSQAIDTPGVIERVSTLFRGYPIL 276
Query: 218 LEEFTRFLP 226
++ F FLP
Sbjct: 277 IQGFNTFLP 285
>sp|O74755|PST3_SCHPO Paired amphipathic helix protein pst3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pst3 PE=3 SV=1
Length = 1154
Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 131/274 (47%), Gaps = 71/274 (25%)
Query: 47 GGGGAGAGGGSGVGGGGGGMTA----GMGTS--QKLTTSDALTYLKEVKDMFQDQREKYD 100
G + S + G G +++ G+ +S + L +DAL+YL+ VK F ++RE Y+
Sbjct: 78 GKTIVSSLALSSISGKDGSISSQNAEGLSSSSNRPLDVNDALSYLELVKYYFSERREIYN 137
Query: 101 MFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTFLP------------------ 142
FLE+M+DFK+Q DT GVI RV +LF G+ LI GFNTFLP
Sbjct: 138 RFLEIMRDFKSQALDTLGVINRVSELFNGYPQLIEGFNTFLPSGYKIEVQLDSSNTSVVR 197
Query: 143 ----------KGYEITL-----DEDE----------------AP--------PKKTVEFE 163
+G + TL +ED+ AP K V+F
Sbjct: 198 VGTPMHPLPQQGVQSTLPVAPSNEDQRTMESTSPTDSQPQPSAPNLVSSTENEKPRVDFN 257
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
AI ++NK+K R+ + Y FL +L Y+K K I EV + VA +F+D DLLEEF
Sbjct: 258 YAIAYMNKVKARYPPNSDTYMEFLGVLRTYQKAQKSIFEVRARVAEIFKDSPDLLEEFKL 317
Query: 224 FLPDTSATSLSHNIPFVRNSTQRGNERSAGIPPL 257
FLPD + S + P V+ S R +PP+
Sbjct: 318 FLPD-NVDSTEPSTPNVQKSPNR-------LPPV 343
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 7/196 (3%)
Query: 501 SYRLLPDDYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDR 560
+YR LPD + S R +L VLND ++SV NQY ++L ED+R
Sbjct: 499 TYRKLPDSWKQDKCSGRDDLDNSVLNDDYISVAPKPSHVKNIMHHENQYLQALQLVEDER 558
Query: 561 FELDMLLESVSSTAKRAEELLNSINENKIT--LETPFHLKDHFSALNLRCIERLYG-DHG 617
++ D +L + S K +L + E I LET + + + +YG +H
Sbjct: 559 YDYDRVLNTTESAIK----ILANFCEPTIHEHLETALQELERSKRIIKNALIIVYGKEHA 614
Query: 618 LDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKNHYKSLDHRSFYFK 677
+D L K A PV+L R+K K +EW + + +++K+W +I KN + D R +
Sbjct: 615 NLALDTLFKKLPTAAPVLLKRIKTKDQEWRRSKREWSKIWRQIEKKNAQAAFDDRYCRIE 674
Query: 678 QQDSKNLSTKSLVAEI 693
+D + LS ++ +I
Sbjct: 675 GRDRRGLSYSRILRDI 690
Score = 39.7 bits (91), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 8/147 (5%)
Query: 1140 FYGNDDFYVLFRLHQTLYERIQWAKMNTTGAEMKRRTSKEASCSDLYARFMTALYNLLDG 1199
F+GN YVLFRL Y R++ K+ + + AS + Y + L G
Sbjct: 846 FFGNATMYVLFRLICVCYSRLEHIKLFVESSTIY------ASSTGGYENILNICEKYLKG 899
Query: 1200 SIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAADEMDNKLIQLYEYEESRKP 1259
S +F + Y++ ++++LL + ++ + D +L+ L+E + +
Sbjct: 900 SCSRLEFRKYLQKFNNETCYMICSIERLLKVIFYRIHEILLDPKLGQLLLLFESDGANSV 959
Query: 1260 GKQIDSVYYEN--ARVLLHEENIYRIQ 1284
+ + Y N +L E I+ ++
Sbjct: 960 TTPREQMVYRNHVESILAPESKIFNMR 986
>sp|O13919|PST2_SCHPO Paired amphipathic helix protein pst2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pst2 PE=1 SV=1
Length = 1075
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 493 SNCQRCTPSYRLLPDDYPIPSASQRSELGAQVLNDHWVS-VTSGSEDYSFKHMRRNQYEE 551
S+ C PSYRLLP + S S R + +LND WVS T SE+ F R+ YEE
Sbjct: 332 SDFPECGPSYRLLPVEERNISCSGRDDFAWGILNDDWVSHPTWASEESGFIVQRKTPYEE 391
Query: 552 SLFRCEDDRFELDMLLESVSSTAKRAEELLNSINE------NKITLETPFHLKDHFSALN 605
++ + E++R+E D +E+ S T K +++ N INE TLE L ++
Sbjct: 392 AMTKLEEERYEFDRHIEATSWTIKSLKKIQNRINELPEEERETYTLEEGLGLPS--KSIY 449
Query: 606 LRCIERLY-GDHGLDVMDILRKNPAIALPVMLTRLKQKQEEWTKCRSDFNKVWAEIYAKN 664
+ I+ +Y +H ++ L + P + LP++++RL++K EEW + W I KN
Sbjct: 450 KKTIKLVYTSEHAEEMFKALERMPCLTLPLVISRLEEKNEEWKSVKRSLQPGWRSIEFKN 509
