Your job contains 1 sequence.
>000684
MSHLFDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRK
MVSREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEAT
WEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDY
QLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSN
WAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAV
LSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDH
DKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMS
PLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSIN
DTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLD
GSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAM
SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGN
ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDEILERAEKVEEKEAEGEAGNELLSAFK
VANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSEL
QEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQIS
LIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLIN
RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE
NIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANALLEMELAAVGAKNVNAKVGRKA
SKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSD
NEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLPKEKVASVFPSFCWHIPLY
SRIKHLTSLLFFHFIQVLSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMRLWNYVSTF
SNLSGEKLHQIYSKLKQERQEEAGIGPSHINGSASGSIDNDLNFSTFNRHAERQKGHKNV
STYQMTEPIHKGIDPKKFEAWKRRRRAETDMYSQAQPMLQRPMNNGTRLPDPNSLGILGA
APTDNRRFVTERRYPMRQTGFPPRQGFPSGIN
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000684
(1352 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2041644 - symbol:CHR5 "chromatin remodeling 5"... 4617 0. 2
UNIPROTKB|O14647 - symbol:CHD2 "Chromodomain-helicase-DNA... 1793 8.4e-213 3
DICTYBASE|DDB_G0284171 - symbol:DDB_G0284171 "CHR group p... 1762 2.9e-208 3
UNIPROTKB|E1C1A9 - symbol:CHD2 "Uncharacterized protein" ... 1782 3.7e-206 3
UNIPROTKB|D4AD08 - symbol:Chd2 "Chromodomain helicase DNA... 1790 1.4e-205 2
FB|FBgn0250786 - symbol:Chd1 "Chromodomain-helicase-DNA-b... 1765 1.0e-204 4
UNIPROTKB|B6ZLK2 - symbol:CHD1 "Chromodomain-helicase-DNA... 1823 2.6e-195 2
UNIPROTKB|J9P6Y8 - symbol:CHD1 "Uncharacterized protein" ... 1820 6.9e-195 2
UNIPROTKB|J9NX79 - symbol:CHD2 "Uncharacterized protein" ... 1799 9.4e-195 3
UNIPROTKB|E2QUI5 - symbol:CHD1 "Uncharacterized protein" ... 1820 1.4e-194 2
UNIPROTKB|O14646 - symbol:CHD1 "Chromodomain-helicase-DNA... 1820 3.0e-194 2
WB|WBGene00010369 - symbol:chd-1 species:6239 "Caenorhabd... 1875 1.5e-193 1
UNIPROTKB|I3LQZ8 - symbol:CHD2 "Uncharacterized protein" ... 1811 4.3e-193 2
UNIPROTKB|I3L6N4 - symbol:CHD1 "Uncharacterized protein" ... 1804 1.1e-192 2
UNIPROTKB|I3LIS2 - symbol:CHD1 "Uncharacterized protein" ... 1804 1.1e-192 2
UNIPROTKB|F1RN66 - symbol:CHD1 "Uncharacterized protein" ... 1804 1.1e-192 2
UNIPROTKB|F1MGF2 - symbol:CHD1 "Uncharacterized protein" ... 1797 6.3e-192 2
UNIPROTKB|J9PA90 - symbol:CHD2 "Uncharacterized protein" ... 1795 2.1e-191 2
UNIPROTKB|F1SA77 - symbol:CHD2 "Uncharacterized protein" ... 1793 2.7e-191 2
UNIPROTKB|E2R5Z7 - symbol:CHD2 "Uncharacterized protein" ... 1789 9.1e-191 2
UNIPROTKB|G3MXX3 - symbol:CHD2 "Uncharacterized protein" ... 1784 6.4e-190 2
MGI|MGI:88393 - symbol:Chd1 "chromodomain helicase DNA bi... 1821 7.9e-188 1
POMBASE|SPAC1783.05 - symbol:hrp1 "ATP-dependent DNA heli... 1772 5.9e-187 2
ZFIN|ZDB-GENE-050419-256 - symbol:chd2 "chromodomain heli... 1808 1.9e-186 1
UNIPROTKB|J9NSS6 - symbol:CHD2 "Uncharacterized protein" ... 1795 4.5e-185 1
UNIPROTKB|F1NP27 - symbol:CHD1 "Chromodomain-helicase-DNA... 1714 7.6e-185 2
UNIPROTKB|F1N8K8 - symbol:CHD1 "Chromodomain-helicase-DNA... 1709 2.6e-184 2
UNIPROTKB|I3LRQ2 - symbol:CHD2 "Uncharacterized protein" ... 1774 7.6e-183 1
POMBASE|SPAC3G6.01 - symbol:hrp3 "ATP-dependent DNA helic... 1636 1.0e-182 3
SGD|S000000966 - symbol:CHD1 "Chromatin remodeler that re... 1630 1.1e-181 2
CGD|CAL0001390 - symbol:orf19.3035 species:5476 "Candida ... 1601 4.3e-180 3
UNIPROTKB|H9L0N0 - symbol:H9L0N0 "Uncharacterized protein... 1455 1.0e-172 3
RGD|1306794 - symbol:Chd1 "chromodomain helicase DNA bind... 1563 1.7e-160 1
ASPGD|ASPL0000052010 - symbol:AN1255 species:162425 "Emer... 1509 6.0e-159 2
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 1321 2.7e-156 4
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 1321 3.4e-156 4
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 1321 3.4e-156 4
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 1321 3.4e-156 4
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 1321 3.8e-156 4
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 1321 3.8e-156 4
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 1321 4.1e-156 4
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 1321 6.3e-156 4
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 1312 8.7e-156 4
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 1321 8.9e-156 4
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 1312 3.7e-155 4
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 1311 2.2e-153 4
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 1314 4.4e-153 3
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 1310 6.9e-153 3
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 1289 9.3e-153 4
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 1312 1.0e-152 4
DICTYBASE|DDB_G0280705 - symbol:DDB_G0280705 "CHR group p... 1387 2.5e-152 6
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 1314 3.0e-152 3
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 1297 5.0e-151 4
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 1309 1.3e-150 3
WB|WBGene00002637 - symbol:let-418 species:6239 "Caenorha... 1283 2.6e-150 4
UNIPROTKB|G5EBZ4 - symbol:let-418 "Protein let-418" speci... 1283 2.6e-150 4
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101... 1309 5.5e-150 3
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 1309 7.0e-150 3
UNIPROTKB|F1M7Q0 - symbol:Chd3 "Protein Chd3" species:101... 1309 8.1e-150 3
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 1309 1.4e-149 3
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 1306 1.5e-149 3
TAIR|locus:2040184 - symbol:PKL "PICKLE" species:3702 "Ar... 1389 1.5e-149 2
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 1306 1.6e-149 3
WB|WBGene00000482 - symbol:chd-3 species:6239 "Caenorhabd... 1267 4.0e-148 4
UNIPROTKB|Q22516 - symbol:chd-3 "Chromodomain-helicase-DN... 1267 4.0e-148 4
FB|FBgn0086902 - symbol:kis "kismet" species:7227 "Drosop... 1381 3.1e-144 4
RGD|620696 - symbol:Chd8 "chromodomain helicase DNA bindi... 1348 4.1e-144 4
UNIPROTKB|E2QUR1 - symbol:CHD8 "Uncharacterized protein" ... 1347 1.6e-143 3
UNIPROTKB|Q9HCK8 - symbol:CHD8 "Chromodomain-helicase-DNA... 1350 2.9e-143 3
UNIPROTKB|F1NSG3 - symbol:CHD7 "Chromodomain-helicase-DNA... 1357 3.3e-143 3
UNIPROTKB|F1NLW6 - symbol:CHD6 "Uncharacterized protein" ... 1353 9.1e-143 3
UNIPROTKB|F1NLV5 - symbol:CHD6 "Uncharacterized protein" ... 1353 9.5e-143 3
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 1241 2.4e-142 3
UNIPROTKB|F1MLB2 - symbol:CHD8 "Uncharacterized protein" ... 1339 2.9e-142 3
MGI|MGI:1915022 - symbol:Chd8 "chromodomain helicase DNA ... 1347 5.4e-142 3
ZFIN|ZDB-GENE-030131-6320 - symbol:chd8 "chromodomain hel... 1365 5.9e-142 3
UNIPROTKB|F1S8J5 - symbol:CHD8 "Uncharacterized protein" ... 1339 6.8e-142 3
UNIPROTKB|F1N734 - symbol:CHD6 "Uncharacterized protein" ... 1373 7.3e-142 2
UNIPROTKB|E2QUS7 - symbol:CHD8 "Uncharacterized protein" ... 1339 9.3e-142 3
UNIPROTKB|F1NVT7 - symbol:CHD6 "Uncharacterized protein" ... 1353 1.3e-141 2
UNIPROTKB|F1PTH3 - symbol:CHD6 "Uncharacterized protein" ... 1368 1.5e-141 2
UNIPROTKB|J9P0F6 - symbol:CHD6 "Uncharacterized protein" ... 1368 1.5e-141 2
UNIPROTKB|Q06A37 - symbol:CHD7 "Chromodomain-helicase-DNA... 1357 2.0e-141 3
UNIPROTKB|Q8TD26 - symbol:CHD6 "Chromodomain-helicase-DNA... 1365 2.5e-141 2
UNIPROTKB|E1BS47 - symbol:CHD7 "Chromodomain-helicase-DNA... 1338 2.7e-141 2
UNIPROTKB|B5DE69 - symbol:chd8 "Chromodomain-helicase-DNA... 1348 6.2e-141 2
UNIPROTKB|F1PWD8 - symbol:CHD7 "Uncharacterized protein" ... 1351 8.4e-141 3
UNIPROTKB|K7EMY3 - symbol:CHD5 "Chromodomain-helicase-DNA... 1312 3.1e-140 3
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 1303 3.2e-140 3
UNIPROTKB|E1BPM4 - symbol:CHD7 "Uncharacterized protein" ... 1337 5.3e-140 3
MGI|MGI:1924001 - symbol:Chd9 "chromodomain helicase DNA ... 1333 7.6e-140 3
UNIPROTKB|Q9P2D1 - symbol:CHD7 "Chromodomain-helicase-DNA... 1347 7.6e-140 3
MGI|MGI:2444748 - symbol:Chd7 "chromodomain helicase DNA ... 1341 1.6e-139 3
RGD|1311921 - symbol:Chd7 "chromodomain helicase DNA bind... 1339 1.6e-139 3
UNIPROTKB|E1BDZ3 - symbol:CHD9 "Uncharacterized protein" ... 1343 8.2e-139 2
UNIPROTKB|E1BS48 - symbol:CHD9 "Uncharacterized protein" ... 1331 1.2e-138 3
UNIPROTKB|Q3L8U1 - symbol:CHD9 "Chromodomain-helicase-DNA... 1341 1.3e-138 2
ZFIN|ZDB-GENE-030131-497 - symbol:chd9 "chromodomain heli... 1327 1.7e-138 3
UNIPROTKB|E2RDK8 - symbol:CHD9 "Uncharacterized protein" ... 1340 1.7e-138 2
ZFIN|ZDB-GENE-070912-179 - symbol:chd7 "chromodomain heli... 1321 5.6e-138 3
WARNING: Descriptions of 479 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 4617 (1630.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 899/1131 (79%), Positives = 975/1131 (86%)
Query: 1 MSHLFDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRK 60
+S LFD+EPDWNEMEFLIKWKGQSHLHCQWK+ ++LQNLSGFKKVLNY KKV E++R+R
Sbjct: 449 VSQLFDTEPDWNEMEFLIKWKGQSHLHCQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRT 508
Query: 61 MVSREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEAT 120
+SREEIE+NDVSKEMDLDIIKQNSQVERIIADRISKD G+V EYLVKW+GLSYAEAT
Sbjct: 509 ALSREEIEVNDVSKEMDLDIIKQNSQVERIIADRISKDGLGDVVPEYLVKWQGLSYAEAT 568
Query: 121 WEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDY 180
WEKD I FAQ AIDEYKARE ++A QGKMV+ QR KGKASLRKLDEQPEWL GG LRDY
Sbjct: 569 WEKDVDIAFAQVAIDEYKAREVSIAVQGKMVEQQRTKGKASLRKLDEQPEWLIGGTLRDY 628
Query: 181 QLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSN 240
QLEGLNFLVNSW NDTNVILADEMGLGKTVQSVSMLGFLQN QQIPGPFLVVVPLSTL+N
Sbjct: 629 QLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLAN 688
Query: 241 WAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAV 300
WAKEFRKWLP MN+IVYVGTRASREVCQQYEFYN+KKVGRPIKFN LLTTYEVVLKDKAV
Sbjct: 689 WAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRPIKFNALLTTYEVVLKDKAV 748
Query: 301 LSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDH 360
LSKIKW YLMVDEAHRLKNSEAQLYT L EFSTKNKLLITGTPLQNSVEELWALLHFLD
Sbjct: 749 LSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDP 808
Query: 361 DKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMS 420
KFK+KD+F++NYKNLSSFNE+ELANLH+ELRPHILRR+IKDVEKSLPPKIERILRVEMS
Sbjct: 809 GKFKNKDEFVENYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMS 868
Query: 421 PLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSIN 480
PLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD IN
Sbjct: 869 PLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD--IN 926
Query: 481 DTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLD 540
D SKL++IILSSGKLVILDKLLVRL ETKHRVLIFSQMVRMLDILAEY+S +GFQFQRLD
Sbjct: 927 DNSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLD 986
Query: 541 GSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAM 600
GSTKAELR QAMDHFNAP S+DFCFLLSTRAGGLGINLATADTV+IFDSDWNPQNDLQAM
Sbjct: 987 GSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAM 1046
Query: 601 SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKG- 659
SRAHRIGQQEVVNIYRFVTSKSVEE+ILERAK+KMVLDHLVIQKLNAEG +++ +KG
Sbjct: 1047 SRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETKKGS 1106
Query: 660 ----NELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXX 715
NELSAILRFGAEELFKED+NDEESKKRLL MDID
Sbjct: 1107 NFDKNELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEQVEEKHTDETEHELL 1166
Query: 716 XSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKK 775
AFKVANFC AEDDGSFWSRWIKP++V AE+ALAPRAARNTKSY + + P+R++KRKK
Sbjct: 1167 -GAFKVANFCNAEDDGSFWSRWIKPDSVVTAEEALAPRAARNTKSYVDPSHPDRTSKRKK 1225
Query: 776 KGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGN 835
KGSE E ER KRRK E+ VPS P ++G SAQVR WSYGNL KRDA RFYR VMKFGN
Sbjct: 1226 KGSEPPEHTERSQKRRKTEYFVPSTPLLEGTSAQVRGWSYGNLPKRDAQRFYRTVMKFGN 1285
Query: 836 QSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKA 895
+Q++ IA + GG V AP+E VELFD LIDGC+E+VE G+ +PKGP +LDFFGV VKA
Sbjct: 1286 HNQMACIAEEVGGVVEAAPEEAQVELFDALIDGCKESVETGNFEPKGP-VLDFFGVPVKA 1344
Query: 896 NDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHG 955
N+L+ RV+ LQLL+KRISRY DPI QFRVLSYLKPSNWSKGCGWNQ DDARLLLGI YHG
Sbjct: 1345 NELLKRVQGLQLLSKRISRYNDPISQFRVLSYLKPSNWSKGCGWNQIDDARLLLGILYHG 1404
Query: 956 FGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANALLEMELXXXXXXXXXXX 1015
FGNWE IRLDE LGLTKKIAPVELQHHETFLPRAPNLKERA ALLEMEL
Sbjct: 1405 FGNWEKIRLDESLGLTKKIAPVELQHHETFLPRAPNLKERATALLEMELAAAGGKNTNAK 1464
Query: 1016 XXRKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEE 1075
RK SKK ++ N++N RD++GK G A V+ +TKD K Q+ E PL KEE
Sbjct: 1465 ASRKNSKKVKD---NLINQ-FKAPARDRRGKSGPANVSLLSTKDGPRKTQKAE-PLVKEE 1519
Query: 1076 GEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLPKEKV 1126
GEMSD+ EVYEQFKE KWMEWCEDV+ADEI+TL RLQRLQ TS +LPKEKV
Sbjct: 1520 GEMSDDGEVYEQFKEQKWMEWCEDVLADEIKTLGRLQRLQTTSADLPKEKV 1570
Score = 431 (156.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 89/157 (56%), Positives = 112/157 (71%)
Query: 1156 QVLSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKL 1215
+VL KIR YL+++GRRID IVLEHEE+LYKQDRMTMRLWNYVSTFSNLSG++L+QIYSKL
Sbjct: 1569 KVLFKIRRYLEILGRRIDAIVLEHEEDLYKQDRMTMRLWNYVSTFSNLSGDRLNQIYSKL 1628
Query: 1216 KQERQEEAGIGPSHINGSASGSIDNDLNFSTFNRHAERQKGHKNVSTYQMTEPIHKGIDP 1275
KQE++EE G+GPSH+NGS NF +RQ+ K Q ++ +HKGID
Sbjct: 1629 KQEKEEEEGVGPSHLNGSR--------NF-------QRQQKFKTAGNSQGSQQVHKGIDT 1673
Query: 1276 KKFEAWKRRRRAETDMYSQAQPMLQRPMNNGTRLPDP 1312
KFEAWKRRRR E D+ ++ +P + + G P P
Sbjct: 1674 AKFEAWKRRRRTENDVQTE-RPTITNSNSLGILGPGP 1709
Score = 171 (65.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 42/97 (43%), Positives = 55/97 (56%)
Query: 1248 NRHAERQKGHKNVSTYQMTEPIHKGIDPKKFEAWKRRRRAETDMYSQAQPMLQRPMNNGT 1307
+R+ +RQ+ K Q ++ +HKGID KFEAWKRRRR E D+ ++ RP
Sbjct: 1646 SRNFQRQQKFKTAGNSQGSQQVHKGIDTAKFEAWKRRRRTENDVQTE------RPT---- 1695
Query: 1308 RLPDPNSLGILGAAPTDNRRFVTERRYPMRQTGFPPR 1344
+ + NSLGILG P D R + RQTGFPPR
Sbjct: 1696 -ITNSNSLGILGPGPLD-------RSHRARQTGFPPR 1724
Score = 67 (28.6 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 21/94 (22%), Positives = 44/94 (46%)
Query: 74 KEMDLDIIKQN-SQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE--KD------ 124
K M D+ N S V +++ + N E+L+KWKG S+ W+ D
Sbjct: 431 KGMGEDVQTNNKSTVPVLVSQLFDTEPDWN-EMEFLIKWKGQSHLHCQWKTLSDLQNLSG 489
Query: 125 --EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRK 156
+++++ + +E + R A E+ ++ D+ ++
Sbjct: 490 FKKVLNYTKKVTEEIRYRTALSREEIEVNDVSKE 523
Score = 48 (22.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 1032 LNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEV 1091
LN S+LK++K+ + G + +++ F + Q+ K G +++V++
Sbjct: 1621 LNQIYSKLKQEKEEEEGVGPSHLNGSRN-FQRQQKF-----KTAGNSQGSQQVHKGIDTA 1674
Query: 1092 KWMEW 1096
K+ W
Sbjct: 1675 KFEAW 1679
Score = 44 (20.5 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 652 RRKKQRKGNELSAILRFGAEELFKEDR 678
RR + G + AI+ E+L+K+DR
Sbjct: 1575 RRYLEILGRRIDAIVLEHEEDLYKQDR 1601
Score = 44 (20.5 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 1194 WNYVSTFSNLSG-EKLHQIYSKLKQERQEEAGIGPSHINGSASGSIDNDLNFSTFNRHAE 1252
W +S NLSG +K+ K+ +E + + I + S + DL+ N E
Sbjct: 478 WKTLSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVN-DVSKEMDLDIIKQNSQVE 536
Query: 1253 R 1253
R
Sbjct: 537 R 537
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 1144 KHLTSLLFFHFIQVLSKIRNYLQLIGRRIDQIVLEHEEELYKQ 1186
KH L+F +++L + YL L G + ++ + EL +Q
Sbjct: 955 KHRV-LIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQ 996
Score = 41 (19.5 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 468 SADHGYGGDTSINDTSKLERIILS 491
S HG G D S D E I LS
Sbjct: 269 SKKHGQGWDVSDEDPESDEEIDLS 292
Score = 40 (19.1 bits), Expect = 6.7e-33, Sum P(3) = 6.7e-33
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 755 ARNTKS-YAEA--NEPERSNKRKKK-------GSELQEPQERVHKRRKAEFSVPS 799
A++++S Y EA +E SN R +K +E +E ++K + + VP+
Sbjct: 117 AKDSQSGYKEAYHSEDNHSNDRSEKLDSENENDNENEEEDNEMNKHQSGQADVPA 171
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 1200 FSNLSGEKL-HQIYSKLKQERQEEAGIGPSHINGSASGS 1237
F N S + + H + + +ERQ A S +N G+
Sbjct: 4 FRNYSNDTVSHNVLDE-NEERQNAATFQSSPLNEDVDGT 41
Score = 38 (18.4 bits), Expect = 6.7e-33, Sum P(3) = 6.7e-33
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 1068 EQPLTKEEGEMSDNEEVY 1085
E P + EE ++SD E+ Y
Sbjct: 281 EDPESDEEIDLSDYEDDY 298
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 1793 (636.2 bits), Expect = 8.4e-213, Sum P(3) = 8.4e-213
Identities = 405/880 (46%), Positives = 541/880 (61%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQN--LSGFKKVLNYAKKVVEDVRFRKMV 62
FD+E D E+++LIKWKG S++H W+S LQ + G KK+ N+ KK E ++ V
Sbjct: 296 FDTEKDEGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKV 355
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVT-------------QEYLV 109
S E++E + +E+ ++ KQ VER+IA + SK + G EYL
Sbjct: 356 SPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLC 415
Query: 110 KWKGLSYAEATWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQ 168
KW GL Y+E +WE + +I Q+ ID + +R + + + + K + L +Q
Sbjct: 416 KWMGLPYSECSWEDEALIGKKFQNCIDSFHSRNNSKTIPTR--ECKALKQRPRFVALKKQ 473
Query: 169 PEWLRGG--KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIP 226
P +L G +LRDYQLEGLN+L +SW + +VILADEMGLGKT+Q++S L +L + Q+
Sbjct: 474 PAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY 533
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNT 286
GPFL+VVPLSTL++W +EF W P +NV+VY+G SR ++YE+ + + + +KFN
Sbjct: 534 GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQT--KRLKFNA 591
Query: 287 LLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQN 346
L+TTYE++LKDK VL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTPLQN
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQN 651
Query: 347 SVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKS 406
S++ELW+LLHF+ +KF+ +DF +++ EN +LH L P +LRR+ KDVEKS
Sbjct: 652 SLKELWSLLHFIMPEKFEFWEDFEEDH---GKGRENGYQSLHKVLEPFLLRRVKKDVEKS 708
Query: 407 LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLF 466
LP K+E+ILRVEMS LQKQYYKWIL RN+ L KG RG+ LNIV+ELKKCCNH +L
Sbjct: 709 LPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLI 768
Query: 467 ESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILA 526
+ + + N L +I SSGKL++LDKLL RL E +RVLIFSQMVRMLDILA
Sbjct: 769 KPPEE----NERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILA 824
Query: 527 EYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVII 586
EY++ K + FQRLDGS K E+R QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+I
Sbjct: 825 EYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVI 884
Query: 587 FDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLN 646
FDSDWNPQNDLQA +RAHRIGQ++ VNIYR VT +VEE+I+ERAKKKMVLDHLVIQ+++
Sbjct: 885 FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMD 944
Query: 647 AEG------SWRRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXX 698
G + R N EL+AIL+FGAE+LFKE +E + MDID
Sbjct: 945 TTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQE---MDIDEILRL 1001
Query: 699 XXXXXXXXXXXXXXXXXXSAFKVANFCGAEDDGSFWSRWIKP-EAVAQAEDALAPRAARN 757
S FKVANF ED+ R K + + E
Sbjct: 1002 AETRENEVSTSATDELL-SQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEER 1060
Query: 758 TKSYAEANE-PE-RSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFID--------GAS 807
K E P RS+ +K + ++ E + +++ S D G
Sbjct: 1061 QKELEEIYMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETEDSDDDKKPKRRGRP 1120
Query: 808 AQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDA 846
VR + + RF +A KFG ++ IARDA
Sbjct: 1121 RSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDA 1160
Score = 221 (82.9 bits), Expect = 8.4e-213, Sum P(3) = 8.4e-213
Identities = 90/352 (25%), Positives = 153/352 (43%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQ 809
+ PR +TK A+ N+ + + K+ Q + + + P G
Sbjct: 1069 MLPRIRSSTKK-AQTNDSDSDTESKR-----QAQRSSASESETEDSDDDKKPKRRGRPRS 1122
Query: 810 VRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDA---GGAVATAPQ--EVVVELFD 863
VR + + RF +A KFG ++ IARDA +VA + E++
Sbjct: 1123 VRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCV 1182
Query: 864 ILIDGCREAVEVGSPDPKGP-----PLLDFFGVSVKANDLINRVEELQLLAKRISRYEDP 918
+ E ++ + + KGP P + GV V +I EE ++L K I +
Sbjct: 1183 SAMQEYEEQLKENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEE 1242
Query: 919 IKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVE 978
K++ + +K +++ W DD+RLLLGI+ HG+GNWE I+ D L LT KI PVE
Sbjct: 1243 KKKYCLTCRVKAAHFD--VEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVE 1300
Query: 979 LQHHETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXRKAS---KKGREKSENILNMP 1035
P+ L+ RA+ LL++ L +A +K R K EN
Sbjct: 1301 TDKK----PQGKQLQTRADYLLKL-LRKGLEKKGAVTGGEEAKLKKRKPRVKKEN----K 1351
Query: 1036 ISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQ 1087
+ RLK + + S + + +++ K +E+ K++ + +N+E E+
Sbjct: 1352 VPRLKEEHGIELSSPRHSDNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEK 1403
Score = 82 (33.9 bits), Expect = 8.4e-213, Sum P(3) = 8.4e-213
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMR-LWNYVSTFSNLSGEKLHQIYSKLK 1216
L RN L IG RI + + + ++ + ++ R LW +VS F+ KLH++Y
Sbjct: 1499 LEHTRNCLLKIGDRIAECLKAYSDQ--EHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAH 1556
Query: 1217 QERQEE 1222
++R +E
Sbjct: 1557 KKRSQE 1562
Score = 58 (25.5 bits), Expect = 7.7e-17, Sum P(3) = 7.7e-17
Identities = 31/117 (26%), Positives = 54/117 (46%)
Query: 78 LDIIKQNSQ-VERIIADRISKD-SSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAID 135
+D + NS+ +E+++ R+ K ++G T Y ++ G + EKDE Q I
Sbjct: 253 VDEQQDNSETIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEKDE--GEIQYLI- 309
Query: 136 EYKAREAAMA--EQGKMVDLQRKKGKASL----RKLDEQPEWLRGGKLRDYQLEGLN 186
++K + E + + Q+ KG L +K DE +WL GK+ +E N
Sbjct: 310 KWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWL--GKVSPEDVEYFN 364
Score = 52 (23.4 bits), Expect = 5.1e-188, Sum P(2) = 5.1e-188
Identities = 42/186 (22%), Positives = 78/186 (41%)
Query: 1018 RKASKKGREK---SENILNMPISRLK-RDKKGKPGSAKVNFQTTKDRFHKPQRV---EQP 1070
+K +K+ +EK S R K +DKK KP S + R P + +P
Sbjct: 1394 KKENKENKEKQMSSRKDKEGDKERKKSKDKKEKPKSGDAKSSSKSKRSQGPVHITAGSEP 1453
Query: 1071 LTKEEGEMSD-NEEVYEQFKE-VKWMEWCEDVMADEIRTLQRLQRLQATSDNLPK--EKV 1126
+ E E D ++E + KE ++ ++ + + L ++L+ T + L K +++
Sbjct: 1454 VPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLNVQEQLEHTRNCLLKIGDRI 1513
Query: 1127 ASVFPSFC--WHIPLYSRIKHLTSLLFFHFIQVLSKIRNYLQLIGRRIDQIVLEHEEELY 1184
A ++ HI L+ R + F F K+ ++ ++ Q EEE
Sbjct: 1514 AECLKAYSDQEHIKLWRRNLWIFVSKFTEFDA--RKLHKLYKMAHKKRSQ----EEEEQK 1567
Query: 1185 KQDRMT 1190
K+D +T
Sbjct: 1568 KKDDVT 1573
Score = 44 (20.5 bits), Expect = 3.6e-187, Sum P(2) = 3.6e-187
Identities = 18/85 (21%), Positives = 35/85 (41%)
Query: 1214 KLKQERQEEAGIGPSHI-NGSASGSIDND-LNFSTFNRHAERQKGHKNVSTYQMTEPIHK 1271
+LK+E E P H N S G + +D L S + ++++ +N + +
Sbjct: 1354 RLKEEHGIELS-SPRHSDNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEKQMSSRKDKE 1412
Query: 1272 GIDPKKFEAWKRRRRAETDMYSQAQ 1296
G +K K+ + D S ++
Sbjct: 1413 GDKERKKSKDKKEKPKSGDAKSSSK 1437
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 1762 (625.3 bits), Expect = 2.9e-208, Sum P(3) = 2.9e-208
Identities = 385/788 (48%), Positives = 491/788 (62%)
Query: 11 WNEMEFLIKWKGQSHL---------HCQWKSFAELQNLSGFKKVLNYAKKVVEDVRF--R 59
W+ E L +KG L + QW+ A +++ K+ ++D R
Sbjct: 576 WDAYESLNNFKGNKKLQNYVKGILDNIQWRQEASKEDIEQADITKELMKQEIQDYTIVER 635
Query: 60 KMVSREEIELND--VSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYA 117
+ RE + D V+ +D S S + N+ +YLVKWK L+Y+
Sbjct: 636 VIAQREVAQSRDQIVNSTTAIDPSTGESTTTTTTTTASSSEYKSNI--QYLVKWKVLAYS 693
Query: 118 EATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDL--QRKKGKASLRKLDEQPEWLRGG 175
E TWE E I Q ID + R+ + +K+ KLD QP W+ G
Sbjct: 694 EVTWEYPEDIAEFQTEIDTFLIRQQNNQNAPMKANTISAKKRLDQGFTKLDTQPSWISAG 753
Query: 176 KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPL 235
LRDYQ+EGLN+LV+SW N+TNVILADEMGLGKT+Q++S L +L N Q I GPFLVVVPL
Sbjct: 754 TLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLFNEQDIKGPFLVVVPL 813
Query: 236 STLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRP-IKFNTLLTTYEVV 294
ST+ NW +EF KW P MNVIVY GT SR++ + YEFY ++G+ + FN LLTTY+ +
Sbjct: 814 STIENWQREFAKWAPAMNVIVYTGTGQSRDIIRLYEFYTTNRLGKKKLNFNVLLTTYDFI 873
Query: 295 LKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWAL 354
LKDK L IKW +L VDEAHRLKNSE+ L+ L ++T N+LL+TGTPLQNS++ELW L
Sbjct: 874 LKDKNTLGTIKWEFLAVDEAHRLKNSESVLHEVLKLYNTTNRLLVTGTPLQNSLKELWNL 933
Query: 355 LHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
L+FL +KF S DF Y +L +++A LH L+PH+LRRI KDVEKSLPPK ERI
Sbjct: 934 LNFLMPNKFTSLKDFQDQYSDLKE--NDQIAQLHSVLKPHLLRRIKKDVEKSLPPKTERI 991
Query: 415 LRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYG 474
LRV++S +QK+YYKWIL +NF +LNKG +G + +LLNI+ ELKK CNHP+L+++A
Sbjct: 992 LRVDLSNVQKKYYKWILTKNFQELNKG-KGEKTTLLNIMTELKKTCNHPYLYQNARD--- 1047
Query: 475 GDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGF 534
+ + L+ +I +SGKLV+LDKLL+RL ET HRVLIFSQMVRMLDILA+Y+ + F
Sbjct: 1048 -ECELGAKDLLDSMIRASGKLVLLDKLLIRLKETGHRVLIFSQMVRMLDILADYLKGRSF 1106
Query: 535 QFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQ 594
QFQRLDGS E R QAMD FNA S DFCFLLST+AGGLGINL+TADTVIIFDSDWNPQ
Sbjct: 1107 QFQRLDGSMSREKRSQAMDRFNAVDSPDFCFLLSTKAGGLGINLSTADTVIIFDSDWNPQ 1166
Query: 595 NDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRK 654
NDLQA +RAHRIGQ+ VNIYR V+ SVEEDILERAK+KMVLDHLVIQ + + +
Sbjct: 1167 NDLQAEARAHRIGQKNHVNIYRLVSKSSVEEDILERAKQKMVLDHLVIQTMEKSQTAKSN 1226
Query: 655 KQRKGN-----ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXX 709
N EL AIL+FGAEELFKE EE+ + MDID
Sbjct: 1227 TPNNSNVFNKEELEAILKFGAEELFKE--TGEEANP-IEEMDIDEILSRAETREASDSTT 1283
Query: 710 XXXXXXXSAFKVANFCGA---EDDGSFWSRWI----KPEAVAQAEDALAPRAARNTKSYA 762
S F+VANF E + W I + +AV + +D L R +
Sbjct: 1284 AGEELLNS-FRVANFSTTSKEEQQNATWEDIIPDADRQKAVQEEKDQLLLLGPRRRTETS 1342
Query: 763 EANEPERS 770
+ P R+
Sbjct: 1343 SSTAPTRN 1350
Score = 196 (74.1 bits), Expect = 2.9e-208, Sum P(3) = 2.9e-208
Identities = 64/247 (25%), Positives = 111/247 (44%)
Query: 819 SKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSP 878
+K++ R++ KFG + I DA P E+ +ID +AV
Sbjct: 1370 NKKEIKILIRSLKKFGTHKRCREILADAD--FQNKPLRPTEEICKEIIDAAEKAVRDNQD 1427
Query: 879 DPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCG 938
K L + G + A + + R++++++LA+ + +QFRV ++P +W+
Sbjct: 1428 SDKIH--LVYNGTDINATEFVQRIQDMEVLAELCQPWIKDYQQFRVTFPIRPVSWT--IK 1483
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPR----APNLKE 994
W +DA LL+GI+ HG NWE+I+ D LG I E+ + L P+ K
Sbjct: 1484 WGPKEDAMLLMGIYKHGVSNWESIQKDTSLGFGDII---EIDNTAPLLDANGVPIPSNKL 1540
Query: 995 RANALLE-MELXXXXXXXXXXXXXRKASKKGREKSENILNMPISRLKRDKKGKPGSAKV- 1052
+ AL ++ +K+SK+ +EK E +P R ++ K+ K S
Sbjct: 1541 KGAALQRRVDSLLKSAKDISKTTNKKSSKQTKEKEEGEFKIPKKRGRKSKEIKEVSNNNH 1600
Query: 1053 NFQTTKD 1059
N + TK+
Sbjct: 1601 NNKETKE 1607
Score = 187 (70.9 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 35/92 (38%), Positives = 63/92 (68%)
Query: 6 DSEPD-WN--EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMV 62
++EP+ +N + EFL+KWKG +++H W ++ L N G KK+ NY K +++++++R+
Sbjct: 549 ENEPEIFNVEDYEFLVKWKGWAYIHNTWDAYESLNNFKGNKKLQNYVKGILDNIQWRQEA 608
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADR 94
S+E+IE D++KE+ I+ + VER+IA R
Sbjct: 609 SKEDIEQADITKELMKQEIQDYTIVERVIAQR 640
Score = 95 (38.5 bits), Expect = 2.9e-208, Sum P(3) = 2.9e-208
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLKQ 1217
+SK + YL +G+ I I+L+ ++ +D + LW S ++ G++L +Y K+K+
Sbjct: 1816 VSKTKKYLLSLGKEIS-IILDEKKSANIKD-LDSHLWYSASKYTASGGKELKSLYDKMKK 1873
Query: 1218 ERQEEAGIGPSHINGSASGSIDNDLNFSTFNRHA 1251
S + S++ S N+ N S+ ++ A
Sbjct: 1874 SSSSNNDSSSSSSSRSSNSSSSNNSNSSSSSKPA 1907
Score = 84 (34.6 bits), Expect = 1.5e-17, Sum P(4) = 1.5e-17
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 87 VERIIADRISKDSSGNVTQ-------EYLVKWKGLSYAEATWEKDEIID----------F 129
+E+I+ R+ KD S N + E+LVKWKG +Y TW+ E ++ +
Sbjct: 535 IEKILDHRLKKDCSENEPEIFNVEDYEFLVKWKGWAYIHNTWDAYESLNNFKGNKKLQNY 594
Query: 130 AQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLR 163
+ +D + R+ A E + D+ ++ K ++
Sbjct: 595 VKGILDNIQWRQEASKEDIEQADITKELMKQEIQ 628
Score = 54 (24.1 bits), Expect = 2.8e-193, Sum P(3) = 2.8e-193
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 757 NTKSYAEANEPERSNK--RKKKGSELQEPQERVHKRRKAEFSVPSVP 801
N + Y E E + K R KK + +E Q+ + +K F SVP
Sbjct: 1649 NDEDYMEEEEKKEKTKNTRTKKRIKSEELQKEILSPKKTSFGRLSVP 1695
Score = 43 (20.2 bits), Expect = 5.1e-28, Sum P(4) = 5.1e-28
Identities = 16/72 (22%), Positives = 31/72 (43%)
Query: 719 FKVAN-FCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKG 777
F + N F +D +S + + +AQ L P R K E + P ++ + +
Sbjct: 936 FLMPNKFTSLKDFQDQYSDLKENDQIAQLHSVLKPHLLRRIKKDVEKSLPPKTERILRV- 994
Query: 778 SELQEPQERVHK 789
+L Q++ +K
Sbjct: 995 -DLSNVQKKYYK 1005
Score = 42 (19.8 bits), Expect = 1.7e-13, Sum P(4) = 1.7e-13
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 624 EEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEES 683
E IL R+ KK H +++ A+ ++ K R E+ + AE+ +++++ ++
Sbjct: 1373 EIKILIRSLKKFGT-HKRCREILADADFQNKPLRPTEEICKEIIDAAEKAVRDNQDSDKI 1431
Query: 684 KKRLLGMDID 693
G DI+
Sbjct: 1432 HLVYNGTDIN 1441
Score = 42 (19.8 bits), Expect = 2.4e-13, Sum P(4) = 2.4e-13
Identities = 18/109 (16%), Positives = 44/109 (40%)
Query: 47 NYAKKVVEDVRFRKMVSREEI-ELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQ 105
N KK + + + + S E E + +E + N Q +++ +++ +S +
Sbjct: 208 NGLKKDISNFKGNESSSSESSSESSSSEEESESQEDTPNKQRNKVLTQQLASESEEELQP 267
Query: 106 EYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQ 154
K + ++ +E +E ++ Q D E + +E+ D +
Sbjct: 268 VNKKKSTMVKKVDSDFESEEDVEEEQSGKDNDSDYEPSESEEQSEEDYE 316
Score = 37 (18.1 bits), Expect = 1.7e-191, Sum P(3) = 1.7e-191
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 1049 SAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
SAK +TT + K Q KEEGE ++ + KE+K
Sbjct: 1555 SAKDISKTTNKKSSK-----QTKEKEEGEFKIPKKRGRKSKEIK 1593
Score = 37 (18.1 bits), Expect = 9.7e-13, Sum P(4) = 9.7e-13
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 768 ERSNKRKKKGSELQE 782
+++N RK+KG+ Q+
Sbjct: 379 KQTNGRKRKGNNFQK 393
Score = 37 (18.1 bits), Expect = 9.7e-13, Sum P(4) = 9.7e-13
Identities = 5/32 (15%), Positives = 20/32 (62%)
Query: 754 AARNTKSYAEANEPERSNKRKKKGSELQEPQE 785
++ + + Y++ ++ + +KR K+ ++ + +E
Sbjct: 432 SSSSDEDYSDNDKKNKKSKRTKRKNKTESDEE 463
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 1782 (632.4 bits), Expect = 3.7e-206, Sum P(3) = 3.7e-206
Identities = 377/751 (50%), Positives = 498/751 (66%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQN--LSGFKKVLNYAKKVVEDVRFRKMV 62
FD E D E+ +LIKWKG S++H W+S LQ + G KK+ N+ KK E ++ V
Sbjct: 299 FDPEKDEGEVHYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLAKV 358
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVT------------QEYLVK 110
S E++E + +E+ ++ KQ VER+IA + SK ++G+ EYL K
Sbjct: 359 SPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSAAGHADFPANSRKTSSNDPEYLCK 418
Query: 111 WKGLSYAEATWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
W GL YAE +WE + +I Q ID + R + + D + K + L +QP
Sbjct: 419 WMGLPYAECSWEDEALISKKFQHCIDSFNNRNNSKTIPTR--DCKVLKQRPRFVALKKQP 476
Query: 170 EWLRGG--KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPG 227
++ +LRDYQLEGLN+L +SW + +VILADEMGLGKT+Q++S L +L + Q+ G
Sbjct: 477 SYIGSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYG 536
Query: 228 PFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTL 287
PFLVVVPLSTL++W +EF W P +NV+VY+G SR + ++YE+ + + + +KFN L
Sbjct: 537 PFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQS--KRLKFNAL 594
Query: 288 LTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNS 347
+TTYE++LKDKAVL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS
Sbjct: 595 ITTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNS 654
Query: 348 VEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSL 407
++ELW+LLHF+ +KF+ +DF +++ EN +LH L P +LRR+ KDVEKSL
Sbjct: 655 LKELWSLLHFIMPEKFEFWEDFEEDH---GKGRENGYQSLHKVLEPFLLRRVKKDVEKSL 711
Query: 408 PPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
P K+E+ILRVEMS LQKQYYKWIL RN+ L+KG RG+ LNIV+ELKKCCNH +L +
Sbjct: 712 PAKVEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIK 771
Query: 468 SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAE 527
+ + N L+ +I SSGKL++LDKLL RL + +RVLIFSQMVRMLDILAE
Sbjct: 772 PPEE----NERENGIETLQSLIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAE 827
Query: 528 YMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIF 587
Y++ K + FQRLDGS K E+R QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IF
Sbjct: 828 YLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 887
Query: 588 DSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA 647
DSDWNPQNDLQA +RAHRIGQ++ VNIYR VT +VEE+I+ERAKKKMVLDHLVIQ+++
Sbjct: 888 DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 947
Query: 648 EG------SWRRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXX 699
G + R N EL+AIL+FGAE+LFKE +E + MDID
Sbjct: 948 TGRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQE---MDIDEILRLA 1004
Query: 700 XXXXXXXXXXXXXXXXXSAFKVANFCGAEDD 730
KVANF E++
Sbjct: 1005 ETRENEVSTSATDELLSQFKKVANFATMEEE 1035
Score = 209 (78.6 bits), Expect = 3.7e-206, Sum P(3) = 3.7e-206
Identities = 77/269 (28%), Positives = 122/269 (45%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKK-----GSELQEPQERVHKRRKAEFSVPSVPFID 804
+ PR +TK A+ N+ E + K++ GSE + KR K
Sbjct: 1073 MLPRIRSSTKK-AQTNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRR---------- 1121
Query: 805 GASAQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDAGGA-VATAPQEVVVELF 862
G VR + + + RF +A KFG ++ IARDA + A + + EL
Sbjct: 1122 GRPRSVRKDTVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELI 1181
Query: 863 -DILIDGCREAVEVGSPDP---KGP-----PLLDFFGVSVKANDLINRVEELQLLAKRIS 913
+ + +E E +P KGP P + GV V +I EE ++L K I
Sbjct: 1182 HNSCVSAMQEYEEQLKENPGERKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIP 1241
Query: 914 RYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKK 973
+ K++R+ +K +++ W +D+RLL+GI+ HG+GNWE I+ D L L+ K
Sbjct: 1242 ADPEERKKYRLTCRVKAAHFD--VDWGVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDK 1299
Query: 974 IAPVELQHHETFLPRAPNLKERANALLEM 1002
I PVE P+ L+ R + LL++
Sbjct: 1300 ILPVETDKK----PQGKQLQTRVDYLLKL 1324
Score = 106 (42.4 bits), Expect = 1.5e-192, Sum P(2) = 1.5e-192
Identities = 77/367 (20%), Positives = 144/367 (39%)
Query: 878 PDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGC 937
P + P + GV V +I EE ++L K I + K++R+ +K +++
Sbjct: 1206 PGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPADPEERKKYRLTCRVKAAHFDVDW 1265
Query: 938 GWNQFDDARLLLGIHYHG----FGNWENIRLDERL---GLTKKIAPVELQHHETFLPRAP 990
G + + + H +G ++L +++ KK +LQ +L +
Sbjct: 1266 GVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQTRVDYLLKL- 1324
Query: 991 NLKERANALLEMELXXXXXXXXXXXXXRKASKKGREKSENILNMPISRLKRDKKGKPGSA 1050
LK+ M+ +K +K + K E+ + R D + + G
Sbjct: 1325 -LKKDLEKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELSPPR-HSDNQSEEGEV 1382
Query: 1051 KVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQR 1110
K + K K Q+ ++ +E + S +E ++ K E E E ++ +
Sbjct: 1383 KDD-GLDKSPVKKKQKKKENKENKEKQTSSKKEKESDKEKKKTKEKKEKPKGGEAKSGSK 1441
Query: 1111 LQRLQ------ATSDNLP-----KEKVASVFPSFCWHI--PLYSRIKHLTSLLFFHFIQV 1157
+R Q A S+ +P + + S C P+ +K L +Q
Sbjct: 1442 GKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLTVQE 1501
Query: 1158 -LSKIRNYLQLIGRRIDQIVLEH-EEELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKL 1215
L RN L IG RI + + + +++L K R LW +VS F+ KLH++Y
Sbjct: 1502 QLEHTRNCLLKIGDRISECLKAYTDQDLIKLWRRN--LWIFVSKFTEFDARKLHKLYKMA 1559
Query: 1216 KQERQEE 1222
++R +E
Sbjct: 1560 HKKRSQE 1566
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 82 KQNSQ-VERIIADRISKD-SSGNVTQEYLVKWKGLSYAEATWEKDE 125
+ NS+ +E+++ R+ K ++G T Y + G A+ EKDE
Sbjct: 260 EDNSETIEKVLDIRLGKKGATGASTTVYATEANGNPSADFDPEKDE 305
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 18/84 (21%), Positives = 38/84 (45%)
Query: 343 PLQNSVEELWALLHFLDHDKFKSK-DDFIQNYKNLSSFNENELANLHMELRPHILRRIIK 401
P + ++E+ L +++ S D+ + +K +++F E ++ RP K
Sbjct: 992 PQEMDIDEILRLAETRENEVSTSATDELLSQFKKVANFATMEEEETELDERPQ------K 1045
Query: 402 DVEKSLPPKIERILRVEMSPLQKQ 425
D + +P E+ +VE QK+
Sbjct: 1046 DWDDIIPE--EQRKKVEEEERQKE 1067
Score = 45 (20.9 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 6 DSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSRE 65
+SEP +++ +++ + EL LS FKKV N+A +E+ E
Sbjct: 989 ESEPQEMDIDEILRLAETRENEVSTSATDEL--LSQFKKVANFA--TMEE---------E 1035
Query: 66 EIELND-VSKEMDLDII--KQNSQVE 88
E EL++ K+ D DII +Q +VE
Sbjct: 1036 ETELDERPQKDWD-DIIPEEQRKKVE 1060
Score = 42 (19.8 bits), Expect = 3.7e-206, Sum P(3) = 3.7e-206
Identities = 18/75 (24%), Positives = 34/75 (45%)
Query: 1214 KLKQERQEEAGIGPSHI-NGSASGSIDND-LNFSTFNRHAERQKGHKNVSTYQMTEPIHK 1271
K+K E E P H N S G + +D L+ S + +++K +K Q + K
Sbjct: 1358 KVKDEHGNELS-PPRHSDNQSEEGEVKDDGLDKSPVKKK-QKKKENKENKEKQTSSKKEK 1415
Query: 1272 GIDPKKFEAWKRRRR 1286
D +K + +++ +
Sbjct: 1416 ESDKEKKKTKEKKEK 1430
Score = 39 (18.8 bits), Expect = 1.8e-185, Sum P(2) = 1.8e-185
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 757 NTKSYAEANEPERSNKRKKKGSELQE 782
N + + + + S+K KKK E +E
Sbjct: 1404 NKEKQTSSKKEKESDKEKKKTKEKKE 1429
Score = 39 (18.8 bits), Expect = 1.8e-185, Sum P(2) = 1.8e-185
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 767 PERSNKRKKKGSELQEPQERVHKRRKAE 794
P + ++KK+ E +E Q K ++++
Sbjct: 1391 PVKKKQKKKENKENKEKQTSSKKEKESD 1418
Score = 38 (18.4 bits), Expect = 2.3e-185, Sum P(2) = 2.3e-185
Identities = 7/36 (19%), Positives = 18/36 (50%)
Query: 763 EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVP 798
+ + + NK K+ S+ ++ ++ K+ K + P
Sbjct: 1396 QKKKENKENKEKQTSSKKEKESDKEKKKTKEKKEKP 1431
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 1790 (635.2 bits), Expect = 1.4e-205, Sum P(2) = 1.4e-205
Identities = 406/883 (45%), Positives = 540/883 (61%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQN--LSGFKKVLNYAKKVVEDVRFRKMV 62
FD+E + E+++LIKWKG S++H W+S LQ + G KK+ N+ KK E ++ V
Sbjct: 303 FDTEREEGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKV 362
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVT-------------QEYLV 109
S E++E + +E+ ++ KQ VER+IA + SK + G EYL
Sbjct: 363 SPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSALGQTDFPAHSRKPAPSNEPEYLC 422
Query: 110 KWKGLSYAEATWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQ 168
KW GL Y+E +WE + +I Q ID + +R + + + + K + L +Q
Sbjct: 423 KWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTR--ECKALKQRPRFVALKKQ 480
Query: 169 PEWLRGG--KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIP 226
P +L G +LRDYQLEGLN+L +SW +VILADEMGLGKT+Q++S L +L + Q+
Sbjct: 481 PAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY 540
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNT 286
GPFL+VVPLSTL++W +EF W P +NV+VY+G SR ++YE+ + + + +KFN
Sbjct: 541 GPFLIVVPLSTLTSWQREFEIWAPEVNVVVYIGDLMSRNTIREYEWIHSQT--KRLKFNA 598
Query: 287 LLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQN 346
L+TTYE++LKDK VL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTPLQN
Sbjct: 599 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQN 658
Query: 347 SVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKS 406
S++ELW+LLHF+ +KF+ +DF +++ EN +LH L P +LRR+ KDVEKS
Sbjct: 659 SLKELWSLLHFIMPEKFEFWEDFEEDH---GKGRENGYQSLHKVLEPFLLRRVKKDVEKS 715
Query: 407 LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLF 466
LP K+E+ILRVEMS LQKQYYKWIL RN+ L KG RG+ LNIV+ELKKCCNH +L
Sbjct: 716 LPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLI 775
Query: 467 ESADHGYGGDTSINDTSK--LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDI 524
+ + S +T + L+ +I SSGKL++LDKLL RL E +RVLIFSQMVRMLDI
Sbjct: 776 RAPED------SERETGQEVLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDI 829
Query: 525 LAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTV 584
LAEY++ K + FQRLDGS K E+R QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV
Sbjct: 830 LAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTV 889
Query: 585 IIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK 644
+IFDSDWNPQNDLQA +RAHRIGQ++ VNIYR VT +VEE+I+ERAKKKMVLDHLVIQ+
Sbjct: 890 VIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQR 949
Query: 645 LNAEG------SWRRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXX 696
++ G + R N EL+AIL+FGAE+LFKE +E + MDID
Sbjct: 950 MDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEIEGEESEPQE---MDIDEIL 1006
Query: 697 XXXXXXXXXXXXXXXXXXXXSAFKVANFCGAEDDGSFWSRWIKP-EAVAQAEDALAPRAA 755
S FKVANF ED+ R K + + E
Sbjct: 1007 RLAETRENEVSTSATDELL-SQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEE 1065
Query: 756 RNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFID----------- 804
K E R KK ++ + +R+A+ S S D
Sbjct: 1066 ERQKELEEIYMLPRIRSSTKK-AQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRR 1124
Query: 805 GASAQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDA 846
G VR + + RF +A KFG ++ IARDA
Sbjct: 1125 GRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDA 1167
Score = 221 (82.9 bits), Expect = 1.4e-205, Sum P(2) = 1.4e-205
Identities = 94/353 (26%), Positives = 155/353 (43%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQ 809
+ PR +TK A+ N+ + + K+ Q + + + P G
Sbjct: 1076 MLPRIRSSTKK-AQTNDSDSDTESKR-----QAQRSSASESETDDSDDDKKPKRRGRPRS 1129
Query: 810 VRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDA---GGAVATAPQ--EVVVELFD 863
VR + + RF +A KFG ++ IARDA +VA + E+V
Sbjct: 1130 VRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELVHNSCV 1189
Query: 864 ILIDGCREAVEVGSPDPKGP-----PLLDFFGVSVKANDLINRVEELQLLAKRISRYEDP 918
+ E ++ + + KGP P + GV V +I EE ++L K I +
Sbjct: 1190 SAMQEYEEQLKENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEE 1249
Query: 919 IKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVE 978
K++ + +K +++ W DD+RLLLGI+ HG+GNWE I+ D L LT KI PVE
Sbjct: 1250 KKKYCLTCRVKAAHFD--VEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVE 1307
Query: 979 LQHHETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXRKAS---KKGREKSENILNMP 1035
P+ L+ R + LL++ L +A +K R K EN P
Sbjct: 1308 TDKK----PQGKQLQTRVDYLLKL-LRKGLEKKGTVTSGEEAKLKKRKPRVKKEN--KAP 1360
Query: 1036 ISRLKRDKKG-KPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQ 1087
RLK D+ G + S + + +++ K +E+ TK++ + +N+E E+
Sbjct: 1361 --RLK-DEHGLELSSPRHSDNPSEEGEVKDDGLEKSPTKKKQKKKENKENKEK 1410
Score = 82 (33.9 bits), Expect = 7.2e-191, Sum P(2) = 7.2e-191
Identities = 48/220 (21%), Positives = 93/220 (42%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAK---VNFQTTKDRFHKPQRVE---QPL 1071
+K +K R K E+ L + R D + G K + TK + K + E +P+
Sbjct: 1354 KKENKAPRLKDEHGLELSSPR-HSDNPSEEGEVKDDGLEKSPTKKKQKKKENKENKEKPV 1412
Query: 1072 TKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLP-----KEKV 1126
+ + D E+ + K+ K ++ + + + + Q + A S+ +P + +
Sbjct: 1413 SSRKDREGDKEKKKSKDKKEK-VKGGDAKSSSKSKRSQGPVHITAGSEPVPIGEDEDDDL 1471
Query: 1127 ASVFPSFCWHI--PLYSRIKHLTSL-LFFHFIQVLSKIRNYLQLIGRRIDQIVLEHEEEL 1183
S C P+ +K L + + L R+ L IG RI + + + E+
Sbjct: 1472 DQETFSICKERMRPVKKALKQLDKPDKGLNVQEQLEHTRSCLLKIGDRIAECLRAYSEQ- 1530
Query: 1184 YKQDRMTMR-LWNYVSTFSNLSGEKLHQIYSKLKQERQEE 1222
+ ++ R LW +VS F+ KLH++Y ++R +E
Sbjct: 1531 -EHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQE 1569
Score = 43 (20.2 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 364 KSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIER 413
K K D ++ + S E+E ++ R I RR + + PKI+R
Sbjct: 150 KWKQDPSEDDQEQGSSAESEAEQKKVKARRPIPRRTVPKPQVKKQPKIQR 199
>FB|FBgn0250786 [details] [associations]
symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
exchange of chromosomal proteins" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
GO:GO:0035042 Uniprot:Q7KU24
Length = 1883
Score = 1765 (626.4 bits), Expect = 1.0e-204, Sum P(4) = 1.0e-204
Identities = 375/745 (50%), Positives = 497/745 (66%)
Query: 5 FDSE--PDWN-EMEFLIKWKGQSHLHCQWKSFAELQNLS--GFKKVLNYAKKVVEDVRFR 59
FD + PD E +FLIKWKG S++H W+S A L+++ G KK+ N+ KK E +R
Sbjct: 354 FDEKQTPDAETEAQFLIKWKGWSYIHNTWESEATLRDMKAKGMKKLDNFIKKEKEQAYWR 413
Query: 60 KMVSREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEA 119
+ E+I+ + E+ +++K + V+RIIA + SK G T+EYL KW+ L YAE+
Sbjct: 414 RYAGPEDIDYFECQLELQHELLKSYNNVDRIIA-KGSKPDDG--TEEYLCKWQSLPYAES 470
Query: 120 TWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGG-KL 177
TWE ++ Q +++ RE++ + + + + K S ++ QPE+L G L
Sbjct: 471 TWEDAALVLRKWQRCAEQFNDRESSKCTPSRHCRVIKYRPKFS--RIKNQPEFLSSGLTL 528
Query: 178 RDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLST 237
RDYQ++GLN+L++SW + +VILADEMGLGKT+Q++ L L + GPFL VVPLST
Sbjct: 529 RDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLST 588
Query: 238 LSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKD 297
++ W +EF W P MNV+ Y+G SRE+ QQYE+ + + +KFN +LTTYE+VLKD
Sbjct: 589 MTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESS--KRLKFNCILTTYEIVLKD 646
Query: 298 KAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHF 357
K L ++W L+VDEAHRLKN ++ LY +L EF T ++LLITGTPLQNS++ELWALLHF
Sbjct: 647 KQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHF 706
Query: 358 LDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRV 417
+ DKF + ++F + N + LH +L P+ILRR+ KDVEKSLP K+E+ILRV
Sbjct: 707 IMPDKFDTWENFEVQHGNAE---DKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRV 763
Query: 418 EMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDT 477
EM+ LQKQYYKWIL +NF L KG RG+ + LNIV+ELKKCCNH L ++ G
Sbjct: 764 EMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMG-- 821
Query: 478 SINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQ 537
+ L+ ++ SGKLV+LDKLL RL ET HRVLIFSQMVRMLD+LA+Y+ + F FQ
Sbjct: 822 -LQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQ 880
Query: 538 RLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 597
RLDGS K E+R QA+DHFNA GS+DFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL
Sbjct: 881 RLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 940
Query: 598 QAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQR 657
QA +RAHRIGQ+ VNIYR VT++SVEE I+ERAK+KMVLDHLVIQ+++ G K
Sbjct: 941 QAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSG 1000
Query: 658 KGN----------ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXX 707
G+ +LSAIL+FGAEELFK+++ ++ L DID
Sbjct: 1001 NGHSSNSNPFNKDDLSAILKFGAEELFKDEQEHDDD----LVCDIDEILRRAETRNEDPE 1056
Query: 708 XXXXXXXXXSAFKVANFCGAEDDGS 732
SAFKVA+ E++ S
Sbjct: 1057 MPADDLL--SAFKVASIAAFEEEPS 1079
Score = 114 (45.2 bits), Expect = 1.0e-204, Sum P(4) = 1.0e-204
Identities = 36/113 (31%), Positives = 57/113 (50%)
Query: 890 GVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLL 949
GVS A L+ +ELQ L + + + +Q+ +K W +D +LL
Sbjct: 1277 GVSFNAKKLLACEQELQPLNEIMPSMPEERQQWSF--NIKTRAPVFDVDWGIEEDTKLLC 1334
Query: 950 GIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANALLEM 1002
GI+ +G G+WE ++LD L LT KI ++T P+A L+ RA LL++
Sbjct: 1335 GIYQYGIGSWEQMKLDPTLKLTDKILL-----NDTRKPQAKQLQTRAEYLLKI 1382
Score = 83 (34.3 bits), Expect = 1.0e-204, Sum P(4) = 1.0e-204
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLKQ 1217
L R+ L IG++ID + + E K+ R LW +VS F+ L ++L +IY K
Sbjct: 1540 LQHTRDCLLQIGKQIDVCLNPYAETEKKEWRSN--LWYFVSKFTELDAKRLFKIY---KH 1594
Query: 1218 ERQEEAGIGPSHINGSASGS 1237
+++AG G G GS
Sbjct: 1595 ALKQKAG-GDGEAKGKDKGS 1613
Score = 70 (29.7 bits), Expect = 1.0e-204, Sum P(4) = 1.0e-204
Identities = 35/132 (26%), Positives = 53/132 (40%)
Query: 660 NELSAILRFGAEELFKEDR--NDE------ESKKRLLGMDIDXXXXXXXXXXXXXXXXXX 711
++LSAIL+FGAEELFK+++ +D+ E +R + D
Sbjct: 1013 DDLSAILKFGAEELFKDEQEHDDDLVCDIDEILRRAETRNEDPEMPADDLLSAFKVASIA 1072
Query: 712 XXXXXSAFKVA----NFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEP 767
+ V+ N G EDD W I PE +A D RA Y
Sbjct: 1073 AFEEEPSDSVSKQDQNAAGEEDDSKDWDDII-PEGFRKAIDD-QERAKEMEDLYLPPRRK 1130
Query: 768 ERSNKRK-KKGS 778
+N+ + K+G+
Sbjct: 1131 TAANQNEGKRGA 1142
Score = 65 (27.9 bits), Expect = 7.9e-203, Sum P(4) = 7.9e-203
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 1215 LKQERQEEAGIGPSHINGSASGSI-DN--DLNFSTFN--RHAERQKGHKNVSTYQMTEP 1268
LK++R E S + G+ G I DN ++F N RH +R+K H+ Y + P
Sbjct: 1672 LKRKRDENDADASSGLAGAPGGGIGDNLKSMSFKRLNMDRHEDRKKHHRGPDYYGGSGP 1730
Score = 55 (24.4 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 728 EDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERV 787
E+D + +P + A A+++ A + S + ++E E + R K+ + ++P
Sbjct: 136 EEDNETEAGQQQPASDASADESSDSSANVSPTSSSSSSEEEEEDYRPKRTRQARKPPTAA 195
Query: 788 HKRRKA 793
K +KA
Sbjct: 196 EKSKKA 201
Score = 51 (23.0 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 120 TWEKDEIIDFAQDAIDEY----KAREAAMAEQGKMVDLQRKK 157
TW+ DE D ++D+ DE K + AA + K+ Q+++
Sbjct: 210 TWDSDES-DESEDSDDEVSTAQKRKPAATTSRSKLAQQQQRR 250
Score = 48 (22.0 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 720 KVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSE 779
K+ NF E + ++W R+ PE + E L + KSY + + G+E
Sbjct: 398 KLDNFIKKEKEQAYWRRYAGPEDIDYFECQLELQHEL-LKSYNNVDRIIAKGSKPDDGTE 456
Score = 44 (20.5 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 27/106 (25%), Positives = 47/106 (44%)
Query: 740 PEAVAQAEDALAPRAARNTKSYAEANEPERSN-------KRKKKGSELQEPQERVHKRRK 792
P A +++ A AP+ + T E++E E S+ KRK + + + +RR+
Sbjct: 192 PTAAEKSKKAPAPKNKKKTWDSDESDESEDSDDEVSTAQKRKPAATTSRSKLAQQQQRRR 251
Query: 793 AEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQ 838
+ PF S++ D + SKR ATR A + + S+
Sbjct: 252 VK------PF----SSE--DSDDDDASKRCATRRKGAAVSYKEASE 285
Score = 40 (19.1 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 736 RWIKPEAVAQAEDALAP-RAARNTK----SYAEANEPERSNKRKKKGSELQEPQ 784
R +KP + ++D A R A K SY EA+E E ++ E E Q
Sbjct: 250 RRVKPFSSEDSDDDDASKRCATRRKGAAVSYKEASEDEATDSEDLLEFEYDESQ 303
Score = 39 (18.8 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQE 785
R AR + AE ++ + K KKK + E E
Sbjct: 186 RQARKPPTAAEKSKKAPAPKNKKKTWDSDESDE 218
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 1823 (646.8 bits), Expect = 2.6e-195, Sum P(2) = 2.6e-195
Identities = 410/900 (45%), Positives = 557/900 (61%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + E+++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 303 FEKSKELGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNA 362
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ D+ KQ VERIIA K ++G +Y KW+GL Y+E +WE
Sbjct: 363 SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGY--PDYYCKWQGLPYSECSWE 420
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK---LR 178
+I Q IDEY +R + K D + K + L +QP ++ G + LR
Sbjct: 421 DGALIAKKFQARIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQPSYIGGHESLELR 478
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
DYQL GLN+L +SW + ILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 479 DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL 538
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +E + W P MN +VY+G SR + + +E+ + + + +KFN LLTTYE++LKDK
Sbjct: 539 TSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQT--KRLKFNILLTTYEILLKDK 596
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
+ L + W ++ VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+
Sbjct: 597 SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 656
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF S +DF + + E A+LH EL P +LRR+ KDVEKSLP K+E+ILR+E
Sbjct: 657 MPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 713
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L + D +
Sbjct: 714 MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDD----NEF 769
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQR
Sbjct: 770 YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQR 829
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 830 LDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 889
Query: 599 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSW------R 652
A +RAHRIGQ++ VNIYR VT SVEEDILERAKKKMVLDHLVIQ+++ G
Sbjct: 890 AQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGST 949
Query: 653 RKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
N ELSAIL+FGAEELFKE +E+ + MDID
Sbjct: 950 PSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETRENEPGPLT 1006
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNT----KSYAEANE 766
S FKVANF ++D ++PE ++ + + P + R + E E
Sbjct: 1007 VGDELLSQFKVANFSNMDEDDIE----LEPERNSRNWEEIIPESQRRRIEEEERQKELEE 1062
Query: 767 ----PERSNKRKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNL 818
P N K+ GSE + + R + ++ + P G + +
Sbjct: 1063 IYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSITERKRPKKRGRPRTIPRENIKGF 1122
Query: 819 SKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
S + RF ++ KFG ++ +ARDA + + + L +++ +GC +A++ S
Sbjct: 1123 SDAEIRRFIKSYKKFGGPLERLDAVARDA--ELVDKSETDLRRLGELVHNGCIKALKDNS 1180
Score = 271 (100.5 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 126/451 (27%), Positives = 198/451 (43%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 960 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETRENEPGPLTVGDELLSQFK 1016
Query: 721 VANFCGA-EDDGSFW----SR-W--IKPEA----VAQAEDA-------LAPRAARNTKSY 761
VANF EDD SR W I PE+ + + E + PR K
Sbjct: 1017 VANFSNMDEDDIELEPERNSRNWEEIIPESQRRRIEEEERQKELEEIYMLPRMRNCAKQI 1076
Query: 762 A-EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK 820
+ +E RS R+ GS+ ER KR K ++P R+ G S
Sbjct: 1077 SFNGSEGRRSRSRRYSGSDSDSITER--KRPKKRGRPRTIP---------RENIKG-FSD 1124
Query: 821 RDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD 879
+ RF ++ KFG ++ +ARDA + + + L +++ +GC +A++ S
Sbjct: 1125 AEIRRFIKSYKKFGGPLERLDAVARDA--ELVDKSETDLRRLGELVHNGCIKALKDNSSG 1182
Query: 880 P----------KGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK 929
KGP GV V A +I+ EEL L K I + K++ + + K
Sbjct: 1183 QERAGGRLGKVKGPTFR-ISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTK 1241
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRA 989
+++ W + DD+ LL+GI+ +G+G+WE I++D L LT+KI P + P+A
Sbjct: 1242 AAHFD--IDWGKEDDSNLLVGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKK----PQA 1295
Query: 990 PNLKERANALLEMELXXXXXXXXXXXXXRKASKKGREKSENILN-MPISRLKRDKKGKPG 1048
L+ RA+ L+++ L + K R K+ N N M S++K + K
Sbjct: 1296 KQLQTRADYLIKL-LNKDLARKEAQRLAGAGNSK-RRKTRNKKNKMKASKIKEEIKSD-S 1352
Query: 1049 SAKVNFQTTKDRFHKPQRVEQPLTKEEGEMS 1079
S + + ++ +D + +V + + E E S
Sbjct: 1353 SPQPSEKSDEDDDEEDNKVNE-IKSENKEKS 1382
Score = 91 (37.1 bits), Expect = 2.6e-195, Sum P(2) = 2.6e-195
Identities = 49/217 (22%), Positives = 90/217 (41%)
Query: 1031 ILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEG----EMSDNEEVYE 1086
+LN ++R + + G++K K K ++++ + + E SD ++ E
Sbjct: 1308 LLNKDLARKEAQRLAGAGNSKRRKTRNKKNKMKASKIKEEIKSDSSPQPSEKSDEDDDEE 1367
Query: 1087 QFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLP----KEKVASVFPSFCWHI--PLY 1140
K V ++ + +I L + ATS+ +P E++ S C P+
Sbjct: 1368 DNK-VNEIKSENKEKSKKIPLLDTPVHITATSEPVPISEESEELDQKTFSVCKERMRPVK 1426
Query: 1141 SRIKHLTSL-LFFHFIQVLSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMRLWNYVS 1198
+ +K L + L R L IG I + + E+ E KQ R LW +VS
Sbjct: 1427 AALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKN--LWIFVS 1484
Query: 1199 TFSNLSGEKLHQIYSKLKQERQEEAGIGPSHINGSAS 1235
F+ KLH++Y ++RQE +I+ + +
Sbjct: 1485 KFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVN 1521
Score = 44 (20.5 bits), Expect = 9.5e-193, Sum P(3) = 9.5e-193
Identities = 21/83 (25%), Positives = 36/83 (43%)
Query: 1213 SKLKQERQEEAGIGPSHINGSASGSIDNDLNFSTFNRHAERQKGHKNVST-YQMT---EP 1268
SK+K+E + ++ PS + DN +N + + E+ K + T +T EP
Sbjct: 1342 SKIKEEIKSDSSPQPSEKSDEDDDEEDNKVN-EIKSENKEKSKKIPLLDTPVHITATSEP 1400
Query: 1269 I-----HKGIDPKKFEAWKRRRR 1286
+ + +D K F K R R
Sbjct: 1401 VPISEESEELDQKTFSVCKERMR 1423
Score = 39 (18.8 bits), Expect = 9.5e-193, Sum P(3) = 9.5e-193
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1158 LSKIRN-YLQLIGRRID-QIVLEHEEEL 1183
L K++ ++ G +++ ++V+ HEEEL
Sbjct: 1190 LGKVKGPTFRISGVQVNAKLVISHEEEL 1217
Score = 39 (18.8 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 588 DSDWNPQNDLQAMSRAHRI----GQQEVVNIYRFVTSKSVEED 626
+SD+ P+N +++ RI G++ R + S EED
Sbjct: 176 ESDYEPKNKVKSRKPPSRIKPKSGKKSTGQKKRQLDSSEEEED 218
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 1820 (645.7 bits), Expect = 6.9e-195, Sum P(2) = 6.9e-195
Identities = 412/900 (45%), Positives = 556/900 (61%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + E+++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 289 FEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNA 348
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ D+ KQ VERIIA K ++G +Y KW+GL Y+E +WE
Sbjct: 349 SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGY--PDYYCKWQGLPYSECSWE 406
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK---LR 178
+I Q IDEY +R + K D + K + L +QP ++ G + LR
Sbjct: 407 DGALISKKFQACIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQPSYIGGHESLELR 464
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
DYQL GLN+L +SW + ILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 465 DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL 524
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +E + W MN +VY+G SR + + +E+ + + + +KFN LLTTYE++LKDK
Sbjct: 525 TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT--KRLKFNILLTTYEILLKDK 582
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
A L + W ++ VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+
Sbjct: 583 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 642
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF S +DF + + E A+LH EL P +LRR+ KDVEKSLP K+E+ILR+E
Sbjct: 643 MPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 699
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L + D+ +
Sbjct: 700 MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDN----NEF 755
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQR
Sbjct: 756 YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQR 815
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 816 LDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 875
Query: 599 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSW------R 652
A +RAHRIGQ++ VNIYR VT SVEEDILERAKKKMVLDHLVIQ+++ G
Sbjct: 876 AQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSA 935
Query: 653 RKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
N ELSAIL+FGAEELFKE +E+ + MDID
Sbjct: 936 PSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLT 992
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAP----RAARNTKSYAEANE 766
S FKVANF ++D ++PE ++ + + P R + E E
Sbjct: 993 VGDELLSQFKVANFSNMDEDDIE----LEPERNSKNWEEIIPEDQRRRLEEEERQKELEE 1048
Query: 767 ----PERSNKRKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNL 818
P N K+ GSE + + R + ++ S P G + +
Sbjct: 1049 IYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGF 1108
Query: 819 SKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
S + RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1109 SDAEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDNS 1166
Score = 275 (101.9 bits), Expect = 8.4e-23, Sum P(2) = 8.4e-23
Identities = 124/458 (27%), Positives = 194/458 (42%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 946 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLTVGDELLSQFK 1002
Query: 721 VANFCGAEDD---------GSFWSRWIKPEAVAQAEDA----------LAPRAARNTKSY 761
VANF ++D W I + + E+ + PR K
Sbjct: 1003 VANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQI 1062
Query: 762 A-EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK 820
+ +E RS R+ GS+ ER KR K ++P R+ G S
Sbjct: 1063 SFNGSEGRRSRSRRYSGSDSDSISER--KRPKKRGRPRTIP---------RENIKG-FSD 1110
Query: 821 RDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD 879
+ RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1111 AEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDNSSG 1168
Query: 880 P----------KGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK 929
KGP GV V A +I+ EEL L K I + KQ+ + + K
Sbjct: 1169 TERTGGRLGKVKGPTFR-ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTK 1227
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRA 989
+++ W + DD+ LL+GI+ +G+G+WE I++D L LT KI P + P+A
Sbjct: 1228 AAHFD--IDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKK----PQA 1281
Query: 990 PNLKERANALLEM---ELXXXXXXXXXXXXXRKASKKGREKSENILNMPISR-LKRDKKG 1045
L+ RA+ L+++ +L K K +K++ + ++ + +K D
Sbjct: 1282 KQLQTRADYLIKLLSRDLAKKEAQRLSGAGGSKRRKARAKKNKAMKSIKVKEEMKSDSSP 1341
Query: 1046 KPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEE 1083
P S K + KD V+ P K + E D+EE
Sbjct: 1342 LP-SEKSDEDDDKDEITS---VKHPNKKIKTER-DSEE 1374
Score = 90 (36.7 bits), Expect = 6.9e-195, Sum P(2) = 6.9e-195
Identities = 61/275 (22%), Positives = 114/275 (41%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K S++ RE E + R ++K+ K + +F+ ++ K ++ KEE
Sbjct: 1383 KKESEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRENKVKEAIQKEKDIKEEKL 1442
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMA--DEIRTLQRLQRLQATSDNLPKEKVASVFPSFCW 1135
E E+ K+ + + A + + + + L + ++ KE++ V +
Sbjct: 1443 NESKSESKERSKKSSVSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALK- 1501
Query: 1136 HIPLYSRIKHLTSLLFFHFIQVLSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMRLW 1194
L K L+ + L R L IG I + + E+ E KQ R LW
Sbjct: 1502 --QLDRPEKGLSER------EQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKN--LW 1551
Query: 1195 NYVSTFSNLSGEKLHQIYSKLKQERQEEAGIGP--SHINGSASGSIDND-LNFSTFNRHA 1251
+VS F+ KLH++Y ++RQE S++N + D + L +T + +
Sbjct: 1552 IFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNAQVIRNPDVERLKENTNHDDS 1611
Query: 1252 ERQK--GHKNVSTYQ-MTEPIHKGIDPKKFEAWKR 1283
R +++S Y + H+G KK ++ KR
Sbjct: 1612 SRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKR 1646
Score = 39 (18.8 bits), Expect = 1.7e-189, Sum P(2) = 1.7e-189
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1158 LSKIRN-YLQLIGRRID-QIVLEHEEEL 1183
L K++ ++ G +++ ++V+ HEEEL
Sbjct: 1176 LGKVKGPTFRISGVQVNAKLVISHEEEL 1203
Score = 37 (18.1 bits), Expect = 2.8e-189, Sum P(2) = 2.8e-189
Identities = 15/80 (18%), Positives = 34/80 (42%)
Query: 1046 KPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEI 1105
K + K+ + + +P + ++E+ E + E E +E+K E +D+ +
Sbjct: 1360 KHPNKKIKTERDSEERPEPDVFIKKESEEKREAKEKENKRELKREIKEKEDKKDIKEKDF 1419
Query: 1106 RTLQRLQRLQATSDNLPKEK 1125
+ +R + + KEK
Sbjct: 1420 KE----KRENKVKEAIQKEK 1435
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 1799 (638.3 bits), Expect = 9.4e-195, Sum P(3) = 9.4e-195
Identities = 420/959 (43%), Positives = 569/959 (59%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQN--LSGFKKVLNYAKKVVEDVRFRKMV 62
FD+E D +E+++LIKWKG S++H W+S LQ + G KK+ N+ KK E ++ V
Sbjct: 280 FDTEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKV 339
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ ++ KQ VER IA K + N EYL KW GL Y+E +WE
Sbjct: 340 SPEDVEYFNCQQELASELNKQYQIVEREIAHS-RKPAPSN-EPEYLCKWMGLPYSECSWE 397
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGG--KLRD 179
+ +I Q ID + +R + + + + K + L +QP +L G +LRD
Sbjct: 398 DEALIGKKFQSCIDSFHSRNNSKTIPTR--ECKALKQRPRFVALKKQPTYLGGENLELRD 455
Query: 180 YQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLS 239
YQLEGLN+L +SW +VILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL+
Sbjct: 456 YQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLT 515
Query: 240 NWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKA 299
+W +EF W P +NV+VY+G SR ++YE+ + + + +KFN L+TTYE++LKDK
Sbjct: 516 SWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQT--KRLKFNALITTYEILLKDKT 573
Query: 300 VLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLD 359
VL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+
Sbjct: 574 VLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLHFIM 633
Query: 360 HDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEM 419
+KF+ +DF +++ EN +LH L P +LRR+ KDVEKSLP K+E+ILRVEM
Sbjct: 634 PEKFEFWEDFEEDH---GKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEM 690
Query: 420 SPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSI 479
S LQKQYYKWIL RN+ L KG RG+ LNIV+ELKKCCNH +L + + +
Sbjct: 691 SALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE----NERE 746
Query: 480 NDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRL 539
N L +I SSGKL++LDKLL RL E +RVLIFSQMVRMLDILAEY++ K + FQRL
Sbjct: 747 NGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRL 806
Query: 540 DGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA 599
DGS K E+R QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA
Sbjct: 807 DGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQA 866
Query: 600 MSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEG------SWRR 653
+RAHRIGQ++ VNIYR VT +VEE+I+ERAKKKMVLDHLVIQ+++ G + R
Sbjct: 867 QARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGR 926
Query: 654 KKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXX 711
N EL+AIL+FGAE+LFKE +E + MDID
Sbjct: 927 SNSNPFNKEELTAILKFGAEDLFKELEGEESEPQE---MDIDEILRLAETRENEVSTSAT 983
Query: 712 XXXXXSAFKVANFCGAEDDGSFWSRWIKP-EAVAQAEDALAPRAARNTKSYAEANEPERS 770
S FKVANF ED+ R K + + E K E R
Sbjct: 984 DELL-SQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRI 1042
Query: 771 NKRKKKGSELQEPQERVHKRRKAEFSVPSVPFID-----------GASAQVRDWSYGNLS 819
KK ++ + +R+A+ S S D G VR +
Sbjct: 1043 RSSTKK-AQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGFT 1101
Query: 820 KRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSP 878
+ RF +A KFG ++ IARDA V + ++ L +++ + C A++
Sbjct: 1102 DAEIRRFIKAYKKFGLPLERLECIARDAE-LVDKSVADLK-RLGELIHNSCVSAMQEYEE 1159
Query: 879 DPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGC 937
K + G K I ++ +Q+ K I ++E+ + + P K C
Sbjct: 1160 QLK-ENASEGKGPGKKRGPTI-KISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYC 1216
Score = 213 (80.0 bits), Expect = 3.2e-16, Sum P(3) = 3.2e-16
Identities = 92/353 (26%), Positives = 154/353 (43%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQ 809
+ PR +TK A+ N+ + + K+ Q + + + P G
Sbjct: 1038 MLPRIRSSTKK-AQTNDSDSDTESKR-----QAQRSSASESETDDSDDDKKPKRRGRPRS 1091
Query: 810 VRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDA---GGAVATAPQ--EVVVELFD 863
VR + + RF +A KFG ++ IARDA +VA + E++
Sbjct: 1092 VRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCV 1151
Query: 864 ILIDGCREAVEVGSPDPKGP-----PLLDFFGVSVKANDLINRVEELQLLAKRISRYEDP 918
+ E ++ + + KGP P + GV V +I EE ++L K I +
Sbjct: 1152 SAMQEYEEQLKENASEGKGPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEE 1211
Query: 919 IKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLT-KKIAPV 977
K++ + +K +++ W DD+RLLLGI+ HG+GNWE I+ D L LT KKI PV
Sbjct: 1212 KKKYCLTCRVKAAHFD--VEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKKILPV 1269
Query: 978 ELQHHETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXRKAS---KKGREKSENILNM 1034
E P+ L+ RA+ LL++ L +A +K R K EN
Sbjct: 1270 ETDKK----PQGKQLQTRADYLLKL-LRKSLEKKGAVTGGEEAKLKKRKPRVKKEN--KE 1322
Query: 1035 PISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQ 1087
P RLK + + S + + +++ K +E+ K++ + +N+E E+
Sbjct: 1323 P--RLKDEHGVEFSSPRHSDNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEK 1373
Score = 82 (33.9 bits), Expect = 9.4e-195, Sum P(3) = 9.4e-195
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMR-LWNYVSTFSNLSGEKLHQIYSKLK 1216
L RN L IG RI + + + ++ + ++ R LW +VS F+ KLH++Y
Sbjct: 1470 LEHTRNCLLKIGDRIAECLKAYSDQ--EHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAH 1527
Query: 1217 QERQEE 1222
++R +E
Sbjct: 1528 KKRSQE 1533
Score = 59 (25.8 bits), Expect = 3.2e-16, Sum P(3) = 3.2e-16
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 82 KQNSQ-VERIIADRISKD-SSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKA 139
+ NS+ +E+++ R+ K ++G T Y ++ G + EKDE Q I ++K
Sbjct: 241 QDNSETIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEKDE--SEVQYLI-KWKG 297
Query: 140 REAAMA--EQGKMVDLQRKKGKASL----RKLDEQPEWLRGGKLRDYQLEGLN 186
+ E + + Q+ KG L +K DE +WL GK+ +E N
Sbjct: 298 WSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWL--GKVSPEDVEYFN 348
Score = 44 (20.5 bits), Expect = 9.4e-195, Sum P(3) = 9.4e-195
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRV---EQPLTKE 1074
++ R+ E S+ K++KK K G AK + ++ + + P + +P+
Sbjct: 1371 KEKQMSSRKDKEGDKERKKSKDKKEKKPKGGDAKSSSKSKRSQ--GPVHITAGSEPVPIG 1428
Query: 1075 EGEMSD-NEEVYEQFKE 1090
E E D ++E + KE
Sbjct: 1429 EDEDDDLDQETFSICKE 1445
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 1820 (645.7 bits), Expect = 1.4e-194, Sum P(2) = 1.4e-194
Identities = 412/900 (45%), Positives = 556/900 (61%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + E+++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 306 FEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNA 365
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ D+ KQ VERIIA K ++G +Y KW+GL Y+E +WE
Sbjct: 366 SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGY--PDYYCKWQGLPYSECSWE 423
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK---LR 178
+I Q IDEY +R + K D + K + L +QP ++ G + LR
Sbjct: 424 DGALISKKFQACIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQPSYIGGHESLELR 481
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
DYQL GLN+L +SW + ILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 482 DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL 541
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +E + W MN +VY+G SR + + +E+ + + + +KFN LLTTYE++LKDK
Sbjct: 542 TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT--KRLKFNILLTTYEILLKDK 599
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
A L + W ++ VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+
Sbjct: 600 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 659
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF S +DF + + E A+LH EL P +LRR+ KDVEKSLP K+E+ILR+E
Sbjct: 660 MPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 716
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L + D+ +
Sbjct: 717 MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDN----NEF 772
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQR
Sbjct: 773 YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQR 832
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 833 LDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 892
Query: 599 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSW------R 652
A +RAHRIGQ++ VNIYR VT SVEEDILERAKKKMVLDHLVIQ+++ G
Sbjct: 893 AQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSA 952
Query: 653 RKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
N ELSAIL+FGAEELFKE +E+ + MDID
Sbjct: 953 PSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLT 1009
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAP----RAARNTKSYAEANE 766
S FKVANF ++D ++PE ++ + + P R + E E
Sbjct: 1010 VGDELLSQFKVANFSNMDEDDIE----LEPERNSKNWEEIIPEDQRRRLEEEERQKELEE 1065
Query: 767 ----PERSNKRKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNL 818
P N K+ GSE + + R + ++ S P G + +
Sbjct: 1066 IYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGF 1125
Query: 819 SKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
S + RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1126 SDAEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDNS 1183
Score = 272 (100.8 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 129/497 (25%), Positives = 206/497 (41%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 963 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLTVGDELLSQFK 1019
Query: 721 VANFCGAEDD---------GSFWSRWIKPEAVAQAEDA----------LAPRAARNTKSY 761
VANF ++D W I + + E+ + PR K
Sbjct: 1020 VANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQI 1079
Query: 762 A-EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK 820
+ +E RS R+ GS+ ER KR K ++P R+ G S
Sbjct: 1080 SFNGSEGRRSRSRRYSGSDSDSISER--KRPKKRGRPRTIP---------RENIKG-FSD 1127
Query: 821 RDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD 879
+ RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1128 AEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDNSSG 1185
Query: 880 P----------KGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK 929
KGP GV V A +I+ EEL L K I + KQ+ + + K
Sbjct: 1186 TERTGGRLGKVKGPTFR-ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTK 1244
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRA 989
+++ W + DD+ LL+GI+ +G+G+WE I++D L LT KI P + P+A
Sbjct: 1245 AAHFD--IDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKK----PQA 1298
Query: 990 PNLKERANALLEM---ELXXXXXXXXXXXXXRKASKKGREKSENILNMPISR-LKRDKKG 1045
L+ RA+ L+++ +L K K +K++ + ++ + +K D
Sbjct: 1299 KQLQTRADYLIKLLSRDLAKKEAQRLSGAGGSKRRKARAKKNKAMKSIKVKEEMKSDSSP 1358
Query: 1046 KPGSA------KVNFQTT--KDRFHKPQRVEQPL-TKEEGEMSDNEEVYEQFKEVKWMEW 1096
P K+N + K+R K + P+ GE E E+ + K
Sbjct: 1359 LPSEKSDEDDDKLNESKSESKERSKKSSVSDAPVHITASGEPVPISEESEELDQ-KTFSI 1417
Query: 1097 CEDVMADEIRTLQRLQR 1113
C++ M L++L R
Sbjct: 1418 CKERMRPVKAALKQLDR 1434
Score = 87 (35.7 bits), Expect = 1.4e-194, Sum P(2) = 1.4e-194
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLK 1216
L R L IG I + + E+ E KQ R LW +VS F+ KLH++Y
Sbjct: 1445 LEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKN--LWIFVSKFTEFDARKLHKLYKHAI 1502
Query: 1217 QERQEEAGIGP--SHINGSASGSIDND-LNFSTFNRHAERQK--GHKNVSTYQ-MTEPIH 1270
++RQE S++N + D + L +T + + R +++S Y + H
Sbjct: 1503 KKRQESQQNNDQNSNLNAQVIRNPDVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRH 1562
Query: 1271 KGIDPKKFEAWKR 1283
+G KK ++ KR
Sbjct: 1563 QGDSYKKSDSRKR 1575
Score = 39 (18.8 bits), Expect = 1.7e-189, Sum P(2) = 1.7e-189
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1158 LSKIRN-YLQLIGRRID-QIVLEHEEEL 1183
L K++ ++ G +++ ++V+ HEEEL
Sbjct: 1193 LGKVKGPTFRISGVQVNAKLVISHEEEL 1220
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 1820 (645.7 bits), Expect = 3.0e-194, Sum P(2) = 3.0e-194
Identities = 413/900 (45%), Positives = 557/900 (61%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + E+++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 307 FEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNA 366
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ D+ KQ VERIIA K ++G +Y KW+GL Y+E +WE
Sbjct: 367 SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGY--PDYYCKWQGLPYSECSWE 424
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRG--G-KLR 178
+I Q IDEY +R + K D + K + L +QP ++ G G +LR
Sbjct: 425 DGALISKKFQACIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQPSYIGGHEGLELR 482
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
DYQL GLN+L +SW + ILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 483 DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL 542
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +E + W MN +VY+G SR + + +E+ + + + +KFN LLTTYE++LKDK
Sbjct: 543 TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQT--KRLKFNILLTTYEILLKDK 600
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
A L + W ++ VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+
Sbjct: 601 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF S +DF + + E A+LH EL P +LRR+ KDVEKSLP K+E+ILR+E
Sbjct: 661 MPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 717
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L + D+ +
Sbjct: 718 MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDN----NEF 773
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQR
Sbjct: 774 YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQR 833
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 834 LDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 893
Query: 599 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSW------R 652
A +RAHRIGQ++ VNIYR VT SVEEDILERAKKKMVLDHLVIQ+++ G
Sbjct: 894 AQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSA 953
Query: 653 RKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
N ELSAIL+FGAEELFKE +E+ + MDID
Sbjct: 954 PSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLT 1010
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAP----RAARNTKSYAEANE 766
S FKVANF ++D ++PE ++ + + P R + E E
Sbjct: 1011 VGDELLSQFKVANFSNMDEDDIE----LEPERNSKNWEEIIPEDQRRRLEEEERQKELEE 1066
Query: 767 ----PERSNKRKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNL 818
P N K+ GSE + + R + ++ S P G + +
Sbjct: 1067 IYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRPRTIPRENIKGF 1126
Query: 819 SKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
S + RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1127 SDAEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDSS 1184
Score = 260 (96.6 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 111/421 (26%), Positives = 177/421 (42%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 964 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLTVGDELLSQFK 1020
Query: 721 VANFCGAEDD---------GSFWSRWIKPEAVAQAEDA----------LAPRAARNTKSY 761
VANF ++D W I + + E+ + PR K
Sbjct: 1021 VANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQI 1080
Query: 762 A-EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK 820
+ +E RS R+ GS+ E KR K ++P R+ G S
Sbjct: 1081 SFNGSEGRRSRSRRYSGSDSDSISEG--KRPKKRGRPRTIP---------RENIKG-FSD 1128
Query: 821 RDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD 879
+ RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1129 AEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDSSSG 1186
Query: 880 P----------KGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK 929
KGP GV V A +I+ EEL L K I + KQ+ + + K
Sbjct: 1187 TERTGGRLGKVKGPTFR-ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTK 1245
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRA 989
+++ W + DD+ LL+GI+ +G+G+WE I++D L LT KI P + P+A
Sbjct: 1246 AAHFD--IDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKK----PQA 1299
Query: 990 PNLKERANALLEM---ELXXXXXXXXXXXXXRKASKKGREKSENILNMPISRLKRDKKGK 1046
L+ RA+ L+++ +L R+ ++ + K+ + + +K D
Sbjct: 1300 KQLQTRADYLIKLLSRDLAKKEALSGAGSSKRRKARAKKNKAMKSIKVK-EEIKSDSSPL 1358
Query: 1047 P 1047
P
Sbjct: 1359 P 1359
Score = 84 (34.6 bits), Expect = 3.0e-194, Sum P(2) = 3.0e-194
Identities = 35/134 (26%), Positives = 55/134 (41%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYS--- 1213
L R L IG I + + E+ E KQ R LW +VS F+ KLH++Y
Sbjct: 1444 LEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKN--LWIFVSKFTEFDARKLHKLYKHAI 1501
Query: 1214 KLKQERQEEA----GIGPSHINGSASGSIDNDLNFSTFNRHAERQKGHKNVSTYQMTEPI 1269
K +QE Q+ + + P I + + N +R + H + +
Sbjct: 1502 KKRQESQQNSDQNSNLNPHVIRNPDVERLKENTNHDDSSRDSYSSDRHLT-QYHDHHKDR 1560
Query: 1270 HKGIDPKKFEAWKR 1283
H+G KK ++ KR
Sbjct: 1561 HQGDSYKKSDSRKR 1574
Score = 39 (18.8 bits), Expect = 1.7e-189, Sum P(2) = 1.7e-189
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1158 LSKIRN-YLQLIGRRID-QIVLEHEEEL 1183
L K++ ++ G +++ ++V+ HEEEL
Sbjct: 1194 LGKVKGPTFRISGVQVNAKLVISHEEEL 1221
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 1875 (665.1 bits), Expect = 1.5e-193, P = 1.5e-193
Identities = 469/1182 (39%), Positives = 673/1182 (56%)
Query: 6 DSEP-DWNEMEFLIKWKGQSHLHCQWKS--FAELQNLSGFKKVLNYAKKVVEDVRFRKMV 62
D P D E +F +KW G SHLH W+S L N G KKV NY KK E +++
Sbjct: 228 DQIPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSA 287
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKD--SSGNVTQEYLVKWKGLSYAEAT 120
+E IE + ++M ++ ++ +VER++A + S+D + G++ EYL+KW GL Y++ T
Sbjct: 288 DKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCT 347
Query: 121 WEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR-GG---- 175
WE ++++ A + I Y R + K ++ RK+ K K + P++L+ G
Sbjct: 348 WEDEKMV--APEQIKAYYHRIENLKSPNKNSNVLRKRPK--FEKFESMPDFLKTDGESTH 403
Query: 176 KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPL 235
KLRDYQLEGLN++V +W + ILADEMGLGKT+QS+S+L L + + GP+LVVVPL
Sbjct: 404 KLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPL 463
Query: 236 STLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVG--RPIKFNTLLTTYEV 293
ST++ W KEF +W P MN++VY+G SR++ +QYE++ VG + +K N +LTTYE+
Sbjct: 464 STMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWF----VGGTKKMKINAILTTYEI 519
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWA 353
+LKDKA LS I W L+VDEAHRLKN E+ LY +L++F +KLLITGTPLQNS++ELWA
Sbjct: 520 LLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWA 579
Query: 354 LLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIER 413
LLHF+ +KF ++F + N S N ++ LH +L P +LRR+ KDVEKSLPPK E+
Sbjct: 580 LLHFIMPEKFDCWEEF-ETAHNES--NHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQ 636
Query: 414 ILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGY 473
ILRV+M+ QKQ+YKWIL +N+ +L+KGV+G+ +N+V+ELKKCCNH L DH Y
Sbjct: 637 ILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIY 696
Query: 474 GGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKG 533
D +L++++ SSGKL++LDKLL RL + HRVLIFSQMV MLDIL EY+ +
Sbjct: 697 D-DAQ----GRLQQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRR 751
Query: 534 FQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNP 593
F QRLDGS +A+LR QA+DH+NAPGS DF FLLSTRAGGLGINLATADTVIIFDSDWNP
Sbjct: 752 FPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNP 811
Query: 594 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRR 653
QNDLQAMSRAHRIGQ + VNIYR VT SVEE+I+ERAK+K+VLDHLVIQ+++ G
Sbjct: 812 QNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVL 871
Query: 654 KKQRKGN--------ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXX 705
K + ELSAIL+FGA ELFKE +E+ + +DID
Sbjct: 872 SKNATASGSVPFDKQELSAILKFGAVELFKEKEGEEQEPE----VDIDRILMGAETREAE 927
Query: 706 XXXXXXXXXXXSAFKVANFCGAE--DDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAE 763
S+FK ANF E D + W A+ ED K AE
Sbjct: 928 EEVMKENELL-SSFKYANFAIDEEKDIAAATDEWA---AIIPEEDRNRILEEERMKELAE 983
Query: 764 ANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDA 823
N R +RK+ ++ E + + D + + + GN + +
Sbjct: 984 MNLAPR--QRKQPIPQVVEDDDGDDDEEE-----------DDTGKKKKKKAVGNFTIPEI 1030
Query: 824 TRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAV-EVGSPDPK 881
RF ++ KF +++ IA+DA + + + +L + L + C++A E S +
Sbjct: 1031 KRFIKSFRKFSMPLNRLEEIAQDA--ELEEHSTDEMKKLVESLSEACKKAADEFDSNEKN 1088
Query: 882 GPPLLDFFGVSVKANDLINRVE--ELQLLAKRISRYEDPIKQFRVL--------SYLKPS 931
G D + D+ + + + K+I R +K + S+ P+
Sbjct: 1089 G----DAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKSEETKTSFKPPA 1144
Query: 932 N--WSKG--CGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLP 987
N KG W++ DD+ LLLG+ +G+G+WE I++D LGL KI + +T P
Sbjct: 1145 NAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKD----KTKKP 1200
Query: 988 RAPNLKERANALLEMELXXXXXXXXXXXXXRKASKK--GREKSE-NILNMPIS--RLKRD 1042
+ NL+ R + LL++ RKA G EK + + N+P + K++
Sbjct: 1201 QGKNLQVRVDYLLKLMSKDKVKTTEKKERKRKADDVPVGPEKKKRHTNNVPQEGEKKKKE 1260
Query: 1043 KKGKPGSAKVNFQTTK---DRFHKPQRVEQPLTKEEGE-MSDNEEVYEQFKEVKWMEWCE 1098
KK + S+ + Q D+ +E K E + V++ K++K + +
Sbjct: 1261 KKEEKNSSSLKDQLALLSIDKSLYGGALEDSSAKPFLECVKLCMPVHKYMKKLKEAQEAK 1320
Query: 1099 DVMADEIRTLQRL-----QRLQATSDNLPKEKVASVFPSFCW 1135
+ ADE + L RL + L+ PK + + ++ W
Sbjct: 1321 N-QADEAKYLTRLGDSFLENLETLIKKKPKTNIRKWY-NYLW 1360
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 1811 (642.6 bits), Expect = 4.3e-193, Sum P(2) = 4.3e-193
Identities = 423/960 (44%), Positives = 572/960 (59%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQN--LSGFKKVLNYAKKVVEDVRFRKMV 62
FDSE D E+++LIKWKG S++H W+S LQ + G KK+ N+ KK E ++ V
Sbjct: 300 FDSEKDEGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKV 359
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ ++ KQ VER+I +R K + N EYL KW GL Y+E +WE
Sbjct: 360 SPEDVEYFNCQQELASELNKQYQIVERVIGNR--KPAPSN-EPEYLCKWMGLPYSECSWE 416
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGG--KLRD 179
+ +I Q ID + +R + + + + K + L +QP +L G +LRD
Sbjct: 417 DEALIGKKFQSCIDSFHSRNNSKTIPTR--ECKALKQRPRFVALKKQPAYLGGENLELRD 474
Query: 180 YQLEGLNFLVNSWRNDTN-VILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
YQLEGLN+L +SW N +N VILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 475 YQLEGLNWLAHSWCNRSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTL 534
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +EF W P +NV+VY+G SR ++YE+ + + + +KFN L+TTYE++LKDK
Sbjct: 535 TSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQT--KRLKFNALITTYEILLKDK 592
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
VL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+
Sbjct: 593 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 652
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF+ +DF +++ EN +LH L P +LRR+ KDVEKSLP K+E+ILRVE
Sbjct: 653 MPEKFEFWEDFEEDH---GKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVE 709
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L KG RG+ LNIV+ELKKCCNH +L + + +
Sbjct: 710 MSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE----NER 765
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L +I SSGKL++LDKLL RL E +RVLIFSQMVRMLDILAEY++ K + FQR
Sbjct: 766 ENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQR 825
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS K E+R QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 826 LDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 885
Query: 599 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEG------SWR 652
A +RAHRIGQ++ VNIYR VT +VEE+I+ERAKKKMVLDHLVIQ+++ G +
Sbjct: 886 AQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSG 945
Query: 653 RKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
R N EL+AIL+FGAE+LFKE +E + MDID
Sbjct: 946 RSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQE---MDIDEILRLAETRENEVSTSA 1002
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKP-EAVAQAEDALAPRAARNTKSYAEANEPER 769
S FKVANF ED+ R K + + E K E R
Sbjct: 1003 TDELL-SQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPR 1061
Query: 770 SNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFID-----------GASAQVRDWSYGNL 818
KK ++ + +R+A+ S S D G VR
Sbjct: 1062 IRSSTKK-AQTNDSDSDTESKRQAQRSSASESETDESDDDKKPKRRGRPRSVRKDLVEGF 1120
Query: 819 SKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
+ + RF +A KFG ++ IARDA V + ++ L +++ + C A++
Sbjct: 1121 TDAEIRRFIKAYKKFGLPLERLECIARDAE-LVDKSVADLK-RLGELIHNSCVSAMQEYE 1178
Query: 878 PDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGC 937
K + G K I ++ +Q+ K I ++E+ + + P K C
Sbjct: 1179 EQLK-ENASEGKGPGKKRGPTI-KISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYC 1236
Score = 217 (81.4 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 95/354 (26%), Positives = 156/354 (44%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQ 809
+ PR +TK A+ N+ + + K+ Q + + E P G
Sbjct: 1058 MLPRIRSSTKK-AQTNDSDSDTESKR-----QAQRSSASESETDESDDDKKPKRRGRPRS 1111
Query: 810 VRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDA---GGAVATAPQ--EVVVELFD 863
VR + + RF +A KFG ++ IARDA +VA + E++
Sbjct: 1112 VRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCV 1171
Query: 864 ILIDGCREAVEVGSPDPKGP-----PLLDFFGVSVKANDLINRVEELQLLAKRISRYEDP 918
+ E ++ + + KGP P + GV V +I EE ++L K I +
Sbjct: 1172 SAMQEYEEQLKENASEGKGPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEE 1231
Query: 919 IKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLT-KKIAPV 977
K++ + +K +++ W DD+RLLLGI+ HG+GNWE I+ D L LT KKI PV
Sbjct: 1232 KKKYCLTCRVKAAHFD--VEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKKILPV 1289
Query: 978 ELQHHETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXRKAS---KKGREKSENILNM 1034
E P+ L+ RA+ LL++ L +A +K R K EN
Sbjct: 1290 ETDKK----PQGKQLQTRADYLLKL-LRKSLEKEGAVTGGEEAKLKKRKPRVKKEN--KA 1342
Query: 1035 PISRLKRDKKG-KPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQ 1087
P RLK D+ G + S + + +++ K +E+ K++ + +N+E E+
Sbjct: 1343 P--RLK-DEHGIEFSSPRHSDNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEK 1393
Score = 82 (33.9 bits), Expect = 4.3e-193, Sum P(2) = 4.3e-193
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMR-LWNYVSTFSNLSGEKLHQIYSKLK 1216
L RN L IG RI + + + ++ + ++ R LW +VS F+ KLH++Y
Sbjct: 1490 LEHTRNCLLKIGDRIAECLKAYSDQ--EHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAH 1547
Query: 1217 QERQEE 1222
++R +E
Sbjct: 1548 KKRSQE 1553
Score = 47 (21.6 bits), Expect = 2.2e-189, Sum P(2) = 2.2e-189
Identities = 37/179 (20%), Positives = 78/179 (43%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRV---EQPLTKE 1074
++ R+ E S+ K++KK K G AK + ++ + + P + +P+
Sbjct: 1391 KEKQMSSRKDKEGDKERKKSKDKKEKKPKGGDAKSSSKSKRSQ--GPVHITAGSEPVPIG 1448
Query: 1075 EGEMSD-NEEVYEQFKE-VKWMEWCEDVMADEIRTLQRLQRLQATSDNLPK--EKVASVF 1130
E E D ++E + KE ++ ++ + + L ++L+ T + L K +++A
Sbjct: 1449 EDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLNVQEQLEHTRNCLLKIGDRIAECL 1508
Query: 1131 PSFC--WHIPLYSRIKHLTSLLFFHFIQVLSKIRNYLQLIGRRIDQIVLEHEEELYKQD 1187
++ HI L+ R + F F K+ ++ ++ Q E E+E K+D
Sbjct: 1509 KAYSDQEHIKLWRRNLWIFVSKFTEFDA--RKLHKLYKMAHKKRSQ---EEEKEQKKKD 1562
>UNIPROTKB|I3L6N4 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
Uniprot:I3L6N4
Length = 1798
Score = 1804 (640.1 bits), Expect = 1.1e-192, Sum P(2) = 1.1e-192
Identities = 411/900 (45%), Positives = 553/900 (61%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + E+++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 301 FEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNA 360
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ D+ KQ VERIIA K ++G +Y KW+GL Y+E +WE
Sbjct: 361 SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGY--PDYYCKWQGLPYSECSWE 418
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRG--G-KLR 178
+I Q IDEY +R + K D + K + L +QP ++ G G +LR
Sbjct: 419 DGALISKKFQACIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQPSYIGGHEGLELR 476
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
DYQL GLN+L +SW + ILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 477 DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL 536
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +E + W MN +VY+G SR + + +E+ + + + +KFN LLTTYE++LKDK
Sbjct: 537 TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT--KRLKFNILLTTYEILLKDK 594
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
A L + W ++ VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+
Sbjct: 595 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 654
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF S +DF + + E A+LH EL P +LRR+ KDVEKSLP K+E+ILR+E
Sbjct: 655 MPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 711
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L + D+ +
Sbjct: 712 MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDN----NEF 767
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQR
Sbjct: 768 YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQR 827
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 828 LDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 887
Query: 599 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSW------R 652
A +RAHR G VNIYR VT SVEEDILERAKKKMVLDHLVIQ+++ G
Sbjct: 888 AQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSA 947
Query: 653 RKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
N ELSAIL+FGAEELFKE +E+ + MDID
Sbjct: 948 PSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLT 1004
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAP----RAARNTKSYAEANE 766
S FKVANF ++D ++PE ++ + + P R + E E
Sbjct: 1005 VGDELLSQFKVANFSNMDEDDIE----LEPERNSKNWEEIIPEDQRRRLEEEERQKELEE 1060
Query: 767 ----PERSNKRKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNL 818
P N K+ GSE + + R + ++ S P G + +
Sbjct: 1061 IYMLPRMRNCAKQISFNGSEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGF 1120
Query: 819 SKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
S + RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1121 SDAEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDNS 1178
Score = 280 (103.6 bits), Expect = 8.4e-23, Sum P(2) = 8.4e-23
Identities = 121/458 (26%), Positives = 192/458 (41%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 958 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLTVGDELLSQFK 1014
Query: 721 VANFCGAEDD---------GSFWSRWIKPEAVAQAEDA----------LAPRAARNTKSY 761
VANF ++D W I + + E+ + PR K
Sbjct: 1015 VANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQI 1074
Query: 762 A-EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK 820
+ +E RS R+ GS+ ER KR K ++P R+ G S
Sbjct: 1075 SFNGSEGRRSRNRRYSGSDSDSISER--KRPKKRGRPRTIP---------RENIKG-FSD 1122
Query: 821 RDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD 879
+ RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1123 AEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDNSSG 1180
Query: 880 P----------KGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK 929
KGP GV V A +I+ EEL L K I + KQ+ + + K
Sbjct: 1181 TERTGGRLGKVKGPTFR-ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTK 1239
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRA 989
+++ W + DD+ LL+GI+ +G+G+WE I++D L LT KI P + P+A
Sbjct: 1240 AAHFD--IDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKK----PQA 1293
Query: 990 PNLKERANALLEM---ELXXXXXXXXXXXXXRKASKKGREKSENILNMPISR-LKRDKKG 1045
L+ RA+ L+++ +L K K +K++ + ++ + +K D
Sbjct: 1294 KQLQTRADYLIKLLSKDLARKEAQRLSGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSP 1353
Query: 1046 KPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEE 1083
P K+ + V+ P K + E D+EE
Sbjct: 1354 LPSEKSDEDDDKKENMDEITSVKHPNKKIKTE-GDSEE 1390
Score = 85 (35.0 bits), Expect = 1.1e-192, Sum P(2) = 1.1e-192
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLK 1216
L R L IG I + + E+ E KQ R LW +VS F+ KLH++Y
Sbjct: 1532 LEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKN--LWIFVSKFTEFDARKLHKLYKHAI 1589
Query: 1217 QERQEEAGIGP--SHINGSASGSIDND-LNFSTFNRHAERQK--GHKNVSTYQ-MTEPIH 1270
++RQE S++N + D + L +T + + R +++S Y + H
Sbjct: 1590 KKRQESQQNNDQNSNLNTQVIRNPDVERLKDNTNHDDSSRDSYSSDRHLSQYHDHHKDRH 1649
Query: 1271 KGIDPKKFEAWKR 1283
+G KK ++ KR
Sbjct: 1650 QGDSYKKSDSRKR 1662
Score = 39 (18.8 bits), Expect = 4.1e-190, Sum P(3) = 4.1e-190
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1158 LSKIRN-YLQLIGRRID-QIVLEHEEEL 1183
L K++ ++ G +++ ++V+ HEEEL
Sbjct: 1188 LGKVKGPTFRISGVQVNAKLVISHEEEL 1215
Score = 38 (18.4 bits), Expect = 4.1e-190, Sum P(3) = 4.1e-190
Identities = 18/74 (24%), Positives = 29/74 (39%)
Query: 1213 SKLKQERQEEAGIGPSHINGSASGSIDNDLNFSTFNRHAERQKGHKNVSTYQMTEPIHKG 1272
+K+K+ Q+E I +N S S S + S + + V + +E +
Sbjct: 1441 NKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGEPVPISEESEEL--- 1497
Query: 1273 IDPKKFEAWKRRRR 1286
D K F K R R
Sbjct: 1498 -DQKTFSICKERMR 1510
>UNIPROTKB|I3LIS2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
Length = 1799
Score = 1804 (640.1 bits), Expect = 1.1e-192, Sum P(2) = 1.1e-192
Identities = 411/900 (45%), Positives = 553/900 (61%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + E+++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 302 FEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNA 361
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ D+ KQ VERIIA K ++G +Y KW+GL Y+E +WE
Sbjct: 362 SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGY--PDYYCKWQGLPYSECSWE 419
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRG--G-KLR 178
+I Q IDEY +R + K D + K + L +QP ++ G G +LR
Sbjct: 420 DGALISKKFQACIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQPSYIGGHEGLELR 477
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
DYQL GLN+L +SW + ILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 478 DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL 537
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +E + W MN +VY+G SR + + +E+ + + + +KFN LLTTYE++LKDK
Sbjct: 538 TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT--KRLKFNILLTTYEILLKDK 595
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
A L + W ++ VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+
Sbjct: 596 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 655
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF S +DF + + E A+LH EL P +LRR+ KDVEKSLP K+E+ILR+E
Sbjct: 656 MPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 712
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L + D+ +
Sbjct: 713 MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDN----NEF 768
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQR
Sbjct: 769 YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQR 828
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 829 LDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 888
Query: 599 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSW------R 652
A +RAHR G VNIYR VT SVEEDILERAKKKMVLDHLVIQ+++ G
Sbjct: 889 AQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSA 948
Query: 653 RKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
N ELSAIL+FGAEELFKE +E+ + MDID
Sbjct: 949 PSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLT 1005
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAP----RAARNTKSYAEANE 766
S FKVANF ++D ++PE ++ + + P R + E E
Sbjct: 1006 VGDELLSQFKVANFSNMDEDDIE----LEPERNSKNWEEIIPEDQRRRLEEEERQKELEE 1061
Query: 767 ----PERSNKRKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNL 818
P N K+ GSE + + R + ++ S P G + +
Sbjct: 1062 IYMLPRMRNCAKQISFNGSEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGF 1121
Query: 819 SKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
S + RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1122 SDAEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDNS 1179
Score = 280 (103.6 bits), Expect = 8.4e-23, Sum P(2) = 8.4e-23
Identities = 121/458 (26%), Positives = 192/458 (41%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 959 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLTVGDELLSQFK 1015
Query: 721 VANFCGAEDD---------GSFWSRWIKPEAVAQAEDA----------LAPRAARNTKSY 761
VANF ++D W I + + E+ + PR K
Sbjct: 1016 VANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQI 1075
Query: 762 A-EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK 820
+ +E RS R+ GS+ ER KR K ++P R+ G S
Sbjct: 1076 SFNGSEGRRSRNRRYSGSDSDSISER--KRPKKRGRPRTIP---------RENIKG-FSD 1123
Query: 821 RDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD 879
+ RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1124 AEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDNSSG 1181
Query: 880 P----------KGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK 929
KGP GV V A +I+ EEL L K I + KQ+ + + K
Sbjct: 1182 TERTGGRLGKVKGPTFR-ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTK 1240
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRA 989
+++ W + DD+ LL+GI+ +G+G+WE I++D L LT KI P + P+A
Sbjct: 1241 AAHFD--IDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKK----PQA 1294
Query: 990 PNLKERANALLEM---ELXXXXXXXXXXXXXRKASKKGREKSENILNMPISR-LKRDKKG 1045
L+ RA+ L+++ +L K K +K++ + ++ + +K D
Sbjct: 1295 KQLQTRADYLIKLLSKDLARKEAQRLSGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSP 1354
Query: 1046 KPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEE 1083
P K+ + V+ P K + E D+EE
Sbjct: 1355 LPSEKSDEDDDKKENMDEITSVKHPNKKIKTE-GDSEE 1391
Score = 85 (35.0 bits), Expect = 1.1e-192, Sum P(2) = 1.1e-192
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLK 1216
L R L IG I + + E+ E KQ R LW +VS F+ KLH++Y
Sbjct: 1533 LEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKN--LWIFVSKFTEFDARKLHKLYKHAI 1590
Query: 1217 QERQEEAGIGP--SHINGSASGSIDND-LNFSTFNRHAERQK--GHKNVSTYQ-MTEPIH 1270
++RQE S++N + D + L +T + + R +++S Y + H
Sbjct: 1591 KKRQESQQNNDQNSNLNTQVIRNPDVERLKDNTNHDDSSRDSYSSDRHLSQYHDHHKDRH 1650
Query: 1271 KGIDPKKFEAWKR 1283
+G KK ++ KR
Sbjct: 1651 QGDSYKKSDSRKR 1663
Score = 39 (18.8 bits), Expect = 4.1e-190, Sum P(3) = 4.1e-190
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1158 LSKIRN-YLQLIGRRID-QIVLEHEEEL 1183
L K++ ++ G +++ ++V+ HEEEL
Sbjct: 1189 LGKVKGPTFRISGVQVNAKLVISHEEEL 1216
Score = 38 (18.4 bits), Expect = 4.1e-190, Sum P(3) = 4.1e-190
Identities = 18/74 (24%), Positives = 29/74 (39%)
Query: 1213 SKLKQERQEEAGIGPSHINGSASGSIDNDLNFSTFNRHAERQKGHKNVSTYQMTEPIHKG 1272
+K+K+ Q+E I +N S S S + S + + V + +E +
Sbjct: 1442 NKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGEPVPISEESEEL--- 1498
Query: 1273 IDPKKFEAWKRRRR 1286
D K F K R R
Sbjct: 1499 -DQKTFSICKERMR 1511
>UNIPROTKB|F1RN66 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
Uniprot:F1RN66
Length = 1794
Score = 1804 (640.1 bits), Expect = 1.1e-192, Sum P(2) = 1.1e-192
Identities = 411/900 (45%), Positives = 553/900 (61%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + E+++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 301 FEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNA 360
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ D+ KQ VERIIA K ++G +Y KW+GL Y+E +WE
Sbjct: 361 SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGY--PDYYCKWQGLPYSECSWE 418
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRG--G-KLR 178
+I Q IDEY +R + K D + K + L +QP ++ G G +LR
Sbjct: 419 DGALISKKFQACIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQPSYIGGHEGLELR 476
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
DYQL GLN+L +SW + ILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 477 DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL 536
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +E + W MN +VY+G SR + + +E+ + + + +KFN LLTTYE++LKDK
Sbjct: 537 TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT--KRLKFNILLTTYEILLKDK 594
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
A L + W ++ VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+
Sbjct: 595 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 654
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF S +DF + + E A+LH EL P +LRR+ KDVEKSLP K+E+ILR+E
Sbjct: 655 MPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 711
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L + D+ +
Sbjct: 712 MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDN----NEF 767
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQR
Sbjct: 768 YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQR 827
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 828 LDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 887
Query: 599 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSW------R 652
A +RAHR G VNIYR VT SVEEDILERAKKKMVLDHLVIQ+++ G
Sbjct: 888 AQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSA 947
Query: 653 RKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
N ELSAIL+FGAEELFKE +E+ + MDID
Sbjct: 948 PSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLT 1004
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAP----RAARNTKSYAEANE 766
S FKVANF ++D ++PE ++ + + P R + E E
Sbjct: 1005 VGDELLSQFKVANFSNMDEDDIE----LEPERNSKNWEEIIPEDQRRRLEEEERQKELEE 1060
Query: 767 ----PERSNKRKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNL 818
P N K+ GSE + + R + ++ S P G + +
Sbjct: 1061 IYMLPRMRNCAKQISFNGSEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGF 1120
Query: 819 SKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
S + RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1121 SDAEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDNS 1178
Score = 279 (103.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 121/458 (26%), Positives = 193/458 (42%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 958 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLTVGDELLSQFK 1014
Query: 721 VANFCGAEDD---------GSFWSRWIKPEAVAQAEDA----------LAPRAARNTKSY 761
VANF ++D W I + + E+ + PR K
Sbjct: 1015 VANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQI 1074
Query: 762 A-EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK 820
+ +E RS R+ GS+ ER KR K ++P R+ G S
Sbjct: 1075 SFNGSEGRRSRNRRYSGSDSDSISER--KRPKKRGRPRTIP---------RENIKG-FSD 1122
Query: 821 RDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD 879
+ RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1123 AEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDNSSG 1180
Query: 880 P----------KGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK 929
KGP GV V A +I+ EEL L K I + KQ+ + + K
Sbjct: 1181 TERTGGRLGKVKGPTFR-ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTK 1239
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRA 989
+++ W + DD+ LL+GI+ +G+G+WE I++D L LT KI P + P+A
Sbjct: 1240 AAHFD--IDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKK----PQA 1293
Query: 990 PNLKERANALLEM---ELXXXXXXXXXXXXXRKASKKGREKSENILNMPISR-LKRDKKG 1045
L+ RA+ L+++ +L K K +K++ + ++ + +K D
Sbjct: 1294 KQLQTRADYLIKLLSKDLARKEAQRLSGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSP 1353
Query: 1046 KPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEE 1083
P S K + KD + + + K EG+ + E
Sbjct: 1354 LP-SEKSDEDDDKDEITSVKHPNKKI-KTEGDSEEKPE 1389
Score = 85 (35.0 bits), Expect = 1.1e-192, Sum P(2) = 1.1e-192
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLK 1216
L R L IG I + + E+ E KQ R LW +VS F+ KLH++Y
Sbjct: 1528 LEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKN--LWIFVSKFTEFDARKLHKLYKHAI 1585
Query: 1217 QERQEEAGIGP--SHINGSASGSIDND-LNFSTFNRHAERQK--GHKNVSTYQ-MTEPIH 1270
++RQE S++N + D + L +T + + R +++S Y + H
Sbjct: 1586 KKRQESQQNNDQNSNLNTQVIRNPDVERLKDNTNHDDSSRDSYSSDRHLSQYHDHHKDRH 1645
Query: 1271 KGIDPKKFEAWKR 1283
+G KK ++ KR
Sbjct: 1646 QGDSYKKSDSRKR 1658
Score = 39 (18.8 bits), Expect = 4.1e-190, Sum P(3) = 4.1e-190
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1158 LSKIRN-YLQLIGRRID-QIVLEHEEEL 1183
L K++ ++ G +++ ++V+ HEEEL
Sbjct: 1188 LGKVKGPTFRISGVQVNAKLVISHEEEL 1215
Score = 38 (18.4 bits), Expect = 4.1e-190, Sum P(3) = 4.1e-190
Identities = 18/74 (24%), Positives = 29/74 (39%)
Query: 1213 SKLKQERQEEAGIGPSHINGSASGSIDNDLNFSTFNRHAERQKGHKNVSTYQMTEPIHKG 1272
+K+K+ Q+E I +N S S S + S + + V + +E +
Sbjct: 1437 NKVKEAIQKEKDIKEEKLNESKSESKERSKKSSLSDAPVHITASGEPVPISEESEEL--- 1493
Query: 1273 IDPKKFEAWKRRRR 1286
D K F K R R
Sbjct: 1494 -DQKTFSICKERMR 1506
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 1797 (637.6 bits), Expect = 6.3e-192, Sum P(2) = 6.3e-192
Identities = 414/912 (45%), Positives = 557/912 (61%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + E+++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 306 FEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNA 365
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRI------------SKDSSGNVTQEYLVK 110
S E++E + +E+ D+ KQ VERII D+I S S +Y K
Sbjct: 366 SPEDVEYYNCQQELTDDLHKQYQIVERII-DKIQCKIYLVYLTAHSNQKSAAGYPDYYCK 424
Query: 111 WKGLSYAEATWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
W+GL Y+E +WE +I Q IDEY +R + K D + K + L +QP
Sbjct: 425 WQGLPYSECSWEDGALISKKFQACIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQP 482
Query: 170 EWLRG--G-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIP 226
++ G G +LRDYQL GLN+L +SW + ILADEMGLGKT+Q++S L +L + Q+
Sbjct: 483 SYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLY 542
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNT 286
GPFL+VVPLSTL++W +E + W MN +VY+G SR + + +E+ + + + +KFN
Sbjct: 543 GPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT--KRLKFNI 600
Query: 287 LLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQN 346
LLTTYE++LKDKA L + W ++ VDEAHRLKN ++ LY TL +F + ++LLITGTPLQN
Sbjct: 601 LLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQN 660
Query: 347 SVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKS 406
S++ELW+LLHF+ +KF S +DF + + E A+LH EL P +LRR+ KDVEKS
Sbjct: 661 SLKELWSLLHFIMPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKS 717
Query: 407 LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLF 466
LP K+E+ILR+EMS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L
Sbjct: 718 LPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLI 777
Query: 467 ESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILA 526
+ D+ + N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILA
Sbjct: 778 KPPDN----NEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILA 833
Query: 527 EYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVII 586
EY+ Y+ F FQRLDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+I
Sbjct: 834 EYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVI 893
Query: 587 FDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLN 646
FDSDWNPQNDLQA +RAHRIGQ++ VNIYR VT SVEEDILERAKKKMVLDHLVIQ+++
Sbjct: 894 FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMD 953
Query: 647 AEGSW------RRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXX 698
G N ELSAIL+FGAEELFKE +E+ + MDID
Sbjct: 954 TTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKR 1010
Query: 699 XXXXXXXXXXXXXXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAP----RA 754
S FKVANF ++D ++PE ++ + + P R
Sbjct: 1011 AETHENEAGPLTVGDELLSQFKVANFSNMDEDDIE----LEPERNSKNWEEIIPEDQRRR 1066
Query: 755 ARNTKSYAEANE----PERSNKRKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGA 806
+ E E P N K+ GSE + + R + ++ S P G
Sbjct: 1067 LEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGR 1126
Query: 807 SAQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDIL 865
+ + S + RF ++ KFG ++ IARDA + + + L +++
Sbjct: 1127 PRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELV 1184
Query: 866 IDGCREAVEVGS 877
+GC +A++ S
Sbjct: 1185 HNGCIKALKDSS 1196
Score = 282 (104.3 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 121/451 (26%), Positives = 195/451 (43%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 976 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEAGPLTVGDELLSQFK 1032
Query: 721 VANFCGAEDDGSFWSRWIKPEAVAQAEDALAP----RAARNTKSYAEANE----PERSNK 772
VANF ++D ++PE ++ + + P R + E E P N
Sbjct: 1033 VANFSNMDEDDIE----LEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNC 1088
Query: 773 RKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYR 828
K+ GSE + + R + ++ S P G + + S + RF +
Sbjct: 1089 AKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIK 1148
Query: 829 AVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVE--------VGSPD 879
+ KFG ++ IARDA + + + L +++ +GC +A++ G
Sbjct: 1149 SYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGDIK 1206
Query: 880 PKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGW 939
KGP GV V A +I+ EEL L K I + KQ+ + + K +++ W
Sbjct: 1207 MKGPTFR-ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYIIPCHTKAAHFD--IDW 1263
Query: 940 NQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANAL 999
+ DD+ LL+GI+ +G+G+WE I++D L LT KI P + P+A L+ RA+ L
Sbjct: 1264 GKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKK----PQAKQLQTRADYL 1319
Query: 1000 LEM---ELXXXXXXXXXXXXXRKASKKGREKSENILNMPISR-LKRDKKGKPGSAKVNFQ 1055
+++ +L K K +K++ + ++ + +K D P S K +
Sbjct: 1320 IKLLSRDLAKKEAQRLSGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSPLP-SDKSDED 1378
Query: 1056 TTKDRFHKPQRVEQPLTKEEGEMSDNEEVYE 1086
KD V+ P K + E D+EE E
Sbjct: 1379 DDKDEITS---VKHPNKKIKTER-DSEEKTE 1405
Score = 85 (35.0 bits), Expect = 6.3e-192, Sum P(2) = 6.3e-192
Identities = 59/276 (21%), Positives = 113/276 (40%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K ++ RE E + R ++K+ K + +F+ ++ K ++ KEE
Sbjct: 1411 KKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRENKVKEAIQKEKDIKEEKL 1470
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMA--DEIRTLQRLQRLQATSDNLPKEKVASVFPSFCW 1135
E E+ K+ ++ + A + + + + L + ++ KE++
Sbjct: 1471 SESKSESKERSKKSSVLDAPVHITAGGEPVPIAEESEELDQKTFSICKERMR-------- 1522
Query: 1136 HIPLYSRIKHLTSL-LFFHFIQVLSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMRL 1193
P+ + +K L + L R L IG I + + E+ E KQ R L
Sbjct: 1523 --PVKAALKQLDRPERGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKN--L 1578
Query: 1194 WNYVSTFSNLSGEKLHQIYSKLKQERQEEAGIGP--SHINGSASGSIDND-LNFSTFNRH 1250
W +VS F+ KLH++Y ++RQE S +N + D + L +T +
Sbjct: 1579 WIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSSLNTQVIRNPDVERLKENTNHDD 1638
Query: 1251 AERQK--GHKNVSTYQ-MTEPIHKGIDPKKFEAWKR 1283
+ R +++S Y + H+G KK ++ KR
Sbjct: 1639 SSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKR 1674
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 1795 (636.9 bits), Expect = 2.1e-191, Sum P(2) = 2.1e-191
Identities = 421/972 (43%), Positives = 572/972 (58%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQN--LSGFKKVLNYAKKVVEDVRFRKMV 62
FD+E D +E+++LIKWKG S++H W+S LQ + G KK+ N+ KK E ++ V
Sbjct: 309 FDTEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKV 368
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVT-------------QEYLV 109
S E++E + +E+ ++ KQ VER+IA + SK + G EYL
Sbjct: 369 SPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLC 428
Query: 110 KWKGLSYAEATWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQ 168
KW GL Y+E +WE + +I Q ID + +R + + + + K + L +Q
Sbjct: 429 KWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTR--ECKALKQRPRFVALKKQ 486
Query: 169 PEWLRGG--KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIP 226
P +L G +LRDYQLEGLN+L +SW +VILADEMGLGKT+Q++S L +L + Q+
Sbjct: 487 PTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY 546
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNT 286
GPFL+VVPLSTL++W +EF W P +NV+VY+G SR ++YE+ + + + +KFN
Sbjct: 547 GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQT--KRLKFNA 604
Query: 287 LLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQN 346
L+TTYE++LKDK VL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTPLQN
Sbjct: 605 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQN 664
Query: 347 SVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKS 406
S++ELW+LLHF+ +KF+ +DF +++ EN +LH L P +LRR+ KDVEKS
Sbjct: 665 SLKELWSLLHFIMPEKFEFWEDFEEDH---GKGRENGYQSLHKVLEPFLLRRVKKDVEKS 721
Query: 407 LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLF 466
LP K+E+ILRVEMS LQKQYYKWIL RN+ L KG RG+ LNIV+ELKKCCNH +L
Sbjct: 722 LPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLI 781
Query: 467 ESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILA 526
+ + + N L +I SSGKL++LDKLL RL E +RVLIFSQMVRMLDILA
Sbjct: 782 KPPEE----NERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILA 837
Query: 527 EYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVII 586
EY++ K + FQRLDGS K E+R QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+I
Sbjct: 838 EYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVI 897
Query: 587 FDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLN 646
FDSDWNPQNDLQA +RAHRIGQ++ VNIYR VT +VEE+I+ERAKKKMVLDHLVIQ+++
Sbjct: 898 FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMD 957
Query: 647 AEG------SWRRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXX 698
G + R N EL+AIL+FGAE+LFKE +E + MDID
Sbjct: 958 TTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQE---MDIDEILRL 1014
Query: 699 XXXXXXXXXXXXXXXXXXSAFKVANFCGAEDDGSFWSRWIKP-EAVAQAEDALAPRAARN 757
S FKVANF ED+ R K + + E
Sbjct: 1015 AETRENEVSTSATDELL-SQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEER 1073
Query: 758 TKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFID-----------GA 806
K E R KK ++ + +R+A+ S S D G
Sbjct: 1074 QKELEEIYMLPRIRSSTKK-AQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGR 1132
Query: 807 SAQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDIL 865
VR + + RF +A KFG ++ IARDA V + ++ L +++
Sbjct: 1133 PRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAE-LVDKSVADLK-RLGELI 1190
Query: 866 IDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVL 925
+ C A++ K + G K I ++ +Q+ K I ++E+ +
Sbjct: 1191 HNSCVSAMQEYEEQLK-ENASEGKGPGKKRGPTI-KISGVQVNVKSIIQHEEEFEMLHKS 1248
Query: 926 SYLKPSNWSKGC 937
+ P K C
Sbjct: 1249 IPVDPEEKKKYC 1260
Score = 216 (81.1 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 91/352 (25%), Positives = 153/352 (43%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQ 809
+ PR +TK A+ N+ + + K+ Q + + + P G
Sbjct: 1082 MLPRIRSSTKK-AQTNDSDSDTESKR-----QAQRSSASESETDDSDDDKKPKRRGRPRS 1135
Query: 810 VRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDA---GGAVATAPQ--EVVVELFD 863
VR + + RF +A KFG ++ IARDA +VA + E++
Sbjct: 1136 VRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCV 1195
Query: 864 ILIDGCREAVEVGSPDPKGP-----PLLDFFGVSVKANDLINRVEELQLLAKRISRYEDP 918
+ E ++ + + KGP P + GV V +I EE ++L K I +
Sbjct: 1196 SAMQEYEEQLKENASEGKGPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEE 1255
Query: 919 IKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVE 978
K++ + +K +++ W DD+RLLLGI+ HG+GNWE I+ D L LT KI PVE
Sbjct: 1256 KKKYCLTCRVKAAHFD--VEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVE 1313
Query: 979 LQHHETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXRKAS---KKGREKSENILNMP 1035
P+ L+ RA+ LL++ L +A +K R K EN P
Sbjct: 1314 TDKK----PQGKQLQTRADYLLKL-LRKSLEKKGAVTGGEEAKLKKRKPRVKKEN--KEP 1366
Query: 1036 ISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQ 1087
RLK + + S + + +++ K +E+ K++ + +N+E E+
Sbjct: 1367 --RLKDEHGVEFSSPRHSDNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEK 1416
Score = 82 (33.9 bits), Expect = 2.1e-191, Sum P(2) = 2.1e-191
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMR-LWNYVSTFSNLSGEKLHQIYSKLK 1216
L RN L IG RI + + + ++ + ++ R LW +VS F+ KLH++Y
Sbjct: 1512 LEHTRNCLLKIGDRIAECLKAYSDQ--EHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAH 1569
Query: 1217 QERQEE 1222
++R +E
Sbjct: 1570 KKRSQE 1575
Score = 59 (25.8 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 82 KQNSQ-VERIIADRISKD-SSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKA 139
+ NS+ +E+++ R+ K ++G T Y ++ G + EKDE Q I ++K
Sbjct: 270 QDNSETIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEKDE--SEVQYLI-KWKG 326
Query: 140 REAAMA--EQGKMVDLQRKKGKASL----RKLDEQPEWLRGGKLRDYQLEGLN 186
+ E + + Q+ KG L +K DE +WL GK+ +E N
Sbjct: 327 WSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWL--GKVSPEDVEYFN 377
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 1793 (636.2 bits), Expect = 2.7e-191, Sum P(2) = 2.7e-191
Identities = 423/975 (43%), Positives = 572/975 (58%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQN--LSGFKKVLNYAKKVVEDVRFRKMV 62
FDSE D E+++LIKWKG S++H W+S LQ + G KK+ N+ KK E ++ V
Sbjct: 295 FDSEKDEGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKV 354
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISK------DSSGNVTQ----------E 106
S E++E + +E+ ++ KQ VER+IA + SK D G + E
Sbjct: 355 SPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPGEIAHSRKPAPSNEPE 414
Query: 107 YLVKWKGLSYAEATWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKL 165
YL KW GL Y+E +WE + +I Q ID + +R + + + + K + L
Sbjct: 415 YLCKWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTR--ECKALKQRPRFVAL 472
Query: 166 DEQPEWLRGG--KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 223
+QP +L G +LRDYQLEGLN+L +SW +VILADEMGLGKT+Q++S L +L +
Sbjct: 473 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 532
Query: 224 QIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIK 283
Q+ GPFL+VVPLSTL++W +EF W P +NV+VY+G SR ++YE+ + + + +K
Sbjct: 533 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQT--KRLK 590
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 343
FN L+TTYE++LKDK VL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTP
Sbjct: 591 FNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 650
Query: 344 LQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDV 403
LQNS++ELW+LLHF+ +KF+ +DF +++ EN +LH L P +LRR+ KDV
Sbjct: 651 LQNSLKELWSLLHFIMPEKFEFWEDFEEDH---GKGRENGYQSLHKVLEPFLLRRVKKDV 707
Query: 404 EKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHP 463
EKSLP K+E+ILRVEMS LQKQYYKWIL RN+ L KG RG+ LNIV+ELKKCCNH
Sbjct: 708 EKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHC 767
Query: 464 FLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLD 523
+L + + + N L +I SSGKL++LDKLL RL E +RVLIFSQMVRMLD
Sbjct: 768 YLIKPPEE----NERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLD 823
Query: 524 ILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADT 583
ILAEY++ K + FQRLDGS K E+R QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADT
Sbjct: 824 ILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADT 883
Query: 584 VIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
V+IFDSDWNPQNDLQA +RAHRIGQ++ VNIYR VT +VEE+I+ERAKKKMVLDHLVIQ
Sbjct: 884 VVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 943
Query: 644 KLNAEG------SWRRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXX 695
+++ G + R N EL+AIL+FGAE+LFKE +E + MDID
Sbjct: 944 RMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQE---MDIDEI 1000
Query: 696 XXXXXXXXXXXXXXXXXXXXXSAFKVANFCGAEDDGSFWSRWIKP-EAVAQAEDALAPRA 754
S FKVANF ED+ R K + + E
Sbjct: 1001 LRLAETRENEVSTSATDELL-SQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEE 1059
Query: 755 ARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFID---------- 804
K E R KK ++ + +R+A+ S S D
Sbjct: 1060 EERQKELEEIYMLPRIRSSTKK-AQTNDSDSDTESKRQAQRSSASESETDESDDDKKPKR 1118
Query: 805 -GASAQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELF 862
G VR + + RF +A KFG ++ IARDA V + ++ L
Sbjct: 1119 RGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAE-LVDKSVADLK-RLG 1176
Query: 863 DILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQF 922
+++ + C A++ K + G K I ++ +Q+ K I ++E+ +
Sbjct: 1177 ELIHNSCVSAMQEYEEQLK-ENASEGKGPGKKRGPTI-KISGVQVNVKSIIQHEEEFEML 1234
Query: 923 RVLSYLKPSNWSKGC 937
+ P K C
Sbjct: 1235 HKSIPVDPEEKKKYC 1249
Score = 217 (81.4 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 95/354 (26%), Positives = 156/354 (44%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQ 809
+ PR +TK A+ N+ + + K+ Q + + E P G
Sbjct: 1071 MLPRIRSSTKK-AQTNDSDSDTESKR-----QAQRSSASESETDESDDDKKPKRRGRPRS 1124
Query: 810 VRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDA---GGAVATAPQ--EVVVELFD 863
VR + + RF +A KFG ++ IARDA +VA + E++
Sbjct: 1125 VRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCV 1184
Query: 864 ILIDGCREAVEVGSPDPKGP-----PLLDFFGVSVKANDLINRVEELQLLAKRISRYEDP 918
+ E ++ + + KGP P + GV V +I EE ++L K I +
Sbjct: 1185 SAMQEYEEQLKENASEGKGPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEE 1244
Query: 919 IKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLT-KKIAPV 977
K++ + +K +++ W DD+RLLLGI+ HG+GNWE I+ D L LT KKI PV
Sbjct: 1245 KKKYCLTCRVKAAHFD--VEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKKILPV 1302
Query: 978 ELQHHETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXRKAS---KKGREKSENILNM 1034
E P+ L+ RA+ LL++ L +A +K R K EN
Sbjct: 1303 ETDKK----PQGKQLQTRADYLLKL-LRKSLEKEGAVTGGEEAKLKKRKPRVKKEN--KA 1355
Query: 1035 PISRLKRDKKG-KPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQ 1087
P RLK D+ G + S + + +++ K +E+ K++ + +N+E E+
Sbjct: 1356 P--RLK-DEHGIEFSSPRHSDNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEK 1406
Score = 83 (34.3 bits), Expect = 2.7e-191, Sum P(2) = 2.7e-191
Identities = 33/111 (29%), Positives = 49/111 (44%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMR-LWNYVSTFSNLSGEKLHQIYS--- 1213
L RN L IG RI + + + ++ + ++ R LW +VS F+ KLH++Y
Sbjct: 1502 LEHTRNCLLKIGDRIAECLKAYSDQ--EHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAH 1559
Query: 1214 -KLKQERQEEA----GIGPSH-INGSASGSIDNDLNFSTFNRH-AERQKGH 1257
K QE +E+ IG ASGS + L + H QK H
Sbjct: 1560 KKRSQEEEEQKKKDDAIGGKKPFRPEASGSSRDSLMSQSHTPHNLHPQKPH 1610
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 1789 (634.8 bits), Expect = 9.1e-191, Sum P(2) = 9.1e-191
Identities = 421/975 (43%), Positives = 572/975 (58%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQN--LSGFKKVLNYAKKVVEDVRFRKMV 62
FD+E D +E+++LIKWKG S++H W+S LQ + G KK+ N+ KK E ++ V
Sbjct: 296 FDTEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKV 355
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVT----------------QE 106
S E++E + +E+ ++ KQ VER+IA + SK + G E
Sbjct: 356 SPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPDEIAHSRKPAPSNEPE 415
Query: 107 YLVKWKGLSYAEATWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKL 165
YL KW GL Y+E +WE + +I Q ID + +R + + + + K + L
Sbjct: 416 YLCKWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTR--ECKALKQRPRFVAL 473
Query: 166 DEQPEWLRGG--KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 223
+QP +L G +LRDYQLEGLN+L +SW +VILADEMGLGKT+Q++S L +L +
Sbjct: 474 KKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 533
Query: 224 QIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIK 283
Q+ GPFL+VVPLSTL++W +EF W P +NV+VY+G SR ++YE+ + + + +K
Sbjct: 534 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQT--KRLK 591
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 343
FN L+TTYE++LKDK VL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTP
Sbjct: 592 FNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTP 651
Query: 344 LQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDV 403
LQNS++ELW+LLHF+ +KF+ +DF +++ EN +LH L P +LRR+ KDV
Sbjct: 652 LQNSLKELWSLLHFIMPEKFEFWEDFEEDH---GKGRENGYQSLHKVLEPFLLRRVKKDV 708
Query: 404 EKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHP 463
EKSLP K+E+ILRVEMS LQKQYYKWIL RN+ L KG RG+ LNIV+ELKKCCNH
Sbjct: 709 EKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHC 768
Query: 464 FLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLD 523
+L + + + N L +I SSGKL++LDKLL RL E +RVLIFSQMVRMLD
Sbjct: 769 YLIKPPEE----NERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLD 824
Query: 524 ILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADT 583
ILAEY++ K + FQRLDGS K E+R QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADT
Sbjct: 825 ILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADT 884
Query: 584 VIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
V+IFDSDWNPQNDLQA +RAHRIGQ++ VNIYR VT +VEE+I+ERAKKKMVLDHLVIQ
Sbjct: 885 VVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 944
Query: 644 KLNAEG------SWRRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXX 695
+++ G + R N EL+AIL+FGAE+LFKE +E + MDID
Sbjct: 945 RMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQE---MDIDEI 1001
Query: 696 XXXXXXXXXXXXXXXXXXXXXSAFKVANFCGAEDDGSFWSRWIKP-EAVAQAEDALAPRA 754
S FKVANF ED+ R K + + E
Sbjct: 1002 LRLAETRENEVSTSATDELL-SQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEE 1060
Query: 755 ARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFID---------- 804
K E R KK ++ + +R+A+ S S D
Sbjct: 1061 EERQKELEEIYMLPRIRSSTKK-AQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKR 1119
Query: 805 -GASAQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELF 862
G VR + + RF +A KFG ++ IARDA V + ++ L
Sbjct: 1120 RGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAE-LVDKSVADLK-RLG 1177
Query: 863 DILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQF 922
+++ + C A++ K + G K I ++ +Q+ K I ++E+ +
Sbjct: 1178 ELIHNSCVSAMQEYEEQLK-ENASEGKGPGKKRGPTI-KISGVQVNVKSIIQHEEEFEML 1235
Query: 923 RVLSYLKPSNWSKGC 937
+ P K C
Sbjct: 1236 HKSIPVDPEEKKKYC 1250
Score = 213 (80.0 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 92/353 (26%), Positives = 154/353 (43%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQ 809
+ PR +TK A+ N+ + + K+ Q + + + P G
Sbjct: 1072 MLPRIRSSTKK-AQTNDSDSDTESKR-----QAQRSSASESETDDSDDDKKPKRRGRPRS 1125
Query: 810 VRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDA---GGAVATAPQ--EVVVELFD 863
VR + + RF +A KFG ++ IARDA +VA + E++
Sbjct: 1126 VRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCV 1185
Query: 864 ILIDGCREAVEVGSPDPKGP-----PLLDFFGVSVKANDLINRVEELQLLAKRISRYEDP 918
+ E ++ + + KGP P + GV V +I EE ++L K I +
Sbjct: 1186 SAMQEYEEQLKENASEGKGPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEE 1245
Query: 919 IKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLT-KKIAPV 977
K++ + +K +++ W DD+RLLLGI+ HG+GNWE I+ D L LT KKI PV
Sbjct: 1246 KKKYCLTCRVKAAHFD--VEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKKILPV 1303
Query: 978 ELQHHETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXRKAS---KKGREKSENILNM 1034
E P+ L+ RA+ LL++ L +A +K R K EN
Sbjct: 1304 ETDKK----PQGKQLQTRADYLLKL-LRKSLEKKGAVTGGEEAKLKKRKPRVKKEN--KE 1356
Query: 1035 PISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQ 1087
P RLK + + S + + +++ K +E+ K++ + +N+E E+
Sbjct: 1357 P--RLKDEHGVEFSSPRHSDNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEK 1407
Score = 82 (33.9 bits), Expect = 9.1e-191, Sum P(2) = 9.1e-191
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMR-LWNYVSTFSNLSGEKLHQIYSKLK 1216
L RN L IG RI + + + ++ + ++ R LW +VS F+ KLH++Y
Sbjct: 1503 LEHTRNCLLKIGDRIAECLKAYSDQ--EHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAH 1560
Query: 1217 QERQEE 1222
++R +E
Sbjct: 1561 KKRSQE 1566
Score = 59 (25.8 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 82 KQNSQ-VERIIADRISKD-SSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKA 139
+ NS+ +E+++ R+ K ++G T Y ++ G + EKDE Q I ++K
Sbjct: 257 QDNSETIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEKDE--SEVQYLI-KWKG 313
Query: 140 REAAMA--EQGKMVDLQRKKGKASL----RKLDEQPEWLRGGKLRDYQLEGLN 186
+ E + + Q+ KG L +K DE +WL GK+ +E N
Sbjct: 314 WSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWL--GKVSPEDVEYFN 364
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 1784 (633.1 bits), Expect = 6.4e-190, Sum P(2) = 6.4e-190
Identities = 422/975 (43%), Positives = 570/975 (58%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQN--LSGFKKVLNYAKKVVEDVRFRKMV 62
FD E D E+++LIKWKG S++H W+S LQ + G KK+ N+ KK E ++ V
Sbjct: 275 FDPEKDEGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKV 334
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISK------DSSGNVTQ----------E 106
S E++E + +E+ ++ KQ VER+IA + SK D G + E
Sbjct: 335 SPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPGEIAHSRKPAPSNEPE 394
Query: 107 YLVKWKGLSYAEATWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKL 165
YL KW GL Y+E +WE + +I Q ID + +R + + + + K + L
Sbjct: 395 YLCKWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTR--ECKALKQRPRFVAL 452
Query: 166 DEQPEWLRGG--KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 223
+QP +L G +LRDYQLEGLN+L +SW +VILADEMGLGKT+Q++S L +L +
Sbjct: 453 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 512
Query: 224 QIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIK 283
Q+ GPFL+VVPLSTL++W +EF W P +NV+VY+G SR ++YE+ + + + +K
Sbjct: 513 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQT--KRLK 570
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 343
FN L+TTYE++LKDK VL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTP
Sbjct: 571 FNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 630
Query: 344 LQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDV 403
LQNS++ELW+LLHF+ +KF+ +DF +++ EN +LH L P +LRR+ KDV
Sbjct: 631 LQNSLKELWSLLHFIMPEKFEFWEDFEEDH---GKGRENGYQSLHKVLEPFLLRRVKKDV 687
Query: 404 EKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHP 463
EKSLP K+E+ILRVEMS LQKQYYKWIL RN+ L KG RG+ LNIV+ELKKCCNH
Sbjct: 688 EKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHC 747
Query: 464 FLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLD 523
L + + + N L +I SSGKL++LDKLL RL E +RVLIFSQMVRMLD
Sbjct: 748 HLIKPPEE----NERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLD 803
Query: 524 ILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADT 583
ILAEY++ K + FQRLDGS K E+R QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADT
Sbjct: 804 ILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADT 863
Query: 584 VIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
V+IFDSDWNPQNDLQA +RAHRIGQ++ VNIYR VT +VEE+I+ERAKKKMVLDHLVIQ
Sbjct: 864 VVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 923
Query: 644 KLNAEG------SWRRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXX 695
+++ G + R N EL+AIL+FGAE+LFKE +E + MDID
Sbjct: 924 RMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQE---MDIDEI 980
Query: 696 XXXXXXXXXXXXXXXXXXXXXSAFKVANFCGAEDDGSFWSRWIKP-EAVAQAEDALAPRA 754
S FKVANF ED+ R K + + E
Sbjct: 981 LRLAETRENEVSTSATDELL-SQFKVANFATMEDEEELDERPHKDWDEIIPEEQRKKVEE 1039
Query: 755 ARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFID---------- 804
K E R KK ++ + +R+A+ S S D
Sbjct: 1040 EERQKELEEIYMLPRIRSSTKK-AQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKR 1098
Query: 805 -GASAQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELF 862
G VR + + RF +A KFG ++ IARDA V + ++ L
Sbjct: 1099 RGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAE-LVDKSVADLK-RLG 1156
Query: 863 DILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQF 922
+++ + C A++ K + G K I ++ +Q+ K I ++E+ +
Sbjct: 1157 ELIHNSCVSAMQEYEEQLK-ENASEGKGPGKKRGPTI-KISGVQVNVKSIIQHEEEFEML 1214
Query: 923 RVLSYLKPSNWSKGC 937
+ P K C
Sbjct: 1215 HKSIPVDPEEKKKYC 1229
Score = 215 (80.7 bits), Expect = 5.0e-16, Sum P(3) = 5.0e-16
Identities = 90/353 (25%), Positives = 155/353 (43%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQ 809
+ PR +TK A+ N+ + + K+ Q + + + P G
Sbjct: 1051 MLPRIRSSTKK-AQTNDSDSDTESKR-----QAQRSSASESETDDSDDDKKPKRRGRPRS 1104
Query: 810 VRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDA---GGAVATAPQ--EVVVELFD 863
VR + + RF +A KFG ++ IARDA +VA + E++
Sbjct: 1105 VRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCV 1164
Query: 864 ILIDGCREAVEVGSPDPKGP-----PLLDFFGVSVKANDLINRVEELQLLAKRISRYEDP 918
+ E ++ + + KGP P + GV V +I EE ++L K I +
Sbjct: 1165 SAMQEYEEQLKENASEGKGPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEE 1224
Query: 919 IKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLT-KKIAPV 977
K++ + +K +++ W DD+RLLLGI+ HG+GNWE I+ D L LT KKI PV
Sbjct: 1225 KKKYCLSCRVKAAHFD--VEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKKILPV 1282
Query: 978 ELQHHETFLPRAPNLKERANALLEM--ELXXXXXXXXXXXXXRKASKKGREKSENILNMP 1035
E P+ L+ RA+ LL++ + + +K R K EN P
Sbjct: 1283 ETDKK----PQGKQLQTRADYLLKLLRKSLEKEGAVTGGEEAKLTKRKPRVKKEN--KAP 1336
Query: 1036 ISRLKRDKKG-KPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQ 1087
+ +D+ G + S + + +++ K +E+ TK++ + +N+E E+
Sbjct: 1337 L----KDEHGIEFSSPRHSDNPSEEGEVKDDGLEKSPTKKKQKKKENKENKEK 1385
Score = 79 (32.9 bits), Expect = 6.4e-190, Sum P(2) = 6.4e-190
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMR-LWNYVSTFSNLSGEKLHQIYSKLK 1216
L R+ L IG RI + + + ++ + ++ R LW +VS F+ KLH++Y
Sbjct: 1481 LEHTRSCLLKIGDRIAECLKAYSDQ--EHTKLWRRNLWIFVSKFTEFDARKLHKLYKMAH 1538
Query: 1217 QERQEE 1222
++R +E
Sbjct: 1539 KKRSQE 1544
Score = 59 (25.8 bits), Expect = 5.0e-16, Sum P(3) = 5.0e-16
Identities = 32/117 (27%), Positives = 55/117 (47%)
Query: 78 LDIIKQNSQ-VERIIADRISKD-SSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAID 135
+D + NS+ +E+++ R+ K ++G T Y V+ G ++ EKDE Q I
Sbjct: 232 VDEQQDNSETIEKVLDSRLGKKGATGASTTVYAVEANGDPSSDFDPEKDE--GEVQYLI- 288
Query: 136 EYKAREAAMA--EQGKMVDLQRKKGKASL----RKLDEQPEWLRGGKLRDYQLEGLN 186
++K + E + + Q+ KG L +K DE +WL GK+ +E N
Sbjct: 289 KWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWL--GKVSPEDVEYFN 343
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 1821 (646.1 bits), Expect = 7.9e-188, P = 7.9e-188
Identities = 419/942 (44%), Positives = 571/942 (60%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + ++++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 305 FERNKEPGDIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNA 364
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ D+ KQ VERIIA K ++G +Y KW+GL Y+E +WE
Sbjct: 365 SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAG--LPDYYCKWQGLPYSECSWE 422
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRG--G-KLR 178
+I Q IDEY +R + K D + K + L +QP ++ G G +LR
Sbjct: 423 DGALISKKFQTCIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQPSYIGGHEGLELR 480
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
DYQL GLN+L +SW + ILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 481 DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL 540
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +E + W MN +VY+G SR + + +E+ + + + +KFN LLTTYE++LKDK
Sbjct: 541 TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT--KRLKFNILLTTYEILLKDK 598
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
A L + W ++ VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+
Sbjct: 599 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 658
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF S +DF + + E A+LH EL P +LRR+ KDVEKSLP K+E+ILR+E
Sbjct: 659 MPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 715
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L + D+ +
Sbjct: 716 MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDN----NEF 771
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQR
Sbjct: 772 YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQR 831
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 832 LDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 891
Query: 599 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSW------R 652
A +RAHRIGQ++ VNIYR VT SVEEDILERAKKKMVLDHLVIQ+++ G
Sbjct: 892 AQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSA 951
Query: 653 RKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
N ELSAIL+FGAEELFKE +E+ + MDID
Sbjct: 952 PSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLS 1008
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANE---- 766
S FKVANF ++D ++PE ++ + + P R E +
Sbjct: 1009 VGDELLSQFKVANFSNMDEDDIE----LEPERNSKNWEEIIPEEQRRRLEEEERQKELEE 1064
Query: 767 ----PERSNKRKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNL 818
P N K+ GSE + + R + ++ S P G + +
Sbjct: 1065 IYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGF 1124
Query: 819 SKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
S + RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1125 SDAEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCVKALKDSS 1182
Query: 878 PDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPI 919
+ G K R+ +Q+ AK + +ED +
Sbjct: 1183 SGTERAG-----GRLGKVKGPTFRISGVQVNAKLVIAHEDEL 1219
Score = 275 (101.9 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 163/682 (23%), Positives = 272/682 (39%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 962 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETHENEPGPLSVGDELLSQFK 1018
Query: 721 VANFCGAEDD---------GSFWSRWIKPEAVAQAEDA----------LAPRAARNTKSY 761
VANF ++D W I E + E+ + PR K
Sbjct: 1019 VANFSNMDEDDIELEPERNSKNWEEIIPEEQRRRLEEEERQKELEEIYMLPRMRNCAKQI 1078
Query: 762 A-EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK 820
+ +E RS R+ GS+ ER KR K ++P R+ G S
Sbjct: 1079 SFNGSEGRRSRSRRYSGSDSDSISER--KRPKKRGRPRTIP---------RENIKG-FSD 1126
Query: 821 RDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD 879
+ RF ++ KFG ++ IARDA + + + L +++ +GC +A++ S
Sbjct: 1127 AEIRRFIKSYKKFGGPLERLDAIARDA--ELVDKSETDLRRLGELVHNGCVKALKDSSSG 1184
Query: 880 P----------KGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK 929
KGP GV V A +I +EL L K I + KQ+ + + K
Sbjct: 1185 TERAGGRLGKVKGPTFR-ISGVQVNAKLVIAHEDELIPLHKSIPSDPEERKQYTIPCHTK 1243
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRA 989
+++ W + DD+ LL+GI+ +G+G+WE I++D L LT KI P + P+A
Sbjct: 1244 AAHFD--IDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKK----PQA 1297
Query: 990 PNLKERANALLEM---ELXXXXXXXXXXXXXRKASKKGREKSENILNMPISR-LKRDKKG 1045
L+ RA+ L+++ +L K K +KS+ + ++ + +K D
Sbjct: 1298 KQLQTRADYLIKLLSRDLAKREAQRLCGAGGSKRRKTRAKKSKAMKSIKVKEEIKSDSSP 1357
Query: 1046 KPGSA------KVNFQT--TKDRFHKPQRVEQPL-TKEEGEMSDNEEVYEQFKEVKWMEW 1096
P K+N +KDR K + P+ GE E E+ + K
Sbjct: 1358 LPSEKSDEDDDKLNDSKPESKDRSKKSVVSDAPVHITASGEPVPIAEESEELDQ-KTFSI 1416
Query: 1097 CEDVMADEIRTLQRLQRLQATSDNLPKEKVASVFPSFCWHIPLYSRIKHLTSLLF-FHFI 1155
C++ M L++L R + +E++ C L H+T L +
Sbjct: 1417 CKERMRPVKAALKQLDRPEKGLSE--REQLEHTRQ--C----LIKIGDHITECLKEYSNP 1468
Query: 1156 QVLSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKL 1215
+ + + R L + + + +LYK + R + ++ N + H I +
Sbjct: 1469 EQIKQWRKNLWIFVSKFTEFDARKLHKLYKH-AIKKRQESQQNSDQNSNVATTHVIRNP- 1526
Query: 1216 KQERQEEAGIGPSHINGSASGSIDNDLNFSTFN-RHAERQKGHKNVSTYQMTEPIHKGID 1274
ER +E +H + S+ S +D + S ++ H +R +G + P +
Sbjct: 1527 DMERLKE---NTNH-DDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSN 1582
Query: 1275 PKKFEAWKRRRRAETDMYSQAQ 1296
K W R+ ++ YS +
Sbjct: 1583 GKDHREWDHYRQ-DSRYYSDRE 1603
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 1772 (628.8 bits), Expect = 5.9e-187, Sum P(2) = 5.9e-187
Identities = 452/1154 (39%), Positives = 644/1154 (55%)
Query: 6 DSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK-VVEDVRFRK--MV 62
D +P + ++LIKW+ SHLH W+ ++ L ++ G+KKV NY K+ ++ D R+
Sbjct: 223 DDDPK-SSYQYLIKWQEVSHLHNTWEDYSTLSSVRGYKKVDNYIKQNIIYDREIREDPTT 281
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
+ E+IE D+ +E + ++ VERI+A +++ EY VKW+ L Y TWE
Sbjct: 282 TFEDIEALDIERERKNMLFEEYKIVERIVASETNEEGK----TEYFVKWRQLPYDNCTWE 337
Query: 123 KDEII-DFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQ 181
++I A + + ++ RE + K V + RKL++QP +++GG++RD+Q
Sbjct: 338 DADVIYSMAPNEVYQFLQRENSPYLPYKGVFYNTRP---PYRKLEKQPSYIKGGEIRDFQ 394
Query: 182 LEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNW 241
L G+N++ W + N ILADEMGLGKTVQ+V L +L ++ + GPFL+VVPLST+ W
Sbjct: 395 LTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPLSTVPAW 454
Query: 242 AKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVL 301
+ W P +N I Y G SR ++YEFY R +KFN LLTTYE +LKDK L
Sbjct: 455 QETLANWTPDLNSICYTGNTESRANIREYEFYLSTN-SRKLKFNILLTTYEYILKDKQEL 513
Query: 302 SKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHD 361
+ I+W YL +DEAHRLKNSE+ LY TLS+F T N+LLITGTPLQN+++EL +L++FL
Sbjct: 514 NNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVNFLMPG 573
Query: 362 KFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSP 421
KF +D+ N+ ++ E ++ +L L+P ILRR+ KDVEKSLP K ERILRVE+S
Sbjct: 574 KFYIRDEL--NFDQPNAEQERDIRDLQERLQPFILRRLKKDVEKSLPSKSERILRVELSD 631
Query: 422 LQKQYYKWILERNFHDLNKGVRGN-QVSLLNIVVELKKCCNHPFLFESADHGYGGDTSIN 480
+Q ++YK IL +N+ L G Q+SLLNIVVELKK NHP+LF A + +
Sbjct: 632 MQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMT 691
Query: 481 DTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLD 540
L II++SGK+V+LDKLL RL HRVLIFSQMVRML+IL EYMS +G+ +QRLD
Sbjct: 692 REDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLD 751
Query: 541 GSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAM 600
G+ A +R ++DHFNAP S DF FLLSTRAGGLGINL TADTVIIFDSDWNPQ DLQAM
Sbjct: 752 GTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAM 811
Query: 601 SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQR-KG 659
+RAHRIGQ+ VN+YRF++ +VEEDILERA++KM+L++ +I E S K +
Sbjct: 812 ARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYAIISLGVTEKSKNSKNDKYDA 871
Query: 660 NELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAF 719
ELSAIL+FGA +FK N ++ + L DI F
Sbjct: 872 QELSAILKFGASNMFKATENQKKLENMNLD-DILSHAEDRDSSNDVGGASMGGEEFLKQF 930
Query: 720 KVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSE 779
+V ++ AED W I E + + E+ AA+ K E ER + +++ E
Sbjct: 931 EVTDY-KAEDLN--WDDIIPEEEMERIEEEERMLAAQRAKE----EERERREEEERENDE 983
Query: 780 LQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGN-QSQ 838
P R +KR + S+ Q R+ + +++ YRA++KFG +
Sbjct: 984 -DHPS-RTYKR-----TTKSIT----KRQQRREEM---VREKEIRLLYRAMIKFGLVDER 1029
Query: 839 ISLIARDAGGAVATAPQEVVVELFDILIDGCREAVE-VGSPDPKGP-P----LLDFFGV- 891
I ++A AT P+ + D ++ C EAVE +G+ D K P L++F GV
Sbjct: 1030 FDTIVKEAE-LQATDPKRIYSLSAD-MVKACDEAVERLGADDTKNKQPRKAILIEFKGVK 1087
Query: 892 SVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGI 951
++ A + RV++L L R + DP+KQ ++ Y S S C W +D+ LL GI
Sbjct: 1088 NINAETVTLRVKDLTHL-HRAYKGLDPLKQ--IIGYPIRSVHSWNCSWGIKEDSMLLAGI 1144
Query: 952 HYHGFGNWENIRLDERLGLTKKIAPVELQHHET--FLPRAPNLKERANALLEM--ELXXX 1007
+ HGFG W+ I+ D LGL KI E ++ + ++P A +L R LL + E
Sbjct: 1145 NKHGFGCWQAIKNDPDLGLHDKIFLDEAKNDKESRYVPSAVHLVRRGEYLLSVVREHPDL 1204
Query: 1008 XXXXXXXXXXRKASKKGREKS---ENILNMPISRLK---RDKKGKPGSAKVNFQTT---- 1057
RK ++K KS + L+ IS K R KK K +T+
Sbjct: 1205 FVVKTDQPTKRKYNRKAPTKSSTRQTTLDGSISNTKKSSRTKKKKEEETNRGDETSPEGT 1264
Query: 1058 --KDRFHK-PQRVEQP---LTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRL 1111
+D + P++ E P L G+ + N+ + + TL +
Sbjct: 1265 VGEDEVEEEPRQAEPPKRALRSNSGKAASNKRTTRNSMKTH----------SAMDTLTAV 1314
Query: 1112 QRLQATSDNLPKEK 1125
L A DN+ EK
Sbjct: 1315 AALDAELDNMSNEK 1328
Score = 63 (27.2 bits), Expect = 5.9e-187, Sum P(2) = 5.9e-187
Identities = 23/81 (28%), Positives = 40/81 (49%)
Query: 44 KVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMD--LDIIKQNSQVERIIADRISKDSSG 101
K +NY ++ D F EE+E V +E + +D + + R AD ++D
Sbjct: 177 KSVNYNEQEFYD-DFED--EEEEVE-EQVEEEYEPIIDFVLNH----RKRAD--AQDDDP 226
Query: 102 NVTQEYLVKWKGLSYAEATWE 122
+ +YL+KW+ +S+ TWE
Sbjct: 227 KSSYQYLIKWQEVSHLHNTWE 247
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 1808 (641.5 bits), Expect = 1.9e-186, P = 1.9e-186
Identities = 428/965 (44%), Positives = 570/965 (59%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
FD E + E +FLIKWKG S++H W+S L Q + G KK+ N+ KK E + K
Sbjct: 305 FDPEKEEGETQFLIKWKGWSYIHNTWESVDSLTQQKVKGMKKLENFKKKNEELNAWLKKA 364
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQ---------EYLVKWKG 113
S E++E + +E+ D+ KQ +ER+IA R K + + T EYL KW G
Sbjct: 365 SPEDLEYYNCQQELTNDLSKQFQIIERVIATRTGKSQATSDTPSHKSSSGEPEYLCKWMG 424
Query: 114 LSYAEATWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWL 172
L YAE TWE +I Q ID + R ++ K D + K + L +QP ++
Sbjct: 425 LPYAECTWEDSALIKKKFQACIDSFHNRNSSKTVPSK--DCKVLKQRPRFVPLKKQPSYI 482
Query: 173 --RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFL 230
+LRDYQL+G+N+L +SW +VILADEMGLGKT+Q++S L +L + Q+ GPF+
Sbjct: 483 GDENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFI 542
Query: 231 VVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTT 290
VVVPLSTL++W +EF W P MNV+VY+G SR+ + YE+ N + + IKFN LLTT
Sbjct: 543 VVVPLSTLTSWQREFDTWAPDMNVVVYLGDVTSRKTIRDYEWINPQT--KRIKFNALLTT 600
Query: 291 YEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEE 350
YE++LKDK VL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++E
Sbjct: 601 YEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKE 660
Query: 351 LWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPK 410
LW+LLHFL DKF+S +DF + +N +LH L P +LRR+ KDVEKSLP K
Sbjct: 661 LWSLLHFLMSDKFESWEDFEDEH---GKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAK 717
Query: 411 IERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESAD 470
+E+ILRV+MS QKQ+YKWIL RNF L+KG RG+ LNIV+ELKKCCNH FL + +
Sbjct: 718 VEQILRVDMSAQQKQFYKWILTRNFKALSKGTRGSSSGFLNIVMELKKCCNHAFLIKQPE 777
Query: 471 HGYGGDTSINDTSK--LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEY 528
G ND + L+ ++ GKLV+LDKLL RL + +RVLIFSQMVRMLDILA+Y
Sbjct: 778 DGE------NDAPQEHLQSLVRGGGKLVLLDKLLTRLKDRGNRVLIFSQMVRMLDILADY 831
Query: 529 MSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFD 588
+S K +QFQRLDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFD
Sbjct: 832 LSMKRYQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFD 891
Query: 589 SDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAE 648
SDWNPQNDLQA +RAHRIGQ++ VNIYR VT +VEEDI+ERAKKKMVLDHLVIQ+++
Sbjct: 892 SDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTT 951
Query: 649 G------SWRRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXX 700
G S N ELSAIL+FGAE+LFKE +E + MDID
Sbjct: 952 GRTVLDNSSANSNSNPFNKEELSAILKFGAEDLFKEAEGEESEPQE---MDIDEILRLAE 1008
Query: 701 XXXXXXXXXXXXXXXXSAFKVANFCGAE-----DD--GSFWSRWIKPEAVAQAEDALAPR 753
S FKVANF E D+ G W I E + E+ +
Sbjct: 1009 TRESDQGSSATDELL-SQFKVANFTMDESTPDLDEKPGRDWDEIIPEEQRRKVEEEQKQK 1067
Query: 754 AARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDG-----ASA 808
+ + SNK+ + + ++ R S D
Sbjct: 1068 EMEDIYMLPRSRS---SNKKAQANDSDSDVGSKLKHRSSGSDSETDDSEDDKRPKRRGRP 1124
Query: 809 QVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILID 867
+ R + + + RF +A KFG ++ IARD+ V + ++ L +++ +
Sbjct: 1125 RARKNNVEGFTDAEIRRFIKAYKKFGAPLERLEAIARDSE-LVEKSIADLK-RLGELVHN 1182
Query: 868 GCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSY 927
C AV+ K P+ + G K + ++ +Q+ AK I ++E+ +F L
Sbjct: 1183 SCVTAVQEHEEHLKENPV-EAKGPG-KRRGINIKISGVQVNAKSIIQHEE---EFEPLHK 1237
Query: 928 LKPSN 932
PSN
Sbjct: 1238 AVPSN 1242
Score = 204 (76.9 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 121/510 (23%), Positives = 211/510 (41%)
Query: 745 QAEDA-LAPRAARNTKSYAEANEPERSN----KRKKKGSELQEPQERVHKRRKAEFSVPS 799
+ ED + PR+ R++ A+AN+ + K + GS+ + KR K
Sbjct: 1068 EMEDIYMLPRS-RSSNKKAQANDSDSDVGSKLKHRSSGSDSETDDSEDDKRPKRR----- 1121
Query: 800 VPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVV 858
+ R + + + RF +A KFG ++ IARD+ V + ++
Sbjct: 1122 ------GRPRARKNNVEGFTDAEIRRFIKAYKKFGAPLERLEAIARDSE-LVEKSIADLK 1174
Query: 859 VELFDILIDGCREAVEVG------SP-DPKGPPL-----LDFFGVSVKANDLINRVEELQ 906
L +++ + C AV+ +P + KGP + GV V A +I EE +
Sbjct: 1175 -RLGELVHNSCVTAVQEHEEHLKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFE 1233
Query: 907 LLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDE 966
L K + +F++ +K ++ W+ DD +LLLGI+ HG+GNW+ I+ D
Sbjct: 1234 PLHKAVPSNPAERNKFQLTCRVKTPHFD--VDWDIHDDTQLLLGIYEHGYGNWDLIKTDP 1291
Query: 967 RLGLTKKIAPVELQHHETFLPRAPNLKERANALLEM---ELXXXXXXXXXXX---XXRKA 1020
L L++KI L E P+ L+ R + LL+M +L RK
Sbjct: 1292 DLKLSEKIL---LDDPEK-KPQGKQLQMRTDYLLKMLKKDLESQDAIKAGDEPKIKKRKP 1347
Query: 1021 SKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSD 1080
K + S ++N S D + G K + K K Q+ + KE+
Sbjct: 1348 RMKKKAPSNELVNEIASPRLSDNPSEEGEVKDD-GAEKTPTKKKQKKDNKENKEKTGTPK 1406
Query: 1081 NEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLP----KEKVASVFPSFCWH 1136
E+ ++ K+ + + A + + Q + S+ +P +++ S C
Sbjct: 1407 KEKEGDKDKKRSKPKKEKAKPAGKGKKAQGPVHITQGSEPIPIGEEDDELDQETFSICKE 1466
Query: 1137 I--PLYSRIKHLTSLLFFHFIQ-VLSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMR 1192
P+ +K L +Q L R L IG RI + + + + E K R
Sbjct: 1467 RMRPVKKALKQLDKPDEGLSVQDQLQHTRTCLLKIGDRITECLKSYSDPEHIKIWRRN-- 1524
Query: 1193 LWNYVSTFSNLSGEKLHQIYSKLKQERQEE 1222
LW +VS F+ +KLH++Y K +++R +E
Sbjct: 1525 LWIFVSKFTEFGAQKLHRLYKKAQKKRSQE 1554
Score = 38 (18.4 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 530 SYKGFQFQRLDGSTKAELRH 549
S G Q + GS KA+ RH
Sbjct: 33 SESGSQSESEQGSEKAQSRH 52
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 1795 (636.9 bits), Expect = 4.5e-185, P = 4.5e-185
Identities = 421/972 (43%), Positives = 572/972 (58%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQN--LSGFKKVLNYAKKVVEDVRFRKMV 62
FD+E D +E+++LIKWKG S++H W+S LQ + G KK+ N+ KK E ++ V
Sbjct: 296 FDTEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKV 355
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVT-------------QEYLV 109
S E++E + +E+ ++ KQ VER+IA + SK + G EYL
Sbjct: 356 SPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLC 415
Query: 110 KWKGLSYAEATWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQ 168
KW GL Y+E +WE + +I Q ID + +R + + + + K + L +Q
Sbjct: 416 KWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTR--ECKALKQRPRFVALKKQ 473
Query: 169 PEWLRGG--KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIP 226
P +L G +LRDYQLEGLN+L +SW +VILADEMGLGKT+Q++S L +L + Q+
Sbjct: 474 PTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY 533
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNT 286
GPFL+VVPLSTL++W +EF W P +NV+VY+G SR ++YE+ + + + +KFN
Sbjct: 534 GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQT--KRLKFNA 591
Query: 287 LLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQN 346
L+TTYE++LKDK VL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTPLQN
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQN 651
Query: 347 SVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKS 406
S++ELW+LLHF+ +KF+ +DF +++ EN +LH L P +LRR+ KDVEKS
Sbjct: 652 SLKELWSLLHFIMPEKFEFWEDFEEDH---GKGRENGYQSLHKVLEPFLLRRVKKDVEKS 708
Query: 407 LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLF 466
LP K+E+ILRVEMS LQKQYYKWIL RN+ L KG RG+ LNIV+ELKKCCNH +L
Sbjct: 709 LPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLI 768
Query: 467 ESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILA 526
+ + + N L +I SSGKL++LDKLL RL E +RVLIFSQMVRMLDILA
Sbjct: 769 KPPEE----NERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILA 824
Query: 527 EYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVII 586
EY++ K + FQRLDGS K E+R QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+I
Sbjct: 825 EYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVI 884
Query: 587 FDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLN 646
FDSDWNPQNDLQA +RAHRIGQ++ VNIYR VT +VEE+I+ERAKKKMVLDHLVIQ+++
Sbjct: 885 FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMD 944
Query: 647 AEG------SWRRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXX 698
G + R N EL+AIL+FGAE+LFKE +E + MDID
Sbjct: 945 TTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQE---MDIDEILRL 1001
Query: 699 XXXXXXXXXXXXXXXXXXSAFKVANFCGAEDDGSFWSRWIKP-EAVAQAEDALAPRAARN 757
S FKVANF ED+ R K + + E
Sbjct: 1002 AETRENEVSTSATDELL-SQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEER 1060
Query: 758 TKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFID-----------GA 806
K E R KK ++ + +R+A+ S S D G
Sbjct: 1061 QKELEEIYMLPRIRSSTKK-AQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGR 1119
Query: 807 SAQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDIL 865
VR + + RF +A KFG ++ IARDA V + ++ L +++
Sbjct: 1120 PRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAE-LVDKSVADLK-RLGELI 1177
Query: 866 IDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVL 925
+ C A++ K + G K I ++ +Q+ K I ++E+ +
Sbjct: 1178 HNSCVSAMQEYEEQLK-ENASEGKGPGKKRGPTI-KISGVQVNVKSIIQHEEEFEMLHKS 1235
Query: 926 SYLKPSNWSKGC 937
+ P K C
Sbjct: 1236 IPVDPEEKKKYC 1247
Score = 209 (78.6 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 80/295 (27%), Positives = 127/295 (43%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQ 809
+ PR +TK A+ N+ + + K+ Q + + + P G
Sbjct: 1069 MLPRIRSSTKK-AQTNDSDSDTESKR-----QAQRSSASESETDDSDDDKKPKRRGRPRS 1122
Query: 810 VRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDA---GGAVATAPQ--EVVVELFD 863
VR + + RF +A KFG ++ IARDA +VA + E++
Sbjct: 1123 VRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCV 1182
Query: 864 ILIDGCREAVEVGSPDPKGP-----PLLDFFGVSVKANDLINRVEELQLLAKRISRYEDP 918
+ E ++ + + KGP P + GV V +I EE ++L K I +
Sbjct: 1183 SAMQEYEEQLKENASEGKGPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEE 1242
Query: 919 IKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVE 978
K++ + +K +++ W DD+RLLLGI+ HG+GNWE I+ D L LT KI PVE
Sbjct: 1243 KKKYCLTCRVKAAHFD--VEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVE 1300
Query: 979 LQHHETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXRKAS---KKGREKSEN 1030
P+ L+ RA+ LL++ L +A +K R K EN
Sbjct: 1301 TDKK----PQGKQLQTRADYLLKL-LRKSLEKKGAVTGGEEAKLKKRKPRVKKEN 1350
Score = 59 (25.8 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 82 KQNSQ-VERIIADRISKD-SSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKA 139
+ NS+ +E+++ R+ K ++G T Y ++ G + EKDE Q I ++K
Sbjct: 257 QDNSETIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEKDE--SEVQYLI-KWKG 313
Query: 140 REAAMA--EQGKMVDLQRKKGKASL----RKLDEQPEWLRGGKLRDYQLEGLN 186
+ E + + Q+ KG L +K DE +WL GK+ +E N
Sbjct: 314 WSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWL--GKVSPEDVEYFN 364
>UNIPROTKB|F1NP27 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
ArrayExpress:F1NP27 Uniprot:F1NP27
Length = 1803
Score = 1714 (608.4 bits), Expect = 7.6e-185, Sum P(2) = 7.6e-185
Identities = 398/900 (44%), Positives = 542/900 (60%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + E+++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 304 FEKSKELGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNA 363
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ D+ KQ VERIIA K ++G +Y KW+GL Y+E +WE
Sbjct: 364 SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGY--PDYYCKWQGLPYSECSWE 421
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK---LR 178
+I Q IDEY +R + K D + K + L +QP ++ G + LR
Sbjct: 422 DGALIAKKFQARIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQPSYIGGHESLELR 479
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
DYQL GL +L +SW + ILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 480 DYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL 538
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +E + W P MN +VY+G SR + + +E+ + + + +KFN LLTTYE++LKDK
Sbjct: 539 TSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQT--KRLKFNILLTTYEILLKDK 596
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
+ L + W ++ VDEAHRLKN ++ LY TL + T + P +ELW+L HF+
Sbjct: 597 SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDLVTIDS---DTAPSCTIPQELWSL-HFI 652
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF S +DF + + E A+LH EL P +LRR+ KDVEKSLP K+E+ILR+E
Sbjct: 653 MPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 709
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L + D +
Sbjct: 710 MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDD----NEF 765
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQR
Sbjct: 766 YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQR 825
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 826 LDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 885
Query: 599 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSW------R 652
A +RAHRIGQ++ VNIYR VT SVEEDILERAKKKMVLDHLVIQ+++ G
Sbjct: 886 AQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGST 945
Query: 653 RKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
N ELSAIL+FGAEELFKE +E+ + MDID
Sbjct: 946 PSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETRENEPGPLT 1002
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNT----KSYAEANE 766
S FKVANF ++D ++PE ++ + + P + R + E E
Sbjct: 1003 VGDELLSQFKVANFSNMDEDDIE----LEPERNSRNWEEIIPESQRRRIEEEERQKELEE 1058
Query: 767 ----PERSNKRKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNL 818
P N K+ GSE + + R + ++ + P G + +
Sbjct: 1059 IYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSITERKRPKKRGRPRTIPRENIKGF 1118
Query: 819 SKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
S + RF ++ KFG ++ +ARDA + + + L +++ +GC +A++ S
Sbjct: 1119 SDAEIRRFIKSYKKFGGPLERLDAVARDA--ELVDKSETDLRRLGELVHNGCIKALKDNS 1176
Score = 272 (100.8 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 128/458 (27%), Positives = 201/458 (43%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 956 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETRENEPGPLTVGDELLSQFK 1012
Query: 721 VANFCGA-EDDGSFW----SR-W--IKPEA----VAQAEDA-------LAPRAARNTKSY 761
VANF EDD SR W I PE+ + + E + PR K
Sbjct: 1013 VANFSNMDEDDIELEPERNSRNWEEIIPESQRRRIEEEERQKELEEIYMLPRMRNCAKQI 1072
Query: 762 A-EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK 820
+ +E RS R+ GS+ ER KR K ++P R+ G S
Sbjct: 1073 SFNGSEGRRSRSRRYSGSDSDSITER--KRPKKRGRPRTIP---------RENIKG-FSD 1120
Query: 821 RDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD 879
+ RF ++ KFG ++ +ARDA + + + L +++ +GC +A++ S
Sbjct: 1121 AEIRRFIKSYKKFGGPLERLDAVARDA--ELVDKSETDLRRLGELVHNGCIKALKDNSSG 1178
Query: 880 P----------KGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK 929
KGP GV V A +I+ EEL L K I + K++ + + K
Sbjct: 1179 QERAGGRLGKVKGPTFR-ISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTK 1237
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRA 989
+++ W + DD+ LL+GI+ +G+G+WE I++D L LT+KI P + P+A
Sbjct: 1238 AAHFD--IDWGKEDDSNLLVGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKK----PQA 1291
Query: 990 PNLKERANALLEMELXXXXXXXXXXXXXRKASKKGREKSENILN-MPISRLKRDKKG--K 1046
L+ RA+ L+++ L + K R K+ N N M S++K + K
Sbjct: 1292 KQLQTRADYLIKL-LNKDLARKEAQRLAGAGNSK-RRKTRNKKNKMKASKIKEEIKSDSS 1349
Query: 1047 PGSAKVNFQTTKDRFHKPQRVE-QPLTKEEGEMSDNEE 1083
P ++ + + + +K + V + L K+ +NEE
Sbjct: 1350 PQPSEKSDEDDDEEDNKDEIVSVKHLHKKIKTEKENEE 1387
Score = 101 (40.6 bits), Expect = 7.6e-185, Sum P(2) = 7.6e-185
Identities = 56/222 (25%), Positives = 97/222 (43%)
Query: 1022 KKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDN 1081
K+ EK E LKR+KK K ++ + K++ + +V++ T++E E+ +
Sbjct: 1397 KEAEEKRETKEKENKRELKREKKEKEDKKELKEKDNKEK--RENKVKES-TQKEKEVKE- 1452
Query: 1082 EEVYEQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLP----KEKVASVFPSFCWHI 1137
E+ E+K E E + +I L + ATS+ +P E++ S C
Sbjct: 1453 ----EKVNEIK-SENKEK--SKKIPLLDTPVHITATSEPVPISEESEELDQKTFSVCKER 1505
Query: 1138 --PLYSRIKHLTSL-LFFHFIQVLSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMRL 1193
P+ + +K L + L R L IG I + + E+ E KQ R L
Sbjct: 1506 MRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKN--L 1563
Query: 1194 WNYVSTFSNLSGEKLHQIYSKLKQERQEEAGIGPSHINGSAS 1235
W +VS F+ KLH++Y ++RQE +I+ + +
Sbjct: 1564 WIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVN 1605
Score = 46 (21.3 bits), Expect = 5.0e-179, Sum P(2) = 5.0e-179
Identities = 17/89 (19%), Positives = 35/89 (39%)
Query: 1038 RLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWC 1097
R R+KK K ++K+ + D +P EE + V K++K +
Sbjct: 1326 RKTRNKKNKMKASKIKEEIKSDSSPQPSEKSDEDDDEEDNKDEIVSVKHLHKKIKTEKEN 1385
Query: 1098 EDVMADEIRTLQRLQRLQATSDNLPKEKV 1126
E+ +I + + + T + K ++
Sbjct: 1386 EEKPEPDIGIKKEAEEKRETKEKENKREL 1414
Score = 39 (18.8 bits), Expect = 2.7e-178, Sum P(2) = 2.7e-178
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1158 LSKIRN-YLQLIGRRID-QIVLEHEEEL 1183
L K++ ++ G +++ ++V+ HEEEL
Sbjct: 1186 LGKVKGPTFRISGVQVNAKLVISHEEEL 1213
Score = 39 (18.8 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 588 DSDWNPQNDLQAMSRAHRI----GQQEVVNIYRFVTSKSVEED 626
+SD+ P+N +++ RI G++ R + S EED
Sbjct: 177 ESDYEPKNKVKSRKPPSRIKPKSGKKSTGQKKRQLDSSEEEED 219
>UNIPROTKB|F1N8K8 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
Length = 1804
Score = 1709 (606.7 bits), Expect = 2.6e-184, Sum P(2) = 2.6e-184
Identities = 400/901 (44%), Positives = 542/901 (60%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + E+++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 304 FEKSKELGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNA 363
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ D+ KQ VERIIA K ++G +Y KW+GL Y+E +WE
Sbjct: 364 SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGY--PDYYCKWQGLPYSECSWE 421
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK---LR 178
+I Q IDEY +R + K D + K + L +QP ++ G + LR
Sbjct: 422 DGALIAKKFQARIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQPSYIGGHESLELR 479
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
DYQL GL +L +SW + ILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 480 DYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL 538
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +E + W P MN +VY+G SR + + +E+ + + + +KFN LLTTYE++LKDK
Sbjct: 539 TSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQT--KRLKFNILLTTYEILLKDK 596
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
+ L + W ++ VDEAHRLKN ++ LY TL + T + P +ELW LLHF+
Sbjct: 597 SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDLVTIDS---DTAPSCTIPQELW-LLHFI 652
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF S +DF + + E A+LH EL P +LRR+ KDVEKSLP K+E+ILR+E
Sbjct: 653 MPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 709
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L + D +
Sbjct: 710 MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDD----NEF 765
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQR
Sbjct: 766 YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQR 825
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS K ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 826 LDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 885
Query: 599 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSW------R 652
A +RAHRIGQ++ VNIYR VT SVEEDILERAKKKMVLDHLVIQ+++ G
Sbjct: 886 AQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGST 945
Query: 653 RKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
N ELSAIL+FGAEELFKE +E+ + MDID
Sbjct: 946 PSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETRENEPGPLT 1002
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNT----KSYAEANE 766
S FKVANF ++D ++PE ++ + + P + R + E E
Sbjct: 1003 VGDELLSQFKVANFSNMDEDDIE----LEPERNSRNWEEIIPESQRRRIEEEERQKELEE 1058
Query: 767 ----PERSNKRKK---KGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQV-RDWSYGN 817
P N K+ GSE + + R + ++ + P G + R+ G
Sbjct: 1059 IYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSITERKRPKKRGRPRTIPRENIKGF 1118
Query: 818 LSKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVG 876
RF ++ KFG ++ +ARDA + + + L +++ +GC +A++
Sbjct: 1119 SDAEIRRRFIKSYKKFGGPLERLDAVARDA--ELVDKSETDLRRLGELVHNGCIKALKDN 1176
Query: 877 S 877
S
Sbjct: 1177 S 1177
Score = 274 (101.5 bits), Expect = 1.9e-22, Sum P(3) = 1.9e-22
Identities = 126/458 (27%), Positives = 202/458 (44%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 956 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETRENEPGPLTVGDELLSQFK 1012
Query: 721 VANFCGA-EDDGSFW----SR-W--IKPEA----VAQAEDA-------LAPRAARNTKSY 761
VANF EDD SR W I PE+ + + E + PR K
Sbjct: 1013 VANFSNMDEDDIELEPERNSRNWEEIIPESQRRRIEEEERQKELEEIYMLPRMRNCAKQI 1072
Query: 762 A-EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK 820
+ +E RS R+ GS+ ER KR K ++P ++ +S + +
Sbjct: 1073 SFNGSEGRRSRSRRYSGSDSDSITER--KRPKKRGRPRTIP-----RENIKGFSDAEIRR 1125
Query: 821 RDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD 879
R F ++ KFG ++ +ARDA + + + L +++ +GC +A++ S
Sbjct: 1126 R----FIKSYKKFGGPLERLDAVARDA--ELVDKSETDLRRLGELVHNGCIKALKDNSSG 1179
Query: 880 P----------KGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK 929
KGP GV V A +I+ EEL L K I + K++ + + K
Sbjct: 1180 QERAGGRLGKVKGPTFR-ISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTK 1238
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRA 989
+++ W + DD+ LL+GI+ +G+G+WE I++D L LT+KI P + P+A
Sbjct: 1239 AAHFD--IDWGKEDDSNLLVGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKK----PQA 1292
Query: 990 PNLKERANALLEMELXXXXXXXXXXXXXRKASKKGREKSENILN-MPISRLKRDKKG--K 1046
L+ RA+ L+++ L + K R K+ N N M S++K + K
Sbjct: 1293 KQLQTRADYLIKL-LNKDLARKEAQRLAGAGNSK-RRKTRNKKNKMKASKIKEEIKSDSS 1350
Query: 1047 PGSAKVNFQTTKDRFHKPQRVE-QPLTKEEGEMSDNEE 1083
P ++ + + + +K + V + L K+ +NEE
Sbjct: 1351 PQPSEKSDEDDDEEDNKDEIVSVKHLHKKIKTEKENEE 1388
Score = 101 (40.6 bits), Expect = 2.6e-184, Sum P(2) = 2.6e-184
Identities = 56/222 (25%), Positives = 97/222 (43%)
Query: 1022 KKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDN 1081
K+ EK E LKR+KK K ++ + K++ + +V++ T++E E+ +
Sbjct: 1398 KEAEEKRETKEKENKRELKREKKEKEDKKELKEKDNKEK--RENKVKES-TQKEKEVKE- 1453
Query: 1082 EEVYEQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLP----KEKVASVFPSFCWHI 1137
E+ E+K E E + +I L + ATS+ +P E++ S C
Sbjct: 1454 ----EKVNEIK-SENKEK--SKKIPLLDTPVHITATSEPVPISEESEELDQKTFSVCKER 1506
Query: 1138 --PLYSRIKHLTSL-LFFHFIQVLSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMRL 1193
P+ + +K L + L R L IG I + + E+ E KQ R L
Sbjct: 1507 MRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKN--L 1564
Query: 1194 WNYVSTFSNLSGEKLHQIYSKLKQERQEEAGIGPSHINGSAS 1235
W +VS F+ KLH++Y ++RQE +I+ + +
Sbjct: 1565 WIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVN 1606
Score = 46 (21.3 bits), Expect = 1.7e-178, Sum P(2) = 1.7e-178
Identities = 17/89 (19%), Positives = 35/89 (39%)
Query: 1038 RLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWC 1097
R R+KK K ++K+ + D +P EE + V K++K +
Sbjct: 1327 RKTRNKKNKMKASKIKEEIKSDSSPQPSEKSDEDDDEEDNKDEIVSVKHLHKKIKTEKEN 1386
Query: 1098 EDVMADEIRTLQRLQRLQATSDNLPKEKV 1126
E+ +I + + + T + K ++
Sbjct: 1387 EEKPEPDIGIKKEAEEKRETKEKENKREL 1415
Score = 39 (18.8 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1158 LSKIRN-YLQLIGRRID-QIVLEHEEEL 1183
L K++ ++ G +++ ++V+ HEEEL
Sbjct: 1187 LGKVKGPTFRISGVQVNAKLVISHEEEL 1214
Score = 39 (18.8 bits), Expect = 1.9e-22, Sum P(3) = 1.9e-22
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 588 DSDWNPQNDLQAMSRAHRI----GQQEVVNIYRFVTSKSVEED 626
+SD+ P+N +++ RI G++ R + S EED
Sbjct: 177 ESDYEPKNKVKSRKPPSRIKPKSGKKSTGQKKRQLDSSEEEED 219
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 1774 (629.5 bits), Expect = 7.6e-183, P = 7.6e-183
Identities = 381/755 (50%), Positives = 498/755 (65%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQN--LSGFKKVLNYAKKVVEDVRFRKMV 62
FDSE D E+++LIKWKG S++H W+S LQ + G KK+ N+ KK E ++ V
Sbjct: 295 FDSEKDEGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKV 354
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISK------DSSGNVTQ----------E 106
S E++E + +E+ ++ KQ VER+IA + SK D G + E
Sbjct: 355 SPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPGEIAHSRKPAPSNEPE 414
Query: 107 YLVKWKGLSYAEATWEKDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKL 165
YL KW GL Y+E +WE + +I Q ID + +R + + + + K + L
Sbjct: 415 YLCKWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTR--ECKALKQRPRFVAL 472
Query: 166 DEQPEWLRGG--KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 223
+QP +L G +LRDYQLEGLN+L +SW +VILADEMGLGKT+Q++S L +L +
Sbjct: 473 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 532
Query: 224 QIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIK 283
Q+ GPFL+VVPLSTL++W +EF W P +NV+VY+G SR ++YE+ + + + +K
Sbjct: 533 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQT--KRLK 590
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 343
FN L+TTYE++LKDK VL I W +L VDEAHRLKN ++ LY TL +F + ++LLITGTP
Sbjct: 591 FNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 650
Query: 344 LQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDV 403
LQNS++ELW+LLHF+ +KF+ +DF +++ EN +LH L P +LRR+ KDV
Sbjct: 651 LQNSLKELWSLLHFIMPEKFEFWEDFEEDH---GKGRENGYQSLHKVLEPFLLRRVKKDV 707
Query: 404 EKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHP 463
EKSLP K+E+ILRVEMS LQKQYYKWIL RN+ L KG RG+ LNIV+ELKKCCNH
Sbjct: 708 EKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHC 767
Query: 464 FLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLD 523
+L + + + N L +I SSGKL++LDKLL RL E +RVLIFSQMVRMLD
Sbjct: 768 YLIKPPEE----NERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLD 823
Query: 524 ILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADT 583
ILAEY++ K + FQRLDGS K E+R QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADT
Sbjct: 824 ILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADT 883
Query: 584 VIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
V+IFDSDWNPQNDLQA +RAHRIGQ++ VNIYR VT +VEE+I+ERAKKKMVLDHLVIQ
Sbjct: 884 VVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 943
Query: 644 KLNAEG------SWRRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXX 695
+++ G + R N EL+AIL+FGAE+LFKE +E + MDID
Sbjct: 944 RMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQE---MDIDEI 1000
Query: 696 XXXXXXXXXXXXXXXXXXXXXSAFKVANFCGAEDD 730
S FKVANF ED+
Sbjct: 1001 LRLAETRENEVSTSATDELL-SQFKVANFATMEDE 1034
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 1636 (581.0 bits), Expect = 1.0e-182, Sum P(3) = 1.0e-182
Identities = 346/698 (49%), Positives = 464/698 (66%)
Query: 7 SEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVV---EDVRFRKMVS 63
S P + EFLIKW SHLHC W+ + + + G KKV N+ K+V+ ++R +
Sbjct: 208 STPS-EDYEFLIKWVNFSHLHCTWEPYNNISMIRGSKKVDNHIKQVILLDREIREDPTTT 266
Query: 64 REEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEK 123
RE+IE D+ KE + ++ QV+RI+A ++ D G+V EYLVKWK L Y TWE
Sbjct: 267 REDIEAMDIEKERKRENYEEYKQVDRIVAKHLNSD--GSV--EYLVKWKQLLYDFCTWEA 322
Query: 124 DEIID-FAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQL 182
II+ A I ++ RE + + + + K RKL++QP ++ GG+LRD+QL
Sbjct: 323 SSIIEPIAATEIQAFQEREESALSPSRGTNYGNSRPK--YRKLEQQPSYITGGELRDFQL 380
Query: 183 EGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWA 242
G+N++ W + N ILADEMGLGKTVQ+V+ L +L ++ + GPFLVVVPLST+ W
Sbjct: 381 TGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVPLSTVPAWQ 440
Query: 243 KEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLS 302
+ W MN I Y+G SR+V + YEFY D + IKFN LLTTYE VLKD++VLS
Sbjct: 441 ETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGT--QKIKFNLLLTTYEYVLKDRSVLS 498
Query: 303 KIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDK 362
IKW Y+ +DEAHRLKNSE+ LY LS+F N+LLITGTPLQN++ EL AL+ FL K
Sbjct: 499 NIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALVDFLMPGK 558
Query: 363 FKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPL 422
F+ +++ N + E + +L L+P+ILRR+ KDVEKSLP K ERILRVE+S L
Sbjct: 559 FEIREEI--NLEAPDEEQEAYIRSLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDL 616
Query: 423 QKQYYKWILERNFHDLNKGVR-GNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSIND 481
Q +YK IL RN+ L + + G+Q+SLLNIVVELKK NHP+LF+ + + IN
Sbjct: 617 QMYWYKNILTRNYRVLTQSISSGSQISLLNIVVELKKASNHPYLFDGVEESWM--QKINS 674
Query: 482 TSK----LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQ 537
+ L+ +I++SGK+V+LDKLL RL HRVLIFSQMVRMLDIL +Y+S +G+ Q
Sbjct: 675 QGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQ 734
Query: 538 RLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 597
RLDG+ A +R ++DHFNAP S DF FLLSTRAGGLGINL TADTVIIFDSDWNPQ DL
Sbjct: 735 RLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADL 794
Query: 598 QAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQR 657
QAM+RAHRIGQ+ V +YR ++ ++EED+LERA++KM+L++ +I L + K
Sbjct: 795 QAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYAIIS-LGVTDKQKNSKND 853
Query: 658 K--GNELSAILRFGAEELFKEDRNDEESKKRLLGMDID 693
K ELSAIL+FGA +FK + N +K+L M++D
Sbjct: 854 KFSAEELSAILKFGASNMFKAENN----QKKLEDMNLD 887
Score = 137 (53.3 bits), Expect = 1.0e-182, Sum P(3) = 1.0e-182
Identities = 50/193 (25%), Positives = 91/193 (47%)
Query: 818 LSKRDATRFYRAVMKFGN-QSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVG 876
L +++ YRA++++G+ + + + I + A + T V+ ++ L+ R+AV
Sbjct: 995 LLEKEIRLLYRAMIRYGSLEHRYNDIVKYAD--LTTQDAHVIKKIAADLVTASRKAVSAA 1052
Query: 877 SPDPKGPP----------LLDFFGV-SVKANDLINRVEELQLL--AKRISRYEDPIKQFR 923
D L+ F GV ++ A L+ R+ +L +L A S Y + F+
Sbjct: 1053 EKDLSNDQSNNKSSRKALLITFKGVKNINAETLVQRLNDLDILYDAMPTSGYSN----FQ 1108
Query: 924 VLSYLKPSN-WSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHH 982
+ +++ + WS C W +D+ LL GI HGFG W IR D L + KI + +
Sbjct: 1109 IPMHVRSVHGWS--CQWGPREDSMLLSGICKHGFGAWLEIRDDPELKMKDKIFLEDTKQT 1166
Query: 983 ETFLPRAPNLKER 995
+ +P+ KE+
Sbjct: 1167 DNSVPKDKENKEK 1179
Score = 38 (18.4 bits), Expect = 1.0e-182, Sum P(3) = 1.0e-182
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 1246 TFNRHAERQKGHKNVSTYQMTEPIHKGIDPKKFEAWKRRRRAET 1289
T NR RQ G NV + Q E + P E+ K+ +T
Sbjct: 1225 TANR---RQSGKPNVKSAQKIESATRTPSPAISESRKKPSSKDT 1265
Score = 37 (18.1 bits), Expect = 3.5e-172, Sum P(3) = 3.5e-172
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 916 EDPIKQFRVLSYLKPSNW 933
E+ +KQF V Y +W
Sbjct: 910 EEFLKQFEVTDYKADVSW 927
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 1630 (578.8 bits), Expect = 1.1e-181, Sum P(2) = 1.1e-181
Identities = 361/882 (40%), Positives = 526/882 (59%)
Query: 9 PDWNEM----EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK-VVED--VRFRKM 61
PD N EFLIKW +SHLH W+++ + + G K++ NY K+ ++ED VR
Sbjct: 202 PDLNNCKENYEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPY 261
Query: 62 VSREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATW 121
V+ E+IE+ D+ +E LD ++ ERII + + G +YLVKW+ L+Y EATW
Sbjct: 262 VTAEDIEIMDMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATW 321
Query: 122 EK-DEIIDFAQDAIDEYKAREAA--MAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLR 178
E +I+ A + + ++ RE + + + QR + KL QP +++GG+LR
Sbjct: 322 ENATDIVKLAPEQVKHFQNRENSKILPQYSSNYTSQRPR----FEKLSVQPPFIKGGELR 377
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
D+QL G+N++ W N ILADEMGLGKTVQ+V+ + +L A++ GP ++VVPLST+
Sbjct: 378 DFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTM 437
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFY-NDKKVGRP-IKFNTLLTTYEVVLK 296
W F KW P +N I Y+G + SR+ ++YEFY N + G+ +KFN LLTTYE +LK
Sbjct: 438 PAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEYILK 497
Query: 297 DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLH 356
D+A L IKW ++ VDEAHRLKN+E+ LY +L+ F N++LITGTPLQN+++EL AL++
Sbjct: 498 DRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVN 557
Query: 357 FLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILR 416
FL +F + +++N E + +LH ++P ILRR+ KDVEKSLP K ERILR
Sbjct: 558 FLMPGRFTIDQEI--DFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILR 615
Query: 417 VEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGY--- 473
VE+S +Q +YYK IL +N+ L G +G SLLNI+ ELKK NHP+LF++A+
Sbjct: 616 VELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQK 675
Query: 474 GGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKG 533
GD + + L +I+SSGK+V+LD+LL RL + HRVLIFSQMVRMLDIL +Y+S KG
Sbjct: 676 FGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKG 735
Query: 534 FQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNP 593
FQRLDG+ + R ++DHFN+P S DF FLLSTRAGGLGINL TADTV+IFDSDWNP
Sbjct: 736 INFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNP 795
Query: 594 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGS-WR 652
Q DLQAM+RAHRIGQ+ V +YR V+ +VEE++LERA+KKM+L++ +I +G+ +
Sbjct: 796 QADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYT 855
Query: 653 RKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMD-IDXXXXXXXXXXXXXXXXXX 711
+K + ELSAIL+FGA +F D + K L +D +
Sbjct: 856 KKNEPNAGELSAILKFGAGNMFTA--TDNQKKLEDLNLDDVLNHAEDHVTTPDLGESHLG 913
Query: 712 XXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPERSN 771
F+V ++ A+ D W I E + + +D R + Y + + E N
Sbjct: 914 GEEFLKQFEVTDY-KADID---WDDIIPEEELKKLQDE---EQKRKDEEYVK-EQLEMMN 965
Query: 772 KRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVM 831
+R +++ ++ S A+ D ++ + + Y+A++
Sbjct: 966 RRDNALKKIKNSVNGDGTAANSDSDDDSTSRSSRRRARANDMD--SIGESEVRALYKAIL 1023
Query: 832 KFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAV 873
KFGN +I L A G + E E +D +++ ++ V
Sbjct: 1024 KFGNLKEI-LDELIADGTLPVKSFEKYGETYDEMMEAAKDCV 1064
Score = 155 (59.6 bits), Expect = 1.1e-181, Sum P(2) = 1.1e-181
Identities = 39/94 (41%), Positives = 57/94 (60%)
Query: 885 LLDFFGV-SVKANDLINRVEELQLLAKRI-SRY-EDPIKQFRVLSYLKP-SNWSKGCGWN 940
L +F GV S+ A L++RVE+L+ L I S Y +DP+K + KP NWS W
Sbjct: 1119 LFNFKGVKSLNAESLLSRVEDLKYLKNLINSNYKDDPLKFSLGNNTPKPVQNWSSN--WT 1176
Query: 941 QFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
+ +D +LL+G+ +G+G+W IR D LG+T KI
Sbjct: 1177 KEEDEKLLIGVFKYGYGSWTQIRDDPFLGITDKI 1210
Score = 52 (23.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 124 DEIIDFAQDAI-DEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
DE+++ A+D + +E K R+ + + K R K K+ K + QP+
Sbjct: 1054 DEMMEAAKDCVHEEEKNRKEILEKLEKHATAYRAKLKSGEIKAENQPK 1101
Score = 48 (22.0 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 6/33 (18%), Positives = 20/33 (60%)
Query: 8 EPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLS 40
E +++++L+KW+ ++ W++ ++ L+
Sbjct: 299 EDGTSQLQYLVKWRRLNYDEATWENATDIVKLA 331
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 1601 (568.6 bits), Expect = 4.3e-180, Sum P(3) = 4.3e-180
Identities = 332/677 (49%), Positives = 456/677 (67%)
Query: 16 FLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVV---EDVRFRKMVSREEIELNDV 72
F IKW SHLH W+ + +L++ GF+K+ NY K+ + +++R + ++E++E D+
Sbjct: 198 FKIKWTDASHLHNTWEKYQDLKSFKGFRKLDNYIKQFIIYDDEIRNDPLTTKEDLEAMDI 257
Query: 73 SKEMDLDIIKQNSQVERII-ADRISKDSSGNVTQEYLVKWKGLSYAEATWEK-DEIIDFA 130
+E D + + VERI+ ++R+ D G +Y VKWK L Y E +WE +EI A
Sbjct: 258 ERERKRDEQDEYTHVERIVDSERVETDD-GETKLQYFVKWKRLYYDECSWEDAEEIAKIA 316
Query: 131 QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVN 190
+ + +Y+ R + + + + KL +QP +++ G+LRD+QL GLN++
Sbjct: 317 PEQVTKYQQRLNSKILPSLSANYPLSQ-RPRFEKLFKQPVFIKNGELRDFQLTGLNWMAF 375
Query: 191 SWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLP 250
W + N ILADEMGLGKTVQ+V+ L +L A++ GP LVVVPLST+ W + F KW P
Sbjct: 376 LWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHLVVVPLSTVPAWQETFEKWAP 435
Query: 251 TMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLM 310
+N + Y+G +R+ ++YE YN + +P KFN LLTTYE +LKDK L KW +L
Sbjct: 436 DVNCVYYLGNGEARKTIREYELYNQNR--KP-KFNVLLTTYEYILKDKNELGAFKWQFLA 492
Query: 311 VDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFI 370
VDEAHRLKN+E+ LY L F N+LLITGTPLQN+V+EL AL +FL KF +
Sbjct: 493 VDEAHRLKNAESSLYEALKGFKVSNRLLITGTPLQNNVKELAALCNFLMPGKFTIDQEI- 551
Query: 371 QNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWI 430
+++ + S E + +L ++ P ILRR+ KDVEKSLP K ERILRVE+S +Q +YYK I
Sbjct: 552 -DFETIDSEQEQYIKDLQKKISPFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNI 610
Query: 431 LERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGY---GGDTSINDTSKLER 487
+ +N+ LN G RG+Q+SLLNI+ ELKK NHP+LF+ A+ G S +T L+
Sbjct: 611 ITKNYAALNAGNRGSQISLLNIMSELKKASNHPYLFDGAEDKVLDKAGSPSRENT--LKG 668
Query: 488 IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAEL 547
I++SSGK+V+L++LL RL + HRVLIFSQMVRMLDIL +YM KG+QFQRLDG+ +
Sbjct: 669 IVMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSK 728
Query: 548 RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 607
R A+DHFNAPGS+DF FLLSTRAGGLGINL TADTVIIFDSDWNPQ DLQAM+RAHRIG
Sbjct: 729 RKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIG 788
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRR--KKQRKGNELSAI 665
Q+ V++YRFV+ +VEE ILERA+KKMVL++ +I + S + K + NELS I
Sbjct: 789 QKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIISLGITDPSAKNGSKTEPSTNELSQI 848
Query: 666 LRFGAEELFKEDRNDEE 682
L+FGA +FKE+ N ++
Sbjct: 849 LKFGAGTMFKENNNQQK 865
Score = 127 (49.8 bits), Expect = 4.3e-180, Sum P(3) = 4.3e-180
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 872 AVEVGSPDPKGPPLLDFFGV-SVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKP 930
A+ + K L ++ GV ++ A ++NR +++LL K +++ + F + + K
Sbjct: 1073 ALWIAKKKEKKAVLFEYQGVKNINAEIVLNRPVDMKLLEKIVTKTDST--NFVLPRHPKS 1130
Query: 931 SN-WSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
WS C W DDA LL+G++ G+G+W IR D LGL K+
Sbjct: 1131 VQAWS--CEWTAKDDAMLLVGVYKFGYGSWVQIRDDPLLGLQNKL 1173
Score = 61 (26.5 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 39/163 (23%), Positives = 72/163 (44%)
Query: 35 ELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVER----- 89
EL+ S K +NYA ED + E E ++ +E D +Q + E
Sbjct: 118 ELRFSSRNNKQVNYAIDYDED---DADLLESEPEFDEEDEEGDYYYYQQAIEPENERGID 174
Query: 90 IIAD-RISKDSS---GNVTQEYL--VKWKGLSYAEATWEK-DEIIDFAQ-DAIDEYKARE 141
I+ D +++++++ G+ +YL +KW S+ TWEK ++ F +D Y +
Sbjct: 175 IVMDHKLNEENAEKTGDPKIDYLFKIKWTDASHLHNTWEKYQDLKSFKGFRKLDNYIKQF 234
Query: 142 AAMAEQGKMVDLQRKKGKASL-----RKLDEQPEWLRGGKLRD 179
++ + L K+ ++ RK DEQ E+ ++ D
Sbjct: 235 IIYDDEIRNDPLTTKEDLEAMDIERERKRDEQDEYTHVERIVD 277
Score = 58 (25.5 bits), Expect = 4.3e-180, Sum P(3) = 4.3e-180
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 763 EANEPERSNKRKKKGSELQEPQERVHKRRKA---EF----SVPSVPFIDGASAQ-VRDWS 814
E + + KRK LQ+ Q ++ RRKA +F SVPS G ++ +R +
Sbjct: 920 ELTKLKDEEKRKADEQYLQD-QIAMYSRRKAAVRKFENGSSVPSDVEDSGEDSRPLRRRN 978
Query: 815 YGN--LSKRDATRFYRAVMKFGNQS 837
G+ LS+++ YR+++K+G+ S
Sbjct: 979 AGDHQLSEKEIRGIYRSILKWGDLS 1003
Score = 56 (24.8 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 9/51 (17%), Positives = 27/51 (52%)
Query: 2 SHLFDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKV 52
S +++ ++++ +KWK + C W+ E+ ++ ++V Y +++
Sbjct: 278 SERVETDDGETKLQYFVKWKRLYYDECSWEDAEEIAKIAP-EQVTKYQQRL 327
Score = 47 (21.6 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 588 DSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLD 638
+++ NP+ L + R+HR + + V S S EED+ KKK V D
Sbjct: 9 EAELNPE--LYGLRRSHRERRGPAI-----VESDS-EEDVAPSRKKKKVQD 51
>UNIPROTKB|H9L0N0 [details] [associations]
symbol:H9L0N0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02032856 EMBL:AADN02032857
EMBL:AADN02032858 EMBL:AADN02032859 EMBL:AADN02032860
EMBL:AADN02032861 EMBL:AADN02032862 EMBL:AADN02032863
EMBL:AADN02032864 EMBL:AADN02032865 Ensembl:ENSGALT00000023599
Uniprot:H9L0N0
Length = 1444
Score = 1455 (517.2 bits), Expect = 1.0e-172, Sum P(3) = 1.0e-172
Identities = 309/636 (48%), Positives = 420/636 (66%)
Query: 24 SHLHCQWKSFAELQ--NLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMDLDII 81
SH+H W+S L+ N+ G KK+ NY KK E R+ K S E++E + +E D+
Sbjct: 1 SHIHNTWESEETLKQHNVKGMKKLDNYKKKCQETKRWLKNASPEDVEYYNCQQEFTDDLH 60
Query: 82 KQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFA-QDAIDEYKAR 140
KQ VERIIA K ++G +Y KW+GL Y+E +WE +I Q IDEY +R
Sbjct: 61 KQYQVVERIIAHSNQKSAAGY--PDYYCKWQGLPYSECSWEDGALIAKKFQACIDEYFSR 118
Query: 141 EAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGG---KLRDYQLEGLNFLVNSWRNDTN 197
+ K D + K + L +QP ++ G +LRDYQL GLN+L +SW +
Sbjct: 119 NQSKTTPFK--DCKILKQRPRFVALKKQPFYIGGRDCLELRDYQLNGLNWLAHSWCKGNS 176
Query: 198 VILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVY 257
ILADEMGLGKT+Q++S L +L + ++ GPFL+VVPLSTL++W +E + W P MN +VY
Sbjct: 177 CILADEMGLGKTIQTISFLNYLFHEHELYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVY 236
Query: 258 VGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRL 317
+G SR + + +E+ + + + +KFN LLTTYE++LKDK+ L + W ++ +DEAHRL
Sbjct: 237 LGDITSRNMIRTHEWMHPQT--KRLKFNILLTTYEILLKDKSFLGGLNWVFIGIDEAHRL 294
Query: 318 KNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLS 377
KN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+ +KF S +DF + +
Sbjct: 295 KNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGR 354
Query: 378 SFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHD 437
F A+LH EL P +LRR+ KDVEKSLP K+E+ILR+EMS LQKQYYKWIL RN+
Sbjct: 355 EFG---YASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKA 411
Query: 438 LNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVI 497
L+KG +G+ LNI++ELKKCCNH +L + D + N L+ +I SSGKL++
Sbjct: 412 LSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDD----NEFYNKQEALQHLIRSSGKLIL 467
Query: 498 LDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNA 557
LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQRLDGS K ELR QA+DHFNA
Sbjct: 468 LDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNA 527
Query: 558 PGSED----FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVN 613
GSE+ FC+ L+ ++ L +L + I WNP + + A + I ++ VN
Sbjct: 528 EGSENLTSLFCYHLTRKSLTLKTHLRNGHNIDIIAFFWNPCSCINACFLSLNILTKKQVN 587
Query: 614 IYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEG 649
IYR VT SVEEDILERAKKKMVLDHLVIQ+++ G
Sbjct: 588 IYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTG 623
Score = 179 (68.1 bits), Expect = 1.0e-172, Sum P(3) = 1.0e-172
Identities = 69/257 (26%), Positives = 117/257 (45%)
Query: 734 WSRWIKPEAVAQAEDA-LAPRAARNTKSYA-EANEPERSNKRKKKGSELQEPQERVHKRR 791
W R + E + E+ + PR K + NE S R+ GS+ ER KR
Sbjct: 728 WRRIEEEERQKELEEIYMLPRMRNCAKQISFNGNEGRCSRSRRYSGSDSDSISER--KRP 785
Query: 792 KAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDAGGAV 850
K ++P R+ G S + RF ++ KFG ++ IARDA +
Sbjct: 786 KKRGRPRTIP---------RENIKG-FSDAEIRRFIKSYKKFGGPLERLDAIARDA--EL 833
Query: 851 ATAPQEVVVELFDILIDGCREAV---EVGSPDPKGP------PLLDFFGVSVKANDLINR 901
+ + L +++ +GC +A+ + G G P GV V A +I+
Sbjct: 834 VDKSETDLRRLGELVHNGCIKALNDNDFGQGRTGGRFGKVKGPTFRIAGVQVNAKLVISH 893
Query: 902 VEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWEN 961
EEL L K I + K++ + + K +++ W + DD+ LL+GI+ +G+G+WE
Sbjct: 894 EEELAPLHKSIPSDPEERKRYVIPYHTKAAHFD--IDWGKEDDSNLLIGIYEYGYGSWEM 951
Query: 962 IRLDERLGLTKKIAPVE 978
I++D L LT+K+ ++
Sbjct: 952 IKMDPDLSLTQKVCHLQ 968
Score = 82 (33.9 bits), Expect = 1.0e-172, Sum P(3) = 1.0e-172
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 1158 LSKIRNYLQLIGRRIDQIVLEHEE-ELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLK 1216
L R L IG I + + E+ E KQ R LW +VS F+ KLH++Y
Sbjct: 1177 LEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKN--LWIFVSKFTEFDARKLHKLYKHAI 1234
Query: 1217 QERQEEAGIGPSHINGSASGSIDNDLNFSTFNRH 1250
++RQE +I + + + + N + +
Sbjct: 1235 KKRQESQQHSDQNIAANVNTQVIRNPNVESLKEN 1268
Score = 45 (20.9 bits), Expect = 7.7e-11, Sum P(4) = 7.7e-11
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 15 EFLIKWKGQSHLHCQWKSFA 34
++ KW+G + C W+ A
Sbjct: 83 DYYCKWQGLPYSECSWEDGA 102
Score = 40 (19.1 bits), Expect = 7.7e-11, Sum P(4) = 7.7e-11
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 640 LVIQKLNAEGSWRRKKQRKGNELSAILRFG 669
L++ L+ SW+R+ Q +++A++ G
Sbjct: 209 LLVVPLSTLTSWQREIQTWAPQMNAVVYLG 238
Score = 37 (18.1 bits), Expect = 1.1e-150, Sum P(2) = 1.1e-150
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 1166 QLIGRRID-QIVLEHEEEL 1183
++ G +++ ++V+ HEEEL
Sbjct: 879 RIAGVQVNAKLVISHEEEL 897
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 1563 (555.3 bits), Expect = 1.7e-160, P = 1.7e-160
Identities = 321/614 (52%), Positives = 427/614 (69%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAEL--QNLSGFKKVLNYAKKVVEDVRFRKMV 62
F+ + ++++LIKWKG SH+H W++ L QN+ G KK+ NY KK E R+ K
Sbjct: 305 FEKSKEPGDVQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNA 364
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
S E++E + +E+ D+ KQ VERIIA K ++G +Y KW+GL Y+E +WE
Sbjct: 365 SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAG--LPDYYCKWQGLPYSECSWE 422
Query: 123 KDEIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRG--G-KLR 178
+I Q IDEY +R + K D + K + L +QP ++ G G +LR
Sbjct: 423 DGALISKKFQTCIDEYFSRNQSKTTPFK--DCKVLKQRPRFVALKKQPSYIGGHEGLELR 480
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
DYQL GLN+L +SW + ILADEMGLGKT+Q++S L +L + Q+ GPFL+VVPLSTL
Sbjct: 481 DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL 540
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
++W +E + W MN +VY+G SR + + +E+ + + + +KFN LLTTYE++LKDK
Sbjct: 541 TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQT--KRLKFNILLTTYEILLKDK 598
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
A L + W ++ VDEAHRLKN ++ LY TL +F + ++LLITGTPLQNS++ELW+LLHF+
Sbjct: 599 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 658
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+KF S +DF + + E A+LH EL P +LRR+ KDVEKSLP K+E+ILR+E
Sbjct: 659 MPEKFSSWEDFEEEH---GKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME 715
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
MS LQKQYYKWIL RN+ L+KG +G+ LNI++ELKKCCNH +L + D+ +
Sbjct: 716 MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDN----NEF 771
Query: 479 INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
N L+ +I SSGKL++LDKLL+RL E +RVLIFSQMVRMLDILAEY+ Y+ F FQR
Sbjct: 772 YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQR 831
Query: 539 LDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 598
LDGS ELR QA+DHFNA GSEDFCFLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQ
Sbjct: 832 LDGSI-GELRRQALDHFNAXGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ 890
Query: 599 AMSRAHRIGQQEVV 612
A +RAHRIGQ++ V
Sbjct: 891 AQARAHRIGQKKQV 904
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 1509 (536.3 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 346/862 (40%), Positives = 507/862 (58%)
Query: 6 DSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVV-EDVR--FRKMV 62
D + D ++ EF IKW+ +SH H W++ L N +++ NY +KV+ ED+R + + V
Sbjct: 278 DPDIDRHQFEFYIKWQEKSHYHATWETTESLANCRSTRRLDNYVRKVLAEDLRLNYDEGV 337
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE 122
E+ E ++ +E D+D I+ + VER+IA R +D + EYLVKWK L Y TWE
Sbjct: 338 PPEDREKWNLDRERDVDAIEDHKIVERVIAMREGEDGT-----EYLVKWKRLFYDSCTWE 392
Query: 123 KDEII-DFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQ 181
+E+I + AQ ID + R + K + + P +L G+L+++Q
Sbjct: 393 SEELISNIAQREIDRFLDRSSRPPVSDKKES--HPSSRKPFEPIKGTPSFLHNGQLKEFQ 450
Query: 182 LEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNW 241
++G+NF+ +W + NV+LADEMGLGKTVQ+V+ + +L++ ++ GPF+VVVPLST+ +W
Sbjct: 451 VKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFISWLRHVRRQQGPFVVVVPLSTMPSW 510
Query: 242 AKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVL 301
A+ F W P +N +VY G ASR V ++YE D RP KFN LLTTYE VL D + L
Sbjct: 511 AETFDNWSPDLNYVVYNGNEASRNVLKEYELMVDGNPRRP-KFNVLLTTYEYVLVDSSFL 569
Query: 302 SKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHD 361
S+ W ++ VDEAHRLKN ++QLY L EF++ +LLITGTP+QN++ EL ALL FL+
Sbjct: 570 SQFNWQFMAVDEAHRLKNRDSQLYIKLQEFNSPARLLITGTPIQNNLAELSALLDFLNPG 629
Query: 362 KFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSP 421
D N + S +LA L + P +LRR VE LPPK E+I+RVE+S
Sbjct: 630 LVNVDADMDLNSEAASE----KLAELTKAISPFMLRRTKTKVESDLPPKTEKIIRVELSD 685
Query: 422 LQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGY-GGDTSIN 480
+Q +YYK IL +N+ LN+G +G + SLLNI++ELKK NHPF+F SA+ G T
Sbjct: 686 VQLEYYKNILTKNYAALNEGTKGQKQSLLNIMMELKKASNHPFMFPSAETKILEGSTRRE 745
Query: 481 DTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLD 540
D L +I SSGK+++LD+LL +L HRVLIFSQMV+MLDIL +YM Y+G+ +QRLD
Sbjct: 746 DV--LRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMEYRGYTYQRLD 803
Query: 541 GSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAM 600
G+ + R A++H+NAP S DF F+LSTRAGGLGINL TADTVI+FDSDWNPQ DLQAM
Sbjct: 804 GTIPSASRRLAIEHYNAPDSSDFAFILSTRAGGLGINLMTADTVILFDSDWNPQADLQAM 863
Query: 601 SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK--LNAEGSWRRKKQRK 658
+RAHRIGQ + V++YR V+ +VEE+++ERA+ K++L+ + IQ+ + E S + K +
Sbjct: 864 ARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEIQNKMAR 923
Query: 659 G----------NELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXX 708
G +++S IL+ + +F++ N + +L +DID
Sbjct: 924 GGITLGEPNSTDDISRILKRRGQRMFEQTGN----QAKLEQLDIDSVLANAELHQTEQAE 979
Query: 709 XXXXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSY-AEANEP 767
K ++ + D W I E Q E+ A + + Y A+ E
Sbjct: 980 GIQADGGEEFLKAFDYVDIKVDDLTWDDIIPKE---QLEEIKAEEKKKADEKYLADVIEQ 1036
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGN--LSKRDATR 825
R KR G E ER KR+ A V S+ DG ++ + L +++
Sbjct: 1037 NRPRKRIVAGDERDTRAERKAKRQ-ARVQV-SMNDDDGDDSEPNAKADPKRPLVEKEYRH 1094
Query: 826 FYRAVMKFGN-QSQISLIARDA 846
RA +++G+ + + + R+A
Sbjct: 1095 LLRAFLRYGDIEDREEEVIREA 1116
Score = 166 (63.5 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 90/374 (24%), Positives = 148/374 (39%)
Query: 642 IQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXX 701
IQ A G + +++S IL+ + +F++ N + +L +DID
Sbjct: 917 IQNKMARGGITLGEPNSTDDISRILKRRGQRMFEQTGN----QAKLEQLDIDSVLANAEL 972
Query: 702 XXXXXXXXXXXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSY 761
K ++ + D W I E Q E+ A + + Y
Sbjct: 973 HQTEQAEGIQADGGEEFLKAFDYVDIKVDDLTWDDIIPKE---QLEEIKAEEKKKADEKY 1029
Query: 762 -AEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGN--L 818
A+ E R KR G E ER KR+ A V S+ DG ++ + L
Sbjct: 1030 LADVIEQNRPRKRIVAGDERDTRAERKAKRQ-ARVQV-SMNDDDGDDSEPNAKADPKRPL 1087
Query: 819 SKRDATRFYRAVMKFGN-QSQISLIARDAG------GAVATAPQEVV---VELF--DIL- 865
+++ RA +++G+ + + + R+A V +A +E+ EL D+
Sbjct: 1088 VEKEYRHLLRAFLRYGDIEDREEEVIREARLTERDRDTVKSALREITDKAAELVREDVAR 1147
Query: 866 IDGCREAVEVGSPDPKGPPLLDFFGVS-VKANDLINRVEELQLLAKRISRYEDPIKQFRV 924
++ A +V + + L D GV + A ++ R E+++L + D + FRV
Sbjct: 1148 LEALENAGKVLTKKERKAVLFDLHGVKRLNAYTIVERPTEMRVLKEATLAVPD-FRNFRV 1206
Query: 925 LSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHET 984
K ++S C W +D L +GI HG+G W IR D LGL K L+ H
Sbjct: 1207 PEATKAPDYS--CSWGAREDGMLCVGISRHGYGAWMQIRDDPDLGLGDKFF---LEEH-- 1259
Query: 985 FLPRAPNLKERANA 998
R ER NA
Sbjct: 1260 ---RVERKTERLNA 1270
Score = 61 (26.5 bits), Expect = 6.0e-159, Sum P(2) = 6.0e-159
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 1159 SKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMRLWNYVSTF----SNLSGEKLHQIYSK 1214
S++R L IG I+ + E + RLW+YVS + G KL ++Y K
Sbjct: 1442 SELRRLLNKIGDFINSNL--QGENTGSLSSLETRLWHYVSVHYWPNKDAGGAKLQEMYHK 1499
Query: 1215 LKQERQEEA 1223
L + ++ A
Sbjct: 1500 LIEVHKKSA 1508
Score = 43 (20.2 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 73 SKEMDLDIIKQNSQVERIIADRISKDSSGNVTQ 105
S E + D + S+ R +A +ISK + + TQ
Sbjct: 144 SSESESDDVAPRSKRRRPLASQISKAPTRSATQ 176
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 1321 (470.1 bits), Expect = 2.7e-156, Sum P(4) = 2.7e-156
Identities = 272/532 (51%), Positives = 367/532 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QPE+L GG L YQ+EGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 704 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 763
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GPFLV PLST+ NW +EF W P M V+ YVG + SR + ++ EF + D
Sbjct: 764 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 823
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KK R +KF+ LLT+YE++ D A+L I W L+VDEAHRLKN++++ + L+
Sbjct: 824 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 883
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+S ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + +++ E+++ LH
Sbjct: 884 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK--EDQIKKLHD 941
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 942 MLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSL 1001
Query: 450 LNIVVELKKCCNHPFLFE-SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LN+V++LKKCCNHP+LF +A + D S L R +SGKL++L K+L L E
Sbjct: 1002 LNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIR---ASGKLLLLQKMLKNLKEG 1058
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ ++G++++R+DG +R +A+D FNAPG++ FCFLLS
Sbjct: 1059 GHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLS 1118
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I
Sbjct: 1119 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERIT 1178
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRND 680
+ AKKKM+L HLV++ + KQ EL IL+FG EELFK++ D
Sbjct: 1179 QVAKKKMMLTHLVVRPGLGSKTGSMSKQ----ELDDILKFGTEELFKDEATD 1226
Score = 158 (60.7 bits), Expect = 2.7e-156, Sum P(4) = 2.7e-156
Identities = 52/169 (30%), Positives = 80/169 (47%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK--VVE----DVRFRKMVSREE 66
E +F +KW+G S+ HC W S +L+ L NY +K + E D + SR+
Sbjct: 533 ERQFFVKWQGMSYWHCSWVSELQLE-LHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKR 591
Query: 67 IELNDVSKEMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEATWEK 123
+ EM+ + + E ++ RI S D G+V YL+KW+ L Y +A+WE
Sbjct: 592 KNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV--HYLIKWRDLPYDQASWES 649
Query: 124 D--EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+ EI D+ + RE E+G+ +K K LRKL+ PE
Sbjct: 650 EDVEIQDYDLFKQSYWNHRELMRGEEGRP---GKKLKKVKLRKLERPPE 695
Score = 70 (29.7 bits), Expect = 2.7e-156, Sum P(4) = 2.7e-156
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ + FL R
Sbjct: 1722 WHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEM-NRGNFLEIKNKFLARRFK 1780
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1781 LLEQAL 1786
Score = 60 (26.2 bits), Expect = 5.4e-146, Sum P(4) = 5.4e-146
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATW 121
K G +++ VKW+G+SY +W
Sbjct: 526 KPLEGRPERQFFVKWQGMSYWHCSW 550
Score = 43 (20.2 bits), Expect = 2.7e-156, Sum P(4) = 2.7e-156
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 816 GNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV 875
G++SK++ ++KFG + A D GG V+ D I+ + +
Sbjct: 1201 GSMSKQELDD----ILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQD 1256
Query: 876 GSPDPKGPPLLDFFGVSVKANDLINRVEEL 905
+ D + + ++ S K + R EE+
Sbjct: 1257 ETEDTELQGMNEYLS-SFKVAQYVVREEEM 1285
Score = 42 (19.8 bits), Expect = 1.5e-150, Sum P(3) = 1.5e-150
Identities = 17/91 (18%), Positives = 37/91 (40%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEM 1078
K +++ ++IL L +D+ G + + + + +E+ L + + E
Sbjct: 1199 KTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDET 1258
Query: 1079 SDNE-----EVYEQFKEVKWMEWCEDVMADE 1104
D E E FK +++ E+ M +E
Sbjct: 1259 EDTELQGMNEYLSSFKVAQYVVR-EEEMGEE 1288
Score = 41 (19.5 bits), Expect = 4.4e-156, Sum P(4) = 4.4e-156
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 628 LERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRL 687
+E+ ++K +D + + E +K++ + E+ +L+ G +D NDE+ KK +
Sbjct: 1634 VEKVEEKSAID---LTPIVVEDKEEKKEEEEKKEV--MLQNGETP---KDLNDEKQKKNI 1685
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 13/74 (17%), Positives = 35/74 (47%)
Query: 374 KNLSSFNENELANLHMELRPH-ILRRIIKDVEKSLPPKIER-ILRVEMSPLQKQYYKWIL 431
+N + EL ++ L + + ++++ E ++ER I++ E S + Y++ +L
Sbjct: 1253 RNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEES-VDPDYWEKLL 1311
Query: 432 ERNFHDLNKGVRGN 445
++ + + N
Sbjct: 1312 RHHYEQQQEDLARN 1325
Score = 40 (19.1 bits), Expect = 8.1e-07, Sum P(4) = 8.1e-07
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 932 KEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRV--ELSPMQKKYYK 980
Score = 40 (19.1 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK-LNAEGSWRRKKQRKGNELS 663
++ ++ +++ V EE E KK+++L + K LN E ++KK K +
Sbjct: 1636 KVEEKSAIDLTPIVVEDK-EEKKEEEEKKEVMLQNGETPKDLNDE---KQKKNIKQRFMF 1691
Query: 664 AILRFGAEELFKEDRNDEES 683
I G EL +N+E +
Sbjct: 1692 NIADGGFTELHSLWQNEERA 1711
Score = 39 (18.8 bits), Expect = 7.1e-156, Sum P(4) = 7.1e-156
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 675 KEDRNDEESKKRLL 688
KE++ +EE KK ++
Sbjct: 1653 KEEKKEEEEKKEVM 1666
Score = 38 (18.4 bits), Expect = 6.2e-153, Sum P(4) = 6.2e-153
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 1065 QRVEQPLTKEEGEMSDNEEVYEQ 1087
+R E+P+ E +D E+V E+
Sbjct: 1618 ERTEEPMETEPKGAADVEKVEEK 1640
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 1321 (470.1 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 272/532 (51%), Positives = 367/532 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QPE+L GG L YQ+EGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 711 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 770
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GPFLV PLST+ NW +EF W P M V+ YVG + SR + ++ EF + D
Sbjct: 771 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 830
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KK R +KF+ LLT+YE++ D A+L I W L+VDEAHRLKN++++ + L+
Sbjct: 831 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 890
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+S ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + +++ E+++ LH
Sbjct: 891 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK--EDQIKKLHD 948
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 949 MLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSL 1008
Query: 450 LNIVVELKKCCNHPFLFE-SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LN+V++LKKCCNHP+LF +A + D S L R +SGKL++L K+L L E
Sbjct: 1009 LNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIR---ASGKLLLLQKMLKNLKEG 1065
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ ++G++++R+DG +R +A+D FNAPG++ FCFLLS
Sbjct: 1066 GHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLS 1125
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I
Sbjct: 1126 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERIT 1185
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRND 680
+ AKKKM+L HLV++ + KQ EL IL+FG EELFK++ D
Sbjct: 1186 QVAKKKMMLTHLVVRPGLGSKTGSMSKQ----ELDDILKFGTEELFKDEATD 1233
Score = 158 (60.7 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 52/169 (30%), Positives = 80/169 (47%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK--VVE----DVRFRKMVSREE 66
E +F +KW+G S+ HC W S +L+ L NY +K + E D + SR+
Sbjct: 540 ERQFFVKWQGMSYWHCSWVSELQLE-LHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKR 598
Query: 67 IELNDVSKEMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEATWEK 123
+ EM+ + + E ++ RI S D G+V YL+KW+ L Y +A+WE
Sbjct: 599 KNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV--HYLIKWRDLPYDQASWES 656
Query: 124 D--EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+ EI D+ + RE E+G+ +K K LRKL+ PE
Sbjct: 657 EDVEIQDYDLFKQSYWNHRELMRGEEGRP---GKKLKKVKLRKLERPPE 702
Score = 70 (29.7 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ + FL R
Sbjct: 1729 WHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEM-NRGNFLEIKNKFLARRFK 1787
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1788 LLEQAL 1793
Score = 60 (26.2 bits), Expect = 6.8e-146, Sum P(4) = 6.8e-146
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATW 121
K G +++ VKW+G+SY +W
Sbjct: 533 KPLEGRPERQFFVKWQGMSYWHCSW 557
Score = 43 (20.2 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 816 GNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV 875
G++SK++ ++KFG + A D GG V+ D I+ + +
Sbjct: 1208 GSMSKQELDD----ILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQD 1263
Query: 876 GSPDPKGPPLLDFFGVSVKANDLINRVEEL 905
+ D + + ++ S K + R EE+
Sbjct: 1264 ETEDTELQGMNEYLS-SFKVAQYVVREEEM 1292
Score = 43 (20.2 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 594 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK-LNAEGSWR 652
+ + + ++ ++ ++ V++ V EE E KK+++L + K LN E +
Sbjct: 1632 ETEPKGVADVEKVEEKSAVDLTPIVVEDK-EEKKEEEEKKEVMLQNGETPKDLNDE---K 1687
Query: 653 RKKQRKGNELSAILRFGAEELFKEDRNDEES 683
+KK K + I G EL +N+E +
Sbjct: 1688 QKKNIKQRFMFNIADGGFTELHSLWQNEERA 1718
Score = 42 (19.8 bits), Expect = 1.8e-150, Sum P(3) = 1.8e-150
Identities = 17/91 (18%), Positives = 37/91 (40%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEM 1078
K +++ ++IL L +D+ G + + + + +E+ L + + E
Sbjct: 1206 KTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDET 1265
Query: 1079 SDNE-----EVYEQFKEVKWMEWCEDVMADE 1104
D E E FK +++ E+ M +E
Sbjct: 1266 EDTELQGMNEYLSSFKVAQYVVR-EEEMGEE 1295
Score = 41 (19.5 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 13/74 (17%), Positives = 35/74 (47%)
Query: 374 KNLSSFNENELANLHMELRPH-ILRRIIKDVEKSLPPKIER-ILRVEMSPLQKQYYKWIL 431
+N + EL ++ L + + ++++ E ++ER I++ E S + Y++ +L
Sbjct: 1260 RNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEES-VDPDYWEKLL 1318
Query: 432 ERNFHDLNKGVRGN 445
++ + + N
Sbjct: 1319 RHHYEQQQEDLARN 1332
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 618 VTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED 677
V VEE + E+A+ K + + + + +++ +L+ I+ E+ KE+
Sbjct: 1609 VEPPEVEEKV-EKAEVKERTEEPMETEPKGVADVEKVEEKSAVDLTPIV---VED--KEE 1662
Query: 678 RNDEESKKRLL 688
+ +EE KK ++
Sbjct: 1663 KKEEEEKKEVM 1673
Score = 40 (19.1 bits), Expect = 7.0e-156, Sum P(4) = 7.0e-156
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 628 LERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRL 687
+E+ ++K +D + + E +K++ + E+ +L+ G +D NDE+ KK +
Sbjct: 1641 VEKVEEKSAVD---LTPIVVEDKEEKKEEEEKKEV--MLQNGETP---KDLNDEKQKKNI 1692
Score = 40 (19.1 bits), Expect = 4.9e-153, Sum P(4) = 4.9e-153
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 1065 QRVEQPLTKEEGEMSDNEEVYEQ 1087
+R E+P+ E ++D E+V E+
Sbjct: 1625 ERTEEPMETEPKGVADVEKVEEK 1647
Score = 40 (19.1 bits), Expect = 8.2e-07, Sum P(4) = 8.2e-07
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 939 KEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRV--ELSPMQKKYYK 987
Score = 37 (18.1 bits), Expect = 1.5e-155, Sum P(4) = 1.5e-155
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKK 776
+P+ VA E A T E E ++ + KK+
Sbjct: 1634 EPKGVADVEKVEEKSAVDLTPIVVEDKEEKKEEEEKKE 1671
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 1321 (470.1 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 272/532 (51%), Positives = 367/532 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QPE+L GG L YQ+EGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 711 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 770
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GPFLV PLST+ NW +EF W P M V+ YVG + SR + ++ EF + D
Sbjct: 771 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 830
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KK R +KF+ LLT+YE++ D A+L I W L+VDEAHRLKN++++ + L+
Sbjct: 831 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 890
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+S ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + +++ E+++ LH
Sbjct: 891 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK--EDQIKKLHD 948
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 949 MLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSL 1008
Query: 450 LNIVVELKKCCNHPFLFE-SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LN+V++LKKCCNHP+LF +A + D S L R +SGKL++L K+L L E
Sbjct: 1009 LNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIR---ASGKLLLLQKMLKNLKEG 1065
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ ++G++++R+DG +R +A+D FNAPG++ FCFLLS
Sbjct: 1066 GHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLS 1125
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I
Sbjct: 1126 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERIT 1185
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRND 680
+ AKKKM+L HLV++ + KQ EL IL+FG EELFK++ D
Sbjct: 1186 QVAKKKMMLTHLVVRPGLGSKTGSMSKQ----ELDDILKFGTEELFKDEATD 1233
Score = 158 (60.7 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 52/169 (30%), Positives = 80/169 (47%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK--VVE----DVRFRKMVSREE 66
E +F +KW+G S+ HC W S +L+ L NY +K + E D + SR+
Sbjct: 540 ERQFFVKWQGMSYWHCSWVSELQLE-LHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKR 598
Query: 67 IELNDVSKEMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEATWEK 123
+ EM+ + + E ++ RI S D G+V YL+KW+ L Y +A+WE
Sbjct: 599 KNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV--HYLIKWRDLPYDQASWES 656
Query: 124 D--EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+ EI D+ + RE E+G+ +K K LRKL+ PE
Sbjct: 657 EDVEIQDYDLFKQSYWNHRELMRGEEGRP---GKKLKKVKLRKLERPPE 702
Score = 70 (29.7 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ + FL R
Sbjct: 1729 WHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEM-NRGNFLEIKNKFLARRFK 1787
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1788 LLEQAL 1793
Score = 60 (26.2 bits), Expect = 6.8e-146, Sum P(4) = 6.8e-146
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATW 121
K G +++ VKW+G+SY +W
Sbjct: 533 KPLEGRPERQFFVKWQGMSYWHCSW 557
Score = 43 (20.2 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 816 GNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV 875
G++SK++ ++KFG + A D GG V+ D I+ + +
Sbjct: 1208 GSMSKQELDD----ILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQD 1263
Query: 876 GSPDPKGPPLLDFFGVSVKANDLINRVEEL 905
+ D + + ++ S K + R EE+
Sbjct: 1264 ETEDTELQGMNEYLS-SFKVAQYVVREEEM 1292
Score = 42 (19.8 bits), Expect = 1.8e-150, Sum P(3) = 1.8e-150
Identities = 17/91 (18%), Positives = 37/91 (40%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEM 1078
K +++ ++IL L +D+ G + + + + +E+ L + + E
Sbjct: 1206 KTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDET 1265
Query: 1079 SDNE-----EVYEQFKEVKWMEWCEDVMADE 1104
D E E FK +++ E+ M +E
Sbjct: 1266 EDTELQGMNEYLSSFKVAQYVVR-EEEMGEE 1295
Score = 41 (19.5 bits), Expect = 5.5e-156, Sum P(4) = 5.5e-156
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 628 LERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRL 687
+E+ ++K +D + + E +K++ + E+ +L+ G +D NDE+ KK +
Sbjct: 1641 VEKVEEKSAID---LTPIVVEDKEEKKEEEEKKEV--MLQNGETP---KDLNDEKQKKNI 1692
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 13/74 (17%), Positives = 35/74 (47%)
Query: 374 KNLSSFNENELANLHMELRPH-ILRRIIKDVEKSLPPKIER-ILRVEMSPLQKQYYKWIL 431
+N + EL ++ L + + ++++ E ++ER I++ E S + Y++ +L
Sbjct: 1260 RNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEES-VDPDYWEKLL 1318
Query: 432 ERNFHDLNKGVRGN 445
++ + + N
Sbjct: 1319 RHHYEQQQEDLARN 1332
Score = 40 (19.1 bits), Expect = 8.2e-07, Sum P(4) = 8.2e-07
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 939 KEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRV--ELSPMQKKYYK 987
Score = 40 (19.1 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK-LNAEGSWRRKKQRKGNELS 663
++ ++ +++ V EE E KK+++L + K LN E ++KK K +
Sbjct: 1643 KVEEKSAIDLTPIVVEDK-EEKKEEEEKKEVMLQNGETPKDLNDE---KQKKNIKQRFMF 1698
Query: 664 AILRFGAEELFKEDRNDEES 683
I G EL +N+E +
Sbjct: 1699 NIADGGFTELHSLWQNEERA 1718
Score = 39 (18.8 bits), Expect = 9.0e-156, Sum P(4) = 9.0e-156
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 675 KEDRNDEESKKRLL 688
KE++ +EE KK ++
Sbjct: 1660 KEEKKEEEEKKEVM 1673
Score = 38 (18.4 bits), Expect = 7.9e-153, Sum P(4) = 7.9e-153
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 1065 QRVEQPLTKEEGEMSDNEEVYEQ 1087
+R E+P+ E +D E+V E+
Sbjct: 1625 ERTEEPMETEPKGAADVEKVEEK 1647
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 1321 (470.1 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 272/532 (51%), Positives = 367/532 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QPE+L GG L YQ+EGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 711 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 770
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GPFLV PLST+ NW +EF W P M V+ YVG + SR + ++ EF + D
Sbjct: 771 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 830
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KK R +KF+ LLT+YE++ D A+L I W L+VDEAHRLKN++++ + L+
Sbjct: 831 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 890
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+S ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + +++ E+++ LH
Sbjct: 891 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK--EDQIKKLHD 948
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 949 MLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSL 1008
Query: 450 LNIVVELKKCCNHPFLFE-SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LN+V++LKKCCNHP+LF +A + D S L R +SGKL++L K+L L E
Sbjct: 1009 LNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIR---ASGKLLLLQKMLKNLKEG 1065
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ ++G++++R+DG +R +A+D FNAPG++ FCFLLS
Sbjct: 1066 GHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLS 1125
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I
Sbjct: 1126 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERIT 1185
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRND 680
+ AKKKM+L HLV++ + KQ EL IL+FG EELFK++ D
Sbjct: 1186 QVAKKKMMLTHLVVRPGLGSKTGSMSKQ----ELDDILKFGTEELFKDEATD 1233
Score = 158 (60.7 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 52/169 (30%), Positives = 80/169 (47%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK--VVE----DVRFRKMVSREE 66
E +F +KW+G S+ HC W S +L+ L NY +K + E D + SR+
Sbjct: 540 ERQFFVKWQGMSYWHCSWVSELQLE-LHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKR 598
Query: 67 IELNDVSKEMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEATWEK 123
+ EM+ + + E ++ RI S D G+V YL+KW+ L Y +A+WE
Sbjct: 599 KNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV--HYLIKWRDLPYDQASWES 656
Query: 124 D--EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+ EI D+ + RE E+G+ +K K LRKL+ PE
Sbjct: 657 EDVEIQDYDLFKQSYWNHRELMRGEEGRP---GKKLKKVKLRKLERPPE 702
Score = 70 (29.7 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ + FL R
Sbjct: 1729 WHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEM-NRGNFLEIKNKFLARRFK 1787
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1788 LLEQAL 1793
Score = 60 (26.2 bits), Expect = 6.8e-146, Sum P(4) = 6.8e-146
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATW 121
K G +++ VKW+G+SY +W
Sbjct: 533 KPLEGRPERQFFVKWQGMSYWHCSW 557
Score = 43 (20.2 bits), Expect = 3.4e-156, Sum P(4) = 3.4e-156
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 816 GNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV 875
G++SK++ ++KFG + A D GG V+ D I+ + +
Sbjct: 1208 GSMSKQELDD----ILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQD 1263
Query: 876 GSPDPKGPPLLDFFGVSVKANDLINRVEEL 905
+ D + + ++ S K + R EE+
Sbjct: 1264 ETEDTELQGMNEYLS-SFKVAQYVVREEEM 1292
Score = 42 (19.8 bits), Expect = 1.8e-150, Sum P(3) = 1.8e-150
Identities = 17/91 (18%), Positives = 37/91 (40%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEM 1078
K +++ ++IL L +D+ G + + + + +E+ L + + E
Sbjct: 1206 KTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDET 1265
Query: 1079 SDNE-----EVYEQFKEVKWMEWCEDVMADE 1104
D E E FK +++ E+ M +E
Sbjct: 1266 EDTELQGMNEYLSSFKVAQYVVR-EEEMGEE 1295
Score = 41 (19.5 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 13/74 (17%), Positives = 35/74 (47%)
Query: 374 KNLSSFNENELANLHMELRPH-ILRRIIKDVEKSLPPKIER-ILRVEMSPLQKQYYKWIL 431
+N + EL ++ L + + ++++ E ++ER I++ E S + Y++ +L
Sbjct: 1260 RNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEES-VDPDYWEKLL 1318
Query: 432 ERNFHDLNKGVRGN 445
++ + + N
Sbjct: 1319 RHHYEQQQEDLARN 1332
Score = 40 (19.1 bits), Expect = 8.2e-07, Sum P(4) = 8.2e-07
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 939 KEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRV--ELSPMQKKYYK 987
Score = 39 (18.8 bits), Expect = 9.0e-156, Sum P(4) = 9.0e-156
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 675 KEDRNDEESKKRLL 688
KE++ +EE KK ++
Sbjct: 1660 KEEKKEEEEKKEVM 1673
Score = 39 (18.8 bits), Expect = 9.0e-156, Sum P(4) = 9.0e-156
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 628 LERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRL 687
+E+A++K D + I E +K++ + E+ +L+ G +D NDE+ KK +
Sbjct: 1641 VEKAEEKAAGDLIPIV---VEDKEEKKEEEEKKEV--MLQNGETP---KDLNDEKQKKNI 1692
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 1321 (470.1 bits), Expect = 3.8e-156, Sum P(4) = 3.8e-156
Identities = 272/532 (51%), Positives = 367/532 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QPE+L GG L YQ+EGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 704 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 763
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GPFLV PLST+ NW +EF W P M V+ YVG + SR + ++ EF + D
Sbjct: 764 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 823
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KK R +KF+ LLT+YE++ D A+L I W L+VDEAHRLKN++++ + L+
Sbjct: 824 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 883
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+S ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + +++ E+++ LH
Sbjct: 884 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK--EDQIKKLHD 941
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 942 MLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSL 1001
Query: 450 LNIVVELKKCCNHPFLFE-SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LN+V++LKKCCNHP+LF +A + D S L R +SGKL++L K+L L E
Sbjct: 1002 LNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIR---ASGKLLLLQKMLKNLKEG 1058
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ ++G++++R+DG +R +A+D FNAPG++ FCFLLS
Sbjct: 1059 GHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLS 1118
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I
Sbjct: 1119 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERIT 1178
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRND 680
+ AKKKM+L HLV++ + KQ EL IL+FG EELFK++ D
Sbjct: 1179 QVAKKKMMLTHLVVRPGLGSKTGSMSKQ----ELDDILKFGTEELFKDEATD 1226
Score = 158 (60.7 bits), Expect = 3.8e-156, Sum P(4) = 3.8e-156
Identities = 52/169 (30%), Positives = 80/169 (47%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK--VVE----DVRFRKMVSREE 66
E +F +KW+G S+ HC W S +L+ L NY +K + E D + SR+
Sbjct: 533 ERQFFVKWQGMSYWHCSWVSELQLE-LHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKR 591
Query: 67 IELNDVSKEMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEATWEK 123
+ EM+ + + E ++ RI S D G+V YL+KW+ L Y +A+WE
Sbjct: 592 KNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV--HYLIKWRDLPYDQASWES 649
Query: 124 D--EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+ EI D+ + RE E+G+ +K K LRKL+ PE
Sbjct: 650 EDVEIQDYDLFKQSYWNHRELMRGEEGRP---GKKLKKVKLRKLERPPE 695
Score = 70 (29.7 bits), Expect = 3.8e-156, Sum P(4) = 3.8e-156
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ + FL R
Sbjct: 1732 WHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEM-NRGNFLEIKNKFLARRFK 1790
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1791 LLEQAL 1796
Score = 60 (26.2 bits), Expect = 7.5e-146, Sum P(4) = 7.5e-146
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATW 121
K G +++ VKW+G+SY +W
Sbjct: 526 KPLEGRPERQFFVKWQGMSYWHCSW 550
Score = 43 (20.2 bits), Expect = 3.8e-156, Sum P(4) = 3.8e-156
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQE 785
+P A A A A + K+ AE E E ++ + +EP E
Sbjct: 1589 QPPAPAPATAPATATAPEDDKAPAEPPEGEEKVEKAEVKERTEEPME 1635
Score = 43 (20.2 bits), Expect = 3.8e-156, Sum P(4) = 3.8e-156
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 816 GNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV 875
G++SK++ ++KFG + A D GG V+ D I+ + +
Sbjct: 1201 GSMSKQELDD----ILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQD 1256
Query: 876 GSPDPKGPPLLDFFGVSVKANDLINRVEEL 905
+ D + + ++ S K + R EE+
Sbjct: 1257 ETEDTELQGMNEYLS-SFKVAQYVVREEEM 1285
Score = 42 (19.8 bits), Expect = 1.9e-150, Sum P(3) = 1.9e-150
Identities = 17/91 (18%), Positives = 37/91 (40%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEM 1078
K +++ ++IL L +D+ G + + + + +E+ L + + E
Sbjct: 1199 KTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDET 1258
Query: 1079 SDNE-----EVYEQFKEVKWMEWCEDVMADE 1104
D E E FK +++ E+ M +E
Sbjct: 1259 EDTELQGMNEYLSSFKVAQYVVR-EEEMGEE 1288
Score = 41 (19.5 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 13/74 (17%), Positives = 35/74 (47%)
Query: 374 KNLSSFNENELANLHMELRPH-ILRRIIKDVEKSLPPKIER-ILRVEMSPLQKQYYKWIL 431
+N + EL ++ L + + ++++ E ++ER I++ E S + Y++ +L
Sbjct: 1253 RNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEES-VDPDYWEKLL 1311
Query: 432 ERNFHDLNKGVRGN 445
++ + + N
Sbjct: 1312 RHHYEQQQEDLARN 1325
Score = 40 (19.1 bits), Expect = 8.3e-07, Sum P(4) = 8.3e-07
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 932 KEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRV--ELSPMQKKYYK 980
Score = 40 (19.1 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 20/91 (21%), Positives = 40/91 (43%)
Query: 594 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK-LNAEGSWR 652
+ + + + ++ ++ V++ V EE E KK ++L + K L+ E +
Sbjct: 1635 ETEAKGTTEVEKVEEKSAVDLTPIVVEDK-EEKKEEEEKKDVMLQNGETPKDLSDE---K 1690
Query: 653 RKKQRKGNELSAILRFGAEELFKEDRNDEES 683
+KK K + I G EL +N+E +
Sbjct: 1691 QKKNSKQRFMFNIADGGFTELHSLWQNEERA 1721
Score = 39 (18.8 bits), Expect = 6.8e-153, Sum P(4) = 6.8e-153
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 1048 GSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEV------YEQFKEVKWMEWCEDVM 1101
G KV K+R +P E T E ++ + V E +E K E +DVM
Sbjct: 1617 GEEKVEKAEVKERTEEPMETEAKGTTEVEKVEEKSAVDLTPIVVEDKEEKKEEEEKKDVM 1676
Score = 37 (18.1 bits), Expect = 1.6e-155, Sum P(4) = 1.6e-155
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 675 KEDRNDEESKKRLL 688
KE++ +EE KK ++
Sbjct: 1663 KEEKKEEEEKKDVM 1676
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 1321 (470.1 bits), Expect = 3.8e-156, Sum P(4) = 3.8e-156
Identities = 272/532 (51%), Positives = 367/532 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QPE+L GG L YQ+EGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 704 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 763
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GPFLV PLST+ NW +EF W P M V+ YVG + SR + ++ EF + D
Sbjct: 764 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 823
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KK R +KF+ LLT+YE++ D A+L I W L+VDEAHRLKN++++ + L+
Sbjct: 824 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 883
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+S ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + +++ E+++ LH
Sbjct: 884 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK--EDQIKKLHD 941
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 942 MLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSL 1001
Query: 450 LNIVVELKKCCNHPFLFE-SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LN+V++LKKCCNHP+LF +A + D S L R +SGKL++L K+L L E
Sbjct: 1002 LNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIR---ASGKLLLLQKMLKNLKEG 1058
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ ++G++++R+DG +R +A+D FNAPG++ FCFLLS
Sbjct: 1059 GHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLS 1118
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I
Sbjct: 1119 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERIT 1178
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRND 680
+ AKKKM+L HLV++ + KQ EL IL+FG EELFK++ D
Sbjct: 1179 QVAKKKMMLTHLVVRPGLGSKTGSMSKQ----ELDDILKFGTEELFKDEATD 1226
Score = 158 (60.7 bits), Expect = 3.8e-156, Sum P(4) = 3.8e-156
Identities = 52/169 (30%), Positives = 80/169 (47%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK--VVE----DVRFRKMVSREE 66
E +F +KW+G S+ HC W S +L+ L NY +K + E D + SR+
Sbjct: 533 ERQFFVKWQGMSYWHCSWVSELQLE-LHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKR 591
Query: 67 IELNDVSKEMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEATWEK 123
+ EM+ + + E ++ RI S D G+V YL+KW+ L Y +A+WE
Sbjct: 592 KNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV--HYLIKWRDLPYDQASWES 649
Query: 124 D--EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+ EI D+ + RE E+G+ +K K LRKL+ PE
Sbjct: 650 EDVEIQDYDLFKQSYWNHRELMRGEEGRP---GKKLKKVKLRKLERPPE 695
Score = 70 (29.7 bits), Expect = 3.8e-156, Sum P(4) = 3.8e-156
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ + FL R
Sbjct: 1732 WHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEM-NRGNFLEIKNKFLARRFK 1790
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1791 LLEQAL 1796
Score = 60 (26.2 bits), Expect = 7.5e-146, Sum P(4) = 7.5e-146
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATW 121
K G +++ VKW+G+SY +W
Sbjct: 526 KPLEGRPERQFFVKWQGMSYWHCSW 550
Score = 43 (20.2 bits), Expect = 3.8e-156, Sum P(4) = 3.8e-156
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 816 GNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV 875
G++SK++ ++KFG + A D GG V+ D I+ + +
Sbjct: 1201 GSMSKQELDD----ILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQD 1256
Query: 876 GSPDPKGPPLLDFFGVSVKANDLINRVEEL 905
+ D + + ++ S K + R EE+
Sbjct: 1257 ETEDTELQGMNEYLS-SFKVAQYVVREEEM 1285
Score = 42 (19.8 bits), Expect = 1.9e-150, Sum P(3) = 1.9e-150
Identities = 17/91 (18%), Positives = 37/91 (40%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEM 1078
K +++ ++IL L +D+ G + + + + +E+ L + + E
Sbjct: 1199 KTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDET 1258
Query: 1079 SDNE-----EVYEQFKEVKWMEWCEDVMADE 1104
D E E FK +++ E+ M +E
Sbjct: 1259 EDTELQGMNEYLSSFKVAQYVVR-EEEMGEE 1288
Score = 41 (19.5 bits), Expect = 6.1e-156, Sum P(4) = 6.1e-156
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 675 KEDRNDEESKKRLL 688
KE++ +EE KK +L
Sbjct: 1663 KEEKKEEEEKKEVL 1676
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 13/74 (17%), Positives = 35/74 (47%)
Query: 374 KNLSSFNENELANLHMELRPH-ILRRIIKDVEKSLPPKIER-ILRVEMSPLQKQYYKWIL 431
+N + EL ++ L + + ++++ E ++ER I++ E S + Y++ +L
Sbjct: 1253 RNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEES-VDPDYWEKLL 1311
Query: 432 ERNFHDLNKGVRGN 445
++ + + N
Sbjct: 1312 RHHYEQQQEDLARN 1325
Score = 40 (19.1 bits), Expect = 8.3e-07, Sum P(4) = 8.3e-07
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 932 KEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRV--ELSPMQKKYYK 980
Score = 39 (18.8 bits), Expect = 9.9e-156, Sum P(4) = 9.9e-156
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
+P A A A A + K+ AE E E ++ + +EP E K
Sbjct: 1589 QPPAPAPAPAPGPAPAPEDDKAPAEPPEGEEKVEKAEVKERAEEPMETESK 1639
Score = 37 (18.1 bits), Expect = 1.1e-152, Sum P(4) = 1.1e-152
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 1048 GSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEV 1084
G KV K+R +P E T E + + V
Sbjct: 1617 GEEKVEKAEVKERAEEPMETESKGTTEVEKAEEKSAV 1653
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 1321 (470.1 bits), Expect = 4.1e-156, Sum P(4) = 4.1e-156
Identities = 272/532 (51%), Positives = 367/532 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QPE+L GG L YQ+EGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 733 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 792
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GPFLV PLST+ NW +EF W P M V+ YVG + SR + ++ EF + D
Sbjct: 793 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 852
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KK R +KF+ LLT+YE++ D A+L I W L+VDEAHRLKN++++ + L+
Sbjct: 853 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 912
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+S ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + +++ E+++ LH
Sbjct: 913 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK--EDQIKKLHD 970
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 971 MLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSL 1030
Query: 450 LNIVVELKKCCNHPFLFE-SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LN+V++LKKCCNHP+LF +A + D S L R +SGKL++L K+L L E
Sbjct: 1031 LNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIR---ASGKLLLLQKMLKNLKEG 1087
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ ++G++++R+DG +R +A+D FNAPG++ FCFLLS
Sbjct: 1088 GHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLS 1147
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I
Sbjct: 1148 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERIT 1207
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRND 680
+ AKKKM+L HLV++ + KQ EL IL+FG EELFK++ D
Sbjct: 1208 QVAKKKMMLTHLVVRPGLGSKTGSMSKQ----ELDDILKFGTEELFKDEATD 1255
Score = 158 (60.7 bits), Expect = 4.1e-156, Sum P(4) = 4.1e-156
Identities = 52/169 (30%), Positives = 80/169 (47%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK--VVE----DVRFRKMVSREE 66
E +F +KW+G S+ HC W S +L+ L NY +K + E D + SR+
Sbjct: 562 ERQFFVKWQGMSYWHCSWVSELQLE-LHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKR 620
Query: 67 IELNDVSKEMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEATWEK 123
+ EM+ + + E ++ RI S D G+V YL+KW+ L Y +A+WE
Sbjct: 621 KNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV--HYLIKWRDLPYDQASWES 678
Query: 124 D--EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+ EI D+ + RE E+G+ +K K LRKL+ PE
Sbjct: 679 EDVEIQDYDLFKQSYWNHRELMRGEEGRP---GKKLKKVKLRKLERPPE 724
Score = 70 (29.7 bits), Expect = 4.1e-156, Sum P(4) = 4.1e-156
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ + FL R
Sbjct: 1751 WHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEM-NRGNFLEIKNKFLARRFK 1809
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1810 LLEQAL 1815
Score = 60 (26.2 bits), Expect = 8.2e-146, Sum P(4) = 8.2e-146
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATW 121
K G +++ VKW+G+SY +W
Sbjct: 555 KPLEGRPERQFFVKWQGMSYWHCSW 579
Score = 45 (20.9 bits), Expect = 4.1e-156, Sum P(4) = 4.1e-156
Identities = 21/71 (29%), Positives = 31/71 (43%)
Query: 727 AEDDGSFWSRWIKPEAVAQAED---ALAPRAARN-TKSYAEANEPERSNKRKKKGSELQE 782
AED +K E A+AE ++ P AA T+ A A+E E+ +G E E
Sbjct: 1582 AEDGIKVEENNLKEEESAEAEKEVKSVPPEAAVECTQPPAPASEEEKVPVEPPEGEEKVE 1641
Query: 783 PQERVHKRRKA 793
E + +A
Sbjct: 1642 KAEVKERTEEA 1652
Score = 43 (20.2 bits), Expect = 6.6e-156, Sum P(4) = 6.6e-156
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 816 GNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV 875
G++SK++ ++KFG + A D GG V+ D I+ + +
Sbjct: 1230 GSMSKQELDD----ILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQD 1285
Query: 876 GSPDPKGPPLLDFFGVSVKANDLINRVEEL 905
+ D + + ++ S K + R EE+
Sbjct: 1286 ETEDTELQGMNEYLS-SFKVAQYVVREEEM 1314
Score = 43 (20.2 bits), Expect = 6.9e-07, Sum P(4) = 6.9e-07
Identities = 22/91 (24%), Positives = 41/91 (45%)
Query: 594 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK-LNAEGSWR 652
+ D + + ++ ++ V++ V EE E KK+++L + K LN E +
Sbjct: 1654 ETDPKGNADVEKVEEKAAVDLTPIVVEDK-EEKKEEEEKKEVMLQNGETPKDLNDE---K 1709
Query: 653 RKKQRKGNELSAILRFGAEELFKEDRNDEES 683
+KK K + I G EL +N+E +
Sbjct: 1710 QKKNIKQRFMFNIADGGFTELHSLWQNEERA 1740
Score = 42 (19.8 bits), Expect = 2.9e-150, Sum P(3) = 2.9e-150
Identities = 17/91 (18%), Positives = 37/91 (40%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEM 1078
K +++ ++IL L +D+ G + + + + +E+ L + + E
Sbjct: 1228 KTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDET 1287
Query: 1079 SDNE-----EVYEQFKEVKWMEWCEDVMADE 1104
D E E FK +++ E+ M +E
Sbjct: 1288 EDTELQGMNEYLSSFKVAQYVVR-EEEMGEE 1317
Score = 41 (19.5 bits), Expect = 4.4e-07, Sum P(4) = 4.4e-07
Identities = 13/74 (17%), Positives = 35/74 (47%)
Query: 374 KNLSSFNENELANLHMELRPH-ILRRIIKDVEKSLPPKIER-ILRVEMSPLQKQYYKWIL 431
+N + EL ++ L + + ++++ E ++ER I++ E S + Y++ +L
Sbjct: 1282 RNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEES-VDPDYWEKLL 1340
Query: 432 ERNFHDLNKGVRGN 445
++ + + N
Sbjct: 1341 RHHYEQQQEDLARN 1354
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 18/69 (26%), Positives = 38/69 (55%)
Query: 621 KSVEE-DILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRN 679
+ VE+ ++ ER ++ M D K NA+ + +++ +L+ I+ E+ KE++
Sbjct: 1638 EKVEKAEVKERTEEAMETD----PKGNADVE--KVEEKAAVDLTPIV---VED--KEEKK 1686
Query: 680 DEESKKRLL 688
+EE KK ++
Sbjct: 1687 EEEEKKEVM 1695
Score = 40 (19.1 bits), Expect = 1.4e-155, Sum P(4) = 1.4e-155
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 628 LERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRL 687
+E+ ++K +D + + E +K++ + E+ +L+ G +D NDE+ KK +
Sbjct: 1663 VEKVEEKAAVD---LTPIVVEDKEEKKEEEEKKEV--MLQNGETP---KDLNDEKQKKNI 1714
Score = 40 (19.1 bits), Expect = 8.6e-07, Sum P(4) = 8.6e-07
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 961 KEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRV--ELSPMQKKYYK 1009
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 1321 (470.1 bits), Expect = 6.3e-156, Sum P(4) = 6.3e-156
Identities = 272/532 (51%), Positives = 367/532 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QPE+L GG L YQ+EGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 731 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 790
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GPFLV PLST+ NW +EF W P M V+ YVG + SR + ++ EF + D
Sbjct: 791 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 850
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KK R +KF+ LLT+YE++ D A+L I W L+VDEAHRLKN++++ + L+
Sbjct: 851 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 910
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+S ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + +++ E+++ LH
Sbjct: 911 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK--EDQIKKLHD 968
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 969 MLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSL 1028
Query: 450 LNIVVELKKCCNHPFLFE-SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LN+V++LKKCCNHP+LF +A + D S L R +SGKL++L K+L L E
Sbjct: 1029 LNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIR---ASGKLLLLQKMLKNLKEG 1085
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ ++G++++R+DG +R +A+D FNAPG++ FCFLLS
Sbjct: 1086 GHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLS 1145
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I
Sbjct: 1146 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERIT 1205
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRND 680
+ AKKKM+L HLV++ + KQ EL IL+FG EELFK++ D
Sbjct: 1206 QVAKKKMMLTHLVVRPGLGSKTGSMSKQ----ELDDILKFGTEELFKDEATD 1253
Score = 158 (60.7 bits), Expect = 6.3e-156, Sum P(4) = 6.3e-156
Identities = 52/169 (30%), Positives = 80/169 (47%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK--VVE----DVRFRKMVSREE 66
E +F +KW+G S+ HC W S +L+ L NY +K + E D + SR+
Sbjct: 560 ERQFFVKWQGMSYWHCSWVSELQLE-LHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKR 618
Query: 67 IELNDVSKEMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEATWEK 123
+ EM+ + + E ++ RI S D G+V YL+KW+ L Y +A+WE
Sbjct: 619 KNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV--HYLIKWRDLPYDQASWES 676
Query: 124 D--EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+ EI D+ + RE E+G+ +K K LRKL+ PE
Sbjct: 677 EDVEIQDYDLFKQSYWNHRELMRGEEGRP---GKKLKKVKLRKLERPPE 722
Score = 70 (29.7 bits), Expect = 6.3e-156, Sum P(4) = 6.3e-156
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ + FL R
Sbjct: 1749 WHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEM-NRGNFLEIKNKFLARRFK 1807
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1808 LLEQAL 1813
Score = 60 (26.2 bits), Expect = 1.3e-145, Sum P(4) = 1.3e-145
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATW 121
K G +++ VKW+G+SY +W
Sbjct: 553 KPLEGRPERQFFVKWQGMSYWHCSW 577
Score = 43 (20.2 bits), Expect = 6.3e-156, Sum P(4) = 6.3e-156
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 816 GNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV 875
G++SK++ ++KFG + A D GG V+ D I+ + +
Sbjct: 1228 GSMSKQELDD----ILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQD 1283
Query: 876 GSPDPKGPPLLDFFGVSVKANDLINRVEEL 905
+ D + + ++ S K + R EE+
Sbjct: 1284 ETEDTELQGMNEYLS-SFKVAQYVVREEEM 1312
Score = 43 (20.2 bits), Expect = 6.9e-07, Sum P(4) = 6.9e-07
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 594 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK-LNAEGSWR 652
+ + + ++ ++ ++ V++ V EE E KK+++L + K LN E +
Sbjct: 1652 ETEPKGVADVEKVEEKSAVDLTPIVVEDK-EEKKEEEEKKEVMLQNGETPKDLNDE---K 1707
Query: 653 RKKQRKGNELSAILRFGAEELFKEDRNDEES 683
+KK K + I G EL +N+E +
Sbjct: 1708 QKKNIKQRFMFNIADGGFTELHSLWQNEERA 1738
Score = 42 (19.8 bits), Expect = 2.8e-150, Sum P(3) = 2.8e-150
Identities = 17/91 (18%), Positives = 37/91 (40%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEM 1078
K +++ ++IL L +D+ G + + + + +E+ L + + E
Sbjct: 1226 KTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDET 1285
Query: 1079 SDNE-----EVYEQFKEVKWMEWCEDVMADE 1104
D E E FK +++ E+ M +E
Sbjct: 1286 EDTELQGMNEYLSSFKVAQYVVR-EEEMGEE 1315
Score = 41 (19.5 bits), Expect = 6.9e-07, Sum P(4) = 6.9e-07
Identities = 13/74 (17%), Positives = 35/74 (47%)
Query: 374 KNLSSFNENELANLHMELRPH-ILRRIIKDVEKSLPPKIER-ILRVEMSPLQKQYYKWIL 431
+N + EL ++ L + + ++++ E ++ER I++ E S + Y++ +L
Sbjct: 1280 RNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEES-VDPDYWEKLL 1338
Query: 432 ERNFHDLNKGVRGN 445
++ + + N
Sbjct: 1339 RHHYEQQQEDLARN 1352
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 618 VTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED 677
V VEE + E+A+ K + + + + +++ +L+ I+ E+ KE+
Sbjct: 1629 VEPPEVEEKV-EKAEVKERTEEPMETEPKGVADVEKVEEKSAVDLTPIV---VED--KEE 1682
Query: 678 RNDEESKKRLL 688
+ +EE KK ++
Sbjct: 1683 KKEEEEKKEVM 1693
Score = 40 (19.1 bits), Expect = 1.3e-155, Sum P(4) = 1.3e-155
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 628 LERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRL 687
+E+ ++K +D + + E +K++ + E+ +L+ G +D NDE+ KK +
Sbjct: 1661 VEKVEEKSAVD---LTPIVVEDKEEKKEEEEKKEV--MLQNGETP---KDLNDEKQKKNI 1712
Score = 40 (19.1 bits), Expect = 8.9e-153, Sum P(4) = 8.9e-153
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 1065 QRVEQPLTKEEGEMSDNEEVYEQ 1087
+R E+P+ E ++D E+V E+
Sbjct: 1645 ERTEEPMETEPKGVADVEKVEEK 1667
Score = 40 (19.1 bits), Expect = 8.6e-07, Sum P(4) = 8.6e-07
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 959 KEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRV--ELSPMQKKYYK 1007
Score = 37 (18.1 bits), Expect = 2.7e-155, Sum P(4) = 2.7e-155
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKK 776
+P+ VA E A T E E ++ + KK+
Sbjct: 1654 EPKGVADVEKVEEKSAVDLTPIVVEDKEEKKEEEEKKE 1691
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 1312 (466.9 bits), Expect = 8.7e-156, Sum P(4) = 8.7e-156
Identities = 270/528 (51%), Positives = 363/528 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D+QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ++ L L
Sbjct: 548 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 607
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GP+LV PLST+ NW +EF W P V+ Y G + SR V ++ EF + D
Sbjct: 608 EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 667
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KKV R IKF+ LLT+YE++ D+A+L I+W L+VDEAHRLKN++++ + L+
Sbjct: 668 GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 727
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 728 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 785
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+S +QK+YYK+IL RNF LN GNQVSL
Sbjct: 786 LLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSL 845
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A N + ++ SSGKL++L K+L +L +
Sbjct: 846 LNIMMDLKKCCNHPYLFPVA--AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEG 903
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 904 HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST 963
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I +
Sbjct: 964 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ 1023
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED 677
AK+KM+L HLV++ S KQ EL IL+FG EELFK+D
Sbjct: 1024 VAKRKMMLTHLVVRPGLGSKSGSMTKQ----ELDDILKFGTEELFKDD 1067
Score = 141 (54.7 bits), Expect = 8.7e-156, Sum P(4) = 8.7e-156
Identities = 55/173 (31%), Positives = 77/173 (44%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKK--VVEDVRFRKMVSREEIE 68
E EF +KW G S+ HC W ELQ L + V+ NY +K + E F S +E
Sbjct: 371 EREFFVKWAGLSYWHCSWVK--ELQ-LELYHTVMYRNYQRKNDMDEPPPF-DYGSGDEDG 426
Query: 69 LNDVSKEMDLDIIKQNSQVER-------IIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
++ K D K + R ++ RI S D G+V YL+KWK L Y +
Sbjct: 427 KSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDV--HYLIKWKDLPYDQ 484
Query: 119 ATWEKDEI-IDFAQDAIDEYKA-REAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
TWE D+I I + + Y RE + E ++ KKGK E+P
Sbjct: 485 CTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKP 537
Score = 73 (30.8 bits), Expect = 8.7e-156, Sum P(4) = 8.7e-156
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ H +L R
Sbjct: 1594 WHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEI-HKGNYLEMKNKFLARRFK 1652
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1653 LLEQAL 1658
Score = 65 (27.9 bits), Expect = 8.5e-148, Sum P(4) = 8.5e-148
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATWEKD 124
K G +E+ VKW GLSY +W K+
Sbjct: 364 KPLEGIPEREFFVKWAGLSYWHCSWVKE 391
Score = 53 (23.7 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 27/92 (29%), Positives = 38/92 (41%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ + D +QN LSSF + + + R IIK E P
Sbjct: 1124 AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW 1183
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1184 EKLLRHHYEQQQED-----LARN---LGKGKR 1207
Score = 45 (20.9 bits), Expect = 7.6e-153, Sum P(4) = 7.6e-153
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 1066 RVEQ--PL-TKEEGEMSDNEEVYEQFK--EVKWMEWCEDVMADEIRTL-QRLQRLQATSD 1119
RVE+ P+ T++ G+ D+EE ++ K + K+M D E+ TL Q +R +S
Sbjct: 1529 RVEEKEPIETQQNGDKEDDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSG 1588
Query: 1120 NL 1121
+
Sbjct: 1589 KI 1590
Score = 42 (19.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL + Q++ +K
Sbjct: 776 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSQMQKKYYK 824
Score = 41 (19.5 bits), Expect = 8.7e-156, Sum P(4) = 8.7e-156
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 717 SAFKVANFCGAEDDG 731
S+FKVA + E+DG
Sbjct: 1149 SSFKVAQYVVREEDG 1163
Score = 39 (18.8 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 397 RRIIKDVEKSLPPKIERI 414
R++ D +K LPP + R+
Sbjct: 1261 RQLKSDRDKPLPPLLARV 1278
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 1321 (470.1 bits), Expect = 8.9e-156, Sum P(4) = 8.9e-156
Identities = 272/532 (51%), Positives = 367/532 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QPE+L GG L YQ+EGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 732 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 791
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GPFLV PLST+ NW +EF W P M V+ YVG + SR + ++ EF + D
Sbjct: 792 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 851
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KK R +KF+ LLT+YE++ D A+L I W L+VDEAHRLKN++++ + L+
Sbjct: 852 GKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 911
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+S ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + +++ E+++ LH
Sbjct: 912 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK--EDQIKKLHD 969
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 970 MLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSL 1029
Query: 450 LNIVVELKKCCNHPFLFE-SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LN+V++LKKCCNHP+LF +A + D S L R +SGKL++L K+L L E
Sbjct: 1030 LNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIR---ASGKLLLLQKMLKNLKEG 1086
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ ++G++++R+DG +R +A+D FNAPG++ FCFLLS
Sbjct: 1087 GHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLS 1146
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I
Sbjct: 1147 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERIT 1206
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRND 680
+ AKKKM+L HLV++ + KQ EL IL+FG EELFK++ D
Sbjct: 1207 QVAKKKMMLTHLVVRPGLGSKTGSMSKQ----ELDDILKFGTEELFKDEATD 1254
Score = 158 (60.7 bits), Expect = 8.9e-156, Sum P(4) = 8.9e-156
Identities = 52/169 (30%), Positives = 80/169 (47%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK--VVE----DVRFRKMVSREE 66
E +F +KW+G S+ HC W S +L+ L NY +K + E D + SR+
Sbjct: 561 ERQFFVKWQGMSYWHCSWVSELQLE-LHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKR 619
Query: 67 IELNDVSKEMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEATWEK 123
+ EM+ + + E ++ RI S D G+V YL+KW+ L Y +A+WE
Sbjct: 620 KNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV--HYLIKWRDLPYDQASWES 677
Query: 124 D--EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+ EI D+ + RE E+G+ +K K LRKL+ PE
Sbjct: 678 EDVEIQDYDLFKQSYWNHRELMRGEEGRP---GKKLKKVKLRKLERPPE 723
Score = 70 (29.7 bits), Expect = 8.9e-156, Sum P(4) = 8.9e-156
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ + FL R
Sbjct: 1766 WHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEM-NRGNFLEIKNKFLARRFK 1824
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1825 LLEQAL 1830
Score = 60 (26.2 bits), Expect = 1.8e-145, Sum P(4) = 1.8e-145
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATW 121
K G +++ VKW+G+SY +W
Sbjct: 554 KPLEGRPERQFFVKWQGMSYWHCSW 578
Score = 43 (20.2 bits), Expect = 8.9e-156, Sum P(4) = 8.9e-156
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 816 GNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV 875
G++SK++ ++KFG + A D GG V+ D I+ + +
Sbjct: 1229 GSMSKQELDD----ILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQD 1284
Query: 876 GSPDPKGPPLLDFFGVSVKANDLINRVEEL 905
+ D + + ++ S K + R EE+
Sbjct: 1285 ETEDTELQGMNEYLS-SFKVAQYVVREEEM 1313
Score = 42 (19.8 bits), Expect = 3.6e-150, Sum P(3) = 3.6e-150
Identities = 17/91 (18%), Positives = 37/91 (40%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEM 1078
K +++ ++IL L +D+ G + + + + +E+ L + + E
Sbjct: 1227 KTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDET 1286
Query: 1079 SDNE-----EVYEQFKEVKWMEWCEDVMADE 1104
D E E FK +++ E+ M +E
Sbjct: 1287 EDTELQGMNEYLSSFKVAQYVVR-EEEMGEE 1316
Score = 41 (19.5 bits), Expect = 1.4e-155, Sum P(4) = 1.4e-155
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 675 KEDRNDEESKKRLL 688
KE++ +EE KK +L
Sbjct: 1697 KEEKKEEEEKKEVL 1710
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 13/74 (17%), Positives = 35/74 (47%)
Query: 374 KNLSSFNENELANLHMELRPH-ILRRIIKDVEKSLPPKIER-ILRVEMSPLQKQYYKWIL 431
+N + EL ++ L + + ++++ E ++ER I++ E S + Y++ +L
Sbjct: 1281 RNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEES-VDPDYWEKLL 1339
Query: 432 ERNFHDLNKGVRGN 445
++ + + N
Sbjct: 1340 RHHYEQQQEDLARN 1353
Score = 40 (19.1 bits), Expect = 8.8e-07, Sum P(4) = 8.8e-07
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 960 KEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRV--ELSPMQKKYYK 1008
Score = 37 (18.1 bits), Expect = 3.8e-155, Sum P(4) = 3.8e-155
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 751 APRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
AP A + K+ AE E E ++ + +EP E K
Sbjct: 1636 AP-APEDDKAPAEPPEGEEKVEKAEVKERAEEPMETESK 1673
Score = 37 (18.1 bits), Expect = 2.6e-152, Sum P(4) = 2.6e-152
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 1048 GSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEV 1084
G KV K+R +P E T E + + V
Sbjct: 1651 GEEKVEKAEVKERAEEPMETESKGTTEVEKAEEKSAV 1687
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 1312 (466.9 bits), Expect = 3.7e-155, Sum P(4) = 3.7e-155
Identities = 270/528 (51%), Positives = 363/528 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D+QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ++ L L
Sbjct: 617 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 676
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GP+LV PLST+ NW +EF W P V+ Y G + SR V ++ EF + D
Sbjct: 677 EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 736
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KKV R IKF+ LLT+YE++ D+A+L I+W L+VDEAHRLKN++++ + L+
Sbjct: 737 GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 796
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 797 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 854
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+S +QK+YYK+IL RNF LN GNQVSL
Sbjct: 855 LLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSL 914
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A N + ++ SSGKL++L K+L +L +
Sbjct: 915 LNIMMDLKKCCNHPYLFPVA--AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEG 972
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 973 HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST 1032
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I +
Sbjct: 1033 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ 1092
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED 677
AK+KM+L HLV++ S KQ EL IL+FG EELFK+D
Sbjct: 1093 VAKRKMMLTHLVVRPGLGSKSGSMTKQ----ELDDILKFGTEELFKDD 1136
Score = 143 (55.4 bits), Expect = 3.7e-155, Sum P(4) = 3.7e-155
Identities = 55/173 (31%), Positives = 76/173 (43%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKK--VVEDVRFRKMVSREEIE 68
E EF +KW G S+ HC W ELQ L + V+ NY +K + E F S +E
Sbjct: 440 EREFFVKWAGLSYWHCSWVK--ELQ-LELYHTVMYRNYQRKNDMDEPPPF-DYGSGDEDS 495
Query: 69 LNDVSKEMDLDIIKQNSQVER-------IIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
++ K D K + R ++ RI S D G+V YL+KWK L Y +
Sbjct: 496 KSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDV--HYLIKWKDLPYDQ 553
Query: 119 ATWEKDEI-IDFAQDAIDEYKA-REAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
TWE D+I I + Y RE + E ++ KKGK E+P
Sbjct: 554 CTWEIDDIDIPYYDSLKQAYWGHRELMLGEDARLPKRLVKKGKKLRDDKQEKP 606
Score = 65 (27.9 bits), Expect = 3.7e-155, Sum P(4) = 3.7e-155
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDER 967
W++ D LL GI HG+ W++I+ D R
Sbjct: 1664 WHRRHDYWLLAGIVTHGYARWQDIQNDPR 1692
Score = 65 (27.9 bits), Expect = 5.9e-147, Sum P(4) = 5.9e-147
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATWEKD 124
K G +E+ VKW GLSY +W K+
Sbjct: 433 KPLEGIPEREFFVKWAGLSYWHCSWVKE 460
Score = 53 (23.7 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 27/92 (29%), Positives = 38/92 (41%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ + D +QN LSSF + + + R IIK E P
Sbjct: 1193 AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW 1252
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1253 EKLLRHHYEQQQED-----LARN---LGKGKR 1276
Score = 42 (19.8 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL + Q++ +K
Sbjct: 845 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSQMQKKYYK 893
Score = 41 (19.5 bits), Expect = 3.7e-155, Sum P(4) = 3.7e-155
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 717 SAFKVANFCGAEDDG 731
S+FKVA + E+DG
Sbjct: 1218 SSFKVAQYVVREEDG 1232
Score = 40 (19.1 bits), Expect = 1.6e-152, Sum P(4) = 1.6e-152
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 1108 LQRLQRLQATSDNLPKEKV 1126
L+ ++ Q + + LPKE+V
Sbjct: 1550 LEEAEKAQPSPEQLPKEEV 1568
Score = 40 (19.1 bits), Expect = 2.5e-144, Sum P(4) = 2.5e-144
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 112 KGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKK 157
KG S E E++E DF +I R A GK +RKK
Sbjct: 219 KGSSSEED--EREES-DFDSASIHSSSVRSECSAALGKKSKRRRKK 261
Score = 39 (18.8 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 397 RRIIKDVEKSLPPKIERI 414
R++ D +K LPP + R+
Sbjct: 1330 RQLKSDRDKPLPPLLARV 1347
Score = 38 (18.4 bits), Expect = 2.6e-152, Sum P(4) = 2.6e-152
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 1057 TKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTL-QRLQRLQ 1115
TK +P +Q KEE E E+ +FK +M D E+ TL Q +R
Sbjct: 1598 TKAEEKEPIETQQNGDKEEDEEGKKEDRNGKFK---FMFNIADGGFTELHTLWQNEERAA 1654
Query: 1116 ATSDNL 1121
+S +
Sbjct: 1655 VSSGKI 1660
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 1311 (466.6 bits), Expect = 2.2e-153, Sum P(4) = 2.2e-153
Identities = 270/528 (51%), Positives = 363/528 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D+QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ++ L L
Sbjct: 683 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 742
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GP+LV PLST+ NW +EF W P V+ Y G + SR V ++ EF + D
Sbjct: 743 EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRG 802
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KKV R IKF+ LLT+YE++ D+A+L I+W L+VDEAHRLKN++++ + L+
Sbjct: 803 GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 862
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 863 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 920
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+S +QK+YYK+IL RNF LN GNQVSL
Sbjct: 921 LLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSL 980
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A N + ++ SSGKL++L K+L +L +
Sbjct: 981 LNIMMDLKKCCNHPYLFPVA--AVEAPMLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEG 1038
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 1039 HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST 1098
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I +
Sbjct: 1099 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ 1158
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED 677
AK+KM+L HLV++ S KQ EL IL+FG EELFK+D
Sbjct: 1159 VAKRKMMLTHLVVRPGLGSKSGSMTKQ----ELDDILKFGTEELFKDD 1202
Score = 145 (56.1 bits), Expect = 2.2e-153, Sum P(4) = 2.2e-153
Identities = 56/173 (32%), Positives = 77/173 (44%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKK--VVEDVRFRKMVSREEIE 68
E EF +KW G S+ HC W ELQ L + V+ NY +K + E F S +E
Sbjct: 506 EREFFVKWAGLSYWHCSWVK--ELQ-LELYHTVMYRNYQRKNDMDEPPPF-DYGSGDEDG 561
Query: 69 LNDVSKEMDLDIIKQNSQVER-------IIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
++ K D K + R ++ RI S D G+V YL+KWK L Y +
Sbjct: 562 KSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDV--HYLIKWKDLPYDQ 619
Query: 119 ATWEKDEI-IDFAQDAIDEYKA-REAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
TWE DEI I + + Y RE + E ++ KKGK E+P
Sbjct: 620 CTWEIDEIDIPYYDNLKQTYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKP 672
Score = 72 (30.4 bits), Expect = 2.2e-153, Sum P(4) = 2.2e-153
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ H +L R
Sbjct: 1730 WHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEV-HKGNYLEMKNKFLARRFK 1788
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1789 LLEQAL 1794
Score = 52 (23.4 bits), Expect = 2.8e-151, Sum P(4) = 2.8e-151
Identities = 28/113 (24%), Positives = 52/113 (46%)
Query: 1019 KASKKGREKSENILNMPISRLKR----DKKGKPGSAKVNFQTTKD-RFHKPQRVE-QPL- 1071
+A ++ E+ E P LK DK+ P +++ + D R P+ E +P
Sbjct: 1614 RAREERMEEVEKAQGSPEQPLKEETLPDKEPVPDKLELSLSHSNDFRPDDPKAEEKEPTE 1673
Query: 1072 TKEEGEMSDNEEVYEQFK--EVKWMEWCEDVMADEIRTL-QRLQRLQATSDNL 1121
T++ G+ ++EE ++ K + K+M D E+ TL Q +R +S +
Sbjct: 1674 TQQNGDREEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKI 1726
Score = 52 (23.4 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 26/92 (28%), Positives = 38/92 (41%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ + D +QN LSSF + + + R +IK E P
Sbjct: 1259 AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDYW 1318
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1319 EKLLRHHYEQQQED-----LARN---LGKGKR 1342
Score = 47 (21.6 bits), Expect = 4.5e-143, Sum P(4) = 4.5e-143
Identities = 18/83 (21%), Positives = 41/83 (49%)
Query: 124 DEIIDFAQDAID--EYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQ 181
DE+ + +D + E + + + ++ K ++K+ KA +K DE E G L++ +
Sbjct: 72 DELSENEEDLEEKSESEGSDYSPTKKKKKKLKEKKEKKAKRKKRDEDEEDNEDGGLKEPK 131
Query: 182 LEGLNFLVNSWR-NDTNVILADE 203
G L+ W +D + + +++
Sbjct: 132 SSGQ--LMAEWGLDDVDYLFSED 152
Score = 42 (19.8 bits), Expect = 2.2e-153, Sum P(4) = 2.2e-153
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 717 SAFKVANFCGAEDDGSFWSRWIKPEAVAQAED 748
S+FKVA + E+DG ++ E + Q E+
Sbjct: 1284 SSFKVAQYVVREEDGV---EEVEREVIKQEEN 1312
Score = 42 (19.8 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL + Q++ +K
Sbjct: 911 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSQMQKKYYK 959
Score = 40 (19.1 bits), Expect = 5.2e-150, Sum P(4) = 5.2e-150
Identities = 12/51 (23%), Positives = 20/51 (39%)
Query: 1267 EPIHKGIDPKKFEAWKRRRRAETDMYSQAQPMLQRPMNNGTRLPDPNSLGI 1317
E H+ D K +R E S QP+ + + + +PD L +
Sbjct: 1603 EDKHQSSDSKDRAREERMEEVEKAQGSPEQPLKEETLPDKEPVPDKLELSL 1653
Score = 39 (18.8 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 397 RRIIKDVEKSLPPKIERI 414
R++ D +K LPP + R+
Sbjct: 1396 RQLKSDRDKPLPPLLARV 1413
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 1314 (467.6 bits), Expect = 4.4e-153, Sum P(3) = 4.4e-153
Identities = 281/588 (47%), Positives = 380/588 (64%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D+QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ++ L L
Sbjct: 631 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 690
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GP+LV PLST+ NW +EF W P V+ Y G + SR V ++ EF + D
Sbjct: 691 EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 750
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KKV R IKF+ LLT+YE++ D+A+L I+W L+VDEAHRLKN++++ + L+
Sbjct: 751 GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 810
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 811 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 868
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+S +QK+YYK+IL RNF LN GNQVSL
Sbjct: 869 LLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSL 928
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A N + ++ SSGKL++L K+L +L +
Sbjct: 929 LNIMMDLKKCCNHPYLFPVA--AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEG 986
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 987 HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST 1046
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I +
Sbjct: 1047 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ 1106
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED---RNDEESKKR 686
AK+KM+L HLV++ S KQ EL IL+FG EELFK+D N +
Sbjct: 1107 VAKRKMMLTHLVVRPGLGSKSGSMTKQ----ELDDILKFGTEELFKDDVEGDNKDVEDSS 1162
Query: 687 LLGMDIDXXXXXXXXXXXXXXXXXXXXXXX---SAFKVANFCGAEDDG 731
++ D D S+FKVA + E+DG
Sbjct: 1163 VIHYD-DAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDG 1209
Score = 152 (58.6 bits), Expect = 4.4e-153, Sum P(3) = 4.4e-153
Identities = 56/173 (32%), Positives = 76/173 (43%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKK--VVEDVRFRKMVSREEIE 68
E EF +KW G S+ HC W ELQ L + V+ NY +K + E F S +E
Sbjct: 453 EREFFVKWAGLSYWHCSWVK--ELQQLELYHTVMYRNYQRKNDMDEPPPF-DYGSGDEDG 509
Query: 69 LNDVSKEMDLDIIKQNSQVER-------IIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
++ K D K + R ++ RI S D G+V YL+KWK L Y +
Sbjct: 510 KSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDV--HYLIKWKDLPYDQ 567
Query: 119 ATWEKDEI-IDFAQDAIDEYKA-REAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
TWE DEI I + Y RE + E ++ KKGK E+P
Sbjct: 568 CTWEIDEIDIPYYDSLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKP 620
Score = 73 (30.8 bits), Expect = 4.4e-153, Sum P(3) = 4.4e-153
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ H +L R
Sbjct: 1628 WHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEI-HKGNYLEMKNKFLARRFK 1686
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1687 LLEQAL 1692
Score = 65 (27.9 bits), Expect = 6.5e-144, Sum P(3) = 6.5e-144
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATWEKD 124
K G +E+ VKW GLSY +W K+
Sbjct: 446 KPLEGIPEREFFVKWAGLSYWHCSWVKE 473
Score = 53 (23.7 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 27/92 (29%), Positives = 38/92 (41%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ + D +QN LSSF + + + R IIK E P
Sbjct: 1170 AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW 1229
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1230 EKLLRHHYEQQQED-----LARN---LGKGKR 1253
Score = 42 (19.8 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL + Q++ +K
Sbjct: 859 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSQMQKKYYK 907
Score = 41 (19.5 bits), Expect = 1.0e-149, Sum P(3) = 1.0e-149
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 1057 TKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTL-QRLQRLQ 1115
TK +P +Q KEE E E+ +FK +M D E+ TL Q +R
Sbjct: 1562 TKAEEKEPVETQQNGDKEEDEEGKKEDKIGKFK---FMFNIADGGFTELHTLWQNEERAA 1618
Query: 1116 ATSDNL 1121
+S +
Sbjct: 1619 VSSGKI 1624
Score = 41 (19.5 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 358 LDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIK-DVEKSLPPKIERI 414
++++ +D Q+ ++ S +E+E E RR +K D +K LPP + R+
Sbjct: 1258 VNYNDASQEDQDNQSEYSIGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARV 1315
Score = 40 (19.1 bits), Expect = 2.8e-141, Sum P(3) = 2.8e-141
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 112 KGLSY-AEATWEKDEI--IDFAQDAIDEYKAREAAMAEQGKMVDLQRKK 157
KG S A + E+DE DF +I R A GK +RKK
Sbjct: 217 KGSSVSASVSSEEDEREESDFDSASIHSSSMRSECSAALGKKSKRRRKK 265
Score = 39 (18.8 bits), Expect = 0.00092, Sum P(3) = 0.00092
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 1253 RQKGHKNVSTYQMTEPIHKGIDPKKFEAWKRRR 1285
R +GH+ + QMT+ + D ++E +K R
Sbjct: 983 RDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYER 1015
Score = 37 (18.1 bits), Expect = 5.8e-141, Sum P(3) = 5.8e-141
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 79 DIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYK 138
D + +N + ++ D S N ++ +K K A+ + DE D + E K
Sbjct: 3 DELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDDEEDDNEDGCLKEPK 62
Query: 139 AREAAMAEQG 148
+ MAE G
Sbjct: 63 SSGQLMAEWG 72
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 1310 (466.2 bits), Expect = 6.9e-153, Sum P(3) = 6.9e-153
Identities = 272/529 (51%), Positives = 364/529 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D+QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ++ L L
Sbjct: 616 KFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 675
Query: 222 AQ-QIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND---- 275
Q GP+LV PLST+ NW +EF W P V+ Y G + SR V ++ EF + D
Sbjct: 676 EQGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIR 735
Query: 276 --KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTL 328
KKV R IKF+ LLT+YE++ D+AVL I+W L+VDEAHRLKN++++ + L
Sbjct: 736 SGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVL 795
Query: 329 SEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLH 388
+ + KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 796 NSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLH 853
Query: 389 MELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVS 448
L PH+LRR+ DV K++P K E I+RVE+S +QK+YYK+IL RNF LN GNQVS
Sbjct: 854 DLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVS 913
Query: 449 LLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LLNI+++LKKCCNHP+LF A N + ++ SSGKL++L K+L +L +
Sbjct: 914 LLNIMMDLKKCCNHPYLFPVA--AVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDG 971
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLS
Sbjct: 972 GHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLS 1031
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I
Sbjct: 1032 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERIT 1091
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED 677
+ AK+KM+L HLV++ S KQ EL IL+FG EELFK+D
Sbjct: 1092 QVAKRKMMLTHLVVRPGLGSKSGSMTKQ----ELDDILKFGTEELFKDD 1136
Score = 153 (58.9 bits), Expect = 6.9e-153, Sum P(3) = 6.9e-153
Identities = 56/175 (32%), Positives = 81/175 (46%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKK--VVEDVRFRKMVSREEIE 68
E EF +KW G S+ HC W ELQ L + V+ NY +K + E F S +E
Sbjct: 439 EREFFVKWAGLSYWHCSWVK--ELQ-LELYHTVMYRNYQRKNDMDEPPAF-DYGSGDEDS 494
Query: 69 LNDVSKEMDLDIIKQNSQVER-------IIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
+ K D K + R ++ RI S D G++ YL+KWK L Y +
Sbjct: 495 QREKRKNKDPHYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDI--HYLIKWKDLPYDQ 552
Query: 119 ATWEKDEI-IDFAQDA-IDEYKAREAAMAEQGKMVDLQRKKGKA-SLRKLDEQPE 170
TWE DEI I + ++ + + RE + E + + KKGK KL++ PE
Sbjct: 553 CTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPE 607
Score = 65 (27.9 bits), Expect = 6.9e-153, Sum P(3) = 6.9e-153
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDER 967
W++ D LL GI HG+ W++I+ D R
Sbjct: 1656 WHRRHDYWLLAGIVTHGYARWQDIQNDPR 1684
Score = 64 (27.6 bits), Expect = 1.7e-143, Sum P(3) = 1.7e-143
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 95 ISKDSSGNVTQEYLVKWKGLSYAEATWEKD 124
+ K G +E+ VKW GLSY +W K+
Sbjct: 430 LPKVLEGIPEREFFVKWAGLSYWHCSWVKE 459
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 11/72 (15%), Positives = 33/72 (45%)
Query: 374 KNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILER 433
+N + ++ EL N++ L + + + E + ++ER + + + Y++ +L
Sbjct: 1166 RNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVQEEVEREIIKQEENVDPDYWEKLLRH 1225
Query: 434 NFHDLNKGVRGN 445
++ + + N
Sbjct: 1226 HYEQQQEDLARN 1237
Score = 42 (19.8 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL + Q++ +K
Sbjct: 845 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSQMQKKYYK 893
Score = 41 (19.5 bits), Expect = 4.4e-141, Sum P(3) = 4.4e-141
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 112 KGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKK 157
KG S E E++E DF +I+ R A GK +RKK
Sbjct: 217 KGSSSEEE--EREES-DFDSASINSSSVRSECSAGLGKRGKRRRKK 259
Score = 41 (19.5 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 366 KDDFIQNYKNLSSFNENELANLHMELRPH----ILRRIIK-DVEKSLPPKIERI 414
+D+ N S +E+E + E RP RR +K D +K LPP + R+
Sbjct: 1261 QDELSDNQSEYSIGSEDE--DEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARV 1312
Score = 38 (18.4 bits), Expect = 4.9e-150, Sum P(3) = 4.9e-150
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 1214 KLKQERQEE 1222
KLK+E+QEE
Sbjct: 1549 KLKEEKQEE 1557
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 1289 (458.8 bits), Expect = 9.3e-153, Sum P(4) = 9.3e-153
Identities = 275/556 (49%), Positives = 371/556 (66%)
Query: 147 QGKMVDLQRKKGKASLR---KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILA 201
+GKM L R + K + QP++L GG L YQLEGLN+L SW T+ ILA
Sbjct: 675 KGKMRKLDRPPENPVVDPTIKFERQPDYLDTTGGTLHPYQLEGLNWLRFSWAQGTDTILA 734
Query: 202 DEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTR 261
DEMGLGKTVQ+ L L GPFLV PLST+ NW +EF W P M V+ YVG +
Sbjct: 735 DEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 794
Query: 262 ASREVCQQYEFY--ND-----KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYL 309
SR V ++ EF N+ KK + +KF+ LLT+YE++ D AVL I W L
Sbjct: 795 DSRAVIRENEFSFENNAIRGGKKPSKMKKEASVKFHVLLTSYELITIDTAVLGSIDWACL 854
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
+VDEAHRLKN++++ + L+ + ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F
Sbjct: 855 VVDEAHRLKNNQSKFFRILNNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFSNLEGF 914
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
++ + +++ E+++ LH L PH+LRR+ DV K +P K E I+RVE+SP+QK+YYK+
Sbjct: 915 LEEFADIAK--EDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKF 972
Query: 430 ILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERII 489
IL RNF LN GNQVSLLN+V++LKKCCNHP+LF +A N + +
Sbjct: 973 ILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPAA--AMEAAKMPNGMYEGGGLT 1030
Query: 490 LSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRH 549
SSGKL++L K+L +L E HRVLIFSQM +MLD+L +++ +G++++R+DG +R
Sbjct: 1031 KSSGKLLLLQKMLRKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQ 1090
Query: 550 QAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQ 609
+A+D FNAPG+ F FLLSTRAGGLGINLATADTV+I+DSDWNP ND+QA SRAHRIGQ
Sbjct: 1091 EAIDRFNAPGAPQFVFLLSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQN 1150
Query: 610 EVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFG 669
+ V IYRFVT SVEE I + AKKKM+L HLV++ + KQ EL IL+FG
Sbjct: 1151 KKVMIYRFVTKASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQ----ELDDILKFG 1206
Query: 670 AEELFKEDRNDEESKK 685
EELFK D + E+K+
Sbjct: 1207 TEELFK-DEGEGENKE 1221
Score = 160 (61.4 bits), Expect = 9.3e-153, Sum P(4) = 9.3e-153
Identities = 53/173 (30%), Positives = 84/173 (48%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKKV-VEDVRFRKMVSREEIEL 69
E EF +KW+ S+ HC W + ELQ L +V+ NY +K +++ E E
Sbjct: 521 EREFFVKWQNMSYWHCSWVT--ELQ-LEIHCQVMFRNYQRKNDMDEPPPIDFGGEGEEEK 577
Query: 70 NDVSKEMDLDIIKQNSQ-------VERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEA 119
+D K+ D + + +E ++ RI S D N YL+KW+ L+Y +A
Sbjct: 578 SDKRKKKDPTYARMEEKYYRFGIKMEWMVIHRILNHSVDKKNNC--HYLIKWRDLTYDQA 635
Query: 120 TWEKDE--IIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
TWE ++ + D+ + + RE M ++GK + KGK +RKLD PE
Sbjct: 636 TWELEDMDLPDYDTYKLQYWNHRELMMGDEGKPGKKIKIKGK--MRKLDRPPE 686
Score = 71 (30.1 bits), Expect = 9.3e-153, Sum P(4) = 9.3e-153
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ + FL R
Sbjct: 1749 WHRRHDYWLLAGIIQHGYARWQDIQNDVRFAILNEPFKGEI-NRGNFLEIKNKFLARRFK 1807
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1808 LLEQAL 1813
Score = 56 (24.8 bits), Expect = 7.9e-142, Sum P(4) = 7.9e-142
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 100 SGNVTQEYLVKWKGLSYAEATW 121
+G +E+ VKW+ +SY +W
Sbjct: 517 AGRPEREFFVKWQNMSYWHCSW 538
Score = 54 (24.1 bits), Expect = 4.7e-148, Sum P(3) = 4.7e-148
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHK----PQRVEQ-PLTK 1073
KA K EK E S K D KP ++ + +T+ + K P++++ P+T
Sbjct: 1612 KADGKQEEKEEENAKSGDSEEKTDDTDKPKGSEADKETSDAKGEKKDDEPEKMDTTPVTD 1671
Query: 1074 EEGEMSDNEE 1083
E+ D ++
Sbjct: 1672 EKKGQKDEKD 1681
Score = 51 (23.0 bits), Expect = 1.9e-08, Sum P(4) = 1.9e-08
Identities = 27/93 (29%), Positives = 39/93 (41%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENE-LANLHMELRPHILRRIIKDVEKSLPPK 410
A+ LD ++ + D +Q+ LSSF + + E + R IIK E P
Sbjct: 1235 AIDRLLDRNQDATDDTELQSMNEYLSSFKVAQYVVKDEEEAEEEVQREIIKQEESVDPDY 1294
Query: 411 IERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1295 WEKLLRHHYEQQQED-----LARN---LGKGKR 1319
Score = 46 (21.3 bits), Expect = 9.3e-153, Sum P(4) = 9.3e-153
Identities = 19/78 (24%), Positives = 32/78 (41%)
Query: 747 EDALAPRAARNTKSYAEANE--PERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFID 804
ED A A+ + E E PE S++ +K + +E +E K +E
Sbjct: 1582 EDGRAASASEEKEKGKEEKEKTPESSSEAEKADGKQEEKEEENAKSGDSEEKTDDTDKPK 1641
Query: 805 GASAQVRDWSYGNLSKRD 822
G+ A ++ S K+D
Sbjct: 1642 GSEAD-KETSDAKGEKKD 1658
Score = 46 (21.3 bits), Expect = 8.9e-141, Sum P(4) = 8.9e-141
Identities = 22/125 (17%), Positives = 55/125 (44%)
Query: 1 MSHLFDSEPDWNEMEFLIKWKGQSHLHCQWK-SFAELQNLSGFK-KVLNYAKKVVEDVRF 58
++H D + N +LIKW+ ++ W+ +L + +K + N+ + ++ D
Sbjct: 611 LNHSVDKK---NNCHYLIKWRDLTYDQATWELEDMDLPDYDTYKLQYWNHRELMMGDEGK 667
Query: 59 RKMVSREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVK---WKGLS 115
+ + ++ + + + ++ + ER D + D++G Y ++ W S
Sbjct: 668 PGKKIKIKGKMRKLDRPPENPVVDPTIKFERQ-PDYL--DTTGGTLHPYQLEGLNWLRFS 724
Query: 116 YAEAT 120
+A+ T
Sbjct: 725 WAQGT 729
Score = 43 (20.2 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 361 DKFKSKDDF-IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
D+ + D+ + + + F+E AN RP+ + + D +K LPP + R+
Sbjct: 1339 DQSDGQSDYSVASEEGDEDFDERSEANSR---RPN-RKGLRNDKDKPLPPLLARV 1389
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 1312 (466.9 bits), Expect = 1.0e-152, Sum P(4) = 1.0e-152
Identities = 270/528 (51%), Positives = 363/528 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D+QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ++ L L
Sbjct: 685 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 744
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GP+LV PLST+ NW +EF W P V+ Y G + SR V ++ EF + D
Sbjct: 745 EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 804
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KKV R IKF+ LLT+YE++ D+A+L I+W L+VDEAHRLKN++++ + L+
Sbjct: 805 GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 864
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 865 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 922
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+S +QK+YYK+IL RNF LN GNQVSL
Sbjct: 923 LLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSL 982
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A N + ++ SSGKL++L K+L +L +
Sbjct: 983 LNIMMDLKKCCNHPYLFPVA--AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEG 1040
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 1041 HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST 1100
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I +
Sbjct: 1101 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ 1160
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED 677
AK+KM+L HLV++ S KQ EL IL+FG EELFK+D
Sbjct: 1161 VAKRKMMLTHLVVRPGLGSKSGSMTKQ----ELDDILKFGTEELFKDD 1204
Score = 140 (54.3 bits), Expect = 1.0e-152, Sum P(4) = 1.0e-152
Identities = 55/173 (31%), Positives = 77/173 (44%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKK--VVEDVRFRKMVSREEIE 68
E EF +KW G S+ HC W ELQ L + V+ NY +K + E F S +E
Sbjct: 508 EREFFVKWAGLSYWHCSWVK--ELQ-LELYHTVMYRNYQRKNDMDEPPPF-DYGSGDEDG 563
Query: 69 LNDVSKEMDLDIIKQNSQVER-------IIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
++ K D K + R ++ RI S D G+V YL+KWK L Y +
Sbjct: 564 KSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDV--HYLIKWKDLPYDQ 621
Query: 119 ATWEKDEI-IDFAQDAIDEYKA-REAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
TWE D+I I + + Y RE + E ++ KKGK E+P
Sbjct: 622 CTWEIDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKP 674
Score = 72 (30.4 bits), Expect = 1.0e-152, Sum P(4) = 1.0e-152
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ H +L R
Sbjct: 1736 WHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEV-HKGNYLEMKNKFLARRFK 1794
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1795 LLEQAL 1800
Score = 65 (27.9 bits), Expect = 7.8e-145, Sum P(4) = 7.8e-145
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATWEKD 124
K G +E+ VKW GLSY +W K+
Sbjct: 501 KPLEGIPEREFFVKWAGLSYWHCSWVKE 528
Score = 53 (23.7 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 27/92 (29%), Positives = 38/92 (41%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ + D +QN LSSF + + + R IIK E P
Sbjct: 1261 AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW 1320
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1321 EKLLRHHYEQQQED-----LARN---LGKGKR 1344
Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL + Q++ +K
Sbjct: 913 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSQMQKKYYK 961
Score = 41 (19.5 bits), Expect = 1.0e-152, Sum P(4) = 1.0e-152
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 717 SAFKVANFCGAEDDG 731
S+FKVA + E+DG
Sbjct: 1286 SSFKVAQYVVREEDG 1300
Score = 40 (19.1 bits), Expect = 3.3e-142, Sum P(4) = 3.3e-142
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 112 KGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKK 157
KG S E E++E DF +I R A GK +RKK
Sbjct: 287 KGSSSEED--EREES-DFDSASIHSASVRSECSAALGKKSKRRRKK 329
Score = 39 (18.8 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 397 RRIIKDVEKSLPPKIERI 414
R++ D +K LPP + R+
Sbjct: 1398 RQLKSDRDKPLPPLLARV 1415
Score = 38 (18.4 bits), Expect = 3.8e-149, Sum P(4) = 3.8e-149
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 1059 DRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQ 1112
DR + E P +KE EE + + + E+V+ ++ + L +L+
Sbjct: 1600 DRVESEDKHESPASKERAREERPEETEKAPPSPEQLPR-EEVLPEKEKILDKLE 1652
Score = 38 (18.4 bits), Expect = 3.8e-149, Sum P(4) = 3.8e-149
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 1049 SAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTL 1108
S+++ TK +P +Q KEE + E+ +FK +M D E+ TL
Sbjct: 1662 SSELRPDDTKAEEKEPIETQQNGDKEEDDEGKKEDKKGKFK---FMFNIADGGFTELHTL 1718
Query: 1109 -QRLQRLQATSDNL 1121
Q +R +S +
Sbjct: 1719 WQNEERAAVSSGKI 1732
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 1387 (493.3 bits), Expect = 2.5e-152, Sum P(6) = 2.5e-152
Identities = 331/872 (37%), Positives = 506/872 (58%)
Query: 14 MEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSRE-EIELN-D 71
+E L+KWK S++H W + K++N + +R ++ + + E E N D
Sbjct: 356 LEVLVKWKDLSYIHSSWIN----------SKLMNQTRS--SKMRLQRFIQKNIENEDNSD 403
Query: 72 VSKEMDLDIIKQNSQVERIIADR-ISKDSSG-NVTQEYLVKWKGLSYAEATWEKDEIIDF 129
+ ++ ++VE+++ R +S S+ ++YL+KWK +SY+ +TWE + DF
Sbjct: 404 LLVSSTQPSWEEFTEVEKVLDVRTVSVTSNKFKADKQYLIKWKSISYSLSTWEYQD--DF 461
Query: 130 AQDA-IDEY-KAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWL-RGGKLRDYQLEGLN 186
D I++Y K E M + ++ D R + + +K+D+ P++ +G KLR YQLEGLN
Sbjct: 462 KDDLKIEQYYKLNE--MPSKEELRDKPRPP-RTAWKKIDQSPDYFTKGNKLRPYQLEGLN 518
Query: 187 FLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFR 246
+L W N IL DEMGLGKTVQSVS+L L+ I GPFLVV PL+T+ +W +EF
Sbjct: 519 WLSFCWHEQRNSILGDEMGLGKTVQSVSILETLRKVHGIRGPFLVVAPLTTIPHWKREFE 578
Query: 247 KWLPTMNVIVYVGTRASREVCQQYEFY-NDKK----------VGRPIKFNTLLTTYEVVL 295
W MN +VY + A R +C+ YEFY DK G+ KFN L+TTYE+ +
Sbjct: 579 NWTD-MNALVYHDSGAGRPICRNYEFYLKDKDGGGGGASGGASGKITKFNVLITTYEMAI 637
Query: 296 KDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALL 355
D+ LS+I W YL++DEAHRLKN +L L +S + LL+TGTPLQN+ +ELW+LL
Sbjct: 638 TDRTHLSRIPWKYLVIDEAHRLKNKSCKLTIELRSYSFDHLLLLTGTPLQNNTQELWSLL 697
Query: 356 HFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERIL 415
+FLD +F + D F+ Y +L ++ E +L L+P++LRR+ + VEKS+ PK E I+
Sbjct: 698 NFLDPKQFSNLDQFLLEYGDLKESSQVE--SLQAILKPYLLRRMKERVEKSIAPKEETIV 755
Query: 416 RVEMSPLQKQYYKWILERNFHDLNKGVRGNQ-VSLLNIVVELKKCCNHPFLFESADHGYG 474
VE++ +QK+YY+ I E+NF L KG + NQ SLLNI++EL+KCCNHP+L + +
Sbjct: 756 EVELTTVQKKYYRAIYEKNFSFLRKGGKSNQGPSLLNIMMELRKCCNHPYLTKGVEQSE- 814
Query: 475 GDTSINDTSKL-ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKG 533
+SI D ++ +++I +SGKLV++DKLL +L H+VLIFSQMV +LDIL +Y++Y+G
Sbjct: 815 -TSSIKDKDQIFQKLIQASGKLVLIDKLLPKLKLGNHKVLIFSQMVSVLDILDDYLTYRG 873
Query: 534 FQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNP 593
+ +R+DGS K R A+D F+ P S+ F FLL TRAGG+GINL ADTVIIFDSDWNP
Sbjct: 874 YPHERIDGSIKGNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWNP 933
Query: 594 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA------ 647
QNDLQA +R HRIGQ ++V +YR VT + E + ++A KK+ LD V+ K+N+
Sbjct: 934 QNDLQAQARCHRIGQDKMVKVYRLVTKNTYERLMFDKASKKLGLDRAVLTKMNSLADSNN 993
Query: 648 ----EGSWRRKKQRKGNE-LSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXX 702
S K + E ++++L+FG + ++D+ S ++ DID
Sbjct: 994 GNNSSSSSTTKDELPDKETINSLLKFGVYAI----KDDDTSSEKFYEEDIDQILDRSLVV 1049
Query: 703 XXXXXXXXXXXXXXSAFKVANFCGAE-------DDGSFWSRWIKPEAVAQAEDALAPRAA 755
S+F A+FC + +D +FW ++ +PE + + L PR
Sbjct: 1050 KQETVGDPLA----SSFSTASFCSSSATTQIDVNDPNFWDKF-EPELNKKKDVILQPRQR 1104
Query: 756 RNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSY 815
+N + + + E S+ +++ S+ EP E R + I G ++ + W+
Sbjct: 1105 KNVQRFGTFKDHEESSDDEEQ-SDF-EPDEDDESTRDIG-GINGT--IGGQNSINKSWTA 1159
Query: 816 GNLSKRDATRFYRAVMKFGNQSQISLIARDAG 847
G +K + A++ +G+ S+ LI AG
Sbjct: 1160 GERNKLKS-----AMLAYGS-SRWDLIKTVAG 1185
Score = 75 (31.5 bits), Expect = 3.3e-148, Sum P(4) = 3.3e-148
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTK 972
W D LL+G + HGFG +E IR D L +K
Sbjct: 1421 WKSDKDNDLLIGTYKHGFGEYEMIRNDPTLSFSK 1454
Score = 66 (28.3 bits), Expect = 2.5e-152, Sum P(6) = 2.5e-152
Identities = 28/105 (26%), Positives = 46/105 (43%)
Query: 867 DGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLS 926
D E E G K P D + V+ +++R++ Q L + + +D + F+ L
Sbjct: 1692 DDLLEDDEKGGNIDKKPSGSDELSL-VQCKRVLSRIQFFQKLRNVVLKIKDLEEVFKNLP 1750
Query: 927 ---YLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERL 968
+ PS W G D LL G+ HG+ +E+I D+ L
Sbjct: 1751 SPYHGFPSWWKTGT-----HDISLLQGVSKHGYSQYEDICNDQSL 1790
Score = 47 (21.6 bits), Expect = 2.5e-152, Sum P(6) = 2.5e-152
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 765 NEPERSNKRKKKGSELQEPQERVHKRRK 792
N+ E+ +K +KK E ++ QE K+R+
Sbjct: 1518 NKLEKESKNEKKKIEKEKKQEEKLKKRQ 1545
Score = 45 (20.9 bits), Expect = 1.8e-148, Sum P(5) = 1.8e-148
Identities = 18/83 (21%), Positives = 34/83 (40%)
Query: 953 YHGFGNWENIRLDERLGLTKKIAPVELQHHETFL-PRAPNLKERANALLEMELXXXXXXX 1011
YHGF +W + + L + ++ +E ++ E A +L ++
Sbjct: 1753 YHGFPSWWKTGTHD-ISLLQGVSKHGYSQYEDICNDQSLPFHELAQSL-RLDKEKEKGSG 1810
Query: 1012 XXXXXXRKASKKGREKSENILNM 1034
AS K R++ ENIL++
Sbjct: 1811 GDSGVDDDASDKKRKRKENILDL 1833
Score = 44 (20.5 bits), Expect = 1.2e-150, Sum P(5) = 1.2e-150
Identities = 14/68 (20%), Positives = 31/68 (45%)
Query: 1225 IGPSHINGSASGSIDNDLNFSTFNRHAERQKG--HKNVSTYQMTEPIHKGIDPKKFEAWK 1282
+G S I+ ++ + +N +F+ FN + + N + Y + + +FE +K
Sbjct: 2285 MGNSSISYQSNNNNNNTNSFNNFNNNNNNNNNSNNSNDNNYNKNNNGYNKNNNNRFE-YK 2343
Query: 1283 RRRRAETD 1290
R + + D
Sbjct: 2344 RNSQIQDD 2351
Score = 39 (18.8 bits), Expect = 2.5e-152, Sum P(6) = 2.5e-152
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1297 PMLQRPMNNGTRLPDPNSLGILGAAPTDNR 1326
P + +NG+ PN LG + DNR
Sbjct: 2228 PSISSLSDNGSFFGLPNKLGPIPKPYRDNR 2257
Score = 38 (18.4 bits), Expect = 2.5e-152, Sum P(6) = 2.5e-152
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 819 SKRDATRFYRAVMKFG 834
+KR+ FYR + +G
Sbjct: 1552 TKREKDSFYRCITMYG 1567
Score = 38 (18.4 bits), Expect = 2.5e-152, Sum P(6) = 2.5e-152
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 1209 HQIYSKLKQERQEEAGIG-PSHINGSAS 1235
H++ L+ ++++E G G S ++ AS
Sbjct: 1793 HELAQSLRLDKEKEKGSGGDSGVDDDAS 1820
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 1314 (467.6 bits), Expect = 3.0e-152, Sum P(3) = 3.0e-152
Identities = 281/588 (47%), Positives = 380/588 (64%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D+QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ++ L L
Sbjct: 601 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 660
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GP+LV PLST+ NW +EF W P V+ Y G + SR V ++ EF + D
Sbjct: 661 EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 720
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KKV R IKF+ LLT+YE++ D+A+L I+W L+VDEAHRLKN++++ + L+
Sbjct: 721 GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 780
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 781 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 838
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+S +QK+YYK+IL RNF LN GNQVSL
Sbjct: 839 LLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSL 898
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A N + ++ SSGKL++L K+L +L +
Sbjct: 899 LNIMMDLKKCCNHPYLFPVA--AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEG 956
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 957 HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST 1016
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I +
Sbjct: 1017 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ 1076
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED---RNDEESKKR 686
AK+KM+L HLV++ S KQ EL IL+FG EELFK+D N +
Sbjct: 1077 VAKRKMMLTHLVVRPGLGSKSGSMTKQ----ELDDILKFGTEELFKDDVEGDNKDVEDSS 1132
Query: 687 LLGMDIDXXXXXXXXXXXXXXXXXXXXXXX---SAFKVANFCGAEDDG 731
++ D D S+FKVA + E+DG
Sbjct: 1133 VIHYD-DAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDG 1179
Score = 143 (55.4 bits), Expect = 3.0e-152, Sum P(3) = 3.0e-152
Identities = 55/173 (31%), Positives = 76/173 (43%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKK--VVEDVRFRKMVSREEIE 68
E EF +KW G S+ HC W ELQ L + V+ NY +K + E F S +E
Sbjct: 424 EREFFVKWAGLSYWHCSWVK--ELQ-LELYHTVMYRNYQRKNDMDEPPPF-DYGSGDEDS 479
Query: 69 LNDVSKEMDLDIIKQNSQVER-------IIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
++ K D K + R ++ RI S D G+V YL+KWK L Y +
Sbjct: 480 KSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDV--HYLIKWKDLPYDQ 537
Query: 119 ATWEKDEI-IDFAQDAIDEYKA-REAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
TWE D+I I + Y RE + E ++ KKGK E+P
Sbjct: 538 CTWEIDDIDIPYYDSLKQAYWGHRELMLGEDARLPKRLVKKGKKLRDDKQEKP 590
Score = 65 (27.9 bits), Expect = 3.0e-152, Sum P(3) = 3.0e-152
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDER 967
W++ D LL GI HG+ W++I+ D R
Sbjct: 1608 WHRRHDYWLLAGIVTHGYARWQDIQNDPR 1636
Score = 65 (27.9 bits), Expect = 4.9e-144, Sum P(3) = 4.9e-144
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATWEKD 124
K G +E+ VKW GLSY +W K+
Sbjct: 417 KPLEGIPEREFFVKWAGLSYWHCSWVKE 444
Score = 53 (23.7 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 27/92 (29%), Positives = 38/92 (41%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ + D +QN LSSF + + + R IIK E P
Sbjct: 1140 AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW 1199
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1200 EKLLRHHYEQQQED-----LARN---LGKGKR 1223
Score = 44 (20.5 bits), Expect = 4.9e-150, Sum P(3) = 4.9e-150
Identities = 25/95 (26%), Positives = 38/95 (40%)
Query: 1029 ENILNMPISRLKRDKKGKPGSA-KVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQ 1087
+ +L P+ LK K K+ TK +P +Q KEE E E+ +
Sbjct: 1513 KTLLMAPVGLLKEVLPEKEKILDKLETDDTKAEEKEPIETQQNGDKEEDEEGKKEDRNGK 1572
Query: 1088 FKEVKWMEWCEDVMADEIRTL-QRLQRLQATSDNL 1121
FK +M D E+ TL Q +R +S +
Sbjct: 1573 FK---FMFNIADGGFTELHTLWQNEERAAVSSGKI 1604