Query: 665 HYKSLDHRSFYFKQQDSKNLSTKSLVAE 692
+ KSLD + YFK +D KN+S+K L+AE
Sbjct: 510 YDKSLDSQCVYFKARDKKNVSSKFLLAE 537
Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 1141 YGNDDFYVLFRLHQTLYERI--------------QWAKMNTTGAEMKRRTSKEASCSDL- 1185
+G YV FRL LYER+ Q N + K + SD+
Sbjct: 744 FGYSSMYVFFRLFNLLYERLYELQRLEDQVSIIQQRIIPNPVSQKQKIWRDRWNDLSDVP 803
Query: 1186 -----YARFMTALYNLLDGSIDNAKFEDECRAIIGNQSYVLFTLDKLLYRLCKQLQTVAA 1240
Y + L+ G +D + FED R GN++Y ++T+DKL++ KQ+ + +
Sbjct: 804 DEKTHYENTYVMILRLIYGIVDQSAFEDYLRFYYGNKAYKIYTIDKLVWSAAKQVHHIVS 863
Query: 1241 DEMDNKLIQLYEYEESRKPGKQIDSVYY--ENARVLLHEENIYRIQLVKSFELF 1292
D + L E S P K D Y E ++L +E ++R + F+ F
Sbjct: 864 DGKYKFVTSLVEQNSSASPKKNYDDFLYRLEIEKLLNPDEILFRFCWINKFKSF 917
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 99 YDMFLEVMKDFKAQRTDTAGVIARVKDLFKGHNNLIFGFNTFLPKGYEITLDEDEA---- 154
Y F++V+K + D G I R+ + + + +L+ N FLP Y+ L A
Sbjct: 57 YSAFMDVVKALHNEIVDFPGFIERISVILRDYPDLLEYLNIFLPSSYKYLLSNSGANFTL 116
Query: 155 ----------PPKKTV--------EFEEAITFVNKIKKRFHNDEHVYKSFLEILNMYRKE 196
P V + AI FV+++++ ++ + + L ++
Sbjct: 117 QFTTPSGPVSTPSTYVATYNDLPCTYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNS 176
Query: 197 HKDINEVYSEVASLFEDHADLLEEFTRFLPDT 228
++E+ + V SL +H L EF FLP +
Sbjct: 177 ECSLSELQTIVTSLLAEHPSLAHEFHNFLPSS 208
Score = 38.5 bits (88), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 168 FVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTRFLPD 227
FV K+ +R + +VY +F++++ E D ++ + D+ DLLE FLP
Sbjct: 42 FVQKLGQRLCHRPYVYSAFMDVVKALHNEIVDFPGFIERISVILRDYPDLLEYLNIFLPS 101
Query: 228 TSATSLSHN 236
+ LS++
Sbjct: 102 SYKYLLSNS 110
Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 353 LASYDDKDALKSIYNQGFIFCDKVKEKLCSDDYQAF--LKCLHIYSNGIIKRNDLQNLVT 410
+A+Y+D L Y++ F +V+ L S+ Q F L + N ++LQ +VT
Sbjct: 132 VATYND---LPCTYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNSECSLSELQTIVT 188
Query: 411 DLLGKYMDLMDEFNHFF 427
LL ++ L EF++F
Sbjct: 189 SLLAEHPSLAHEFHNFL 205
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 67/94 (71%), Gaps = 8/94 (8%)
Query: 63 GGGMTAGMGTSQKLTTSDALTYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIAR 122
GGG G+ TT DAL YLK VKD F+D EKYD FLEV+ D K Q DT+GVIAR
Sbjct: 297 GGGNMGGV------TTGDALNYLKAVKDKFEDS-EKYDTFLEVLNDCKHQGVDTSGVIAR 349
Query: 123 VKDLFKGHNNLIFGFNTFLPKGYEIT-LDEDEAP 155
+KDLFKGH++L+ GFNT+L K Y+IT L ED+ P
Sbjct: 350 LKDLFKGHDDLLLGFNTYLSKEYQITILPEDDFP 383
Score = 40.8 bits (94), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 164 EAITFVNKIKKRFHNDEHVYKSFLEILNMYRKEHKDINEVYSEVASLFEDHADLLEEFTR 223
+A+ ++ +K +F + E Y +FLE+LN + + D + V + + LF+ H DLL F
Sbjct: 308 DALNYLKAVKDKFEDSEK-YDTFLEVLNDCKHQGVDTSGVIARLKDLFKGHDDLLLGFNT 366
Query: 224 FL 225
+L
Sbjct: 367 YL 368
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 534,439,069
Number of Sequences: 539616
Number of extensions: 25432047
Number of successful extensions: 265158
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 969
Number of HSP's that attempted gapping in prelim test: 161421
Number of HSP's gapped (non-prelim): 46980
length of query: 1353
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1223
effective length of database: 121,419,379
effective search space: 148495900517
effective search space used: 148495900517
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)