Score = 42 (19.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL + Q++ +K
Sbjct: 829 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSQMQKKYYK 877
Score = 40 (19.1 bits), Expect = 2.1e-141, Sum P(3) = 2.1e-141
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 112 KGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKK 157
KG S E E++E DF +I R A GK +RKK
Sbjct: 203 KGSSSEED--EREES-DFDSASIHSSSVRSECSAALGKKSKRRRKK 245
Score = 39 (18.8 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 397 RRIIKDVEKSLPPKIERI 414
R++ D +K LPP + R+
Sbjct: 1277 RQLKSDRDKPLPPLLARV 1294
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 1297 (461.6 bits), Expect = 5.0e-151, Sum P(4) = 5.0e-151
Identities = 267/536 (49%), Positives = 366/536 (68%)
Query: 164 KLDEQPEWLR--GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKT+Q++ L L
Sbjct: 717 KYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYK 776
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKV-- 278
GPFLV PLST+ NW +EF+ W P V+ Y G + SR + ++ EF + D +
Sbjct: 777 EGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKG 836
Query: 279 GRP---------IKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
G+ +KF+ LLT+YE++ D+A L I+W L+VDEAHRLKN++++ + L+
Sbjct: 837 GKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLN 896
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ +KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 897 GYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 954
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 955 LLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSL 1014
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A + + +I +SGKL++L K+L +L E
Sbjct: 1015 LNIMMDLKKCCNHPYLFPVA--AMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQG 1072
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNA G++ FCFLLST
Sbjct: 1073 HRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAHGAQQFCFLLST 1132
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVIIFDSDWNP ND+QA SRAHRIGQ V IYRFVT SVEE I +
Sbjct: 1133 RAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQ 1192
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
AK+KM+L HLV++ + KQ EL IL+FG EELFK D N+ E+K+
Sbjct: 1193 VAKRKMMLTHLVVRPGLGSKAGSMSKQ----ELDDILKFGTEELFK-DENEGENKE 1243
Score = 144 (55.7 bits), Expect = 5.0e-151, Sum P(4) = 5.0e-151
Identities = 54/163 (33%), Positives = 76/163 (46%)
Query: 12 NEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKKV-VEDVRFRKMVSREEIE 68
+E EF +KW G S+ HC W ELQ L F V+ NY +K +++ S E+
Sbjct: 542 SEREFFVKWVGLSYWHCSWAK--ELQ-LEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDG 598
Query: 69 LNDVSK-------EMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
+D K EM+ + + E + RI S D GN YLVKW+ L Y +
Sbjct: 599 KSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNY--HYLVKWRDLPYDQ 656
Query: 119 ATWEKDEI-IDFAQDAIDEY-KAREAAMAEQGKMVDLQRKKGK 159
+TWE+DE+ I +D Y + RE M E +KK K
Sbjct: 657 STWEEDEMNIPEYEDHKQSYWRHRELIMGEDPAQPRKYKKKKK 699
Score = 70 (29.7 bits), Expect = 5.0e-151, Sum P(4) = 5.0e-151
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHE-TFLPRAPNLKERAN 997
W++ D LL GI HG+ W++I+ D + + + P + + ++ FL R
Sbjct: 1738 WHRRHDYWLLAGIVLHGYARWQDIQNDAQFAIINE--PFKTEANKGNFLEMKNKFLARRF 1795
Query: 998 ALLEMEL 1004
LLE L
Sbjct: 1796 KLLEQAL 1802
Score = 66 (28.3 bits), Expect = 7.9e-143, Sum P(4) = 7.9e-143
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 101 GNVTQEYLVKWKGLSYAEATWEKD 124
G +E+ VKW GLSY +W K+
Sbjct: 540 GRSEREFFVKWVGLSYWHCSWAKE 563
Score = 61 (26.5 bits), Expect = 2.3e-07, Sum P(4) = 2.3e-07
Identities = 28/92 (30%), Positives = 39/92 (42%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ ++D +QN LSSF + + I R IIK E P
Sbjct: 1255 AIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYW 1314
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1315 EKLLRHHYEQQQED-----LARN---LGKGKR 1338
Score = 44 (20.5 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 358 LDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
++++ +D Q+ ++ S E+E + E R R++ + +K LPP + R+
Sbjct: 1343 VNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARV 1399
Score = 43 (20.2 bits), Expect = 5.0e-151, Sum P(4) = 5.0e-151
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 740 PEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQE 785
P + E L R R KS E+ ER ++ G E +E E
Sbjct: 1618 PGVPGEMEPELGYRGDRE-KSATESTPGERGEEKPMDGQEHRERPE 1662
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 945 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSPMQKKYYK 993
Score = 38 (18.4 bits), Expect = 6.9e-140, Sum P(4) = 6.9e-140
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 154 QRKKGKASLRKLDEQPE 170
+RKKG + + + DE PE
Sbjct: 298 KRKKGGSYVLQSDEGPE 314
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 766 EPERSNKRKKKGSELQ 781
+P + K KKK ELQ
Sbjct: 687 DPAQPRKYKKKKKELQ 702
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 1309 (465.8 bits), Expect = 1.3e-150, Sum P(3) = 1.3e-150
Identities = 269/536 (50%), Positives = 367/536 (68%)
Query: 164 KLDEQPEWLR--GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKT+Q++ L L
Sbjct: 677 KYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYK 736
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKV-- 278
GPFLV PLST+ NW +EF+ W P V+ Y G + SR + ++ EF + D +
Sbjct: 737 EGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKG 796
Query: 279 GRP---------IKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
G+ +KF+ LLT+YE++ D+A L I+W L+VDEAHRLKN++++ + L+
Sbjct: 797 GKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLN 856
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ +KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 857 GYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 914
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 915 LLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSL 974
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A + + +I SSGKL++L K+L +L E
Sbjct: 975 LNIMMDLKKCCNHPYLFPVA--AMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQG 1032
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 1033 HRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLST 1092
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVIIFDSDWNP ND+QA SRAHRIGQ V IYRFVT SVEE I +
Sbjct: 1093 RAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQ 1152
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
AK+KM+L HLV++ + KQ EL IL+FG EELFK D N+ E+K+
Sbjct: 1153 VAKRKMMLTHLVVRPGLGSKAGSMSKQ----ELDDILKFGTEELFK-DENEGENKE 1203
Score = 146 (56.5 bits), Expect = 1.3e-150, Sum P(3) = 1.3e-150
Identities = 55/163 (33%), Positives = 75/163 (46%)
Query: 12 NEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKKV-VEDVRFRKMVSREEIE 68
+E EF +KW G S+ HC W ELQ L F V+ NY +K +++ S E+
Sbjct: 502 SEREFFVKWVGLSYWHCSWAK--ELQ-LEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDG 558
Query: 69 LNDVSK-------EMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
+D K EM+ + + E + RI S D GN YLVKWK L Y +
Sbjct: 559 KSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNY--HYLVKWKDLPYDQ 616
Query: 119 ATWEKDEI-IDFAQDAIDEY-KAREAAMAEQGKMVDLQRKKGK 159
+TWE+DE+ I D Y + RE M E +KK K
Sbjct: 617 STWEEDEMNIPEYDDHKQSYWRHRELIMGEDPAQPRKYKKKKK 659
Score = 70 (29.7 bits), Expect = 1.3e-150, Sum P(3) = 1.3e-150
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHE-TFLPRAPNLKERAN 997
W++ D LL GI HG+ W++I+ D + + + P + + ++ FL R
Sbjct: 1663 WHRRHDYWLLAGIVLHGYARWQDIQNDAQFAIINE--PFKTEANKGNFLEMKNKFLARRF 1720
Query: 998 ALLEMEL 1004
LLE L
Sbjct: 1721 KLLEQAL 1727
Score = 66 (28.3 bits), Expect = 3.4e-142, Sum P(3) = 3.4e-142
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 101 GNVTQEYLVKWKGLSYAEATWEKD 124
G +E+ VKW GLSY +W K+
Sbjct: 500 GRSEREFFVKWVGLSYWHCSWAKE 523
Score = 59 (25.8 bits), Expect = 7.5e-08, Sum P(3) = 7.5e-08
Identities = 28/92 (30%), Positives = 38/92 (41%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ + D +QN LSSF + + I R IIK E P
Sbjct: 1215 AIARLLDRNQDATDDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYW 1274
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1275 EKLLRHHYEQQQED-----LARN---LGKGKR 1298
Score = 44 (20.5 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 358 LDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
++++ +D Q+ ++ S E+E + E R R++ + +K LPP + R+
Sbjct: 1303 VNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARV 1359
Score = 39 (18.8 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 905 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSPMQKKYYK 953
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 1283 (456.7 bits), Expect = 2.6e-150, Sum P(4) = 2.6e-150
Identities = 269/562 (47%), Positives = 369/562 (65%)
Query: 138 KAREAAMAEQGKMVDLQRKKGKASLRKLDE-QPEWLR--GGKLRDYQLEGLNFLVNSWRN 194
K REA + ++K+ K +RK E QP+++ GGKL YQLEGLN+L + W N
Sbjct: 560 KHREAKGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSN 619
Query: 195 DTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNV 254
T+ ILADEMGLGKTVQS++ L L GPFL+ PLST+ NW +E +W P V
Sbjct: 620 GTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYV 679
Query: 255 IVYVGTRASREVCQQYEFY------------NDKKVGRPIKFNTLLTTYEVVLKDKAVLS 302
+ YVG R +R V +++EF + K +KF+ LLT+YE + DK +LS
Sbjct: 680 VTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTILS 739
Query: 303 KIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDK 362
I+W L+VDEAHRLKN+++ + L+E++ ++L+TGTPLQN++EEL+ LL+FL ++
Sbjct: 740 SIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKER 799
Query: 363 FKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPL 422
F + F + +S E+++ LH L PH+LRR+ DV +P K E I+RVE+S +
Sbjct: 800 FNQLEAFTAEFNEISK--EDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAM 857
Query: 423 QKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDT 482
QK++YK IL RNF LN G Q+SL+N+++ELKKCCNHP+LF A+ N
Sbjct: 858 QKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAE--LEAPKEKNGM 915
Query: 483 SKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
+ +I +SGK V+L K+L +L + HRVLIFSQM RMLDI+ + Y+G++++R+DGS
Sbjct: 916 YEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGS 975
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
++R A+D +NAPG++ F FLLSTRAGGLGINLATADTVII+DSDWNP ND+QA SR
Sbjct: 976 IMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1035
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNEL 662
AHR+GQ+ V IYRFVT KSVEE I AKKKM+L+HLV++ G K K EL
Sbjct: 1036 AHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRA--GLGGKEGKTMSK-TEL 1092
Query: 663 SAILRFGAEELFKEDRNDEESK 684
+LR+G EELF ED + E +
Sbjct: 1093 DDVLRWGTEELFSEDLDAAEGE 1114
Score = 998 (356.4 bits), Expect = 1.7e-117, Sum P(4) = 1.7e-117
Identities = 216/471 (45%), Positives = 297/471 (63%)
Query: 277 KVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNK 336
K +KF+ LLT+YE + DK +LS I+W L+VDEAHRLKN+++ + L+E++ +
Sbjct: 714 KTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYR 773
Query: 337 LLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHIL 396
+L+TGTPLQN++EEL+ LL+FL ++F + F + +S E+++ LH L PH+L
Sbjct: 774 VLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISK--EDQIEKLHNLLGPHML 831
Query: 397 RRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVEL 456
RR+ DV +P K E I+RVE+S +QK++YK IL RNF LN G Q+SL+N+++EL
Sbjct: 832 RRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMEL 891
Query: 457 KKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFS 516
KKCCNHP+LF A+ N + +I +SGK V+L K+L +L + HRVLIFS
Sbjct: 892 KKCCNHPYLFVKAE--LEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFS 949
Query: 517 QMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGI 576
QM RMLDI+ + Y+G++++R+DGS ++R A+D +NAPG++ F FLLSTRAGGLGI
Sbjct: 950 QMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGI 1009
Query: 577 NLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMV 636
NLATADTVII+DSDWNP ND+QA SRAHR+GQ+ V IYRFVT KSVEE I AKKKM+
Sbjct: 1010 NLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKML 1069
Query: 637 LDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEES----KKRLLGMDI 692
L+HLV++ G K K EL +LR+G EELF ED + E KK +I
Sbjct: 1070 LNHLVVRA--GLGGKEGKTMSK-TELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEI 1126
Query: 693 --DXXXXXXXXXXXXXXXXXXXXXXX----------SAFKVANFCGAEDDG 731
D S+FKVA++ E +G
Sbjct: 1127 VWDDAAVDALLDRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQTKETEG 1177
Score = 148 (57.2 bits), Expect = 2.6e-150, Sum P(4) = 2.6e-150
Identities = 49/148 (33%), Positives = 72/148 (48%)
Query: 8 EPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKK-VLNYAKKVVEDV--RFRKMVSR 64
EP E EF +KWK S+ C W S L+ F+ +L Y +K D F + V+
Sbjct: 408 EPR-REREFFVKWKYLSYWQCSWVSEMLLE--VHFRMLILLYWRKNDSDAPPEFEESVTS 464
Query: 65 EEIELNDVSKEMD----LDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEAT 120
ND K + I + Q+ RII + S Q+YLVKWK LSY +AT
Sbjct: 465 RHHSDNDPYKLRERFYQYGIKPEWMQIHRII----NHQSYAKSQQDYLVKWKELSYDQAT 520
Query: 121 WEKDE--IIDFAQDAIDEYKAREAAMAE 146
WE+D+ I ++ + I ++ RE+ + E
Sbjct: 521 WERDDSNIANYEEAIIKYWQHRESKLNE 548
Score = 55 (24.4 bits), Expect = 2.6e-150, Sum P(4) = 2.6e-150
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGN 817
T+ + NE R + + ++ + KRR+ E +P P + + QV + N
Sbjct: 1247 TQDDDDDNESYRGSDNGDGLNSDEDDYDEKKKRRRDEEKMP--PLMAKVNGQVEILGF-N 1303
Query: 818 LSKRDATRFYRAVMKFGNQSQIS 840
+R A FY AVM++G Q S
Sbjct: 1304 PRQRKA--FYGAVMRWGMPPQDS 1324
Score = 45 (20.9 bits), Expect = 2.6e-150, Sum P(4) = 2.6e-150
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 939 WNQFDDARLLLGIHYHGFGNWE 960
W + D LL G+ HG+G ++
Sbjct: 1528 WYRRHDYWLLAGVVVHGYGRFQ 1549
Score = 43 (20.2 bits), Expect = 4.8e-149, Sum P(4) = 4.8e-149
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 734 WSR-WIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSE 779
WS I+ E +A+A + A ++R+T E EP+ K+ +E
Sbjct: 1402 WSMPEIQDEVLAKAANGSAQGSSRSTPKPKE--EPKEEPMEKEDATE 1446
Score = 41 (19.5 bits), Expect = 4.6e-139, Sum P(4) = 4.6e-139
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 136 EYKAREAAMAEQGKMVDLQRKKGK 159
+YK + MA QGK V Q + K
Sbjct: 139 KYKEYQDHMAAQGKPVQKQARGSK 162
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 1283 (456.7 bits), Expect = 2.6e-150, Sum P(4) = 2.6e-150
Identities = 269/562 (47%), Positives = 369/562 (65%)
Query: 138 KAREAAMAEQGKMVDLQRKKGKASLRKLDE-QPEWLR--GGKLRDYQLEGLNFLVNSWRN 194
K REA + ++K+ K +RK E QP+++ GGKL YQLEGLN+L + W N
Sbjct: 560 KHREAKGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSN 619
Query: 195 DTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNV 254
T+ ILADEMGLGKTVQS++ L L GPFL+ PLST+ NW +E +W P V
Sbjct: 620 GTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYV 679
Query: 255 IVYVGTRASREVCQQYEFY------------NDKKVGRPIKFNTLLTTYEVVLKDKAVLS 302
+ YVG R +R V +++EF + K +KF+ LLT+YE + DK +LS
Sbjct: 680 VTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTILS 739
Query: 303 KIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDK 362
I+W L+VDEAHRLKN+++ + L+E++ ++L+TGTPLQN++EEL+ LL+FL ++
Sbjct: 740 SIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKER 799
Query: 363 FKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPL 422
F + F + +S E+++ LH L PH+LRR+ DV +P K E I+RVE+S +
Sbjct: 800 FNQLEAFTAEFNEISK--EDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAM 857
Query: 423 QKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDT 482
QK++YK IL RNF LN G Q+SL+N+++ELKKCCNHP+LF A+ N
Sbjct: 858 QKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAE--LEAPKEKNGM 915
Query: 483 SKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
+ +I +SGK V+L K+L +L + HRVLIFSQM RMLDI+ + Y+G++++R+DGS
Sbjct: 916 YEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGS 975
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
++R A+D +NAPG++ F FLLSTRAGGLGINLATADTVII+DSDWNP ND+QA SR
Sbjct: 976 IMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1035
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNEL 662
AHR+GQ+ V IYRFVT KSVEE I AKKKM+L+HLV++ G K K EL
Sbjct: 1036 AHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRA--GLGGKEGKTMSK-TEL 1092
Query: 663 SAILRFGAEELFKEDRNDEESK 684
+LR+G EELF ED + E +
Sbjct: 1093 DDVLRWGTEELFSEDLDAAEGE 1114
Score = 998 (356.4 bits), Expect = 1.7e-117, Sum P(4) = 1.7e-117
Identities = 216/471 (45%), Positives = 297/471 (63%)
Query: 277 KVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNK 336
K +KF+ LLT+YE + DK +LS I+W L+VDEAHRLKN+++ + L+E++ +
Sbjct: 714 KTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYR 773
Query: 337 LLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHIL 396
+L+TGTPLQN++EEL+ LL+FL ++F + F + +S E+++ LH L PH+L
Sbjct: 774 VLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISK--EDQIEKLHNLLGPHML 831
Query: 397 RRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVEL 456
RR+ DV +P K E I+RVE+S +QK++YK IL RNF LN G Q+SL+N+++EL
Sbjct: 832 RRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMEL 891
Query: 457 KKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFS 516
KKCCNHP+LF A+ N + +I +SGK V+L K+L +L + HRVLIFS
Sbjct: 892 KKCCNHPYLFVKAE--LEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFS 949
Query: 517 QMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGI 576
QM RMLDI+ + Y+G++++R+DGS ++R A+D +NAPG++ F FLLSTRAGGLGI
Sbjct: 950 QMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGI 1009
Query: 577 NLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMV 636
NLATADTVII+DSDWNP ND+QA SRAHR+GQ+ V IYRFVT KSVEE I AKKKM+
Sbjct: 1010 NLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKML 1069
Query: 637 LDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEES----KKRLLGMDI 692
L+HLV++ G K K EL +LR+G EELF ED + E KK +I
Sbjct: 1070 LNHLVVRA--GLGGKEGKTMSK-TELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEI 1126
Query: 693 --DXXXXXXXXXXXXXXXXXXXXXXX----------SAFKVANFCGAEDDG 731
D S+FKVA++ E +G
Sbjct: 1127 VWDDAAVDALLDRSNKEETPAGEDGEEKAEWQNEYLSSFKVASYQTKETEG 1177
Score = 148 (57.2 bits), Expect = 2.6e-150, Sum P(4) = 2.6e-150
Identities = 49/148 (33%), Positives = 72/148 (48%)
Query: 8 EPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKK-VLNYAKKVVEDV--RFRKMVSR 64
EP E EF +KWK S+ C W S L+ F+ +L Y +K D F + V+
Sbjct: 408 EPR-REREFFVKWKYLSYWQCSWVSEMLLE--VHFRMLILLYWRKNDSDAPPEFEESVTS 464
Query: 65 EEIELNDVSKEMD----LDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEAT 120
ND K + I + Q+ RII + S Q+YLVKWK LSY +AT
Sbjct: 465 RHHSDNDPYKLRERFYQYGIKPEWMQIHRII----NHQSYAKSQQDYLVKWKELSYDQAT 520
Query: 121 WEKDE--IIDFAQDAIDEYKAREAAMAE 146
WE+D+ I ++ + I ++ RE+ + E
Sbjct: 521 WERDDSNIANYEEAIIKYWQHRESKLNE 548
Score = 55 (24.4 bits), Expect = 2.6e-150, Sum P(4) = 2.6e-150
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGN 817
T+ + NE R + + ++ + KRR+ E +P P + + QV + N
Sbjct: 1247 TQDDDDDNESYRGSDNGDGLNSDEDDYDEKKKRRRDEEKMP--PLMAKVNGQVEILGF-N 1303
Query: 818 LSKRDATRFYRAVMKFGNQSQIS 840
+R A FY AVM++G Q S
Sbjct: 1304 PRQRKA--FYGAVMRWGMPPQDS 1324
Score = 45 (20.9 bits), Expect = 2.6e-150, Sum P(4) = 2.6e-150
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 939 WNQFDDARLLLGIHYHGFGNWE 960
W + D LL G+ HG+G ++
Sbjct: 1528 WYRRHDYWLLAGVVVHGYGRFQ 1549
Score = 43 (20.2 bits), Expect = 4.8e-149, Sum P(4) = 4.8e-149
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 734 WSR-WIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSE 779
WS I+ E +A+A + A ++R+T E EP+ K+ +E
Sbjct: 1402 WSMPEIQDEVLAKAANGSAQGSSRSTPKPKE--EPKEEPMEKEDATE 1446
Score = 41 (19.5 bits), Expect = 4.6e-139, Sum P(4) = 4.6e-139
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 136 EYKAREAAMAEQGKMVDLQRKKGK 159
+YK + MA QGK V Q + K
Sbjct: 139 KYKEYQDHMAAQGKPVQKQARGSK 162
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 1309 (465.8 bits), Expect = 5.5e-150, Sum P(3) = 5.5e-150
Identities = 269/536 (50%), Positives = 367/536 (68%)
Query: 164 KLDEQPEWLR--GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKT+Q++ L L
Sbjct: 772 KYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYK 831
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKV-- 278
GPFLV PLST+ NW +EF+ W P V+ Y G + SR + ++ EF + D +
Sbjct: 832 EGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKG 891
Query: 279 GRP---------IKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
G+ +KF+ LLT+YE++ D+A L I+W L+VDEAHRLKN++++ + L+
Sbjct: 892 GKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLN 951
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ +KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 952 GYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 1009
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 1010 LLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSL 1069
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A + + +I SSGKL++L K+L +L E
Sbjct: 1070 LNIMMDLKKCCNHPYLFPVA--AMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQG 1127
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 1128 HRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLST 1187
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVIIFDSDWNP ND+QA SRAHRIGQ V IYRFVT SVEE I +
Sbjct: 1188 RAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQ 1247
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
AK+KM+L HLV++ + KQ EL IL+FG EELFK D N+ E+K+
Sbjct: 1248 VAKRKMMLTHLVVRPGLGSKAGSMSKQ----ELDDILKFGTEELFK-DENEGENKE 1298
Score = 146 (56.5 bits), Expect = 5.5e-150, Sum P(3) = 5.5e-150
Identities = 55/163 (33%), Positives = 75/163 (46%)
Query: 12 NEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKKV-VEDVRFRKMVSREEIE 68
+E EF +KW G S+ HC W ELQ L F V+ NY +K +++ S E+
Sbjct: 597 SEREFFVKWVGLSYWHCSWAK--ELQ-LEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDG 653
Query: 69 LNDVSK-------EMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
+D K EM+ + + E + RI S D GN YLVKWK L Y +
Sbjct: 654 KSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNY--HYLVKWKDLPYDQ 711
Query: 119 ATWEKDEI-IDFAQDAIDEY-KAREAAMAEQGKMVDLQRKKGK 159
+TWE+DE+ I D Y + RE M E +KK K
Sbjct: 712 STWEEDEMNIPEYDDHKQSYWRHRELIMGEDPAQPRKYKKKKK 754
Score = 70 (29.7 bits), Expect = 5.5e-150, Sum P(3) = 5.5e-150
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHE-TFLPRAPNLKERAN 997
W++ D LL GI HG+ W++I+ D + + + P + + ++ FL R
Sbjct: 1758 WHRRHDYWLLAGIVLHGYARWQDIQNDAQFAIINE--PFKTEANKGNFLEMKNKFLARRF 1815
Query: 998 ALLEMEL 1004
LLE L
Sbjct: 1816 KLLEQAL 1822
Score = 66 (28.3 bits), Expect = 1.5e-141, Sum P(3) = 1.5e-141
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 101 GNVTQEYLVKWKGLSYAEATWEKD 124
G +E+ VKW GLSY +W K+
Sbjct: 595 GRSEREFFVKWVGLSYWHCSWAKE 618
Score = 59 (25.8 bits), Expect = 8.7e-08, Sum P(3) = 8.7e-08
Identities = 28/92 (30%), Positives = 38/92 (41%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ + D +QN LSSF + + I R IIK E P
Sbjct: 1310 AIARLLDRNQDATDDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYW 1369
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1370 EKLLRHHYEQQQED-----LARN---LGKGKR 1393
Score = 44 (20.5 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 358 LDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
++++ +D Q+ ++ S E+E + E R R++ + +K LPP + R+
Sbjct: 1398 VNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARV 1454
Score = 39 (18.8 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 1000 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSPMQKKYYK 1048
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 1309 (465.8 bits), Expect = 7.0e-150, Sum P(3) = 7.0e-150
Identities = 269/536 (50%), Positives = 367/536 (68%)
Query: 164 KLDEQPEWLR--GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKT+Q++ L L
Sbjct: 721 KYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYK 780
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKV-- 278
GPFLV PLST+ NW +EF+ W P V+ Y G + SR + ++ EF + D +
Sbjct: 781 EGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKG 840
Query: 279 GRP---------IKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
G+ +KF+ LLT+YE++ D+A L I+W L+VDEAHRLKN++++ + L+
Sbjct: 841 GKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLN 900
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ +KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 901 GYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 958
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 959 LLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSL 1018
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A + + +I SSGKL++L K+L +L E
Sbjct: 1019 LNIMMDLKKCCNHPYLFPVA--AMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQG 1076
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 1077 HRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLST 1136
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVIIFDSDWNP ND+QA SRAHRIGQ V IYRFVT SVEE I +
Sbjct: 1137 RAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQ 1196
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
AK+KM+L HLV++ + KQ EL IL+FG EELFK D N+ E+K+
Sbjct: 1197 VAKRKMMLTHLVVRPGLGSKAGSMSKQ----ELDDILKFGTEELFK-DENEGENKE 1247
Score = 144 (55.7 bits), Expect = 7.0e-150, Sum P(3) = 7.0e-150
Identities = 52/163 (31%), Positives = 76/163 (46%)
Query: 12 NEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKKV-VEDVRFRKMVSREEIE 68
+E EF +KW G S+ HC W ELQ L F V+ NY +K +++ S E+
Sbjct: 546 SEREFFVKWVGLSYWHCSWAK--ELQ-LEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDG 602
Query: 69 LNDVSK-------EMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
+D K EM+ + + E + RI S D GN YLVKW+ L Y +
Sbjct: 603 KSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNY--HYLVKWRDLPYDQ 660
Query: 119 ATWEKDE--IIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGK 159
+TWE+DE I ++ + ++ RE M E +KK K
Sbjct: 661 STWEEDEMNIPEYEEHKQSYWRHRELIMGEDPAQPRKYKKKKK 703
Score = 70 (29.7 bits), Expect = 7.0e-150, Sum P(3) = 7.0e-150
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHE-TFLPRAPNLKERAN 997
W++ D LL GI HG+ W++I+ D + + + P + + ++ FL R
Sbjct: 1740 WHRRHDYWLLAGIVLHGYARWQDIQNDAQFAIINE--PFKTEANKGNFLEMKNKFLARRF 1797
Query: 998 ALLEMEL 1004
LLE L
Sbjct: 1798 KLLEQAL 1804
Score = 66 (28.3 bits), Expect = 1.2e-141, Sum P(3) = 1.2e-141
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 101 GNVTQEYLVKWKGLSYAEATWEKD 124
G +E+ VKW GLSY +W K+
Sbjct: 544 GRSEREFFVKWVGLSYWHCSWAKE 567
Score = 61 (26.5 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 28/92 (30%), Positives = 39/92 (42%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ ++D +QN LSSF + + I R IIK E P
Sbjct: 1259 AIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYW 1318
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1319 EKLLRHHYEQQQED-----LARN---LGKGKR 1342
Score = 44 (20.5 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 358 LDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
++++ +D Q+ ++ S E+E + E R R++ + +K LPP + R+
Sbjct: 1347 VNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARV 1403
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 949 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSPMQKKYYK 997
Score = 38 (18.4 bits), Expect = 1.6e-146, Sum P(3) = 1.6e-146
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 1063 KPQRVEQPLTKEEGEMSDNEEVYEQFKEV-KWMEWCEDVMADEIRTLQRLQ-RLQATSDN 1120
K + + PL KEE E + EE E+ + + ME D + +RL+ R D
Sbjct: 1563 KGEGIRTPLEKEEAE--NQEEKPEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPLEDE 1620
Query: 1121 LP 1122
+P
Sbjct: 1621 VP 1622
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 766 EPERSNKRKKKGSELQ 781
+P + K KKK ELQ
Sbjct: 691 DPAQPRKYKKKKKELQ 706
Score = 37 (18.1 bits), Expect = 1.3e-138, Sum P(3) = 1.3e-138
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 154 QRKKGKASLRKLDEQPE 170
+RKKG + + + DE PE
Sbjct: 302 KRKKGGSYVFQSDEGPE 318
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 1309 (465.8 bits), Expect = 8.1e-150, Sum P(3) = 8.1e-150
Identities = 269/536 (50%), Positives = 367/536 (68%)
Query: 164 KLDEQPEWLR--GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKT+Q++ L L
Sbjct: 772 KYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYK 831
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKV-- 278
GPFLV PLST+ NW +EF+ W P V+ Y G + SR + ++ EF + D +
Sbjct: 832 EGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKG 891
Query: 279 GRP---------IKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
G+ +KF+ LLT+YE++ D+A L I+W L+VDEAHRLKN++++ + L+
Sbjct: 892 GKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLN 951
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ +KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 952 GYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 1009
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 1010 LLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSL 1069
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A + + +I SSGKL++L K+L +L E
Sbjct: 1070 LNIMMDLKKCCNHPYLFPVA--AMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQG 1127
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 1128 HRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLST 1187
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVIIFDSDWNP ND+QA SRAHRIGQ V IYRFVT SVEE I +
Sbjct: 1188 RAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQ 1247
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
AK+KM+L HLV++ + KQ EL IL+FG EELFK D N+ E+K+
Sbjct: 1248 VAKRKMMLTHLVVRPGLGSKAGSMSKQ----ELDDILKFGTEELFK-DENEGENKE 1298
Score = 146 (56.5 bits), Expect = 8.1e-150, Sum P(3) = 8.1e-150
Identities = 55/163 (33%), Positives = 75/163 (46%)
Query: 12 NEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKKV-VEDVRFRKMVSREEIE 68
+E EF +KW G S+ HC W ELQ L F V+ NY +K +++ S E+
Sbjct: 597 SEREFFVKWVGLSYWHCSWAK--ELQ-LEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDG 653
Query: 69 LNDVSK-------EMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
+D K EM+ + + E + RI S D GN YLVKWK L Y +
Sbjct: 654 KSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNY--HYLVKWKDLPYDQ 711
Query: 119 ATWEKDEI-IDFAQDAIDEY-KAREAAMAEQGKMVDLQRKKGK 159
+TWE+DE+ I D Y + RE M E +KK K
Sbjct: 712 STWEEDEMNIPEYDDHKQSYWRHRELIMGEDPAQPRKYKKKKK 754
Score = 70 (29.7 bits), Expect = 8.1e-150, Sum P(3) = 8.1e-150
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHE-TFLPRAPNLKERAN 997
W++ D LL GI HG+ W++I+ D + + + P + + ++ FL R
Sbjct: 1792 WHRRHDYWLLAGIVLHGYARWQDIQNDAQFAIINE--PFKTEANKGNFLEMKNKFLARRF 1849
Query: 998 ALLEMEL 1004
LLE L
Sbjct: 1850 KLLEQAL 1856
Score = 66 (28.3 bits), Expect = 2.2e-141, Sum P(3) = 2.2e-141
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 101 GNVTQEYLVKWKGLSYAEATWEKD 124
G +E+ VKW GLSY +W K+
Sbjct: 595 GRSEREFFVKWVGLSYWHCSWAKE 618
Score = 59 (25.8 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 28/92 (30%), Positives = 38/92 (41%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ + D +QN LSSF + + I R IIK E P
Sbjct: 1310 AIARLLDRNQDATDDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYW 1369
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1370 EKLLRHHYEQQQED-----LARN---LGKGKR 1393
Score = 44 (20.5 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 358 LDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
++++ +D Q+ ++ S E+E + E R R++ + +K LPP + R+
Sbjct: 1398 VNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARV 1454
Score = 39 (18.8 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 1000 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSPMQKKYYK 1048
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 1309 (465.8 bits), Expect = 1.4e-149, Sum P(3) = 1.4e-149
Identities = 269/536 (50%), Positives = 367/536 (68%)
Query: 164 KLDEQPEWLR--GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKT+Q++ L L
Sbjct: 780 KYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYK 839
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKV-- 278
GPFLV PLST+ NW +EF+ W P V+ Y G + SR + ++ EF + D +
Sbjct: 840 EGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKG 899
Query: 279 GRP---------IKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
G+ +KF+ LLT+YE++ D+A L I+W L+VDEAHRLKN++++ + L+
Sbjct: 900 GKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLN 959
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ +KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 960 GYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 1017
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 1018 LLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSL 1077
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A + + +I SSGKL++L K+L +L E
Sbjct: 1078 LNIMMDLKKCCNHPYLFPVA--AMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQG 1135
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 1136 HRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLST 1195
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVIIFDSDWNP ND+QA SRAHRIGQ V IYRFVT SVEE I +
Sbjct: 1196 RAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQ 1255
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
AK+KM+L HLV++ + KQ EL IL+FG EELFK D N+ E+K+
Sbjct: 1256 VAKRKMMLTHLVVRPGLGSKAGSMSKQ----ELDDILKFGTEELFK-DENEGENKE 1306
Score = 144 (55.7 bits), Expect = 1.4e-149, Sum P(3) = 1.4e-149
Identities = 52/163 (31%), Positives = 76/163 (46%)
Query: 12 NEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKKV-VEDVRFRKMVSREEIE 68
+E EF +KW G S+ HC W ELQ L F V+ NY +K +++ S E+
Sbjct: 605 SEREFFVKWVGLSYWHCSWAK--ELQ-LEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDG 661
Query: 69 LNDVSK-------EMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
+D K EM+ + + E + RI S D GN YLVKW+ L Y +
Sbjct: 662 KSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNY--HYLVKWRDLPYDQ 719
Query: 119 ATWEKDE--IIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGK 159
+TWE+DE I ++ + ++ RE M E +KK K
Sbjct: 720 STWEEDEMNIPEYEEHKQSYWRHRELIMGEDPAQPRKYKKKKK 762
Score = 70 (29.7 bits), Expect = 1.4e-149, Sum P(3) = 1.4e-149
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHE-TFLPRAPNLKERAN 997
W++ D LL GI HG+ W++I+ D + + + P + + ++ FL R
Sbjct: 1799 WHRRHDYWLLAGIVLHGYARWQDIQNDAQFAIINE--PFKTEANKGNFLEMKNKFLARRF 1856
Query: 998 ALLEMEL 1004
LLE L
Sbjct: 1857 KLLEQAL 1863
Score = 66 (28.3 bits), Expect = 2.3e-141, Sum P(3) = 2.3e-141
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 101 GNVTQEYLVKWKGLSYAEATWEKD 124
G +E+ VKW GLSY +W K+
Sbjct: 603 GRSEREFFVKWVGLSYWHCSWAKE 626
Score = 61 (26.5 bits), Expect = 9.3e-08, Sum P(3) = 9.3e-08
Identities = 28/92 (30%), Positives = 39/92 (42%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ ++D +QN LSSF + + I R IIK E P
Sbjct: 1318 AIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYW 1377
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1378 EKLLRHHYEQQQED-----LARN---LGKGKR 1401
Score = 44 (20.5 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 358 LDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
++++ +D Q+ ++ S E+E + E R R++ + +K LPP + R+
Sbjct: 1406 VNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARV 1462
Score = 39 (18.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 1008 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSPMQKKYYK 1056
Score = 38 (18.4 bits), Expect = 3.3e-146, Sum P(3) = 3.3e-146
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 1063 KPQRVEQPLTKEEGEMSDNEEVYEQFKEV-KWMEWCEDVMADEIRTLQRLQ-RLQATSDN 1120
K + + PL KEE E + EE E+ + + ME D + +RL+ R D
Sbjct: 1622 KGEGIRTPLEKEEAE--NQEEKPEKNSRIGEKMETEADAPSPAPSLGERLEPRKIPLEDE 1679
Query: 1121 LP 1122
+P
Sbjct: 1680 VP 1681
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 766 EPERSNKRKKKGSELQ 781
+P + K KKK ELQ
Sbjct: 750 DPAQPRKYKKKKKELQ 765
Score = 37 (18.1 bits), Expect = 2.6e-138, Sum P(3) = 2.6e-138
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 154 QRKKGKASLRKLDEQPE 170
+RKKG + + + DE PE
Sbjct: 361 KRKKGGSYVFQSDEGPE 377
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 1306 (464.8 bits), Expect = 1.5e-149, Sum P(3) = 1.5e-149
Identities = 268/536 (50%), Positives = 367/536 (68%)
Query: 164 KLDEQPEWLR--GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKT+Q++ L L
Sbjct: 719 KYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYK 778
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKV-- 278
GPFLV PLST+ NW +EF+ W P V+ Y G + SR + ++ EF + D +
Sbjct: 779 EGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKG 838
Query: 279 GRP---------IKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
G+ +KF+ LLT+YE++ D+A L I+W L+VDEAHRLKN++++ + L+
Sbjct: 839 GKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLN 898
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ +KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 899 GYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 956
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 957 LLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSL 1016
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A + + +I +SGKL++L K+L +L E
Sbjct: 1017 LNIMMDLKKCCNHPYLFPVA--AMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQG 1074
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 1075 HRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLST 1134
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVIIFDSDWNP ND+QA SRAHRIGQ V IYRFVT SVEE I +
Sbjct: 1135 RAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQ 1194
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
AK+KM+L HLV++ + KQ EL IL+FG EELFK D N+ E+K+
Sbjct: 1195 VAKRKMMLTHLVVRPGLGSKAGSMSKQ----ELDDILKFGTEELFK-DENEGENKE 1245
Score = 144 (55.7 bits), Expect = 1.5e-149, Sum P(3) = 1.5e-149
Identities = 54/163 (33%), Positives = 76/163 (46%)
Query: 12 NEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKKV-VEDVRFRKMVSREEIE 68
+E EF +KW G S+ HC W ELQ L F V+ NY +K +++ S E+
Sbjct: 544 SEREFFVKWVGLSYWHCSWAK--ELQ-LEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDG 600
Query: 69 LNDVSK-------EMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
+D K EM+ + + E + RI S D GN YLVKW+ L Y +
Sbjct: 601 KSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNY--HYLVKWRDLPYDQ 658
Query: 119 ATWEKDEI-IDFAQDAIDEY-KAREAAMAEQGKMVDLQRKKGK 159
+TWE+DE+ I +D Y + RE M E +KK K
Sbjct: 659 STWEEDEMNIPEYEDHKQSYWRHRELIMGEDPAQPRKYKKKKK 701
Score = 70 (29.7 bits), Expect = 1.5e-149, Sum P(3) = 1.5e-149
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHE-TFLPRAPNLKERAN 997
W++ D LL GI HG+ W++I+ D + + + P + + ++ FL R
Sbjct: 1738 WHRRHDYWLLAGIVLHGYARWQDIQNDAQFAIINE--PFKTEANKGNFLEMKNKFLARRF 1795
Query: 998 ALLEMEL 1004
LLE L
Sbjct: 1796 KLLEQAL 1802
Score = 66 (28.3 bits), Expect = 2.4e-141, Sum P(3) = 2.4e-141
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 101 GNVTQEYLVKWKGLSYAEATWEKD 124
G +E+ VKW GLSY +W K+
Sbjct: 542 GRSEREFFVKWVGLSYWHCSWAKE 565
Score = 61 (26.5 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 28/92 (30%), Positives = 39/92 (42%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ ++D +QN LSSF + + I R IIK E P
Sbjct: 1257 AIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYW 1316
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1317 EKLLRHHYEQQQED-----LARN---LGKGKR 1340
Score = 44 (20.5 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 358 LDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
++++ +D Q+ ++ S E+E + E R R++ + +K LPP + R+
Sbjct: 1345 VNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARV 1401
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 947 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSPMQKKYYK 995
Score = 38 (18.4 bits), Expect = 2.2e-138, Sum P(3) = 2.2e-138
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 154 QRKKGKASLRKLDEQPE 170
+RKKG + + + DE PE
Sbjct: 301 KRKKGGSYVLQSDEGPE 317
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 766 EPERSNKRKKKGSELQ 781
+P + K KKK ELQ
Sbjct: 689 DPAQPRKYKKKKKELQ 704
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 1389 (494.0 bits), Expect = 1.5e-149, Sum P(2) = 1.5e-149
Identities = 329/798 (41%), Positives = 477/798 (59%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
++L+KWKG S+LHC W E Q +K N+ K + R+M S N+ S+
Sbjct: 130 QYLVKWKGLSYLHCSWVPEKEFQK--AYKS--NHRLKTRVNNFHRQMES-----FNN-SE 179
Query: 75 EMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAI 134
+ + I + + V+RI+A R + G + EYLVK+K LSY E WE + I Q+ I
Sbjct: 180 DDFVAIRPEWTTVDRILACR---EEDGEL--EYLVKYKELSYDECYWESESDISTFQNEI 234
Query: 135 DEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRN 194
+K + + K VD K+ ++ D PE+L+G L YQLEGLNFL SW
Sbjct: 235 QRFKDVNSR-TRRSKDVD--HKRNPRDFQQFDHTPEFLKG-LLHPYQLEGLNFLRFSWSK 290
Query: 195 DTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNV 254
T+VILADEMGLGKT+QS+++L L IP LV+ PLSTL NW +EF W P MNV
Sbjct: 291 QTHVILADEMGLGKTIQSIALLASLFEENLIP--HLVIAPLSTLRNWEREFATWAPQMNV 348
Query: 255 IVYVGTRASREVCQQYEFY--ND------KKVG--------RPIKFNTLLTTYEVVLKDK 298
++Y GT +R V +++EFY D KK G + IKF+ LLT+YE++ D
Sbjct: 349 VMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDS 408
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
AVL IKW ++VDE HRLKN +++L+++L+++S+ +++L+TGTPLQN+++EL+ L+HFL
Sbjct: 409 AVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFL 468
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
D KF S ++F + +K+++ E +++ LH L PH+LRR+ KDV K +PPK E ILRV+
Sbjct: 469 DAGKFGSLEEFQEEFKDINQ--EEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVD 526
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS 478
+S LQK+YYK I RN+ L K G Q+SL NI++EL+K C HP++ E G +
Sbjct: 527 LSSLQKEYYKAIFTRNYQVLTKK-GGAQISLNNIMMELRKVCCHPYMLE------GVEPV 579
Query: 479 INDTSK-LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQ 537
I+D ++ ++++ S GKL +LDK++V+L E HRVLI++Q MLD+L +Y ++K +Q++
Sbjct: 580 IHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYE 639
Query: 538 RLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 597
R+DG R +D FNA S FCFLLSTRAGGLGINLATADTVII+DSDWNP DL
Sbjct: 640 RIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADL 699
Query: 598 QAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQR 657
QAM+RAHR+GQ V IYR + ++EE +++ KKKMVL+HLV+ KL +
Sbjct: 700 QAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNI------- 752
Query: 658 KGNELSAILRFGAEELFKEDRNDEESKKRLLGMD---IDXXXXXXXXXXXXXXXXXXXXX 714
EL I+R+G++ELF + +DE K + D ID
Sbjct: 753 NQEELDDIIRYGSKELFASE-DDEAGKSGKIHYDDAAIDKLLDRDLVEAEEVSVDDEEEN 811
Query: 715 XX-SAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAA---RNTKSYAEANEPERS 770
AFKVANF +++ + + A +++ + RA+ K E ++ E
Sbjct: 812 GFLKAFKVANFEYIDENEAAALEAQRVAAESKSSAGNSDRASYWEELLKDKFELHQAEEL 871
Query: 771 N---KRKKKGSELQEPQE 785
N KRK+ +L +E
Sbjct: 872 NALGKRKRSRKQLVSIEE 889
Score = 92 (37.4 bits), Expect = 1.5e-149, Sum P(2) = 1.5e-149
Identities = 63/274 (22%), Positives = 110/274 (40%)
Query: 726 GAEDDGSFWSRWIKPE-AVAQAED--ALAPRAARNTKSYAEANEPERSNKR--KKKGSEL 780
G D S+W +K + + QAE+ AL R R+ K E + + G E
Sbjct: 847 GNSDRASYWEELLKDKFELHQAEELNALGKRK-RSRKQLVSIEEDDLAGLEDVSSDGDES 905
Query: 781 QEPQE-------------RVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
E + R RRK ++ P ++G R + N S+R F
Sbjct: 906 YEAESTDGEAAGQGVQTGRRPYRRKGRDNLEPTPLMEGEGRSFRVLGF-NQSQRAI--FV 962
Query: 828 RAVMKFG--NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD-PKGPP 884
+ +M++G N + R + E + E + + E ++ SP G P
Sbjct: 963 QTLMRYGAGNFDWKEFVPR-----LKQKTFEEINEYGILFLKHIAEEIDENSPTFSDGVP 1017
Query: 885 LLDFFGVSVKANDLINRVEELQLLAKRISRYED----PIKQFRVLSYLKPSNWSKGCGWN 940
G+ ++ D++ R+ L L+ +++ ED P+ R+L P S G W
Sbjct: 1018 KE---GLRIE--DVLVRIALLILVQEKVKFVEDHPGKPVFPSRILERF-PGLRS-GKIWK 1070
Query: 941 QFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
+ D ++ + HG+G W+ I D+ LG+ + I
Sbjct: 1071 EEHDKIMIRAVLKHGYGRWQAIVDDKELGIQELI 1104
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 1306 (464.8 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 268/536 (50%), Positives = 367/536 (68%)
Query: 164 KLDEQPEWLR--GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K + QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKT+Q++ L L
Sbjct: 721 KYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYK 780
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKV-- 278
GPFLV PLST+ NW +EF+ W P V+ Y G + SR + ++ EF + D +
Sbjct: 781 EGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKG 840
Query: 279 GRP---------IKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
G+ +KF+ LLT+YE++ D+A L I+W L+VDEAHRLKN++++ + L+
Sbjct: 841 GKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLN 900
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ +KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 901 GYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 958
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 959 LLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSL 1018
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A + + +I +SGKL++L K+L +L E
Sbjct: 1019 LNIMMDLKKCCNHPYLFPVA--AMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQG 1076
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 1077 HRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLST 1136
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVIIFDSDWNP ND+QA SRAHRIGQ V IYRFVT SVEE I +
Sbjct: 1137 RAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQ 1196
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
AK+KM+L HLV++ + KQ EL IL+FG EELFK D N+ E+K+
Sbjct: 1197 VAKRKMMLTHLVVRPGLGSKAGSMSKQ----ELDDILKFGTEELFK-DENEGENKE 1247
Score = 144 (55.7 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 54/163 (33%), Positives = 76/163 (46%)
Query: 12 NEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKKV-VEDVRFRKMVSREEIE 68
+E EF +KW G S+ HC W ELQ L F V+ NY +K +++ S E+
Sbjct: 546 SEREFFVKWVGLSYWHCSWAK--ELQ-LEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDG 602
Query: 69 LNDVSK-------EMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
+D K EM+ + + E + RI S D GN YLVKW+ L Y +
Sbjct: 603 KSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNY--HYLVKWRDLPYDQ 660
Query: 119 ATWEKDEI-IDFAQDAIDEY-KAREAAMAEQGKMVDLQRKKGK 159
+TWE+DE+ I +D Y + RE M E +KK K
Sbjct: 661 STWEEDEMNIPEYEDHKQSYWRHRELIMGEDPAQPRKYKKKKK 703
Score = 70 (29.7 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHE-TFLPRAPNLKERAN 997
W++ D LL GI HG+ W++I+ D + + + P + + ++ FL R
Sbjct: 1742 WHRRHDYWLLAGIVLHGYARWQDIQNDAQFAIINE--PFKTEANKGNFLEMKNKFLARRF 1799
Query: 998 ALLEMEL 1004
LLE L
Sbjct: 1800 KLLEQAL 1806
Score = 66 (28.3 bits), Expect = 2.6e-141, Sum P(3) = 2.6e-141
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 101 GNVTQEYLVKWKGLSYAEATWEKD 124
G +E+ VKW GLSY +W K+
Sbjct: 544 GRSEREFFVKWVGLSYWHCSWAKE 567
Score = 61 (26.5 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 28/92 (30%), Positives = 39/92 (42%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKI 411
A+ LD ++ ++D +QN LSSF + + I R IIK E P
Sbjct: 1259 AIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYW 1318
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDLNKGVR 443
E++LR Q+ L RN L KG R
Sbjct: 1319 EKLLRHHYEQQQED-----LARN---LGKGKR 1342
Score = 44 (20.5 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 358 LDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
++++ +D Q+ ++ S E+E + E R R++ + +K LPP + R+
Sbjct: 1347 VNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARV 1403
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 949 KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRV--ELSPMQKKYYK 997
Score = 38 (18.4 bits), Expect = 2.3e-138, Sum P(3) = 2.3e-138
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 154 QRKKGKASLRKLDEQPE 170
+RKKG + + + DE PE
Sbjct: 302 KRKKGGSYVLQSDEGPE 318
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 766 EPERSNKRKKKGSELQ 781
+P + K KKK ELQ
Sbjct: 691 DPAQPRKYKKKKKELQ 706
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 1267 (451.1 bits), Expect = 4.0e-148, Sum P(4) = 4.0e-148
Identities = 270/569 (47%), Positives = 371/569 (65%)
Query: 124 DEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKAS-LRKLDEQPEWLR--GGKLRDY 180
DE+ Q I + + + ++ ++ ++K+ K L+K + QP+++ GG L Y
Sbjct: 560 DEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKREKIDILKKYEVQPDFISETGGNLHPY 619
Query: 181 QLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSN 240
QLEG+N+L + W N T+ ILADEMGLGKTVQS++ L L GPFL+ PLST+ N
Sbjct: 620 QLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIIN 679
Query: 241 WAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKV-GRP----------IKFNTLL 288
W +E W P V+ YVG R SR V +++EF + D V G P +KF+ LL
Sbjct: 680 WEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLL 739
Query: 289 TTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
T+YE + DKA+LS I W L+VDEAHRLKN+++ + L E++ + ++L+TGTPLQN++
Sbjct: 740 TSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNL 799
Query: 349 EELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLP 408
EEL+ LL+FL D+F + F + +S E+++ LH L PH+LRR+ DV +P
Sbjct: 800 EELFHLLNFLAPDRFNQLESFTAEFSEISK--EDQIEKLHNLLGPHMLRRLKADVLTGMP 857
Query: 409 PKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFES 468
K E I+RVE+S +QK+YYK IL RNF LN G Q+SL+NI++ELKKCCNHP+LF
Sbjct: 858 SKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMK 917
Query: 469 ADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEY 528
A N + +I ++GK V+L K+L +L + HRVLIFSQM MLDIL ++
Sbjct: 918 AC--LEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDF 975
Query: 529 MSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFD 588
+G++++R+DGS + R A+D +NAPG++ F FLLSTRAGGLGINLATADTVII+D
Sbjct: 976 CDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYD 1035
Query: 589 SDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAE 648
SDWNP ND+QA SRAHR+GQ+ V IYRFVT SVEE I AKKKM+L HLV++
Sbjct: 1036 SDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRA--GL 1093
Query: 649 GSWRRKKQRKGNELSAILRFGAEELFKED 677
G+ K K EL +LR+G EELFKE+
Sbjct: 1094 GAKDGKSMSK-TELDDVLRWGTEELFKEE 1121
Score = 136 (52.9 bits), Expect = 4.0e-148, Sum P(4) = 4.0e-148
Identities = 55/166 (33%), Positives = 82/166 (49%)
Query: 8 EPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVED---VRFRKMVSR 64
EP E EF +KWK ++ C+W S L ++ V Y +KV + + +SR
Sbjct: 420 EPR-REREFFVKWKYLAYWQCEWLS-ETLMDVYFTALVRMYWRKVDSENPPIFEESTLSR 477
Query: 65 EEIELNDVS-KEMDLDI-IKQN-SQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATW 121
+ + +E +K Q+ RII + +S S Q+YLVKWK LSY ATW
Sbjct: 478 HHSDHDPYKLRERFYQYGVKPEWMQIHRII-NHLSYAKS---QQDYLVKWKELSYEHATW 533
Query: 122 EKDEIIDFA--QDAIDEY-KAREAAMAEQ-----GKMVDLQRK-KG 158
E+D+ D A +DAI +Y RE + ++ KM+ QR+ KG
Sbjct: 534 ERDDT-DIANYEDAIIKYWHHRERMLNDEVPRNVQKMIAKQREAKG 578
Score = 61 (26.5 bits), Expect = 4.0e-148, Sum P(4) = 4.0e-148
Identities = 32/130 (24%), Positives = 57/130 (43%)
Query: 728 EDDGSFWSRWIKPEAVAQAEDALAP----RAARNTKSYAEANEPE----RSNKRKKK--G 777
E D ++W + +K E L + R +YA N + ++N+++++ G
Sbjct: 1208 EQDPNYWEKLLKHHYEQDQETELQKLGKGKRVRRQVNYASENMGQDWSAQNNQQQEEDDG 1267
Query: 778 SE--------LQEPQE-RVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYR 828
SE LQ ++ +RR+ E S P + + Q+ + N +R A FY
Sbjct: 1268 SEYGSDNGELLQTDEDYEERRRRREERSEKLPPLLAKVNGQIEVLGF-NPRQRKA--FYN 1324
Query: 829 AVMKFGNQSQ 838
AVM++G Q
Sbjct: 1325 AVMRWGMPPQ 1334
Score = 49 (22.3 bits), Expect = 7.4e-147, Sum P(4) = 7.4e-147
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 754 AARNTKSYAEANEPERSNKRKKKGSELQEP 783
A NTK +A++ E + K+G+E Q+P
Sbjct: 1182 ATYNTKEADDADDDEDETEVIKEGTEEQDP 1211
Score = 42 (19.8 bits), Expect = 4.0e-148, Sum P(4) = 4.0e-148
Identities = 17/90 (18%), Positives = 34/90 (37%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL + +G+G ++ I + + K + V +T A N + N
Sbjct: 1515 WHRRHDFWLLAAVAVYGYGRYQ-INFQDIMN-DPKFSIVNEPFKQTGADPATNFADVKNK 1572
Query: 999 LLEMELXXXXXXXXXXXXXRKASKKGREKS 1028
L R+A+ +++S
Sbjct: 1573 FLARRFKLLEQSLVIEEQLRRAAHINKQQS 1602
Score = 41 (19.5 bits), Expect = 9.4e-147, Sum P(4) = 9.4e-147
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 1173 DQIVLEHEEELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLKQERQEEAGIGPSHING 1232
++++ H E+ + + + V N + E + Q +S ++QEE G + G
Sbjct: 1215 EKLLKHHYEQDQETELQKLGKGKRVRRQVNYASENMGQDWSAQNNQQQEEDD-GSEY--G 1271
Query: 1233 SASGSI-DNDLNFSTFNRHAERQ 1254
S +G + D ++ R E +
Sbjct: 1272 SDNGELLQTDEDYEERRRRREER 1294
Score = 40 (19.1 bits), Expect = 8.3e-146, Sum P(4) = 8.3e-146
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 1041 RDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKE 1090
++++G+ G K ++ + + +V TKE + D+E+ E KE
Sbjct: 1158 KEEEGQDGEKKEHWT---NEYLSSFKVATYNTKEADDADDDEDETEVIKE 1204
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 1267 (451.1 bits), Expect = 4.0e-148, Sum P(4) = 4.0e-148
Identities = 270/569 (47%), Positives = 371/569 (65%)
Query: 124 DEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKAS-LRKLDEQPEWLR--GGKLRDY 180
DE+ Q I + + + ++ ++ ++K+ K L+K + QP+++ GG L Y
Sbjct: 560 DEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKREKIDILKKYEVQPDFISETGGNLHPY 619
Query: 181 QLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSN 240
QLEG+N+L + W N T+ ILADEMGLGKTVQS++ L L GPFL+ PLST+ N
Sbjct: 620 QLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIIN 679
Query: 241 WAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKV-GRP----------IKFNTLL 288
W +E W P V+ YVG R SR V +++EF + D V G P +KF+ LL
Sbjct: 680 WEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLL 739
Query: 289 TTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
T+YE + DKA+LS I W L+VDEAHRLKN+++ + L E++ + ++L+TGTPLQN++
Sbjct: 740 TSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNL 799
Query: 349 EELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLP 408
EEL+ LL+FL D+F + F + +S E+++ LH L PH+LRR+ DV +P
Sbjct: 800 EELFHLLNFLAPDRFNQLESFTAEFSEISK--EDQIEKLHNLLGPHMLRRLKADVLTGMP 857
Query: 409 PKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFES 468
K E I+RVE+S +QK+YYK IL RNF LN G Q+SL+NI++ELKKCCNHP+LF
Sbjct: 858 SKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMK 917
Query: 469 ADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEY 528
A N + +I ++GK V+L K+L +L + HRVLIFSQM MLDIL ++
Sbjct: 918 AC--LEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDF 975
Query: 529 MSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFD 588
+G++++R+DGS + R A+D +NAPG++ F FLLSTRAGGLGINLATADTVII+D
Sbjct: 976 CDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYD 1035
Query: 589 SDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAE 648
SDWNP ND+QA SRAHR+GQ+ V IYRFVT SVEE I AKKKM+L HLV++
Sbjct: 1036 SDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRA--GL 1093
Query: 649 GSWRRKKQRKGNELSAILRFGAEELFKED 677
G+ K K EL +LR+G EELFKE+
Sbjct: 1094 GAKDGKSMSK-TELDDVLRWGTEELFKEE 1121
Score = 136 (52.9 bits), Expect = 4.0e-148, Sum P(4) = 4.0e-148
Identities = 55/166 (33%), Positives = 82/166 (49%)
Query: 8 EPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVED---VRFRKMVSR 64
EP E EF +KWK ++ C+W S L ++ V Y +KV + + +SR
Sbjct: 420 EPR-REREFFVKWKYLAYWQCEWLS-ETLMDVYFTALVRMYWRKVDSENPPIFEESTLSR 477
Query: 65 EEIELNDVS-KEMDLDI-IKQN-SQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATW 121
+ + +E +K Q+ RII + +S S Q+YLVKWK LSY ATW
Sbjct: 478 HHSDHDPYKLRERFYQYGVKPEWMQIHRII-NHLSYAKS---QQDYLVKWKELSYEHATW 533
Query: 122 EKDEIIDFA--QDAIDEY-KAREAAMAEQ-----GKMVDLQRK-KG 158
E+D+ D A +DAI +Y RE + ++ KM+ QR+ KG
Sbjct: 534 ERDDT-DIANYEDAIIKYWHHRERMLNDEVPRNVQKMIAKQREAKG 578
Score = 61 (26.5 bits), Expect = 4.0e-148, Sum P(4) = 4.0e-148
Identities = 32/130 (24%), Positives = 57/130 (43%)
Query: 728 EDDGSFWSRWIKPEAVAQAEDALAP----RAARNTKSYAEANEPE----RSNKRKKK--G 777
E D ++W + +K E L + R +YA N + ++N+++++ G
Sbjct: 1208 EQDPNYWEKLLKHHYEQDQETELQKLGKGKRVRRQVNYASENMGQDWSAQNNQQQEEDDG 1267
Query: 778 SE--------LQEPQE-RVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYR 828
SE LQ ++ +RR+ E S P + + Q+ + N +R A FY
Sbjct: 1268 SEYGSDNGELLQTDEDYEERRRRREERSEKLPPLLAKVNGQIEVLGF-NPRQRKA--FYN 1324
Query: 829 AVMKFGNQSQ 838
AVM++G Q
Sbjct: 1325 AVMRWGMPPQ 1334
Score = 49 (22.3 bits), Expect = 7.4e-147, Sum P(4) = 7.4e-147
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 754 AARNTKSYAEANEPERSNKRKKKGSELQEP 783
A NTK +A++ E + K+G+E Q+P
Sbjct: 1182 ATYNTKEADDADDDEDETEVIKEGTEEQDP 1211
Score = 42 (19.8 bits), Expect = 4.0e-148, Sum P(4) = 4.0e-148
Identities = 17/90 (18%), Positives = 34/90 (37%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL + +G+G ++ I + + K + V +T A N + N
Sbjct: 1515 WHRRHDFWLLAAVAVYGYGRYQ-INFQDIMN-DPKFSIVNEPFKQTGADPATNFADVKNK 1572
Query: 999 LLEMELXXXXXXXXXXXXXRKASKKGREKS 1028
L R+A+ +++S
Sbjct: 1573 FLARRFKLLEQSLVIEEQLRRAAHINKQQS 1602
Score = 41 (19.5 bits), Expect = 9.4e-147, Sum P(4) = 9.4e-147
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 1173 DQIVLEHEEELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLKQERQEEAGIGPSHING 1232
++++ H E+ + + + V N + E + Q +S ++QEE G + G
Sbjct: 1215 EKLLKHHYEQDQETELQKLGKGKRVRRQVNYASENMGQDWSAQNNQQQEEDD-GSEY--G 1271
Query: 1233 SASGSI-DNDLNFSTFNRHAERQ 1254
S +G + D ++ R E +
Sbjct: 1272 SDNGELLQTDEDYEERRRRREER 1294
Score = 40 (19.1 bits), Expect = 8.3e-146, Sum P(4) = 8.3e-146
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 1041 RDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKE 1090
++++G+ G K ++ + + +V TKE + D+E+ E KE
Sbjct: 1158 KEEEGQDGEKKEHWT---NEYLSSFKVATYNTKEADDADDDEDETEVIKE 1204
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 1381 (491.2 bits), Expect = 3.1e-144, Sum P(4) = 3.1e-144
Identities = 312/814 (38%), Positives = 474/814 (58%)
Query: 8 EPDWNEME-FLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREE 66
EP + ++E + +K++ S+LHC+W++ EL L G ++V A K+ R+ ++
Sbjct: 1873 EPVFIDVEEYFVKYRNFSYLHCEWRTEEEL--LKGDRRV---AAKI------RRFQQKQS 1921
Query: 67 IELNDVSKEMDLDIIKQNSQVERIIADRISKD-SSGNVTQEYLVKWKGLSYAEATWEKDE 125
+LN D + ++V+R++ + D +SG T+ YLVKWK L Y + TWE +E
Sbjct: 1922 QQLNIFENIEDEPFNQDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEE 1981
Query: 126 IIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGL 185
+D D I++Y R + ++ + +R + +KL++ P + G LR YQLEGL
Sbjct: 1982 DVD--NDKIEQY-LRFNKIPQRSEWKSKKRPHPEL-WKKLEKTPVYKGGNSLRPYQLEGL 2037
Query: 186 NFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEF 245
N+L SW N N ILADEMGLGKT+QS++ + + I GPFLV+ PLST+ NW +EF
Sbjct: 2038 NWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYE-YGIRGPFLVIAPLSTIPNWQREF 2096
Query: 246 RKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGR----PIKFNTLLTTYEVVLKDKAVL 301
W MNV+VY G+ S+++ Q YE+Y + G+ PIKFN L+TT+E+++ D L
Sbjct: 2097 EGWTD-MNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTDYMDL 2155
Query: 302 SKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHD 361
W ++DEAHRLKN +L L + + ++++L++GTPLQN++ EL++LL+FL+
Sbjct: 2156 KAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPS 2215
Query: 362 KFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSP 421
+F S+++F+ + +L + E E+ L L+P +LRR+ DVEKSL PK E I+ VE++
Sbjct: 2216 QFSSQEEFMSEFGSLRT--EEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTN 2273
Query: 422 LQKQYYKWILERNFHDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESAD----HGYGGD 476
+QK+YY+ ILE+NF L KG + +L+N ++EL+KCC HP+L A+ + +
Sbjct: 2274 IQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQ 2333
Query: 477 TSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQF 536
+ S + +ILS+GK+V++DKLL +L HRVLIFSQMVR LDIL +Y+ Y+ + F
Sbjct: 2334 HGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPF 2393
Query: 537 QRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQND 596
+R+DG + LR +A+D ++ PGS+ F FLL T+AGGLGINL ADTVII+DSDWNPQND
Sbjct: 2394 ERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQND 2453
Query: 597 LQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWR-RKK 655
LQA +R HRIGQ+++V IYR + + E ++ ++A K+ LD V+Q +N +GS K
Sbjct: 2454 LQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNK 2513
Query: 656 QRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXX 715
Q E+ +L+ GA +D N + + DID
Sbjct: 2514 QLSKKEIEDLLKKGAYGAVMDDDNAGD---KFCEEDIDSILKRRTQVITMESEKGSTFSK 2570
Query: 716 XSAFKVANFCGAE-DDGSFWSRWIK-----PEAVA--QAEDALA--PRAARNTKSYA--- 762
S N DD FW++W K P+A + ED + PR K Y
Sbjct: 2571 ASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRRTQIKRYGHED 2630
Query: 763 --EANEPERSNKRK-KKGSELQEPQERVHKRRKA 793
E N E SN+ ++G + R KR +A
Sbjct: 2631 VMELNSEESSNENSDEEGGIGLRSRRRKEKRDRA 2664
Score = 56 (24.8 bits), Expect = 3.1e-144, Sum P(4) = 3.1e-144
Identities = 28/112 (25%), Positives = 47/112 (41%)
Query: 738 IKPEAVA--QAEDALA--PRAARNTKSYA-----EANEPERSNKRK-KKGSELQEPQERV 787
I P+A + ED + PR K Y E N E SN+ ++G + R
Sbjct: 2599 IDPDACERDETEDLVLSEPRRRTQIKRYGHEDVMELNSEESSNENSDEEGGIGLRSRRRK 2658
Query: 788 HKRRKAEFSVPSVPFI----DGASAQ-VRDWSYGNLSKRDATRFYRAVMKFG 834
KR +A + +I D +A + + YGN +K + + + ++ FG
Sbjct: 2659 EKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFG 2710
Score = 55 (24.4 bits), Expect = 7.5e-142, Sum P(3) = 7.5e-142
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 745 QAEDALAPRAA--RNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVP 798
+ ED + + + SY +A E + ++ +K S EP E+ + E +VP
Sbjct: 3835 ECEDKVVEKVEEEKGENSYEKAEEQKEETEKLEKSSIESEPSEKSETVLEPEVAVP 3890
Score = 52 (23.4 bits), Expect = 3.1e-144, Sum P(4) = 3.1e-144
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 930 PSNWSKGCGWNQFD-DARLLLGIHYHGFGNWENIRLDERL 968
PS+W WN D LL+G + HG + +R D L
Sbjct: 2922 PSSW-----WNPICCDKSLLVGTYKHGCEMYRQMRADPNL 2956
Score = 45 (20.9 bits), Expect = 3.1e-144, Sum P(4) = 3.1e-144
Identities = 36/135 (26%), Positives = 49/135 (36%)
Query: 1198 STFSNLSG--EKLHQIYSKLKQERQEEAGIGP--SHINGSAS--GSIDNDLNFSTFNRHA 1251
S+ SN S K HQ SK Q R A S +N AS G ST +
Sbjct: 4917 SSASNTSSTQSKSHQSQSKSSQSRNTTASANSAASLMNAMASMGGGASTVTTPSTSASGS 4976
Query: 1252 ER--QKGHKNVSTY--------QMTEPIHKGIDPKKFEAWKRRRRAETDMYSQAQPMLQR 1301
R Q +N S Q++ + G DP E+ R + ++ L
Sbjct: 4977 GRGRQSSSRNQSQTTPTAADMAQLSSLLMPGADPHLLESLSRMSNMDLAQATRLMSSLGM 5036
Query: 1302 PMNNGTRLPDPNSLG 1316
P +GT P+S G
Sbjct: 5037 PPLSGT----PSSSG 5047
Score = 44 (20.5 bits), Expect = 1.5e-139, Sum P(2) = 1.5e-139
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 744 AQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQER 786
+ A A A A N +S P N++ E Q P++R
Sbjct: 5442 SSAAAAAAAAAEENRRSSNRLKRPRSGNEQGSGSVEGQPPEKR 5484
Score = 43 (20.2 bits), Expect = 5.1e-144, Sum P(4) = 5.1e-144
Identities = 16/74 (21%), Positives = 31/74 (41%)
Query: 1206 EKLHQIYSKLKQERQEEAGIGPSHINGSASGSIDNDLNFSTFNRHAERQKGHKNVSTYQM 1265
+K Q + +Q++Q+ + GP ++ G + +N T R + +
Sbjct: 4544 QKQQQQQQQQQQQQQQHSMPGPQNLTGEEPVPV---INKQTGKRLGGNKAPQLKRLMQWL 4600
Query: 1266 TEPIHKGIDPKKFE 1279
TE + +DPK E
Sbjct: 4601 TENPNYEVDPKWLE 4614
Score = 43 (20.2 bits), Expect = 1.4e-140, Sum P(3) = 1.4e-140
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 743 VAQAE-DALAPRAARNTKSYAEANEPERSNK-----RKKKG-SELQEPQERVHKRRKAE- 794
V++ E D AP N +E+ E E +K ++KG + ++ +E+ + K E
Sbjct: 3809 VSEMEADEAAPNTEENCSGDSESPEKECEDKVVEKVEEEKGENSYEKAEEQKEETEKLEK 3868
Query: 795 FSVPSVP 801
S+ S P
Sbjct: 3869 SSIESEP 3875
Score = 38 (18.4 bits), Expect = 6.4e-139, Sum P(2) = 6.4e-139
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 1241 DLNFSTFNRHAE-RQKGHKNVSTYQMTEPIHKGIDPKKFEAWKRRRRAE 1288
DL S R + ++ GH++V E ++ D + + RRR E
Sbjct: 2611 DLVLSEPRRRTQIKRYGHEDVMELNSEESSNENSDEEGGIGLRSRRRKE 2659
Score = 37 (18.1 bits), Expect = 5.9e-140, Sum P(3) = 5.9e-140
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 944 DARLLLGIHYHGFGNW 959
DA LG+ +GNW
Sbjct: 2679 DALAALGLEEIQYGNW 2694
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 1348 (479.6 bits), Expect = 4.1e-144, Sum P(4) = 4.1e-144
Identities = 308/797 (38%), Positives = 469/797 (58%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W + ++L+ K++ K RF+ +++ ++ +
Sbjct: 667 EFFVKYKNYSYLHCEWATISQLEK---DKRIHQKLK------RFKTKMAQMRHFFHEDEE 717
Query: 75 EMDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
+ D + +V+RI+ + S D +G YLVKW L Y ++TWE E +D +
Sbjct: 718 PFNPDYV----EVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGK 771
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I E+K ++ E K V+ R + A +KL+ E+ +LR+YQLEG+N+L+ +W
Sbjct: 772 IREFKRIQSRHPEL-KRVN--RPQANA-WKKLELSHEYKNRNQLREYQLEGVNWLLFNWY 827
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + N I GPFLV+ PLST++NW +EF W MN
Sbjct: 828 NRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWTE-MN 885
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPI----KFNTLLTTYEVVLKDKAVLSKIKWNYL 309
IVY G+ ASR++ QQYE Y GR I KF+ L+TT+E++L D L +I+W +
Sbjct: 886 TIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCV 945
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L +L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ +F
Sbjct: 946 IIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEF 1005
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
++++ +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 1006 LKDFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRA 1063
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS-----INDTS 483
ILE+NF L+KG N +LLN ++EL+KCCNHP+L A+ + I
Sbjct: 1064 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDF 1123
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
L+ ++ S+GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1124 HLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 1183
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 603
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1184 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1243
Query: 604 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNEL 662
HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q ++ +G+ +Q E+
Sbjct: 1244 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEI 1303
Query: 663 SAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA 722
+LR GA E+ +DE SK DID ++F +
Sbjct: 1304 EDLLRKGAYAAIMEE-DDEGSK--FCEEDIDQILLRRTTTITIESEGKGSTFAKASFVAS 1360
Query: 723 -NFCGAE-DDGSFWSRWIKPEAV----AQAEDALA---PRAARNTKSYAEANEPERSNKR 773
N DD +FW +W K + +++ L PR + T+ ++ + +
Sbjct: 1361 ENRTDISLDDPNFWQKWAKKADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFS 1420
Query: 774 KKKGSELQEPQERVHKR 790
+ + + P+ R H R
Sbjct: 1421 DLESEDDERPRSRRHDR 1437
Score = 74 (31.1 bits), Expect = 4.1e-144, Sum P(4) = 4.1e-144
Identities = 48/208 (23%), Positives = 82/208 (39%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E E +R +R +A F + + Q R W+ +R+ T FY
Sbjct: 1757 QRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIA---RREKQQR-WT-----RREQTDFY 1807
Query: 828 RAVMKFG-----NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPDPKG 882
R V FG + Q + E + + F + CR+ +
Sbjct: 1808 RVVSTFGVEYDPDNMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLPPAAGDE 1867
Query: 883 PPLLDFFGVSV---KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGW 939
PP + F + +A+ + R+E L+ L +++ + P+ + R L+ +P W
Sbjct: 1868 PPDPNLFIEPITEERASRTLYRIELLRRLREQVLCH--PLLEDR-LALCQPPGLELPKWW 1924
Query: 940 NQF-DDARLLLGIHYHGFGNWE-NIRLD 965
D LL G HG + NI D
Sbjct: 1925 EPVRHDGELLRGAARHGVSQTDCNIMQD 1952
Score = 65 (27.9 bits), Expect = 3.7e-143, Sum P(4) = 3.7e-143
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 922 FRVLSYLK-PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKK 973
F V+ L+ P+ W W+ D LL+G+ HG+ + +R D L +K
Sbjct: 1612 FPVVDQLEVPTTW-----WDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEK 1659
Score = 43 (20.2 bits), Expect = 4.1e-144, Sum P(4) = 4.1e-144
Identities = 17/87 (19%), Positives = 42/87 (48%)
Query: 1172 IDQIVLEHEEELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLKQERQEEAGIGPSHIN 1231
+D + L+ E+E+ + R+T + + S+ + KL+ + ++ + S ++
Sbjct: 2019 LDSLTLKLEDEVVARSRLTPQDYEIRVASSDTAPLSRSVPPVKLEDDDDSDSELDLSKLS 2078
Query: 1232 GSASGSIDNDLNFSTFNRHAERQKGHK 1258
S+S S + + S+ + +E +K K
Sbjct: 2079 PSSSSSSSSSSSSSSSDE-SEDEKEEK 2104
Score = 42 (19.8 bits), Expect = 4.1e-144, Sum P(4) = 4.1e-144
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1268 PIHKGIDPKKFEAWKRRRRAETDMYSQAQP 1297
P+ +D + RRAE DM+ Q P
Sbjct: 2316 PVINKVDGTLLVGDEAPRRAELDMWLQGHP 2345
Score = 39 (18.8 bits), Expect = 6.6e-137, Sum P(2) = 6.6e-137
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 771 NKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASA 808
N + S LQ H + S+P +PF+ G +A
Sbjct: 2445 NTFQHSSSNLQSVSSLGHSSATSA-SLPFMPFVMGGAA 2481
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 1347 (479.2 bits), Expect = 1.6e-143, Sum P(3) = 1.6e-143
Identities = 308/797 (38%), Positives = 469/797 (58%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W + ++L+ K++ K RF+ +++ ++ +
Sbjct: 284 EFFVKYKNYSYLHCEWATISQLEK---DKRIHQKLK------RFKTKMAQMRHFFHEDEE 334
Query: 75 EMDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
+ D + +V+RI+ + S D +G YLVKW L Y ++TWE E +D +
Sbjct: 335 PFNPDYV----EVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGK 388
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I E+K ++ E K V+ R + A +KL+ E+ +LR+YQLEG+N+L+ +W
Sbjct: 389 IREFKRIQSRHPEL-KRVN--RPQASA-WKKLELSHEYKNRNQLREYQLEGVNWLLFNWY 444
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + N I GPFLV+ PLST++NW +EF W MN
Sbjct: 445 NRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWTE-MN 502
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPI----KFNTLLTTYEVVLKDKAVLSKIKWNYL 309
IVY G+ ASR++ QQYE Y GR I KF+ L+TT+E++L D L +I+W +
Sbjct: 503 TIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCV 562
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L +L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ +F
Sbjct: 563 IIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEF 622
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
++++ +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 623 LKDFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRA 680
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS-----INDTS 483
ILE+NF L+KG N +LLN ++EL+KCCNHP+L A+ + I
Sbjct: 681 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDF 740
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
L+ ++ S+GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 741 HLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 800
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 603
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 801 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 860
Query: 604 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNEL 662
HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q ++ +G+ +Q E+
Sbjct: 861 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEI 920
Query: 663 SAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA 722
+LR GA E+ +DE SK DID ++F +
Sbjct: 921 EDLLRKGAYAAIMEE-DDEGSK--FCEEDIDQILLRRTTTITIESEGKGSTFAKASFVAS 977
Query: 723 -NFCGAE-DDGSFWSRWIKPEAV----AQAEDALA---PRAARNTKSYAEANEPERSNKR 773
N DD +FW +W K + +++ L PR + T+ ++ + +
Sbjct: 978 ENRTDISLDDPNFWQKWAKKADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFS 1037
Query: 774 KKKGSELQEPQERVHKR 790
+ + + P+ R H R
Sbjct: 1038 DLESEDDERPRSRRHDR 1054
Score = 85 (35.0 bits), Expect = 1.6e-143, Sum P(3) = 1.6e-143
Identities = 58/247 (23%), Positives = 101/247 (40%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E E +R +R +A F + + Q R W+ +R+ T FY
Sbjct: 1374 QRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIA---RREKQQR-WT-----RREQTDFY 1424
Query: 828 RAVMKFGNQSQISLIAR--DAGGAVATAPQ---EVVVELFDILIDGCREAVEVGSPDPKG 882
R V FG + + D A + E + + F + CR+ +
Sbjct: 1425 RVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLPPAAGDE 1484
Query: 883 PPLLDFFGVSV---KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGW 939
PP + F + +A+ + R+E L+ L +++ + P+ + R L+ +P W
Sbjct: 1485 PPDPNLFIEPITEERASRTLYRIELLRRLREQVLCH--PLLEDR-LALCQPPGPELPKWW 1541
Query: 940 NQF-DDARLLLGIHYHGFGNWE-NIRLDERLG-LTKKIAPVELQHHETFLPRAPNLKERA 996
D LL G HG + NI D L ++ +Q+H+ P AP+L +
Sbjct: 1542 EPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMN--YMQNHQAGAP-APSLSRCS 1598
Query: 997 NALLEME 1003
LL +
Sbjct: 1599 TPLLHQQ 1605
Score = 65 (27.9 bits), Expect = 2.0e-141, Sum P(3) = 2.0e-141
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 922 FRVLSYLK-PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKK 973
F V+ L+ P+ W W+ D LL+G+ HG+ + +R D L +K
Sbjct: 1229 FPVVDQLEVPTTW-----WDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEK 1276
Score = 40 (19.1 bits), Expect = 1.6e-137, Sum P(2) = 1.6e-137
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 771 NKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASA 808
N + S LQ H + S+P VPF+ G +A
Sbjct: 2063 NTFQHSSSGLQSVSSLGHSSATSA-SLPFVPFVMGGAA 2099
Score = 39 (18.8 bits), Expect = 1.1e-138, Sum P(3) = 1.1e-138
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDG 805
++ N++K E+Q +E H E +P + +DG
Sbjct: 1904 KKGNRKKLVELEVQCMEEPNHLDVDLETRIPVINKVDG 1941
Score = 37 (18.1 bits), Expect = 1.6e-143, Sum P(3) = 1.6e-143
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1285 RRAETDMYSQAQP 1297
RRAE +M+ Q P
Sbjct: 1951 RRAELEMWLQGHP 1963
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 1350 (480.3 bits), Expect = 2.9e-143, Sum P(3) = 2.9e-143
Identities = 309/800 (38%), Positives = 470/800 (58%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W + ++L+ K++ K RF+ +++ ++ +
Sbjct: 667 EFFVKYKNYSYLHCEWATISQLEK---DKRIHQKLK------RFKTKMAQMRHFFHEDEE 717
Query: 75 EMDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
+ D + +V+RI+ + S D +G YLVKW L Y ++TWE E +D +
Sbjct: 718 PFNPDYV----EVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGK 771
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I E+K ++ E K V+ R + A +KL+ E+ +LR+YQLEG+N+L+ +W
Sbjct: 772 IREFKRIQSRHPEL-KRVN--RPQASA-WKKLELSHEYKNRNQLREYQLEGVNWLLFNWY 827
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + N I GPFLV+ PLST++NW +EF W MN
Sbjct: 828 NRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWTE-MN 885
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPI----KFNTLLTTYEVVLKDKAVLSKIKWNYL 309
IVY G+ ASR++ QQYE Y GR I KF+ L+TT+E++L D L +I+W +
Sbjct: 886 TIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCV 945
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L +L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ +F
Sbjct: 946 IIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEF 1005
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
++++ +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 1006 LKDFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRA 1063
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS-----INDTS 483
ILE+NF L+KG N +LLN ++EL+KCCNHP+L A+ + I
Sbjct: 1064 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDF 1123
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
L+ ++ S+GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1124 HLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 1183
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 603
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1184 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1243
Query: 604 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNEL 662
HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q ++ +G+ +Q E+
Sbjct: 1244 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEI 1303
Query: 663 SAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA 722
+LR GA E+ +DE SK DID ++F +
Sbjct: 1304 EDLLRKGAYAAIMEE-DDEGSK--FCEEDIDQILLRRTTTITIESEGKGSTFAKASFVAS 1360
Query: 723 -NFCGAE-DDGSFWSRWIKPEAV----AQAEDALA---PRAARNTKSYAEANEPERSNKR 773
N DD +FW +W K + +++ L PR + T+ ++ + +
Sbjct: 1361 ENRTDISLDDPNFWQKWAKKADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFS 1420
Query: 774 KKKGSELQEPQERVHKRRKA 793
+ + + P+ R H R A
Sbjct: 1421 DLESEDDERPRSRRHDRHHA 1440
Score = 88 (36.0 bits), Expect = 2.9e-143, Sum P(3) = 2.9e-143
Identities = 70/331 (21%), Positives = 126/331 (38%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E E +R +R +A F + + Q R W+ +R+ T FY
Sbjct: 1757 QRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIA---RREKQQR-WT-----RREQTDFY 1807
Query: 828 RAVMKFGNQSQISLIAR--DAGGAVATAPQ---EVVVELFDILIDGCREAVEVGSPDPKG 882
R V FG + + D A + E + + F + CR+ +
Sbjct: 1808 RVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLPPAAGDE 1867
Query: 883 PPLLDFFGVSV---KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGW 939
PP + F + +A+ + R+E L+ L +++ + P+ + R L+ +P W
Sbjct: 1868 PPDPNLFIEPITEERASRTLYRIELLRRLREQVLCH--PLLEDR-LALCQPPGPELPKWW 1924
Query: 940 NQF-DDARLLLGIHYHGFGNWE-NIRLDERLG-LTKKIAPVELQHHETFLPRAPNLKERA 996
D LL G HG + NI D L ++ +Q+H+ P AP+L +
Sbjct: 1925 EPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMN--YMQNHQAGAP-APSLSRCS 1981
Query: 997 NALLEMELXXXXXXXXXXXXXRKASKKGREKSENILNMPISRLKRDK----KGKPGSAKV 1052
LL + K E + + ++ LK + + +P
Sbjct: 1982 TPLLHQQYTSRTASPLPLRPDAPVEKSPEETATQVPSLESLTLKLEHEVVARSRPTPQDY 2041
Query: 1053 NFQTT-KDRFHKPQRVEQPLTKEEGEMSDNE 1082
+ + D R P+ E+ + SD+E
Sbjct: 2042 EMRVSPSDTTPLVSRSVPPVKLEDEDDSDSE 2072
Score = 65 (27.9 bits), Expect = 7.7e-141, Sum P(3) = 7.7e-141
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 922 FRVLSYLK-PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKK 973
F V+ L+ P+ W W+ D LL+G+ HG+ + +R D L +K
Sbjct: 1612 FPVVDQLEVPTTW-----WDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEK 1659
Score = 37 (18.1 bits), Expect = 2.9e-143, Sum P(3) = 2.9e-143
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1285 RRAETDMYSQAQP 1297
RRAE +M+ Q P
Sbjct: 2333 RRAELEMWLQGHP 2345
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 1357 (482.7 bits), Expect = 3.3e-143, Sum P(3) = 3.3e-143
Identities = 324/839 (38%), Positives = 479/839 (57%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHCQW S EL K++ K RF+ + + L+++
Sbjct: 63 EFYVKYKNFSYLHCQWASVEELDK---DKRIQQKIK------RFKAKQGQNKF-LSEIDD 112
Query: 75 EM-DLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
E+ + D + +++RI+ S D +G YLVKW L Y ++TWE + ID A+
Sbjct: 113 ELFNPDYV----EIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAK-- 166
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I+E+ E M+ + +M ++R +K + E+ KLR+YQLEG+N+L+ +W
Sbjct: 167 IEEF---EKLMSREPEMERVERPPAD-DWKKSESSREYKNNNKLREYQLEGVNWLLFNWY 222
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + + I GPFLV+ PLST+ NW +EFR W +N
Sbjct: 223 NTRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LN 280
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNYL 309
V+VY G++ASR Q YE Y GR IK F+ ++TT+E++L D L I W +
Sbjct: 281 VVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCV 340
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ F
Sbjct: 341 VIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTF 400
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
+Q + +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 401 MQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRA 458
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGY---GGDTSINDTS-- 483
ILE+NF L+KG + N +LLN ++EL+KCCNHP+L A+ +T D+
Sbjct: 459 ILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDF 518
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
+L+ +I ++GKLV++DKLL +L HRVLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 519 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 578
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 603
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 579 RGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 638
Query: 604 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNEL 662
HRIGQ + V IYR +T S E ++ ++A K+ LD V+Q ++ E + +Q E+
Sbjct: 639 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEI 698
Query: 663 SAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA 722
+LR GA D DE SK DID ++F +
Sbjct: 699 EDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILLRRTHTITIESEGKGSTFAKASFVAS 755
Query: 723 -NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSYAEANEPE----- 768
N DD +FW +W K +A+ + + PR + T+ Y+ E E
Sbjct: 756 GNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKEDELMEFS 815
Query: 769 --RSNKRKKKGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNLSKRDAT 824
S+ +K ++ + PQ++ ++E F V + G S+G KR T
Sbjct: 816 DLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGRY-KRQLT 873
Score = 65 (27.9 bits), Expect = 3.3e-143, Sum P(3) = 3.3e-143
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
P++W W++ D LL+G+ HG+ + ++R D L +++
Sbjct: 1020 PADW-----WDKEADKSLLIGVFKHGYEKYNSMRADSTLCFLERV 1059
Score = 61 (26.5 bits), Expect = 8.6e-143, Sum P(3) = 8.6e-143
Identities = 41/198 (20%), Positives = 78/198 (39%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E +R +R + E + + + W+ +R+ FY
Sbjct: 1158 QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWT-----RREEADFY 1212
Query: 828 RAVMKFGN-----QSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVG-SPDPK 881
R V FG + Q A + E + + F+ ++ CR + PD +
Sbjct: 1213 RVVSTFGIIFDPIKHQFDWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDE 1272
Query: 882 GPPLLDFFG--VSVKANDLINRVEELQLLAKRISRYEDPIKQFRVL--SYLKPSNWSKGC 937
P L +A+ + R+E L+ + +++ + ++ ++ S P W C
Sbjct: 1273 PPDLSTMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWE--C 1330
Query: 938 GWNQFDDARLLLGIHYHG 955
G + D LL+G HG
Sbjct: 1331 GKHDKD---LLIGAAKHG 1345
Score = 45 (20.9 bits), Expect = 3.3e-143, Sum P(3) = 3.3e-143
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 1055 QTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQRL 1114
+TT+ K + E P KE+ ++ + ++ + K+ K + C D A+ L+ +
Sbjct: 1406 KTTEQTESKVEGSENPAAKEKSDIKEETDIAD--KDTK--QDC-DAEAETGSVKCELKDI 1460
Query: 1115 QATSDNLPK 1123
+ ++D PK
Sbjct: 1461 EMSTDVDPK 1469
Score = 40 (19.1 bits), Expect = 1.1e-142, Sum P(3) = 1.1e-142
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 1239 DNDLNFSTFNRHAERQKGHKNVSTYQMTEPIHKG 1272
D +L+F +++ + +G N +T P+ G
Sbjct: 1356 DPELSFLEAHKNFAQNRGTGNANTVSSLHPVGAG 1389
Score = 38 (18.4 bits), Expect = 2.8e-138, Sum P(2) = 2.8e-138
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 774 KKKGSELQEPQERVHKRRKAE 794
K+ L P++R +RRK E
Sbjct: 1627 KEDALNLSVPRQRRRRRRKIE 1647
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 1353 (481.3 bits), Expect = 9.1e-143, Sum P(3) = 9.1e-143
Identities = 313/781 (40%), Positives = 463/781 (59%)
Query: 13 EME-FLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELND 71
EME F +K++ S+LHC+W + EL+ K ++K+ RFR ++ ++
Sbjct: 111 EMEEFYVKYRNFSYLHCKWATLEELE------KDPRISQKIK---RFRN----KQAQMKH 157
Query: 72 VSKEMDLDIIKQNS-QVERIIADRISKD-SSGNVTQEYLVKWKGLSYAEATWEKDEIIDF 129
+ E D D+ + +V+RI+ +KD +G YLVKW L Y E+TWE +E +D
Sbjct: 158 IFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDP 217
Query: 130 AQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLV 189
+ I E++A + ++ ++R + S +KL++ E+ +LR+YQLEG+N+L+
Sbjct: 218 VK--IKEFEALQIPP----EIKHMERPASE-SWQKLEKSREYKNSNQLREYQLEGMNWLL 270
Query: 190 NSWRNDTNVILADEMGLGKTVQSVSMLG--FLQNAQQIPGPFLVVVPLSTLSNWAKEFRK 247
+W N N ILADEMGLGKT+QS++ L FL I GPFL++ PLST++NW +EFR
Sbjct: 271 FNWYNRKNCILADEMGLGKTIQSITFLSEIFLMG---IHGPFLIIAPLSTITNWEREFRT 327
Query: 248 WLPTMNVIVYVGTRASREVCQQYEF-YNDKKVGRPI----KFNTLLTTYEVVLKDKAVLS 302
W MN IVY G++ SR++ QQYE Y D + G P+ KF ++TT+E++L D L
Sbjct: 328 WTE-MNAIVYHGSQISRQMIQQYEMVYRDTQ-GNPLPGIFKFQVVITTFEMILADCPELK 385
Query: 303 KIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDK 362
KI+W +++DEAHRLKN +L L + ++K+L+TGTPLQNSVEEL++LL+FL+ +
Sbjct: 386 KIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQ 445
Query: 363 FKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPL 422
F S+ F++ + +L + E ++ L L+P +LRR+ DVEK+L PK E I+ VE++ +
Sbjct: 446 FPSETAFLEEFGDLKT--EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNI 503
Query: 423 QKQYYKWILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD---TS 478
QK+YY+ ILE+NF L+KG + N +L+N ++EL+KCCNHP+L A+ D T
Sbjct: 504 QKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTH 563
Query: 479 INDTS--KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQF 536
+ +L+ +I ++GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + +
Sbjct: 564 SPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTY 623
Query: 537 QRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQND 596
+R+DG + LR A+D F P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQND
Sbjct: 624 ERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQND 683
Query: 597 LQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQ 656
LQA +R HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q +N +G +Q
Sbjct: 684 LQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQ 743
Query: 657 RKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXX 716
E+ +LR GA D DE SK DID
Sbjct: 744 LSKMEVEDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILQRRTQTITIQSEGKGSTFAK 800
Query: 717 SAFKVA-NFCGAE-DDGSFWSRWIK-----PEAVAQAEDALA--PRAARNTKSYAEANEP 767
++F + N DD +FW +W K +A + E + PR + TK Y E
Sbjct: 801 ASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEED 860
Query: 768 E 768
E
Sbjct: 861 E 861
Score = 59 (25.8 bits), Expect = 9.1e-143, Sum P(3) = 9.1e-143
Identities = 42/186 (22%), Positives = 73/186 (39%)
Query: 819 SKRDATRFYRAVMKFG---NQSQISLIARD--AGGAVATAPQEVVVELFDILIDGCREAV 873
++R+ FYR V FG +Q + + A + E + + F + C+
Sbjct: 1244 TRREQADFYRTVSSFGVIYDQEKKTFDWTQFRAISRLEKKTDESLEKYFYSFVAMCKNVC 1303
Query: 874 EVGSPDPKGPPLLDFFGVSV---KANDLINRVEELQLLAKRISR---YEDPIKQFRVLSY 927
+ GPP D + + +A + R+E L+ + +++ + + +K R Y
Sbjct: 1304 GLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHERLKLCRPSLY 1363
Query: 928 LKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWEN-IRLDERLGLTKKIAPVELQHHETFL 986
L P W CG + D LL+G HG + I D +L QH T +
Sbjct: 1364 L-PVWWE--CGKHDRD---LLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYA-QHKRTGI 1416
Query: 987 PRAPNL 992
P + L
Sbjct: 1417 PGSETL 1422
Score = 57 (25.1 bits), Expect = 1.5e-142, Sum P(3) = 1.5e-142
Identities = 19/85 (22%), Positives = 33/85 (38%)
Query: 944 DARLLLGIHYHGFGNWENIRLDERLGLTKKIA-PVE--LQHHETFLPRAPNLKERANALL 1000
D LL+G+ HG+ + +R D L +K+ P E L + A + ER+ L
Sbjct: 1082 DKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGISDGAQDTAERSELCL 1141
Query: 1001 EMELXXXXXXXXXXXXXRKASKKGR 1025
+ + ++GR
Sbjct: 1142 RRAVRGEGSNVDESVTGNREHRQGR 1166
Score = 40 (19.1 bits), Expect = 9.1e-143, Sum P(3) = 9.1e-143
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 1210 QIYSKLKQERQEEAGIGPSHINGSASGSIDNDLN 1243
Q + L QE+ EA GPS + ++D N
Sbjct: 1529 QRFINLLQEKGMEAKAGPSQSHSEEDEEEEDDDN 1562
Score = 40 (19.1 bits), Expect = 9.2e-141, Sum P(3) = 9.2e-141
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1075 EGEMSDNEEVYEQFKEVKWMEWC--EDVMADE 1104
+G+ + N+ + + K W+ C E V+ D+
Sbjct: 982 KGKKTKNQMLLPEIKNADWLATCNPEVVLHDD 1013
Score = 39 (18.8 bits), Expect = 1.0e-138, Sum P(2) = 1.0e-138
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 1274 DPKKFEAWKRRRRAETDMYSQAQPM-LQRP 1302
DP ++ W + +TD ++ + + + RP
Sbjct: 816 DPNFWQKWAKIAELDTDAKNEKESLVIDRP 845
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 1353 (481.3 bits), Expect = 9.5e-143, Sum P(3) = 9.5e-143
Identities = 313/781 (40%), Positives = 463/781 (59%)
Query: 13 EME-FLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELND 71
EME F +K++ S+LHC+W + EL+ K ++K+ RFR ++ ++
Sbjct: 111 EMEEFYVKYRNFSYLHCKWATLEELE------KDPRISQKIK---RFRN----KQAQMKH 157
Query: 72 VSKEMDLDIIKQNS-QVERIIADRISKD-SSGNVTQEYLVKWKGLSYAEATWEKDEIIDF 129
+ E D D+ + +V+RI+ +KD +G YLVKW L Y E+TWE +E +D
Sbjct: 158 IFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDP 217
Query: 130 AQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLV 189
+ I E++A + ++ ++R + S +KL++ E+ +LR+YQLEG+N+L+
Sbjct: 218 VK--IKEFEALQIPP----EIKHMERPASE-SWQKLEKSREYKNSNQLREYQLEGMNWLL 270
Query: 190 NSWRNDTNVILADEMGLGKTVQSVSMLG--FLQNAQQIPGPFLVVVPLSTLSNWAKEFRK 247
+W N N ILADEMGLGKT+QS++ L FL I GPFL++ PLST++NW +EFR
Sbjct: 271 FNWYNRKNCILADEMGLGKTIQSITFLSEIFLMG---IHGPFLIIAPLSTITNWEREFRT 327
Query: 248 WLPTMNVIVYVGTRASREVCQQYEF-YNDKKVGRPI----KFNTLLTTYEVVLKDKAVLS 302
W MN IVY G++ SR++ QQYE Y D + G P+ KF ++TT+E++L D L
Sbjct: 328 WTE-MNAIVYHGSQISRQMIQQYEMVYRDTQ-GNPLPGIFKFQVVITTFEMILADCPELK 385
Query: 303 KIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDK 362
KI+W +++DEAHRLKN +L L + ++K+L+TGTPLQNSVEEL++LL+FL+ +
Sbjct: 386 KIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQ 445
Query: 363 FKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPL 422
F S+ F++ + +L + E ++ L L+P +LRR+ DVEK+L PK E I+ VE++ +
Sbjct: 446 FPSETAFLEEFGDLKT--EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNI 503
Query: 423 QKQYYKWILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD---TS 478
QK+YY+ ILE+NF L+KG + N +L+N ++EL+KCCNHP+L A+ D T
Sbjct: 504 QKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTH 563
Query: 479 INDTS--KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQF 536
+ +L+ +I ++GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + +
Sbjct: 564 SPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTY 623
Query: 537 QRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQND 596
+R+DG + LR A+D F P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQND
Sbjct: 624 ERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQND 683
Query: 597 LQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQ 656
LQA +R HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q +N +G +Q
Sbjct: 684 LQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQ 743
Query: 657 RKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXX 716
E+ +LR GA D DE SK DID
Sbjct: 744 LSKMEVEDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILQRRTQTITIQSEGKGSTFAK 800
Query: 717 SAFKVA-NFCGAE-DDGSFWSRWIK-----PEAVAQAEDALA--PRAARNTKSYAEANEP 767
++F + N DD +FW +W K +A + E + PR + TK Y E
Sbjct: 801 ASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEED 860
Query: 768 E 768
E
Sbjct: 861 E 861
Score = 59 (25.8 bits), Expect = 9.5e-143, Sum P(3) = 9.5e-143
Identities = 42/186 (22%), Positives = 73/186 (39%)
Query: 819 SKRDATRFYRAVMKFG---NQSQISLIARD--AGGAVATAPQEVVVELFDILIDGCREAV 873
++R+ FYR V FG +Q + + A + E + + F + C+
Sbjct: 1244 TRREQADFYRTVSSFGVIYDQEKKTFDWTQFRAISRLEKKTDESLEKYFYSFVAMCKNVC 1303
Query: 874 EVGSPDPKGPPLLDFFGVSV---KANDLINRVEELQLLAKRISR---YEDPIKQFRVLSY 927
+ GPP D + + +A + R+E L+ + +++ + + +K R Y
Sbjct: 1304 GLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHERLKLCRPSLY 1363
Query: 928 LKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWEN-IRLDERLGLTKKIAPVELQHHETFL 986
L P W CG + D LL+G HG + I D +L QH T +
Sbjct: 1364 L-PVWWE--CGKHDRD---LLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYA-QHKRTGI 1416
Query: 987 PRAPNL 992
P + L
Sbjct: 1417 PGSETL 1422
Score = 57 (25.1 bits), Expect = 1.5e-142, Sum P(3) = 1.5e-142
Identities = 19/85 (22%), Positives = 33/85 (38%)
Query: 944 DARLLLGIHYHGFGNWENIRLDERLGLTKKIA-PVE--LQHHETFLPRAPNLKERANALL 1000
D LL+G+ HG+ + +R D L +K+ P E L + A + ER+ L
Sbjct: 1082 DKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGISDGAQDTAERSELCL 1141
Query: 1001 EMELXXXXXXXXXXXXXRKASKKGR 1025
+ + ++GR
Sbjct: 1142 RRAVRGEGSNVDESVTGNREHRQGR 1166
Score = 40 (19.1 bits), Expect = 9.5e-143, Sum P(3) = 9.5e-143
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 1210 QIYSKLKQERQEEAGIGPSHINGSASGSIDNDLN 1243
Q + L QE+ EA GPS + ++D N
Sbjct: 1529 QRFINLLQEKGMEAKAGPSQSHSEEDEEEEDDDN 1562
Score = 40 (19.1 bits), Expect = 9.5e-141, Sum P(3) = 9.5e-141
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1075 EGEMSDNEEVYEQFKEVKWMEWC--EDVMADE 1104
+G+ + N+ + + K W+ C E V+ D+
Sbjct: 982 KGKKTKNQMLLPEIKNADWLATCNPEVVLHDD 1013
Score = 39 (18.8 bits), Expect = 1.0e-138, Sum P(2) = 1.0e-138
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 1274 DPKKFEAWKRRRRAETDMYSQAQPM-LQRP 1302
DP ++ W + +TD ++ + + + RP
Sbjct: 816 DPNFWQKWAKIAELDTDAKNEKESLVIDRP 845
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 1241 (441.9 bits), Expect = 2.4e-142, Sum P(3) = 2.4e-142
Identities = 260/532 (48%), Positives = 355/532 (66%)
Query: 163 RKLDEQPEWLRG-G-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQ 220
+K ++QP +L G G +L YQ+EG+N+L SW + ILADEMGLGKT+Q+V+ L L
Sbjct: 714 KKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLY 773
Query: 221 NAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDK---- 276
GPFLV VPLSTL NW +EF W P I Y+G + SR V ++ E ++
Sbjct: 774 KEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIR 833
Query: 277 --KVGR----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSE 330
KV R KFN LLT+YE++ D A L I W L+VDEAHRLK+++++ + L+
Sbjct: 834 GSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNS 893
Query: 331 FSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHME 390
++ KLL+TGTPLQN++EEL+ LL+FL DKF F + ++S E ++ LH
Sbjct: 894 YTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK--EEQVKRLHEM 951
Query: 391 LRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLL 450
L PH+LRR+ DV K++P K E I+RVE+S +QK++YK+IL +N+ LN G SL+
Sbjct: 952 LGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLI 1011
Query: 451 NIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKH 510
NI+++LKKCCNHP+LF SA T+ ++ + ++GKLV+L K+L +L H
Sbjct: 1012 NIMMDLKKCCNHPYLFPSAAEE--ATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNH 1069
Query: 511 RVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTR 570
RVLIFSQM +MLDIL +++ + ++++R+DG LR +A+D FNAPG++ F FLLSTR
Sbjct: 1070 RVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTR 1129
Query: 571 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 630
AGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ V IYRFVT SVEE + +
Sbjct: 1130 AGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQV 1189
Query: 631 AKKKMVLDHLVIQK-LNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDE 681
AK+KM+L HLV++ + +G+ KQ EL ILRFG E+LFKED +E
Sbjct: 1190 AKRKMMLTHLVVRPGMGGKGA-NFTKQ----ELDDILRFGTEDLFKEDDKEE 1236
Score = 141 (54.7 bits), Expect = 2.4e-142, Sum P(3) = 2.4e-142
Identities = 43/174 (24%), Positives = 87/174 (50%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQ-----NLSGFKKVLNYAK--KVVE-----DVRFRKMV 62
E+ IKW S+ HC+W +L + F++ + + K E D R++++
Sbjct: 522 EYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQ 581
Query: 63 SREE---IELNDVSKEMDLDIIKQNSQVERIIADR-ISKDSSGNVTQEYLVKWKGLSYAE 118
++ ++ ND ++ ++ K + E +I R I+ ++ + + YLVKW+ L Y +
Sbjct: 582 RHKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDK 641
Query: 119 ATWEKD-EIIDFAQDAIDEYK-AREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+TWE++ + I + AID Y+ R +E + + KKG+ S K+++ +
Sbjct: 642 STWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDED 695
Score = 73 (30.8 bits), Expect = 2.4e-142, Sum P(3) = 2.4e-142
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVE------LQHHETFLPRAPNL 992
W++ D LL GI HG+G W++I+ D R + + ++ L+ FL R L
Sbjct: 1759 WHRRHDYWLLAGIVTHGYGRWQDIQNDIRFAIINEPFKMDVGKGNFLEIKNKFLARRFKL 1818
Query: 993 KERANALLEMEL 1004
E+A ++E +L
Sbjct: 1819 LEQA-LVIEEQL 1829
Score = 63 (27.2 bits), Expect = 3.9e-134, Sum P(3) = 3.9e-134
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 96 SKDSSGNVTQEYLVKWKGLSYAEATWEKDEIID 128
SK+S+ V +EY +KW +SY W + +D
Sbjct: 513 SKNSNSRV-REYFIKWHNMSYWHCEWVPEVQLD 544
Score = 51 (23.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 1037 SRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYE---------Q 1087
SR K+ KKG+ KV + H E+P T + + D E Q
Sbjct: 675 SRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQ 734
Query: 1088 FKEVKWME--W---CEDVMADEI 1105
+ + W+ W + ++ADE+
Sbjct: 735 IEGINWLRYSWGQGIDTILADEM 757
Score = 50 (22.7 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILR 667
+QE+ +I RF T +ED E A D V + L+ +K+ NE + +
Sbjct: 1214 KQELDDILRFGTEDLFKEDDKEEAIHYD--DKAVAELLDRTNRGIEEKESWANEYLSSFK 1271
Query: 668 FGAEELFKEDRNDEESK 684
A KE+ +EE++
Sbjct: 1272 V-ASYATKEEEEEEETE 1287
Score = 43 (20.2 bits), Expect = 5.0e-132, Sum P(3) = 5.0e-132
Identities = 17/77 (22%), Positives = 34/77 (44%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQR- 155
+++ N +E + AE + + D + D D+Y ++ ++GK ++
Sbjct: 5 EENDDNFQEEEEAQEDNAPAAELSNDSDAPLKPNNDEDDDYDPEDSRRKKKGKKRKTRKG 64
Query: 156 -KKG-KASLRKLDEQPE 170
+KG K RK +E E
Sbjct: 65 EEKGRKKKKRKKNESEE 81
Score = 42 (19.8 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K E V + + L P R K+ N P +S + EL Q++ +K
Sbjct: 941 KEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRV--ELSAMQKKFYK 989
Score = 37 (18.1 bits), Expect = 2.1e-131, Sum P(3) = 2.1e-131
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 113 GLSYAEATWEKDEIIDFAQDAIDEY------KAREAAMAEQ--GKMVDLQRKKGKASL 162
G S ++ E + ++ + D+ DE KA +A A Q G + RKK K +
Sbjct: 293 GASERDSDLEFERMLQKSDDSADEKEAPVSSKADNSAPAAQDDGSGAPVVRKKAKTKI 350
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 1339 (476.4 bits), Expect = 2.9e-142, Sum P(3) = 2.9e-142
Identities = 308/798 (38%), Positives = 470/798 (58%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W + ++L+ K++ K RF+ +++ ++ +
Sbjct: 620 EFFVKYKNYSYLHCEWATISQLEK---DKRIHQKLK------RFKTKMAQMRHFFHEDEE 670
Query: 75 EMDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
+ D + +V+RI+ + S D +G YLVKW L Y ++TWE E +D +
Sbjct: 671 PFNPDYV----EVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGK 724
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I E+K ++ E K V+ R + A +KL+ E+ +LR+YQLEG+N+L+ +W
Sbjct: 725 IREFKRIQSRHPEL-KRVN--RPQASA-WKKLELSHEYKNRNQLREYQLEGVNWLLFNWY 780
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + N I GPFLV+ PLST++NW +EF W MN
Sbjct: 781 NRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWTE-MN 838
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPI----KFNTLLTTYEVVLKDKAVLSKIKWNYL 309
IVY G+ ASR++ QQYE Y GR I KF+ L+TT+E++L D L +I+W +
Sbjct: 839 TIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCV 898
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L +L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ +F
Sbjct: 899 IIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEF 958
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
++++ +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 959 LKDFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRA 1016
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFES-ADHGYGGDTS-----INDT 482
ILE+NF L+KG N +LLN ++EL+KCCNHP+L + A+ + I
Sbjct: 1017 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHD 1076
Query: 483 SKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
L+ ++ S+GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1077 FHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGR 1136
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1137 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1196
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNE 661
HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q ++ +G+ +Q E
Sbjct: 1197 CHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKE 1256
Query: 662 LSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKV 721
+ +LR GA E+ +DE SK DID ++F
Sbjct: 1257 IEDLLRKGAYAAIMEE-DDEGSK--FCEEDIDQILLRRTTTITIESEGKGSTFAKASFVA 1313
Query: 722 A-NFCGAE-DDGSFWSRWIKPEAV----AQAEDALA---PRAARNTKSYAEANEPERSNK 772
+ N DD +FW +W K + +++ L PR + T+ ++ + +
Sbjct: 1314 SENRTDISLDDPNFWQKWAKKADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEF 1373
Query: 773 RKKKGSELQEPQERVHKR 790
+ + + P+ R H R
Sbjct: 1374 SDLESEDDERPRSRRHDR 1391
Score = 88 (36.0 bits), Expect = 2.9e-142, Sum P(3) = 2.9e-142
Identities = 70/331 (21%), Positives = 126/331 (38%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E E +R +R +A F + + Q R W+ +R+ T FY
Sbjct: 1711 QRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIA---RREKQQR-WT-----RREQTDFY 1761
Query: 828 RAVMKFGNQSQISLIAR--DAGGAVATAPQ---EVVVELFDILIDGCREAVEVGSPDPKG 882
R V FG + + D A + E + + F + CR+ +
Sbjct: 1762 RVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLPPAAGDE 1821
Query: 883 PPLLDFFGVSV---KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGW 939
PP + F + +A+ + R+E L+ L +++ + P+ + R L+ +P W
Sbjct: 1822 PPDPNLFIEPITEERASRTLYRIELLRRLREQVLCH--PLLEDR-LALCQPPGPELPKWW 1878
Query: 940 NQF-DDARLLLGIHYHGFGNWE-NIRLDERLG-LTKKIAPVELQHHETFLPRAPNLKERA 996
D LL G HG + NI D L ++ +Q+H+ P AP+L +
Sbjct: 1879 EPIRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMN--YMQNHQAGAP-APSLSRCS 1935
Query: 997 NALLEMELXXXXXXXXXXXXXRKASKKGREKSENILNMPISRLKRDK----KGKPGSAKV 1052
LL + K E + + ++ LK + + +P
Sbjct: 1936 TPLLHQQYTSRTASPLPLRPDAPVEKPPEETAAQVPSLESLTLKLEHEVVARSRPTPQDY 1995
Query: 1053 NFQTT-KDRFHKPQRVEQPLTKEEGEMSDNE 1082
+ + D R P+ E+ + SD+E
Sbjct: 1996 DMRVAPSDTTPLVSRSVPPVKLEDEDDSDSE 2026
Score = 65 (27.9 bits), Expect = 7.7e-140, Sum P(3) = 7.7e-140
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 922 FRVLSYLK-PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKK 973
F V+ L+ P+ W W+ D LL+G+ HG+ + +R D L +K
Sbjct: 1566 FPVVDQLEVPTTW-----WDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEK 1613
Score = 38 (18.4 bits), Expect = 2.9e-142, Sum P(3) = 2.9e-142
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 1335 PMRQTGFPPRQG 1346
PM Q GFP G
Sbjct: 2079 PMSQDGFPNEDG 2090
Score = 37 (18.1 bits), Expect = 3.7e-142, Sum P(3) = 3.7e-142
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1285 RRAETDMYSQAQP 1297
RRAE +M+ Q P
Sbjct: 2288 RRAELEMWLQGHP 2300
Score = 37 (18.1 bits), Expect = 8.8e-136, Sum P(2) = 8.8e-136
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 771 NKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASA 808
N + S LQ H + S+P +PF+ G +A
Sbjct: 2400 NTFQHSSSGLQSVSSLGHSSATSA-SLPFMPFVMGGAA 2436
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 1347 (479.2 bits), Expect = 5.4e-142, Sum P(3) = 5.4e-142
Identities = 306/797 (38%), Positives = 468/797 (58%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W + ++L+ K++ K RF+ +++ ++ +
Sbjct: 669 EFFVKYKNYSYLHCEWATISQLEK---DKRIHQKLK------RFKTKMAQMRHFFHEDEE 719
Query: 75 EMDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
+ D + +V+RI+ + S D +G YLVKW L Y ++TWE E +D +
Sbjct: 720 PFNPDYV----EVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGK 773
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I E+K ++ E ++ R + A +KL+ E+ +LR+YQLEG+N+L+ +W
Sbjct: 774 IREFKRIQSRHPELRRV---NRPQANA-WKKLELSHEYKNRNQLREYQLEGVNWLLFNWY 829
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + N I GPFLV+ PLST++NW +EF W MN
Sbjct: 830 NRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWTE-MN 887
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPI----KFNTLLTTYEVVLKDKAVLSKIKWNYL 309
IVY G+ ASR++ QQYE Y GR I KF+ L+TT+E++L D L +I+W +
Sbjct: 888 TIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCV 947
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L +L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ +F
Sbjct: 948 IIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEF 1007
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
++++ +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 1008 LKDFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRA 1065
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS-----INDTS 483
ILE+NF L+KG N +LLN ++EL+KCCNHP+L A+ + I
Sbjct: 1066 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDF 1125
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
L+ ++ S+GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1126 HLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 1185
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 603
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1186 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1245
Query: 604 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNEL 662
HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q ++ +G+ +Q E+
Sbjct: 1246 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEI 1305
Query: 663 SAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA 722
+LR GA E+ +DE SK DID ++F +
Sbjct: 1306 EDLLRKGAYAAIMEE-DDEGSK--FCEEDIDQILLRRTTTITIESEGKGSTFAKASFVAS 1362
Query: 723 -NFCGAE-DDGSFWSRWIKPEAV----AQAEDALA---PRAARNTKSYAEANEPERSNKR 773
N DD +FW +W K + +++ L PR + T+ ++ + +
Sbjct: 1363 ENRTDISLDDPNFWQKWAKKADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFS 1422
Query: 774 KKKGSELQEPQERVHKR 790
+ + + P+ R H R
Sbjct: 1423 DLESEDDERPRSRRHDR 1439
Score = 78 (32.5 bits), Expect = 5.4e-142, Sum P(3) = 5.4e-142
Identities = 60/284 (21%), Positives = 105/284 (36%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E E +R +R +A F + + Q R W+ +R+ T FY
Sbjct: 1759 QRSYKREQMKMEAAERGDRRRRRCEAAFKLKEIA---RREKQQR-WT-----RREQTDFY 1809
Query: 828 RAVMKFG-----NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPDPKG 882
R V FG + Q + E + + F + CR+ +
Sbjct: 1810 RVVSTFGVEYDPDNMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLPPAAGDE 1869
Query: 883 PPLLDFFGVSV---KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGW 939
PP + F + +A+ + R+E L+ L +++ + P+ + R L+ +P W
Sbjct: 1870 PPDPNLFIEPITEERASRTLYRIELLRRLREQVLCH--PLLEDR-LALCQPPGLELPKWW 1926
Query: 940 NQF-DDARLLLGIHYHGFGNWE-NIRLDERLG-LTKKIAPVELQHHETFLPRAPNLKERA 996
D LL G HG + NI D L ++ +Q+H+ A +L +
Sbjct: 1927 EPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMN--YMQNHQAGASAA-SLSRCS 1983
Query: 997 NALLEMELXXXXXXXXXXXXXRKASKKGREKSENILNMPISRLK 1040
LL + K E + + N+ LK
Sbjct: 1984 TPLLHQQCTSRTASPSPLRPDAPVEKSPEESTVQVPNLESLTLK 2027
Score = 65 (27.9 bits), Expect = 1.3e-140, Sum P(3) = 1.3e-140
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 922 FRVLSYLK-PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKK 973
F V+ L+ P+ W W+ D LL+G+ HG+ + +R D L +K
Sbjct: 1614 FPVVDQLEVPTTW-----WDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEK 1661
Score = 43 (20.2 bits), Expect = 3.2e-137, Sum P(2) = 3.2e-137
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 771 NKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASA 808
N + S LQ H + S+P +PF+ GA+A
Sbjct: 2447 NTFQHSSSNLQSVSSLGHSSTTSA-SLPFMPFVMGAAA 2483
Score = 38 (18.4 bits), Expect = 5.4e-142, Sum P(3) = 5.4e-142
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 1268 PIHKGIDPKKFEAWKRRRRAETDMYSQAQP 1297
P+ +D + RRAE +M+ Q P
Sbjct: 2318 PVINKVDGTLLVGDEAPRRAELEMWLQGHP 2347
Score = 37 (18.1 bits), Expect = 1.4e-136, Sum P(2) = 1.4e-136
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDG 805
++ N++K E++ +E H E +P + +DG
Sbjct: 2288 KKGNRKKLVELEVECMEEPNHLDLDLETRIPVINKVDG 2325
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 1365 (485.6 bits), Expect = 5.9e-142, Sum P(3) = 5.9e-142
Identities = 305/744 (40%), Positives = 447/744 (60%)
Query: 12 NEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKV-VEDVRFRKMVSREEIELN 70
N EF +K+K S++HC+W A L+ L K++ K+ + + R + +E N
Sbjct: 700 NVEEFFVKYKNYSYMHCEW---ASLEQLERDKRIHQKLKRFKTKQAQMRNLFQEDEEPFN 756
Query: 71 DVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFA 130
E+D I+ ++ V+ KD+ G YLVKW L Y +ATWE E +D
Sbjct: 757 PDYVEVDR-ILDESHSVD--------KDN-GEPVVYYLVKWCSLPYEDATWELKEDVD-- 804
Query: 131 QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVN 190
+ ++E++ E+ Q ++ R A +KLDE E+ G +LR+YQLEG+N+L+
Sbjct: 805 EGKVEEFRKIES---RQPRLKRTPRPAASA-WKKLDESTEYKNGNQLREYQLEGVNWLLF 860
Query: 191 SWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLP 250
+W N N ILADEMGLGKT+QS+++L + +A + PF+++ PLST++NW +EF W
Sbjct: 861 NWYNRQNCILADEMGLGKTIQSIALLSEMFSAG-VQSPFMIIAPLSTITNWEREFSNWTD 919
Query: 251 TMNVIVYVGTRASREVCQQYEFY-NDKK---VGRPIKFNTLLTTYEVVLKDKAVLSKIKW 306
MN IVY G+ ASR++ QQYE Y D K + KF+ L+TT+E++L D L +I W
Sbjct: 920 -MNAIVYHGSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALITTFEMILSDCPELREISW 978
Query: 307 NYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSK 366
+++DEAHRLKN +L +L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+
Sbjct: 979 RCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSE 1038
Query: 367 DDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQY 426
+F++ + +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+Y
Sbjct: 1039 IEFLREFGDLKT--EEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKY 1096
Query: 427 YKWILERNFHDLNKGV--RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDT-SINDTS 483
Y+ ILERNF L+ G N +LLN ++EL+KCCNHP+L A+ + + D
Sbjct: 1097 YRAILERNFSFLSMGATQNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPL 1156
Query: 484 K----LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRL 539
L+ ++ S+GKLV+LDKLL RL H+VLIFSQMVR LDIL +Y+ +K + ++R+
Sbjct: 1157 APDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERI 1216
Query: 540 DGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA 599
DG + LR A+D F+ P S+ F FLL TRAGGLGINL ADT +IFDSDWNPQNDLQA
Sbjct: 1217 DGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQA 1276
Query: 600 MSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKL--NAEGSWRRKKQR 657
+R HRIGQ + V +YR +T S E ++L++A K+ LD V+Q + N E S ++ ++
Sbjct: 1277 QARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKESSIQQFSKK 1336
Query: 658 KGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXS 717
E+ +LR GA D NDE S R DID +
Sbjct: 1337 ---EIEDLLRKGAYAAIM-DENDEGS--RFCEEDIDQILQRRATTITIESEGKGSTFSKA 1390
Query: 718 AFKVA-NFCG-AEDDGSFWSRWIK 739
+F + N A DD FW +W K
Sbjct: 1391 SFVASENRTDIALDDPEFWQKWAK 1414
Score = 57 (25.1 bits), Expect = 5.9e-142, Sum P(3) = 5.9e-142
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLD 965
PS W W+ D LL+G++ HG+ + +R D
Sbjct: 1665 PSGW-----WDAEADRCLLIGVYKHGYEMYTTMRAD 1695
Score = 48 (22.0 bits), Expect = 5.2e-141, Sum P(3) = 5.2e-141
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS +R++ E E +R +RR+ E + I Q R W+ +R+ FY
Sbjct: 1803 QRSYRREQLKIEAAEKGDR--RRRRCE-QATKLKEIARQERQQR-WT-----RREECDFY 1853
Query: 828 RAVMKFG 834
R V FG
Sbjct: 1854 RVVSTFG 1860
Score = 42 (19.8 bits), Expect = 3.9e-139, Sum P(2) = 3.9e-139
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAE 794
E S ++K+K EL++ + +H R+ +
Sbjct: 2269 EGSARKKRKDHELEDAEGVLHAPRRRD 2295
Score = 40 (19.1 bits), Expect = 3.6e-140, Sum P(3) = 3.6e-140
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 931 SNWSKGCGWNQFDDARLLLGIHYHGFGNWENI 962
S+ G G+ + D R+ + +G+G W +I
Sbjct: 1476 SDRHSGGGYGRTDCFRVEKHLLVYGWGRWRDI 1507
Score = 39 (18.8 bits), Expect = 5.9e-142, Sum P(3) = 5.9e-142
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 1226 GPSH--INGSASGSIDNDLNFSTFNRHAERQKGHKNVS 1261
GPS + G G+ D+D + + + + R G + S
Sbjct: 2090 GPSERKLGGGGGGASDSDSDSDSGSSSSSRHSGSSDDS 2127
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 1339 (476.4 bits), Expect = 6.8e-142, Sum P(3) = 6.8e-142
Identities = 308/798 (38%), Positives = 470/798 (58%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W + ++L+ K++ K RF+ +++ ++ +
Sbjct: 667 EFFVKYKNYSYLHCEWATISQLEK---DKRIHQKLK------RFKTKMAQMRHFFHEDEE 717
Query: 75 EMDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
+ D + +V+RI+ + S D +G YLVKW L Y ++TWE E +D +
Sbjct: 718 PFNPDYV----EVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGK 771
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I E+K ++ E K V+ R + A +KL+ E+ +LR+YQLEG+N+L+ +W
Sbjct: 772 IREFKRIQSRHPEL-KRVN--RPQASA-WKKLELSHEYKNRNQLREYQLEGVNWLLFNWY 827
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + N I GPFLV+ PLST++NW +EF W MN
Sbjct: 828 NRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWTE-MN 885
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPI----KFNTLLTTYEVVLKDKAVLSKIKWNYL 309
IVY G+ ASR++ QQYE Y GR I KF+ L+TT+E++L D L +I+W +
Sbjct: 886 TIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCV 945
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L +L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ +F
Sbjct: 946 IIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEF 1005
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
++++ +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 1006 LKDFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRA 1063
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFES-ADHGYGGDTS-----INDT 482
ILE+NF L+KG N +LLN ++EL+KCCNHP+L + A+ + I
Sbjct: 1064 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHD 1123
Query: 483 SKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
L+ ++ S+GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1124 FHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGR 1183
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1184 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1243
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNE 661
HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q ++ +G+ +Q E
Sbjct: 1244 CHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKE 1303
Query: 662 LSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKV 721
+ +LR GA E+ +DE SK DID ++F
Sbjct: 1304 IEDLLRKGAYAAIMEE-DDEGSK--FCEEDIDQILLRRTTTITIESEGKGSTFAKASFVA 1360
Query: 722 A-NFCGAE-DDGSFWSRWIKPEAV----AQAEDALA---PRAARNTKSYAEANEPERSNK 772
+ N DD +FW +W K + +++ L PR + T+ ++ + +
Sbjct: 1361 SENRTDISLDDPNFWQKWAKKADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEF 1420
Query: 773 RKKKGSELQEPQERVHKR 790
+ + + P+ R H R
Sbjct: 1421 SDLESEDDERPRSRRHDR 1438
Score = 86 (35.3 bits), Expect = 6.8e-142, Sum P(3) = 6.8e-142
Identities = 70/331 (21%), Positives = 125/331 (37%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E E +R +R +A F + + Q R W+ +R+ T FY
Sbjct: 1758 QRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIA---RREKQQR-WT-----RREQTDFY 1808
Query: 828 RAVMKFGNQSQISLIAR--DAGGAVATAPQ---EVVVELFDILIDGCREAVEVGSPDPKG 882
R V FG + + D A + E + + F + CR+ +
Sbjct: 1809 RVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLPPAAGDE 1868
Query: 883 PPLLDFFGVSV---KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGW 939
PP + F + +A+ + R+E L+ L +++ + P+ + R L+ +P W
Sbjct: 1869 PPDPNLFIEPITEERASRTLYRIELLRRLREQVLCH--PLLEDR-LALCQPPGPELPKWW 1925
Query: 940 NQF-DDARLLLGIHYHGFGNWE-NIRLDERLG-LTKKIAPVELQHHETFLPRAPNLKERA 996
D LL G HG + NI D L ++ +Q+H+ P AP+L +
Sbjct: 1926 EPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMN--YMQNHQAGAP-APSLSRCS 1982
Query: 997 NALLEMELXXXXXXXXXXXXXRKASKKGREKSENILNMPISRLKRDK----KGKPGSAKV 1052
LL + K E + + ++ LK + + +P
Sbjct: 1983 TPLLHQQYTSRTASPLPLRPDAPVEKPPEETAAQVPSLESLTLKLEHEVVARSRPTPQDY 2042
Query: 1053 NFQTT-KDRFHKPQRVEQPLTKEEGEMSDNE 1082
+ D R P+ E+ + SD+E
Sbjct: 2043 EMRVAPSDTTPLVSRSVPPVKLEDEDDSDSE 2073
Score = 65 (27.9 bits), Expect = 1.1e-139, Sum P(3) = 1.1e-139
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 922 FRVLSYLK-PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKK 973
F V+ L+ P+ W W+ D LL+G+ HG+ + +R D L +K
Sbjct: 1613 FPVVDQLEVPTTW-----WDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEK 1660
Score = 37 (18.1 bits), Expect = 6.8e-142, Sum P(3) = 6.8e-142
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1285 RRAETDMYSQAQP 1297
RRAE +M+ Q P
Sbjct: 2335 RRAELEMWLQGHP 2347
Score = 37 (18.1 bits), Expect = 9.6e-136, Sum P(2) = 9.6e-136
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 771 NKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASA 808
N + S LQ H + S+P +PF+ G +A
Sbjct: 2447 NTFQHSSSGLQSVSSLGHSSATSA-SLPFMPFVMGGAA 2483
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 1373 (488.4 bits), Expect = 7.3e-142, Sum P(2) = 7.3e-142
Identities = 316/785 (40%), Positives = 470/785 (59%)
Query: 8 EPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEI 67
EP ++ F +K++ S+LHC+W + EL+ K A+K+ RFR ++
Sbjct: 309 EPPFDLELFYVKYRNFSYLHCKWATMEELE------KDPRIAQKIK---RFRN----KQA 355
Query: 68 ELNDVSKEMDLDIIKQNS-QVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDE 125
++ + E D D+ + +V+RI+ +KD+ +G YLVKW L Y E+TWE +E
Sbjct: 356 QMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEE 415
Query: 126 IIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGL 185
+D A+ + E+++ + + + K V+ + S +KL++ E+ +LR+YQLEG+
Sbjct: 416 DVDPAK--VKEFESLQ--VLPEIKHVE---RPASDSWQKLEKSREYKNSNQLREYQLEGM 468
Query: 186 NFLVNSWRNDTNVILADEMGLGKTVQSVSMLG--FLQNAQQIPGPFLVVVPLSTLSNWAK 243
N+L+ +W N N ILADEMGLGKT+QS++ L FL+ I GPFL++ PLST++NW +
Sbjct: 469 NWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG---IHGPFLIIAPLSTITNWER 525
Query: 244 EFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKVGRPI----KFNTLLTTYEVVLKDK 298
EFR W MN IVY G++ SR++ QQYE Y D + G P+ KF+ ++TT+E++L D
Sbjct: 526 EFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQ-GNPLSGVFKFHVVITTFEMILADC 583
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
L KI W+ +++DEAHRLKN +L L + ++K+L+TGTPLQNSVEEL++LL+FL
Sbjct: 584 PELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFL 643
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+ +F S+ F++ + +L + E ++ L L+P +LRR+ DVEK+L PK E I+ VE
Sbjct: 644 EPSQFPSETAFLEEFGDLKT--EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 701
Query: 419 MSPLQKQYYKWILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD- 476
++ +QK+YY+ ILE+NF L+KG + N +L+N ++EL+KCCNHP+L A+ D
Sbjct: 702 LTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLISGAEEKILEDF 761
Query: 477 --TSINDTS--KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYK 532
T D +L+ +I ++GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ +
Sbjct: 762 RKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQR 821
Query: 533 GFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWN 592
+ ++R+DG + LR A+D F P S+ F FLL TRAGGLGINL ADT IIFDSDWN
Sbjct: 822 RYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 881
Query: 593 PQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWR 652
PQNDLQA +R HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q +N +GS
Sbjct: 882 PQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTN 941
Query: 653 RKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXX 712
+Q E+ +LR GA D DE SK DID
Sbjct: 942 GVQQLSKMEVEDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILQRRTHTITIQSEGKGS 998
Query: 713 XXXXSAFKVA-NFCGAE-DDGSFWSRWIK-----PEAVAQAEDALA--PRAARNTKSYAE 763
++F + N DD +FW +W K EA ++ E + PR + TK Y
Sbjct: 999 TFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTEAKSEKESLVLDRPRVRKQTKHYNS 1058
Query: 764 ANEPE 768
E E
Sbjct: 1059 FEEDE 1063
Score = 62 (26.9 bits), Expect = 7.3e-142, Sum P(2) = 7.3e-142
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 925 LSYLK-PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIA-PVE--LQ 980
+ Y++ P +W W+ D LL+G+ HG+ + +R D L +K+ P E L
Sbjct: 1266 IDYVEIPVDW-----WDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLS 1320
Query: 981 HHETFLPRAPNLKERAN 997
+ A ++ ER +
Sbjct: 1321 AEQGVTDGASDVPERGH 1337
Score = 50 (22.7 bits), Expect = 1.3e-140, Sum P(2) = 1.3e-140
Identities = 42/189 (22%), Positives = 75/189 (39%)
Query: 819 SKRDATRFYRAVMKFG---NQ-------SQISLIARDAGGAVATAPQEVVVELFDILIDG 868
++R+ FYR V FG +Q +Q +I+R + E + F +
Sbjct: 1450 TRREQADFYRTVSSFGVVYDQEKKTFDWTQFRVISR-----LDKKSDESLEHYFYSFVSM 1504
Query: 869 CREAVEVGSPDPKGPPLLDFFGVSV---KANDLINRVEELQLLAKRI---SRYEDPIKQF 922
CR + + GPP + + +A + R+E L+ + +++ + + ++
Sbjct: 1505 CRSVCRLPAWKDGGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLTCPQLHERLQLC 1564
Query: 923 RVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWEN-IRLDERLGLTKKIAPVELQH 981
R YL P W CG + D LL+G HG + + D +L A
Sbjct: 1565 RPSLYL-PVWWE--CGKHDRD---LLIGTAKHGLNRTDYYVMTDPQLSFLD--AYRNYAQ 1616
Query: 982 HETFLPRAP 990
H+ P+AP
Sbjct: 1617 HKRPDPQAP 1625
Score = 40 (19.1 bits), Expect = 1.5e-139, Sum P(2) = 1.5e-139
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 1274 DPKKFEAWKRRRRAETDMYSQAQPM-LQRP 1302
DP ++ W + +T+ S+ + + L RP
Sbjct: 1018 DPNFWQKWAKIAELDTEAKSEKESLVLDRP 1047
Score = 39 (18.8 bits), Expect = 2.0e-139, Sum P(2) = 2.0e-139
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1075 EGEMSDNEEVYEQFKEVKWMEWC--EDVMADE 1104
+G+ + N+ + + K W+ C E V+ D+
Sbjct: 1184 KGKKTKNQLLLPELKNADWLATCNPEVVLHDD 1215
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 1339 (476.4 bits), Expect = 9.3e-142, Sum P(3) = 9.3e-142
Identities = 308/798 (38%), Positives = 470/798 (58%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W + ++L+ K++ K RF+ +++ ++ +
Sbjct: 667 EFFVKYKNYSYLHCEWATISQLEK---DKRIHQKLK------RFKTKMAQMRHFFHEDEE 717
Query: 75 EMDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
+ D + +V+RI+ + S D +G YLVKW L Y ++TWE E +D +
Sbjct: 718 PFNPDYV----EVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGK 771
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I E+K ++ E K V+ R + A +KL+ E+ +LR+YQLEG+N+L+ +W
Sbjct: 772 IREFKRIQSRHPEL-KRVN--RPQASA-WKKLELSHEYKNRNQLREYQLEGVNWLLFNWY 827
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + N I GPFLV+ PLST++NW +EF W MN
Sbjct: 828 NRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWTE-MN 885
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPI----KFNTLLTTYEVVLKDKAVLSKIKWNYL 309
IVY G+ ASR++ QQYE Y GR I KF+ L+TT+E++L D L +I+W +
Sbjct: 886 TIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCV 945
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L +L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ +F
Sbjct: 946 IIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEF 1005
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
++++ +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 1006 LKDFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRA 1063
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFES-ADHGYGGDTS-----INDT 482
ILE+NF L+KG N +LLN ++EL+KCCNHP+L + A+ + I
Sbjct: 1064 ILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHD 1123
Query: 483 SKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
L+ ++ S+GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1124 FHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGR 1183
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1184 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1243
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNE 661
HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q ++ +G+ +Q E
Sbjct: 1244 CHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKE 1303
Query: 662 LSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKV 721
+ +LR GA E+ +DE SK DID ++F
Sbjct: 1304 IEDLLRKGAYAAIMEE-DDEGSK--FCEEDIDQILLRRTTTITIESEGKGSTFAKASFVA 1360
Query: 722 A-NFCGAE-DDGSFWSRWIKPEAV----AQAEDALA---PRAARNTKSYAEANEPERSNK 772
+ N DD +FW +W K + +++ L PR + T+ ++ + +
Sbjct: 1361 SENRTDISLDDPNFWQKWAKKADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEF 1420
Query: 773 RKKKGSELQEPQERVHKR 790
+ + + P+ R H R
Sbjct: 1421 SDLESEDDERPRSRRHDR 1438
Score = 85 (35.0 bits), Expect = 9.3e-142, Sum P(3) = 9.3e-142
Identities = 58/247 (23%), Positives = 101/247 (40%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E E +R +R +A F + + Q R W+ +R+ T FY
Sbjct: 1760 QRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIA---RREKQQR-WT-----RREQTDFY 1810
Query: 828 RAVMKFGNQSQISLIAR--DAGGAVATAPQ---EVVVELFDILIDGCREAVEVGSPDPKG 882
R V FG + + D A + E + + F + CR+ +
Sbjct: 1811 RVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLPPAAGDE 1870
Query: 883 PPLLDFFGVSV---KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGW 939
PP + F + +A+ + R+E L+ L +++ + P+ + R L+ +P W
Sbjct: 1871 PPDPNLFIEPITEERASRTLYRIELLRRLREQVLCH--PLLEDR-LALCQPPGPELPKWW 1927
Query: 940 NQF-DDARLLLGIHYHGFGNWE-NIRLDERLG-LTKKIAPVELQHHETFLPRAPNLKERA 996
D LL G HG + NI D L ++ +Q+H+ P AP+L +
Sbjct: 1928 EPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMN--YMQNHQAGAP-APSLSRCS 1984
Query: 997 NALLEME 1003
LL +
Sbjct: 1985 TPLLHQQ 1991
Score = 66 (28.3 bits), Expect = 9.4e-140, Sum P(3) = 9.4e-140
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 906 QLLAKRISRYEDPIKQFRVLSYLK-PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRL 964
++L I+ + + F V+ L+ P+ W W+ D LL+G+ HG+ + +R
Sbjct: 1599 KVLGGAIASFSEIDIWFPVVDQLEVPTTW-----WDSEADKSLLIGVFKHGYEKYNTMRA 1653
Query: 965 DERLGLTKK 973
D L +K
Sbjct: 1654 DPALCFLEK 1662
Score = 40 (19.1 bits), Expect = 4.8e-136, Sum P(2) = 4.8e-136
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 771 NKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASA 808
N + S LQ H + S+P VPF+ G +A
Sbjct: 2449 NTFQHSSSGLQSVSSLGHSSATSA-SLPFVPFVMGGAA 2485
Score = 39 (18.8 bits), Expect = 6.5e-137, Sum P(3) = 6.5e-137
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDG 805
++ N++K E+Q +E H E +P + +DG
Sbjct: 2290 KKGNRKKLVELEVQCMEEPNHLDVDLETRIPVINKVDG 2327
Score = 37 (18.1 bits), Expect = 9.3e-142, Sum P(3) = 9.3e-142
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 1285 RRAETDMYSQAQP 1297
RRAE +M+ Q P
Sbjct: 2337 RRAELEMWLQGHP 2349
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 1353 (481.3 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 313/781 (40%), Positives = 463/781 (59%)
Query: 13 EME-FLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELND 71
EME F +K++ S+LHC+W + EL+ K ++K+ RFR ++ ++
Sbjct: 236 EMEEFYVKYRNFSYLHCKWATLEELE------KDPRISQKIK---RFRN----KQAQMKH 282
Query: 72 VSKEMDLDIIKQNS-QVERIIADRISKD-SSGNVTQEYLVKWKGLSYAEATWEKDEIIDF 129
+ E D D+ + +V+RI+ +KD +G YLVKW L Y E+TWE +E +D
Sbjct: 283 IFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDP 342
Query: 130 AQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLV 189
+ I E++A + ++ ++R + S +KL++ E+ +LR+YQLEG+N+L+
Sbjct: 343 VK--IKEFEALQIPP----EIKHMERPASE-SWQKLEKSREYKNSNQLREYQLEGMNWLL 395
Query: 190 NSWRNDTNVILADEMGLGKTVQSVSMLG--FLQNAQQIPGPFLVVVPLSTLSNWAKEFRK 247
+W N N ILADEMGLGKT+QS++ L FL I GPFL++ PLST++NW +EFR
Sbjct: 396 FNWYNRKNCILADEMGLGKTIQSITFLSEIFLMG---IHGPFLIIAPLSTITNWEREFRT 452
Query: 248 WLPTMNVIVYVGTRASREVCQQYEF-YNDKKVGRPI----KFNTLLTTYEVVLKDKAVLS 302
W MN IVY G++ SR++ QQYE Y D + G P+ KF ++TT+E++L D L
Sbjct: 453 WTE-MNAIVYHGSQISRQMIQQYEMVYRDTQ-GNPLPGIFKFQVVITTFEMILADCPELK 510
Query: 303 KIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDK 362
KI+W +++DEAHRLKN +L L + ++K+L+TGTPLQNSVEEL++LL+FL+ +
Sbjct: 511 KIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQ 570
Query: 363 FKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPL 422
F S+ F++ + +L + E ++ L L+P +LRR+ DVEK+L PK E I+ VE++ +
Sbjct: 571 FPSETAFLEEFGDLKT--EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNI 628
Query: 423 QKQYYKWILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD---TS 478
QK+YY+ ILE+NF L+KG + N +L+N ++EL+KCCNHP+L A+ D T
Sbjct: 629 QKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTH 688
Query: 479 INDTS--KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQF 536
+ +L+ +I ++GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + +
Sbjct: 689 SPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTY 748
Query: 537 QRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQND 596
+R+DG + LR A+D F P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQND
Sbjct: 749 ERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQND 808
Query: 597 LQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQ 656
LQA +R HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q +N +G +Q
Sbjct: 809 LQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQ 868
Query: 657 RKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXX 716
E+ +LR GA D DE SK DID
Sbjct: 869 LSKMEVEDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILQRRTQTITIQSEGKGSTFAK 925
Query: 717 SAFKVA-NFCGAE-DDGSFWSRWIK-----PEAVAQAEDALA--PRAARNTKSYAEANEP 767
++F + N DD +FW +W K +A + E + PR + TK Y E
Sbjct: 926 ASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEED 985
Query: 768 E 768
E
Sbjct: 986 E 986
Score = 53 (23.7 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 944 DARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
D LL+G+ HG+ + +R D L +K+
Sbjct: 1203 DKSLLIGVFKHGYERYNAMRADPALCFLEKV 1233
Score = 40 (19.1 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1075 EGEMSDNEEVYEQFKEVKWMEWC--EDVMADE 1104
+G+ + N+ + + K W+ C E V+ D+
Sbjct: 1107 KGKKTKNQMLLPEIKNADWLATCNPEVVLHDD 1138
Score = 39 (18.8 bits), Expect = 3.9e-140, Sum P(2) = 3.9e-140
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 1274 DPKKFEAWKRRRRAETDMYSQAQPM-LQRP 1302
DP ++ W + +TD ++ + + + RP
Sbjct: 941 DPNFWQKWAKIAELDTDAKNEKESLVIDRP 970
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 1368 (486.6 bits), Expect = 1.5e-141, Sum P(2) = 1.5e-141
Identities = 315/785 (40%), Positives = 468/785 (59%)
Query: 8 EPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEI 67
EP ++ F +K++ S+LHC+W + EL+ K A+K+ RFR ++
Sbjct: 310 EPPFDLELFYVKYRNFSYLHCKWATMEELE------KDPRIAQKIK---RFRN----KQA 356
Query: 68 ELNDVSKEMDLDIIKQNS-QVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDE 125
++ + E D D+ + +V+R++ +KD+ +G YLVKW L Y E+TWE +E
Sbjct: 357 QMKHIFTEPDEDLFNPDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEE 416
Query: 126 IIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGL 185
+D A+ + E+++ + + + K V+ + S +KL++ E+ +LR+YQLEG+
Sbjct: 417 DVDPAK--VKEFESLQ--VLPEIKHVE---RPASDSWQKLEKSREYKNSNQLREYQLEGM 469
Query: 186 NFLVNSWRNDTNVILADEMGLGKTVQSVSMLG--FLQNAQQIPGPFLVVVPLSTLSNWAK 243
N+L+ +W N N ILADEMGLGKT+QS++ L FL+ I GPFL++ PLST++NW +
Sbjct: 470 NWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG---IHGPFLIIAPLSTITNWER 526
Query: 244 EFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKVGRPI----KFNTLLTTYEVVLKDK 298
EFR W MN IVY G++ SR++ QQYE Y D + G P+ KF+ ++TT+E++L D
Sbjct: 527 EFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQ-GNPLSGVFKFHVVITTFEMILADC 584
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
L KI W+ +++DEAHRLKN +L L + ++K+L+TGTPLQNSVEEL++LL+FL
Sbjct: 585 PELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFL 644
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+ +F S+ F++ + +L + E ++ L L+P +LRR+ DVEK+L PK E I+ VE
Sbjct: 645 EPSQFPSETAFLEEFGDLKT--EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 702
Query: 419 MSPLQKQYYKWILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD- 476
++ +QK+YY+ ILE+NF L KG + N +L+N ++EL+KCCNHP+L A+ D
Sbjct: 703 LTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDF 762
Query: 477 --TSINDTS--KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYK 532
T D +L+ +I ++GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ +
Sbjct: 763 RKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQR 822
Query: 533 GFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWN 592
+ ++R+DG + LR A+D F P S+ F FLL TRAGGLGINL ADT IIFDSDWN
Sbjct: 823 RYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 882
Query: 593 PQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWR 652
PQNDLQA +R HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q +N +GS
Sbjct: 883 PQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTN 942
Query: 653 RKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXX 712
+Q E+ +LR GA D DE SK DID
Sbjct: 943 GVQQLSKMEVEDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILQRRTHTITIQSEGKGS 999
Query: 713 XXXXSAFKVA-NFCGAE-DDGSFWSRWIK-----PEAVAQAEDALA--PRAARNTKSYAE 763
++F + N DD +FW +W K EA + E + PR + TK Y
Sbjct: 1000 TFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNS 1059
Query: 764 ANEPE 768
E E
Sbjct: 1060 FEEDE 1064
Score = 64 (27.6 bits), Expect = 1.5e-141, Sum P(2) = 1.5e-141
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 925 LSYLK-PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIA-PVE--LQ 980
+ Y++ P +W W+ D LL+G+ HG+ + +R D L +K+ P E L
Sbjct: 1267 IDYVEIPVDW-----WDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLS 1321
Query: 981 HHETFLPRAPNLKERAN 997
+ ++ ER N
Sbjct: 1322 AEQGVTDGTSDIPERGN 1338
Score = 56 (24.8 bits), Expect = 1.1e-140, Sum P(2) = 1.1e-140
Identities = 47/204 (23%), Positives = 84/204 (41%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+R N+++ E+ P + + ++ F S + AQ R W+ +R+ FY
Sbjct: 1406 QRCNRKELCRPEILGPGNQGYWVQEEMFRRTSEMDLINKEAQKR-WT-----RREQADFY 1459
Query: 828 RAVMKFG---NQ-------SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
RAV FG +Q +Q +I+R + E + F + CR + +
Sbjct: 1460 RAVSSFGVVYDQEKKTFDWTQFRIISR-----LDKKSDESLEHYFYSFVAMCRNVCRLPT 1514
Query: 878 PDPKGPPLLDFFGVSV---KANDLINRVEELQLLAKRISR---YEDPIKQFRVLSYLKPS 931
GPP + + +A + R+E L+ + +++ R + ++ R YL P
Sbjct: 1515 WKDGGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLRCPQLHERLQLCRPSLYL-PV 1573
Query: 932 NWSKGCGWNQFDDARLLLGIHYHG 955
W CG + D LL+G HG
Sbjct: 1574 WWE--CGKHDRD---LLVGTAKHG 1592
Score = 42 (19.8 bits), Expect = 3.2e-139, Sum P(2) = 3.2e-139
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 727 AEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPE 768
+++ GSF P + +DALA A+ K +E E
Sbjct: 1719 SQEPGSFQE---SPSTIEPRKDALASSASEEGKCQPGGHEAE 1757
Score = 39 (18.8 bits), Expect = 6.6e-139, Sum P(2) = 6.6e-139
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1075 EGEMSDNEEVYEQFKEVKWMEWC--EDVMADE 1104
+G+ + N+ + + K W+ C E V+ D+
Sbjct: 1185 KGKKTKNQLLLPELKNADWLATCNPEVVLHDD 1216
Score = 38 (18.4 bits), Expect = 8.5e-139, Sum P(2) = 8.5e-139
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 740 PEAVAQAEDALAPRAA----RNTKSYAEANEP----ERSNKRKKKGSELQEPQERVHKRR 791
P A +QAE A+ ++ R Y+ P S+K K++ +EP +
Sbjct: 2343 PAASSQAEKAIPSKSLLDWLRQQADYS-LEVPGFGANFSDKPKQRRPRCKEPGKLDVNSL 2401
Query: 792 KAEFSVPSVP 801
E VP+VP
Sbjct: 2402 SGEERVPAVP 2411
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 1368 (486.6 bits), Expect = 1.5e-141, Sum P(2) = 1.5e-141
Identities = 315/785 (40%), Positives = 468/785 (59%)
Query: 8 EPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEI 67
EP ++ F +K++ S+LHC+W + EL+ K A+K+ RFR ++
Sbjct: 310 EPPFDLELFYVKYRNFSYLHCKWATMEELE------KDPRIAQKIK---RFRN----KQA 356
Query: 68 ELNDVSKEMDLDIIKQNS-QVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDE 125
++ + E D D+ + +V+R++ +KD+ +G YLVKW L Y E+TWE +E
Sbjct: 357 QMKHIFTEPDEDLFNPDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEE 416
Query: 126 IIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGL 185
+D A+ + E+++ + + + K V+ + S +KL++ E+ +LR+YQLEG+
Sbjct: 417 DVDPAK--VKEFESLQ--VLPEIKHVE---RPASDSWQKLEKSREYKNSNQLREYQLEGM 469
Query: 186 NFLVNSWRNDTNVILADEMGLGKTVQSVSMLG--FLQNAQQIPGPFLVVVPLSTLSNWAK 243
N+L+ +W N N ILADEMGLGKT+QS++ L FL+ I GPFL++ PLST++NW +
Sbjct: 470 NWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG---IHGPFLIIAPLSTITNWER 526
Query: 244 EFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKVGRPI----KFNTLLTTYEVVLKDK 298
EFR W MN IVY G++ SR++ QQYE Y D + G P+ KF+ ++TT+E++L D
Sbjct: 527 EFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQ-GNPLSGVFKFHVVITTFEMILADC 584
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
L KI W+ +++DEAHRLKN +L L + ++K+L+TGTPLQNSVEEL++LL+FL
Sbjct: 585 PELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFL 644
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+ +F S+ F++ + +L + E ++ L L+P +LRR+ DVEK+L PK E I+ VE
Sbjct: 645 EPSQFPSETAFLEEFGDLKT--EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 702
Query: 419 MSPLQKQYYKWILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD- 476
++ +QK+YY+ ILE+NF L KG + N +L+N ++EL+KCCNHP+L A+ D
Sbjct: 703 LTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDF 762
Query: 477 --TSINDTS--KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYK 532
T D +L+ +I ++GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ +
Sbjct: 763 RKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQR 822
Query: 533 GFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWN 592
+ ++R+DG + LR A+D F P S+ F FLL TRAGGLGINL ADT IIFDSDWN
Sbjct: 823 RYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 882
Query: 593 PQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWR 652
PQNDLQA +R HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q +N +GS
Sbjct: 883 PQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTN 942
Query: 653 RKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXX 712
+Q E+ +LR GA D DE SK DID
Sbjct: 943 GVQQLSKMEVEDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILQRRTHTITIQSEGKGS 999
Query: 713 XXXXSAFKVA-NFCGAE-DDGSFWSRWIK-----PEAVAQAEDALA--PRAARNTKSYAE 763
++F + N DD +FW +W K EA + E + PR + TK Y
Sbjct: 1000 TFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNS 1059
Query: 764 ANEPE 768
E E
Sbjct: 1060 FEEDE 1064
Score = 64 (27.6 bits), Expect = 1.5e-141, Sum P(2) = 1.5e-141
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 925 LSYLK-PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIA-PVE--LQ 980
+ Y++ P +W W+ D LL+G+ HG+ + +R D L +K+ P E L
Sbjct: 1267 IDYVEIPVDW-----WDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLS 1321
Query: 981 HHETFLPRAPNLKERAN 997
+ ++ ER N
Sbjct: 1322 AEQGVTDGTSDIPERGN 1338
Score = 56 (24.8 bits), Expect = 1.1e-140, Sum P(2) = 1.1e-140
Identities = 47/204 (23%), Positives = 84/204 (41%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+R N+++ E+ P + + ++ F S + AQ R W+ +R+ FY
Sbjct: 1406 QRCNRKELCRPEILGPGNQGYWVQEEMFRRTSEMDLINKEAQKR-WT-----RREQADFY 1459
Query: 828 RAVMKFG---NQ-------SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
RAV FG +Q +Q +I+R + E + F + CR + +
Sbjct: 1460 RAVSSFGVVYDQEKKTFDWTQFRIISR-----LDKKSDESLEHYFYSFVAMCRNVCRLPT 1514
Query: 878 PDPKGPPLLDFFGVSV---KANDLINRVEELQLLAKRISR---YEDPIKQFRVLSYLKPS 931
GPP + + +A + R+E L+ + +++ R + ++ R YL P
Sbjct: 1515 WKDGGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLRCPQLHERLQLCRPSLYL-PV 1573
Query: 932 NWSKGCGWNQFDDARLLLGIHYHG 955
W CG + D LL+G HG
Sbjct: 1574 WWE--CGKHDRD---LLVGTAKHG 1592
Score = 42 (19.8 bits), Expect = 3.2e-139, Sum P(2) = 3.2e-139
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 727 AEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPE 768
+++ GSF P + +DALA A+ K +E E
Sbjct: 1719 SQEPGSFQE---SPSTIEPRKDALASSASEEGKCQPGGHEAE 1757
Score = 39 (18.8 bits), Expect = 6.6e-139, Sum P(2) = 6.6e-139
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1075 EGEMSDNEEVYEQFKEVKWMEWC--EDVMADE 1104
+G+ + N+ + + K W+ C E V+ D+
Sbjct: 1185 KGKKTKNQLLLPELKNADWLATCNPEVVLHDD 1216
Score = 38 (18.4 bits), Expect = 8.5e-139, Sum P(2) = 8.5e-139
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 740 PEAVAQAEDALAPRAA----RNTKSYAEANEP----ERSNKRKKKGSELQEPQERVHKRR 791
P A +QAE A+ ++ R Y+ P S+K K++ +EP +
Sbjct: 2343 PAASSQAEKAIPSKSLLDWLRQQADYS-LEVPGFGANFSDKPKQRRPRCKEPGKLDVNSL 2401
Query: 792 KAEFSVPSVP 801
E VP+VP
Sbjct: 2402 SGEERVPAVP 2411
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 1357 (482.7 bits), Expect = 2.0e-141, Sum P(3) = 2.0e-141
Identities = 324/839 (38%), Positives = 479/839 (57%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHCQW S EL K++ K RF+ + + L+++
Sbjct: 826 EFYVKYKNFSYLHCQWASVEELDK---DKRIQQKIK------RFKAKQGQNKF-LSEIDD 875
Query: 75 EM-DLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
E+ + D + +++RI+ S D +G YLVKW L Y ++TWE + ID A+
Sbjct: 876 ELFNPDYV----EIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAK-- 929
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I+E+ E M+ + +M ++R +K + E+ KLR+YQLEG+N+L+ +W
Sbjct: 930 IEEF---EKLMSREPEMERVERPPAD-DWKKSESSREYKNNNKLREYQLEGVNWLLFNWY 985
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + + I GPFLV+ PLST+ NW +EFR W +N
Sbjct: 986 NTRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LN 1043
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNYL 309
V+VY G++ASR Q YE Y GR IK F+ ++TT+E++L D L I W +
Sbjct: 1044 VVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCV 1103
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ F
Sbjct: 1104 VIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTF 1163
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
+Q + +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 1164 MQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRA 1221
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGY---GGDTSINDTS-- 483
ILE+NF L+KG + N +LLN ++EL+KCCNHP+L A+ +T D+
Sbjct: 1222 ILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDF 1281
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
+L+ +I ++GKLV++DKLL +L HRVLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1282 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 1341
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 603
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1342 RGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1401
Query: 604 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNEL 662
HRIGQ + V IYR +T S E ++ ++A K+ LD V+Q ++ E + +Q E+
Sbjct: 1402 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEI 1461
Query: 663 SAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA 722
+LR GA D DE SK DID ++F +
Sbjct: 1462 EDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILLRRTHTITIESEGKGSTFAKASFVAS 1518
Query: 723 -NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSYAEANEPE----- 768
N DD +FW +W K +A+ + + PR + T+ Y+ E E
Sbjct: 1519 GNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKEDELMEFS 1578
Query: 769 --RSNKRKKKGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNLSKRDAT 824
S+ +K ++ + PQ++ ++E F V + G S+G KR T
Sbjct: 1579 DLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGRY-KRQLT 1636
Score = 65 (27.9 bits), Expect = 2.0e-141, Sum P(3) = 2.0e-141
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
P++W W++ D LL+G+ HG+ + ++R D L +++
Sbjct: 1783 PADW-----WDKEADKSLLIGVFKHGYEKYNSMRADSTLCFLERV 1822
Score = 61 (26.5 bits), Expect = 5.3e-141, Sum P(3) = 5.3e-141
Identities = 41/198 (20%), Positives = 78/198 (39%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E +R +R + E + + + W+ +R+ FY
Sbjct: 1921 QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWT-----RREEADFY 1975
Query: 828 RAVMKFGN-----QSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVG-SPDPK 881
R V FG + Q A + E + + F+ ++ CR + PD +
Sbjct: 1976 RVVSTFGIIFDPIKHQFDWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDE 2035
Query: 882 GPPLLDFFG--VSVKANDLINRVEELQLLAKRISRYEDPIKQFRVL--SYLKPSNWSKGC 937
P L +A+ + R+E L+ + +++ + ++ ++ S P W C
Sbjct: 2036 PPDLSTMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWE--C 2093
Query: 938 GWNQFDDARLLLGIHYHG 955
G + D LL+G HG
Sbjct: 2094 GKHDKD---LLIGAAKHG 2108
Score = 41 (19.5 bits), Expect = 2.0e-141, Sum P(3) = 2.0e-141
Identities = 15/69 (21%), Positives = 34/69 (49%)
Query: 1055 QTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQRL 1114
++T+ K + E P KE+ ++ + ++ + K+ K + C D A+ L+ +
Sbjct: 2169 KSTEQTESKVEGSENPAAKEKSDIKEETDIAD--KDTK--QDC-DAEAETGSVKCELKDI 2223
Query: 1115 QATSDNLPK 1123
+ ++D PK
Sbjct: 2224 EMSTDVDPK 2232
Score = 40 (19.1 bits), Expect = 2.6e-141, Sum P(3) = 2.6e-141
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 1239 DNDLNFSTFNRHAERQKGHKNVSTYQMTEPIHKG 1272
D +L+F +++ + +G N +T P+ G
Sbjct: 2119 DPELSFLEAHKNFAQNRGTGNANTVSSLHPVGAG 2152
Score = 38 (18.4 bits), Expect = 2.3e-137, Sum P(2) = 2.3e-137
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 774 KKKGSELQEPQERVHKRRKAE 794
K+ L P++R +RRK E
Sbjct: 2390 KEDALNLSVPRQRRRRRRKIE 2410
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 1365 (485.6 bits), Expect = 2.5e-141, Sum P(2) = 2.5e-141
Identities = 315/785 (40%), Positives = 467/785 (59%)
Query: 8 EPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEI 67
EP ++ F +K++ S+LHC+W + EL+ K A+K+ RFR ++
Sbjct: 310 EPPFDLELFYVKYRNFSYLHCKWATMEELE------KDPRIAQKIK---RFRN----KQA 356
Query: 68 ELNDVSKEMDLDIIKQNS-QVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDE 125
++ + E D D+ + +V+RI+ +KD+ +G YLVKW L Y E+TWE +E
Sbjct: 357 QMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEE 416
Query: 126 IIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGL 185
+D A+ + E+++ + + + K V+ + S +KL++ E+ +LR+YQLEG+
Sbjct: 417 DVDPAK--VKEFESLQ--VLPEIKHVE---RPASDSWQKLEKSREYKNSNQLREYQLEGM 469
Query: 186 NFLVNSWRNDTNVILADEMGLGKTVQSVSMLG--FLQNAQQIPGPFLVVVPLSTLSNWAK 243
N+L+ +W N N ILADEMGLGKT+QS++ L FL+ I GPFL++ PLST++NW +
Sbjct: 470 NWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG---IHGPFLIIAPLSTITNWER 526
Query: 244 EFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKVGRPI----KFNTLLTTYEVVLKDK 298
EFR W MN IVY G++ SR++ QQYE Y D + G P+ KF+ ++TT+E++L D
Sbjct: 527 EFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQ-GNPLSGVFKFHVVITTFEMILADC 584
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
L KI W+ +++DEAHRLKN +L L + ++K+L+TGTPLQNSVEEL++LL+FL
Sbjct: 585 PELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFL 644
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
+ +F S+ F++ + +L + E ++ L L+P +LRR+ DVEK+L PK E I+ VE
Sbjct: 645 EPSQFPSETAFLEEFGDLKT--EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 702
Query: 419 MSPLQKQYYKWILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD- 476
++ +QK+YY+ ILE+NF L KG + N +L+N ++EL+KCCNHP+L A+ D
Sbjct: 703 LTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDF 762
Query: 477 --TSINDTS--KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYK 532
T D +L+ +I ++GKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ +
Sbjct: 763 RKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQR 822
Query: 533 GFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWN 592
+ ++R+DG + LR A+D F P S+ F FLL TRAGGLGINL ADT IIFDSDWN
Sbjct: 823 RYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 882
Query: 593 PQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWR 652
PQNDLQA +R HRIGQ + V +YR +T S E ++ ++A K+ LD V+Q +N +G
Sbjct: 883 PQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTN 942
Query: 653 RKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXX 712
+Q E+ +LR GA D DE SK DID
Sbjct: 943 GVQQLSKMEVEDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILQRRTHTITIQSEGKGS 999
Query: 713 XXXXSAFKVA-NFCGAE-DDGSFWSRWIK-----PEAVAQAEDALA--PRAARNTKSYAE 763
++F + N DD +FW +W K EA + E + PR + TK Y
Sbjct: 1000 TFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNS 1059
Query: 764 ANEPE 768
E E
Sbjct: 1060 FEEDE 1064
Score = 65 (27.9 bits), Expect = 2.5e-141, Sum P(2) = 2.5e-141
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 925 LSYLK-PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIA-PVE--LQ 980
+ Y++ P +W W+ D LL+G+ HG+ + +R D L +K+ P E L
Sbjct: 1267 IDYMEIPVDW-----WDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLS 1321
Query: 981 HHETFLPRAPNLKERAN 997
+ ++ ER N
Sbjct: 1322 AEQGVTDGTSDIPERGN 1338
Score = 53 (23.7 bits), Expect = 4.6e-140, Sum P(2) = 4.6e-140
Identities = 45/204 (22%), Positives = 84/204 (41%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+R N+++ E+ P + + ++ F S + AQ R W+ +R+ FY
Sbjct: 1406 QRCNRKELCRPEILGPGNQGYWVQEEMFRRTSEMDLINKEAQKR-WT-----RREQADFY 1459
Query: 828 RAVMKFG---NQ-------SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS 877
R V FG +Q +Q +I+R + E + + F + CR + +
Sbjct: 1460 RTVSSFGVVYDQEKKTFDWTQFRIISR-----LDKKSDESLEQYFYSFVAMCRNVCRLPT 1514
Query: 878 PDPKGPPLLDFFGVSV---KANDLINRVEELQLLAKRISR---YEDPIKQFRVLSYLKPS 931
GPP + + +A + R+E L+ + +++ + + ++ R YL P
Sbjct: 1515 WKDGGPPDTTIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHERLQLCRPSLYL-PV 1573
Query: 932 NWSKGCGWNQFDDARLLLGIHYHG 955
W CG + D LL+G HG
Sbjct: 1574 WWE--CGKHDRD---LLIGTAKHG 1592
Score = 41 (19.5 bits), Expect = 8.5e-139, Sum P(2) = 8.5e-139
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 1075 EGEMSDNEEVYEQFKEVKWMEWC--EDVMADE 1104
+G+ + N+ + + K+ W+ C E V+ D+
Sbjct: 1185 KGKKTKNQLLIPELKDADWLATCNPEVVLHDD 1216
Score = 37 (18.1 bits), Expect = 2.3e-138, Sum P(2) = 2.3e-138
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 777 GSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWS 814
G P+ +AE S+PS +D Q D+S
Sbjct: 2333 GPATSAPEPATAASSQAEKSIPSKSLLDWLRQQA-DYS 2369
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 1338 (476.1 bits), Expect = 2.7e-141, Sum P(2) = 2.7e-141
Identities = 311/780 (39%), Positives = 455/780 (58%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHCQW S EL K++ K RF+ + + L+++
Sbjct: 11 EFYVKYKNFSYLHCQWASVEELDK---DKRIQQKIK------RFKAKQGQNKF-LSEIDD 60
Query: 75 EM-DLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
E+ + D + +++RI+ S D +G YLVKW L Y ++TWE + ID A+
Sbjct: 61 ELFNPDYV----EIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAK-- 114
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I+E+ E M+ + +M ++R +K + E+ KLR+YQLEG+N+L+ +W
Sbjct: 115 IEEF---EKLMSREPEMERVERPPAD-DWKKSESSREYKNNNKLREYQLEGVNWLLFNWY 170
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + + I GPFLV+ PLST+ NW +EFR W +N
Sbjct: 171 NTRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LN 228
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNYL 309
V+VY G++ASR Q YE Y GR IK F+ ++TT+E++L D L I W +
Sbjct: 229 VVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCV 288
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ F
Sbjct: 289 VIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTF 348
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
+Q + +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 349 MQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRA 406
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGY---GGDTSINDTS-- 483
ILE+NF L+KG + N +LLN ++EL+KCCNHP+L A+ +T D+
Sbjct: 407 ILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDF 466
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
+L+ +I ++GKLV++DKLL +L HRVLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 467 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 526
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 603
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 527 RGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 586
Query: 604 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNEL 662
HRIGQ + V IYR +T S E ++ ++A K+ LD V+Q ++ E + +Q E+
Sbjct: 587 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEI 646
Query: 663 SAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA 722
+LR GA D DE SK DID +A
Sbjct: 647 EDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILLRRTHTITIESEGKGSTFAKVC--IA 701
Query: 723 NFCGAE-------DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSYAEANEPE 768
+F + DD +FW +W K +A+ + + PR + T+ Y+ E E
Sbjct: 702 SFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKEDE 761
Score = 65 (27.9 bits), Expect = 2.7e-141, Sum P(2) = 2.7e-141
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
P++W W++ D LL+G+ HG+ + ++R D L +++
Sbjct: 971 PADW-----WDKEADKSLLIGVFKHGYEKYNSMRADSTLCFLERV 1010
Score = 61 (26.5 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 41/198 (20%), Positives = 78/198 (39%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E +R +R + E + + + W+ +R+ FY
Sbjct: 1109 QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWT-----RREEADFY 1163
Query: 828 RAVMKFGN-----QSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVG-SPDPK 881
R V FG + Q A + E + + F+ ++ CR + PD +
Sbjct: 1164 RVVSTFGIIFDPIKHQFDWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDE 1223
Query: 882 GPPLLDFFG--VSVKANDLINRVEELQLLAKRISRYEDPIKQFRVL--SYLKPSNWSKGC 937
P L +A+ + R+E L+ + +++ + ++ ++ S P W C
Sbjct: 1224 PPDLSTMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWE--C 1281
Query: 938 GWNQFDDARLLLGIHYHG 955
G + D LL+G HG
Sbjct: 1282 GKHDKD---LLIGAAKHG 1296
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 1348 (479.6 bits), Expect = 6.2e-141, Sum P(2) = 6.2e-141
Identities = 300/740 (40%), Positives = 444/740 (60%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
E+ +K+K S+LHC+W A ++ L K++ K RF+ +++ + L + +
Sbjct: 611 EYFVKYKNYSYLHCEW---ATIEQLERDKRIHQKLK------RFKTKMTQMQHFLQEDEE 661
Query: 75 EMDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
+ D + +V+RI+ + S D +G YLVKW L Y ++TWE E +D +
Sbjct: 662 SFNPDYV----EVDRILDESHSTDKDNGEPVVYYLVKWCSLPYEDSTWELKEDVDDGK-- 715
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I+E+K EA ++ + S +KL+ E+ G +LR+YQLEG+N+L+ +W
Sbjct: 716 IEEFKRIEARQPNLKRVA----RPAATSWKKLELSREYQNGNQLREYQLEGVNWLLFNWY 771
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + N I GPFLV+ PLST++NW +EF W MN
Sbjct: 772 NRQNCILADEMGLGKTIQSITFLQEVYNVG-IRGPFLVIAPLSTITNWEREFGSWTQ-MN 829
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPI----KFNTLLTTYEVVLKDKAVLSKIKWNYL 309
IVY G+ ASR++ QQYE Y GR I KF+ L+TT+E+VL D L +I+W +
Sbjct: 830 TIVYHGSLASRQMIQQYEMYCKDSKGRLIPGAYKFDALITTFEMVLSDCPELREIEWRCV 889
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L +L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ +F
Sbjct: 890 IIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTQFSSEAEF 949
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
++++ +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 950 LKDFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRA 1007
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD----TSINDTS- 483
ILE+NF L KG + N +LLN ++EL+KCCNHP+L A+ + T +
Sbjct: 1008 ILEKNFSFLTKGASQSNTPNLLNTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDF 1067
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
++ ++ SSGKLV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1068 HVQAMVRSSGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 1127
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 603
+ +R A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1128 RGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1187
Query: 604 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRK--KQRKGNE 661
HRIGQ + V IYR +T S E ++ ++A K+ LD V+Q ++ + +Q E
Sbjct: 1188 HRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNHLSGPIQQFTKKE 1247
Query: 662 LSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKV 721
+ +LR GA D +DE SK DID ++F
Sbjct: 1248 IEDLLRKGAYAAIM-DEDDEGSK--FCEEDIDQILLRRTTTITIESEGKGSTFSKASFVA 1304
Query: 722 A-NFCGAE-DDGSFWSRWIK 739
+ N DD +FW +W K
Sbjct: 1305 SENRTDISLDDPNFWQKWAK 1324
Score = 71 (30.1 bits), Expect = 6.2e-141, Sum P(2) = 6.2e-141
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIA-PVE----LQHHET 984
PS W W++ D LL+G+ HG+ + +R D L +K+ P E +HH
Sbjct: 1565 PSRW-----WDREADKSLLIGVFKHGYEKYNTMRADPALCFLEKVGGPDEQAIAAEHHAQ 1619
Query: 985 FLPRAPN 991
P+
Sbjct: 1620 DFSELPD 1626
Score = 56 (24.8 bits), Expect = 2.4e-139, Sum P(2) = 2.4e-139
Identities = 25/95 (26%), Positives = 41/95 (43%)
Query: 741 EAVAQAEDAL-APRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPS 799
EA A L P +A + +RS KR++ E +E ++ KR +A F +
Sbjct: 1668 EATAMPSGMLWPPGSALTARLRRLITAYQRSYKREQLKLEAEERGDKRRKRCEAAFKLKE 1727
Query: 800 VPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFG 834
+ Q R W+ +R+A F+R + FG
Sbjct: 1728 IA---RREKQQR-WT-----RREACDFFRVLSSFG 1753
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 1351 (480.6 bits), Expect = 8.4e-141, Sum P(3) = 8.4e-141
Identities = 326/848 (38%), Positives = 482/848 (56%)
Query: 6 DSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSRE 65
DS + EF +K+K S+LHCQW A +++L K++ K RF+ +
Sbjct: 815 DSGEEVEVEEFYVKYKNFSYLHCQW---ASVEDLEKDKRIQQKIK------RFKAKQGQN 865
Query: 66 EIELNDVSKEM-DLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKD 124
+ L+++ E+ + D + +V+RI+ S D G YLVKW L Y ++TWE
Sbjct: 866 KF-LSEIEDELFNPDYV----EVDRIMDFARSTDERGEPVTHYLVKWCSLPYEDSTWELR 920
Query: 125 EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
+ ID A+ I+E+ E M+ + + ++R +K + E+ KLR+YQLEG
Sbjct: 921 QDIDQAK--IEEF---EKLMSREPETERVERPPAD-DWKKSESSREYKNNNKLREYQLEG 974
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
+N+L+ +W N N ILADEMGLGKT+QS++ L + + I GPFLV+ PLST+ NW +E
Sbjct: 975 VNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWERE 1033
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAV 300
FR W +NV+VY G++ASR Q YE Y GR IK F+ ++TT+E++L D
Sbjct: 1034 FRTWTE-LNVVVYHGSQASRRTIQSYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPE 1092
Query: 301 LSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDH 360
L I W +++DEAHRLKN +L L ++K+L+TGTPLQN+VEEL++LLHFL+
Sbjct: 1093 LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEP 1152
Query: 361 DKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMS 420
+F S+ F+Q + +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++
Sbjct: 1153 SRFPSETTFMQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELT 1210
Query: 421 PLQKQYYKWILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGY---GGD 476
+QK+YY+ ILE+NF L+KG + N +LLN ++EL+KCCNHP+L A+ +
Sbjct: 1211 NIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKE 1270
Query: 477 TSINDTS--KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGF 534
T D+ +L+ +I ++GKLV++DKLL +L HRVLIFSQMVR LDIL +Y+ + +
Sbjct: 1271 THNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRY 1330
Query: 535 QFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQ 594
++R+DG + LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQ
Sbjct: 1331 PYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 1390
Query: 595 NDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRR 653
NDLQA +R HRIGQ + V IYR +T S E ++ ++A K+ LD V+Q ++ E +
Sbjct: 1391 NDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNG 1450
Query: 654 KKQRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXX 713
+Q E+ +LR GA D DE SK DID
Sbjct: 1451 VQQLSKKEIEDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILLRRTHTITIESEGKGST 1507
Query: 714 XXXSAFKVA-NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSYAEA 764
++F + N DD +FW +W K +A+ + + PR + T+ Y+
Sbjct: 1508 FAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAV 1567
Query: 765 NEPE-------RSNKRKKKGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYG 816
E E S+ +K ++ + PQ+R ++E F V + G S+G
Sbjct: 1568 KEDELMEFSDLESDSEEKPCTKPRRPQDRSQGYARSECFRVEKNLLVYGWGRWTDILSHG 1627
Query: 817 NLSKRDAT 824
KR T
Sbjct: 1628 RY-KRQLT 1634
Score = 66 (28.3 bits), Expect = 8.4e-141, Sum P(3) = 8.4e-141
Identities = 42/198 (21%), Positives = 77/198 (38%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E +R +R + E S + + W+ +R+ FY
Sbjct: 1920 QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWT-----RREEADFY 1974
Query: 828 RAVMKFG-----NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS-PDPK 881
R V FG + Q A + E + + F + CR + + PD +
Sbjct: 1975 RVVSTFGVIFDPMKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPTKPDDE 2034
Query: 882 GPPLLDFFG--VSVKANDLINRVEELQLLAKRISRYEDPIKQFRVL--SYLKPSNWSKGC 937
P L +A+ + R+E L+ + +++ + ++ ++ S P W C
Sbjct: 2035 PPDLSSMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWE--C 2092
Query: 938 GWNQFDDARLLLGIHYHG 955
G + D LL+G HG
Sbjct: 2093 GRHDRD---LLVGAAKHG 2107
Score = 64 (27.6 bits), Expect = 1.4e-140, Sum P(3) = 1.4e-140
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
P++W W++ D LL+G+ HG+ + ++R D L +++
Sbjct: 1781 PTDW-----WDKEADKSLLIGVFKHGYEKYNSMRADPALCFLERV 1820
Score = 42 (19.8 bits), Expect = 3.6e-137, Sum P(2) = 3.6e-137
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQ 809
L+ A T + + + + ++K ++KG+E +E + + +E S +V D A+
Sbjct: 2817 LSAAAGNATTASGQGDPDDGTSKGEEKGNENEE------ENKDSEKSTDAVSATDSANGS 2870
Query: 810 V 810
V
Sbjct: 2871 V 2871
Score = 40 (19.1 bits), Expect = 8.4e-141, Sum P(3) = 8.4e-141
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 1220 QEEAGIGPSHINGSASGSI 1238
QEE G S G SGS+
Sbjct: 2162 QEEKATGQSEGKGEESGSV 2180
Score = 38 (18.4 bits), Expect = 9.6e-137, Sum P(2) = 9.6e-137
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 774 KKKGSELQEPQERVHKRRKAE 794
K+ L P++R +RRK E
Sbjct: 2386 KEDALNLSVPRQRRRRRRKIE 2406
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 1312 (466.9 bits), Expect = 3.1e-140, Sum P(3) = 3.1e-140
Identities = 270/528 (51%), Positives = 363/528 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D+QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ++ L L
Sbjct: 68 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 127
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GP+LV PLST+ NW +EF W P V+ Y G + SR V ++ EF + D
Sbjct: 128 EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 187
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KKV R IKF+ LLT+YE++ D+A+L I+W L+VDEAHRLKN++++ + L+
Sbjct: 188 GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 247
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 248 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 305
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+S +QK+YYK+IL RNF LN GNQVSL
Sbjct: 306 LLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSL 365
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A N + ++ SSGKL++L K+L +L +
Sbjct: 366 LNIMMDLKKCCNHPYLFPVA--AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEG 423
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 424 HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST 483
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I +
Sbjct: 484 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ 543
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED 677
AK+KM+L HLV++ S KQ EL IL+FG EELFK+D
Sbjct: 544 VAKRKMMLTHLVVRPGLGSKSGSMTKQ----ELDDILKFGTEELFKDD 587
Score = 55 (24.4 bits), Expect = 3.1e-140, Sum P(3) = 3.1e-140
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 116 YAEATWEKDEI-IDFAQDAIDEYKA-REAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
Y + TWE D+I I + + Y RE + E ++ KKGK E+P
Sbjct: 2 YDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKP 57
Score = 41 (19.5 bits), Expect = 3.1e-140, Sum P(3) = 3.1e-140
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 717 SAFKVANFCGAEDDG 731
S+FKVA + E+DG
Sbjct: 669 SSFKVAQYVVREEDG 683
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 1303 (463.7 bits), Expect = 3.2e-140, Sum P(3) = 3.2e-140
Identities = 269/537 (50%), Positives = 368/537 (68%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D QP++L GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 721 KFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 780
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GPFLV PLST+ NW +EF W P M V+ YVG + SR V ++ EF + D
Sbjct: 781 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFTFEDNAIRG 840
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KK + +KF+ LLT+YE++ D+A+L I W L+VDEAHRLKN++++ + L+
Sbjct: 841 GKKASKMKKEAAVKFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVLN 900
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + +++ E+++ LH
Sbjct: 901 NYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAK--EDQIKKLHD 958
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K +P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 959 MLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKYILTRNFEALNTRGGGNQVSL 1018
Query: 450 LNIVVELKKCCNHPFLFESA-DHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LN+V++LKKCCNHP+LF +A + D S L + +SGKL++L K+L +L E
Sbjct: 1019 LNVVMDLKKCCNHPYLFPTAATEAPKMPNGMYDGSALTK---ASGKLMLLFKMLKKLKEG 1075
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ +G++++R+DG +R +A+D FNAPG+ F FLLS
Sbjct: 1076 GHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLLS 1135
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ + V IYRFVT SVEE I
Sbjct: 1136 TRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERIT 1195
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
+ AKKKM+L HLV++ + KQ EL IL+FG E+LFK++ + ++K+
Sbjct: 1196 QVAKKKMMLTHLVVRPGLGSKAGSMSKQ----ELDDILKFGTEQLFKDELGEGDNKE 1248
Score = 380 (138.8 bits), Expect = 1.5e-30, Sum P(4) = 1.5e-30
Identities = 103/287 (35%), Positives = 145/287 (50%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKV-VEDVRFRKMVSREEIELND 71
E EF +KW +S+ HC W +L+ L+ NY +K +E+ +M + + + +
Sbjct: 548 EREFFVKWCNKSYWHCSWVQELQLE-LNCQVMFRNYQRKTDMEEPPNLEMGAEGDEDKSC 606
Query: 72 VSKEMDLDIIKQNSQ-------VERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEATW 121
K D + + +E + RI S D NV YL+KW+ L Y ++TW
Sbjct: 607 KRKNKDPFYARMEDKYGRFGVKIEWLFIHRILNHSVDKKNNV--HYLIKWRDLPYDQSTW 664
Query: 122 EKDE--IIDFAQDAIDEYKAREAAMAEQG----KMVDLQ-RKKGKASLR-------KLDE 167
E ++ + DF + RE + E+G KM ++ RK + K D
Sbjct: 665 ESEDMDVPDFETYKQHYWNHRELMLGEEGRPGKKMKKVKVRKTERPPANPVVDPTIKFDR 724
Query: 168 QPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQI 225
QP++L GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 725 QPDYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHS 784
Query: 226 PGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF 272
GPFLV PLST+ NW +EF W P M V+ YVG + SR V ++ EF
Sbjct: 785 KGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEF 831
Score = 74 (31.1 bits), Expect = 3.2e-140, Sum P(3) = 3.2e-140
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI +HG+ W++++ D R + + E+ FL R
Sbjct: 1772 WHRRHDYWLLAGIIFHGYARWQDVQNDPRFAILNEPFKGEMSRGN-FLEIKNKFLARRFK 1830
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1831 LLEQAL 1836
Score = 52 (23.4 bits), Expect = 3.2e-140, Sum P(3) = 3.2e-140
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 101 GNVTQEYLVKWKGLSYAEATWEKDEIIDF-AQDAIDEYKAREAAMAEQGKM-VDLQRKKG 158
G +E+ VKW SY +W ++ ++ Q Y+ R+ M E + + + +
Sbjct: 545 GRKEREFFVKWCNKSYWHCSWVQELQLELNCQVMFRNYQ-RKTDMEEPPNLEMGAEGDED 603
Query: 159 KASLRKLDEQPEWLR 173
K+ RK ++ P + R
Sbjct: 604 KSCKRK-NKDPFYAR 617
Score = 50 (22.7 bits), Expect = 5.1e-140, Sum P(3) = 5.1e-140
Identities = 24/126 (19%), Positives = 58/126 (46%)
Query: 1 MSHLFDSEPDWNEMEFLIKWKGQSHLHCQWKSF-AELQNLSGFKK-VLNYAKKVV-EDVR 57
++H D + N + +LIKW+ + W+S ++ + +K+ N+ + ++ E+ R
Sbjct: 638 LNHSVDKK---NNVHYLIKWRDLPYDQSTWESEDMDVPDFETYKQHYWNHRELMLGEEGR 694
Query: 58 FRKMVSREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVK---WKGL 114
K + + +++ + ++ + +R D + DS+G Y ++ W
Sbjct: 695 PGKKMKK--VKVRKTERPPANPVVDPTIKFDRQ-PDYL--DSTGGTLHPYQLEGLNWLRF 749
Query: 115 SYAEAT 120
S+A+ T
Sbjct: 750 SWAQGT 755
Score = 46 (21.3 bits), Expect = 1.5e-30, Sum P(4) = 1.5e-30
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 353 ALLHFLDHDKFKSKDDFIQNYKN-LSSFNENE-LANLHMELRPHILRRIIKDVEKSLPPK 410
A+ LD ++ ++D +Q+ LSSF + + E + R IIK E P
Sbjct: 1260 AIDRLLDRNQDATEDTELQSMNEYLSSFKVAQYVVKDEDEEEEDVDREIIKQEESVDPDY 1319
Query: 411 IERILR 416
E++LR
Sbjct: 1320 WEKLLR 1325
Score = 41 (19.5 bits), Expect = 4.8e-30, Sum P(4) = 4.8e-30
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 361 DKFKSKDDF-IQNYKNLSSFNE-NELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
D+ ++ D+ + + + F+E +E AN RP + + D +K LPP + R+
Sbjct: 1368 DQSDNQSDYSVASEEGDEDFDERSEAANSR---RPS-RKGLRNDKDKPLPPLLARV 1419
Score = 39 (18.8 bits), Expect = 1.5e-30, Sum P(4) = 1.5e-30
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 455 ELKKCCNHPFLFESADHGY 473
E KK F+F AD G+
Sbjct: 1730 EKKKAVKQRFMFNIADGGF 1748
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 1337 (475.7 bits), Expect = 5.3e-140, Sum P(3) = 5.3e-140
Identities = 310/775 (40%), Positives = 455/775 (58%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHCQW A +++L K++ K RF+ + + L+++
Sbjct: 775 EFYVKYKNFSYLHCQW---ASIEDLEKDKRIQQKIK------RFKAKQGQNKF-LSEIED 824
Query: 75 EM-DLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
E+ + D + +V+RI+ S D G YLVKW L Y ++TWE + ID A+
Sbjct: 825 ELFNPDYV----EVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAK-- 878
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I+E+ E M+ + + ++R +K + E+ KLR+YQLEG+N+L+ +W
Sbjct: 879 IEEF---EKLMSREPETERVERPPAD-DWKKSESSREYKNNNKLREYQLEGVNWLLFNWY 934
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + + I GPFLV+ PLST+ NW +EFR W +N
Sbjct: 935 NMRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LN 992
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNYL 309
V+VY G++ASR Q YE Y GR IK F+ ++TT+E++L D L I W +
Sbjct: 993 VVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCV 1052
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ F
Sbjct: 1053 VIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTF 1112
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
+Q + +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 1113 MQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRA 1170
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGY---GGDTSINDTS-- 483
ILE+NF L+KG + N +LLN ++EL+KCCNHP+L A+ +T D+
Sbjct: 1171 ILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDF 1230
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
+L+ +I ++GKLV++DKLL +L HRVLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1231 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 1290
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 603
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1291 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1350
Query: 604 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNEL 662
HRIGQ + V IYR +T S E ++ ++A K+ LD V+Q ++ E + +Q E+
Sbjct: 1351 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPNGVQQLSKKEI 1410
Query: 663 SAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA 722
+LR GA D DE SK DID ++F +
Sbjct: 1411 EDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILLRRTHTITIESEGKGSTFAKASFVAS 1467
Query: 723 -NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSYAEANEPE 768
N DD +FW +W K +A+ + + PR + T+ Y+ E E
Sbjct: 1468 GNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKEDE 1522
Score = 68 (29.0 bits), Expect = 5.3e-140, Sum P(3) = 5.3e-140
Identities = 42/198 (21%), Positives = 76/198 (38%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E +R +R + E S + + W+ +R+ FY
Sbjct: 1871 QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWT-----RREEADFY 1925
Query: 828 RAVMKFG-----NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV-GSPDPK 881
R V FG + Q A + E + + F + CR + PD +
Sbjct: 1926 RVVSTFGVIFDPAKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDDE 1985
Query: 882 GPPLLDFFG--VSVKANDLINRVEELQLLAKRISRYEDPIKQFRVL--SYLKPSNWSKGC 937
P L +A+ + R+E L+ + +++ + ++ ++ S P W C
Sbjct: 1986 PPDLSSAIEPITEERASRTLYRIELLRRIREQVLHHPQLAERLKLCQPSLDLPEWWE--C 2043
Query: 938 GWNQFDDARLLLGIHYHG 955
G + D LL+G HG
Sbjct: 2044 GRHDRD---LLVGAAKHG 2058
Score = 64 (27.6 bits), Expect = 1.4e-139, Sum P(3) = 1.4e-139
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
P++W W++ D LL+G+ HG+ + ++R D L +++
Sbjct: 1732 PTDW-----WDKEADKSLLIGVFKHGYEKYNSMRADPALCFLERV 1771
Score = 44 (20.5 bits), Expect = 5.3e-140, Sum P(3) = 5.3e-140
Identities = 16/45 (35%), Positives = 20/45 (44%)
Query: 1209 HQIYSKLKQERQEEAGIGPSHINGSA------SGSIDNDLNFSTF 1247
H+ SK E+ EA GP NGS +G N L F+ F
Sbjct: 2793 HEDESK-DPEKSTEAAPGPDSANGSVGAATGPAGLPSNPLAFNPF 2836
Score = 40 (19.1 bits), Expect = 4.8e-137, Sum P(3) = 4.8e-137
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 749 ALAPRAARNTKSYAEANEPERSNKRKKKGS-ELQEPQERVHKRRKAE 794
+LA +A S + + E S + K + L P++R +RRK E
Sbjct: 2305 SLAELSAVGQASISGSEELTASPQLSKDDALNLSVPRQRRRRRRKIE 2351
Score = 39 (18.8 bits), Expect = 6.1e-137, Sum P(3) = 6.1e-137
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 740 PEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQER 786
P A Q + A A A K+ + +PE + + +GS + Q+R
Sbjct: 2108 PAAPGQEDKAGAAEA----KAREASEKPEGKEEEEAEGSGKDQRQDR 2150
Score = 38 (18.4 bits), Expect = 2.3e-139, Sum P(3) = 2.3e-139
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1216 KQERQEEAGIGPSHINGSASGSIDN 1240
+Q+R+ E G G S G G +D+
Sbjct: 2147 RQDREAELGAGKSEPRGVEVG-VDS 2170
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 1333 (474.3 bits), Expect = 7.6e-140, Sum P(3) = 7.6e-140
Identities = 312/798 (39%), Positives = 468/798 (58%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W A Q L K++ K RF+ ++ L D+ +
Sbjct: 714 EFFVKYKNYSYLHCEW---ATEQQLLKDKRIQQKIK------RFKLRQAQRAHFLADMEE 764
Query: 75 E-MDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQD 132
E + D + +V+RI+ +D +G YLVKW L Y ++TWE E +D A+
Sbjct: 765 EPFNPDYV----EVDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAK- 819
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
I+E++ +A+ + L R +K+++ E+ G +LR+YQLEGLN+L+ +W
Sbjct: 820 -IEEFEQLQASRPDTRH---LDRPPSNI-WKKIEQSREYKNGNQLREYQLEGLNWLLFNW 874
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+QS++ L + I GPFL++ PLST++NW +EFR W +
Sbjct: 875 YNRRNCILADEMGLGKTIQSITFLYEIL-LTGIRGPFLIIAPLSTIANWEREFRTWTD-I 932
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNY 308
NV+VY G+ SR++ QQYE Y GR I+ F ++TT+E++L L+ I W
Sbjct: 933 NVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIDWRC 992
Query: 309 LMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDD 368
+++DEAHRLKN +L L + ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+
Sbjct: 993 VIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSEST 1052
Query: 369 FIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
F+Q + +L + E ++ L L+P +LRR+ +DVEK L PK E I+ VE++ +QK+YY+
Sbjct: 1053 FMQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYR 1110
Query: 429 WILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD--TSINDTSK- 484
ILE+NF L+KG + N +L+N ++EL+KCCNHP+L + A+ G+ + N ++
Sbjct: 1111 AILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASD 1170
Query: 485 --LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
L+ +I S+GKLV++DKLL ++ H+VLIFSQMVR LDIL +Y+ +K + ++R+DG
Sbjct: 1171 FHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGR 1230
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1231 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1290
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGS-WRRKKQRKGNE 661
HRIGQ + V +YR VT S E ++ +RA K+ LD V+Q ++ S +Q E
Sbjct: 1291 CHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKE 1350
Query: 662 LSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKV 721
+ +LR GA E+ DE SK DID ++F
Sbjct: 1351 IEDLLRRGAYGAIMEEE-DEGSK--FCEEDIDQILLRRTKTITIESEGRGSTFAKASFVA 1407
Query: 722 A-NFCGAE-DDGSFWSRWIKPEAV----AQAEDALA---PRAARNTKSY-AEANEPERSN 771
+ N DD +FW +W K + ++L PR + T+ + A +E +
Sbjct: 1408 SGNRTDISLDDPNFWQKWAKKAELDIDTISGRNSLVIDTPRIRKQTRPFSATKDELAELS 1467
Query: 772 KRKKKGSE---LQEPQER 786
+ + +G E L+ P +R
Sbjct: 1468 EAESEGEEKPKLRRPCDR 1485
Score = 67 (28.6 bits), Expect = 7.6e-140, Sum P(3) = 7.6e-140
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 929 KPSNWSKGCGWNQFD-DARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
+P + W FD D LL+G+ HG+ + IR D L +++
Sbjct: 1663 EPDHSEVPAAWWDFDADKSLLIGVFKHGYEKYNTIRADPALCFLERV 1709
Score = 47 (21.6 bits), Expect = 7.6e-140, Sum P(3) = 7.6e-140
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 1098 EDVMADEIRTLQRLQRLQATSD----NLPKEKVAS 1128
ED + + L RL+ LQ+TS+ NLPK AS
Sbjct: 2372 EDGALGQQQYLTRLRELQSTSETSLVNLPKAVPAS 2406
Score = 44 (20.5 bits), Expect = 2.0e-137, Sum P(3) = 2.0e-137
Identities = 29/145 (20%), Positives = 59/145 (40%)
Query: 819 SKRDATRFYRAVMKFG-----NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAV 873
++R+ FYR V FG ++ Q A + + + + CR
Sbjct: 1838 TRREEADFYRVVSTFGVVFDPDRGQFDWTKFRALARLHKKTDNSLEKYLCAFMSMCRRVC 1897
Query: 874 EVGSPDPKGPPLLDFFGVSV-KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSN 932
+ S + P + ++ +A+ + R+E L+ + ++ R+ ++ + L + P
Sbjct: 1898 RLPSKEELVDPNIFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLK-LCHPNPDL 1956
Query: 933 --WSKGCGWNQFDDARLLLGIHYHG 955
W + CG + D LL+G HG
Sbjct: 1957 PIWWE-CGSHDRD---LLIGAAKHG 1977
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 1347 (479.2 bits), Expect = 7.6e-140, Sum P(3) = 7.6e-140
Identities = 323/839 (38%), Positives = 480/839 (57%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHCQW A +++L K++ K RF+ + + L+++
Sbjct: 825 EFYVKYKNFSYLHCQW---ASIEDLEKDKRIQQKIK------RFKAKQGQNKF-LSEIED 874
Query: 75 EM-DLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
E+ + D + +V+RI+ S D G YLVKW L Y ++TWE+ + ID A+
Sbjct: 875 ELFNPDYV----EVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAK-- 928
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I+E+ E M+ + + ++R +K + E+ KLR+YQLEG+N+L+ +W
Sbjct: 929 IEEF---EKLMSREPETERVERPPAD-DWKKSESSREYKNNNKLREYQLEGVNWLLFNWY 984
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + + I GPFLV+ PLST+ NW +EFR W +N
Sbjct: 985 NMRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LN 1042
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNYL 309
V+VY G++ASR Q YE Y GR IK F+ ++TT+E++L D L I W +
Sbjct: 1043 VVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCV 1102
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ F
Sbjct: 1103 VIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTF 1162
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
+Q + +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 1163 MQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRA 1220
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD--TSINDTS--- 483
ILE+NF L+KG + N +LLN ++EL+KCCNHP+L A+ + + N S
Sbjct: 1221 ILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDF 1280
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
+L+ +I ++GKLV++DKLL +L HRVLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1281 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 1340
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 603
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1341 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1400
Query: 604 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNEL 662
HRIGQ + V IYR +T S E ++ ++A K+ LD V+Q ++ E + +Q E+
Sbjct: 1401 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEI 1460
Query: 663 SAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA 722
+LR GA D DE SK DID ++F +
Sbjct: 1461 EDLLRKGAYGALM-DEEDEGSK--FCEEDIDQILLRRTHTITIESEGKGSTFAKASFVAS 1517
Query: 723 -NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSYAEANEPE----- 768
N DD +FW +W K +A+ + + PR + T+ Y+ E E
Sbjct: 1518 GNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKEDELMEFS 1577
Query: 769 --RSNKRKKKGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNLSKRDAT 824
S+ +K ++ + PQ++ ++E F V + G S+G KR T
Sbjct: 1578 DLESDSEEKPCAKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGRY-KRQLT 1635
Score = 64 (27.6 bits), Expect = 7.6e-140, Sum P(3) = 7.6e-140
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
P++W W++ D LL+G+ HG+ + ++R D L +++
Sbjct: 1782 PADW-----WDKEADKSLLIGVFKHGYEKYNSMRADPALCFLERV 1821
Score = 64 (27.6 bits), Expect = 7.6e-140, Sum P(3) = 7.6e-140
Identities = 42/198 (21%), Positives = 76/198 (38%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E +R +R + E S + + W+ +R+ FY
Sbjct: 1921 QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWT-----RREEADFY 1975
Query: 828 RAVMKFGN-----QSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVG-SPDPK 881
R V FG + Q A + E + + F + CR + PD +
Sbjct: 1976 RVVSTFGVIFDPVKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPVKPDDE 2035
Query: 882 GPPLLDFFG--VSVKANDLINRVEELQLLAKRISRYEDPIKQFRVL--SYLKPSNWSKGC 937
P L +A+ + R+E L+ + +++ + ++ ++ S P W C
Sbjct: 2036 PPDLSSIIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWE--C 2093
Query: 938 GWNQFDDARLLLGIHYHG 955
G + D LL+G HG
Sbjct: 2094 GRHDRD---LLVGAAKHG 2108
Score = 50 (22.7 bits), Expect = 1.4e-137, Sum P(2) = 1.4e-137
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 754 AARNTKSYAEANEPERS-NKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQV 810
A NT + + EPE S +K ++KG+E ++ + + +E S +V D A+ V
Sbjct: 2823 ATGNTTTASSQGEPEDSTSKGEEKGNENED------ENKDSEKSTDAVSAADSANGSV 2874
Score = 38 (18.4 bits), Expect = 2.6e-136, Sum P(2) = 2.6e-136
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 774 KKKGSELQEPQERVHKRRKAE 794
K+ L P++R +RRK E
Sbjct: 2388 KEDALNLSVPRQRRRRRRKIE 2408
Score = 37 (18.1 bits), Expect = 7.6e-140, Sum P(3) = 7.6e-140
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 1063 KPQRVEQPLTKEEGEMSDNEEVYE-QFKEVKWMEWCE 1098
K + E P KE+ E + EE + KE K + CE
Sbjct: 2174 KVEEPENPAAKEKCEGKEEEEETDGSGKESK--QECE 2208
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 1341 (477.1 bits), Expect = 1.6e-139, Sum P(3) = 1.6e-139
Identities = 325/838 (38%), Positives = 477/838 (56%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHCQW A +++L K++ K+ K +S EIE +D+
Sbjct: 815 EFYVKYKNFSYLHCQW---ASVEDLEKDKRIQQKIKRFKSKQGQSKFLS--EIE-DDL-- 866
Query: 75 EMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAI 134
+ D + +V+RI+ S D G YLVKW L Y ++TWE + ID Q I
Sbjct: 867 -FNPDYV----EVDRIMDFARSTDDRGEPVIHYLVKWCSLPYEDSTWELKQDID--QTKI 919
Query: 135 DEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRN 194
+E+ E M+ + + ++R +K + E+ KLR+YQLEG+N+L+ +W N
Sbjct: 920 EEF---EKLMSREPETERVERPPAD-DWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN 975
Query: 195 DTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNV 254
N ILADEMGLGKT+QS++ L + + I GPFLV+ PLST+ NW +EFR W +NV
Sbjct: 976 MRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LNV 1033
Query: 255 IVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNYLM 310
+VY G++ASR Q YE Y GR IK F+ ++TT+E++L D L I W ++
Sbjct: 1034 VVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVV 1093
Query: 311 VDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFI 370
+DEAHRLKN +L L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ F+
Sbjct: 1094 IDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFM 1153
Query: 371 QNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWI 430
Q + +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+ I
Sbjct: 1154 QEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAI 1211
Query: 431 LERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD--TSINDTS---K 484
LE+NF L+KG + N +LLN ++EL+KCCNHP+L A+ + + N S +
Sbjct: 1212 LEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQ 1271
Query: 485 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK 544
L+ +I ++GKLV++DKLL +L HRVLIFSQMVR LDIL +Y+ + + ++R+DG +
Sbjct: 1272 LQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVR 1331
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R H
Sbjct: 1332 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1391
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNELS 663
RIGQ + V IYR +T S E ++ ++A K+ LD V+Q ++ E + +Q E+
Sbjct: 1392 RIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIE 1451
Query: 664 AILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA- 722
+LR GA D DE SK DID ++F +
Sbjct: 1452 DLLRKGAYGALM-DEEDEGSK--FCEEDIDQILLRRTHTITIESEGKGSTFAKASFVASG 1508
Query: 723 NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSYAEANEPE------ 768
N DD +FW +W K +A+ + + PR + T+ Y+ E E
Sbjct: 1509 NRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKEDELMEFSD 1568
Query: 769 -RSNKRKKKGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNLSKRDAT 824
S+ +K ++ + PQ++ ++E F V + G S+G KR T
Sbjct: 1569 LESDSEEKPCAKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGRY-KRQLT 1625
Score = 64 (27.6 bits), Expect = 1.6e-139, Sum P(3) = 1.6e-139
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
P++W W++ D LL+G+ HG+ + ++R D L +++
Sbjct: 1772 PTDW-----WDREADKSLLIGVFKHGYEKYNSMRADPALCFLERV 1811
Score = 62 (26.9 bits), Expect = 2.5e-139, Sum P(3) = 2.5e-139
Identities = 41/198 (20%), Positives = 75/198 (37%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E +R +R + E S + + W+ +R+ FY
Sbjct: 1911 QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWT-----RREEADFY 1965
Query: 828 RAVMKFGN-----QSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV-GSPDPK 881
R V FG + Q A + E + + F + CR + P+ +
Sbjct: 1966 RVVSTFGVIFDPVKQQFDWNQFRAFARLDKKSDESLGKYFSCFVAMCRRVCRMPAKPEDE 2025
Query: 882 GPPLLDFFG--VSVKANDLINRVEELQLLAKRISRYEDPIKQFRVL--SYLKPSNWSKGC 937
P L +A+ + R+E L+ + +++ + + ++ S P W C
Sbjct: 2026 PPDLASLIEPITEERASRTLYRIELLRKIREQVLHHPQLSDRLKLCQPSLDLPEWWE--C 2083
Query: 938 GWNQFDDARLLLGIHYHG 955
G + D LL+G HG
Sbjct: 2084 GRHDRD---LLVGAAKHG 2098
Score = 48 (22.0 bits), Expect = 9.7e-137, Sum P(2) = 9.7e-137
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 754 AARNTKSYAEANEPER-SNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQV 810
A NT + + EPE ++K ++KG++ ++ + R +E S +V D A+ V
Sbjct: 2812 ATGNTTTASSQGEPEDGTSKAEEKGNDNED------ENRDSEKSTDTVSAADSANGSV 2863
Score = 47 (21.6 bits), Expect = 1.2e-136, Sum P(2) = 1.2e-136
Identities = 35/133 (26%), Positives = 55/133 (41%)
Query: 763 EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK-R 821
E + S +KGSE E ++ + E S P + + S +LS R
Sbjct: 2211 EGSADPGSKSVSEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKTFDEE-SNASLSTAR 2269
Query: 822 DATR--FYRAVMKFGNQSQISLIARDAGGAVATAPQE-VVVELFDILIDGCREAVEVGSP 878
D TR FY M+ G+ S L+ + A + P++ V++ D + C EAV G
Sbjct: 2270 DETRDGFY---MEDGDASVAQLL-HERTFAFSFWPKDRVMINRLDNI---C-EAVLKGKW 2321
Query: 879 DPKGPPLLDFFGV 891
+ DF G+
Sbjct: 2322 PVNRRQMFDFQGL 2334
Score = 40 (19.1 bits), Expect = 1.6e-139, Sum P(3) = 1.6e-139
Identities = 14/63 (22%), Positives = 29/63 (46%)
Query: 1021 SKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSD 1080
+K G+++ E + S +K + KG GSA ++ ++ + E+ ++ E S
Sbjct: 2189 AKDGKQECE----VEASSVKGELKGVEGSADPGSKSVSEKGSEEDEEEKLEDDDKSEESS 2244
Query: 1081 NEE 1083
E
Sbjct: 2245 QPE 2247
Score = 37 (18.1 bits), Expect = 1.4e-135, Sum P(2) = 1.4e-135
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 774 KKKGSELQEPQERVHKRRKAE 794
K L P++R +RRK E
Sbjct: 2377 KDDALNLSVPRQRRRRRRKVE 2397
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 1339 (476.4 bits), Expect = 1.6e-139, Sum P(3) = 1.6e-139
Identities = 324/838 (38%), Positives = 476/838 (56%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHCQW A +++L K++ K+ K +S EIE +D+
Sbjct: 814 EFYVKYKNFSYLHCQW---ASVEDLEKDKRIQQKIKRFKSKQGQSKFLS--EIE-DDL-- 865
Query: 75 EMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAI 134
+ D + +V+RI+ S D G YLVKW L Y ++TWE + +D A+ I
Sbjct: 866 -FNPDYV----EVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDLDQAK--I 918
Query: 135 DEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRN 194
+E+ E M+ + + ++R +K + E+ KLR+YQLEG+N+L+ +W N
Sbjct: 919 EEF---EKLMSREPETERVERPPAD-DWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN 974
Query: 195 DTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNV 254
N ILADEMGLGKT+QS++ L + + I GPFLV+ PLST+ NW +EFR W +NV
Sbjct: 975 MRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LNV 1032
Query: 255 IVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNYLM 310
+VY G++ASR Q YE Y GR IK F+ ++TT+E++L D L I W ++
Sbjct: 1033 VVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVV 1092
Query: 311 VDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFI 370
+DEAHRLKN +L L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ F+
Sbjct: 1093 IDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFM 1152
Query: 371 QNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWI 430
Q + +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+ I
Sbjct: 1153 QEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAI 1210
Query: 431 LERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGY---GGDTSINDTS--K 484
LE+NF L+KG + N +LLN ++EL+KCCNHP+L A+ D D+ +
Sbjct: 1211 LEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKDAHNADSPDFQ 1270
Query: 485 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK 544
L+ +I ++GKLV++DKLL +L HRVLIFSQMVR LDIL +Y+ + + ++R+DG +
Sbjct: 1271 LQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVR 1330
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R H
Sbjct: 1331 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1390
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNELS 663
RIGQ + V IYR +T S E ++ ++A K+ LD V+Q ++ E + +Q E+
Sbjct: 1391 RIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIE 1450
Query: 664 AILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA- 722
+LR GA D DE SK DID ++F +
Sbjct: 1451 DLLRKGAYGALM-DEEDEGSK--FCEEDIDQILLRRTHTITIESEGKGSTFAKASFVASG 1507
Query: 723 NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSYAEANEPE------ 768
N DD +FW +W K +A+ + + PR + T+ Y+ E E
Sbjct: 1508 NRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKEDELMEFSD 1567
Query: 769 -RSNKRKKKGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGNLSKRDAT 824
S+ +K + + PQ++ ++E F V + G S+G KR T
Sbjct: 1568 LESDSEEKPCIKPRRPQDKTQGYARSECFRVEKNLLVYGWGRWTDILSHGRY-KRQLT 1624
Score = 64 (27.6 bits), Expect = 1.6e-139, Sum P(3) = 1.6e-139
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
P++W W++ D LL+G+ HG+ + ++R D L +++
Sbjct: 1771 PADW-----WDKEADKSLLIGVFKHGYEKYNSMRADPALCFLERV 1810
Score = 63 (27.2 bits), Expect = 2.0e-139, Sum P(3) = 2.0e-139
Identities = 41/198 (20%), Positives = 75/198 (37%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E +R +R + E S + + W+ +R+ FY
Sbjct: 1910 QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWT-----RREEADFY 1964
Query: 828 RAVMKFGN-----QSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEV-GSPDPK 881
R V FG + Q A + E + + F + CR + P+ +
Sbjct: 1965 RVVSTFGVIFDPVKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPEDE 2024
Query: 882 GPPLLDFFG--VSVKANDLINRVEELQLLAKRISRYEDPIKQFRVL--SYLKPSNWSKGC 937
P L +A+ + R+E L+ + +++ + + ++ S P W C
Sbjct: 2025 PPDLASLIEPITEERASRTLYRIELLRKIREQVLHHPQLSDRLKLCQPSLDLPEWWE--C 2082
Query: 938 GWNQFDDARLLLGIHYHG 955
G + D LL+G HG
Sbjct: 2083 GRHDRD---LLVGAAKHG 2097
Score = 48 (22.0 bits), Expect = 1.6e-136, Sum P(2) = 1.6e-136
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 754 AARNTKSYAEANEPER-SNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQV 810
A NT + + EPE ++K ++KG++ ++ + R +E S +V D A+ V
Sbjct: 2811 ATGNTTTASSQGEPEDGTSKAEEKGNDNED------ENRDSEKSTDAVSAADSANGSV 2862
Score = 46 (21.3 bits), Expect = 1.2e-137, Sum P(3) = 1.2e-137
Identities = 35/147 (23%), Positives = 58/147 (39%)
Query: 748 DALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGAS 807
+A A K + +P S +KGSE E ++ + E S P +
Sbjct: 2196 EAEASSVKGELKGVEGSGDPG-SKSVSEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGK 2254
Query: 808 AQVRDWSYGNLSKRDATR--FYRAVMKFGNQSQISLIARDAGGAVATAPQE-VVVELFDI 864
+ + + RD TR FY M+ G+ S L+ + A + P++ V++ D
Sbjct: 2255 TFDEESNASMSTARDETRDGFY---MEDGDPSVAQLL-HERTFAFSFWPKDRVMINRLDN 2310
Query: 865 LIDGCREAVEVGSPDPKGPPLLDFFGV 891
+ C EAV G + DF G+
Sbjct: 2311 I---C-EAVLKGKWPINRRQMFDFQGL 2333
Score = 42 (19.8 bits), Expect = 1.6e-139, Sum P(3) = 1.6e-139
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 1255 KGHKNVSTYQMTE--PIHKGIDPKKFEA-WKRRRRAETDMYSQAQPMLQRPMNNGTRLPD 1311
KG ++ QM + + G P ++ ++R AE M SQA + +L
Sbjct: 2317 KGKWPINRRQMFDFQGLVPGYPPSTVDSPLQKRSFAELSMVSQASVSASEDITTSPQLSK 2376
Query: 1312 PNSLGILGAAPTDNRR 1327
++L + + P RR
Sbjct: 2377 DDALNL--SVPRQRRR 2390
Score = 37 (18.1 bits), Expect = 2.3e-135, Sum P(2) = 2.3e-135
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 774 KKKGSELQEPQERVHKRRKAE 794
K L P++R +RRK E
Sbjct: 2376 KDDALNLSVPRQRRRRRRKVE 2396
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 1343 (477.8 bits), Expect = 8.2e-139, Sum P(2) = 8.2e-139
Identities = 324/853 (37%), Positives = 487/853 (57%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W A Q L K++ K RF+ ++ D+ +
Sbjct: 716 EFFVKYKNYSYLHCEW---ATEQQLLKDKRIQQKIK------RFKLRQAQRAHFFADMEE 766
Query: 75 E-MDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQD 132
E + D + +V+R++ +D +G YLVKW L Y ++TWE E +D A+
Sbjct: 767 EPFNPDYV----EVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAK- 821
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
I+E++ +A+ + L R +K+D+ ++ G +LR+YQLEGLN+L+ +W
Sbjct: 822 -IEEFEQLQASRPDTRH---LDRPPPNI-WKKIDQSRDYKNGNQLREYQLEGLNWLLFNW 876
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+QS++ L + I GPFL++ PLST++NW +EFR W +
Sbjct: 877 YNRRNCILADEMGLGKTIQSITFLYEIL-LTGIRGPFLIIAPLSTIANWEREFRTWTD-I 934
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNY 308
NV+VY G+ SR++ QQYE Y GR I+ F ++TT+E++L L+ I+W
Sbjct: 935 NVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRC 994
Query: 309 LMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDD 368
+++DEAHRLKN +L L + ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+
Sbjct: 995 VIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSEST 1054
Query: 369 FIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
F+Q + +L + E ++ L L+P +LRR+ +DVEK L PK E I+ VE++ +QK+YY+
Sbjct: 1055 FMQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYR 1112
Query: 429 WILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD--TSINDTSK- 484
ILE+NF L+KG + N +L+N ++EL+KCCNHP+L + A+ G+ + N +
Sbjct: 1113 AILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASD 1172
Query: 485 --LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
L+ +I S+GKLV++DKLL ++ H+VLIFSQMVR LDIL +Y+ +K + ++R+DG
Sbjct: 1173 FHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGR 1232
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1233 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1292
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNE 661
HRIGQ + V +YR VT S E ++ +RA K+ LD V+Q ++ E + +Q E
Sbjct: 1293 CHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKE 1352
Query: 662 LSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKV 721
+ +LR GA E+ DE SK DID ++F
Sbjct: 1353 IEDLLRRGAYGAIMEEE-DEGSK--FCEEDIDQILLRRTKTITIESEGRGSTFAKASFVA 1409
Query: 722 A-NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSY-------AEAN 765
+ N DD +FW +W K +A++ + PR + T+ + AE +
Sbjct: 1410 SGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELS 1469
Query: 766 EPERSNKRKKKGSELQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGN----LSK 820
EPE K K L+ P ER + + E F V + G S+G L++
Sbjct: 1470 EPESEGDEKPK---LRRPCERSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNE 1526
Query: 821 RDATRFYRAVMKF 833
D RA++ +
Sbjct: 1527 HDVEIICRALLAY 1539
Score = 65 (27.9 bits), Expect = 8.2e-139, Sum P(2) = 8.2e-139
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 939 WNQFD-DARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
W FD D LL+G+ HG+ + IR D L +++
Sbjct: 1675 WWDFDADKSLLIGVFKHGYEKYNTIRADPALCFLERV 1711
Score = 51 (23.0 bits), Expect = 2.5e-137, Sum P(2) = 2.5e-137
Identities = 35/181 (19%), Positives = 72/181 (39%)
Query: 819 SKRDATRFYRAVMKFG-----NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAV 873
++R+ FYR V FG ++ Q A + + + + + CR
Sbjct: 1840 TRREEADFYRVVSTFGVVFDPDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVC 1899
Query: 874 EVGSPDPKGPPLLDFFGVSV-KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSN 932
+ S + P + ++ +A+ + R+E L+ + ++ R+ ++ + L + P
Sbjct: 1900 RLPSKEELVDPSIFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLK-LCHPNPDL 1958
Query: 933 --WSKGCGWNQFDDARLLLGIHYHGFGNWE-NIRLDERLGLT---KKIAPVELQHHETFL 986
W + CG + D LL+G HG + +I D L + + ++ H T
Sbjct: 1959 PVWWE-CGSHDRD---LLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTST 2014
Query: 987 P 987
P
Sbjct: 2015 P 2015
Score = 39 (18.8 bits), Expect = 4.6e-136, Sum P(2) = 4.6e-136
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 754 AARNTKSYAEANEPERSNKRKKKGSELQEPQERV----HKRRKAEFSVPSV 800
A+ ++ S + ++ S+ ++ SE +E Q+R H + E SV S+
Sbjct: 2176 ASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHMKAYDEESVASL 2226
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 1331 (473.6 bits), Expect = 1.2e-138, Sum P(3) = 1.2e-138
Identities = 310/799 (38%), Positives = 471/799 (58%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W A Q L K++ K RF+ ++ D+ +
Sbjct: 712 EFFVKYKNYSYLHCEW---ATEQQLLKDKRIQQKIK------RFKLRQAQRAHFFADMEE 762
Query: 75 E-MDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQD 132
E + D + +V+R++ + +D +G YLVKW L Y ++TWE E +D A+
Sbjct: 763 EPFNPDYV----EVDRVLEVSLCEDKDTGEPVVYYLVKWCSLPYEDSTWELKEDVDQAK- 817
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
I+E++ +A+ + + L R S +K++ E+ G +LR+YQLEGLN+L+ +W
Sbjct: 818 -IEEFEQLQASRPDSRR---LDRPPPN-SWKKIEHSREYKNGNQLREYQLEGLNWLLFNW 872
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+QS++ L + I GPFL++ PLST++NW +EFR W +
Sbjct: 873 YNRRNCILADEMGLGKTIQSITFLYEIL-LSGIRGPFLIIAPLSTITNWEREFRTWTD-L 930
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNY 308
NV+VY G+ SR++ QQYE Y GR ++ F ++TT+E++L L+ I+W
Sbjct: 931 NVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITTFEMILGGCPELNAIEWRC 990
Query: 309 LMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDD 368
+++DEAHRLKN +L L + ++K+L+TGTPLQN+VEEL++LLHFL+ +F ++
Sbjct: 991 VIIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAEST 1050
Query: 369 FIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
F+Q + +L + E ++ L L+P +LRR+ +DVEK L PK E I+ VE++ +QK+YY+
Sbjct: 1051 FMQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYR 1108
Query: 429 WILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD--TSINDTSK- 484
ILE+NF L+KG + N +L+N ++EL+KCCNHP+L + A+ G+ + N T+
Sbjct: 1109 AILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPTAPD 1168
Query: 485 --LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
L+ +I S+GKLV++DKLL ++ H+VLIFSQMVR LDIL +Y+ +K + ++R+DG
Sbjct: 1169 FHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGR 1228
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ-AMS 601
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQ A +
Sbjct: 1229 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQKAQA 1288
Query: 602 RAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGN 660
R HRIGQ + V +YR +T S E ++ +RA K+ LD V+Q ++ E S +Q
Sbjct: 1289 RCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKK 1348
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
E+ +LR GA D DE SK DID ++F
Sbjct: 1349 EIEDLLRRGAYGAIM-DEEDEGSK--FCEEDIDQILQRRTKTITIESEGRGSTFAKASFV 1405
Query: 721 VA-NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSY-AEANEPERS 770
+ N DD +FW +W K +A++ + PR + T+ + A +E
Sbjct: 1406 ASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAEL 1465
Query: 771 NKRKKKGSE---LQEPQER 786
++ + +G E L+ P +R
Sbjct: 1466 SEVESEGEEKPKLRRPCDR 1484
Score = 63 (27.2 bits), Expect = 1.2e-138, Sum P(3) = 1.2e-138
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
P+ W W+ D LL+G+ HG+ + IR D L +++
Sbjct: 1669 PAEW-----WDAEADKSLLIGVFKHGYEKYNTIRADPALCFLERV 1708
Score = 43 (20.2 bits), Expect = 1.6e-136, Sum P(3) = 1.6e-136
Identities = 28/145 (19%), Positives = 57/145 (39%)
Query: 819 SKRDATRFYRAVMKFG-----NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAV 873
++R+ FYR V FG + + A + E + + + CR
Sbjct: 1837 TRREEADFYRVVSTFGVVFDPERGRFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVC 1896
Query: 874 EVGSPDPKGPPLLDFFGVSV-KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK--P 930
+ S + P + ++ +A+ + R+E L+ + ++ R+ ++ ++ P
Sbjct: 1897 RLPSKEELVDPNIFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLP 1956
Query: 931 SNWSKGCGWNQFDDARLLLGIHYHG 955
W CG + D LL+G HG
Sbjct: 1957 VWWE--CGTHDRD---LLIGAAKHG 1976
Score = 38 (18.4 bits), Expect = 1.2e-138, Sum P(3) = 1.2e-138
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 1035 PISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEE 1075
P SRL K P KV + K+ + E+ ++ EE
Sbjct: 2028 PQSRLPDAKVNTPEDTKVKSENRKEDAQSSE--EESMSTEE 2066
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 1341 (477.1 bits), Expect = 1.3e-138, Sum P(2) = 1.3e-138
Identities = 321/850 (37%), Positives = 490/850 (57%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W + E Q L K++ K RF+ ++ D+ +
Sbjct: 715 EFFVKYKNYSYLHCEWAT--EEQLLKD-KRIQQKIK------RFKLRQAQRAHFFADMEE 765
Query: 75 E-MDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQD 132
E + D + +V+R++ +D +G YLVKW L Y ++TWE E +D A+
Sbjct: 766 EPFNPDYV----EVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAK- 820
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
I+E++ +A+ + + L R +K+D+ ++ G +LR+YQLEGLN+L+ +W
Sbjct: 821 -IEEFEQLQASRPDTRR---LDRPPSNI-WKKIDQSRDYKNGNQLREYQLEGLNWLLFNW 875
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+QS++ L + I GPFL++ PLST++NW +EFR W +
Sbjct: 876 YNRRNCILADEMGLGKTIQSITFLYEIL-LTGIRGPFLIIAPLSTIANWEREFRTWTD-I 933
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNY 308
NV+VY G+ SR++ QQYE Y GR I+ F ++TT+E++L L+ I+W
Sbjct: 934 NVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRC 993
Query: 309 LMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDD 368
+++DEAHRLKN +L L + ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+
Sbjct: 994 VIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSEST 1053
Query: 369 FIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
F+Q + +L + E ++ L L+P +LRR+ +DVEK L PK E I+ VE++ +QK+YY+
Sbjct: 1054 FMQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYR 1111
Query: 429 WILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD--TSINDTSK- 484
ILE+NF L+KG + N +L+N ++EL+KCCNHP+L + A+ G+ + N +
Sbjct: 1112 AILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASD 1171
Query: 485 --LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
L+ +I S+GKLV++DKLL ++ H+VLIFSQMVR LDIL +Y+ +K + ++R+DG
Sbjct: 1172 FHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGR 1231
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1232 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1291
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNE 661
HRIGQ + V +YR VT S E ++ +RA K+ LD V+Q ++ E + +Q E
Sbjct: 1292 CHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKE 1351
Query: 662 LSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKV 721
+ +LR GA E+ DE SK DID ++F
Sbjct: 1352 IEDLLRRGAYGAIMEEE-DEGSK--FCEEDIDQILLRRTKTITIESEGRGSTFAKASFVA 1408
Query: 722 A-NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSY-AEANEPERSN 771
+ N DD +FW +W K EA++ + PR + T+ + A +E +
Sbjct: 1409 SGNRTDISLDDPNFWQKWAKKAEIDIEAISGRNSLVIDTPRIRKQTRPFSATKDELAELS 1468
Query: 772 KRKKKGSE---LQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGN----LSKRDA 823
+ + +G E L+ P +R + + E F V + G S+G L++ D
Sbjct: 1469 EAESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDV 1528
Query: 824 TRFYRAVMKF 833
RA++ +
Sbjct: 1529 EIICRALLAY 1538
Score = 65 (27.9 bits), Expect = 1.3e-138, Sum P(2) = 1.3e-138
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 939 WNQFD-DARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
W FD D LL+G+ HG+ + IR D L +++
Sbjct: 1674 WWDFDADKSLLIGVFKHGYEKYNTIRADPALCFLERV 1710
Score = 49 (22.3 bits), Expect = 6.5e-137, Sum P(2) = 6.5e-137
Identities = 35/181 (19%), Positives = 72/181 (39%)
Query: 819 SKRDATRFYRAVMKFG-----NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAV 873
++R+ FYR V FG ++ Q A + + + + + CR
Sbjct: 1839 TRREEADFYRVVSTFGVVFDPDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVC 1898
Query: 874 EVGSPDPKGPPLLDFFGVSV-KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSN 932
+ S + P + ++ +A+ + R+E L+ + ++ R+ ++ + L + P
Sbjct: 1899 RLPSKEELVDPNIFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLK-LCHPNPDL 1957
Query: 933 --WSKGCGWNQFDDARLLLGIHYHGFGNWE-NIRLDERLGLT---KKIAPVELQHHETFL 986
W + CG + D LL+G HG + +I D L + + ++ H T
Sbjct: 1958 PVWWE-CGPHDRD---LLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTST 2013
Query: 987 P 987
P
Sbjct: 2014 P 2014
Score = 40 (19.1 bits), Expect = 5.8e-136, Sum P(2) = 5.8e-136
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 766 EPERSNKRKKKGSELQEPQ---ERVHKRRK---AEFSVPSVPFIDGASA 808
+P S KKGS+ +E + ER + E SV S P +A
Sbjct: 2733 KPTESGTEDKKGSDSKESEGKTERTESQSSENGGENSVSSSPSTSSTAA 2781
Score = 38 (18.4 bits), Expect = 1.4e-136, Sum P(3) = 1.4e-136
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 754 AARNTKSYAEANEPERSNKRKKKGSELQEPQER---VHKRRKAEFSVPSV 800
A+ ++ S ++ S+ ++ S+ +E Q+R H + E SV S+
Sbjct: 2174 ASSSSSSSTSSSSSSSSSSSEESDSDEEEAQKRESTTHMKAYDEESVASL 2223
Score = 37 (18.1 bits), Expect = 1.4e-136, Sum P(3) = 1.4e-136
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 794 EFSVPSVPFIDGASAQVRDWSYGNLSK-RDATRFYRAVMKFGNQSQISLIARDAG 847
E+S PSVP GA + +SK + R +K ++ + L + G
Sbjct: 2309 EYSDPSVPTPPGAGVKEEHDQSTQMSKVKKHVREKEFTVKIKDEGGLKLTFQKQG 2363
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 1327 (472.2 bits), Expect = 1.7e-138, Sum P(3) = 1.7e-138
Identities = 306/810 (37%), Positives = 465/810 (57%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
E+ +K+K S+LHC+W A Q L K++ K RF+ +++ D+ +
Sbjct: 768 EYFVKYKNYSYLHCEW---ATEQQLEKDKRIQQKIK------RFKIKQAQKAHFFADIEE 818
Query: 75 E-MDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQD 132
+ + D + +V+R++ +D SG YLVKW L Y ++TWE E +D Q
Sbjct: 819 DPFNPDYV----EVDRVLEVSYCEDKDSGEPVVYYLVKWCSLPYEDSTWELMEDVD--QT 872
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
I+E+K +AA +M + + +KL++ ++ LRDYQLEG+N+L+ +W
Sbjct: 873 KIEEFKKLQAAKPHTNRM----ERPPASHWKKLEKSRKYCNENSLRDYQLEGVNWLLFNW 928
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+QS++ L + I GPFL++ PLST++NW +EFR W +
Sbjct: 929 YNRRNCILADEMGLGKTIQSITFLEEIYRTG-IKGPFLIIAPLSTIANWEREFRTWTH-L 986
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNY 308
NVIVY G+ SR++ QQYE Y GR I+ F ++TT+E++L L+ I W
Sbjct: 987 NVIVYHGSVVSRQMLQQYEMYCRDSQGRVIRGAYRFQAVITTFEMILGGCPELNAIDWRC 1046
Query: 309 LMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDD 368
+++DEAHRLKN +L S ++K+L+TGTPLQN+VEEL++LLHFL+ +F S++
Sbjct: 1047 VIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSENT 1106
Query: 369 FIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
F+Q + +L + E ++ L L+P +LRR+ +DVEK L PK E I+ VE++ +QK+YY+
Sbjct: 1107 FMQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYR 1164
Query: 429 WILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD-TSINDTSK-- 484
ILE+NF L KG + N +LLN ++EL+KCCNHP+L + A+ D + +
Sbjct: 1165 AILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYLIKGAEEKIMEDFKEVYSPAAVD 1224
Query: 485 --LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
L+ +I S+GKLV++DKLL ++ H+VLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1225 FHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGR 1284
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1285 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1344
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAE-----GSWRRKKQR 657
HRIGQ + V +YR +T S E ++ +RA K+ LD V+Q ++ G + ++Q
Sbjct: 1345 CHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSLAGGGQMQQQL 1404
Query: 658 KGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXS 717
E+ +LR GA D DE +K DID +
Sbjct: 1405 SKKEIEDLLRRGAYGAIM-DEEDEGNK--FCEEDIDQILQRRTKTITIESEGRGSTFAKA 1461
Query: 718 AFKVA-NFCGAE-DDGSFWSRWIKPEAV----AQAEDALA---PRAARNTKSYAEA-NEP 767
+F + N DD +FW +W K + ++L PR + T+ ++ +E
Sbjct: 1462 SFVASGNRTDISLDDPNFWDKWAKKAEIDMDTVNGRNSLVIDTPRVRKQTRPFSSTKDEL 1521
Query: 768 ERSNKRKKKGSE---LQEPQERVHKRRKAE 794
++ + G + L+ P +R++ + E
Sbjct: 1522 AELSEGESSGDDKPKLRRPHDRLNSYGRTE 1551
Score = 71 (30.1 bits), Expect = 1.7e-138, Sum P(3) = 1.7e-138
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERL 968
W+ D LLLG++ HG+ + IR D +L
Sbjct: 1732 WDMLSDKCLLLGVYKHGYEKYNTIRADPKL 1761
Score = 42 (19.8 bits), Expect = 1.9e-135, Sum P(3) = 1.9e-135
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 739 KPEAV-AQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQER 786
+P+A Q AL P A+ EA P+ K E +EP E+
Sbjct: 2872 QPQAANTQPTPALQPAAS-------EAMAPQPGQSEDKDSDEGEEPDEK 2913
Score = 41 (19.5 bits), Expect = 2.4e-135, Sum P(3) = 2.4e-135
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 783 PQERVHKRRKAEFSVPSVPFIDGASA 808
P+E + R+ + ++P + GASA
Sbjct: 2678 PEEVSRRGRRPKNAMPKAAMVTGASA 2703
Score = 39 (18.8 bits), Expect = 4.0e-135, Sum P(3) = 4.0e-135
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 819 SKRDATRFYRAVMKFG 834
++R+ FYR V FG
Sbjct: 1908 TRREEADFYRVVSTFG 1923
Score = 37 (18.1 bits), Expect = 1.7e-138, Sum P(3) = 1.7e-138
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1040 KRDKKGKPGSAKVNFQTTK 1058
K+D G GSAK + +++
Sbjct: 2913 KKDTSGPEGSAKADSSSSE 2931
Score = 37 (18.1 bits), Expect = 1.7e-138, Sum P(3) = 1.7e-138
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 1055 QTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKW-MEWCEDVMADEIRTLQRLQR 1113
Q +K + H R ++ K E S +Q +K +E E +A + + L RLQ
Sbjct: 2380 QGSKVKKHVADREKEFSVKINNEGSLKLTFQKQGLPLKRPLEGEEGPLAQQ-QYLARLQE 2438
Query: 1114 LQATSD 1119
LQ SD
Sbjct: 2439 LQNASD 2444
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 1340 (476.8 bits), Expect = 1.7e-138, Sum P(2) = 1.7e-138
Identities = 321/851 (37%), Positives = 493/851 (57%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W A Q L K++ K RF+ ++ L D+ +
Sbjct: 717 EFFVKYKNYSYLHCEW---ATEQQLLKDKRIQQKIK------RFKLRQAQRAHFLADMEE 767
Query: 75 E-MDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQD 132
E + D + +V+R++ +D +G YLVKW L Y ++TWE E +D A+
Sbjct: 768 EPFNPDYV----EVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAK- 822
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASL-RKLDEQPEWLRGGKLRDYQLEGLNFLVNS 191
I+E++ +A+ + + +D + A++ +K+D+ ++ G +LR+YQLEGLN+L+ +
Sbjct: 823 -IEEFEHLQASRPDT-RHLD----RPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFN 876
Query: 192 WRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPT 251
W N N ILADEMGLGKT+QS++ L + I GPFL++ PLST++NW +EFR W
Sbjct: 877 WYNRRNCILADEMGLGKTIQSITFLYEIL-LTGIRGPFLIIAPLSTIANWEREFRTWTD- 934
Query: 252 MNVIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWN 307
+NV+VY G+ SR++ QQYE Y GR I+ F ++TT+E++L L+ I+W
Sbjct: 935 INVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWR 994
Query: 308 YLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKD 367
+++DEAHRLKN +L L + ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+
Sbjct: 995 CVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSES 1054
Query: 368 DFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYY 427
F+Q + +L + E ++ L L+P +LRR+ +DVEK L PK E I+ VE++ +QK+YY
Sbjct: 1055 TFMQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYY 1112
Query: 428 KWILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD--TSINDTSK 484
+ ILE+NF L+KG + N +L+N ++EL+KCCNHP+L + A+ G+ + N +
Sbjct: 1113 RAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAAS 1172
Query: 485 ---LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDG 541
L+ +I S+GKLV++DKLL ++ H+VLIFSQMVR LDIL +Y+ +K + ++R+DG
Sbjct: 1173 DFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDG 1232
Query: 542 STKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMS 601
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +
Sbjct: 1233 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1292
Query: 602 RAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGN 660
R HRIGQ + V +YR VT S E ++ +RA K+ LD V+Q ++ E + +Q
Sbjct: 1293 RCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKK 1352
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
E+ +LR GA E+ DE SK DID ++F
Sbjct: 1353 EIEDLLRRGAYGAIMEEE-DEGSK--FCEEDIDQILLRRTKTITIESEGRGSTFAKASFV 1409
Query: 721 VA-NFCGAE-DDGSFWSRWIKPEAV----AQAEDALA---PRAARNTKSY-AEANEPERS 770
+ N DD +FW +W K + ++L PR + T+ + A +E
Sbjct: 1410 ASGNRTDISLDDPNFWQKWAKKAEIDIDAINGRNSLVIDTPRIRKQTRPFSATKDELAEL 1469
Query: 771 NKRKKKGSE---LQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGN----LSKRD 822
++ + +G E L+ P +R + + E F V + G S+G L++ D
Sbjct: 1470 SEAESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHD 1529
Query: 823 ATRFYRAVMKF 833
RA++ +
Sbjct: 1530 VEIICRALLAY 1540
Score = 65 (27.9 bits), Expect = 1.7e-138, Sum P(2) = 1.7e-138
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 939 WNQFD-DARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
W FD D LL+G+ HG+ + IR D L +++
Sbjct: 1676 WWDFDADKSLLIGVFKHGYEKYNTIRADPALCFLERV 1712
Score = 49 (22.3 bits), Expect = 8.4e-137, Sum P(2) = 8.4e-137
Identities = 35/181 (19%), Positives = 72/181 (39%)
Query: 819 SKRDATRFYRAVMKFG-----NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAV 873
++R+ FYR V FG ++ Q A + + + + + CR
Sbjct: 1841 TRREEADFYRVVSTFGVVFDPDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVC 1900
Query: 874 EVGSPDPKGPPLLDFFGVSV-KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSN 932
+ S + P + ++ +A+ + R+E L+ + ++ R+ ++ + L + P
Sbjct: 1901 RLPSKEELVDPNIFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLK-LCHPNPDL 1959
Query: 933 --WSKGCGWNQFDDARLLLGIHYHGFGNWE-NIRLDERLGLT---KKIAPVELQHHETFL 986
W + CG + D LL+G HG + +I D L + + ++ H T
Sbjct: 1960 PVWWE-CGPHDRD---LLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTST 2015
Query: 987 P 987
P
Sbjct: 2016 P 2016
Score = 42 (19.8 bits), Expect = 4.6e-136, Sum P(2) = 4.6e-136
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 766 EPERSNKRKKKGS---ELQEPQERVHKRRK---AEFSVPSVPFIDGASA 808
+P S +KKG+ EL+ +ER + E SV S P +A
Sbjct: 2737 KPTESGTEEKKGNDSKELEGKKERTESQNSENGGENSVSSSPSTSSTAA 2785
Score = 38 (18.4 bits), Expect = 1.2e-135, Sum P(2) = 1.2e-135
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 754 AARNTKSYAEANEPERSNKRKKKGSELQEPQERV---HKRRKAEFSVPSV 800
A+ ++ S + ++ S+ ++ SE +E Q+R H + E SV S+
Sbjct: 2177 ASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGTPHVKAYDEESVASL 2226
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 1321 (470.1 bits), Expect = 5.6e-138, Sum P(3) = 5.6e-138
Identities = 314/815 (38%), Positives = 470/815 (57%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+KG S+LHC+W A+++ L K++ K+ R ++ +S E++D +
Sbjct: 869 EFYVKFKGFSYLHCRW---ADIEELEKDKRIQQKIKRF----RAKQALSTFVTEMDD--E 919
Query: 75 EMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAI 134
+ D + +V+R++ S D +G + YLVKW L Y ++TWE ID Q I
Sbjct: 920 PFNPDYV----EVDRVLDVSESTDENGELVTLYLVKWCSLPYEDSTWELKADID--QVKI 973
Query: 135 DEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRN 194
+E+ E MA + ++ ++R + +K + E+ LR+YQLEG+N+L+ +W N
Sbjct: 974 EEF---ERVMAREPQLKRVERPP-TSDWQKSESSREYKNANALREYQLEGVNWLLFNWYN 1029
Query: 195 DTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNV 254
N ILADEMGLGKT+QS++ L + + I GPFLV+ PLST+ NW +EFR W +NV
Sbjct: 1030 TRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LNV 1087
Query: 255 IVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNYLM 310
+VY G++ASR+ Q YE Y GR IK F+ ++TT+E++L D L + W ++
Sbjct: 1088 VVYHGSQASRKTIQAYEMYYRDTQGRIIKGAYKFHAVITTFEMILTDCPELRNVPWRCVI 1147
Query: 311 VDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFI 370
+DEAHRLKN +L L ++K+L+TGTPLQN+VEEL++LL+FL+ D+F S+ F+
Sbjct: 1148 IDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPSESTFM 1207
Query: 371 QNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWI 430
Q + +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+ I
Sbjct: 1208 QEFGDLKT--EEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNVQKKYYRAI 1265
Query: 431 LERNFHDLNK-GVRG--------NQVSLLNIVVELKKCCNHPFLFESADHGYGGD---TS 478
LE+NF L+K G G N +LLN ++EL+KCCNHP+L A+ + T
Sbjct: 1266 LEKNFAFLSKSGAGGGSGGGGGSNVPNLLNTMMELRKCCNHPYLINGAEEKIMEEFRETH 1325
Query: 479 INDTSK--LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQF 536
D + L+ +I ++GKLV++DKLL +L HRVLIFSQMVR LDIL +Y+ + + +
Sbjct: 1326 PLDQPEFHLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPY 1385
Query: 537 QRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQND 596
+R+DG + LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQND
Sbjct: 1386 ERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQND 1445
Query: 597 LQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKK 655
LQA +R HRIGQ + V IYR +T S E ++ ++A K+ LD V+Q ++ E + +
Sbjct: 1446 LQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVQ 1505
Query: 656 QRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXX 715
Q E+ +LR GA E+ DE SK DID
Sbjct: 1506 QLSKKEIEDLLRKGAYGALMEEE-DEGSK--FCEEDIDQILQRRTQTITIESEGKGSTFA 1562
Query: 716 XSAFKVA-NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSYAEANE 766
++F A N +D FW +W K +A+ + + PR + T+ Y+ E
Sbjct: 1563 KASFVSAGNRTDISLEDPDFWQKWAKKAELDLDAINGRNNLVIDTPRVRKQTRHYSSMKE 1622
Query: 767 PE-------RSNKRKKKGSELQEPQERVHKRRKAE 794
+ S+ K + + PQ+R ++E
Sbjct: 1623 DDLMEYSELESDSEDKPIQKPRRPQDRTQGYPRSE 1657
Score = 61 (26.5 bits), Expect = 5.6e-138, Sum P(3) = 5.6e-138
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
P++W W+ D LL+G+ HG+ + ++R D L +++
Sbjct: 1834 PTDW-----WDLDADKSLLIGVFKHGYEKYNSMRADPTLCFLERV 1873
Score = 50 (22.7 bits), Expect = 5.6e-138, Sum P(3) = 5.6e-138
Identities = 27/100 (27%), Positives = 44/100 (44%)
Query: 1226 GPSHINGSASGSIDNDLNFSTFN-RHAERQKG--HKNVSTYQMTEPIHKG-IDPKKFEAW 1281
G I SA+ D+ F R R++ ++ VST+ + +H+ D +F A+
Sbjct: 2025 GSPFIPDSAALLADSAAYFKERRQRWTRREEADFYRVVSTFGVVYDVHRQCFDWSQFRAF 2084
Query: 1282 KRRRRAETD-----MYSQAQPMLQR----PMNNGTRLPDP 1312
R + +TD Y M +R P+ + T LPDP
Sbjct: 2085 ARLDK-KTDESLEKYYCSFVAMCKRVCRMPLKSETELPDP 2123
Score = 49 (22.3 bits), Expect = 1.3e-134, Sum P(2) = 1.3e-134
Identities = 35/144 (24%), Positives = 55/144 (38%)
Query: 746 AEDALAPRAARNTKSYAEANE---PERSNKRKKKGSELQEPQ-ERVHKR-RKAEFSVPSV 800
A A A A +T+ AE+ E P+ + K +G E +E Q E+ + A+ + +
Sbjct: 2924 AAAATATNGASSTEQ-AESEENSKPKTDEETKGEGDEKEEKQAEKSSETVESADATGDAA 2982
Query: 801 PFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG-AVATAPQEVVV 859
A+A S G L+ F + M G + GG A+ PQ +
Sbjct: 2983 ALNAAAAAAAAGMSTGTLAFNP---FLLSTMAPGLFYPSMFLPPSLGGLAIPGFPQASLA 3039
Query: 860 ELFDILIDGCREAVEVGSPDPKGP 883
+L + G A KGP
Sbjct: 3040 DL-QSAVSGALGATGEDKESDKGP 3062
Score = 42 (19.8 bits), Expect = 5.7e-136, Sum P(3) = 5.7e-136
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 1085 YEQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLPKEK 1125
Y KE ME+ E E + +Q+ +R Q + P+ +
Sbjct: 1617 YSSMKEDDLMEYSELESDSEDKPIQKPRRPQDRTQGYPRSE 1657
Score = 41 (19.5 bits), Expect = 9.2e-134, Sum P(2) = 9.2e-134
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 795 FSVPSVPFIDGASAQVRDWS-Y-----GNLSKRDATRFYRAVMKFG 834
F PFI ++A + D + Y ++R+ FYR V FG
Sbjct: 2021 FMAKGSPFIPDSAALLADSAAYFKERRQRWTRREEADFYRVVSTFG 2066
Score = 38 (18.4 bits), Expect = 1.5e-135, Sum P(3) = 1.5e-135
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 1032 LNMPISRLKRDKKGK 1046
L+ P+ R ++ KKGK
Sbjct: 1737 LSAPVPRGRKGKKGK 1751
Score = 38 (18.4 bits), Expect = 1.9e-133, Sum P(2) = 1.9e-133
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 760 SYAEANEPERSNKRKKKGS-ELQEPQERVHKRRKAE 794
SY+ + + S + K + L P++R +RRK E
Sbjct: 2496 SYSGSEDLTMSPQVNKDDALSLSVPRQRRRRRRKIE 2531
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 1325 (471.5 bits), Expect = 2.9e-137, Sum P(2) = 2.9e-137
Identities = 311/815 (38%), Positives = 477/815 (58%)
Query: 7 SEPDWNEME-FLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSRE 65
+E + E+E FLIKWKG+S++HC+WK+ AEL + K+V AK ++ + +KM S
Sbjct: 1050 NEIEEEEVEQFLIKWKGRSYVHCEWKTAAELLEID--KRV--EAK--IKRFKVKKMSSYI 1103
Query: 66 EIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEY-LVKWKGLSYAEATWEKD 124
E +D D I V+R++ D I++D QE+ L+KWK L Y E TWE
Sbjct: 1104 E---DDEDFNSDFVI------VDRVV-DLITEDDG----QEFVLIKWKSLGYEEVTWEPI 1149
Query: 125 EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
E+I D ++ ++ R+ + + K+ + QR + + +K+ W G LR+YQ EG
Sbjct: 1150 EMIP--ADKVELWRERQ--VIDPAKIREKQRPEPE-EWKKMSTSKVWKNGNSLREYQFEG 1204
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
+++L+ + N N ILADEMGLGKTVQ+++ L + + I GPFLVVVPLST+ NW +E
Sbjct: 1205 VDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYD-YGIHGPFLVVVPLSTIQNWVRE 1263
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYE-FYNDKKVGRP------IKFNTLLTTYEVVLKD 297
F W MN IVY G+ +REV QQYE FY+ + G +K + L+TT+E V+ D
Sbjct: 1264 FETWTD-MNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKIDALITTFETVVSD 1322
Query: 298 KAVLSKIKWNYLMVDEAHRLKNSEAQLYTT-LSEFSTKNKLLITGTPLQNSVEELWALLH 356
L KI W ++DEAHRLKN +L L F ++++L+TGTPLQN+++EL++LL+
Sbjct: 1323 VEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNIDELFSLLN 1382
Query: 357 FLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILR 416
FL +F + F++ + + + ++++ L L+P +LRR+ +DVEKSL PK E I+
Sbjct: 1383 FLHPQQFDNSATFLEQFGSCQT--DDQVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIE 1440
Query: 417 VEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD 476
V++S +QK++Y+ ILERNF L KG + SL+N+++EL+KCCNHPFL A+ D
Sbjct: 1441 VQLSDMQKKFYRAILERNFSHLCKGT--SAPSLMNVMMELRKCCNHPFLINGAEEAIMND 1498
Query: 477 TSI------NDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMS 530
+ +T + +I +SGK+V+++KLL +L + H+VLIFSQMV++LD+L E++
Sbjct: 1499 FRLAHPDWDEETLAHKALIQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLI 1558
Query: 531 YKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSD 590
+ F+R+DG+ + +LR A+D F+ S+ F FLL TRAGGLGINL ADTVIIFDSD
Sbjct: 1559 SMSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSD 1618
Query: 591 WNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK---LNA 647
WNPQNDLQA +R HRIGQ+++V +YR +TS + E ++ ++A K+ LD V+Q L A
Sbjct: 1619 WNPQNDLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKA 1678
Query: 648 EGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXX 707
EG+ KK ++ +L+ GA ++ N ES K DI+
Sbjct: 1679 EGTALSKK-----DVEELLKKGAYGSIMDEEN--ESSK-FNEEDIETILQRRTQTITLEA 1730
Query: 708 XXXXXXXXXSAFKVANFCGAE---DDGSFWSRWI--------KPEAVAQAEDALAPRAAR 756
+ F ++ G + DD FW++W K A + + +
Sbjct: 1731 GQKGSLFAKATFNSSHNKGDDIDIDDPEFWTKWAEKAQVDVEKATATPDGRELIIEEPRK 1790
Query: 757 NTKSYAEANEPERSNKRKKKGSELQEPQERVHKRR 791
TK + E + S+ ++ G+ + E+ +RR
Sbjct: 1791 RTKRFEENKDEGDSDGSEESGNRKRGAAEKRKRRR 1825
Score = 69 (29.3 bits), Expect = 2.9e-137, Sum P(2) = 2.9e-137
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 938 GWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKK 973
GW+ D L+G HG N++ IR+DE L +K
Sbjct: 2005 GWDSDCDKCFLIGCWRHGLDNFDAIRVDENLCFAEK 2040
Score = 41 (19.5 bits), Expect = 2.6e-134, Sum P(2) = 2.6e-134
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 803 IDGASAQVRDWSYGNLS--KRDATRFYRAVMKFGNQSQI 839
+ + V D Y L+ KR+ F R V +G ++ I
Sbjct: 2059 LTSSQKSVHDPVYNKLNWTKREEQEFIRVVRSYGVKTNI 2097
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
Identities = 321/850 (37%), Positives = 490/850 (57%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W + E Q L K++ K RF+ ++ D+ +
Sbjct: 241 EFFVKYKNYSYLHCEWAT--EEQLLKD-KRIQQKIK------RFKLRQAQRAHFFADMEE 291
Query: 75 E-MDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQD 132
E + D + +V+R++ +D +G YLVKW L Y ++TWE E +D A+
Sbjct: 292 EPFNPDYV----EVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAK- 346
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
I+E++ +A+ + + L R +K+D+ ++ G +LR+YQLEGLN+L+ +W
Sbjct: 347 -IEEFEQLQASRPDTRR---LDRPPSNI-WKKIDQSRDYKNGNQLREYQLEGLNWLLFNW 401
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+QS++ L + I GPFL++ PLST++NW +EFR W +
Sbjct: 402 YNRRNCILADEMGLGKTIQSITFLYEIL-LTGIRGPFLIIAPLSTIANWEREFRTWTD-I 459
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNY 308
NV+VY G+ SR++ QQYE Y GR I+ F ++TT+E++L L+ I+W
Sbjct: 460 NVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRC 519
Query: 309 LMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDD 368
+++DEAHRLKN +L L + ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+
Sbjct: 520 VIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSEST 579
Query: 369 FIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
F+Q + +L + E ++ L L+P +LRR+ +DVEK L PK E I+ VE++ +QK+YY+
Sbjct: 580 FMQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYR 637
Query: 429 WILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD--TSINDTSK- 484
ILE+NF L+KG + N +L+N ++EL+KCCNHP+L + A+ G+ + N +
Sbjct: 638 AILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASD 697
Query: 485 --LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
L+ +I S+GKLV++DKLL ++ H+VLIFSQMVR LDIL +Y+ +K + ++R+DG
Sbjct: 698 FHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGR 757
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 758 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 817
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNE 661
HRIGQ + V +YR VT S E ++ +RA K+ LD V+Q ++ E + +Q E
Sbjct: 818 CHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKE 877
Query: 662 LSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKV 721
+ +LR GA E+ DE SK DID ++F
Sbjct: 878 IEDLLRRGAYGAIMEEE-DEGSK--FCEEDIDQILLRRTKTITIESEGRGSTFAKASFVA 934
Query: 722 A-NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSY-AEANEPERSN 771
+ N DD +FW +W K EA++ + PR + T+ + A +E +
Sbjct: 935 SGNRTDISLDDPNFWQKWAKKAEIDIEAISGRNSLVIDTPRIRKQTRPFSATKDELAELS 994
Query: 772 KRKKKGSE---LQEPQERVHKRRKAE-FSVPSVPFIDGASAQVRDWSYGN----LSKRDA 823
+ + +G E L+ P +R + + E F V + G S+G L++ D
Sbjct: 995 EAESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDV 1054
Query: 824 TRFYRAVMKF 833
RA++ +
Sbjct: 1055 EIICRALLAY 1064
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 1344 (478.2 bits), Expect = 1.0e-136, Sum P(2) = 1.0e-136
Identities = 313/798 (39%), Positives = 471/798 (59%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHC+W A Q L K++ K RF+ ++ L D+ +
Sbjct: 714 EFFVKYKNYSYLHCEW---ATEQQLLKDKRIQQKIK------RFKLRQAQRAHFLADMEE 764
Query: 75 E-MDLDIIKQNSQVERIIADRISKDS-SGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQD 132
E + D + +V+RI+ +D +G YLVKW L Y ++TWE E +D A+
Sbjct: 765 EPFNPDYV----EVDRILEVSFCEDKDTGESVVYYLVKWCSLPYEDSTWELKEDVDLAK- 819
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
I+E++ +A+ + + L R +K+D+ E+ G +LR+YQLEGLN+L+ +W
Sbjct: 820 -IEEFEQLQASRPDTRQ---LDRPPSNI-WKKIDQSREYKNGNQLREYQLEGLNWLLFNW 874
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+QS++ L + I GPFL++ PLST++NW +EFR W +
Sbjct: 875 YNRRNCILADEMGLGKTIQSITFL-YEVLLTGIRGPFLIIAPLSTIANWEREFRTWTD-I 932
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNY 308
NV+VY G+ SR++ QQYE Y GR I+ F ++TT+E++L L+ I+W
Sbjct: 933 NVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRC 992
Query: 309 LMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDD 368
+++DEAHRLKN +L L + ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+
Sbjct: 993 VIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSEST 1052
Query: 369 FIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
F+Q + +L + E ++ L L+P +LRR+ +DVEK L PK E I+ VE++ +QK+YY+
Sbjct: 1053 FMQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYR 1110
Query: 429 WILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD--TSINDTSK- 484
ILE+NF L+KG + N +L+N ++EL+KCCNHP+L + A+ G+ + N ++
Sbjct: 1111 AILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYNPSASD 1170
Query: 485 --LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
L+ +I S+GKLV++DKLL ++ H+VLIFSQMVR LDIL +Y+ +K + ++R+DG
Sbjct: 1171 FHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGR 1230
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R
Sbjct: 1231 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1290
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGS-WRRKKQRKGNE 661
HRIGQ + V +YR VT S E ++ +RA K+ LD V+Q ++ S +Q E
Sbjct: 1291 CHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKE 1350
Query: 662 LSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKV 721
+ +LR GA E+ DE SK DID ++F
Sbjct: 1351 IEDLLRRGAYGAIMEEE-DEGSK--FCEEDIDQILLRRTKTITIESEGCGSTFAKASFVA 1407
Query: 722 A-NFCGAE-DDGSFWSRWIKP-----EAVAQAEDAL--APRAARNTKSY-AEANEPERSN 771
+ N DD +FW +W K +A++ + PR + T+ + A +E +
Sbjct: 1408 SGNRTDISLDDPNFWQKWAKKAELDLDAISGRNSLVIDTPRIRKQTRPFSATKDELAELS 1467
Query: 772 KRKKKGSE---LQEPQER 786
+ + +G E L+ P +R
Sbjct: 1468 EAESEGEEKPKLRRPCDR 1485
Score = 44 (20.5 bits), Expect = 1.0e-136, Sum P(2) = 1.0e-136
Identities = 35/181 (19%), Positives = 71/181 (39%)
Query: 819 SKRDATRFYRAVMKFG-----NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAV 873
++R+ FYR V FG ++ Q A + + + + CR
Sbjct: 1840 TRREEADFYRVVSTFGVVFDPDRGQFDWTKFRALARLHKKTDNSLEKYLCAFMAMCRRVC 1899
Query: 874 EVGSPDPKGPPLLDFFGVSV-KANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSN 932
+ S + P + ++ +A+ + R+E L+ + ++ R+ ++ + L + P
Sbjct: 1900 RLPSKEELVDPNIFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLK-LCHPNPDL 1958
Query: 933 --WSKGCGWNQFDDARLLLGIHYHGFGNWE-NIRLDERLGLT---KKIAPVELQHHETFL 986
W + CG + D LL+G HG + +I D L + + ++ H T
Sbjct: 1959 PIWWE-CGSHDRD---LLIGAAKHGVSRTDYHILRDPELSFMAAQRSYSQSKVTHSRTST 2014
Query: 987 P 987
P
Sbjct: 2015 P 2015
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 1226 (436.6 bits), Expect = 1.3e-135, Sum P(3) = 1.3e-135
Identities = 246/544 (45%), Positives = 369/544 (67%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ + + R E +++ RK +R +E P +++ G LRDYQ+ GLN++++ +
Sbjct: 100 SVGDNRHRRTEQEEDEELLSESRKADNVLVR-FEESPSYIKNGTLRDYQIRGLNWMISLY 158
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+PT+
Sbjct: 159 ENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTL 218
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
+ +G + R F D V P +++ +T+YE+V+++K+V K W YL++D
Sbjct: 219 KAVCLIGNKDERAA-----FIRD--VMMPGEWDVCVTSYEMVIREKSVFKKFNWRYLVID 271
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L EF T N+LL+TGTPLQN++ ELW+LL+FL D F S DF +
Sbjct: 272 EAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSASDF-DS 330
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + + +L LH LRP +LRRI +VEKSLPPK E + + +S +Q+++Y IL
Sbjct: 331 WFDTNCLGDQKLVERLHAVLRPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRIL 390
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILS 491
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T DT ++++
Sbjct: 391 MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTT---DT----HLVIN 443
Query: 492 SGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQA 551
SGK+V LDKLL ++ E RVLIFSQM R+LDIL +Y ++GF++ RLDG+T E R QA
Sbjct: 444 SGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRLDGNTPHEAREQA 503
Query: 552 MDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV 611
+D FNAP S F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQ++
Sbjct: 504 IDAFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQRKP 563
Query: 612 VNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKG-NELSAILRFGA 670
V ++R +T +VEE I+ERA+ K+ LD +VIQ +G ++ + G +E+ ++R GA
Sbjct: 564 VKVFRLITDNTVEERIVERAEMKLRLDSIVIQ----QGRLIDQQNKLGKDEMLQMIRHGA 619
Query: 671 EELF 674
+F
Sbjct: 620 THVF 623
Score = 74 (31.1 bits), Expect = 1.3e-135, Sum P(3) = 1.3e-135
Identities = 33/141 (23%), Positives = 63/141 (44%)
Query: 784 QERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIA 843
Q + ++RK + + P P ++ + N +KRD +F +A K+G + I IA
Sbjct: 796 QVQKEEQRKIDEAEPLSPEETEEKEKLLTQGFTNWNKRDFNQFIKANEKYG-RDDIDNIA 854
Query: 844 RDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVE 903
R+ G P+EV+ E + + C E ++ K ++ ++ R+
Sbjct: 855 REVEGKT---PEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ-----RRIS 901
Query: 904 ELQLLAKRISRYEDPIKQFRV 924
+ L +I+RY+ P Q R+
Sbjct: 902 IKKALDVKIARYKAPFHQLRI 922
Score = 64 (27.6 bits), Expect = 1.3e-135, Sum P(3) = 1.3e-135
Identities = 34/148 (22%), Positives = 62/148 (41%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y +KG + + +D L+ +H GF E
Sbjct: 899 RISIKKALDVKIARYKAPFHQLRI-QY----GTNKGKNYTEEEDRFLICMLHKMGFDK-E 952
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM-ELXXXXXXXXXXXXXR 1018
+ E L + AP + + R A L+ R N L+ + E +
Sbjct: 953 YVY--EELRQCVRNAP-QFRFDWFIKSRTAMELQRRCNTLISLIEKENMEIEEKERAEKK 1009
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGK 1046
+ + KG+ + +S K++KK +
Sbjct: 1010 RRTPKGQSAQKR--KAEVSSEKKEKKAR 1035
Score = 45 (20.9 bits), Expect = 2.4e-127, Sum P(2) = 2.4e-127
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 759 KSYAEANEPERSNKRKK--KGSELQEPQERVHKRRK 792
K E E ER+ K+++ KG Q+ + V +K
Sbjct: 995 KENMEIEEKERAEKKRRTPKGQSAQKRKAEVSSEKK 1030
Score = 40 (19.1 bits), Expect = 5.0e-132, Sum P(3) = 5.0e-132
Identities = 10/45 (22%), Positives = 20/45 (44%)
Query: 832 KFGNQSQISLIARDAGGAVATAPQEVVVELFDILID-GCREAVEV 875
K G + +I A A+ E+ E D +++ G ++ E+
Sbjct: 605 KLGKDEMLQMIRHGATHVFASKDSELTDEDIDTILERGAKKTAEM 649
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 1173 (418.0 bits), Expect = 2.1e-135, Sum P(3) = 2.1e-135
Identities = 235/459 (51%), Positives = 320/459 (69%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D+QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ++ L L
Sbjct: 685 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 744
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GP+LV PLST+ NW +EF W P V+ Y G + SR V ++ EF + D
Sbjct: 745 EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 804
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KKV R IKF+ LLT+YE++ D+A+L I+W L+VDEAHRLKN++++ + L+
Sbjct: 805 GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 864
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 865 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 922
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+S +QK+YYK+IL RNF LN GNQVSL
Sbjct: 923 LLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSL 982
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A N + ++ SSGKL++L K+L +L +
Sbjct: 983 LNIMMDLKKCCNHPYLFPVA--AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEG 1040
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 1041 HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST 1100
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQ 608
RAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ
Sbjct: 1101 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 1139
Score = 140 (54.3 bits), Expect = 2.1e-135, Sum P(3) = 2.1e-135
Identities = 55/173 (31%), Positives = 77/173 (44%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKK--VVEDVRFRKMVSREEIE 68
E EF +KW G S+ HC W ELQ L + V+ NY +K + E F S +E
Sbjct: 508 EREFFVKWAGLSYWHCSWVK--ELQ-LELYHTVMYRNYQRKNDMDEPPPF-DYGSGDEDG 563
Query: 69 LNDVSKEMDLDIIKQNSQVER-------IIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
++ K D K + R ++ RI S D G+V YL+KWK L Y +
Sbjct: 564 KSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDV--HYLIKWKDLPYDQ 621
Query: 119 ATWEKDEI-IDFAQDAIDEYKA-REAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
TWE D+I I + + Y RE + E ++ KKGK E+P
Sbjct: 622 CTWEIDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKP 674
Score = 65 (27.9 bits), Expect = 1.7e-127, Sum P(3) = 1.7e-127
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATWEKD 124
K G +E+ VKW GLSY +W K+
Sbjct: 501 KPLEGIPEREFFVKWAGLSYWHCSWVKE 528
Score = 49 (22.3 bits), Expect = 2.1e-135, Sum P(3) = 2.1e-135
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRR 791
R +T++ EPERS +R+++ + P+ +RR
Sbjct: 1176 RVRTSTRAQPARREPERSGQRRRRRP--RPPRSSCRERR 1212
Score = 40 (19.1 bits), Expect = 7.3e-125, Sum P(3) = 7.3e-125
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 112 KGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKK 157
KG S E E++E DF +I R A GK +RKK
Sbjct: 287 KGSSSEED--EREES-DFDSASIHSASVRSECSAALGKKSKRRRKK 329
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 1134 (404.2 bits), Expect = 3.3e-135, Sum P(4) = 3.3e-135
Identities = 250/541 (46%), Positives = 353/541 (65%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D QPE+L GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ+ L L
Sbjct: 681 KYDRQPEYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 740
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GPFLV PLST+ NW +EF W P M V+ YVG + SR + ++ EF + D
Sbjct: 741 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRG 800
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KK R +KF+ LLT+YE++ D A+L I W L+VDEAHRLKN++++ + L+
Sbjct: 801 GKKASRMKKEAAVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLN 860
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+S ++KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + +++ E+++ LH
Sbjct: 861 GYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK--EDQIKKLHD 918
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+SP+QK+YYK+IL RNF LN GNQVSL
Sbjct: 919 MLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSL 978
Query: 450 LNIVVELKKCCNHPFLFE-SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
LN+V++LKKCCNHP+LF +A + D S L R +SGKL++L K+L L E
Sbjct: 979 LNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIR---ASGKLLLLQKMLKNLKEG 1035
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLIFSQM +MLD+L +++ ++G++++R+DG +R +A+D FNAPG++ FCFLLS
Sbjct: 1036 GHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQGFCFLLS 1095
Query: 569 TRAGG--LGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVT-SKSVEE 625
TRAGG L L +++ + DS + + + SRAHR+GQ + VN RFVT S S
Sbjct: 1096 TRAGGPCLWSPLRSSERNV--DSSLSRKTMQKTYSRAHRLGQNKKVNDIRFVTKSISGRS 1153
Query: 626 DILERAKKKMVLDHLVIQKLNAE-GSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESK 684
+ A+K+M+L HLV++ ++ GS KQ EL IL+FG EELFK++ +
Sbjct: 1154 ASSQVAQKEMMLTHLVVRPGGSKTGSM--SKQ----ELDDILKFGTEELFKDEATEGGDN 1207
Query: 685 K 685
K
Sbjct: 1208 K 1208
Score = 163 (62.4 bits), Expect = 3.3e-135, Sum P(4) = 3.3e-135
Identities = 55/172 (31%), Positives = 83/172 (48%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKK--VVE----DVRFRKMVSREE 66
E +F +KW+G S+ HC W S +L+ L NY +K + E D + SR+
Sbjct: 510 ERQFFVKWQGMSYWHCSWVSELQLE-LHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKR 568
Query: 67 IELNDVSKEMDLDIIKQNSQVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEATWEK 123
+ EM+ + + E ++ RI S D GNV YL+KW+ L Y +A+WE
Sbjct: 569 KNKDPKYAEMEERFYRYGIKPEWMMIHRILNHSVDKKGNV--HYLIKWRDLPYDQASWES 626
Query: 124 DEIIDFAQDAIDEYKA-----REAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+++ D QD D YK RE E+G+ +K K +RKL+ PE
Sbjct: 627 EDV-DI-QD-YDLYKQAYWNHRELMRGEEGRP---GKKLKKVKMRKLERPPE 672
Score = 70 (29.7 bits), Expect = 3.3e-135, Sum P(4) = 3.3e-135
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANA 998
W++ D LL GI HG+ W++I+ D R + + E+ + FL R
Sbjct: 1708 WHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEM-NRGNFLEIKNKFLARRFK 1766
Query: 999 LLEMEL 1004
LLE L
Sbjct: 1767 LLEQAL 1772
Score = 60 (26.2 bits), Expect = 2.2e-124, Sum P(4) = 2.2e-124
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATW 121
K G +++ VKW+G+SY +W
Sbjct: 503 KPLEGRPERQFFVKWQGMSYWHCSW 527
Score = 43 (20.2 bits), Expect = 3.3e-135, Sum P(4) = 3.3e-135
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 741 EAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQER 786
E AQ + AP+ A++ + EA+E + + K++ E E + +
Sbjct: 1566 EQCAQPAET-APQEAKSPVNSTEADEKKEEPEVKERTDEPMEVESK 1610
Score = 42 (19.8 bits), Expect = 4.2e-135, Sum P(4) = 4.2e-135
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 740 PEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQER 786
P V E+ + + K E+ EPE+ +E+ P E+
Sbjct: 1523 PAPVPPPEEGIKAEEGASNKEQGESAEPEKELSASANDTEV--PMEQ 1567
Score = 41 (19.5 bits), Expect = 2.0e-07, Sum P(4) = 2.0e-07
Identities = 13/74 (17%), Positives = 35/74 (47%)
Query: 374 KNLSSFNENELANLHMELRPH-ILRRIIKDVEKSLPPKIER-ILRVEMSPLQKQYYKWIL 431
+N + EL ++ L + + ++++ E ++ER I++ E S + Y++ +L
Sbjct: 1229 RNQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEES-VDPDYWEKLL 1287
Query: 432 ERNFHDLNKGVRGN 445
++ + + N
Sbjct: 1288 RHHYEQQQEDLARN 1301
Score = 40 (19.1 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
K + + + D L P R K+ N P ++ + EL Q++ +K
Sbjct: 909 KEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRV--ELSPMQKKYYK 957
Score = 38 (18.4 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 601 SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 642
S+ + +QE+ +I +F T + +++ E K D VI
Sbjct: 1175 SKTGSMSKQELDDILKFGTEELFKDEATEGGDNKEGEDSSVI 1216
Score = 37 (18.1 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 12/56 (21%), Positives = 21/56 (37%)
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERI 414
D D + D +Y S + + R + + D +K LPP + R+
Sbjct: 1321 DRDWQDDQSDNQSDYSVASEEGDEDFDERSEAARRPSRKGLRNDKDKPLPPLLARV 1376
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 1182 (421.1 bits), Expect = 3.9e-134, Sum P(4) = 3.9e-134
Identities = 245/529 (46%), Positives = 353/529 (66%)
Query: 164 KLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 223
+L QP ++G KLRDYQL GLN+L+ + N N ILADEMGLGKT+Q++S+L +L +
Sbjct: 182 RLLTQPACIQG-KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 240
Query: 224 QIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIK 283
I GP +VV P STL NW E R++ P + + ++G R ++ E G K
Sbjct: 241 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE-ELL---VAG---K 293
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 343
F+ +T++E+ +K+K L + W Y+++DEAHR+KN + L T+ FST +LLITGTP
Sbjct: 294 FDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 353
Query: 344 LQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENE--LANLHMELRPHILRRIIK 401
LQN++ ELWALL+FL + F S + F + ++ +S N+ + + LH LRP +LRR+
Sbjct: 354 LQNNLHELWALLNFLLPEVFSSAETFDEWFQ-ISGENDQQEVVQQLHKVLRPFLLRRLKS 412
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCN 461
DVEK LPPK E IL+V MS +QKQYYK +L+++ +N G G + LLNI ++L+KCCN
Sbjct: 413 DVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGG--GERKRLLNIAMQLRKCCN 470
Query: 462 HPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRM 521
HP+LF+ A+ G T + ++ ++GK+V+LDKLL +L + RVLIFSQM R+
Sbjct: 471 HPYLFQGAEPGPPYTTG-------DHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRL 523
Query: 522 LDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATA 581
LDIL +Y+ Y+G+Q+ R+DG+T + R +++ +N PGSE F FLLSTRAGGLGINLATA
Sbjct: 524 LDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATA 583
Query: 582 DTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLV 641
D VI++DSDWNPQ DLQA RAHRIGQ++ V ++RF T ++E ++ERA KK+ LD LV
Sbjct: 584 DVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALV 643
Query: 642 IQKLNAEGSWRRKKQRKGNELSAILRFGAEELF--KEDRNDEESKKRLL 688
IQ +G +K +EL ++R+GAE +F K+ +E R++
Sbjct: 644 IQ----QGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRII 688
Score = 77 (32.2 bits), Expect = 3.9e-134, Sum P(4) = 3.9e-134
Identities = 17/66 (25%), Positives = 38/66 (57%)
Query: 899 INRVEEL-QLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFG 957
I+R +E+ + + K++ RY +P + ++ Y +KG +N+ D ++ +H G+G
Sbjct: 916 ISRKDEIMKAIGKKLDRYRNPWLELKI-QY----GQNKGKLYNEECDRFMICMVHKLGYG 970
Query: 958 NWENIR 963
NW+ ++
Sbjct: 971 NWDELK 976
Score = 55 (24.4 bits), Expect = 3.9e-134, Sum P(4) = 3.9e-134
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 118 EATWEKDEII----DFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQ 168
EA DE++ D +D DE KA E + E+ ++ ++Q+ K + + LD Q
Sbjct: 54 EAPVSDDEVVPVEDDAEEDEEDEEKA-EISKREKARLKEMQKMKKQKIQQILDSQ 107
Score = 47 (21.6 bits), Expect = 3.9e-134, Sum P(4) = 3.9e-134
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 815 YGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG 848
+ S+RD F RA K+G ++ I IA + G
Sbjct: 847 FSTWSRRDFNAFIRACEKYG-RNDIKSIASEMEG 879
Score = 45 (20.9 bits), Expect = 5.7e-127, Sum P(3) = 5.7e-127
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 759 KSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
K E +E ER +++KK S+ P +R R+ E
Sbjct: 1012 KENQEFDERERQARKEKKLSKSATPSKRPSGRQANE 1047
Score = 40 (19.1 bits), Expect = 1.9e-126, Sum P(3) = 1.9e-126
Identities = 20/86 (23%), Positives = 38/86 (44%)
Query: 1063 KPQRVEQPLTKEEGEMSDN--EEVYEQFKEVKWMEW---CEDVMADEIRTLQRLQRLQAT 1117
+P+ V PLT EE E + EE + + + + CE ++I+++ ++
Sbjct: 823 EPEEVGDPLTAEEVEEKELLLEEGFSTWSRRDFNAFIRACEKYGRNDIKSIA--SEMEGK 880
Query: 1118 SDNLPKEKVASVFPSFCWHIPLYSRI 1143
++ E+ A VF + Y RI
Sbjct: 881 TEE-EVERYAQVFQVRYKELNDYDRI 905
Score = 37 (18.1 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 870 REAVEVGSPDPKGPPL 885
++ +EV P+ G PL
Sbjct: 816 KDTIEVDEPEEVGDPL 831
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 1308 (465.5 bits), Expect = 1.8e-133, P = 1.8e-133
Identities = 294/679 (43%), Positives = 419/679 (61%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
E+ IKW G S+ HC+W E Q L L++A V R M EL+D
Sbjct: 112 EYFIKWHGMSYWHCEW--IPEGQML------LHHASMVASFQRRSDMEEPSLEELDDQDG 163
Query: 75 EMDLDIIKQNSQVERIIADRISKDSSG-NVTQEYLVKWKGLSYAEATWEKD-EIIDFAQD 132
+ + + E ++ R+ S N YLVKW+ LSY +++WE++ + I
Sbjct: 164 NLHERFYRYGIKPEWLLVQRVINHSEEPNGGTMYLVKWRELSYNDSSWERESDSIPGLNQ 223
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASL-RKLDEQPEWLR--GGKLRDYQLEGLNFLV 189
AI YK ++ +G+ D R L +K ++QP +L+ G KL +Q+EG+++L
Sbjct: 224 AIALYKKLRSS--NKGRQRD--RPAPTIDLNKKYEDQPVFLKEAGLKLHPFQIEGVSWLR 279
Query: 190 NSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWL 249
SW ILADEMGLGKT+Q+V L L GPFL+ VPLSTL+NW +E W
Sbjct: 280 YSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWA 339
Query: 250 PTMNVIVYVGTRASREVCQQYEFYNDKKVGRPI-------KFNTLLTTYEVVLKDKAVLS 302
P + + YVG + +R V +++E ++ + + KFN +LT+YE + D A L
Sbjct: 340 PELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLG 399
Query: 303 KIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDK 362
I W L+VDEAHRL++++++ + LS++ KLL+TGTPLQN++EEL+ LL+FL K
Sbjct: 400 CIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGK 459
Query: 363 FKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPL 422
F F + ++S E ++ LH L PH+LRR+ DV KS+PPK E I+RVE+S +
Sbjct: 460 FNDLQTFQAEFTDVSK--EEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSM 517
Query: 423 QKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESA-DHGYGGDTSIND 481
QK++YK IL +NF LN+ G SLLNI+++L+KCCNHP+LF SA + + + +
Sbjct: 518 QKKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYE 577
Query: 482 TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDG 541
S L + +SGKL +L K+L +L HRVL+FSQM +ML++L ++ +G+Q+ R+DG
Sbjct: 578 MSSLTK---ASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDG 634
Query: 542 STKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMS 601
S K +LR +A+D FN P SE F FLLSTRAGGLGINLATADTVIIFDSDWNP ND+QA S
Sbjct: 635 SIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFS 694
Query: 602 RAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE 661
RAHR+GQ++ V IYRFVT SVEE I++ AK KM+L HLV++ G + +E
Sbjct: 695 RAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRP--GMGGMTTNFSK--DE 750
Query: 662 LSAILRFGAEELFKEDRND 680
L ILRFG E+LFK+ +++
Sbjct: 751 LEDILRFGTEDLFKDGKSE 769
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 1281 (456.0 bits), Expect = 2.0e-133, Sum P(3) = 2.0e-133
Identities = 288/684 (42%), Positives = 423/684 (61%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
EF +K+K S+LHCQW A +++L K++ K RF+ + + L+++
Sbjct: 818 EFYVKYKNFSYLHCQW---ASVEDLEKDKRIQQKIK------RFKAKQGQNKF-LSEIED 867
Query: 75 EM-DLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDA 133
E+ + D + +V+RI+ S D G YLVKW L Y ++TWE + ID A+
Sbjct: 868 ELFNPDYV----EVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAK-- 921
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I+E+ E M+ + + ++R +K + E+ KLR+YQLEG+N+L+ +W
Sbjct: 922 IEEF---EKLMSREPETERVERPPAD-DWKKSESSREYKNNNKLREYQLEGVNWLLFNWY 977
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
N N ILADEMGLGKT+QS++ L + + I GPFLV+ PLST+ NW +EFR W +N
Sbjct: 978 NMRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLSTIPNWEREFRTWTE-LN 1035
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPIK----FNTLLTTYEVVLKDKAVLSKIKWNYL 309
V+VY G++ASR Q YE Y GR IK F+ ++TT+E++L D L I W +
Sbjct: 1036 VVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCV 1095
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHRLKN +L L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ F
Sbjct: 1096 VIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTF 1155
Query: 370 IQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
+Q + +L + E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+
Sbjct: 1156 MQEFGDLKT--EEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRA 1213
Query: 430 ILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADHGY---GGDTSINDTS-- 483
ILE+NF L+KG + N +LLN ++EL+KCCNHP+L A+ +T D+
Sbjct: 1214 ILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDF 1273
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
+L+ +I ++GKLV++DKLL +L HRVLIFSQMVR LDIL +Y+ + + ++R+DG
Sbjct: 1274 QLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRV 1333
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQ--NDLQAMS 601
+ LR A+D F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNP+ + QA +
Sbjct: 1334 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPKMISSFQAQA 1393
Query: 602 RAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGN 660
R HRIGQ + V IYR +T S E ++ ++A K+ LD V+Q ++ E + +Q
Sbjct: 1394 RCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPNGVQQLSKK 1453
Query: 661 ELSAILRFGAEELFKEDRNDEESK 684
E+ +LR GA D DE SK
Sbjct: 1454 EIEDLLRKGAYGALM-DEEDEGSK 1476
Score = 64 (27.6 bits), Expect = 2.0e-133, Sum P(3) = 2.0e-133
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKI 974
P++W W++ D LL+G+ HG+ + ++R D L +++
Sbjct: 1784 PTDW-----WDKEADKSLLIGVFKHGYEKYNSMRADPALCFLERV 1823
Score = 64 (27.6 bits), Expect = 5.0e-132, Sum P(2) = 5.0e-132
Identities = 42/198 (21%), Positives = 76/198 (38%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFY 827
+RS KR++ E +R +R + E S + + W+ +R+ FY
Sbjct: 1923 QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWT-----RREEADFY 1977
Query: 828 RAVMKFGN-----QSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGS-PDPK 881
R V FG + A + E + + F + CR + S PD +
Sbjct: 1978 RVVSTFGVIFDPVKQHFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPSKPDHE 2037
Query: 882 GPPLLDFFG--VSVKANDLINRVEELQLLAKRISRYEDPIKQFRVL--SYLKPSNWSKGC 937
P L +A+ + R+E L+ + +++ + ++ ++ S P W C
Sbjct: 2038 PPDLASAIEPITEERASRTLYRIELLRKIREQVLHHPQLAERLKLCQPSLDLPEWWE--C 2095
Query: 938 GWNQFDDARLLLGIHYHG 955
G + D LL+G HG
Sbjct: 2096 GRHDRD---LLVGAAKHG 2110
Score = 51 (23.0 bits), Expect = 1.2e-130, Sum P(2) = 1.2e-130
Identities = 40/145 (27%), Positives = 67/145 (46%)
Query: 754 AARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDW 813
AARN E +KGSE ++ +E++ K+E S S P GA ++ +++
Sbjct: 2207 AARNEPKGVEVGADTGPKSISEKGSE-EDEEEKLEDDDKSEES--SQPEA-GAVSRGKNF 2262
Query: 814 ---SYGNLSK-RDATR--FYRAVMKFGNQSQISLIARDAGGAVATAPQE-VVVELFDILI 866
S ++S RD TR FY M+ G+ + L+ + A + P++ V++ D +
Sbjct: 2263 DEESNASMSTARDETRDGFY---MEDGDPAVAQLL-HERTFAFSFWPKDRVMINRLDNI- 2317
Query: 867 DGCREAVEVGSPDPKGPPLLDFFGV 891
C EAV G + DF G+
Sbjct: 2318 --C-EAVLKGKWPVNRRQMFDFQGL 2339
Score = 43 (20.2 bits), Expect = 2.0e-133, Sum P(3) = 2.0e-133
Identities = 20/94 (21%), Positives = 39/94 (41%)
Query: 752 PRAARNTKSYAEANEPE-------RSNKRKKKGSELQEPQERVHKRRKAE-FSVPSVPFI 803
PR + T+ Y+ E E S+ +K ++ + PQ+R ++E F V +
Sbjct: 1558 PRVRKQTRLYSAVKEDELMEFSDLESDSEEKPCAKPRRPQDRSQGYARSECFRVEKNLLV 1617
Query: 804 DGASAQVRDWSYGN----LSKRDATRFYRAVMKF 833
G S+G L+++D R ++ +
Sbjct: 1618 YGWGRWTDILSHGRYKRQLTEQDVETICRTILVY 1651
Score = 40 (19.1 bits), Expect = 1.7e-129, Sum P(2) = 1.7e-129
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKK-GSELQEPQ 784
K A +AE+A P ++ + AE + ++ R+ + G+ EP+
Sbjct: 2168 KTAAEGKAEEAERPEV-KDEEEEAEGSGKDKKRDREAEAGAARNEPK 2213
Score = 38 (18.4 bits), Expect = 2.8e-129, Sum P(2) = 2.8e-129
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 774 KKKGSELQEPQERVHKRRKAE 794
K+ L P++R +RRK E
Sbjct: 2382 KEDALNLSVPRQRRRRRRKIE 2402
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 1190 (424.0 bits), Expect = 3.0e-133, Sum P(5) = 3.0e-133
Identities = 255/643 (39%), Positives = 394/643 (61%)
Query: 9 PDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMV-SREEI 67
P E+ FL +K +S+ +W + +KV+ K+ ++ K V +
Sbjct: 738 PITEEIRFLALFKNKSYRSVRWVT----------EKVIEKEKESPTLIKLLKTVRNTPPP 787
Query: 68 ELNDVSKEMDLDIIKQNSQV-ERIIADRISK-DSSGNVTQEYLVKWKGLSYAEATWEKDE 125
+ + S+ + + V E+I+A + +K S +T YL KWK L + ++TWE +
Sbjct: 788 AIKNESEANPFNYFSPDCTVIEKILAKKETKAGKSKKMTTFYLCKWKTLPHEKSTWEDEN 847
Query: 126 IIDFAQD--AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLE 183
I+ +D AI ++ A + + + K V+ + K + + P++ L+++Q+E
Sbjct: 848 ILITEEDQAAIKQFNANQLLLDQPKKYVN---RPTKLPIFNNELVPKFQDNLSLKEFQVE 904
Query: 184 GLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAK 243
G +L W + + +LADEMGLGKT+QS++ L +L + I GPFLVV PLSTL NW K
Sbjct: 905 GFLWLSYCWYHCRSSLLADEMGLGKTIQSIAFLQYLSQSVGIKGPFLVVAPLSTLGNWHK 964
Query: 244 EFRKWLPTMNVIVYVGTRASREVCQQYEF-YNDKKVGRPIKFNTLLTTYEVVLKDKAVLS 302
E KW M +V+ G++ +R +YEF + D + F LLTTYE ++ D +
Sbjct: 965 EILKWTK-MKTLVFYGSQETRGFISKYEFKHKDTYL-----FEVLLTTYETIMSDHSSFV 1018
Query: 303 KIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDK 362
++ W L++DE HR+KN ++++ + L T++ +++TGTPLQN ++ELW +L+FLD DK
Sbjct: 1019 RVPWRALILDEGHRIKNDKSKVLSKLKSIKTEHSIILTGTPLQNDMKELWTMLNFLDPDK 1078
Query: 363 FKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPL 422
F S +F+ Y +L E++++ LH L P++LRR+ +DVE S+P K E +++VE+S
Sbjct: 1079 FNSCQEFLDEYSDLKE--ESQVSKLHQLLSPYLLRRMKEDVELSIPIKEETVIQVELSST 1136
Query: 423 QKQYYKWILERNFHDLNKGVRG--NQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSIN 480
QK YY+ ILERN L++G++ N L NI+++++K CNHPFL A+ I
Sbjct: 1137 QKTYYRAILERNREFLSRGIKQKTNLPKLSNIMIQIRKVCNHPFLIPGAEESIVKQEKIA 1196
Query: 481 DTSKL-ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRL 539
+L E ++ SS KLV++DKLL RL H+VLIFSQMV L+IL +Y+ Y+ + ++RL
Sbjct: 1197 GDEELGELLVKSSSKLVLVDKLLQRLKAEGHQVLIFSQMVESLNILEDYLQYREYTYERL 1256
Query: 540 DGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA 599
DGS K+E+R ++D F G+ F FLLSTRAGG+GINL TADTVI+FDSDWNPQ+DLQA
Sbjct: 1257 DGSIKSEVRQASIDRFQDKGANRFVFLLSTRAGGVGINLTTADTVILFDSDWNPQSDLQA 1316
Query: 600 MSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 642
+R HRIGQ V +YR +T + EE + E A KK++LDH+V+
Sbjct: 1317 QARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKLLLDHIVL 1359
Score = 92 (37.4 bits), Expect = 3.0e-133, Sum P(5) = 3.0e-133
Identities = 26/113 (23%), Positives = 54/113 (47%)
Query: 887 DFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGC--GWNQFDD 944
DF S + ++ R+ +++ + + +++Y + + Y+ S+G W Q +D
Sbjct: 2165 DFPSFSTRVQTVLTRLVQMRAIKQLVTKYGKQLTNLSI-PYI-----SRGPIPTWTQEND 2218
Query: 945 ARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERAN 997
LL+G++ HG+G + I D L L ++ V+ TF P + ++ N
Sbjct: 2219 KSLLVGVYKHGYGKYPEIFFDPELDL---LSNVKRGQPNTFSPNPTSNNDQNN 2268
Score = 69 (29.3 bits), Expect = 3.0e-133, Sum P(5) = 3.0e-133
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 660 NELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAF 719
+++S +L++GA LF E DE +K+ + ++ D S F
Sbjct: 1423 SQISQMLKYGAAYLFAET-TDEANKQDKIMINEDIDKILERSTTIQFDEKNSKPSSLSGF 1481
Query: 720 KVANFCGAE-------DDGSFWSRWIKPE--AVAQAEDALAPRAA 755
A F +E +D +FW + + P+ V Q E+ LA +A
Sbjct: 1482 SKATFASSETDMNVDMNDENFWEK-VLPDYKTVKQLEEKLASGSA 1525
Score = 47 (21.6 bits), Expect = 3.0e-133, Sum P(5) = 3.0e-133
Identities = 16/76 (21%), Positives = 32/76 (42%)
Query: 1195 NYVSTFSNLSGEKLHQIYSKLKQERQEEAGIGPSHINGSASGSIDNDLNFS--TFNRHAE 1252
NY + SN + + + G ++ N + S+D +N + + +RH
Sbjct: 2474 NYSNNSSNNNNNNNNNSFFGNNNSNNNNPFFGNNNNNNNKLPSLDRMINKNDNSSHRHHS 2533
Query: 1253 RQKGHKNVSTYQMTEP 1268
K K+ S+ Q ++P
Sbjct: 2534 SSKHSKSQSSNQSSKP 2549
Score = 40 (19.1 bits), Expect = 3.0e-133, Sum P(5) = 3.0e-133
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 755 ARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSV 800
+ + ++ + E E+S + K ++ ++ E+V K K E S V
Sbjct: 1870 SNDKETQIKVEEKEKSTESKSSSNDEKDVCEKVEKGEK-EISSDKV 1914
Score = 38 (18.4 bits), Expect = 2.6e-132, Sum P(5) = 2.6e-132
Identities = 6/23 (26%), Positives = 18/23 (78%)
Query: 1202 NLSGEKLHQIY--SKLKQERQEE 1222
+++ +KLHQ+ ++K+++++E
Sbjct: 2339 HMAQQKLHQLQLQQQMKEQKEKE 2361
Score = 38 (18.4 bits), Expect = 1.3e-127, Sum P(5) = 1.3e-127
Identities = 14/75 (18%), Positives = 31/75 (41%)
Query: 1021 SKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSD 1080
SK + ++ + + + D+K K + + +K ++ + + KE S
Sbjct: 1951 SKDDEKSKDDEKSKDDEKSQDDEKSKDDEKSKDDEKSKLEENQDESTPMEVDKESKSTSS 2010
Query: 1081 NEEVYEQFKEVKWME 1095
+E+ + KE K E
Sbjct: 2011 SEKQSIEIKEEKESE 2025
Score = 38 (18.4 bits), Expect = 7.5e-126, Sum P(4) = 7.5e-126
Identities = 6/29 (20%), Positives = 15/29 (51%)
Query: 763 EANEPERSNKRKKKGSELQEPQERVHKRR 791
+ N+P + N+ ++ + Q HK++
Sbjct: 2365 QQNQPNQQNQPGQQNQQTQHGHSGSHKQK 2393
Score = 37 (18.1 bits), Expect = 6.7e-130, Sum P(5) = 6.7e-130
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 627 ILERAK-KKMVLDHLVIQKLNAEGSWRRKKQRKGNELSA 664
+LE+ + +K V+ VIQ S +KK++ N L A
Sbjct: 1589 LLEKPRTRKRVIPE-VIQSQQHHHSDNKKKKQSNNILLA 1626
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 1232 (438.7 bits), Expect = 6.0e-133, Sum P(2) = 6.0e-133
Identities = 277/695 (39%), Positives = 415/695 (59%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ +Y+ R E +++ K R +E P +++ GKLRDYQ+ GLN+L++ +
Sbjct: 122 SVGDYRHRRTEQEEDEELLTESSKTTNVCTR-FEESPSYVKWGKLRDYQVRGLNWLISLY 180
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++S+LG++++ + IPGP +V+VP STL NW EF++W+PT+
Sbjct: 181 ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTL 240
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
+ +G + R F D V P +++ +T+YE+++K+K+V K W YL++D
Sbjct: 241 RAVCLIGDKDQRAA-----FVRD--VLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVID 293
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L + EF T N+LL+TGTPLQN++ ELWALL+FL D F S +DF
Sbjct: 294 EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSW 353
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + +L LHM LRP +LRRI DVEKSLPPK E + V +S +Q+++Y IL
Sbjct: 354 FDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL 413
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILS 491
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T ++ ++ +
Sbjct: 414 MKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH-------LVTN 466
Query: 492 SGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQA 551
SGK+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++ +++ RLDG T + R +
Sbjct: 467 SGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQAS 526
Query: 552 MDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV 611
++ +N PGS F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQ +
Sbjct: 527 INAYNEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKT 586
Query: 612 VNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAE 671
V ++RF+T +VEE I+ERA+ K+ LD +VIQ+ K + +E+ ++R GA
Sbjct: 587 VRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGK--DEMLQMIRHGAT 644
Query: 672 ELF--KEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVANFCGA-- 727
+F KE +E +L + V NF G
Sbjct: 645 HVFASKESEITDEDIDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY 704
Query: 728 -EDDGSFWSRWIKP---EAVAQ-AEDALAPRAAR--NTKSYAEANEPERSNKRK-----K 775
E ++ WI+P E A A DA A R K+ P++ N +
Sbjct: 705 REKQKMAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP 764
Query: 776 KGSELQEPQERVHKRRKAEFSVPSVPFI-DGASAQ 809
+ EL E +E ++ R+ + VP P + + A AQ
Sbjct: 765 RLFELLE-KEILYYRKTIGYKVPRNPDLPNAAQAQ 798
Score = 92 (37.4 bits), Expect = 6.0e-133, Sum P(2) = 6.0e-133
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 815 YGNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVE 874
+ N +KRD +F +A K+G + I IAR+ G P+EV+ E + + C E +
Sbjct: 827 FTNWNKRDFNQFIKANEKWG-RDDIENIAREVEGKT---PEEVI-EYSAVFWERCNELQD 881
Query: 875 VGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWS 934
+ K ++ ++ R+ + L +I RY+ P Q R+ SY +
Sbjct: 882 I----EKIMAQIERGEARIQ-----RRISIKKALDTKIGRYKAPFHQLRI-SY----GTN 927
Query: 935 KGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPR--APNL 992
KG + + +D L+ +H GF EN+ DE L + I + FL A L
Sbjct: 928 KGKNYTEEEDRFLICMLHKLGFDK-ENV-YDE---LRQCIRNSPQFRFDWFLKSRTAMEL 982
Query: 993 KERANALLEM 1002
+ R N L+ +
Sbjct: 983 QRRCNTLITL 992
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 1229 (437.7 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 253/533 (47%), Positives = 362/533 (67%)
Query: 165 LDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ 224
+ E P +++ GKLRDYQ++GLN+L++ N + ILADEMGLGKT+Q++S LG+L+ +Q
Sbjct: 172 VSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQ 231
Query: 225 IPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKF 284
I GPFL++VP STL NW +EF KW P +NV+V G + +R + + +F
Sbjct: 232 IEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIV-------RNIILEARF 284
Query: 285 NTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPL 344
+ L+T+YE+V+++K L ++ W Y+++DEAHR+KN ++ L + F +KN+LLITGTPL
Sbjct: 285 DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPL 344
Query: 345 QNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELA--NLHMELRPHILRRIIKD 402
QN++ ELWALL+FL D F + F + ++ +S + E+ LH L P +LRR+ D
Sbjct: 345 QNNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKAD 404
Query: 403 VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGV--RGNQVSLLNIVVELKKCC 460
VEKSL PKIE + V M+ +Q Q+YK +LE++ +N V R + LLNIV++L+KCC
Sbjct: 405 VEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCC 464
Query: 461 NHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVR 520
NHP+LFE A+ G T E +I +SGK++ILDKLL RL E RVLIFSQM R
Sbjct: 465 NHPYLFEGAEPGPPYTTD-------EHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSR 517
Query: 521 MLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLAT 580
+LDIL +Y ++ F++ R+DGST E R +A+D +N P SE F FLL+TRAGGLGINL T
Sbjct: 518 LLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVT 577
Query: 581 ADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHL 640
ADTVI+FDSDWNPQ DLQAM RAHRIGQ++ V++YRFVT ++EE ++ERA +K+ LD L
Sbjct: 578 ADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQL 637
Query: 641 VIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDID 693
VIQ+ G ++L +++FGA+ +F ++++ K + DID
Sbjct: 638 VIQQ--GTGKKTASLGNSKDDLLDMIQFGAKNMF-----EKKASKVTVDADID 683
Score = 65 (27.9 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 756 RNTKSYAEANEPERSNKRKKKGSE-LQEPQERVHKRRKAEFSVPSVPFIDGASAQ-VRDW 813
RN S AE E E N +G + +E + R+ + ++ S P D Q +
Sbjct: 827 RNEGSDAEEEEGEYKNAANTEGHKGHEELKRRIEEEQEKINSAPDFTQEDELRKQELISK 886
Query: 814 SYGNLSKRDATRFYRAVMKFG 834
++ N +KRD F A K+G
Sbjct: 887 AFTNWNKRDFMAFINACAKYG 907
Score = 42 (19.8 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 25/119 (21%), Positives = 51/119 (42%)
Query: 1111 LQRLQATSDNLPKEKVASVFPSFCWHIPLYSRIKHLTSL-LFFHFIQVLSKIRNYLQ--- 1166
++ ++ + D+ E+V V+ W R+K + + H +++ K L+
Sbjct: 911 MENIKKSIDSKTPEEV-EVYAKIFWE-----RLKEINGWEKYLHNVELGEKKNEKLKFQE 964
Query: 1167 -LIGRRIDQIVLE-HEEELYKQDRMTMRLWN-----YVSTFSNLSGEKLHQIYSKLKQE 1218
L+ ++I+Q HE + R +N ++ N G + ++Y KLKQE
Sbjct: 965 TLLRQKIEQCKHPLHELIIQYPPNNARRTYNTLEDKFLLLAVNKYGLRADKLYEKLKQE 1023
Score = 39 (18.8 bits), Expect = 4.9e-127, Sum P(2) = 4.9e-127
Identities = 8/39 (20%), Positives = 18/39 (46%)
Query: 763 EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVP 801
E +P+ + K++ + S +E +VP++P
Sbjct: 1058 EYEQPDANKKKRSRTSATREDTPLSQNESTRASTVPNLP 1096
Score = 38 (18.4 bits), Expect = 2.8e-129, Sum P(3) = 2.8e-129
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 1201 SNLSGEKLHQIYSKLKQERQEEAGIGP 1227
+N G K H+ + +E QE+ P
Sbjct: 844 ANTEGHKGHEELKRRIEEEQEKINSAP 870
Score = 37 (18.1 bits), Expect = 1.0e-129, Sum P(3) = 1.0e-129
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 757 NTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSV 797
N +Y E N K K E P R +R + +SV
Sbjct: 716 NQSAY-EWNGKSFQKKSNDKVVEWINPSRRERRREQTTYSV 755
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 1242 (442.3 bits), Expect = 1.6e-132, Sum P(2) = 1.6e-132
Identities = 250/556 (44%), Positives = 372/556 (66%)
Query: 136 EYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRND 195
+Y+ R E +++ RK +R +E P +++GG LRDYQ+ GLN++++ + N
Sbjct: 67 DYRHRRTEQEEDEELLSESRKTSNVCIR-FEESPSYVKGGTLRDYQVRGLNWMISLYENG 125
Query: 196 TNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVI 255
N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++ +
Sbjct: 126 VNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAV 185
Query: 256 VYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAH 315
+G + +R F D V P +++ +T+YE+V+K+K+V K W YL++DEAH
Sbjct: 186 CLIGDKDARAA-----FIRD--VMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAH 238
Query: 316 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKN 375
R+KN +++L + EF T N+LL+TGTPLQN++ ELWALL+FL D F S DDF +
Sbjct: 239 RIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT 298
Query: 376 LSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 434
+ + +L LH L+P +LRRI +VEKSLPPK E + + +S +Q+++Y IL ++
Sbjct: 299 KNCLGDQKLVERLHAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKD 358
Query: 435 FHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGK 494
LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T DT +I +SGK
Sbjct: 359 IDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTT---DT----HLITNSGK 411
Query: 495 LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDH 554
+++LDKLL +L E RVL+FSQM R+LDIL +Y ++G+++ RLDG T E R +A+D
Sbjct: 412 MLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDT 471
Query: 555 FNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNI 614
FNAP S F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQ++ V +
Sbjct: 472 FNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRV 531
Query: 615 YRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELF 674
+R +T +VEE I+ERA+ K+ LD +VIQ+ K + +E+ ++R GA +F
Sbjct: 532 FRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAK--DEMLQMIRHGATHVF 589
Query: 675 --KEDRNDEESKKRLL 688
K+ EE +L
Sbjct: 590 ASKDSELTEEDITTIL 605
Score = 78 (32.5 bits), Expect = 1.6e-132, Sum P(2) = 1.6e-132
Identities = 32/143 (22%), Positives = 65/143 (45%)
Query: 784 QERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIA 843
Q + +++K + S+P P ++ + N +KRD +F +A K+G + I IA
Sbjct: 738 QVQKEEQKKIDESMPLNPEETEEKEKLLTQGFTNWNKRDFNQFIKANEKYG-RDDIDNIA 796
Query: 844 RDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKAND--LINR 901
R+ G +P+EV+ E + + C E ++ + ++ + + R
Sbjct: 797 REVEGK---SPEEVI-EYSAVFWERCNELQDI-----------ERIMAQIERGEARIQRR 841
Query: 902 VEELQLLAKRISRYEDPIKQFRV 924
+ + L +I+RY+ P Q R+
Sbjct: 842 ISIKKALDAKIARYKAPFHQLRI 864
Score = 61 (26.5 bits), Expect = 9.9e-131, Sum P(2) = 9.9e-131
Identities = 27/103 (26%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y +KG + + +D L+ +H GF E
Sbjct: 841 RISIKKALDAKIARYKAPFHQLRI-QY----GTNKGKNYTEEEDRFLICMLHKMGFDK-E 894
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 895 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 934
Score = 46 (21.3 bits), Expect = 3.8e-129, Sum P(2) = 3.8e-129
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 759 KSYAEANEPERSNKRKKKGSELQEPQER 786
K E E ER+ K KK+G+++ Q+R
Sbjct: 937 KENMEIEEKERAEK-KKRGAKVTASQKR 963
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 1246 (443.7 bits), Expect = 2.0e-132, Sum P(2) = 2.0e-132
Identities = 252/554 (45%), Positives = 372/554 (67%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ +Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ +
Sbjct: 144 SVGDYRHRRTEQEEDEELLSESRKTSNVCVR-FEVSPSYVKGGPLRDYQIRGLNWLISLY 202
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++
Sbjct: 203 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSL 262
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
VI +VG + R F D+ + P +++ +T+YE+V+K+K+V K W YL++D
Sbjct: 263 RVICFVGDKDVRAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVID 315
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L + EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF
Sbjct: 316 EAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSW 375
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q+++Y IL
Sbjct: 376 FDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL 435
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILS 491
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T E I+ +
Sbjct: 436 MKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD-------EHIVGN 488
Query: 492 SGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQA 551
SGK+V LDKLL R+ E RVLIFSQM R+LDIL +Y ++G+++ RLDG T E R +A
Sbjct: 489 SGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEA 548
Query: 552 MDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV 611
+D FNAP S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ DLQAM RAHRIGQ++
Sbjct: 549 IDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKP 608
Query: 612 VNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAE 671
V ++R +T +VEE I+ERA+ K+ LD +VIQ+ K ++ E+ ++R GA
Sbjct: 609 VRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKE--EMLQMIRHGAT 666
Query: 672 ELF--KEDR-NDEE 682
+F KE DE+
Sbjct: 667 HVFACKESELTDED 680
Score = 73 (30.8 bits), Expect = 2.0e-132, Sum P(2) = 2.0e-132
Identities = 33/150 (22%), Positives = 67/150 (44%)
Query: 776 KGSELQEPQ-ERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFG 834
+ E+ P + +++K + + P P ++ + N +KRD +F +A K+G
Sbjct: 809 RNPEIPNPAIAQREEQKKIDGAEPLTPQETEEKDKLLTQGFTNWTKRDFNQFIKANEKYG 868
Query: 835 NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVK 894
+ I IAR+ G +P+EV+ E + + C E ++ K ++ ++
Sbjct: 869 -RDDIDNIAREVEGK---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ 919
Query: 895 ANDLINRVEELQLLAKRISRYEDPIKQFRV 924
R+ + L +I+RY+ P Q R+
Sbjct: 920 -----RRISIKKALDAKIARYKAPFHQLRI 944
Score = 64 (27.6 bits), Expect = 1.8e-131, Sum P(2) = 1.8e-131
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 921 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 974
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 975 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 1014
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 1242 (442.3 bits), Expect = 5.3e-132, Sum P(2) = 5.3e-132
Identities = 251/556 (45%), Positives = 372/556 (66%)
Query: 136 EYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRND 195
+Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ + N
Sbjct: 146 DYRHRRTEQEEDEELLSESRKTSNVCVR-FEVSPSYVKGGPLRDYQIRGLNWLISLYENG 204
Query: 196 TNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVI 255
N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++ VI
Sbjct: 205 VNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVI 264
Query: 256 VYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAH 315
+VG + +R F D+ + P +++ +T+YE+V+K+K+V K W YL++DEAH
Sbjct: 265 CFVGDKDARAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAH 317
Query: 316 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKN 375
R+KN +++L + EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF +
Sbjct: 318 RIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT 377
Query: 376 LSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 434
+ + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q+++Y IL ++
Sbjct: 378 KNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKD 437
Query: 435 FHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGK 494
LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T E I+ +SGK
Sbjct: 438 IDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD-------EHIVSNSGK 490
Query: 495 LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDH 554
+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++G+++ RLDG T E R +A++
Sbjct: 491 MVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEA 550
Query: 555 FNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNI 614
FN P S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ DLQAM RAHRIGQ++ V +
Sbjct: 551 FNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRV 610
Query: 615 YRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELF 674
+R +T +VEE I+ERA+ K+ LD +VIQ+ K ++ E+ ++R GA +F
Sbjct: 611 FRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKE--EMLQMIRHGATHVF 668
Query: 675 --KEDRNDEESKKRLL 688
KE +E LL
Sbjct: 669 ASKESELTDEDITTLL 684
Score = 73 (30.8 bits), Expect = 5.3e-132, Sum P(2) = 5.3e-132
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 789 KRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG 848
+++K + + P P ++ + N +KRD +F +A K+G + I IAR+ G
Sbjct: 822 EQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYG-RDDIDNIAREVEG 880
Query: 849 AVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLL 908
+P+EV+ E + + C E ++ K ++ ++ R+ + L
Sbjct: 881 K---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ-----RRISIKKAL 927
Query: 909 AKRISRYEDPIKQFRV 924
+I+RY+ P Q R+
Sbjct: 928 DAKIARYKAPFHQLRI 943
Score = 64 (27.6 bits), Expect = 4.8e-131, Sum P(2) = 4.8e-131
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 920 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 973
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 974 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 1013
Score = 37 (18.1 bits), Expect = 3.4e-128, Sum P(2) = 3.4e-128
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 759 KSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPS 799
K E E ER+ K+K+ + P + +RKAE + S
Sbjct: 1016 KENMEIEERERAEKKKRA---TKTPMSQ---KRKAESATES 1050
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 1223 (435.6 bits), Expect = 5.3e-132, Sum P(2) = 5.3e-132
Identities = 276/695 (39%), Positives = 414/695 (59%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ +Y+ R E +++ K R ++ P +++ GKLRDYQ+ GLN+L++ +
Sbjct: 136 SVGDYRHRRTEQEEDEELLTESSKATNVCTR-FEDSPSYVKWGKLRDYQVRGLNWLISLY 194
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++S+LG++++ + IPGP +V+VP STL NW EF+KW+PT+
Sbjct: 195 ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTL 254
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
+ +G + R F D V P +++ +T+YE+++K+K+V K W YL++D
Sbjct: 255 RSVCLIGDKEQRAA-----FVRD--VLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVID 307
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L + EF T N+LL+TGTPLQN++ ELW+LL+FL D F S DDF
Sbjct: 308 EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSW 367
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + +L LHM LRP +LRRI DVEKSLPPK E + V +S +Q+++Y IL
Sbjct: 368 FDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL 427
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILS 491
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T ++ ++ +
Sbjct: 428 MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH-------LVTN 480
Query: 492 SGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQA 551
SGK+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++ +++ RLDG T + R +
Sbjct: 481 SGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDS 540
Query: 552 MDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV 611
++ +N P S F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQ +
Sbjct: 541 INAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKT 600
Query: 612 VNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAE 671
V ++RF+T +VEE I+ERA+ K+ LD +VIQ+ K + +E+ ++R GA
Sbjct: 601 VRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGK--DEMLQMIRHGAT 658
Query: 672 ELF--KEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVANFCGA-- 727
+F KE +E +L + V NF G
Sbjct: 659 HVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY 718
Query: 728 -EDDGSFWSRWIKP---EAVAQ-AEDALAPRAAR--NTKSYAEANEPERSNKRK-----K 775
E ++ WI+P E A A DA A R K+ P++ N +
Sbjct: 719 REKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP 778
Query: 776 KGSELQEPQERVHKRRKAEFSVPSVPFI-DGASAQ 809
+ EL E +E ++ R+ + VP P + + A AQ
Sbjct: 779 RLFELLE-KEILYYRKTIGYKVPRSPDLPNAAQAQ 812
Score = 92 (37.4 bits), Expect = 5.3e-132, Sum P(2) = 5.3e-132
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 815 YGNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVE 874
+ N +KRD +F +A K+G + I IAR+ G P+EV+ E + + C E +
Sbjct: 841 FTNWNKRDFNQFIKANEKWG-RDDIENIAREVEGKT---PEEVI-EYSAVFWERCNELQD 895
Query: 875 VGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWS 934
+ K ++ ++ R+ + L +I RY+ P Q R+ SY +
Sbjct: 896 I----EKIMAQIERGEARIQ-----RRISIKKALDTKIGRYKAPFHQLRI-SY----GTN 941
Query: 935 KGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPR--APNL 992
KG + + +D L+ +H GF EN+ DE L + I + FL A L
Sbjct: 942 KGKNYTEEEDRFLICMLHKLGFDK-ENV-YDE---LRQCIRNSPQFRFDWFLKSRTAMEL 996
Query: 993 KERANALLEM 1002
+ R N L+ +
Sbjct: 997 QRRCNTLITL 1006
Score = 37 (18.1 bits), Expect = 3.4e-126, Sum P(2) = 3.4e-126
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 986 LPRAPNLKERANALLEMEL 1004
+PR+P+L A A E +L
Sbjct: 799 VPRSPDLPNAAQAQKEEQL 817
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 1174 (418.3 bits), Expect = 5.3e-132, Sum P(2) = 5.3e-132
Identities = 235/461 (50%), Positives = 321/461 (69%)
Query: 164 KLDEQPEWL--RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN 221
K D+QP ++ GG L YQLEGLN+L SW T+ ILADEMGLGKTVQ++ L L
Sbjct: 659 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 718
Query: 222 AQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEF-YND----- 275
GP+LV PLST+ NW +EF W P V+ Y G + SR V ++ EF + D
Sbjct: 719 EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 778
Query: 276 -KKVGR-----PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
KKV R IKF+ LLT+YE++ D+A+L I+W L+VDEAHRLKN++++ + L+
Sbjct: 779 GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 838
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+ KLL+TGTPLQN++EEL+ LL+FL ++F + + F++ + ++S E+++ LH
Sbjct: 839 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK--EDQIKKLHD 896
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
L PH+LRR+ DV K++P K E I+RVE+S +QK+YYK+IL RNF LN GNQVSL
Sbjct: 897 LLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSL 956
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
LNI+++LKKCCNHP+LF A N + ++ SSGKL++L K+L +L +
Sbjct: 957 LNIMMDLKKCCNHPYLFPVA--AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEG 1014
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM +MLD+L +++ Y+G++++R+DG LR +A+D FNAPG++ FCFLLST
Sbjct: 1015 HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST 1074
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQE 610
RAGGLGINLATADTVII+DSDWNP ND+QA SRAHRIGQ +
Sbjct: 1075 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNK 1115
Score = 141 (54.7 bits), Expect = 5.3e-132, Sum P(2) = 5.3e-132
Identities = 55/173 (31%), Positives = 77/173 (44%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL--NYAKK--VVEDVRFRKMVSREEIE 68
E EF +KW G S+ HC W ELQ L + V+ NY +K + E F S +E
Sbjct: 482 EREFFVKWAGLSYWHCSWVK--ELQ-LELYHTVMYRNYQRKNDMDEPPPF-DYGSGDEDG 537
Query: 69 LNDVSKEMDLDIIKQNSQVER-------IIADRI---SKDSSGNVTQEYLVKWKGLSYAE 118
++ K D K + R ++ RI S D G+V YL+KWK L Y +
Sbjct: 538 KSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDV--HYLIKWKDLPYDQ 595
Query: 119 ATWEKDEI-IDFAQDAIDEYKA-REAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
TWE D+I I + + Y RE + E ++ KKGK E+P
Sbjct: 596 CTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKP 648
Score = 65 (27.9 bits), Expect = 5.7e-124, Sum P(2) = 5.7e-124
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATWEKD 124
K G +E+ VKW GLSY +W K+
Sbjct: 475 KPLEGIPEREFFVKWAGLSYWHCSWVKE 502
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 1221 (434.9 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 275/695 (39%), Positives = 415/695 (59%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ +Y+ R E +++ K R ++ P +++ GKLRDYQ+ GLN+L++ +
Sbjct: 137 SVGDYRHRRTEQEEDEELLTESSKATNVCTR-FEDSPSYVKWGKLRDYQVRGLNWLISLY 195
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++S+LG++++ + IPGP +V+VP STL NW EF++W+PT+
Sbjct: 196 ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTL 255
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
+ +G + R F D V P +++ +T+YE+++K+K+V K W YL++D
Sbjct: 256 RSVCLIGDKEQRAA-----FVRD--VLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVID 308
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L + EF T N+LL+TGTPLQN++ ELW+LL+FL D F S DDF
Sbjct: 309 EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSW 368
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + +L LHM LRP +LRRI DVEKSLPPK E + V +S +Q+++Y IL
Sbjct: 369 FDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL 428
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILS 491
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T ++ ++ +
Sbjct: 429 MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH-------LVTN 481
Query: 492 SGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQA 551
SGK+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++ +++ RLDG T + R ++
Sbjct: 482 SGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQES 541
Query: 552 MDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV 611
++ +N P S F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQ +
Sbjct: 542 INAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKT 601
Query: 612 VNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAE 671
V ++RF+T +VEE I+ERA+ K+ LD +VIQ+ K + +E+ ++R GA
Sbjct: 602 VRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGK--DEMLQMIRHGAT 659
Query: 672 ELF--KEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVANFCGA-- 727
+F KE +E +L + V NF G
Sbjct: 660 HVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY 719
Query: 728 -EDDGSFWSRWIKP---EAVAQ-AEDALAPRAAR--NTKSYAEANEPERSNKRK-----K 775
E ++ WI+P E A A DA A R K+ P++ N +
Sbjct: 720 REKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP 779
Query: 776 KGSELQEPQERVHKRRKAEFSVPSVPFI-DGASAQ 809
+ EL E +E ++ R+ + VP P + + A AQ
Sbjct: 780 RLFELLE-KEILYYRKTIGYKVPRNPDLPNAAQAQ 813
Score = 92 (37.4 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 815 YGNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVE 874
+ N +KRD +F +A K+G + I IAR+ G P+EV+ E + + C E +
Sbjct: 842 FTNWNKRDFNQFIKANEKWG-RDDIENIAREVEGKT---PEEVI-EYSAVFWERCNELQD 896
Query: 875 VGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWS 934
+ K ++ ++ R+ + L +I RY+ P Q R+ SY +
Sbjct: 897 I----EKIMAQIERGEARIQ-----RRISIKKALDTKIGRYKAPFHQLRI-SY----GTN 942
Query: 935 KGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPR--APNL 992
KG + + +D L+ +H GF EN+ DE L + I + FL A L
Sbjct: 943 KGKNYTEEEDRFLICMLHKLGFDK-ENV-YDE---LRQCIRNSPQFRFDWFLKSRTAMEL 997
Query: 993 KERANALLEM 1002
+ R N L+ +
Sbjct: 998 QRRCNTLITL 1007
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 1221 (434.9 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 275/695 (39%), Positives = 415/695 (59%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ +Y+ R E +++ K R ++ P +++ GKLRDYQ+ GLN+L++ +
Sbjct: 137 SVGDYRHRRTEQEEDEELLTESSKATNVCTR-FEDSPSYVKWGKLRDYQVRGLNWLISLY 195
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++S+LG++++ + IPGP +V+VP STL NW EF++W+PT+
Sbjct: 196 ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTL 255
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
+ +G + R F D V P +++ +T+YE+++K+K+V K W YL++D
Sbjct: 256 RSVCLIGDKEQRAA-----FVRD--VLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVID 308
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L + EF T N+LL+TGTPLQN++ ELW+LL+FL D F S DDF
Sbjct: 309 EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSW 368
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + +L LHM LRP +LRRI DVEKSLPPK E + V +S +Q+++Y IL
Sbjct: 369 FDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL 428
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILS 491
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T ++ ++ +
Sbjct: 429 MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH-------LVTN 481
Query: 492 SGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQA 551
SGK+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++ +++ RLDG T + R ++
Sbjct: 482 SGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQES 541
Query: 552 MDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV 611
++ +N P S F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQ +
Sbjct: 542 INAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKT 601
Query: 612 VNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAE 671
V ++RF+T +VEE I+ERA+ K+ LD +VIQ+ K + +E+ ++R GA
Sbjct: 602 VRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGK--DEMLQMIRHGAT 659
Query: 672 ELF--KEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVANFCGA-- 727
+F KE +E +L + V NF G
Sbjct: 660 HVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY 719
Query: 728 -EDDGSFWSRWIKP---EAVAQ-AEDALAPRAAR--NTKSYAEANEPERSNKRK-----K 775
E ++ WI+P E A A DA A R K+ P++ N +
Sbjct: 720 REKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP 779
Query: 776 KGSELQEPQERVHKRRKAEFSVPSVPFI-DGASAQ 809
+ EL E +E ++ R+ + VP P + + A AQ
Sbjct: 780 RLFELLE-KEILYYRKTIGYKVPRNPDLPNAAQAQ 813
Score = 92 (37.4 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 815 YGNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVE 874
+ N +KRD +F +A K+G + I IAR+ G P+EV+ E + + C E +
Sbjct: 842 FTNWNKRDFNQFIKANEKWG-RDDIENIAREVEGKT---PEEVI-EYSAVFWERCNELQD 896
Query: 875 VGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWS 934
+ K ++ ++ R+ + L +I RY+ P Q R+ SY +
Sbjct: 897 I----EKIMAQIERGEARIQ-----RRISIKKALDTKIGRYKAPFHQLRI-SY----GTN 942
Query: 935 KGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPR--APNL 992
KG + + +D L+ +H GF EN+ DE L + I + FL A L
Sbjct: 943 KGKNYTEEEDRFLICMLHKLGFDK-ENV-YDE---LRQCIRNSPQFRFDWFLKSRTAMEL 997
Query: 993 KERANALLEM 1002
+ R N L+ +
Sbjct: 998 QRRCNTLITL 1007
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 1221 (434.9 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 275/695 (39%), Positives = 415/695 (59%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ +Y+ R E +++ K R ++ P +++ GKLRDYQ+ GLN+L++ +
Sbjct: 137 SVGDYRHRRTEQEEDEELLTESSKATNVCTR-FEDSPSYVKWGKLRDYQVRGLNWLISLY 195
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++S+LG++++ + IPGP +V+VP STL NW EF++W+PT+
Sbjct: 196 ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTL 255
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
+ +G + R F D V P +++ +T+YE+++K+K+V K W YL++D
Sbjct: 256 RSVCLIGDKEQRAA-----FVRD--VLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVID 308
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L + EF T N+LL+TGTPLQN++ ELW+LL+FL D F S DDF
Sbjct: 309 EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSW 368
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + +L LHM LRP +LRRI DVEKSLPPK E + V +S +Q+++Y IL
Sbjct: 369 FDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL 428
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILS 491
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T ++ ++ +
Sbjct: 429 MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH-------LVTN 481
Query: 492 SGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQA 551
SGK+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++ +++ RLDG T + R ++
Sbjct: 482 SGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQES 541
Query: 552 MDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV 611
++ +N P S F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQ +
Sbjct: 542 INAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKT 601
Query: 612 VNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAE 671
V ++RF+T +VEE I+ERA+ K+ LD +VIQ+ K + +E+ ++R GA
Sbjct: 602 VRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGK--DEMLQMIRHGAT 659
Query: 672 ELF--KEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVANFCGA-- 727
+F KE +E +L + V NF G
Sbjct: 660 HVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY 719
Query: 728 -EDDGSFWSRWIKP---EAVAQ-AEDALAPRAAR--NTKSYAEANEPERSNKRK-----K 775
E ++ WI+P E A A DA A R K+ P++ N +
Sbjct: 720 REKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP 779
Query: 776 KGSELQEPQERVHKRRKAEFSVPSVPFI-DGASAQ 809
+ EL E +E ++ R+ + VP P + + A AQ
Sbjct: 780 RLFELLE-KEILYYRKTIGYKVPRNPDLPNAAQAQ 813
Score = 92 (37.4 bits), Expect = 8.7e-132, Sum P(2) = 8.7e-132
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 815 YGNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVE 874
+ N +KRD +F +A K+G + I IAR+ G P+EV+ E + + C E +
Sbjct: 842 FTNWNKRDFNQFIKANEKWG-RDDIENIAREVEGKT---PEEVI-EYSAVFWERCNELQD 896
Query: 875 VGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWS 934
+ K ++ ++ R+ + L +I RY+ P Q R+ SY +
Sbjct: 897 I----EKIMAQIERGEARIQ-----RRISIKKALDTKIGRYKAPFHQLRI-SY----GTN 942
Query: 935 KGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPR--APNL 992
KG + + +D L+ +H GF EN+ DE L + I + FL A L
Sbjct: 943 KGKNYTEEEDRFLICMLHKLGFDK-ENV-YDE---LRQCIRNSPQFRFDWFLKSRTAMEL 997
Query: 993 KERANALLEM 1002
+ R N L+ +
Sbjct: 998 QRRCNTLITL 1007
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 1220 (434.5 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
Identities = 275/695 (39%), Positives = 414/695 (59%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ +Y+ R E +++ K R ++ P +++ GKLRDYQ+ GLN+L++ +
Sbjct: 136 SVGDYRHRRTEQEEDEELLTESSKATNVCTR-FEDSPSYVKWGKLRDYQVRGLNWLISLY 194
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++S+LG++++ + IPGP +V+VP STL NW EF++W+PT+
Sbjct: 195 ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTL 254
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
+ +G + R F D V P +++ +T+YE+++K+K+V K W YL++D
Sbjct: 255 RSVCLIGDKEQRAA-----FVRD--VLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVID 307
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L + EF T N+LL+TGTPLQN++ ELW+LL+FL D F S DDF
Sbjct: 308 EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSW 367
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + +L LHM LRP +LRRI DVEKSLPPK E + V +S +Q+++Y IL
Sbjct: 368 FDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL 427
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILS 491
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T ++ ++ +
Sbjct: 428 MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH-------LVTN 480
Query: 492 SGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQA 551
SGK+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++ +++ RLDG T + R +
Sbjct: 481 SGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDS 540
Query: 552 MDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV 611
++ +N P S F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQ +
Sbjct: 541 INAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKT 600
Query: 612 VNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAE 671
V ++RF+T +VEE I+ERA+ K+ LD +VIQ+ K + +E+ ++R GA
Sbjct: 601 VRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGK--DEMLQMIRHGAT 658
Query: 672 ELF--KEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVANFCGA-- 727
+F KE +E +L + V NF G
Sbjct: 659 HVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY 718
Query: 728 -EDDGSFWSRWIKP---EAVAQ-AEDALAPRAAR--NTKSYAEANEPERSNKRK-----K 775
E ++ WI+P E A A DA A R K+ P++ N +
Sbjct: 719 REKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP 778
Query: 776 KGSELQEPQERVHKRRKAEFSVPSVPFI-DGASAQ 809
+ EL E +E ++ R+ + VP P + + A AQ
Sbjct: 779 RLFELLE-KEILYYRKTIGYKVPRSPDLPNAAQAQ 812
Score = 92 (37.4 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 815 YGNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVE 874
+ N +KRD +F +A K+G + I IAR+ G P+EV+ E + + C E +
Sbjct: 841 FTNWNKRDFNQFIKANEKWG-RDDIENIAREVEGKT---PEEVI-EYSAVFWERCNELQD 895
Query: 875 VGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWS 934
+ K ++ ++ R+ + L +I RY+ P Q R+ SY +
Sbjct: 896 I----EKIMAQIERGEARIQ-----RRISIKKALDTKIGRYKAPFHQLRI-SY----GTN 941
Query: 935 KGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPR--APNL 992
KG + + +D L+ +H GF EN+ DE L + I + FL A L
Sbjct: 942 KGKNYTEEEDRFLICMLHKLGFDK-ENV-YDE---LRQCIRNSPQFRFDWFLKSRTAMEL 996
Query: 993 KERANALLEM 1002
+ R N L+ +
Sbjct: 997 QRRCNTLITL 1006
Score = 37 (18.1 bits), Expect = 7.1e-126, Sum P(2) = 7.1e-126
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 986 LPRAPNLKERANALLEMEL 1004
+PR+P+L A A E +L
Sbjct: 799 VPRSPDLPNAAQAQKEEQL 817
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 1199 (427.1 bits), Expect = 2.8e-131, Sum P(3) = 2.8e-131
Identities = 283/747 (37%), Positives = 437/747 (58%)
Query: 50 KKVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQ-NSQV----ER--IIADRISKDSSGN 102
K+ ++ +R ++ +E+E N +++ D K N+++ ER I +S ++ N
Sbjct: 138 KERLKQIREQQRKQLQELEKNQ-RQQLQEDKEKSANARLKYLLERTEIFTHFVSNSNNNN 196
Query: 103 VTQEYLVKWKGLSYAEATWEKDEIIDFAQDAI-DEYKAREAAMAEQGK----MVDLQRKK 157
T++ K LS + A+ + + +I + + E+ + M + ++
Sbjct: 197 NTKKTKTKSPVLSSSSASSSNNNNNNNNNGSIVSSTPTKRGHITEEAEDEAIMNETMEEE 256
Query: 158 GKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLG 217
S P +++ G +RDYQ+ GLN+L+ + N ILADEMGLGKT+Q++S+LG
Sbjct: 257 EPHSFNFFTSSPPYIKSGTMRDYQVYGLNWLIQLYERGINGILADEMGLGKTLQTISLLG 316
Query: 218 FLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKK 277
+L + I GP L++ P STLS WAKEF +W P + V+ + G++ RE + ++
Sbjct: 317 YLSEYKGIRGPHLIIAPKSTLSGWAKEFTRWCPFLRVVRFHGSKEERE-----DIKKNQL 371
Query: 278 VGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKL 337
+ + KF+ +TTYEV +++K+ K W Y+++DEAHR+KN + L + F+++ +L
Sbjct: 372 IFK--KFDVCITTYEVAIREKSTFKKFSWRYIIIDEAHRIKNENSVLSKGVRMFNSQFRL 429
Query: 338 LITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENE---LANLHMELRPH 394
LITGTPLQN++ ELW+LL+FL D F S DDF + +L++ EN+ + LH LRP
Sbjct: 430 LITGTPLQNNLHELWSLLNFLLPDVFSSSDDF-DKWFDLANNTENQQEVIDKLHKVLRPF 488
Query: 395 ILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGN--QVSLLNI 452
+LRRI +VEKSLPPK E L V +S +QK++YK +L ++ + G +GN +V LLNI
Sbjct: 489 LLRRIKTEVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSKDLDAVVVGAKGNTGRVRLLNI 548
Query: 453 VVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRV 512
++L+K CNHP+LF+ A+ + E +I +SGK+ +LDKLL +L E RV
Sbjct: 549 CMQLRKACNHPYLFDGAEE--------EPYTTGEHLIDNSGKMALLDKLLKKLKERGSRV 600
Query: 513 LIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAG 572
LIFSQM RMLDIL +YM Y+G+++ R+DGST++ +R +++++N PGS+ F FLL+TRAG
Sbjct: 601 LIFSQMSRMLDILEDYMLYRGYKYARIDGSTESIVRENSIENYNKPGSDLFAFLLTTRAG 660
Query: 573 GLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAK 632
GLGI L TAD VI+FDSDWNPQ DLQA RAHRIGQ + V +YRFVT S+EE ++E+A+
Sbjct: 661 GLGITLNTADIVILFDSDWNPQMDLQAQDRAHRIGQTKPVTVYRFVTENSMEEKMVEKAE 720
Query: 633 KKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRN---DEESKKRLL- 688
K+ LD LVIQ+ + K K EL A+LRFGA+++FK + DE+ L
Sbjct: 721 MKLQLDALVIQQGRLVEA---NKNAKPEELLAMLRFGADDIFKSKSSTITDEDIDSILKK 777
Query: 689 GMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVANFCGAEDDGSFWSRWIKPE--AVA-- 744
G + F N+ + +W+ +K E VA
Sbjct: 778 GEEKTEQLNSKVKDLASNPLKFQSDGNLYMFDGVNYKNSHSSAGYWAETLKRERKTVAGT 837
Query: 745 -QAEDALAPRAARNTKSYAEANEPERS 770
A++ +AP A K N+P+++
Sbjct: 838 VAADEEIAP-AKPVVKRERRFNKPKQT 863
Score = 68 (29.0 bits), Expect = 2.8e-131, Sum P(3) = 2.8e-131
Identities = 27/120 (22%), Positives = 43/120 (35%)
Query: 979 LQHHETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXRKASKKGREKSENILNMPISR 1038
++ H+ + A ++R +++L G+ K P
Sbjct: 1094 IKEHQEEVEAAKEAEKRKKEKEKLKLAASGVTASKAKTESPNKTLGKRKDAPPSKPPAKP 1153
Query: 1039 LKRDKKGKPGSAKVNFQTTKDRF------HKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
K K KP TTK KP E+P+ +EE E + EE E+ +EVK
Sbjct: 1154 SKASAKSKPAPKSKTSTTTKPTTTNGRGKKKPVEEEEPMEEEEEEEEEVEEEEEE-EEVK 1212
Score = 56 (24.8 bits), Expect = 2.8e-131, Sum P(3) = 2.8e-131
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 894 KANDLINRVEELQ-LLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIH 952
K + I + +E Q L +I++Y++P + ++ LK K +N +D L+ H
Sbjct: 994 KGEERIMKYKETQDSLNYKINKYKNPWIELKIQYGLK-----KNKNYNDEEDIFLVCMCH 1048
Query: 953 YHGFGNWENIRLDER 967
G+G +E ++ + R
Sbjct: 1049 RLGYGAFEELKEEIR 1063
Score = 50 (22.7 bits), Expect = 5.0e-125, Sum P(2) = 5.0e-125
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 1042 DKKGKPGSAKVNFQTTKDRFHKPQRVEQP----LTKEEGEMSD 1080
+K+ + + KV + KD+ P+ E+P L+KEE ++ +
Sbjct: 880 EKENEAYNKKVEWYDQKDKGELPEEEEEPDFGDLSKEEQDLKE 922
Score = 41 (19.5 bits), Expect = 4.5e-124, Sum P(2) = 4.5e-124
Identities = 12/51 (23%), Positives = 20/51 (39%)
Query: 739 KPEAVAQAEDALAPRAA--RNTKSYAEANEPERSNKRKKKGSELQEPQERV 787
KP ++ P R K E EP + +++ E +E +E V
Sbjct: 1161 KPAPKSKTSTTTKPTTTNGRGKKKPVEEEEPMEEEEEEEEEVEEEEEEEEV 1211
Score = 37 (18.1 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 1027 KSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEE 1083
K E N P D + P ++ + ++K +VE K++GE+ + EE
Sbjct: 852 KRERRFNKPKQTPIYDFQFYPPRLTQLYEKENEAYNK--KVEWYDQKDKGELPEEEE 906
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 1216 (433.1 bits), Expect = 2.9e-131, Sum P(2) = 2.9e-131
Identities = 275/695 (39%), Positives = 413/695 (59%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ +Y+ R E +++ K R ++ P +++ GKLRDYQ+ GLN+L++ +
Sbjct: 137 SVGDYRHRRTEQEEDEELLTESSKATNVCTR-FEDSPSYVKWGKLRDYQVRGLNWLISLY 195
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++S+LG++++ + IPGP +V+VP STL NW EF++W+PT+
Sbjct: 196 ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTL 255
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
+ +G + R F D V P +++ +T+YE+++K+K+V K W YL++D
Sbjct: 256 RSVCLIGDKEQRAA-----FVRD--VLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVID 308
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L + EF T N+LL+TGTPLQN++ ELW+LL+FL D F S DDF
Sbjct: 309 EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSW 368
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + +L LHM LRP +LRRI DVEKSLPPK E + V +S +Q+++Y IL
Sbjct: 369 FDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL 428
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILS 491
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T ++ ++ +
Sbjct: 429 MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMH-------LVTN 481
Query: 492 SGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQA 551
SGK+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++ +++ RLDG T + R +
Sbjct: 482 SGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDS 541
Query: 552 MDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV 611
++ +N P S F F+LSTRAGGLGINLATAD VI++DSDWNPQ DLQAM RAHRIGQ +
Sbjct: 542 INAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKT 601
Query: 612 VNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAE 671
V ++RF+T +VEE I+ERA+ K+ LD +VIQ+ K + +E+ ++R GA
Sbjct: 602 VRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGK--DEMLQMIRHGAT 659
Query: 672 ELF--KEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVANFCGA-- 727
+F KE +E +L + V NF G
Sbjct: 660 HVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY 719
Query: 728 -EDDGSFWSRWIKP---EAVAQ-AEDALAPRAAR--NTKSYAEANEPERSNKRK-----K 775
E ++ WI+P E A A DA A R K+ P++ N +
Sbjct: 720 REKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP 779
Query: 776 KGSELQEPQERVHKRRKAEFSVPSVPFI-DGASAQ 809
+ EL E +E + R+ + VP P + + A AQ
Sbjct: 780 RLFELLE-KEILFYRKTIGYKVPRNPELPNAAQAQ 813
Score = 92 (37.4 bits), Expect = 2.9e-131, Sum P(2) = 2.9e-131
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 815 YGNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVE 874
+ N +KRD +F +A K+G + I IAR+ G P+EV+ E + + C E +
Sbjct: 842 FTNWNKRDFNQFIKANEKWG-RDDIENIAREVEGKT---PEEVI-EYSAVFWERCNELQD 896
Query: 875 VGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWS 934
+ K ++ ++ R+ + L +I RY+ P Q R+ SY +
Sbjct: 897 I----EKIMAQIERGEARIQ-----RRISIKKALDTKIGRYKAPFHQLRI-SY----GTN 942
Query: 935 KGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPR--APNL 992
KG + + +D L+ +H GF EN+ DE L + I + FL A L
Sbjct: 943 KGKNYTEEEDRFLICMLHKLGFDK-ENV-YDE---LRQCIRNSPQFRFDWFLKSRTAMEL 997
Query: 993 KERANALLEM 1002
+ R N L+ +
Sbjct: 998 QRRCNTLITL 1007
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 1222 (435.2 bits), Expect = 6.9e-130, Sum P(2) = 6.9e-130
Identities = 252/558 (45%), Positives = 372/558 (66%)
Query: 137 YKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDT 196
Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ + N
Sbjct: 156 YRHRRTEQEEDEELLSESRKTSNVCVR-FEVSPSYVKGGPLRDYQIRGLNWLISLYENGV 214
Query: 197 NVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIV 256
N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++ VI
Sbjct: 215 NGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVIC 274
Query: 257 YVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHR 316
+VG + +R F D+ + P +++ +T+YE+V+K+K+V K W YL++DEAHR
Sbjct: 275 FVGDKDARAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHR 327
Query: 317 LKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNL 376
+KN +++L + EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF +
Sbjct: 328 IKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTK 387
Query: 377 SSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQY-YKWILERN 434
+ + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q+++ Y IL ++
Sbjct: 388 NCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWWYTKILMKD 447
Query: 435 FHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGK 494
LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T E I+ +SGK
Sbjct: 448 IDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD-------EHIVSNSGK 500
Query: 495 LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRH--QAM 552
+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++G+++ RLDG T E R +A+
Sbjct: 501 MVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREKKEAI 560
Query: 553 DHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVV 612
+ FNAP S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ DLQAM RAHRIGQ++ V
Sbjct: 561 EAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 620
Query: 613 NIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEE 672
++R +T +VEE I+ERA+ K+ LD +VIQ+ K ++ E+ ++R GA
Sbjct: 621 RVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKE--EMLQMIRHGATH 678
Query: 673 LF--KEDRNDEESKKRLL 688
+F KE +E LL
Sbjct: 679 VFASKESELTDEDITTLL 696
Score = 73 (30.8 bits), Expect = 6.9e-130, Sum P(2) = 6.9e-130
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 789 KRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG 848
+++K + + P P ++ + N +KRD +F +A K+G + I IAR+ G
Sbjct: 834 EQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYG-RDDIDNIAREVEG 892
Query: 849 AVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLL 908
+P+EV+ E + + C E ++ K ++ ++ R+ + L
Sbjct: 893 K---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ-----RRISIKKAL 939
Query: 909 AKRISRYEDPIKQFRV 924
+I+RY+ P Q R+
Sbjct: 940 DAKIARYKAPFHQLRI 955
Score = 64 (27.6 bits), Expect = 6.2e-129, Sum P(2) = 6.2e-129
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 932 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 985
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 986 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 1025
Score = 37 (18.1 bits), Expect = 4.4e-126, Sum P(2) = 4.4e-126
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 759 KSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPS 799
K E E ER+ K+K+ + P + +RKAE + S
Sbjct: 1028 KENMEIEERERAEKKKRA---TKTPMSQ---KRKAESATES 1062
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 1163 (414.5 bits), Expect = 3.5e-129, Sum P(3) = 3.5e-129
Identities = 243/559 (43%), Positives = 360/559 (64%)
Query: 128 DFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNF 187
D +D D ++ R+ E ++ L + + D P +++ G++RDYQ+ GLN+
Sbjct: 82 DKEKDVAD-HRHRKTEQEEDEEL--LAEDSATKEIFRFDASPAYIKSGEMRDYQIRGLNW 138
Query: 188 LVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRK 247
+++ + N N ILADEMGLGKT+Q++S+LG+L++ + GP +V+VP STL NW EF+K
Sbjct: 139 MISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKK 198
Query: 248 WLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWN 307
W P++ + +G + +R F D V P +++ +T+YE+ +++K+V K W
Sbjct: 199 WCPSLRAVCLIGDQDTRNT-----FIRD--VLMPGEWDVCVTSYEMCIREKSVFKKFNWR 251
Query: 308 YLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKD 367
YL++DEAHR+KN +++L L EF T N+LLITGTPLQN++ ELWALL+FL D F S +
Sbjct: 252 YLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSE 311
Query: 368 DFIQNYKNLSSFNENEL-ANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQY 426
DF + + + ++ L LH L+P +LRR+ +VEK L PK E + V +S +Q+ +
Sbjct: 312 DFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDW 371
Query: 427 YKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLE 486
Y +L ++ +N + ++ L NI+++L+KC NHP+LF+ A+ G T DT
Sbjct: 372 YTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTT---DT---- 424
Query: 487 RIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAE 546
++ +SGK+ ILDKLL +L E RVLIFSQM RMLDIL +Y ++ + + RLDG T E
Sbjct: 425 HLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHE 484
Query: 547 LRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRI 606
R++ + FN S F F+LSTRAGGLGINLATAD VII+DSDWNPQ DLQAM RAHRI
Sbjct: 485 DRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRI 544
Query: 607 GQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAIL 666
GQ++ V ++R +T +VEE I+ERA+ K+ LD +VIQ + R Q +E+ I+
Sbjct: 545 GQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDN--RSNQLNKDEMLNII 602
Query: 667 RFGAEELF--KE-DRNDEE 682
RFGA ++F KE D DE+
Sbjct: 603 RFGANQVFSSKETDITDED 621
Score = 90 (36.7 bits), Expect = 3.5e-129, Sum P(3) = 3.5e-129
Identities = 49/186 (26%), Positives = 81/186 (43%)
Query: 819 SKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSP 878
+KRD +F +A K+G + I IA+D G P+EV+ E + + C E ++
Sbjct: 801 TKRDFNQFIKANEKYG-RDDIDNIAKDVEGKT---PEEVI-EYNAVFWERCTELQDIER- 854
Query: 879 DPKGPPLLDFFGVSVKANDLINRVEELQ-LLAKRISRYEDPIKQFRVLSYLKPSNWSKGC 937
G + I R ++ L +++SRY P Q R L Y N +KG
Sbjct: 855 ---------IMGQIERGEGKIQRRLSIKKALDQKMSRYRAPFHQLR-LQY---GN-NKGK 900
Query: 938 GWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERA 996
+ + +D L+ +H GF EN+ E L + +P + + R A L+ R
Sbjct: 901 NYTEIEDRFLVCMLHKLGFDK-ENVY--EELRAAIRASP-QFRFDWFIKSRTALELQRRC 956
Query: 997 NALLEM 1002
N L+ +
Sbjct: 957 NTLITL 962
Score = 50 (22.7 bits), Expect = 3.5e-129, Sum P(3) = 3.5e-129
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 643 QKLNAEGSWRR--KKQRKGN 660
QKLNA G+W K++RK N
Sbjct: 676 QKLNALGNWIEPPKRERKAN 695
Score = 41 (19.5 bits), Expect = 5.1e-124, Sum P(3) = 5.1e-124
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRK 792
K +A + A + A+ NT A A +P+ S KRK SE+ K++K
Sbjct: 979 KKKAPKGSVSAGSGSASSNTP--APAPQPKASQKRK---SEVVATSSNSKKKKK 1027
Score = 40 (19.1 bits), Expect = 6.5e-124, Sum P(3) = 6.5e-124
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 763 EANEPERSNKRKK--KGS 778
E E ER+ K+KK KGS
Sbjct: 969 ELEEKERAEKKKKAPKGS 986
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 1214 (432.4 bits), Expect = 4.8e-129, Sum P(2) = 4.8e-129
Identities = 251/563 (44%), Positives = 372/563 (66%)
Query: 136 EYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRND 195
+Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ + N
Sbjct: 122 DYRHRRTEQEEDEELLSESRKTSNVCIR-FEVSPSYVKGGPLRDYQIRGLNWLISLYENG 180
Query: 196 TNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVI 255
N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++ VI
Sbjct: 181 VNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVI 240
Query: 256 VYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAH 315
+VG + +R F D+ + P +++ +T+YE+V+K+K+V K W YL++DEAH
Sbjct: 241 CFVGDKDARAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAH 293
Query: 316 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKN 375
R+KN +++L + EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF +
Sbjct: 294 RIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT 353
Query: 376 LSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 434
+ + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q+++Y IL ++
Sbjct: 354 KNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKD 413
Query: 435 FHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGK 494
LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T E I+ +SGK
Sbjct: 414 IDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD-------EHIVSNSGK 466
Query: 495 LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRH----- 549
+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++G+++ RLDG T E R
Sbjct: 467 MVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLE 526
Query: 550 -------QAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+A++ FNAP S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ DLQAM R
Sbjct: 527 VEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDR 586
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNEL 662
AHRIGQ++ V ++R +T +VEE I+ERA+ K+ LD +VIQ+ K ++ E+
Sbjct: 587 AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKE--EM 644
Query: 663 SAILRFGAEELF--KEDR-NDEE 682
++R GA +F KE DE+
Sbjct: 645 LQMIRHGATHVFASKESELTDED 667
Score = 73 (30.8 bits), Expect = 4.8e-129, Sum P(2) = 4.8e-129
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 789 KRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG 848
+++K + + P P ++ + N +KRD +F +A K+G + I IAR+ G
Sbjct: 810 EQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYG-RDDIDNIAREVEG 868
Query: 849 AVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLL 908
+P+EV+ E + + C E ++ K ++ ++ R+ + L
Sbjct: 869 K---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ-----RRISIKKAL 915
Query: 909 AKRISRYEDPIKQFRV 924
+I+RY+ P Q R+
Sbjct: 916 DAKIARYKAPFHQLRI 931
Score = 64 (27.6 bits), Expect = 4.3e-128, Sum P(2) = 4.3e-128
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 908 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 961
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 962 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 1001
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 1214 (432.4 bits), Expect = 4.8e-129, Sum P(2) = 4.8e-129
Identities = 251/563 (44%), Positives = 372/563 (66%)
Query: 136 EYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRND 195
+Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ + N
Sbjct: 143 DYRHRRTEQEEDEELLSESRKTSNVCIR-FEVSPSYVKGGPLRDYQIRGLNWLISLYENG 201
Query: 196 TNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVI 255
N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++ VI
Sbjct: 202 VNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVI 261
Query: 256 VYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAH 315
+VG + +R F D+ + P +++ +T+YE+V+K+K+V K W YL++DEAH
Sbjct: 262 CFVGDKDARAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAH 314
Query: 316 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKN 375
R+KN +++L + EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF +
Sbjct: 315 RIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT 374
Query: 376 LSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 434
+ + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q+++Y IL ++
Sbjct: 375 KNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKD 434
Query: 435 FHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGK 494
LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T E I+ +SGK
Sbjct: 435 IDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD-------EHIVSNSGK 487
Query: 495 LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRH----- 549
+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++G+++ RLDG T E R
Sbjct: 488 MVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLE 547
Query: 550 -------QAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+A++ FNAP S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ DLQAM R
Sbjct: 548 VEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDR 607
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNEL 662
AHRIGQ++ V ++R +T +VEE I+ERA+ K+ LD +VIQ+ K ++ E+
Sbjct: 608 AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKE--EM 665
Query: 663 SAILRFGAEELF--KEDR-NDEE 682
++R GA +F KE DE+
Sbjct: 666 LQMIRHGATHVFASKESELTDED 688
Score = 73 (30.8 bits), Expect = 4.8e-129, Sum P(2) = 4.8e-129
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 789 KRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG 848
+++K + + P P ++ + N +KRD +F +A K+G + I IAR+ G
Sbjct: 831 EQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYG-RDDIDNIAREVEG 889
Query: 849 AVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLL 908
+P+EV+ E + + C E ++ K ++ ++ R+ + L
Sbjct: 890 K---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ-----RRISIKKAL 936
Query: 909 AKRISRYEDPIKQFRV 924
+I+RY+ P Q R+
Sbjct: 937 DAKIARYKAPFHQLRI 952
Score = 64 (27.6 bits), Expect = 4.3e-128, Sum P(2) = 4.3e-128
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 929 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 982
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 983 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 1022
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 1212 (431.7 bits), Expect = 7.9e-129, Sum P(2) = 7.9e-129
Identities = 251/568 (44%), Positives = 372/568 (65%)
Query: 136 EYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRND 195
+Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ + N
Sbjct: 146 DYRHRRTEQEEDEELLSESRKTSNVCVR-FEVSPSYVKGGPLRDYQIRGLNWLISLYENG 204
Query: 196 TNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVI 255
N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++ VI
Sbjct: 205 VNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVI 264
Query: 256 VYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAH 315
+VG + +R F D+ + P +++ +T+YE+V+K+K+V K W YL++DEAH
Sbjct: 265 CFVGDKDARAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAH 317
Query: 316 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKN 375
R+KN +++L + EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF +
Sbjct: 318 RIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT 377
Query: 376 LSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 434
+ + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q+++Y IL ++
Sbjct: 378 KNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKD 437
Query: 435 FHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGK 494
LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T E I+ +SGK
Sbjct: 438 IDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD-------EHIVSNSGK 490
Query: 495 LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAE-------- 546
+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++G+++ RLDG T E
Sbjct: 491 MVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEERENGFLQ 550
Query: 547 ----LRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
R +A++ FN P S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ DLQAM R
Sbjct: 551 IYFRRRREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDR 610
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNEL 662
AHRIGQ++ V ++R +T +VEE I+ERA+ K+ LD +VIQ+ K ++ E+
Sbjct: 611 AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKE--EM 668
Query: 663 SAILRFGAEELF--KEDRNDEESKKRLL 688
++R GA +F KE +E LL
Sbjct: 669 LQMIRHGATHVFASKESELTDEDITTLL 696
Score = 73 (30.8 bits), Expect = 7.9e-129, Sum P(2) = 7.9e-129
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 789 KRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG 848
+++K + + P P ++ + N +KRD +F +A K+G + I IAR+ G
Sbjct: 834 EQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYG-RDDIDNIAREVEG 892
Query: 849 AVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLL 908
+P+EV+ E + + C E ++ K ++ ++ R+ + L
Sbjct: 893 K---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ-----RRISIKKAL 939
Query: 909 AKRISRYEDPIKQFRV 924
+I+RY+ P Q R+
Sbjct: 940 DAKIARYKAPFHQLRI 955
Score = 64 (27.6 bits), Expect = 7.0e-128, Sum P(2) = 7.0e-128
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 932 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 985
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 986 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 1025
Score = 37 (18.1 bits), Expect = 5.0e-125, Sum P(2) = 5.0e-125
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 759 KSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPS 799
K E E ER+ K+K+ + P + +RKAE + S
Sbjct: 1028 KENMEIEERERAEKKKRA---TKTPMSQ---KRKAESATES 1062
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 1211 (431.4 bits), Expect = 1.0e-128, Sum P(2) = 1.0e-128
Identities = 251/568 (44%), Positives = 372/568 (65%)
Query: 136 EYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRND 195
+Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ + N
Sbjct: 146 DYRHRRTEQEEDEELLSESRKTSNVCVR-FEVSPSYVKGGPLRDYQIRGLNWLISLYENG 204
Query: 196 TNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVI 255
N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++ VI
Sbjct: 205 VNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVI 264
Query: 256 VYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAH 315
+VG + +R F D+ + P +++ +T+YE+V+K+K+V K W YL++DEAH
Sbjct: 265 CFVGDKDARAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAH 317
Query: 316 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKN 375
R+KN +++L + EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF +
Sbjct: 318 RIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT 377
Query: 376 LSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 434
+ + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q+++Y IL ++
Sbjct: 378 KNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKD 437
Query: 435 FHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGK 494
LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T E I+ +SGK
Sbjct: 438 IDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD-------EHIVSNSGK 490
Query: 495 LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRH----- 549
+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++G+++ RLDG T E R
Sbjct: 491 MVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLE 550
Query: 550 -------QAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+A++ FN P S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ DLQAM R
Sbjct: 551 VELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDR 610
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNEL 662
AHRIGQ++ V ++R +T +VEE I+ERA+ K+ LD +VIQ+ K ++ E+
Sbjct: 611 AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKE--EM 668
Query: 663 SAILRFGAEELF--KEDRNDEESKKRLL 688
++R GA +F KE +E LL
Sbjct: 669 LQMIRHGATHVFASKESELTDEDITTLL 696
Score = 73 (30.8 bits), Expect = 1.0e-128, Sum P(2) = 1.0e-128
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 789 KRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG 848
+++K + + P P ++ + N +KRD +F +A K+G + I IAR+ G
Sbjct: 834 EQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYG-RDDIDNIAREVEG 892
Query: 849 AVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLL 908
+P+EV+ E + + C E ++ K ++ ++ R+ + L
Sbjct: 893 K---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ-----RRISIKKAL 939
Query: 909 AKRISRYEDPIKQFRV 924
+I+RY+ P Q R+
Sbjct: 940 DAKIARYKAPFHQLRI 955
Score = 64 (27.6 bits), Expect = 8.9e-128, Sum P(2) = 8.9e-128
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 932 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 985
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 986 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 1025
Score = 37 (18.1 bits), Expect = 6.4e-125, Sum P(2) = 6.4e-125
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 759 KSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPS 799
K E E ER+ K+K+ + P + +RKAE + S
Sbjct: 1028 KENMEIEERERAEKKKRA---TKTPMSQ---KRKAESATES 1062
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 1211 (431.4 bits), Expect = 1.0e-128, Sum P(2) = 1.0e-128
Identities = 251/568 (44%), Positives = 372/568 (65%)
Query: 136 EYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRND 195
+Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ + N
Sbjct: 146 DYRHRRTEQEEDEELLSESRKTSNVCVR-FEVSPSYVKGGPLRDYQIRGLNWLISLYENG 204
Query: 196 TNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVI 255
N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++ VI
Sbjct: 205 VNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVI 264
Query: 256 VYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAH 315
+VG + +R F D+ + P +++ +T+YE+V+K+K+V K W YL++DEAH
Sbjct: 265 CFVGDKDARAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAH 317
Query: 316 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKN 375
R+KN +++L + EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF +
Sbjct: 318 RIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT 377
Query: 376 LSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 434
+ + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q+++Y IL ++
Sbjct: 378 KNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKD 437
Query: 435 FHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGK 494
LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T E I+ +SGK
Sbjct: 438 IDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD-------EHIVSNSGK 490
Query: 495 LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRH----- 549
+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++G+++ RLDG T E R
Sbjct: 491 MVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLE 550
Query: 550 -------QAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
+A++ FN P S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ DLQAM R
Sbjct: 551 VELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDR 610
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNEL 662
AHRIGQ++ V ++R +T +VEE I+ERA+ K+ LD +VIQ+ K ++ E+
Sbjct: 611 AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKE--EM 668
Query: 663 SAILRFGAEELF--KEDRNDEESKKRLL 688
++R GA +F KE +E LL
Sbjct: 669 LQMIRHGATHVFASKESELTDEDITTLL 696
Score = 73 (30.8 bits), Expect = 1.0e-128, Sum P(2) = 1.0e-128
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 789 KRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG 848
+++K + + P P ++ + N +KRD +F +A K+G + I IAR+ G
Sbjct: 834 EQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYG-RDDIDNIAREVEG 892
Query: 849 AVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLL 908
+P+EV+ E + + C E ++ K ++ ++ R+ + L
Sbjct: 893 K---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ-----RRISIKKAL 939
Query: 909 AKRISRYEDPIKQFRV 924
+I+RY+ P Q R+
Sbjct: 940 DAKIARYKAPFHQLRI 955
Score = 64 (27.6 bits), Expect = 8.9e-128, Sum P(2) = 8.9e-128
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 932 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 985
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 986 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 1025
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 1204 (428.9 bits), Expect = 1.5e-128, Sum P(3) = 1.5e-128
Identities = 248/541 (45%), Positives = 363/541 (67%)
Query: 165 LDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ 224
+ E P +++ GKLR+YQ++GLN+L++ + N + ILADEMGLGKT+Q++S LG+L+ +
Sbjct: 127 MTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIKH 186
Query: 225 IPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKF 284
I GPF+V+VP STL NW +EF KW P +NV+V G + R + + Y KF
Sbjct: 187 IDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLYT-------AKF 239
Query: 285 NTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPL 344
+ L+T++E++L++K+ L K +W Y++VDEAHR+KN ++ L + F ++N+LLITGTPL
Sbjct: 240 DVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPL 299
Query: 345 QNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSS--FNENE--------LANLHMELRPH 394
QN++ ELWALL+FL D F D F + + N +S +E E ++ LH L P
Sbjct: 300 QNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDKAVSELHQLLSPF 359
Query: 395 ILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNK--GVRGNQVSLLNI 452
+LRR+ DVEKSL PKIE + + M+ +Q ++YK +LE++ +N G R + LLNI
Sbjct: 360 LLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVVGKREGKTRLLNI 419
Query: 453 VVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRV 512
V++L+KCCNHP+LF+ A+ G T E ++ +SGK++ILDK+L + RV
Sbjct: 420 VMQLRKCCNHPYLFDGAEPGPPYTTD-------EHLVYNSGKMIILDKMLKKFKAEGSRV 472
Query: 513 LIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAG 572
LIFSQM R+LDIL +Y ++ +++ R+DGST E R +A+D +NAP SE F FLL+TRAG
Sbjct: 473 LIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAG 532
Query: 573 GLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAK 632
GLGINL +AD VI++DSDWNPQ DLQAM RAHRIGQ++ V ++RFVT K++EE +LERA
Sbjct: 533 GLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAA 592
Query: 633 KKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDI 692
+K+ LD LVIQ+ S K ++L +++ GA+E+F E SK +L D+
Sbjct: 593 QKLRLDQLVIQQGRQMNSNNNVGNSK-DDLIGMIQHGAKEVF------ENSKGTMLDDDV 645
Query: 693 D 693
+
Sbjct: 646 E 646
Score = 71 (30.1 bits), Expect = 8.9e-128, Sum P(2) = 8.9e-128
Identities = 38/156 (24%), Positives = 67/156 (42%)
Query: 781 QEPQERVHKRRKAEFSVPSVPFIDGASAQVRDW----SYGNLSKRDATRFYRAVMKFGNQ 836
++ R KR+ A+ + + + RD S+ N S+RD T F A K+G +
Sbjct: 797 EDDMTRDEKRKIAQEKINNAVALTEEEIATRDRLLEESFHNWSRRDFTNFIHATAKYG-R 855
Query: 837 SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKAN 896
++ IA+ G + +E + + + +E G L V K
Sbjct: 856 NEYKKIAKALGNKKRSE-----IERYSKMFWQNYQKIE-GYEKY----LSQIEAVEKKRE 905
Query: 897 DLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSN 932
LIN + +LLAK+I +DP++ ++ Y P+N
Sbjct: 906 KLIN---QQKLLAKKIESLQDPLEDLKI-QY-PPNN 936
Score = 54 (24.1 bits), Expect = 1.5e-128, Sum P(3) = 1.5e-128
Identities = 39/132 (29%), Positives = 61/132 (46%)
Query: 1098 EDVMADEIRTLQR-LQ--RLQATSDNLPK--EKVASVFPSFCWHI------PLYSRIKH- 1145
+ ++A +I +LQ L+ ++Q +N + K F +C H LY +IK
Sbjct: 911 QKLLAKKIESLQDPLEDLKIQYPPNNSKRVYSKTEDKFLLYCVHKYGLSTENLYDKIKDE 970
Query: 1146 -LTSLLFFHFIQVLSKIRNYLQLIGRRIDQIVL----EHEEELYKQDRMTMRLWNYVSTF 1200
LTS +F + S+ Q IGRRI ++L E E L+ + R M N S F
Sbjct: 971 ILTSDIFKFDWYIRSRTP---QEIGRRISTLLLAITREMEGPLHGKKRKAMGESNNSSRF 1027
Query: 1201 -----SNLSGEK 1207
S+++GEK
Sbjct: 1028 GSVEPSSINGEK 1039
Score = 39 (18.8 bits), Expect = 1.5e-128, Sum P(3) = 1.5e-128
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 880 PKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQF 922
PK P + A++L+ +E QL K+ Y+ + F
Sbjct: 742 PKAPKSYNVQDHQFFADELVTLLEREQLAFKKEISYQYSVDDF 784
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 1204 (428.9 bits), Expect = 1.5e-128, Sum P(3) = 1.5e-128
Identities = 248/541 (45%), Positives = 363/541 (67%)
Query: 165 LDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ 224
+ E P +++ GKLR+YQ++GLN+L++ + N + ILADEMGLGKT+Q++S LG+L+ +
Sbjct: 127 MTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIKH 186
Query: 225 IPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKF 284
I GPF+V+VP STL NW +EF KW P +NV+V G + R + + Y KF
Sbjct: 187 IDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLYT-------AKF 239
Query: 285 NTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPL 344
+ L+T++E++L++K+ L K +W Y++VDEAHR+KN ++ L + F ++N+LLITGTPL
Sbjct: 240 DVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPL 299
Query: 345 QNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSS--FNENE--------LANLHMELRPH 394
QN++ ELWALL+FL D F D F + + N +S +E E ++ LH L P
Sbjct: 300 QNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDKAVSELHQLLSPF 359
Query: 395 ILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNK--GVRGNQVSLLNI 452
+LRR+ DVEKSL PKIE + + M+ +Q ++YK +LE++ +N G R + LLNI
Sbjct: 360 LLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVVGKREGKTRLLNI 419
Query: 453 VVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRV 512
V++L+KCCNHP+LF+ A+ G T E ++ +SGK++ILDK+L + RV
Sbjct: 420 VMQLRKCCNHPYLFDGAEPGPPYTTD-------EHLVYNSGKMIILDKMLKKFKAEGSRV 472
Query: 513 LIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAG 572
LIFSQM R+LDIL +Y ++ +++ R+DGST E R +A+D +NAP SE F FLL+TRAG
Sbjct: 473 LIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAG 532
Query: 573 GLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAK 632
GLGINL +AD VI++DSDWNPQ DLQAM RAHRIGQ++ V ++RFVT K++EE +LERA
Sbjct: 533 GLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAA 592
Query: 633 KKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLLGMDI 692
+K+ LD LVIQ+ S K ++L +++ GA+E+F E SK +L D+
Sbjct: 593 QKLRLDQLVIQQGRQMNSNNNVGNSK-DDLIGMIQHGAKEVF------ENSKGTMLDDDV 645
Query: 693 D 693
+
Sbjct: 646 E 646
Score = 71 (30.1 bits), Expect = 8.9e-128, Sum P(2) = 8.9e-128
Identities = 38/156 (24%), Positives = 67/156 (42%)
Query: 781 QEPQERVHKRRKAEFSVPSVPFIDGASAQVRDW----SYGNLSKRDATRFYRAVMKFGNQ 836
++ R KR+ A+ + + + RD S+ N S+RD T F A K+G +
Sbjct: 797 EDDMTRDEKRKIAQEKINNAVALTEEEIATRDRLLEESFHNWSRRDFTNFIHATAKYG-R 855
Query: 837 SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKAN 896
++ IA+ G + +E + + + +E G L V K
Sbjct: 856 NEYKKIAKALGNKKRSE-----IERYSKMFWQNYQKIE-GYEKY----LSQIEAVEKKRE 905
Query: 897 DLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSN 932
LIN + +LLAK+I +DP++ ++ Y P+N
Sbjct: 906 KLIN---QQKLLAKKIESLQDPLEDLKI-QY-PPNN 936
Score = 54 (24.1 bits), Expect = 1.5e-128, Sum P(3) = 1.5e-128
Identities = 39/132 (29%), Positives = 61/132 (46%)
Query: 1098 EDVMADEIRTLQR-LQ--RLQATSDNLPK--EKVASVFPSFCWHI------PLYSRIKH- 1145
+ ++A +I +LQ L+ ++Q +N + K F +C H LY +IK
Sbjct: 911 QKLLAKKIESLQDPLEDLKIQYPPNNSKRVYSKTEDKFLLYCVHKYGLSTENLYDKIKDE 970
Query: 1146 -LTSLLFFHFIQVLSKIRNYLQLIGRRIDQIVL----EHEEELYKQDRMTMRLWNYVSTF 1200
LTS +F + S+ Q IGRRI ++L E E L+ + R M N S F
Sbjct: 971 ILTSDIFKFDWYIRSRTP---QEIGRRISTLLLAITREMEGPLHGKKRKAMGESNNSSRF 1027
Query: 1201 -----SNLSGEK 1207
S+++GEK
Sbjct: 1028 GSVEPSSINGEK 1039
Score = 39 (18.8 bits), Expect = 1.5e-128, Sum P(3) = 1.5e-128
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 880 PKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQF 922
PK P + A++L+ +E QL K+ Y+ + F
Sbjct: 742 PKAPKSYNVQDHQFFADELVTLLEREQLAFKKEISYQYSVDDF 784
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 1207 (429.9 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
Identities = 251/566 (44%), Positives = 372/566 (65%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ +Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ +
Sbjct: 120 SVGDYRHRRTEQEEDEELLSESRKTSNVCVR-FEVSPSYVKGGPLRDYQIRGLNWLISLY 178
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++++LG+L++ + PGP +V+VP STL NW EF++W+P++
Sbjct: 179 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNFPGPHMVLVPKSTLHNWMNEFKRWVPSL 238
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
VI +VG + R F D+ + P +++ +T+YE+V+K+K+V K W YL++D
Sbjct: 239 RVICFVGDKDVRAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVID 291
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L + EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF
Sbjct: 292 EAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSW 351
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q+++Y IL
Sbjct: 352 FDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL 411
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILS 491
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T E I+ +
Sbjct: 412 MKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD-------EHIVSN 464
Query: 492 SGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELR--- 548
SGK+V LDKLL R+ E RVLIFSQM R+LDIL +Y ++G+++ RLDG T E R
Sbjct: 465 SGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEERENL 524
Query: 549 --H-------QAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA 599
H +A++ FNAP S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ DLQA
Sbjct: 525 FLHKHNLFSTEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQA 584
Query: 600 MSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKG 659
M RAHRIGQ++ V ++R +T +VEE I+ERA+ K+ LD +VIQ+ K ++
Sbjct: 585 MDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKE- 643
Query: 660 NELSAILRFGAEELF--KEDR-NDEE 682
E+ ++R GA +F KE DE+
Sbjct: 644 -EMLQMIRHGATHVFACKESELTDED 668
Score = 75 (31.5 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
Identities = 33/150 (22%), Positives = 67/150 (44%)
Query: 776 KGSELQEPQ-ERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFG 834
+ EL P + +++K + + P P ++ + N +KRD +F +A K+G
Sbjct: 797 RNPELPNPAIAQREEQKKIDGAEPLTPQESEEKDKLLTQGFTNWTKRDFNQFIKANEKYG 856
Query: 835 NQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVK 894
+ I +AR+ G +P+EV+ E + + C E ++ K ++ ++
Sbjct: 857 -RDDIDNVAREVEGK---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ 907
Query: 895 ANDLINRVEELQLLAKRISRYEDPIKQFRV 924
R+ + L +I+RY+ P Q R+
Sbjct: 908 -----RRISIKKALDAKIARYKAPFHQLRI 932
Score = 64 (27.6 bits), Expect = 2.4e-127, Sum P(2) = 2.4e-127
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 909 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 962
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 963 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 1002
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 1197 (426.4 bits), Expect = 4.3e-128, Sum P(2) = 4.3e-128
Identities = 246/543 (45%), Positives = 365/543 (67%)
Query: 146 EQGKMVDLQRKKGKAS--LRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADE 203
EQ + +L + KA+ + D+ P +++ GKLRDYQ+ GLN+L++ + N N ILADE
Sbjct: 130 EQEEDEELLSENSKATSVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADE 189
Query: 204 MGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRAS 263
MGLGKT+Q++S+LG++++ + IPGP +V+VP STL NW EF++W+P++ + +G R
Sbjct: 190 MGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIGDREE 249
Query: 264 REVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQ 323
R F D + P +++ +T+YE+++ ++AV K W YL++DEAHR+KN +++
Sbjct: 250 RTA-----FIRDTLL--PGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSK 302
Query: 324 LYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENE 383
L + EF T N+LL+TGTPLQN++ ELWALL+FL D F S +DF + + + +
Sbjct: 303 LSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCLGDTK 362
Query: 384 LAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGV 442
L LH LRP +LRRI DVEKSL PK E + V +S +Q+++Y IL ++ LN
Sbjct: 363 LVERLHTVLRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSAG 422
Query: 443 RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLL 502
+ +++ LLN++++L+KCCNHP+LF+ A+ G T ++ ++++SGK+V+LDKLL
Sbjct: 423 KMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLH-------LVVNSGKMVVLDKLL 475
Query: 503 VRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSED 562
+L E RVLIFSQM R+LDIL +Y ++ + + RLDG T E R +++ FN P S
Sbjct: 476 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSK 535
Query: 563 FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKS 622
F F+LSTRAGGLGINLATAD VII+DSDWNPQ DLQAM RAHRIGQ++ V ++RF+T +
Sbjct: 536 FLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNT 595
Query: 623 VEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELF--KEDR-N 679
VEE I+ERA+ K+ LD +VIQ+ K + +E+ +I+R GA +F KE
Sbjct: 596 VEERIVERAEMKLRLDSIVIQQGRLVDPSMNKLGK--DEMLSIIRHGATHVFASKESEIT 653
Query: 680 DEE 682
DE+
Sbjct: 654 DED 656
Score = 81 (33.6 bits), Expect = 4.3e-128, Sum P(2) = 4.3e-128
Identities = 48/186 (25%), Positives = 82/186 (44%)
Query: 819 SKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSP 878
+KRD +F +A K+G + I IAR+ G P+EV+ E + + C E ++
Sbjct: 828 TKRDFNQFIKANEKWG-RDDIENIAREVEGKT---PEEVM-EYSAVFWERCNELQDI--- 879
Query: 879 DPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCG 938
K ++ ++ R+ + L +I RY+ P Q R+ SY +KG
Sbjct: 880 -EKIMAQIERGEARIQ-----RRISIKKALDSKIGRYKAPFHQLRI-SY----GTNKGKN 928
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPR--APNLKERA 996
+ + +D L+ +H GF E++ DE L + I + FL A L+ R
Sbjct: 929 YTEEEDRFLICMLHKLGFDK-ESV-YDE---LRQCIRNSPQFRFDWFLKSRTAMELQRRC 983
Query: 997 NALLEM 1002
N L+ +
Sbjct: 984 NTLITL 989
Score = 50 (22.7 bits), Expect = 8.1e-125, Sum P(2) = 8.1e-125
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 832 KFGNQSQISLIARDAGGAVATAPQEVVVELFD-ILIDGCREAVEVGSPDPK-GPPLLDFF 889
K G +S+I A A+ E+ E D IL G R+ +E+ G L F
Sbjct: 627 KLGKDEMLSIIRHGATHVFASKESEITDEDIDGILERGERKTMEMKEKMANLGEGSLRNF 686
Query: 890 GVSVKANDLIN-RVEELQLLAKRISRYEDPIKQFRVLSY 927
+ + N + N E+ + K ++ + +P K+ R +Y
Sbjct: 687 TMDTE-NSVYNFEGEDYREKKKVVTNWIEPPKRERKANY 724
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
Identities = 251/556 (45%), Positives = 372/556 (66%)
Query: 136 EYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRND 195
+Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ + N
Sbjct: 146 DYRHRRTEQEEDEELLSESRKTSNVCVR-FEVSPSYVKGGPLRDYQIRGLNWLISLYENG 204
Query: 196 TNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVI 255
N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++ VI
Sbjct: 205 VNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVI 264
Query: 256 VYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAH 315
+VG + +R F D+ + P +++ +T+YE+V+K+K+V K W YL++DEAH
Sbjct: 265 CFVGDKDARAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAH 317
Query: 316 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKN 375
R+KN +++L + EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF +
Sbjct: 318 RIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT 377
Query: 376 LSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 434
+ + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q+++Y IL ++
Sbjct: 378 KNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKD 437
Query: 435 FHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGK 494
LN + +++ LLNI+++L+KCCNHP+LF+ A+ G T E I+ +SGK
Sbjct: 438 IDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD-------EHIVSNSGK 490
Query: 495 LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDH 554
+V+LDKLL +L E RVLIFSQM R+LDIL +Y ++G+++ RLDG T E R +A++
Sbjct: 491 MVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEA 550
Query: 555 FNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNI 614
FN P S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ DLQAM RAHRIGQ++ V +
Sbjct: 551 FNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRV 610
Query: 615 YRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELF 674
+R +T +VEE I+ERA+ K+ LD +VIQ+ K ++ E+ ++R GA +F
Sbjct: 611 FRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKE--EMLQMIRHGATHVF 668
Query: 675 --KEDRNDEESKKRLL 688
KE +E LL
Sbjct: 669 ASKESELTDEDITTLL 684
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 1239 (441.2 bits), Expect = 3.7e-126, P = 3.7e-126
Identities = 273/669 (40%), Positives = 406/669 (60%)
Query: 147 QGKMVDLQR-KKGKASL-RKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEM 204
Q + +L+R + +AS +KL+ E+ +LR+YQLEG+N+L+ +W N N ILADEM
Sbjct: 5 QSRHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEM 64
Query: 205 GLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASR 264
GLGKT+QS++ L + N I GPFLV+ PLST++NW +EF W MN IVY G+ ASR
Sbjct: 65 GLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWTE-MNTIVYHGSLASR 122
Query: 265 EVCQQYEFYNDKKVGRPI----KFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNS 320
++ QQYE Y GR I KF+ L+TT+E++L D L +I+W +++DEAHRLKN
Sbjct: 123 QMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNR 182
Query: 321 EAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFN 380
+L +L ++K+L+TGTPLQN+VEEL++LLHFL+ +F S+ +F++++ +L +
Sbjct: 183 NCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKT-- 240
Query: 381 ENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNK 440
E ++ L L+P +LRR+ +DVEK+L PK E I+ VE++ +QK+YY+ ILE+NF L+K
Sbjct: 241 EEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSK 300
Query: 441 GV-RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTS-----INDTSKLERIILSSGK 494
G N +LLN ++EL+KCCNHP+L A+ + I L+ ++ S+GK
Sbjct: 301 GAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGK 360
Query: 495 LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDH 554
LV++DKLL +L H+VLIFSQMVR LDIL +Y+ + + ++R+DG + LR A+D
Sbjct: 361 LVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDR 420
Query: 555 FNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNI 614
F+ P S+ F FLL TRAGGLGINL ADT IIFDSDWNPQNDLQA +R HRIGQ + V +
Sbjct: 421 FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKV 480
Query: 615 YRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA-EGSWRRKKQRKGNELSAILRFGAEEL 673
YR +T S E ++ ++A K+ LD V+Q ++ +G+ +Q E+ +LR GA
Sbjct: 481 YRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAA 540
Query: 674 FKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVA-NFCGAE-DDG 731
E+ +DE SK DID ++F + N DD
Sbjct: 541 IMEE-DDEGSK--FCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDP 597
Query: 732 SFWSRWIKPEAV----AQAEDALA---PRAARNTKSYAEANEPERSNKRKKKGSELQEPQ 784
+FW +W K + +++ L PR + T+ ++ + + + + + P+
Sbjct: 598 NFWQKWAKKADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPR 657
Query: 785 ERVHKRRKA 793
R H R A
Sbjct: 658 SRRHDRHHA 666
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 1186 (422.6 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
Identities = 246/549 (44%), Positives = 357/549 (65%)
Query: 138 KAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTN 197
+ R E +++ ++ G A E P +++G +RDYQ+ GLN+L++ N +
Sbjct: 149 RVRRTEAEEDAELLKDEKHGGSAET-VFRESPAFIQG-TMRDYQIAGLNWLISLHENGIS 206
Query: 198 VILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVY 257
ILADEMGLGKT+Q++S LG+L++ I GP LV+VP STL NW +EF KW P +NV+V
Sbjct: 207 GILADEMGLGKTLQTISFLGYLRHIMGITGPHLVIVPKSTLDNWKREFGKWTPEVNVLVL 266
Query: 258 VGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRL 317
G + R ++ F+ +T+YE++L++K+ L K W Y+++DEAHR+
Sbjct: 267 QGAKEERAALIAERLVDES-------FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRI 319
Query: 318 KNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLS 377
KN E+ L + F+++N+LLITGTPLQN++ ELWALL+FL D F + F Q +
Sbjct: 320 KNEESSLAQVIRLFNSRNRLLITGTPLQNNIHELWALLNFLLPDVFGDSEAFDQWFSGEG 379
Query: 378 SFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHD 437
++ + LH LRP +LRR+ DVEKSL PK E L ++M+ +Q+ +Y+ ILE++
Sbjct: 380 QDSDTVVQQLHRVLRPFLLRRVKADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDA 439
Query: 438 LN--KGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKL 495
+N G R ++ LLNIV++L+KCCNHP+LFE A+ G T E ++ +SGK+
Sbjct: 440 VNGANGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD-------EHLVYNSGKM 492
Query: 496 VILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHF 555
V+LDKLL RL RVLIFSQM R+LDIL +Y ++ +++ R+DG T E R A+D +
Sbjct: 493 VVLDKLLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDGGTAHEDRIAAIDEY 552
Query: 556 NAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIY 615
N PGSE F FLL+TRAGGLGINL TAD VI+FDSDWNPQ DLQAM RAHRIGQ + V +Y
Sbjct: 553 NKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVYVY 612
Query: 616 RFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFK 675
RF+ ++EE +LERA +K+ LD LVIQ+ A+ + K +EL ++++ GA ++F
Sbjct: 613 RFLVDNTIEEKVLERAAQKLHLDRLVIQQGRAQVA--AKAAANKDELLSMIQHGAAKVFN 670
Query: 676 EDRNDEESK 684
+D + + K
Sbjct: 671 KDSDGDVVK 679
Score = 65 (27.9 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
Identities = 40/159 (25%), Positives = 67/159 (42%)
Query: 899 INRVE-ELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGF- 956
+ ++E + ++L K++S+Y P++Q ++ +Y S +K + + +D LL+ + HG
Sbjct: 934 LRKIEHQRKMLRKKMSQYRVPLQQLKI-NY-SVSTTNKKV-YTEEEDRFLLVQLDKHGID 990
Query: 957 --GNWENIRLDERLGLTKKIAPVELQHHETF-LPRAPN-LKERANALLEM---ELXXXXX 1009
G +E IR DE I L + F L R P L RA LL E
Sbjct: 991 SDGIFETIR-DE-------IRDSALFRFDWFFLSRTPTELSRRATTLLTTIVKEFDDMNT 1042
Query: 1010 XXXXXXXXRKASKKGREKSENILNMPISRLKRDKKGKPG 1048
+K+ + EN + + KK K G
Sbjct: 1043 TKGTNGTANGRAKRDVDDEENDEDSILGMAPPKKKAKNG 1081
Score = 41 (19.5 bits), Expect = 1.1e-122, Sum P(2) = 1.1e-122
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERLGLT 971
WN+ D + + G H G ++E I E +G T
Sbjct: 868 WNRRDFQQFVNGCHKFGRNDFEGIAT-EVVGKT 899
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 1187 (422.9 bits), Expect = 7.3e-125, Sum P(3) = 7.3e-125
Identities = 261/602 (43%), Positives = 381/602 (63%)
Query: 98 DSSGNVTQ-EYLVKWKGL--SYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQ 154
D G + E+L+ GL + E+ KD D ++E KA +GK D++
Sbjct: 101 DLEGTTKRFEHLLSLSGLFKHFIESKAAKDPKFRQVLDVLEENKANGKG---KGKHQDVR 157
Query: 155 RKKGK----ASLRKLD-------------EQPEWLRGGKLRDYQLEGLNFLVNSWRNDTN 197
R+K + A L K + E P ++ G +LR YQ++G+N+LV+ +N
Sbjct: 158 RRKTEHEEDAELLKEEDSDDDESIEFQFRESPAYVNG-QLRPYQIQGVNWLVSLHKNKIA 216
Query: 198 VILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVY 257
ILADEMGLGKT+Q++S LG+L+ ++IPGPFLV+ P STL+NW +E +W P +N +
Sbjct: 217 GILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFIL 276
Query: 258 VGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRL 317
G + R E K +G F+ ++ +YE+++++K+ L KI W Y+++DEAHR+
Sbjct: 277 QGDKEERA-----ELIQKKLLG--CDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRI 329
Query: 318 KNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLS 377
KN E+ L L EF+++N+LLITGTPLQN++ ELWALL+FL D F DF + + S
Sbjct: 330 KNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSES 389
Query: 378 SFNENE--LANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 435
+ + + + LH L+P +LRRI DVE SL PK E L V MS +QK++YK ILE++
Sbjct: 390 TEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDL 449
Query: 436 HDLN--KGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSG 493
+N G + ++ LLNI+++L+KCCNHP+LF+ A+ G T E ++ ++
Sbjct: 450 DAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTD-------EHLVYNAA 502
Query: 494 KLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMD 553
KL +LDKLL +L E RVLIFSQM R+LDIL +Y ++ +++ R+DGST E R QA+D
Sbjct: 503 KLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAID 562
Query: 554 HFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVN 613
+NAP S+ F FLL+TRAGGLGINL +AD V+++DSDWNPQ DLQAM RAHRIGQ++ V
Sbjct: 563 DYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVK 622
Query: 614 IYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEEL 673
++R VT SVEE ILERA +K+ LD LVIQ+ + K + L ++++ GA ++
Sbjct: 623 VFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMIQHGAADV 682
Query: 674 FK 675
FK
Sbjct: 683 FK 684
Score = 38 (18.4 bits), Expect = 7.3e-125, Sum P(3) = 7.3e-125
Identities = 21/89 (23%), Positives = 36/89 (40%)
Query: 966 ERLGLTKKIAPVELQHHETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXRKAS--KK 1023
ER ++ + +Q + T L + N + +ALL M A +
Sbjct: 638 ERATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMIQHGAADVFKSGTSTGSAGTPEP 697
Query: 1024 GR-EKSENILNMPISRLKRDKKGKPGSAK 1051
G EK ++I ++ LK + K K +AK
Sbjct: 698 GSGEKGDDI-DLDELLLKSENKTKSLNAK 725
Score = 38 (18.4 bits), Expect = 1.7e-122, Sum P(2) = 1.7e-122
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 899 INRVEELQLLAKRISRYEDPIKQFRV 924
I R+E+ + K I E+ IK+ ++
Sbjct: 934 IERIEDYEKYLKIIENEEEKIKRVKM 959
Score = 37 (18.1 bits), Expect = 7.3e-125, Sum P(3) = 7.3e-125
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 1069 QPLTKEEGEMSDNEE 1083
QPLT+EE +M + E
Sbjct: 866 QPLTEEEEKMKADWE 880
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 1174 (418.3 bits), Expect = 4.0e-121, Sum P(2) = 4.0e-121
Identities = 246/546 (45%), Positives = 365/546 (66%)
Query: 131 QDAID-EYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLV 189
++ ID +++ R+ E +MV K + D+ P ++ G++RDYQ+ GLN+L
Sbjct: 87 KNGIDGDHRHRKTEQEEDEEMVADAIKSDDLVI--FDKSPFYIENGEMRDYQVRGLNWLA 144
Query: 190 NSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWL 249
+ N N ILADEMGLGKT+Q++SM+G++++ + P LV+VP STL NWA EF+KW
Sbjct: 145 SLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKWC 204
Query: 250 PTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYL 309
P++N +V +G A+R + D V P KF+ TTYE++LK K L K+ W Y+
Sbjct: 205 PSINAVVLIGDEAARN-----QVLRD--VILPQKFDVCCTTYEMMLKVKTQLKKLNWRYI 257
Query: 310 MVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF 369
++DEAHR+KN +++L T+ E +++N+LLITGTPLQN++ ELWALL+FL D F S DDF
Sbjct: 258 IIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDF 317
Query: 370 IQNYKN-LSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
+ N S N + + LH L+P +LRRI DVEKSL PK E + V +S +Q+++Y
Sbjct: 318 DSWFSNDAMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYT 377
Query: 429 WILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERI 488
+L ++ +N + + L+NI++ L+KC NHP+LF+ A+ G T + +
Sbjct: 378 KVLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPGPPFTTD-------QHL 430
Query: 489 ILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELR 548
+ +SGK+V+LDKLL++ E RVLIFSQ RMLD+L ++ ++ +++ RLDGST E R
Sbjct: 431 VDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDR 490
Query: 549 HQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQ 608
A++ +NAP S+ F F+L+TRAGGLGINLATAD VII+DSDWNPQ+DLQAM RAHRIGQ
Sbjct: 491 SNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQ 550
Query: 609 QEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRF 668
++ V ++R +T +V+E I+E+A+ K+ LD++VIQ+ S +K KG+ +S I R
Sbjct: 551 KKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQ--GRMSEAQKTLGKGDMISMI-RH 607
Query: 669 GAEELF 674
GAE++F
Sbjct: 608 GAEQVF 613
Score = 38 (18.4 bits), Expect = 4.0e-121, Sum P(2) = 4.0e-121
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 810 VRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARD 845
V DW+ KR+ +F R K+G + + IA++
Sbjct: 799 VTDWT-----KREFQQFVRGNEKYGRED-LESIAKE 828
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 1079 (384.9 bits), Expect = 5.1e-121, Sum P(4) = 5.1e-121
Identities = 259/648 (39%), Positives = 389/648 (60%)
Query: 58 FRKMVSREEIELNDVSKEMDLDIIKQNSQVERI-IADRISKDSSGNVTQEYLVKWKGLSY 116
+ + +EE + + + L +K+N + + + D+ +KD+ +T +L++ Y
Sbjct: 303 YHSHIEKEEQRRAERNAKQRLQALKENDEEAYLKLIDQ-AKDT--RIT--HLLRQTD-HY 356
Query: 117 AE--ATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKL-DEQPEWLR 173
+ A K + F + A DE R E + +D ++R++ EQP L
Sbjct: 357 LDSLAAAVKVQQSQFGESAYDEDMDRRMN-PEDDRKIDYYNVAH--NIREVVTEQPSILV 413
Query: 174 GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVV 233
GGKL++YQL GL ++++ + N N ILADEMGLGKT+Q++S++ L ++ GPFLV+V
Sbjct: 414 GGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIV 473
Query: 234 PLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEV 293
PLSTL+NW EF +W P++ IVY G R+ +V R F LLTTYE
Sbjct: 474 PLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHP-------QV-RHSNFQVLLTTYEY 525
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEF-STKNKLLITGTPLQNSVEELW 352
++KD+ +LS+IKW Y+++DE HR+KN++++L TL+ + S++ +L++TGTPLQN++ ELW
Sbjct: 526 IIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELW 585
Query: 353 ALLHFL---DHDKFKSKDDFIQN-YKNLSSFNENELAN---------LHMELRPHILRRI 399
ALL+F+ + KS D++ + N ++ EL LH LRP +LRR+
Sbjct: 586 ALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRL 645
Query: 400 IKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF---HDLNKGVRGNQVSLLNIVVEL 456
KDVE LP K+E+++R +MS LQ++ Y + + D +G G + L N V++L
Sbjct: 646 KKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIK-GLQNTVMQL 704
Query: 457 KKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFS 516
KK CNHPF+FE + T N L R+ SGK +LD++L +L + HR+L+F
Sbjct: 705 KKICNHPFVFEDVERSID-PTGFN-YDMLWRV---SGKFELLDRILPKLFRSGHRILMFF 759
Query: 517 QMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGI 576
QM ++++I+ +Y+ Y+ +++ RLDGSTKA+ R + + FN P +E FLLSTRAGGLG+
Sbjct: 760 QMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGL 819
Query: 577 NLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMV 636
NL TADTVIIFDSDWNP DLQA RAHRIGQ + V IYR +T KSVEE+IL RA+ K+
Sbjct: 820 NLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLD 879
Query: 637 LDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESK 684
+D VIQ G + K + E A LR E E+ NDE+ +
Sbjct: 880 IDGKVIQA----GKFDNKSTPEERE--AFLRSLLENENGEEENDEKGE 921
Score = 62 (26.9 bits), Expect = 5.1e-121, Sum P(4) = 5.1e-121
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 29 QWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVE 88
Q + + + Q +S + N + + D+ V R+ EL D ++ ++LD IK+N+ VE
Sbjct: 142 QQRKYLQYQ-ISEDDAIKNRMFRRMSDLESYPAVMRDVAELKDDNERLNLDTIKRNALVE 200
Score = 54 (24.1 bits), Expect = 5.1e-121, Sum P(4) = 5.1e-121
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 1252 ERQKGHKNVSTYQMTEPIHKGI---DPKKFEAWKRRRR--AETDMYSQAQPMLQRPMNNG 1306
+R++ K Q EP+ +G P ++ R + AE DM S+A+P RP N
Sbjct: 974 QREEPEKTTDLLQ-EEPLGRGARRRTPVVYDEAVRDAQWMAEMDMESEARPTRGRPKRNI 1032
Query: 1307 TRLPDPNSLGILG 1319
+ + +L + G
Sbjct: 1033 ASVDETPALTLNG 1045
Score = 41 (19.5 bits), Expect = 5.1e-121, Sum P(4) = 5.1e-121
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 641 VIQKLNAEGSWRRKKQRKGNELSAILRFGAEEL--FKEDRNDEE 682
+++ N E K + +EL+ IL G +EL FK+ D E
Sbjct: 906 LLENENGEEENDEKGELDDDELNEILARGDDELRLFKQMTEDLE 949
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 1080 (385.2 bits), Expect = 1.5e-119, Sum P(4) = 1.5e-119
Identities = 237/538 (44%), Positives = 336/538 (62%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY +A +A +G + A ++D+Q + G L+ YQ++G
Sbjct: 505 IIENAKQDVDDEYGVSQA-LA-RG--LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKG 560
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VPLSTLSNWA E
Sbjct: 561 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYE 620
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN LLTTYE ++KDK +L+KI
Sbjct: 621 FDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYIIKDKHILAKI 672
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+FL F
Sbjct: 673 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 732
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 733 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 792
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 793 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 852
Query: 468 SADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIL 525
+ + L+ + +SGK +LD++L +L T H+VL+F QM ++ I+
Sbjct: 853 HIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 911
Query: 526 AEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVI 585
+Y +Y+GF++ RLDG+TKAE R + FN PGSE F FLLSTRAGGLG+NL +ADTVI
Sbjct: 912 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 971
Query: 586 IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 972 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ 1029
Score = 53 (23.7 bits), Expect = 1.5e-119, Sum P(4) = 1.5e-119
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+KD+ + + DEY A + Q K + ++K K +K E E
Sbjct: 344 KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAE 392
Score = 52 (23.4 bits), Expect = 1.5e-119, Sum P(4) = 1.5e-119
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 1067 VEQPLTKEEGEMSDNEEVYEQFKEVK-----WMEWCEDVMADEIRTLQRLQRLQATSDNL 1121
+E+P KEE E+ D+E V + + +M D +E R +R RL D L
Sbjct: 1084 LEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLME-EDEL 1142
Query: 1122 P 1122
P
Sbjct: 1143 P 1143
Score = 39 (18.8 bits), Expect = 2.2e-115, Sum P(3) = 2.2e-115
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQEPQERV 787
T S ++ E S K+KK+G + P E++
Sbjct: 1228 TTSTRSRDKDEESKKQKKRG---RPPAEKL 1254
Score = 37 (18.1 bits), Expect = 1.5e-119, Sum P(4) = 1.5e-119
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 1179 HEEELYKQDRMTMRLWNYVSTFSNLSG------EKLHQIYSKLKQERQEEAG 1224
H +E+ D +T + W + G E++ Q S K++R EAG
Sbjct: 1172 HRKEVDYSDSLTEKQWLKQLKAAIEEGTLEEIEEEVRQKKSSRKRKRDSEAG 1223
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 1019 (363.8 bits), Expect = 2.7e-118, Sum P(4) = 2.7e-118
Identities = 215/483 (44%), Positives = 320/483 (66%)
Query: 211 QSVSMLGFLQNA-QQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQ 269
+++ + FL + ++ P LVV PLST+ NW +EF W P MNV++Y G +R+V +
Sbjct: 256 KTIQSIAFLASLFEENLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWE 315
Query: 270 YEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
+EFY + GR KF+ LLTTYE+V +VLS IKW +++DE HRLKN +++LY++LS
Sbjct: 316 HEFYFSE--GRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLS 373
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHM 389
+F++K+ +L+TGTPLQN++ EL+AL+HFLD DKF S ++ +++++ E +++ LH
Sbjct: 374 QFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGS----LEKFQDINK--EEQISRLHQ 427
Query: 390 ELRPHILRRIIKDVEKS-LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVS 448
L PH+LRR+ KDV K +PPK E ILRV+MS QK+ YK ++ N+ L K R ++S
Sbjct: 428 MLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKK-RDAKIS 486
Query: 449 LLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
N++++L++ C+HP+L + + D + T LE +SGKL +LDK++V+L E
Sbjct: 487 --NVLMKLRQVCSHPYLLPDFEPRFE-DANEAFTKLLE----ASGKLQLLDKMMVKLKEQ 539
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
HRVLI++Q L +L +Y ++K + ++R+DG R +D FNA S FCFLLS
Sbjct: 540 GHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLS 599
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRAGG+GINLATADTVII+DSDWNP DLQAM+R HR+GQ V IYR + +VEE ++
Sbjct: 600 TRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMM 659
Query: 629 ERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLL 688
E K KM+L+HLV+ G K+ +EL I+++G++ELF E+ NDE + +
Sbjct: 660 EITKNKMLLEHLVV------G----KQHLCQDELDDIIKYGSKELFSEE-NDEAGRSGKI 708
Query: 689 GMD 691
D
Sbjct: 709 HYD 711
Score = 843 (301.8 bits), Expect = 1.7e-85, Sum P(3) = 1.7e-85
Identities = 190/453 (41%), Positives = 287/453 (63%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSK 74
++L+KWKG S+LHC W E + +K + K + RF + ++ + +
Sbjct: 78 QYLVKWKGLSYLHCSWVPEQEFEK--AYKSH-PHLKLKLRVTRFNAAM---DVFIAENGA 131
Query: 75 EMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKD-EIIDFAQDA 133
+ I + V+RIIA R D +EYLVK+K LSY + WE + +I DF Q+
Sbjct: 132 HEFIAIRPEWKTVDRIIACREGDDG-----EEYLVKYKELSYRNSYWESESDISDF-QNE 185
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
I +K ++ + + K V+ +R + + ++ D PE+L G L YQLEGLNFL SW
Sbjct: 186 IQRFKDINSS-SRRDKYVENERNREE--FKQFDLTPEFLTG-TLHTYQLEGLNFLRYSWS 241
Query: 194 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
TNVILADEMGLGKT+QS++ L L ++ P LVV PLST+ NW +EF W P MN
Sbjct: 242 KKTNVILADEMGLGKTIQSIAFLASL--FEENLSPHLVVAPLSTIRNWEREFATWAPHMN 299
Query: 254 VIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDE 313
V++Y G +R+V ++EFY + GR KF+ LLTTYE+V +VLS IKW +++DE
Sbjct: 300 VVMYTGDSEARDVIWEHEFYFSE--GRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDE 357
Query: 314 AHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNY 373
HRLKN +++LY++LS+F++K+ +L+TGTPLQN++ EL+AL+HFLD DKF S ++ +
Sbjct: 358 GHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGS----LEKF 413
Query: 374 KNLSSFNENELANLHMELRPHILRRIIKDVEKS-LPPKIERILRVEMSPLQKQYYKWILE 432
++++ E +++ LH L PH+LRR+ KDV K +PPK E ILRV+MS QK+ YK ++
Sbjct: 414 QDINK--EEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVIT 471
Query: 433 RNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFL 465
N+ L K R ++S N++++L++ C+HP+L
Sbjct: 472 NNYQVLTKK-RDAKIS--NVLMKLRQVCSHPYL 501
Score = 76 (31.8 bits), Expect = 2.7e-118, Sum P(4) = 2.7e-118
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 103 VTQEYLVKWKGLSYAEATWEKDE 125
V ++YLVKWKGLSY +W ++
Sbjct: 75 VVKQYLVKWKGLSYLHCSWVPEQ 97
Score = 63 (27.2 bits), Expect = 2.7e-118, Sum P(4) = 2.7e-118
Identities = 34/163 (20%), Positives = 63/163 (38%)
Query: 932 NWSKGCGWNQFDDARLLLGIHYHGFGNWENIRLDERLGLTKKIAPVELQHHETFLPRAPN 991
N G + D L+ + HG+G W I DE +G +++A +L +P P+
Sbjct: 1005 NLRNGAFSKEEHDRILIPAVSKHGYGRWVAIVEDEEIGF-QEVACKDLN-----IPFPPD 1058
Query: 992 LKERANALLEMELXXXXXXXXXXXXXRKASKKGRE--KSENILNMPISRLKRDKKGKPGS 1049
K + + + A K E K+E + K K P +
Sbjct: 1059 TKSARKRICD-HVGKRVKKMEDAIKYEYAEKILAEQAKAETKGTSFVDAEKEMLKNDPIT 1117
Query: 1050 AKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
+K N T D +K RVE + ++ + E ++ + +++
Sbjct: 1118 SKKNSATAVD--NKQGRVEMAQSYDQSVNEKSGESFQTYLDIQ 1158
Score = 62 (26.9 bits), Expect = 9.1e-84, Sum P(2) = 9.1e-84
Identities = 34/145 (23%), Positives = 59/145 (40%)
Query: 1155 IQVLSKIRNYLQLIGRRIDQIVLEHEEELYK-QDRMTMRLWNYVSTFSNLSGEKLHQIYS 1213
+Q+L K+ L+ G R+ I + + LY +D T + WNY +SG +
Sbjct: 526 LQLLDKMMVKLKEQGHRV-LIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRID 584
Query: 1214 KLKQERQEEAGIGPSHINGSAS---GSIDNDLNF-STFNRHAERQ---KGHKNVSTYQMT 1266
+ E S G + D + + S +N HA+ Q + H+ T ++
Sbjct: 585 RFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVM 644
Query: 1267 --EPIHKG-IDPKKFEAWKRRRRAE 1288
IHKG ++ + E K + E
Sbjct: 645 IYRLIHKGTVEERMMEITKNKMLLE 669
Score = 52 (23.4 bits), Expect = 2.7e-118, Sum P(4) = 2.7e-118
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 763 EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRD 822
EA+EPE + +RK + + P R++A + +P ++G + + N ++RD
Sbjct: 844 EADEPEAARQRKPR--TVTRPY-----RKRARDNSEEIPLMEGEGRYLMVLGF-NETERD 895
Query: 823 ATRFYRAVMKFG 834
F R ++G
Sbjct: 896 I--FLRTFKRYG 905
Score = 43 (20.2 bits), Expect = 7.9e-115, Sum P(4) = 7.9e-115
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 128 DFAQDAIDEYKAREAAMAEQG 148
D+ +D +DEY RE + E G
Sbjct: 17 DYIEDKLDEY-IREEQVEETG 36
Score = 42 (19.8 bits), Expect = 4.3e-116, Sum P(4) = 4.3e-116
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 1177 LEHEEELYKQDRMTMRLWNYVSTFSNLSGE-KLHQIYSKLKQERQEEA 1223
++ E+E+ K D +T + N + N G ++ Q Y + E+ E+
Sbjct: 1104 VDAEKEMLKNDPITSKK-NSATAVDNKQGRVEMAQSYDQSVNEKSGES 1150
Score = 40 (19.1 bits), Expect = 5.0e-82, Sum P(3) = 5.0e-82
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 939 WNQFDDARLLLGIHYHGFGNWENIRLDERL 968
+ QF LL Y F NW R+D ++
Sbjct: 546 YTQFQHTLYLLE-DYFTFKNWNYERIDGKI 574
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 1078 (384.5 bits), Expect = 1.7e-117, Sum P(4) = 1.7e-117
Identities = 253/600 (42%), Positives = 359/600 (59%)
Query: 117 AEATWEKD--EIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
+E EKD +II+ A QD DEY + +A Q A ++++Q L
Sbjct: 673 SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYT-----VAHAISERVEKQSALLI 727
Query: 174 GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVV 233
G L+ YQL+GL ++V+ + N+ N ILADEMGLGKT+Q+++++ +L +++ GP+L++V
Sbjct: 728 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 787
Query: 234 PLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEV 293
PLSTLSNW EF KW P++ I Y GT A R + G KFN LLTTYE
Sbjct: 788 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRR-----SLVPQLRSG---KFNVLLTTYEY 839
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELW 352
++KDK +L+KI+W Y++VDE HR+KN +L L+ + ++L+TGTPLQN + ELW
Sbjct: 840 IIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELW 899
Query: 353 ALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIK 401
ALL+FL FKS F Q + NE E + LH LRP +LRR+ K
Sbjct: 900 ALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 959
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVEL 456
+VE LP K+E +++ +MS LQK Y K IL + + +K +G +L+N +++L
Sbjct: 960 EVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQL 1019
Query: 457 KKCCNHPFLF----ES-ADH-GYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKH 510
+K CNHP++F ES A+H GY IN ++L R +SGK +LD++L +L T H
Sbjct: 1020 RKICNHPYMFQHIEESFAEHLGYSNGV-ING-AELYR---ASGKFELLDRILPKLRATNH 1074
Query: 511 RVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTR 570
RVL+F QM ++ I+ +Y +++ F + RLDG+TK+E R + FN PGS+ F FLLSTR
Sbjct: 1075 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1134
Query: 571 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 630
AGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL
Sbjct: 1135 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1194
Query: 631 AKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
AK K+ +D VIQ G + +K L AIL E +++ D+E+ +++
Sbjct: 1195 AKYKLNVDQKVIQA----GMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMI 1250
Score = 44 (20.5 bits), Expect = 1.7e-117, Sum P(4) = 1.7e-117
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEEE ++D +
Sbjct: 1225 QAILEHEEENEEEDEV 1240
Score = 44 (20.5 bits), Expect = 1.7e-117, Sum P(4) = 1.7e-117
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 1252 ERQKGHKNVSTYQMTEPIHKGIDPKKFEAWKRRRRAETDMYSQAQPMLQRPMN 1304
+++K +NV +P+ + ++ K KRR R + S P L + MN
Sbjct: 1351 KKRKRRRNVDK----DPVKEDVEKAK----KRRGRPPAEKLSPNPPKLTKQMN 1395
Score = 41 (19.5 bits), Expect = 1.7e-117, Sum P(4) = 1.7e-117
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDL--QRKKGKASLRKLDEQPE 170
+KD + + DEY A + + K ++KK + +K +E E
Sbjct: 528 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRRKKAEENAE 578
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 1086 (387.4 bits), Expect = 2.7e-117, Sum P(4) = 2.7e-117
Identities = 245/585 (41%), Positives = 356/585 (60%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY +A +A +G + A ++D+Q + G L+ YQ++G
Sbjct: 706 IIENAKQDVDDEYGVSQA-LA-RG--LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKG 761
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VPLSTLSNWA E
Sbjct: 762 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYE 821
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN LLTTYE ++KDK +L+KI
Sbjct: 822 FDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYIIKDKHILAKI 873
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+FL F
Sbjct: 874 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 933
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 934 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 993
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 994 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1053
Query: 468 SADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIL 525
+ + L+ + +SGK +LD++L +L T H+VL+F QM ++ I+
Sbjct: 1054 HIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 1112
Query: 526 AEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVI 585
+Y +Y+GF++ RLDG+TKAE R + FN PGSE F FLLSTRAGGLG+NL +ADTVI
Sbjct: 1113 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 1172
Query: 586 IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKL 645
IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 1173 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA- 1231
Query: 646 NAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
G + +K L AIL ++ +++ D+E+ +++
Sbjct: 1232 ---GMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMI 1273
Score = 53 (23.7 bits), Expect = 2.7e-117, Sum P(4) = 2.7e-117
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+KD+ + + DEY A + Q K + ++K K +K E E
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAE 593
Score = 48 (22.0 bits), Expect = 2.7e-117, Sum P(4) = 2.7e-117
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P + K+ KK A + ++ + R ++ P KE E
Sbjct: 1405 KKQKKRGRPPAEKLSPNPPNLTKKMKKIV--DAVIKYKDSSGRQLSEVFIQLPSRKELPE 1462
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ FK++K E + + R+L L++
Sbjct: 1463 YYELIRKPVDFKKIK-----ERIRNHKYRSLNDLEK 1493
Score = 47 (21.6 bits), Expect = 3.5e-117, Sum P(4) = 3.5e-117
Identities = 18/80 (22%), Positives = 34/80 (42%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQE-----PQERVHKRRKAEFSVPSVPFIDGASAQVRD 812
T S ++ E S K+KK+G E P K +K +V + + D + Q+ +
Sbjct: 1392 TTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAV--IKYKDSSGRQLSE 1449
Query: 813 WSYGNLSKRDATRFYRAVMK 832
S+++ +Y + K
Sbjct: 1450 VFIQLPSRKELPEYYELIRK 1469
Score = 47 (21.6 bits), Expect = 5.2e-115, Sum P(3) = 5.2e-115
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 1179 HEEELYKQDRMTMRLWNYVSTFSNLSG--EKLHQIYSKLKQERQEEAG 1224
H +E+ D +T + W L E++ Q S K++R EAG
Sbjct: 1340 HRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSEAG 1387
Score = 40 (19.1 bits), Expect = 2.9e-114, Sum P(3) = 2.9e-114
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEE+ ++D +
Sbjct: 1248 QAILEHEEQDEEEDEV 1263
Score = 37 (18.1 bits), Expect = 2.7e-117, Sum P(4) = 2.7e-117
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 643 QKLNAEGSWRRKKQRKGNELS------AILRFGAEELFKEDRNDEESKKR 686
+K+ GS RK+ + L+ AI EE+ +E R + S+KR
Sbjct: 1331 EKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKR 1380
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 1086 (387.4 bits), Expect = 2.7e-117, Sum P(4) = 2.7e-117
Identities = 245/585 (41%), Positives = 356/585 (60%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY +A +A +G + A ++D+Q + G L+ YQ++G
Sbjct: 706 IIENAKQDVDDEYGVSQA-LA-RG--LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKG 761
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VPLSTLSNWA E
Sbjct: 762 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYE 821
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN LLTTYE ++KDK +L+KI
Sbjct: 822 FDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYIIKDKHILAKI 873
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+FL F
Sbjct: 874 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 933
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 934 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 993
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 994 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1053
Query: 468 SADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIL 525
+ + L+ + +SGK +LD++L +L T H+VL+F QM ++ I+
Sbjct: 1054 HIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 1112
Query: 526 AEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVI 585
+Y +Y+GF++ RLDG+TKAE R + FN PGSE F FLLSTRAGGLG+NL +ADTVI
Sbjct: 1113 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 1172
Query: 586 IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKL 645
IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 1173 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA- 1231
Query: 646 NAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
G + +K L AIL ++ +++ D+E+ +++
Sbjct: 1232 ---GMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMI 1273
Score = 53 (23.7 bits), Expect = 2.7e-117, Sum P(4) = 2.7e-117
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+KD+ + + DEY A + Q K + ++K K +K E E
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAE 593
Score = 48 (22.0 bits), Expect = 2.7e-117, Sum P(4) = 2.7e-117
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P + K+ KK A + ++ + R ++ P KE E
Sbjct: 1405 KKQKKRGRPPAEKLSPNPPNLTKKMKKIV--DAVIKYKDSSGRQLSEVFIQLPSRKELPE 1462
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ FK++K E + + R+L L++
Sbjct: 1463 YYELIRKPVDFKKIK-----ERIRNHKYRSLNDLEK 1493
Score = 47 (21.6 bits), Expect = 3.5e-117, Sum P(4) = 3.5e-117
Identities = 18/80 (22%), Positives = 34/80 (42%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQE-----PQERVHKRRKAEFSVPSVPFIDGASAQVRD 812
T S ++ E S K+KK+G E P K +K +V + + D + Q+ +
Sbjct: 1392 TTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAV--IKYKDSSGRQLSE 1449
Query: 813 WSYGNLSKRDATRFYRAVMK 832
S+++ +Y + K
Sbjct: 1450 VFIQLPSRKELPEYYELIRK 1469
Score = 47 (21.6 bits), Expect = 5.2e-115, Sum P(3) = 5.2e-115
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 1179 HEEELYKQDRMTMRLWNYVSTFSNLSG--EKLHQIYSKLKQERQEEAG 1224
H +E+ D +T + W L E++ Q S K++R EAG
Sbjct: 1340 HRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSEAG 1387
Score = 40 (19.1 bits), Expect = 2.9e-114, Sum P(3) = 2.9e-114
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEE+ ++D +
Sbjct: 1248 QAILEHEEQDEEEDEV 1263
Score = 37 (18.1 bits), Expect = 2.7e-117, Sum P(4) = 2.7e-117
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 643 QKLNAEGSWRRKKQRKGNELS------AILRFGAEELFKEDRNDEESKKR 686
+K+ GS RK+ + L+ AI EE+ +E R + S+KR
Sbjct: 1331 EKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKR 1380
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 1086 (387.4 bits), Expect = 5.8e-117, Sum P(4) = 5.8e-117
Identities = 245/585 (41%), Positives = 356/585 (60%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY +A +A +G + A ++D+Q + G L+ YQ++G
Sbjct: 706 IIENAKQDVDDEYGVSQA-LA-RG--LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKG 761
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VPLSTLSNWA E
Sbjct: 762 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYE 821
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN LLTTYE ++KDK +L+KI
Sbjct: 822 FDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYIIKDKHILAKI 873
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+FL F
Sbjct: 874 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 933
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 934 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 993
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 994 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1053
Query: 468 SADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIL 525
+ + L+ + +SGK +LD++L +L T H+VL+F QM ++ I+
Sbjct: 1054 HIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 1112
Query: 526 AEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVI 585
+Y +Y+GF++ RLDG+TKAE R + FN PGSE F FLLSTRAGGLG+NL +ADTVI
Sbjct: 1113 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 1172
Query: 586 IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKL 645
IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 1173 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA- 1231
Query: 646 NAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
G + +K L AIL ++ +++ D+E+ +++
Sbjct: 1232 ---GMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMI 1273
Score = 53 (23.7 bits), Expect = 5.8e-117, Sum P(4) = 5.8e-117
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+KD+ + + DEY A + Q K + ++K K +K E E
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAE 593
Score = 47 (21.6 bits), Expect = 5.4e-115, Sum P(3) = 5.4e-115
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 1179 HEEELYKQDRMTMRLWNYVSTFSNLSG--EKLHQIYSKLKQERQEEAG 1224
H +E+ D +T + W L E++ Q S K++R EAG
Sbjct: 1340 HRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSEAG 1387
Score = 45 (20.9 bits), Expect = 5.8e-117, Sum P(4) = 5.8e-117
Identities = 19/81 (23%), Positives = 35/81 (43%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQE-----PQERVHKRRKAEFSVPSVPFIDGASAQVRD 812
T S ++ E S K+KK+G E P K +K +V + + D +S +
Sbjct: 1392 TTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAV--IKYKDSSSGRQLS 1449
Query: 813 WSYGNL-SKRDATRFYRAVMK 832
+ L S+++ +Y + K
Sbjct: 1450 EVFIQLPSRKELPEYYELIRK 1470
Score = 43 (20.2 bits), Expect = 9.4e-117, Sum P(4) = 9.4e-117
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P + K+ KK K ++ R ++ P KE E
Sbjct: 1405 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYK-DSSSGRQLSEVFIQLPSRKELPE 1463
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ FK++K E + + R+L L++
Sbjct: 1464 YYELIRKPVDFKKIK-----ERIRNHKYRSLNDLEK 1494
Score = 40 (19.1 bits), Expect = 2.9e-114, Sum P(3) = 2.9e-114
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEE+ ++D +
Sbjct: 1248 QAILEHEEQDEEEDEV 1263
Score = 37 (18.1 bits), Expect = 5.8e-117, Sum P(4) = 5.8e-117
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 643 QKLNAEGSWRRKKQRKGNELS------AILRFGAEELFKEDRNDEESKKR 686
+K+ GS RK+ + L+ AI EE+ +E R + S+KR
Sbjct: 1331 EKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKR 1380
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 1086 (387.4 bits), Expect = 7.4e-117, Sum P(4) = 7.4e-117
Identities = 245/585 (41%), Positives = 356/585 (60%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY +A +A +G + A ++D+Q + G L+ YQ++G
Sbjct: 698 IIENAKQDVDDEYGVSQA-LA-RG--LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKG 753
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VPLSTLSNWA E
Sbjct: 754 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYE 813
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN LLTTYE ++KDK +L+KI
Sbjct: 814 FDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYIIKDKHILAKI 865
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+FL F
Sbjct: 866 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 925
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 926 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 985
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 986 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1045
Query: 468 SADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIL 525
+ + L+ + +SGK +LD++L +L T H+VL+F QM ++ I+
Sbjct: 1046 HIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 1104
Query: 526 AEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVI 585
+Y +Y+GF++ RLDG+TKAE R + FN PGSE F FLLSTRAGGLG+NL +ADTVI
Sbjct: 1105 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 1164
Query: 586 IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKL 645
IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 1165 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA- 1223
Query: 646 NAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
G + +K L AIL ++ +++ D+E+ +++
Sbjct: 1224 ---GMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMI 1265
Score = 53 (23.7 bits), Expect = 7.4e-117, Sum P(4) = 7.4e-117
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+KD+ + + DEY A + Q K + ++K K +K E E
Sbjct: 537 KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAE 585
Score = 44 (20.5 bits), Expect = 9.3e-115, Sum P(3) = 9.3e-115
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 1179 HEEELYKQDRMTMRLWNYVSTFSNLSG--EKLHQIYSKLKQERQEEAG 1224
H +E+ D +T + W L E++ Q S K++R +AG
Sbjct: 1332 HRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAG 1379
Score = 43 (20.2 bits), Expect = 7.4e-117, Sum P(4) = 7.4e-117
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P + K+ KK K ++ R ++ P KE E
Sbjct: 1397 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYK-DSSSGRQLSEVFIQLPSRKELPE 1455
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ FK++K E + + R+L L++
Sbjct: 1456 YYELIRKPVDFKKIK-----ERIRNHKYRSLNDLEK 1486
Score = 42 (19.8 bits), Expect = 9.5e-117, Sum P(4) = 9.5e-117
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQE-----PQERVHKRRKAEFSVPSVPFIDGASAQVRD 812
T S ++ + S K+KK+G E P K +K +V + + D +S +
Sbjct: 1384 TTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAV--IKYKDSSSGRQLS 1441
Query: 813 WSYGNL-SKRDATRFYRAVMK 832
+ L S+++ +Y + K
Sbjct: 1442 EVFIQLPSRKELPEYYELIRK 1462
Score = 40 (19.1 bits), Expect = 2.5e-114, Sum P(3) = 2.5e-114
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEE+ ++D +
Sbjct: 1240 QAILEHEEQDEEEDEV 1255
Score = 37 (18.1 bits), Expect = 7.4e-117, Sum P(4) = 7.4e-117
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 643 QKLNAEGSWRRKKQRKGNELS------AILRFGAEELFKEDRNDEESKKR 686
+K+ GS RK+ + L+ AI EE+ +E R + S+KR
Sbjct: 1323 EKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKR 1372
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 1081 (385.6 bits), Expect = 8.7e-117, Sum P(4) = 8.7e-117
Identities = 254/600 (42%), Positives = 359/600 (59%)
Query: 117 AEATWEKD--EIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
+E EKD +II+ A QD DEY + +A Q A ++++Q L
Sbjct: 640 SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYT-----VAHAITERVEKQSSLLI 694
Query: 174 GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVV 233
G L+ YQL+GL ++V+ + N+ N ILADEMGLGKT+Q+++++ +L +++ GP+L++V
Sbjct: 695 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 754
Query: 234 PLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEV 293
PLSTLSNW EF KW P++ I Y GT A R + G KFN LLTTYE
Sbjct: 755 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRR-----SLVPQLRSG---KFNVLLTTYEY 806
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELW 352
++KDK +L+KI+W Y++VDE HR+KN +L L+ + ++L+TGTPLQN + ELW
Sbjct: 807 IIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELW 866
Query: 353 ALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIK 401
ALL+FL FKS F Q + NE E + LH LRP +LRR+ K
Sbjct: 867 ALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 926
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVEL 456
+VE LP K+E +++ +MS LQK Y K IL + + +K +G +L+N +++L
Sbjct: 927 EVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQL 986
Query: 457 KKCCNHPFLF----ES-ADH-GYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKH 510
+K CNHP++F ES A+H GY IN ++L R +SGK +LD++L +L T H
Sbjct: 987 RKICNHPYMFQHIEESFAEHLGYSNGV-ING-AELYR---ASGKFELLDRILPKLRATNH 1041
Query: 511 RVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTR 570
RVL+F QM ++ I+ +Y +++ F + RLDG+TK+E R + FN PGS+ F FLLSTR
Sbjct: 1042 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1101
Query: 571 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 630
AGGLG+NL ADTVIIFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL
Sbjct: 1102 AGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1161
Query: 631 AKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
AK K+ +D VIQ G + +K L AIL E +++ D+E+ +++
Sbjct: 1162 AKYKLNVDQKVIQA----GMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMI 1217
Score = 46 (21.3 bits), Expect = 8.7e-117, Sum P(4) = 8.7e-117
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDL--QRKKGKASLRKLDEQPEWLRGG 175
+KD + + DEY A + + K ++KK + +K +E E + G
Sbjct: 494 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGMASG 549
Score = 44 (20.5 bits), Expect = 8.7e-117, Sum P(4) = 8.7e-117
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEEE ++D +
Sbjct: 1192 QAILEHEEENEEEDEV 1207
Score = 43 (20.2 bits), Expect = 4.8e-114, Sum P(3) = 4.8e-114
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 632 KKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEES 683
K M+L H Q N EGS + L ++ + +++ KE+ +++ES
Sbjct: 1425 KDVMLLCHNA-QTFNLEGS---QIYEDSIVLQSVFKSARQKIAKEEESEDES 1472
Score = 41 (19.5 bits), Expect = 7.8e-114, Sum P(3) = 7.8e-114
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFS 796
+ A+ +S E+N+ E + ++ SE + + ++ +K E S
Sbjct: 1461 KIAKEEESEDESNDDEDEDDEEESESESKSVKVKIKLNKKDEKS 1504
Score = 39 (18.8 bits), Expect = 8.7e-117, Sum P(4) = 8.7e-117
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 1279 EAWKRRRRAETDMYSQAQPMLQRPMN 1304
+A KRR R + S P L + MN
Sbjct: 1337 KAKKRRGRPPAEKLSPNPPKLTKQMN 1362
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 1086 (387.4 bits), Expect = 9.4e-117, Sum P(4) = 9.4e-117
Identities = 245/585 (41%), Positives = 356/585 (60%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY +A +A +G + A ++D+Q + G L+ YQ++G
Sbjct: 706 IIENAKQDVDDEYGVSQA-LA-RG--LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKG 761
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VPLSTLSNWA E
Sbjct: 762 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYE 821
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN LLTTYE ++KDK +L+KI
Sbjct: 822 FDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYIIKDKHILAKI 873
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+FL F
Sbjct: 874 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 933
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 934 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 993
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 994 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1053
Query: 468 SADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIL 525
+ + L+ + +SGK +LD++L +L T H+VL+F QM ++ I+
Sbjct: 1054 HIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 1112
Query: 526 AEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVI 585
+Y +Y+GF++ RLDG+TKAE R + FN PGSE F FLLSTRAGGLG+NL +ADTVI
Sbjct: 1113 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 1172
Query: 586 IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKL 645
IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 1173 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA- 1231
Query: 646 NAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
G + +K L AIL ++ +++ D+E+ +++
Sbjct: 1232 ---GMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMI 1273
Score = 53 (23.7 bits), Expect = 9.4e-117, Sum P(4) = 9.4e-117
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+KD+ + + DEY A + Q K + ++K K +K E E
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAE 593
Score = 43 (20.2 bits), Expect = 9.4e-117, Sum P(4) = 9.4e-117
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P + K+ KK K ++ R ++ P KE E
Sbjct: 1405 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYK-DSSSGRQLSEVFIQLPSRKELPE 1463
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ FK++K E + + R+L L++
Sbjct: 1464 YYELIRKPVDFKKIK-----ERIRNHKYRSLNDLEK 1494
Score = 42 (19.8 bits), Expect = 1.2e-116, Sum P(4) = 1.2e-116
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQE-----PQERVHKRRKAEFSVPSVPFIDGASAQVRD 812
T S ++ + S K+KK+G E P K +K +V + + D +S +
Sbjct: 1392 TTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAV--IKYKDSSSGRQLS 1449
Query: 813 WSYGNL-SKRDATRFYRAVMK 832
+ L S+++ +Y + K
Sbjct: 1450 EVFIQLPSRKELPEYYELIRK 1470
Score = 40 (19.1 bits), Expect = 2.9e-114, Sum P(3) = 2.9e-114
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEE+ ++D +
Sbjct: 1248 QAILEHEEQDEEEDEV 1263
Score = 37 (18.1 bits), Expect = 9.4e-117, Sum P(4) = 9.4e-117
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 643 QKLNAEGSWRRKKQRKGNELS------AILRFGAEELFKEDRNDEESKKR 686
+K+ GS RK+ + L+ AI EE+ +E R + S+KR
Sbjct: 1331 EKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKR 1380
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 1102 (393.0 bits), Expect = 2.1e-116, Sum P(4) = 2.1e-116
Identities = 246/536 (45%), Positives = 340/536 (63%)
Query: 167 EQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIP 226
EQP L GGKL+ YQ++GL ++V+ + N N ILADEMGLGKT+Q+++++ +L ++
Sbjct: 1701 EQPALLEGGKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSYLIEVKKNN 1760
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNT 286
GPFLVVVPLSTLSNW +EF KW P + ++Y G + +R+ ++E + P +FN
Sbjct: 1761 GPFLVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPARK--SKFEEFI-----APGQFNA 1813
Query: 287 LLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTL-SEFSTKNKLLITGTPLQ 345
++TTYE ++KDK LSKIKWNYL+VDE HR+KN ++L L + +S++ +LL+TGTPLQ
Sbjct: 1814 VVTTYEYIIKDKNALSKIKWNYLIVDEGHRMKNYTSKLSIILGTSYSSRYRLLLTGTPLQ 1873
Query: 346 NSVEELWALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPH 394
NS+ ELWALL+FL F +DF Q + NE E + LH LRP
Sbjct: 1874 NSLPELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQLLIIQRLHKVLRPF 1933
Query: 395 ILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDL--NKGVRGNQV---SL 449
+LRR+ K+VE LP K+E++L+ +MS Q + Y I + L + G GN L
Sbjct: 1934 LLRRLKKEVEAQLPDKVEKVLKCDMSAFQAKMYDLIKTKGVSKLASSGGADGNPKLAKGL 1993
Query: 450 LNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETK 509
N V+L+K CNHP+LF Y + +I+D +I +GK +LD+LL +L
Sbjct: 1994 KNTYVQLRKICNHPYLF------YDDEYNIDDN-----LIRYAGKFDLLDRLLPKLKAAG 2042
Query: 510 HRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLST 569
HRVLIFSQM ++++IL + +YK ++F RLDGSTK++ R ++ FNAP SE F F+LST
Sbjct: 2043 HRVLIFSQMTQLINILEVFFAYKDYKFLRLDGSTKSDERGHLLELFNAPNSEYFIFVLST 2102
Query: 570 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILE 629
RAGGLG+NL TADTVIIFDSDWNPQ DLQA RAHRIGQ++ V + R VT+ SVEE IL
Sbjct: 2103 RAGGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVRVLRLVTAHSVEESILA 2162
Query: 630 RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
RA K LD +IQ G + K R ++ +L E+L +D E K+
Sbjct: 2163 RANFKKELDKKIIQA----GQFNNKSNR--SDRKKML----EDLMTQDETAEMEKQ 2208
Score = 58 (25.5 bits), Expect = 2.1e-116, Sum P(4) = 2.1e-116
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 72 VSKEMDLDIIKQ--NSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAE-ATWEK-DEII 127
+ K MD++ + + + V ++I+D++ EYL ++ + E T EK E I
Sbjct: 1204 IPKPMDIEFMLECKRNLVSQLISDKL----------EYL--YESIPTLEDGTIEKLQETI 1251
Query: 128 DFAQDAIDEYKA---REAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
+ Q ++ EY+ RE AE K + KK K +KLD+Q + +D+ +
Sbjct: 1252 QYKQLSLLEYQKQLRREVLDAEISKS---KLKKSKDLKQKLDQQQSNEEKNRFKDFLGQI 1308
Query: 185 LN 186
LN
Sbjct: 1309 LN 1310
Score = 50 (22.7 bits), Expect = 2.1e-116, Sum P(4) = 2.1e-116
Identities = 14/78 (17%), Positives = 34/78 (43%)
Query: 1034 MPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKW 1093
M +S L D + P V + + +PQ+ +QP +++ + + +Q ++ +
Sbjct: 3097 MSLSNLTNDDEPNPQPTFVTRPQQQPQQQQPQQQQQPQQQQQPQQQQQQPQQQQQQQQQQ 3156
Query: 1094 MEWCEDVMADEIRTLQRL 1111
+ + + LQ+L
Sbjct: 3157 QQQQQQQQQQQQPQLQQL 3174
Score = 47 (21.6 bits), Expect = 2.1e-116, Sum P(4) = 2.1e-116
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 721 VANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSE 779
++ F +DDGS S ++ + E P+ R T S + E +N+++KK ++
Sbjct: 2322 ISEFFDDDDDGSSSS---SSDSDSDFESKPTPK--RTTTSDKPKSSKESNNRKEKKNTK 2375
Score = 43 (20.2 bits), Expect = 1.1e-115, Sum P(4) = 1.1e-115
Identities = 7/40 (17%), Positives = 22/40 (55%)
Query: 1180 EEELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLKQER 1219
++++ + ++ +++W+ + + G K I+ KL +R
Sbjct: 2539 KKKISENEQKYLQIWDAIRADQDEEGRKRSDIFVKLPSKR 2578
Score = 42 (19.8 bits), Expect = 7.0e-116, Sum P(4) = 7.0e-116
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 764 ANEPERSNKRKKKGSELQEPQE 785
A P R+NKRK+ S + ++
Sbjct: 2413 ATTPSRTNKRKELESNYSDEED 2434
Score = 38 (18.4 bits), Expect = 5.3e-113, Sum P(3) = 5.3e-113
Identities = 22/106 (20%), Positives = 43/106 (40%)
Query: 1231 NGSASGSIDNDLNFSTFNRHAERQKGHKNVSTYQMTEPIHKGIDPKKFEAWKRRRR-AET 1289
+GS+S S D+D +F E + K +T + + + K+ + K + + +T
Sbjct: 2331 DGSSSSSSDSDSDF-------ESKPTPKRTTTSDKPKSSKESNNRKEKKNTKEKLKDKDT 2383
Query: 1290 DMYSQAQPMLQRPMNNGTRLPDPNSLGILGAAPT-DNRRFVTERRY 1334
+ NN D N++ ++ P+ N+R E Y
Sbjct: 2384 NGLDDDDDDNNSNNNNNNDDYDNNNVSVVATTPSRTNKRKELESNY 2429
Score = 37 (18.1 bits), Expect = 2.3e-115, Sum P(4) = 2.3e-115
Identities = 22/103 (21%), Positives = 40/103 (38%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSY-- 815
+ ++ E E R N+ + E +E +E R E + P D + + RD+S
Sbjct: 3001 SSNHKEHRERHRENREHRGDRENRENRENRENREHREHR-DNRPNRD--NREFRDYSSNS 3057
Query: 816 -GNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEV 857
GN + + + + N S +L + GG P +
Sbjct: 3058 SGNNNNNNMISNFNNINN-NNNSNTNLNNINNGGGKRYDPMSL 3099
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 1078 (384.5 bits), Expect = 3.4e-116, Sum P(4) = 3.4e-116
Identities = 253/600 (42%), Positives = 359/600 (59%)
Query: 117 AEATWEKD--EIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
+E EKD +II+ A QD DEY + +A Q A ++++Q L
Sbjct: 650 SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYT-----VAHAISERVEKQSALLI 704
Query: 174 GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVV 233
G L+ YQL+GL ++V+ + N+ N ILADEMGLGKT+Q+++++ +L +++ GP+L++V
Sbjct: 705 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 764
Query: 234 PLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEV 293
PLSTLSNW EF KW P++ I Y GT A R + G KFN LLTTYE
Sbjct: 765 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRR-----SLVPQLRSG---KFNVLLTTYEY 816
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELW 352
++KDK +L+KI+W Y++VDE HR+KN +L L+ + ++L+TGTPLQN + ELW
Sbjct: 817 IIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELW 876
Query: 353 ALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIK 401
ALL+FL FKS F Q + NE E + LH LRP +LRR+ K
Sbjct: 877 ALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 936
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVEL 456
+VE LP K+E +++ +MS LQK Y K IL + + +K +G +L+N +++L
Sbjct: 937 EVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQL 996
Query: 457 KKCCNHPFLF----ES-ADH-GYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKH 510
+K CNHP++F ES A+H GY IN ++L R +SGK +LD++L +L T H
Sbjct: 997 RKICNHPYMFQHIEESFAEHLGYSNGV-ING-AELYR---ASGKFELLDRILPKLRATNH 1051
Query: 511 RVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTR 570
RVL+F QM ++ I+ +Y +++ F + RLDG+TK+E R + FN PGS+ F FLLSTR
Sbjct: 1052 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1111
Query: 571 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 630
AGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL
Sbjct: 1112 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1171
Query: 631 AKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
AK K+ +D VIQ G + +K L AIL E +++ D+E+ +++
Sbjct: 1172 AKYKLNVDQKVIQA----GMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMI 1227
Score = 47 (21.6 bits), Expect = 9.8e-114, Sum P(3) = 9.8e-114
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 1054 FQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
F++ + + K + E +EE E D EE + K VK
Sbjct: 1465 FKSARQKIAKEEESEDESNEEEEE-EDEEESESEAKSVK 1502
Score = 45 (20.9 bits), Expect = 1.6e-113, Sum P(3) = 1.6e-113
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
+ A+ +S E+NE E ++ SE + + ++ +K E
Sbjct: 1471 KIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDE 1512
Score = 44 (20.5 bits), Expect = 3.4e-116, Sum P(4) = 3.4e-116
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEEE ++D +
Sbjct: 1202 QAILEHEEENEEEDEV 1217
Score = 44 (20.5 bits), Expect = 3.4e-116, Sum P(4) = 3.4e-116
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK 176
+KD + + DEY A + + K ++K K RK + E GG+
Sbjct: 505 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAE-EIAEGGE 558
Score = 44 (20.5 bits), Expect = 2.0e-113, Sum P(3) = 2.0e-113
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 632 KKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
K M+L H Q N EGS + L ++ + +++ KE+ +++ES +
Sbjct: 1435 KDVMLLCHNA-QTFNLEGS---QIYEDSIVLQSVFKSARQKIAKEEESEDESNE 1484
Score = 41 (19.5 bits), Expect = 3.4e-116, Sum P(4) = 3.4e-116
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 1274 DPKKFE---AWKRRRRAETDMYSQAQPMLQRPMN 1304
DP K + A KRR R + S P L + MN
Sbjct: 1339 DPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMN 1372
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 1078 (384.5 bits), Expect = 4.0e-116, Sum P(4) = 4.0e-116
Identities = 253/600 (42%), Positives = 359/600 (59%)
Query: 117 AEATWEKD--EIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
+E EKD +II+ A QD DEY + +A Q A ++++Q L
Sbjct: 648 SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYT-----VAHAISERVEKQSALLI 702
Query: 174 GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVV 233
G L+ YQL+GL ++V+ + N+ N ILADEMGLGKT+Q+++++ +L +++ GP+L++V
Sbjct: 703 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 762
Query: 234 PLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEV 293
PLSTLSNW EF KW P++ I Y GT A R + G KFN LLTTYE
Sbjct: 763 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRR-----SLVPQLRSG---KFNVLLTTYEY 814
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELW 352
++KDK +L+KI+W Y++VDE HR+KN +L L+ + ++L+TGTPLQN + ELW
Sbjct: 815 IIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELW 874
Query: 353 ALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIK 401
ALL+FL FKS F Q + NE E + LH LRP +LRR+ K
Sbjct: 875 ALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 934
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVEL 456
+VE LP K+E +++ +MS LQK Y K IL + + +K +G +L+N +++L
Sbjct: 935 EVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQL 994
Query: 457 KKCCNHPFLF----ES-ADH-GYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKH 510
+K CNHP++F ES A+H GY IN ++L R +SGK +LD++L +L T H
Sbjct: 995 RKICNHPYMFQHIEESFAEHLGYSNGV-ING-AELYR---ASGKFELLDRILPKLRATNH 1049
Query: 511 RVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTR 570
RVL+F QM ++ I+ +Y +++ F + RLDG+TK+E R + FN PGS+ F FLLSTR
Sbjct: 1050 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1109
Query: 571 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 630
AGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL
Sbjct: 1110 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1169
Query: 631 AKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
AK K+ +D VIQ G + +K L AIL E +++ D+E+ +++
Sbjct: 1170 AKYKLNVDQKVIQA----GMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMI 1225
Score = 47 (21.6 bits), Expect = 1.2e-113, Sum P(3) = 1.2e-113
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 1054 FQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
F++ + + K + E +EE E D EE + K VK
Sbjct: 1463 FKSARQKIAKEEESEDESNEEEEE-EDEEESESEAKSVK 1500
Score = 45 (20.9 bits), Expect = 1.9e-113, Sum P(3) = 1.9e-113
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
+ A+ +S E+NE E ++ SE + + ++ +K E
Sbjct: 1469 KIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDE 1510
Score = 44 (20.5 bits), Expect = 4.0e-116, Sum P(4) = 4.0e-116
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEEE ++D +
Sbjct: 1200 QAILEHEEENEEEDEV 1215
Score = 44 (20.5 bits), Expect = 2.4e-113, Sum P(3) = 2.4e-113
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 632 KKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
K M+L H Q N EGS + L ++ + +++ KE+ +++ES +
Sbjct: 1433 KDVMLLCHNA-QTFNLEGS---QIYEDSIVLQSVFKSARQKIAKEEESEDESNE 1482
Score = 43 (20.2 bits), Expect = 4.0e-116, Sum P(4) = 4.0e-116
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK 176
+KD + + DEY A + + K ++K K RK + E GG+
Sbjct: 503 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRR-RKKKKAEENAEGGE 556
Score = 41 (19.5 bits), Expect = 4.0e-116, Sum P(4) = 4.0e-116
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 1274 DPKKFE---AWKRRRRAETDMYSQAQPMLQRPMN 1304
DP K + A KRR R + S P L + MN
Sbjct: 1337 DPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMN 1370
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 1078 (384.5 bits), Expect = 4.3e-116, Sum P(4) = 4.3e-116
Identities = 253/600 (42%), Positives = 359/600 (59%)
Query: 117 AEATWEKD--EIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
+E EKD +II+ A QD DEY + +A Q A ++++Q L
Sbjct: 650 SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYT-----VAHAISERVEKQSALLI 704
Query: 174 GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVV 233
G L+ YQL+GL ++V+ + N+ N ILADEMGLGKT+Q+++++ +L +++ GP+L++V
Sbjct: 705 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 764
Query: 234 PLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEV 293
PLSTLSNW EF KW P++ I Y GT A R + G KFN LLTTYE
Sbjct: 765 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRR-----SLVPQLRSG---KFNVLLTTYEY 816
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELW 352
++KDK +L+KI+W Y++VDE HR+KN +L L+ + ++L+TGTPLQN + ELW
Sbjct: 817 IIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELW 876
Query: 353 ALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIK 401
ALL+FL FKS F Q + NE E + LH LRP +LRR+ K
Sbjct: 877 ALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 936
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVEL 456
+VE LP K+E +++ +MS LQK Y K IL + + +K +G +L+N +++L
Sbjct: 937 EVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQL 996
Query: 457 KKCCNHPFLF----ES-ADH-GYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKH 510
+K CNHP++F ES A+H GY IN ++L R +SGK +LD++L +L T H
Sbjct: 997 RKICNHPYMFQHIEESFAEHLGYSNGV-ING-AELYR---ASGKFELLDRILPKLRATNH 1051
Query: 511 RVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTR 570
RVL+F QM ++ I+ +Y +++ F + RLDG+TK+E R + FN PGS+ F FLLSTR
Sbjct: 1052 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1111
Query: 571 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 630
AGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL
Sbjct: 1112 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1171
Query: 631 AKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
AK K+ +D VIQ G + +K L AIL E +++ D+E+ +++
Sbjct: 1172 AKYKLNVDQKVIQA----GMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMI 1227
Score = 47 (21.6 bits), Expect = 1.3e-113, Sum P(3) = 1.3e-113
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 1054 FQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
F++ + + K + E +EE E D EE + K VK
Sbjct: 1465 FKSARQKIAKEEESEDESNEEEEE-EDEEESESEAKSVK 1502
Score = 45 (20.9 bits), Expect = 2.0e-113, Sum P(3) = 2.0e-113
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
+ A+ +S E+NE E ++ SE + + ++ +K E
Sbjct: 1471 KIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDE 1512
Score = 44 (20.5 bits), Expect = 4.3e-116, Sum P(4) = 4.3e-116
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEEE ++D +
Sbjct: 1202 QAILEHEEENEEEDEV 1217
Score = 44 (20.5 bits), Expect = 2.6e-113, Sum P(3) = 2.6e-113
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 632 KKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
K M+L H Q N EGS + L ++ + +++ KE+ +++ES +
Sbjct: 1435 KDVMLLCHNA-QTFNLEGS---QIYEDSIVLQSVFKSARQKIAKEEESEDESNE 1484
Score = 43 (20.2 bits), Expect = 4.3e-116, Sum P(4) = 4.3e-116
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK 176
+KD + + DEY A + + K ++K K RK + E GG+
Sbjct: 505 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAE-ENAEGGE 558
Score = 41 (19.5 bits), Expect = 4.3e-116, Sum P(4) = 4.3e-116
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 1274 DPKKFE---AWKRRRRAETDMYSQAQPMLQRPMN 1304
DP K + A KRR R + S P L + MN
Sbjct: 1339 DPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMN 1372
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 1078 (384.5 bits), Expect = 4.7e-116, Sum P(4) = 4.7e-116
Identities = 253/600 (42%), Positives = 359/600 (59%)
Query: 117 AEATWEKD--EIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
+E EKD +II+ A QD DEY + +A Q A ++++Q L
Sbjct: 671 SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYT-----VAHAISERVEKQSALLI 725
Query: 174 GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVV 233
G L+ YQL+GL ++V+ + N+ N ILADEMGLGKT+Q+++++ +L +++ GP+L++V
Sbjct: 726 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 785
Query: 234 PLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEV 293
PLSTLSNW EF KW P++ I Y GT A R + G KFN LLTTYE
Sbjct: 786 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRR-----SLVPQLRSG---KFNVLLTTYEY 837
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELW 352
++KDK +L+KI+W Y++VDE HR+KN +L L+ + ++L+TGTPLQN + ELW
Sbjct: 838 IIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELW 897
Query: 353 ALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIK 401
ALL+FL FKS F Q + NE E + LH LRP +LRR+ K
Sbjct: 898 ALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 957
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVEL 456
+VE LP K+E +++ +MS LQK Y K IL + + +K +G +L+N +++L
Sbjct: 958 EVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQL 1017
Query: 457 KKCCNHPFLF----ES-ADH-GYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKH 510
+K CNHP++F ES A+H GY IN ++L R +SGK +LD++L +L T H
Sbjct: 1018 RKICNHPYMFQHIEESFAEHLGYSNGV-ING-AELYR---ASGKFELLDRILPKLRATNH 1072
Query: 511 RVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTR 570
RVL+F QM ++ I+ +Y +++ F + RLDG+TK+E R + FN PGS+ F FLLSTR
Sbjct: 1073 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1132
Query: 571 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 630
AGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL
Sbjct: 1133 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1192
Query: 631 AKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
AK K+ +D VIQ G + +K L AIL E +++ D+E+ +++
Sbjct: 1193 AKYKLNVDQKVIQA----GMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMI 1248
Score = 49 (22.3 bits), Expect = 1.4e-113, Sum P(3) = 1.4e-113
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 1054 FQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
F++ + + K + E+ +EE E D EE + K VK
Sbjct: 1486 FKSARQKIAKEEESEEESNEEEEE-DDEEESESEAKSVK 1523
Score = 48 (22.0 bits), Expect = 1.8e-113, Sum P(3) = 1.8e-113
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
+ A+ +S E+NE E + ++ SE + + ++ +K E
Sbjct: 1492 KIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEE 1533
Score = 47 (21.6 bits), Expect = 2.3e-113, Sum P(3) = 2.3e-113
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 632 KKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
K M+L H Q N EGS + L ++ + +++ KE+ ++EES +
Sbjct: 1456 KDVMLLCHNA-QTFNLEGS---QIYEDSIVLQSVFKSARQKIAKEEESEEESNE 1505
Score = 44 (20.5 bits), Expect = 4.7e-116, Sum P(4) = 4.7e-116
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEEE ++D +
Sbjct: 1223 QAILEHEEENEEEDEV 1238
Score = 44 (20.5 bits), Expect = 4.7e-116, Sum P(4) = 4.7e-116
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 1252 ERQKGHKNVSTYQMTEPIHKGIDPKKFEAWKRRRRAETDMYSQAQPMLQRPMN 1304
+++K +NV +P+ + ++ K KRR R + S P L + MN
Sbjct: 1349 KKRKRRRNVDK----DPVKEDVEKAK----KRRGRPPAEKLSPNPPKLTKQMN 1393
Score = 43 (20.2 bits), Expect = 4.7e-116, Sum P(4) = 4.7e-116
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK 176
+KD + + DEY A + + K ++K K RK + E GG+
Sbjct: 526 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAE-ENAEGGE 579
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 1082 (385.9 bits), Expect = 5.1e-116, Sum P(3) = 5.1e-116
Identities = 244/584 (41%), Positives = 360/584 (61%)
Query: 128 DFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNF 187
DF D ++ + E + +D + ++ EQP L GG L++YQ++GL +
Sbjct: 489 DFDDDDDEDIASGSDEEGEGRRKIDYYAVAHRIK-EEITEQPSILVGGTLKEYQMKGLQW 547
Query: 188 LVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRK 247
+++ + N+ N ILADEMGLGKT+Q++S++ + ++ GPFLV+VPLSTL+NW EF K
Sbjct: 548 MISLYNNNLNGILADEMGLGKTIQTISLITHIIERKRNNGPFLVIVPLSTLTNWNLEFEK 607
Query: 248 WLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWN 307
W P+++ IVY G +R+ QQ + + G F LLTTYE ++KD+ +LSKIKW
Sbjct: 608 WAPSVSRIVYKGPPNARKQQQQ-----NIRWGN---FQVLLTTYEYIIKDRPILSKIKWT 659
Query: 308 YLMVDEAHRLKNSEAQLYTTLSEFSTKN-KLLITGTPLQNSVEELWALLHFLDHDKFKSK 366
+++VDE HR+KN++++L +TLS++ T +L++TGTPLQN++ ELWALL+F+ + FKS
Sbjct: 660 HMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNNLPELWALLNFVLPNIFKSV 719
Query: 367 DDFIQ--N--YKNLSS-----FNENE----LANLHMELRPHILRRIIKDVEKSLPPKIER 413
F + N + N E E + LH LRP +LRR+ KDVEK LP K ER
Sbjct: 720 KSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKQER 779
Query: 414 ILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVS---LLNIVVELKKCCNHPFLFESAD 470
+++ S LQ + K + N ++ G +G +V L N++++L+K CNHPF+FE +
Sbjct: 780 VIKCRFSALQAKLNKQLATHNKMVVSDG-KGGKVGMRGLSNMLMQLRKLCNHPFVFEQVE 838
Query: 471 HGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMS 530
ND I ++GK +LD++L + T HRVL+F QM ++++I+ +++
Sbjct: 839 DQVNPGRGTNDL-----IWRTAGKFELLDRILPKFKATGHRVLMFFQMTQIMNIMEDFLR 893
Query: 531 YKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSD 590
+G ++ RLDGSTK++ R + FNAP SE FCFLLSTRAGGLG+NL TADTVIIFDSD
Sbjct: 894 LRGMKYLRLDGSTKSDDRSDLLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDSD 953
Query: 591 WNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGS 650
WNP DLQA RAHRIGQ+ V I R +TS SVEE ILERA+ K+ +D VIQ G
Sbjct: 954 WNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERAQFKLDMDGKVIQA----GK 1009
Query: 651 WRRKKQRKGNELSAILRF------GAEELFKEDRNDEESKKRLL 688
+ K + E A+LR G ++ +D D++ ++
Sbjct: 1010 FDNKSTNE--ERDALLRTLLETAEGTDQAGDQDEMDDDDLNNIM 1051
Score = 55 (24.4 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 741 EAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK----RRKAEFS 796
+A+A+ E + R + K +A E S + ++ SE +P++R + +RKAE
Sbjct: 1144 DAIARKEARVEKRRSNKEKRGRKAQGDESSPEPSRETSETPQPKKRGRRGPAPKRKAEEL 1203
Query: 797 VPSVP 801
P
Sbjct: 1204 AEETP 1208
Score = 50 (22.7 bits), Expect = 5.1e-116, Sum P(3) = 5.1e-116
Identities = 20/77 (25%), Positives = 31/77 (40%)
Query: 1273 IDPKKFEAWKRRRRAETDMYSQAQPMLQRPMNNGTRLPDPNSLGILGAAPTDNRRFVTER 1332
++ ++ KR R+A+ D ++ P P + P P G G AP + E
Sbjct: 1153 VEKRRSNKEKRGRKAQGD---ESSP---EPSRETSETPQPKKRGRRGPAPKRKAEELAEE 1206
Query: 1333 R-YPMRQTGFPPRQGFP 1348
P R+ G RQ P
Sbjct: 1207 TPQPKRKRG---RQAKP 1220
Score = 46 (21.3 bits), Expect = 5.1e-116, Sum P(3) = 5.1e-116
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 1204 SGEKLHQIYSKLKQERQEEAGIGPSH 1229
S E+L ++ ++ +ERQ+ GP H
Sbjct: 1054 SDEEL-AVFQRMDRERQKTCPYGPGH 1078
Score = 43 (20.2 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 752 PRAARNTKSYAEAN-EPERSNKRKKKGSELQEPQER 786
P R + AE +P+R R+ K E P +R
Sbjct: 1194 PAPKRKAEELAEETPQPKRKRGRQAKPVETLSPDDR 1229
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 1078 (384.5 bits), Expect = 5.4e-116, Sum P(4) = 5.4e-116
Identities = 253/600 (42%), Positives = 359/600 (59%)
Query: 117 AEATWEKD--EIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
+E EKD +II+ A QD DEY + +A Q A ++++Q L
Sbjct: 650 SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYT-----VAHAISERVEKQSALLI 704
Query: 174 GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVV 233
G L+ YQL+GL ++V+ + N+ N ILADEMGLGKT+Q+++++ +L +++ GP+L++V
Sbjct: 705 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 764
Query: 234 PLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEV 293
PLSTLSNW EF KW P++ I Y GT A R + G KFN LLTTYE
Sbjct: 765 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRR-----SLVPQLRSG---KFNVLLTTYEY 816
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELW 352
++KDK +L+KI+W Y++VDE HR+KN +L L+ + ++L+TGTPLQN + ELW
Sbjct: 817 IIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELW 876
Query: 353 ALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIK 401
ALL+FL FKS F Q + NE E + LH LRP +LRR+ K
Sbjct: 877 ALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 936
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVEL 456
+VE LP K+E +++ +MS LQK Y K IL + + +K +G +L+N +++L
Sbjct: 937 EVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQL 996
Query: 457 KKCCNHPFLF----ES-ADH-GYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKH 510
+K CNHP++F ES A+H GY IN ++L R +SGK +LD++L +L T H
Sbjct: 997 RKICNHPYMFQHIEESFAEHLGYSNGV-ING-AELYR---ASGKFELLDRILPKLRATNH 1051
Query: 511 RVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTR 570
RVL+F QM ++ I+ +Y +++ F + RLDG+TK+E R + FN PGS+ F FLLSTR
Sbjct: 1052 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1111
Query: 571 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 630
AGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL
Sbjct: 1112 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1171
Query: 631 AKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
AK K+ +D VIQ G + +K L AIL E +++ D+E+ +++
Sbjct: 1172 AKYKLNVDQKVIQA----GMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMI 1227
Score = 47 (21.6 bits), Expect = 5.4e-116, Sum P(4) = 5.4e-116
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 1054 FQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
F++ + + K + E +EE E D EE + K VK
Sbjct: 1483 FKSARQKIAKEEESEDESNEEEEE-EDEEESESEAKSVK 1520
Score = 45 (20.9 bits), Expect = 2.7e-113, Sum P(3) = 2.7e-113
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
+ A+ +S E+NE E ++ SE + + ++ +K E
Sbjct: 1489 KIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDE 1530
Score = 44 (20.5 bits), Expect = 5.4e-116, Sum P(4) = 5.4e-116
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK 176
+KD + + DEY A + + K ++K K RK + E GG+
Sbjct: 505 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAE-EIAEGGE 558
Score = 44 (20.5 bits), Expect = 6.8e-116, Sum P(4) = 6.8e-116
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEEE ++D +
Sbjct: 1202 QAILEHEEENEEEDEV 1217
Score = 44 (20.5 bits), Expect = 3.4e-113, Sum P(3) = 3.4e-113
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 632 KKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
K M+L H Q N EGS + L ++ + +++ KE+ +++ES +
Sbjct: 1453 KDVMLLCHNA-QTFNLEGS---QIYEDSIVLQSVFKSARQKIAKEEESEDESNE 1502
Score = 41 (19.5 bits), Expect = 6.8e-116, Sum P(4) = 6.8e-116
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 1274 DPKKFE---AWKRRRRAETDMYSQAQPMLQRPMN 1304
DP K + A KRR R + S P L + MN
Sbjct: 1339 DPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMN 1372
Score = 39 (18.8 bits), Expect = 5.4e-116, Sum P(4) = 5.4e-116
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 983 ETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXR-----KASKKGREKSENILNMPIS 1037
E P P L ++ NA+++ + + + GR+ SE + +P S
Sbjct: 1358 EKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPGNSQLEIEGNSSGRQLSEVFIQLP-S 1416
Query: 1038 RLKRDKKGKPGSAKVNFQTTKDRF--HK 1063
R + + + V+F+ K+R HK
Sbjct: 1417 RKELPEYYELIRKPVDFKKIKERIRNHK 1444
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 1080 (385.2 bits), Expect = 8.2e-116, Sum P(3) = 8.2e-116
Identities = 237/538 (44%), Positives = 336/538 (62%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY +A +A +G + A ++D+Q + G L+ YQ++G
Sbjct: 39 IIENAKQDVDDEYGVSQA-LA-RG--LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKG 94
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VPLSTLSNWA E
Sbjct: 95 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYE 154
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN LLTTYE ++KDK +L+KI
Sbjct: 155 FDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYIIKDKHILAKI 206
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+FL F
Sbjct: 207 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 266
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 267 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 326
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 327 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 386
Query: 468 SADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIL 525
+ + L+ + +SGK +LD++L +L T H+VL+F QM ++ I+
Sbjct: 387 HIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 445
Query: 526 AEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVI 585
+Y +Y+GF++ RLDG+TKAE R + FN PGSE F FLLSTRAGGLG+NL +ADTVI
Sbjct: 446 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 505
Query: 586 IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 506 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ 563
Score = 52 (23.4 bits), Expect = 8.2e-116, Sum P(3) = 8.2e-116
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 1067 VEQPLTKEEGEMSDNEEVYEQFKEVK-----WMEWCEDVMADEIRTLQRLQRLQATSDNL 1121
+E+P KEE E+ D+E V + + +M D +E R +R RL D L
Sbjct: 618 LEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLME-EDEL 676
Query: 1122 P 1122
P
Sbjct: 677 P 677
Score = 44 (20.5 bits), Expect = 8.2e-116, Sum P(3) = 8.2e-116
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 1179 HEEELYKQDRMTMRLWNYVSTFSNLSG--EKLHQIYSKLKQERQEEAG 1224
H +E+ D +T + W L E++ Q S K++R +AG
Sbjct: 706 HRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAG 753
Score = 43 (20.2 bits), Expect = 4.0e-114, Sum P(3) = 4.0e-114
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P + K+ KK K ++ R ++ P KE E
Sbjct: 771 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYK-DSSSGRQLSEVFIQLPSRKELPE 829
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ FK++K E + + R+L L++
Sbjct: 830 YYELIRKPVDFKKIK-----ERIRNHKYRSLNDLEK 860
Score = 42 (19.8 bits), Expect = 5.1e-114, Sum P(3) = 5.1e-114
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQE-----PQERVHKRRKAEFSVPSVPFIDGASAQVRD 812
T S ++ + S K+KK+G E P K +K +V + + D +S +
Sbjct: 758 TTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAV--IKYKDSSSGRQLS 815
Query: 813 WSYGNL-SKRDATRFYRAVMK 832
+ L S+++ +Y + K
Sbjct: 816 EVFIQLPSRKELPEYYELIRK 836
Score = 37 (18.1 bits), Expect = 4.0e-114, Sum P(3) = 4.0e-114
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 643 QKLNAEGSWRRKKQRKGNELS------AILRFGAEELFKEDRNDEESKKR 686
+K+ GS RK+ + L+ AI EE+ +E R + S+KR
Sbjct: 697 EKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKR 746
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 1078 (384.5 bits), Expect = 9.1e-116, Sum P(4) = 9.1e-116
Identities = 253/600 (42%), Positives = 359/600 (59%)
Query: 117 AEATWEKD--EIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
+E EKD +II+ A QD DEY + +A Q A ++++Q L
Sbjct: 666 SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYT-----VAHAISERVEKQSALLI 720
Query: 174 GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVV 233
G L+ YQL+GL ++V+ + N+ N ILADEMGLGKT+Q+++++ +L +++ GP+L++V
Sbjct: 721 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 780
Query: 234 PLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEV 293
PLSTLSNW EF KW P++ I Y GT A R + G KFN LLTTYE
Sbjct: 781 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRR-----SLVPQLRSG---KFNVLLTTYEY 832
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELW 352
++KDK +L+KI+W Y++VDE HR+KN +L L+ + ++L+TGTPLQN + ELW
Sbjct: 833 IIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELW 892
Query: 353 ALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIK 401
ALL+FL FKS F Q + NE E + LH LRP +LRR+ K
Sbjct: 893 ALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 952
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVEL 456
+VE LP K+E +++ +MS LQK Y K IL + + +K +G +L+N +++L
Sbjct: 953 EVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQL 1012
Query: 457 KKCCNHPFLF----ES-ADH-GYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKH 510
+K CNHP++F ES A+H GY IN ++L R +SGK +LD++L +L T H
Sbjct: 1013 RKICNHPYMFQHIEESFAEHLGYSNGV-ING-AELYR---ASGKFELLDRILPKLRATNH 1067
Query: 511 RVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTR 570
RVL+F QM ++ I+ +Y +++ F + RLDG+TK+E R + FN PGS+ F FLLSTR
Sbjct: 1068 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1127
Query: 571 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 630
AGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL
Sbjct: 1128 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1187
Query: 631 AKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
AK K+ +D VIQ G + +K L AIL E +++ D+E+ +++
Sbjct: 1188 AKYKLNVDQKVIQA----GMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMI 1243
Score = 47 (21.6 bits), Expect = 9.1e-116, Sum P(4) = 9.1e-116
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 1054 FQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
F++ + + K + E +EE E D EE + K VK
Sbjct: 1499 FKSARQKIAKEEESEDESNEEEEE-EDEEESESEAKSVK 1536
Score = 44 (20.5 bits), Expect = 1.5e-115, Sum P(4) = 1.5e-115
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEEE ++D +
Sbjct: 1218 QAILEHEEENEEEDEV 1233
Score = 44 (20.5 bits), Expect = 6.5e-113, Sum P(3) = 6.5e-113
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 632 KKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
K M+L H Q N EGS + L ++ + +++ KE+ +++ES +
Sbjct: 1469 KDVMLLCHNA-QTFNLEGS---QIYEDSIVLQSVFKSARQKIAKEEESEDESNE 1518
Score = 43 (20.2 bits), Expect = 9.1e-116, Sum P(4) = 9.1e-116
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK 176
+KD + + DEY A + + K ++K K RK + E GG+
Sbjct: 521 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAE-ENAEGGE 574
Score = 42 (19.8 bits), Expect = 1.1e-112, Sum P(3) = 1.1e-112
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRK 792
+ A+ +S E+NE E ++ SE + + ++ +K
Sbjct: 1505 KIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKK 1544
Score = 41 (19.5 bits), Expect = 1.5e-115, Sum P(4) = 1.5e-115
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 1274 DPKKFE---AWKRRRRAETDMYSQAQPMLQRPMN 1304
DP K + A KRR R + S P L + MN
Sbjct: 1355 DPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMN 1388
Score = 40 (19.1 bits), Expect = 9.1e-116, Sum P(4) = 9.1e-116
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 983 ETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXR-----KASKKGREKSENILNMPIS 1037
E P P L ++ NA+++ + + + GR+ SE + +P S
Sbjct: 1374 EKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLP-S 1432
Query: 1038 RLKRDKKGKPGSAKVNFQTTKDRF--HK 1063
R + + + V+F+ K+R HK
Sbjct: 1433 RKELPEYYELIRKPVDFKKIKERIRNHK 1460
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 1080 (385.2 bits), Expect = 1.1e-115, Sum P(4) = 1.1e-115
Identities = 237/538 (44%), Positives = 336/538 (62%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY +A +A +G + A ++D+Q + G L+ YQ++G
Sbjct: 706 IIENAKQDVDDEYGVSQA-LA-RG--LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKG 761
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VPLSTLSNWA E
Sbjct: 762 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYE 821
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN LLTTYE ++KDK +L+KI
Sbjct: 822 FDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYIIKDKHILAKI 873
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+FL F
Sbjct: 874 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 933
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 934 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 993
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 994 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1053
Query: 468 SADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIL 525
+ + L+ + +SGK +LD++L +L T H+VL+F QM ++ I+
Sbjct: 1054 HIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 1112
Query: 526 AEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVI 585
+Y +Y+GF++ RLDG+TKAE R + FN PGSE F FLLSTRAGGLG+NL +ADTVI
Sbjct: 1113 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 1172
Query: 586 IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 1173 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ 1230
Score = 53 (23.7 bits), Expect = 1.1e-115, Sum P(4) = 1.1e-115
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+KD+ + + DEY A + Q K + ++K K +K E E
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAE 593
Score = 52 (23.4 bits), Expect = 1.5e-114, Sum P(3) = 1.5e-114
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 1067 VEQPLTKEEGEMSDNEEVYEQFKEVK-----WMEWCEDVMADEIRTLQRLQRLQATSDNL 1121
+E+P KEE E+ D+E V + + +M D +E R +R RL D L
Sbjct: 1285 LEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLME-EDEL 1343
Query: 1122 P 1122
P
Sbjct: 1344 P 1344
Score = 43 (20.2 bits), Expect = 1.1e-115, Sum P(4) = 1.1e-115
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P + K+ KK K ++ R ++ P KE E
Sbjct: 1438 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYK-DSSSGRQLSEVFIQLPSRKELPE 1496
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ FK++K E + + R+L L++
Sbjct: 1497 YYELIRKPVDFKKIK-----ERIRNHKYRSLNDLEK 1527
Score = 42 (19.8 bits), Expect = 1.4e-115, Sum P(4) = 1.4e-115
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQE-----PQERVHKRRKAEFSVPSVPFIDGASAQVRD 812
T S ++ + S K+KK+G E P K +K +V + + D +S +
Sbjct: 1425 TTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAV--IKYKDSSSGRQLS 1482
Query: 813 WSYGNL-SKRDATRFYRAVMK 832
+ L S+++ +Y + K
Sbjct: 1483 EVFIQLPSRKELPEYYELIRK 1503
Score = 37 (18.1 bits), Expect = 1.1e-115, Sum P(4) = 1.1e-115
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 643 QKLNAEGSWRRKKQRKGNELS------AILRFGAEELFKEDRNDEESKKR 686
+K+ GS RK+ + L+ AI EE+ +E R + S+KR
Sbjct: 1364 EKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKR 1413
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 1078 (384.5 bits), Expect = 1.4e-115, Sum P(4) = 1.4e-115
Identities = 253/600 (42%), Positives = 359/600 (59%)
Query: 117 AEATWEKD--EIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
+E EKD +II+ A QD DEY + +A Q A ++++Q L
Sbjct: 673 SEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYT-----VAHAISERVEKQSALLI 727
Query: 174 GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVV 233
G L+ YQL+GL ++V+ + N+ N ILADEMGLGKT+Q+++++ +L +++ GP+L++V
Sbjct: 728 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 787
Query: 234 PLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEV 293
PLSTLSNW EF KW P++ I Y GT A R + G KFN LLTTYE
Sbjct: 788 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRR-----SLVPQLRSG---KFNVLLTTYEY 839
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELW 352
++KDK +L+KI+W Y++VDE HR+KN +L L+ + ++L+TGTPLQN + ELW
Sbjct: 840 IIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELW 899
Query: 353 ALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIK 401
ALL+FL FKS F Q + NE E + LH LRP +LRR+ K
Sbjct: 900 ALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 959
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVEL 456
+VE LP K+E +++ +MS LQK Y K IL + + +K +G +L+N +++L
Sbjct: 960 EVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQL 1019
Query: 457 KKCCNHPFLF----ES-ADH-GYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKH 510
+K CNHP++F ES A+H GY IN ++L R +SGK +LD++L +L T H
Sbjct: 1020 RKICNHPYMFQHIEESFAEHLGYSNGV-ING-AELYR---ASGKFELLDRILPKLRATNH 1074
Query: 511 RVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTR 570
RVL+F QM ++ I+ +Y +++ F + RLDG+TK+E R + FN PGS+ F FLLSTR
Sbjct: 1075 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1134
Query: 571 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 630
AGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL
Sbjct: 1135 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1194
Query: 631 AKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
AK K+ +D VIQ G + +K L AIL E +++ D+E+ +++
Sbjct: 1195 AKYKLNVDQKVIQA----GMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMI 1250
Score = 48 (22.0 bits), Expect = 2.3e-115, Sum P(4) = 2.3e-115
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 1054 FQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
F++ + + K + E+ +EE E D EE + K VK
Sbjct: 1506 FKSARQKIAKEEESEEESNEEEEE-EDEEESEAEAKSVK 1543
Score = 47 (21.6 bits), Expect = 6.0e-113, Sum P(3) = 6.0e-113
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 632 KKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
K M+L H Q N EGS + L ++ + +++ KE+ ++EES +
Sbjct: 1476 KDVMLLCHNA-QTFNLEGS---QIYEDSIVLQSVFKSARQKIAKEEESEEESNE 1525
Score = 44 (20.5 bits), Expect = 1.4e-115, Sum P(4) = 1.4e-115
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEEE ++D +
Sbjct: 1225 QAILEHEEENEEEDEV 1240
Score = 44 (20.5 bits), Expect = 1.4e-115, Sum P(4) = 1.4e-115
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 1252 ERQKGHKNVSTYQMTEPIHKGIDPKKFEAWKRRRRAETDMYSQAQPMLQRPMN 1304
+++K +NV +P+ + ++ K KRR R + S P L + MN
Sbjct: 1351 KKRKRRRNVDK----DPVKEDVEKAK----KRRGRPPAEKLSPNPPKLTKQMN 1395
Score = 44 (20.5 bits), Expect = 1.2e-112, Sum P(3) = 1.2e-112
Identities = 9/42 (21%), Positives = 21/42 (50%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
+ A+ +S E+NE E ++ +E + + ++ +K E
Sbjct: 1512 KIAKEEESEEESNEEEEEEDEEESEAEAKSVKVKIKLNKKEE 1553
Score = 41 (19.5 bits), Expect = 1.4e-115, Sum P(4) = 1.4e-115
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDL--QRKKGKASLRKLDEQPE 170
+KD + + DEY A + + K ++KK + +K +E E
Sbjct: 528 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRRKKAEENAE 578
Score = 38 (18.4 bits), Expect = 2.3e-115, Sum P(4) = 2.3e-115
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 983 ETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXR-----KASKKGREKSENILNMPIS 1037
E P P L ++ NA+++ + + + GR+ SE + +P S
Sbjct: 1381 EKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLP-S 1439
Query: 1038 RLKRDKKGKPGSAKVNFQTTKDRF--HK 1063
R + + + V+F+ K+R HK
Sbjct: 1440 RKELPEYYELIRKPVDFKKIKERIRNHK 1467
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 1086 (387.4 bits), Expect = 9.5e-115, Sum P(3) = 9.5e-115
Identities = 245/585 (41%), Positives = 356/585 (60%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY +A +A +G + A ++D+Q + G L+ YQ++G
Sbjct: 706 IIENAKQDVDDEYGVSQA-LA-RG--LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKG 761
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VPLSTLSNWA E
Sbjct: 762 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYE 821
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN LLTTYE ++KDK +L+KI
Sbjct: 822 FDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYIIKDKHILAKI 873
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+FL F
Sbjct: 874 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 933
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 934 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 993
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 994 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1053
Query: 468 SADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIL 525
+ + L+ + +SGK +LD++L +L T H+VL+F QM ++ I+
Sbjct: 1054 HIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 1112
Query: 526 AEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVI 585
+Y +Y+GF++ RLDG+TKAE R + FN PGSE F FLLSTRAGGLG+NL +ADTVI
Sbjct: 1113 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 1172
Query: 586 IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKL 645
IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 1173 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA- 1231
Query: 646 NAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
G + +K L AIL ++ +++ D+E+ +++
Sbjct: 1232 ---GMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMI 1273
Score = 53 (23.7 bits), Expect = 9.5e-115, Sum P(3) = 9.5e-115
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+KD+ + + DEY A + Q K + ++K K +K E E
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAE 593
Score = 45 (20.9 bits), Expect = 9.5e-115, Sum P(3) = 9.5e-115
Identities = 19/81 (23%), Positives = 35/81 (43%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQE-----PQERVHKRRKAEFSVPSVPFIDGASAQVRD 812
T S ++ E S K+KK+G E P K +K +V + + D +S +
Sbjct: 1396 TTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAV--IKYKDSSSGRQLS 1453
Query: 813 WSYGNL-SKRDATRFYRAVMK 832
+ L S+++ +Y + K
Sbjct: 1454 EVFIQLPSRKELPEYYELIRK 1474
Score = 43 (20.2 bits), Expect = 1.5e-114, Sum P(3) = 1.5e-114
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P + K+ KK K ++ R ++ P KE E
Sbjct: 1409 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYK-DSSSGRQLSEVFIQLPSRKELPE 1467
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ FK++K E + + R+L L++
Sbjct: 1468 YYELIRKPVDFKKIK-----ERIRNHKYRSLNDLEK 1498
Score = 40 (19.1 bits), Expect = 3.2e-114, Sum P(3) = 3.2e-114
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEE+ ++D +
Sbjct: 1248 QAILEHEEQDEEEDEV 1263
Score = 37 (18.1 bits), Expect = 6.6e-114, Sum P(3) = 6.6e-114
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 1179 HEEELYKQDRMTMRLWNYVSTFSNLSG------EKLHQIYSKLKQERQEEAG 1224
H +E+ D +T + W + G E++ Q S K++R EAG
Sbjct: 1340 HRKEVDYSDSLTEKQWLKQLKAAIEEGTLEEIEEEVRQKKSSRKRKRDSEAG 1391
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 1080 (385.2 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
Identities = 237/538 (44%), Positives = 336/538 (62%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY +A +A +G + A ++D+Q + G L+ YQ++G
Sbjct: 706 IIENAKQDVDDEYGVSQA-LA-RG--LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKG 761
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VPLSTLSNWA E
Sbjct: 762 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYE 821
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN LLTTYE ++KDK +L+KI
Sbjct: 822 FDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYIIKDKHILAKI 873
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+FL F
Sbjct: 874 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 933
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 934 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 993
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 994 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1053
Query: 468 SADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIL 525
+ + L+ + +SGK +LD++L +L T H+VL+F QM ++ I+
Sbjct: 1054 HIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 1112
Query: 526 AEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVI 585
+Y +Y+GF++ RLDG+TKAE R + FN PGSE F FLLSTRAGGLG+NL +ADTVI
Sbjct: 1113 EDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 1172
Query: 586 IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 1173 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ 1230
Score = 53 (23.7 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+KD+ + + DEY A + Q K + ++K K +K E E
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAE 593
Score = 52 (23.4 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 1067 VEQPLTKEEGEMSDNEEVYEQFKEVK-----WMEWCEDVMADEIRTLQRLQRLQATSDNL 1121
+E+P KEE E+ D+E V + + +M D +E R +R RL D L
Sbjct: 1285 LEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLME-EDEL 1343
Query: 1122 P 1122
P
Sbjct: 1344 P 1344
Score = 43 (20.2 bits), Expect = 2.1e-113, Sum P(3) = 2.1e-113
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P + K+ KK K ++ R ++ P KE E
Sbjct: 1470 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYK-DSSSGRQLSEVFIQLPSRKELPE 1528
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ FK++K E + + R+L L++
Sbjct: 1529 YYELIRKPVDFKKIK-----ERIRNHKYRSLNDLEK 1559
Score = 42 (19.8 bits), Expect = 2.7e-113, Sum P(3) = 2.7e-113
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQE-----PQERVHKRRKAEFSVPSVPFIDGASAQVRD 812
T S ++ + S K+KK+G E P K +K +V + + D +S +
Sbjct: 1457 TTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAV--IKYKDSSSGRQLS 1514
Query: 813 WSYGNL-SKRDATRFYRAVMK 832
+ L S+++ +Y + K
Sbjct: 1515 EVFIQLPSRKELPEYYELIRK 1535
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 1065 (380.0 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
Identities = 227/497 (45%), Positives = 328/497 (65%)
Query: 164 KLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 223
K+ EQP L GGKL++YQ++GL ++V+ + N N ILADEMGLGKT+QS+S++ +L +
Sbjct: 488 KITEQPTILVGGKLKEYQMKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLVTYLIEKK 547
Query: 224 QIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIK 283
FL++VPLST++NW EF KW P++ VIVY G++ R Q D + G
Sbjct: 548 H-ENKFLIIVPLSTITNWTLEFEKWAPSIKVIVYKGSQQQRRSLQP-----DIRYGN--- 598
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTL-SEFSTKNKLLITGT 342
F LLTTYE V++++ +L+K ++++++DE HR+KN++++L TL + + TKN+L++TGT
Sbjct: 599 FQVLLTTYEYVIRERPMLAKFHYSHMIIDEGHRMKNAQSKLSQTLRTYYKTKNRLILTGT 658
Query: 343 PLQNSVEELWALLHFLDHDKF---KSKDDFIQN-YKNLSSFNENELAN---------LHM 389
PLQN++ ELWALL+F+ F KS DD+ + N + + EL LH
Sbjct: 659 PLQNNLPELWALLNFVLPGIFNSVKSFDDWFNTPFANTGAQEKIELTEEESLLVIRRLHK 718
Query: 390 ELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVS- 448
LRP +LRR+ KDVEK LP K+E++L+ +S LQ Y+ +L+ N + V G +
Sbjct: 719 VLRPFLLRRLKKDVEKDLPDKVEKVLKCNLSGLQYVLYQQMLKHNALFVGADVGGAKSGI 778
Query: 449 --LLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLH 506
L N +++L+K CNHPF+FE + ND + R+ SGK +LD++L +
Sbjct: 779 KGLNNKIMQLRKICNHPFVFEEVESVLNSSRLTNDL--IWRV---SGKFELLDRVLPKFK 833
Query: 507 ETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFL 566
++ HRVL+F QM +++DI+ +++ +K ++ RLDGSTKAE R + FNAP S+ FCFL
Sbjct: 834 KSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDMLKVFNAPDSDYFCFL 893
Query: 567 LSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEED 626
LSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAHRIGQ+ V I R +T+ SVEE
Sbjct: 894 LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITNDSVEEV 953
Query: 627 ILERAKKKMVLDHLVIQ 643
ILERA +K+ +D VIQ
Sbjct: 954 ILERAHQKLDIDGKVIQ 970
Score = 56 (24.8 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 31 KSFAELQNL-SGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVER 89
K+ EL L S + K+L + K+ ++ F K + E + DV+ + LDI +QV +
Sbjct: 42 KNKEELNELLSKYYKLLFDSNKLKKE--FEKSEDKSEGKFEDVNAQAKLDIESVLAQVSK 99
Query: 90 IIADRISKDSSGNVTQEYLVKWKGLSYAE 118
+ I KD S + + + KG +E
Sbjct: 100 EHEEYI-KDESEFMQELFSENLKGTIKSE 127
Score = 41 (19.5 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 108 LVKWKGLSYAEATWEKDEIID-FAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLD 166
LV K S +EA + +D + I+ + + E+ K ++ K+ +LR D
Sbjct: 347 LVVEKSTSRSEAKYVRDHYRSHYLVRQINNF--HQTTEKEESKKLERTAKQRLQALRSND 404
Query: 167 EQPEWLRGGKLRDYQLEGL 185
E+ K +D+++ L
Sbjct: 405 EEAYLKLLDKTKDHRITHL 423
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 1065 (380.0 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 244/585 (41%), Positives = 355/585 (60%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY +A +A +G + A ++D+Q + G L+ YQ++G
Sbjct: 698 IIENAKQDVDDEYGVSQA-LA-RG--LQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKG 753
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VPLSTLSNWA E
Sbjct: 754 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYE 813
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN LLTTYE ++KDK +L+KI
Sbjct: 814 FDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYIIKDKHILAKI 865
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+FL F
Sbjct: 866 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 925
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 926 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 985
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 986 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1045
Query: 468 SADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIL 525
+ + L+ + +SGK +LD++L +L T H+VL+F QM ++ I+
Sbjct: 1046 HIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIM 1104
Query: 526 AEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVI 585
+Y +Y+GF++ RLDG+TKAE R + FN PGSE F LLSTRAGGLG+NL +ADTVI
Sbjct: 1105 EDYFAYRGFKYLRLDGTTKAEDRGMLLT-FNEPGSEYF-ILLSTRAGGLGLNLQSADTVI 1162
Query: 586 IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKL 645
IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 1163 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA- 1221
Query: 646 NAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
G + +K L AIL ++ +++ D+E+ +++
Sbjct: 1222 ---GMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMI 1263
Score = 53 (23.7 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+KD+ + + DEY A + Q K + ++K K +K E E
Sbjct: 537 KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAE 585
Score = 44 (20.5 bits), Expect = 2.6e-112, Sum P(3) = 2.6e-112
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 1179 HEEELYKQDRMTMRLWNYVSTFSNLSG--EKLHQIYSKLKQERQEEAG 1224
H +E+ D +T + W L E++ Q S K++R +AG
Sbjct: 1330 HRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAG 1377
Score = 43 (20.2 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P + K+ KK K ++ R ++ P KE E
Sbjct: 1395 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYK-DSSSGRQLSEVFIQLPSRKELPE 1453
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ FK++K E + + R+L L++
Sbjct: 1454 YYELIRKPVDFKKIK-----ERIRNHKYRSLNDLEK 1484
Score = 42 (19.8 bits), Expect = 3.1e-114, Sum P(4) = 3.1e-114
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQE-----PQERVHKRRKAEFSVPSVPFIDGASAQVRD 812
T S ++ + S K+KK+G E P K +K +V + + D +S +
Sbjct: 1382 TTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAV--IKYKDSSSGRQLS 1439
Query: 813 WSYGNL-SKRDATRFYRAVMK 832
+ L S+++ +Y + K
Sbjct: 1440 EVFIQLPSRKELPEYYELIRK 1460
Score = 40 (19.1 bits), Expect = 6.9e-112, Sum P(3) = 6.9e-112
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEE+ ++D +
Sbjct: 1238 QAILEHEEQDEEEDEV 1253
Score = 37 (18.1 bits), Expect = 2.5e-114, Sum P(4) = 2.5e-114
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 643 QKLNAEGSWRRKKQRKGNELS------AILRFGAEELFKEDRNDEESKKR 686
+K+ GS RK+ + L+ AI EE+ +E R + S+KR
Sbjct: 1321 EKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKR 1370
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 1071 (382.1 bits), Expect = 3.7e-114, Sum P(4) = 3.7e-114
Identities = 253/656 (38%), Positives = 375/656 (57%)
Query: 71 DVSKEMDLDI-IKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDF 129
D K L+ ++ N E +A R + SG+ +E + + +S AE+ E+ ++ID
Sbjct: 612 DAPKSSQLEAWLEMNPGYE--VAPRSDSEESGSDFEEEDDE-EVVSRAES--EEKKVIDP 666
Query: 130 AQDAIDEYKAR---EAAMAE-------QGKMVDLQRKKGKAS--LRKLDEQPEWLRGGKL 177
D + E A+ E+A + Q Q G A + ++D+Q +L G L
Sbjct: 667 NSDEVSETAAKHIIESAKQDVDDEYSSQAGQTSSQSYYGVAHAVIERVDKQSTFLINGTL 726
Query: 178 RDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLST 237
+ YQ++GL ++V+ + N+ N ILADEMGLGKT+Q++ ++ +L +++ GP+L++VPLST
Sbjct: 727 KQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMELKRLNGPYLIIVPLST 786
Query: 238 LSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKD 297
LSNW E KW P++ I Y GT + R + G KFN L+TTYE ++KD
Sbjct: 787 LSNWVYELDKWAPSIVKIAYKGTPSMRR-----SLVPQLRSG---KFNVLITTYEYIIKD 838
Query: 298 KAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLH 356
K +L+KI+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWALL+
Sbjct: 839 KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLN 898
Query: 357 FLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEK 405
FL FKS F Q + NE E + LH LRP +LRR+ K+VE
Sbjct: 899 FLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVES 958
Query: 406 SLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCC 460
LP K+E +++ +MS +QK Y K IL + + +K +G +L+N +++LKK C
Sbjct: 959 QLPEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKIC 1018
Query: 461 NHPFLFESADHGYGGDTSI-NDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMV 519
NHP++F+ + + N + +SGK +LD++L +L T HRVL+F QM
Sbjct: 1019 NHPYMFQHIEESFAEHLGFPNGIISGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMT 1078
Query: 520 RMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLA 579
++ IL +Y Y+ F + RLDG+TK+E R + FN GS+ F FLLSTRAGGLG+NL
Sbjct: 1079 SLMTILEDYFGYRNFLYLRLDGTTKSEDRAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQ 1138
Query: 580 TADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDH 639
ADTV+IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D
Sbjct: 1139 AADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ 1198
Query: 640 LVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLLGMDID 693
VIQ G + +K L AIL + + +++ D+E+ +++ + D
Sbjct: 1199 KVIQA----GMFDQKSSSHERRAFLQAILEHEEQNMEEDEVPDDETLNQMIARNED 1250
Score = 42 (19.8 bits), Expect = 3.7e-114, Sum P(4) = 3.7e-114
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEE+ ++D +
Sbjct: 1220 QAILEHEEQNMEEDEV 1235
Score = 41 (19.5 bits), Expect = 1.4e-111, Sum P(3) = 1.4e-111
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1024 GREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRF--HKPQRVEQPLTKEEGEMSDN 1081
GR+ SE + +P SR + + + V+F+ K+R HK + V L K+ + N
Sbjct: 1404 GRQLSEVFVQLP-SRKELPEYYELIRKPVDFKKIKERVRSHKYRSVSD-LEKDVMLLCHN 1461
Query: 1082 EEVY 1085
+ Y
Sbjct: 1462 AQTY 1465
Score = 39 (18.8 bits), Expect = 3.7e-114, Sum P(4) = 3.7e-114
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 1279 EAWKRRRRAETDMYSQAQPMLQRPMN 1304
+A KRR R + S P L + MN
Sbjct: 1365 KAKKRRGRPPAEKLSPNPPKLTKQMN 1390
Score = 39 (18.8 bits), Expect = 3.7e-114, Sum P(4) = 3.7e-114
Identities = 10/55 (18%), Positives = 28/55 (50%)
Query: 55 DVRFRKMVSREEIELNDVSKEMDLDII---KQNSQVERIIADRISKDSSGNVTQE 106
D+R + V + + L + +++ LD++ ++++ +E + + K S +E
Sbjct: 374 DLRTKATVELKALRLLNFQRQLRLDVVACMRRDTTLETALNSKAYKRSKRQTLRE 428
Score = 37 (18.1 bits), Expect = 1.3e-113, Sum P(4) = 1.3e-113
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 1090 EVKWMEWCEDVMADEIRTLQRLQR 1113
E +W+ ED +EI RL+R
Sbjct: 1324 EKQWLRAIEDGNLEEIEEEIRLKR 1347
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 1064 (379.6 bits), Expect = 7.1e-114, Sum P(4) = 7.1e-114
Identities = 251/595 (42%), Positives = 354/595 (59%)
Query: 122 EKD--EIIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLR 178
EKD +II+ A QD DEY + +A Q A ++++Q L G L+
Sbjct: 678 EKDARQIIETAKQDVDDEYSMQYSARGSQSYYT-----VAHAISERVEKQSALLINGTLK 732
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
YQL+GL ++V+ + N+ N ILADEMG GKT+Q+++++ +L + + GP+L++VPLSTL
Sbjct: 733 HYQLQGLEWMVSLYNNNLNGILADEMGPGKTIQTIALITYLMEHKGLNGPYLIIVPLSTL 792
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
SNW EF KW P+ I Y GT A R + G KFN LLTTYE ++KDK
Sbjct: 793 SNWTYEFDKWAPSAVKISYKGTPAMRR-----SLVPQLRSG---KFNALLTTYEYIIKDK 844
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHF 357
+L+KI+W Y++VDE HR+KN +L L+ + ++L+TGTPLQN + ELWALL+F
Sbjct: 845 HILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNF 904
Query: 358 LDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKS 406
L FKS F Q + NE E + LH LRP +LRR+ K+VE
Sbjct: 905 LLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQ 964
Query: 407 LPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCN 461
LP K+E +++ +MS LQK Y K IL + + +K +G +L+N +++L+K CN
Sbjct: 965 LPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICN 1024
Query: 462 HPFLF----ES-ADH-GYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIF 515
HP++F ES A+H GY IN ++L R +SGK +LD++L +L T HRVL+F
Sbjct: 1025 HPYMFQHIEESFAEHLGYSNGV-ING-AELYR---ASGKFELLDRILPKLRATNHRVLLF 1079
Query: 516 SQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLG 575
QM ++ I+ +Y +++ F + RLDG+TK+E R + FN PGS+ F FLLSTRAGGLG
Sbjct: 1080 CQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLG 1139
Query: 576 INLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKM 635
+NL ADTV+IFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+
Sbjct: 1140 LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1199
Query: 636 VLDHLVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
+D VIQ G + +K L AIL E +++ D+E+ +++
Sbjct: 1200 NVDQKVIQA----GMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMI 1250
Score = 48 (22.0 bits), Expect = 1.1e-113, Sum P(4) = 1.1e-113
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 1054 FQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
F++ + + K + E+ +EE E D EE + K VK
Sbjct: 1506 FKSARQKIAKEEESEEESNEEEEE-EDEEESEAEAKSVK 1543
Score = 47 (21.6 bits), Expect = 2.6e-111, Sum P(3) = 2.6e-111
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 632 KKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
K M+L H Q N EGS + L ++ + +++ KE+ ++EES +
Sbjct: 1476 KDVMLLCHNA-QTFNLEGS---QIYEDSIVLQSVFKSARQKIAKEEESEEESNE 1525
Score = 44 (20.5 bits), Expect = 7.1e-114, Sum P(4) = 7.1e-114
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEEE ++D +
Sbjct: 1225 QAILEHEEENEEEDEV 1240
Score = 44 (20.5 bits), Expect = 7.1e-114, Sum P(4) = 7.1e-114
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 1252 ERQKGHKNVSTYQMTEPIHKGIDPKKFEAWKRRRRAETDMYSQAQPMLQRPMN 1304
+++K +NV +P+ + ++ K KRR R + S P L + MN
Sbjct: 1351 KKRKRRRNVDK----DPVKEDVEKAK----KRRGRPPAEKLSPNPPKLTKQMN 1395
Score = 44 (20.5 bits), Expect = 5.4e-111, Sum P(3) = 5.4e-111
Identities = 9/42 (21%), Positives = 21/42 (50%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
+ A+ +S E+NE E ++ +E + + ++ +K E
Sbjct: 1512 KIAKEEESEEESNEEEEEEDEEESEAEAKSVKVKIKLNKKEE 1553
Score = 41 (19.5 bits), Expect = 7.1e-114, Sum P(4) = 7.1e-114
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDL--QRKKGKASLRKLDEQPE 170
+KD + + DEY A + + K ++KK + +K +E E
Sbjct: 528 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRRKKAEENAE 578
Score = 38 (18.4 bits), Expect = 1.1e-113, Sum P(4) = 1.1e-113
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 983 ETFLPRAPNLKERANALLEMELXXXXXXXXXXXXXR-----KASKKGREKSENILNMPIS 1037
E P P L ++ NA+++ + + + GR+ SE + +P S
Sbjct: 1381 EKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLP-S 1439
Query: 1038 RLKRDKKGKPGSAKVNFQTTKDRF--HK 1063
R + + + V+F+ K+R HK
Sbjct: 1440 RKELPEYYELIRKPVDFKKIKERIRNHK 1467
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 1090 (388.8 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 236/509 (46%), Positives = 334/509 (65%)
Query: 175 GKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVP 234
G ++ YQLEGLN+L +R N ILADEMGLGKT+Q++S+L +L+ + I +++ P
Sbjct: 320 GTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIKKKSIIICP 379
Query: 235 LSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVV 294
STL NW +E +KW M Y G + R+ + ++D F+ LLTTYE+V
Sbjct: 380 RSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRNLLHSD--------FDVLLTTYEIV 431
Query: 295 LKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWAL 354
+KDK+ L I W +L++DEAHR+KN ++ L +++ ++N+LLITGTPL N+++ELW+L
Sbjct: 432 IKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSL 491
Query: 355 LHFLDHDKFKSKDDFIQNYKNLS--SFNENE----LANLHMELRPHILRRIIKDVEKSLP 408
L+FL F + ++F N N+S S N+N+ + LH L+P +LRR+ +VE+SLP
Sbjct: 492 LNFLMPKIFDNSEEF-DNLFNISKISTNDNKQSEIITQLHTILKPFMLRRLKVEVEQSLP 550
Query: 409 PKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFES 468
PK E + V MS LQK+ Y IL +N LN + G++ +LNI+++L+KCCNHP+LF+
Sbjct: 551 PKREIYIFVGMSKLQKKLYSDILSKNIDVLN-AMTGSKNQMLNILMQLRKCCNHPYLFDG 609
Query: 469 ADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEY 528
+ I +E +SGK+ +LDKLL RL + RVL+FSQM R+LDI+ +Y
Sbjct: 610 IEE----PPYIEGNHLIE----TSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDY 661
Query: 529 MSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFD 588
+K + + R+DGST + R ++ FN P S+ F FLLSTRAGG+GINL TAD VI+FD
Sbjct: 662 CRWKNYPYLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFD 721
Query: 589 SDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK--LN 646
SD+NPQ D+QAM RAHRIGQ++ V +YRFVT SVEE I+ERA KK+ LD L+IQK LN
Sbjct: 722 SDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLN 781
Query: 647 AEGSWRRKKQRKGNELSAILRFGAEELFK 675
+ KQ EL IL FGA E++K
Sbjct: 782 LNSAKENNKQ----ELHDILNFGAPEVYK 806
Score = 48 (22.0 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 20/114 (17%), Positives = 50/114 (43%)
Query: 1064 PQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLPK 1123
P+++ T + + ++ K+ K + +D+ + +I + +LQ+ + K
Sbjct: 1152 PEKINNNDTNNNKSTTLKNKKLKKGKQTKNVNVEKDIASVDIEKI-KLQKQELMKQGFAK 1210
Query: 1124 EKVASVFPSFCWHIPLY--SRIKHLTSLLFFHFIQVLSKIRNYLQLIGRRIDQI 1175
A F + +Y + ++++ F + + + I+ YL + R+ DQI
Sbjct: 1211 WNKAE-FNKLMSGLIIYGTNEVEYIYEKYFSNSKKSMEDIKAYLTVFFRKYDQI 1263
Score = 39 (18.8 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 1042 DKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEW 1096
+K P + + +F ++ + + V+ T+ E + NEE+ +E K + W
Sbjct: 1306 EKLQLPSNLRYDFMEKREVLNITEEVK---TENEENVLSNEELAYYDRENKILLW 1357
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 1090 (388.8 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 236/509 (46%), Positives = 334/509 (65%)
Query: 175 GKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVP 234
G ++ YQLEGLN+L +R N ILADEMGLGKT+Q++S+L +L+ + I +++ P
Sbjct: 320 GTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIKKKSIIICP 379
Query: 235 LSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVV 294
STL NW +E +KW M Y G + R+ + ++D F+ LLTTYE+V
Sbjct: 380 RSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRNLLHSD--------FDVLLTTYEIV 431
Query: 295 LKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWAL 354
+KDK+ L I W +L++DEAHR+KN ++ L +++ ++N+LLITGTPL N+++ELW+L
Sbjct: 432 IKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSL 491
Query: 355 LHFLDHDKFKSKDDFIQNYKNLS--SFNENE----LANLHMELRPHILRRIIKDVEKSLP 408
L+FL F + ++F N N+S S N+N+ + LH L+P +LRR+ +VE+SLP
Sbjct: 492 LNFLMPKIFDNSEEF-DNLFNISKISTNDNKQSEIITQLHTILKPFMLRRLKVEVEQSLP 550
Query: 409 PKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFES 468
PK E + V MS LQK+ Y IL +N LN + G++ +LNI+++L+KCCNHP+LF+
Sbjct: 551 PKREIYIFVGMSKLQKKLYSDILSKNIDVLN-AMTGSKNQMLNILMQLRKCCNHPYLFDG 609
Query: 469 ADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEY 528
+ I +E +SGK+ +LDKLL RL + RVL+FSQM R+LDI+ +Y
Sbjct: 610 IEE----PPYIEGNHLIE----TSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDY 661
Query: 529 MSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFD 588
+K + + R+DGST + R ++ FN P S+ F FLLSTRAGG+GINL TAD VI+FD
Sbjct: 662 CRWKNYPYLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFD 721
Query: 589 SDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK--LN 646
SD+NPQ D+QAM RAHRIGQ++ V +YRFVT SVEE I+ERA KK+ LD L+IQK LN
Sbjct: 722 SDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLN 781
Query: 647 AEGSWRRKKQRKGNELSAILRFGAEELFK 675
+ KQ EL IL FGA E++K
Sbjct: 782 LNSAKENNKQ----ELHDILNFGAPEVYK 806
Score = 48 (22.0 bits), Expect = 2.6e-113, Sum P(2) = 2.6e-113
Identities = 20/114 (17%), Positives = 50/114 (43%)
Query: 1064 PQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLPK 1123
P+++ T + + ++ K+ K + +D+ + +I + +LQ+ + K
Sbjct: 1152 PEKINNNDTNNNKSTTLKNKKLKKGKQTKNVNVEKDIASVDIEKI-KLQKQELMKQGFAK 1210
Query: 1124 EKVASVFPSFCWHIPLY--SRIKHLTSLLFFHFIQVLSKIRNYLQLIGRRIDQI 1175
A F + +Y + ++++ F + + + I+ YL + R+ DQI
Sbjct: 1211 WNKAE-FNKLMSGLIIYGTNEVEYIYEKYFSNSKKSMEDIKAYLTVFFRKYDQI 1263
Score = 39 (18.8 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 1042 DKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWMEW 1096
+K P + + +F ++ + + V+ T+ E + NEE+ +E K + W
Sbjct: 1306 EKLQLPSNLRYDFMEKREVLNITEEVK---TENEENVLSNEELAYYDRENKILLW 1357
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 1056 (376.8 bits), Expect = 2.9e-113, Sum P(4) = 2.9e-113
Identities = 242/587 (41%), Positives = 355/587 (60%)
Query: 126 IIDFA-QDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEG 184
II+ A QD DEY A + +G + A K+++Q L G+L+ YQ++G
Sbjct: 719 IIEHAKQDVDDEY-GNSAFI--RG--LQSYYAVAHAVTEKVEKQSSLLVNGQLKQYQIKG 773
Query: 185 LNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKE 244
L +LV+ + N+ N ILADEMGLGKT+Q+++++ +L +++ GPFL++VPLSTLSNW E
Sbjct: 774 LEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEFKRLNGPFLIIVPLSTLSNWVYE 833
Query: 245 FRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKI 304
F KW P++ + Y G+ A+R F + G KFN L+TTYE ++KDK VL+K+
Sbjct: 834 FDKWAPSVVKVSYKGSPAARRA-----FLPILRSG---KFNVLVTTYEYIIKDKQVLAKL 885
Query: 305 KWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
+W Y++VDE HR+KN +L L+ + ++L+TGTPLQN + ELWALL+FL F
Sbjct: 886 RWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIF 945
Query: 364 KSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPPKIE 412
KS F Q + NE E + LH LRP +LRR+ K+VE LP K+E
Sbjct: 946 KSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVE 1005
Query: 413 RILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+++ +MS LQ+ Y K +L + + +K +G +L+N +++L+K CNHP++F+
Sbjct: 1006 YVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1065
Query: 468 SADHGYG---GDTS-INDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLD 523
+ + G T I S L R +SGK +LD++L +L T H+VL+F QM ++
Sbjct: 1066 HIEESFSEHLGFTGGIVQGSDLYR---ASGKFELLDRILPKLRATNHKVLLFCQMTTLMT 1122
Query: 524 ILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADT 583
I+ +Y +Y+ F++ RLDG+TKAE R + +FN P + F FLLSTRAGGLG+NL +ADT
Sbjct: 1123 IMEDYFAYRNFKYLRLDGTTKAEDRGMLLKNFNDPSHQYFIFLLSTRAGGLGLNLQSADT 1182
Query: 584 VIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
VIIFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+ +D VIQ
Sbjct: 1183 VIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ 1242
Query: 644 KLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
G + +K L AIL ++ +++ D+E+ +++
Sbjct: 1243 A----GMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMI 1285
Score = 50 (22.7 bits), Expect = 2.9e-113, Sum P(4) = 2.9e-113
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P S K+ KK A + ++ R ++ P KE E
Sbjct: 1420 KKQKKRGRPPAEKLSPNPPSLTKKMKKTV--DAVIKYKDGNGRQLSEVFIQLPSRKELPE 1477
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ F+++K E + + + R+L L++
Sbjct: 1478 YYELIRKPVDFRKIK-----ERIRSHKYRSLNDLEK 1508
Score = 45 (20.9 bits), Expect = 2.9e-113, Sum P(4) = 2.9e-113
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGG 175
+KD+ + + DEY A + K + K K +K ++PE GG
Sbjct: 563 KKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKDKKK---KKKKKKPENAEGG 613
Score = 45 (20.9 bits), Expect = 2.9e-113, Sum P(4) = 2.9e-113
Identities = 36/168 (21%), Positives = 68/168 (40%)
Query: 35 ELQNLSG-----FKKVLNYAKKVVEDVRFRKMVSREEIEL--NDVSKEMDLDI-----IK 82
EL+NL G + N K + + F++ + +E + D + E L+ K
Sbjct: 402 ELENLPGSLAGDLRTKANIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSK 461
Query: 83 QNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREA 142
+ S E I +++ K + QE + K Y + I+ A+D + +++ A
Sbjct: 462 RQSLREARITEKLEKQQK--IEQERKRRQKHQEYLNS------ILQHAKDFKEYHRSITA 513
Query: 143 AMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVN 190
M + K V + +K +E+ E R +L EG L++
Sbjct: 514 KMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLID 561
Score = 40 (19.1 bits), Expect = 2.9e-113, Sum P(4) = 2.9e-113
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 643 QKLNAEGSWRRKKQRKGNELS------AILRFGAEELFKEDRNDEESKKRLLGMDID 693
+K+ GS +RK+ + L+ AI +E+ +E R+ + ++KR D+D
Sbjct: 1343 EKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLDEIEEEVRHKKTTRKRKRDRDLD 1399
Score = 40 (19.1 bits), Expect = 7.6e-110, Sum P(3) = 7.6e-110
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEE+ ++D +
Sbjct: 1260 QAILEHEEQDEEEDEV 1275
Score = 38 (18.4 bits), Expect = 5.3e-112, Sum P(4) = 5.3e-112
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 1065 QRVEQPLTKEEGEMSDNEE 1083
Q++E+ + EG+ S+ EE
Sbjct: 1543 QKIEKEEEESEGDDSEEEE 1561
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 1074 (383.1 bits), Expect = 4.6e-113, Sum P(4) = 4.6e-113
Identities = 264/664 (39%), Positives = 397/664 (59%)
Query: 50 KKVVEDVRFRKMVSREE-IELNDVSKEMDLD-IIKQ-NSQVERIIADRISKDSSGNVTQE 106
KK E ++ K E I+L D +K+ + +++Q N+ ++ + R KD Q+
Sbjct: 650 KKAKERLQALKANDEEAYIKLLDQTKDTRITHLLRQTNAFLDSLT--RAVKDQ-----QK 702
Query: 107 YLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLD 166
Y + EA+ E D++ + + K E + VD + +
Sbjct: 703 YTKEMIDSHIKEASEEVDDL-----SMVPKMKDEEYDDDDDNSNVDYYNVAHRIK-EDIK 756
Query: 167 EQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIP 226
+QP L GG L+DYQ++GL ++V+ + N N ILADEMGLGKT+Q++S+L +L + I
Sbjct: 757 KQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIR 816
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNT 286
GP+LV+VPLSTLSNW+ EF KW PT+ I + G+ R+ Q K+ R +F+
Sbjct: 817 GPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQA-------KI-RAGEFDV 868
Query: 287 LLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQ 345
+LTT+E ++K++A+LSK+KW ++++DE HR+KN++++L TL+ + +L++TGTPLQ
Sbjct: 869 VLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQ 928
Query: 346 NSVEELWALLHFLDHDKF---KSKDDFIQN-YKNLSSFNENELAN---------LHMELR 392
N++ ELWALL+F+ F KS D++ + N ++ EL+ LH LR
Sbjct: 929 NNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLR 988
Query: 393 PHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQ--VSLL 450
P +LRR+ KDVEK LP K+E++++ +MS LQ+ Y+ +L+ + L G + N+ V L
Sbjct: 989 PFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLK--YRRLFIGDQNNKKMVGLR 1046
Query: 451 ---NIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHE 507
N +++LKK CNHPF+FE + ND + R+ +GK +LD++L +L
Sbjct: 1047 GFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDD--IWRV---AGKFELLDRILPKLKA 1101
Query: 508 TKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLL 567
T HRVLIF QM +++DI+ +++ Y ++ RLDG TK++ R + + FNAP SE CF+L
Sbjct: 1102 TGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFIL 1161
Query: 568 STRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDI 627
STRAGGLG+NL TADTVIIFD+DWNP DLQA RAHRIGQ+ V I R +T+ SVEE I
Sbjct: 1162 STRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVI 1221
Query: 628 LERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRL 687
LERA KK+ +D VIQ G + K + E A+LR L D +E KKR
Sbjct: 1222 LERAYKKLDIDGKVIQA----GKFDNKSTSEEQE--ALLR----SLL--DAEEERRKKRE 1269
Query: 688 LGMD 691
G++
Sbjct: 1270 SGVE 1273
Score = 40 (19.1 bits), Expect = 4.6e-113, Sum P(4) = 4.6e-113
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 646 NAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKR 686
N G+ RK + +S E+ +++ND++++K+
Sbjct: 1347 NGRGARERKTATYNDNMSEEQWLRQFEVSDDEKNDKQARKQ 1387
Score = 40 (19.1 bits), Expect = 4.6e-113, Sum P(4) = 4.6e-113
Identities = 20/64 (31%), Positives = 25/64 (39%)
Query: 746 AEDALAPRAARNTKSYA----EANEPE-RSNKRKKKGSELQEPQERVHKRRKAEFSVPSV 800
AED A N + +A P R K K +GSE EP + S PS
Sbjct: 1423 AEDRADTDLAMNDDDFLSKKRKAGRPRGRPKKVKLEGSENSEPPALESSPVTGDNS-PSE 1481
Query: 801 PFID 804
F+D
Sbjct: 1482 DFMD 1485
Score = 39 (18.8 bits), Expect = 4.6e-113, Sum P(4) = 4.6e-113
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 1185 KQDRMTMRLWNYVSTFSNLSGEKLHQIY 1212
K + + L+++ + N +G KL I+
Sbjct: 1549 KVAKQALDLYHFALNYENEAGRKLSDIF 1576
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 1068 (381.0 bits), Expect = 7.3e-113, Sum P(3) = 7.3e-113
Identities = 231/535 (43%), Positives = 333/535 (62%)
Query: 175 GKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVP 234
G L+ YQ++GL +LV+ + N+ N ILADEMGLGKT+Q+++++ +L ++I GPFL++VP
Sbjct: 4 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 63
Query: 235 LSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVV 294
LSTLSNWA EF KW P++ + Y G+ A+R F + G KFN LLTTYE +
Sbjct: 64 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA-----FVPQLRSG---KFNVLLTTYEYI 115
Query: 295 LKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLITGTPLQNSVEELWA 353
+KDK +L+KI+W Y++VDE HR+KN +L L+ + +LL+TGTPLQN + ELWA
Sbjct: 116 IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWA 175
Query: 354 LLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKD 402
LL+FL FKS F Q + NE E + LH LRP +LRR+ K+
Sbjct: 176 LLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKE 235
Query: 403 VEKSLPPKIERILRVEMSPLQKQYY-----KWILERNFHDLNKGVRGNQVSLLNIVVELK 457
VE LP K+E +++ +MS LQ+ Y K +L + + +K +G +L+N +++L+
Sbjct: 236 VEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLR 295
Query: 458 KCCNHPFLFESADHGYGGDTSIND--TSKLERIILSSGKLVILDKLLVRLHETKHRVLIF 515
K CNHP++F+ + + L+ + +SGK +LD++L +L T H+VL+F
Sbjct: 296 KICNHPYMFQHIEESFSEHLGFTGGIVQGLD-LYRASGKFELLDRILPKLRATNHKVLLF 354
Query: 516 SQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLG 575
QM ++ I+ +Y +Y+GF++ RLDG+TKAE R + FN PGSE F FLLSTRAGGLG
Sbjct: 355 CQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLG 414
Query: 576 INLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKM 635
+NL +ADTVIIFDSDWNP DLQA RAHRIGQQ V + R T SVEE IL AK K+
Sbjct: 415 LNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 474
Query: 636 VLDHLVIQKLNAEGSWRRKKQRKGNE--LSAILRFGAEELFKEDRNDEESKKRLL 688
+D VIQ G + +K L AIL ++ +++ D+E+ +++
Sbjct: 475 NVDQKVIQA----GMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMI 525
Score = 44 (20.5 bits), Expect = 1.5e-110, Sum P(2) = 1.5e-110
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 1179 HEEELYKQDRMTMRLWNYVSTFSNLSG--EKLHQIYSKLKQERQEEAG 1224
H +E+ D +T + W L E++ Q S K++R +AG
Sbjct: 592 HRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAG 639
Score = 43 (20.2 bits), Expect = 7.3e-113, Sum P(3) = 7.3e-113
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K K+GR +E + P + K+ KK K ++ R ++ P KE E
Sbjct: 657 KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYK-DSSSGRQLSEVFIQLPSRKELPE 715
Query: 1078 MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQR 1113
+ FK++K E + + R+L L++
Sbjct: 716 YYELIRKPVDFKKIK-----ERIRNHKYRSLNDLEK 746
Score = 42 (19.8 bits), Expect = 9.3e-113, Sum P(3) = 9.3e-113
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 758 TKSYAEANEPERSNKRKKKGSELQE-----PQERVHKRRKAEFSVPSVPFIDGASAQVRD 812
T S ++ + S K+KK+G E P K +K +V + + D +S +
Sbjct: 644 TTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAV--IKYKDSSSGRQLS 701
Query: 813 WSYGNL-SKRDATRFYRAVMK 832
+ L S+++ +Y + K
Sbjct: 702 EVFIQLPSRKELPEYYELIRK 722
Score = 40 (19.1 bits), Expect = 3.9e-110, Sum P(2) = 3.9e-110
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1174 QIVLEHEEELYKQDRM 1189
Q +LEHEE+ ++D +
Sbjct: 500 QAILEHEEQDEEEDEV 515
Score = 37 (18.1 bits), Expect = 7.3e-113, Sum P(3) = 7.3e-113
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 643 QKLNAEGSWRRKKQRKGNELS------AILRFGAEELFKEDRNDEESKKR 686
+K+ GS RK+ + L+ AI EE+ +E R + S+KR
Sbjct: 583 EKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKR 632
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 1065 (380.0 bits), Expect = 9.3e-113, Sum P(3) = 9.3e-113
Identities = 237/537 (44%), Positives = 334/537 (62%)
Query: 164 KLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 223
K+ +QP L+GG+LR YQLEGL ++V+ + ND N ILADEMGLGKT+Q+++++ +L ++
Sbjct: 373 KVTKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESK 432
Query: 224 QIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIK 283
+ GP L++ P + L NW EF W P+++ +Y G++ R + + G K
Sbjct: 433 DLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRA------RIAGG--K 484
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSE-FSTKNKLLITGT 342
FN L+T Y+++++DKA L KI WNY++VDE HRLKN E L TL + K +LL+TGT
Sbjct: 485 FNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGT 544
Query: 343 PLQNSVEELWALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENELA---NLHMELR 392
P+QNS++ELW+LL+FL F S +F + + + S +E EL LH +R
Sbjct: 545 PIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIR 604
Query: 393 PHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNI 452
P +LRR +VEK LP K + IL+ +MS QK YYK + + L+ G G SL N+
Sbjct: 605 PFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSG-NGKSKSLQNL 663
Query: 453 VVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRV 512
++L+KCCNHP+LF AD+ N K E I+ +SGK +LD+LL +L + HR+
Sbjct: 664 TMQLRKCCNHPYLFVGADY--------NMCKKPE-IVRASGKFELLDRLLPKLKKAGHRI 714
Query: 513 LIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAG 572
L+FSQM R++D+L Y+S + + RLDGSTK + R + FN P S F FLLSTRAG
Sbjct: 715 LLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAG 774
Query: 573 GLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAK 632
GLG+NL TADT+IIFDSDWNPQ D QA RAHRIGQ++ V ++ V+ S+EE ILERAK
Sbjct: 775 GLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAK 834
Query: 633 KKMVLDHLVIQK--LNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRL 687
+KM +D VIQ N + + +++ L I+ G L ED E RL
Sbjct: 835 QKMGIDAKVIQAGLFNTTSTAQDRREM----LEEIMSKGTSSL-GEDVPSEREINRL 886
Score = 44 (20.5 bits), Expect = 9.3e-113, Sum P(3) = 9.3e-113
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 736 RWIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
+W+K ++ED A + ++ K +K + SE E +E + RK E
Sbjct: 962 QWMK---AMESEDEDASKVSQKRKRTDTKTRMSNGSKAEAVLSESDEEKEEEEEERKEE 1017
Score = 42 (19.8 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 763 EANEPERSNKRKKKGSELQEPQER-VH-----KRRKAEFSV 797
E E E ++++ G E +E E+ +H K++++ + V
Sbjct: 1005 EEKEEEEEERKEESGKESEEENEKPLHSWKTNKKKRSRYPV 1045
Score = 38 (18.4 bits), Expect = 9.3e-113, Sum P(3) = 9.3e-113
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKG 1045
K +KK R + + + P SR K KG
Sbjct: 1034 KTNKKKRSRYPVMTSSPNSRGKGSSKG 1060
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 1056 (376.8 bits), Expect = 1.1e-112, Sum P(3) = 1.1e-112
Identities = 238/583 (40%), Positives = 357/583 (61%)
Query: 126 IIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK----LRDYQ 181
I++ A++ DEY + + +M D K K+ +Q + GG L+ YQ
Sbjct: 484 ILEKARNEEDEYDQKT-----KKQMADYYATAHKIK-EKVVKQHTTMGGGDPNLLLKPYQ 537
Query: 182 LEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNW 241
++GL ++V+ + N+ N ILADEMGLGKT+Q++S++ +L +Q GP+LV+VPLSTLSNW
Sbjct: 538 IKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLSTLSNW 597
Query: 242 AKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVL 301
EF KW P++ I+Y GT+ +R ++ E + G FN L+TTYE V+K+KA+L
Sbjct: 598 QNEFAKWAPSVTTIIYKGTKDAR---RRVE--GQIRKGA---FNVLMTTYEYVIKEKALL 649
Query: 302 SKIKWNYLMVDEAHRLKNSEAQLYTTLSEF-STKNKLLITGTPLQNSVEELWALLHFLDH 360
KI+W Y+++DE HRLKN +L L+ F +++LL+TGTPLQN + ELWALL+FL
Sbjct: 650 GKIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLP 709
Query: 361 DKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELRPHILRRIIKDVEKSLPP 409
F S F Q + N+ E + LH LRP +LRR+ K+VE LP
Sbjct: 710 SIFSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPD 769
Query: 410 KIERILRVEMSPLQKQYYKWILERNFHD--LNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
K E +++ + S LQK Y+ + + D ++ G R SL+N VV L+K CNHPFLF
Sbjct: 770 KTEYVIKCDQSALQKVIYRHMQKGLLLDAKMSSGAR----SLMNTVVHLRKLCNHPFLFP 825
Query: 468 SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAE 527
+ + +N+ + + ++ +GKL +LD++L +L T HR+L+F QM M++I +
Sbjct: 826 NIEDSCRAYWKVNEVNGTD-LMRVAGKLELLDRILPKLKATGHRILMFFQMTSMMNIFED 884
Query: 528 YMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIF 587
+++++ + + RLDGSTK + R + FNAP S+ F F+LSTRAGGLG+NL TADTVIIF
Sbjct: 885 FLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIF 944
Query: 588 DSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ--KL 645
DSDWNP D+QA RAHRIGQ++ V + R +T+ SVEE IL A+ K+ +D VIQ K
Sbjct: 945 DSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGKF 1004
Query: 646 NAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRLL 688
+ + +KQ L I++ EE +E+ D+E+ +++
Sbjct: 1005 DQRSTGAERKQM----LEQIIQADGEEEEEEEVPDDETVNQMV 1043
Score = 50 (22.7 bits), Expect = 1.1e-112, Sum P(3) = 1.1e-112
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 1040 KRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKE 1090
K+D+K + S+ + KD P K++ E D+E+ E+ +E
Sbjct: 1390 KKDEKKETSSSVKTEEAKKDDEPSTSSASAPPPKKKKESEDSEDPMEEDEE 1440
Score = 43 (20.2 bits), Expect = 1.1e-112, Sum P(3) = 1.1e-112
Identities = 11/52 (21%), Positives = 24/52 (46%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
+KD+ + + DEY ++ Q + + ++KK + K ++ E R
Sbjct: 357 KKDQRLVYLLQQTDEYVDSLCSLVRQHQNTEKKKKKEDKKIEKGNQMDEEAR 408
Score = 40 (19.1 bits), Expect = 2.3e-112, Sum P(3) = 2.3e-112
Identities = 30/117 (25%), Positives = 51/117 (43%)
Query: 74 KEMDLDIIKQNSQVERIIADRISKDSSGN-VTQEYLVKWKGLSYAEATWEKDEIIDFAQD 132
K+ D I K N Q++ + + S+G +T + K + + + T + EI+ Q
Sbjct: 391 KKEDKKIEKGN-QMDEEARVHVRERSTGKALTGDQAPKTEEIEFWLETHPEYEIVPRDQL 449
Query: 133 AIDEYKAREAAMAEQGKMVDLQ------RKKGKASLRKL-DEQPEWLRGGK--LRDY 180
+ DE + E A E + D Q K K L K +E+ E+ + K + DY
Sbjct: 450 SDDEEEEEEEAPVEPEEEKDDQYAGMDEETKAKMILEKARNEEDEYDQKTKKQMADY 506
Score = 40 (19.1 bits), Expect = 1.3e-111, Sum P(3) = 1.3e-111
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 1059 DRFHKPQR-VEQPLTKEE 1075
D+F P + VE+P+ K+E
Sbjct: 1285 DKFMNPPKPVEEPVKKKE 1302
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 1037 (370.1 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 260/659 (39%), Positives = 380/659 (57%)
Query: 54 EDVRFRKMVSREEI---ELNDVSKEMDLD-IIKQNSQVERIIADRISKD---SSGNV-TQ 105
E R +K++ +E + D K+ L +++Q + + D + + ++G++ T+
Sbjct: 239 EKNRIQKLIQEDEEGYRAMLDEKKDQRLVYLLEQTDDYIKSLCDLLKQQQNATAGSLATK 298
Query: 106 EYLVK-WKGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRK 164
Y+ K + G+ AE K I+D A++ DEY+ + E +
Sbjct: 299 SYIRKEYDGV--AEEDKVKS-ILDKARNDDDEYENKTKMNIED------YYTTAHGVREE 349
Query: 165 LDEQPEWLRGG----KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQ 220
+ EQ + GG KL+ YQ++GL ++V+ + N+ N ILADEMGLGKT+Q+++ + +L
Sbjct: 350 IKEQHFMMGGGNPSLKLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLM 409
Query: 221 NAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGR 280
++ GPFLV+VPLST+ NW EF KW +++I Y G + +R+V F K G
Sbjct: 410 EIKKTSGPFLVIVPLSTVPNWQNEFDKWAANVHLIAYKGPKETRKV-----FEPIIKSG- 463
Query: 281 PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS-EFSTKNKLLI 339
KFN LLTT+E V+++KA+L K++W Y+++DE HRLKN +L L+ F + +LLI
Sbjct: 464 --KFNVLLTTFEYVIREKALLGKLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLI 521
Query: 340 TGTPLQNSVEELWALLHFLDHDKFKSKDDFIQ--NYKNLSSFNENELAN---------LH 388
TGTPLQN + ELWALL+FL F S F Q N ++ + EL LH
Sbjct: 522 TGTPLQNKLPELWALLNFLLPSIFSSCSTFEQWFNAPFATTGEKVELTQEETMLIIRRLH 581
Query: 389 MELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVS 448
LRP +LRR+ K+VE LP K+E ++R +MS LQK YK + + D K G++ S
Sbjct: 582 KVLRPFLLRRLKKEVESELPDKMEFVVRCDMSALQKVLYKHMQKGLLLD-GKTNTGSK-S 639
Query: 449 LLNIVVELKKCCNHPFLFESADHGYGG--DTSINDTSKLERIILSSGKLVILDKLLVRLH 506
L N ++ L+K CNHPFLFE+ + D L R+ SGKL +L ++L +L
Sbjct: 640 LRNTMIHLRKLCNHPFLFENVEESCRNFWDARFISAVDLYRV---SGKLELLSRILPKLQ 696
Query: 507 ETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFL 566
T HRVL+F QM M+ I+ ++++ Q+ RLDGSTK + R +D FNAP SE F F+
Sbjct: 697 ATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFM 756
Query: 567 LSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEED 626
LSTRAGGLG+NL TADTVIIFDSDWNP D+QA RAHRIGQ+ V ++R +T+ SVEE
Sbjct: 757 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEK 816
Query: 627 ILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
IL A+ K+ +D VIQ G + + G E IL E + K + EE ++
Sbjct: 817 ILAAARYKLNVDEKVIQA----GKFDNRST--GAERREIL----ENIIKTENESEEDEE 865
Score = 54 (24.1 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGE 1077
+K S++ + E RLKR K+ + AK+ + + K Q+ L KE+ E
Sbjct: 1266 KKKSREDETEEERRARKEAKRLKRQKEEQEDDAKLQEKLARKAAKKEQK---RLEKEKSE 1322
Query: 1078 MS 1079
S
Sbjct: 1323 SS 1324
Score = 51 (23.0 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 753 RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRK 792
+ + KS+ ++ + S+ +KKK + E E+ K+ K
Sbjct: 1121 KGRKEEKSHKHRSDDDDSSPKKKKHRDSDESSEKKKKKHK 1160
Score = 50 (22.7 bits), Expect = 8.2e-112, Sum P(3) = 8.2e-112
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 1033 NMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVK 1092
NMP KK K K + KD K + E+ KE+ + D ++ E K+ +
Sbjct: 1217 NMPSQETDGSKKDKKEPHK---EKEKD---KEKEKEEDKGKEKEKHKDKDKDKEHKKKSR 1270
Query: 1093 WMEWCEDVMA-DEIRTLQRLQRLQATSDNLPKEKVA 1127
E E+ A E + L+R Q+ + D +EK+A
Sbjct: 1271 EDETEEERRARKEAKRLKR-QKEEQEDDAKLQEKLA 1305
Score = 49 (22.3 bits), Expect = 1.0e-111, Sum P(3) = 1.0e-111
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 1033 NMPISRLKRDKK-GKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEV 1091
N P +LK + K P + K HK + ++ KEE + + E+ ++ K+
Sbjct: 1204 NHPPIKLKLNVKFNMPSQETDGSKKDKKEPHKEKEKDKEKEKEEDKGKEKEKHKDKDKDK 1263
Query: 1092 KWMEWC-EDVMADEIRTLQRLQRLQ 1115
+ + ED +E R + +RL+
Sbjct: 1264 EHKKKSREDETEEERRARKEAKRLK 1288
Score = 47 (21.6 bits), Expect = 8.2e-112, Sum P(3) = 8.2e-112
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 756 RNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVP 798
+ K + + + P+ K KKK E QE K K + P
Sbjct: 1049 KKEKKHRKEDHPKEKEKEKKKEKE-QEKSTDSEKDLKRKIEAP 1090
Score = 46 (21.3 bits), Expect = 1.7e-107, Sum P(2) = 1.7e-107
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 747 EDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGA 806
E+ A + A+ K E E + + K ++ Q+R+ K K+E S +V
Sbjct: 1276 EERRARKEAKRLKRQKEEQEDDAKLQEKLARKAAKKEQKRLEKE-KSESSTGTVNLSAAG 1334
Query: 807 SA 808
SA
Sbjct: 1335 SA 1336
Score = 45 (20.9 bits), Expect = 1.3e-111, Sum P(3) = 1.3e-111
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 762 AEANEPERSNKRKKKGSELQEPQERVHKRRK 792
+E++ + S K++KK + P+E+ +++K
Sbjct: 1039 SESDSDDNSLKKEKKHRKEDHPKEKEKEKKK 1069
Score = 40 (19.1 bits), Expect = 9.2e-111, Sum P(3) = 9.2e-111
Identities = 18/99 (18%), Positives = 37/99 (37%)
Query: 990 PNLKERANALLEMELXXXXXXXXXXXXXRKASKKGREKSENILNMPISRLKRDK-KGKPG 1048
P +K + N M K +K +EK + +DK K K
Sbjct: 1206 PPIKLKLNVKFNMPSQETDGSKKDKKEPHKEKEKDKEKEKEEDKGKEKEKHKDKDKDKEH 1265
Query: 1049 SAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQ 1087
K T++ + ++ + L +++ E D+ ++ E+
Sbjct: 1266 KKKSREDETEEE-RRARKEAKRLKRQKEEQEDDAKLQEK 1303
Score = 39 (18.8 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 16/72 (22%), Positives = 30/72 (41%)
Query: 723 NFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQE 782
N E DGS + K + +D + K + + ++ + KKK E +
Sbjct: 1217 NMPSQETDGSKKDK--KEPHKEKEKDKEKEKEEDKGKEKEKHKDKDKDKEHKKKSREDET 1274
Query: 783 PQERVHKRRKAE 794
+ER R++A+
Sbjct: 1275 EEER-RARKEAK 1285
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 1099 (391.9 bits), Expect = 4.5e-112, Sum P(2) = 4.5e-112
Identities = 263/680 (38%), Positives = 404/680 (59%)
Query: 32 SFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIE-LNDVSKEMDLDIIKQNSQVERI 90
SF++ ++ KK ++ + + F ++EE + L ++K+ L +K N + +
Sbjct: 635 SFSDRSSIKAVKKSDRLSRFMTKINNFHNQTAKEEQKKLEKMAKQR-LQALKSNDEEAYL 693
Query: 91 -IADRISKDSSGNVTQEYLVKW-KGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQG 148
+ D +KD+ E ++ L+ A + +K+ AQD + Y R A
Sbjct: 694 KLLDH-TKDTRITHLLEQTNQFLDSLALAVQSQQKE-----AQDNL-AYSGRAIEPASVE 746
Query: 149 KMVDLQRKK------GKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILAD 202
+ D +R+K ++ +QP L GG L++YQL+GL ++V+ + N N ILAD
Sbjct: 747 PLDDEKREKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILAD 806
Query: 203 EMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRA 262
EMGLGKT+Q++S+L +L ++IPGPFLV+VPLST++NW EF KW P++ I Y GT
Sbjct: 807 EMGLGKTIQTISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPN 866
Query: 263 SREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEA 322
R+V Q +D + G F +LTT+E V+KDK +L +IKW ++++DE HR+KN+ +
Sbjct: 867 QRKVMQ-----HDIRTGN---FQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANS 918
Query: 323 QLYTTLSE-FSTKNKLLITGTPLQNSVEELWALLHFLDHDKF---KSKDDFIQN-YKNLS 377
+L TL++ + + +L++TGTPLQN++ ELWALL+F+ F KS D++ + N
Sbjct: 919 KLSETLTQNYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTG 978
Query: 378 SFNENELAN---------LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
++ EL LH LRP +LRR+ KDVEK LP K+E++++ + S LQ + Y+
Sbjct: 979 GQDKIELTEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQ 1038
Query: 429 WILERNFHDLNKGVRGN-QVSLLNI---VVELKKCCNHPFLFESADHGYGGDTSINDTSK 484
+L N G+ V++ N +++LKK CNHPF++E ++ + ND +
Sbjct: 1039 QMLRYNMLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETND--Q 1096
Query: 485 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK 544
+ R+ +GK +LDK+L + T H+VLIF QM ++++I+ +++ ++G ++ RLDG TK
Sbjct: 1097 IWRV---AGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTK 1153
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
A+ R + FNAP S+ FCFLLSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAH
Sbjct: 1154 ADDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAH 1213
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE--L 662
RIGQ+ V I R +T SVEE ILERA KK+ +D VIQ G + K + E L
Sbjct: 1214 RIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQA----GKFDNKSTAEEQEAML 1269
Query: 663 SAILRFGAEELFKEDRNDEE 682
A++ E K ++EE
Sbjct: 1270 RALIEKEDERRQKGGTDEEE 1289
Score = 42 (19.8 bits), Expect = 4.5e-112, Sum P(2) = 4.5e-112
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 661 ELSAILRFGAEELFK-EDRNDEE 682
EL I + EELFK ED EE
Sbjct: 1336 ELPEIYKIDPEELFKKEDVASEE 1358
Score = 37 (18.1 bits), Expect = 1.5e-111, Sum P(2) = 1.5e-111
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 1098 EDVMADEIRTLQRLQRLQATSDNLPKEK 1125
EDV ++E R +++ DNL +E+
Sbjct: 1352 EDVASEEYGRGARERKILQYDDNLTEEQ 1379
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 1099 (391.9 bits), Expect = 4.5e-112, Sum P(2) = 4.5e-112
Identities = 263/680 (38%), Positives = 404/680 (59%)
Query: 32 SFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIE-LNDVSKEMDLDIIKQNSQVERI 90
SF++ ++ KK ++ + + F ++EE + L ++K+ L +K N + +
Sbjct: 635 SFSDRSSIKAVKKSDRLSRFMTKINNFHNQTAKEEQKKLEKMAKQR-LQALKSNDEEAYL 693
Query: 91 -IADRISKDSSGNVTQEYLVKW-KGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQG 148
+ D +KD+ E ++ L+ A + +K+ AQD + Y R A
Sbjct: 694 KLLDH-TKDTRITHLLEQTNQFLDSLALAVQSQQKE-----AQDNL-AYSGRAIEPASVE 746
Query: 149 KMVDLQRKK------GKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILAD 202
+ D +R+K ++ +QP L GG L++YQL+GL ++V+ + N N ILAD
Sbjct: 747 PLDDEKREKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILAD 806
Query: 203 EMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRA 262
EMGLGKT+Q++S+L +L ++IPGPFLV+VPLST++NW EF KW P++ I Y GT
Sbjct: 807 EMGLGKTIQTISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPN 866
Query: 263 SREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEA 322
R+V Q +D + G F +LTT+E V+KDK +L +IKW ++++DE HR+KN+ +
Sbjct: 867 QRKVMQ-----HDIRTGN---FQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANS 918
Query: 323 QLYTTLSE-FSTKNKLLITGTPLQNSVEELWALLHFLDHDKF---KSKDDFIQN-YKNLS 377
+L TL++ + + +L++TGTPLQN++ ELWALL+F+ F KS D++ + N
Sbjct: 919 KLSETLTQNYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTG 978
Query: 378 SFNENELAN---------LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
++ EL LH LRP +LRR+ KDVEK LP K+E++++ + S LQ + Y+
Sbjct: 979 GQDKIELTEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQ 1038
Query: 429 WILERNFHDLNKGVRGN-QVSLLNI---VVELKKCCNHPFLFESADHGYGGDTSINDTSK 484
+L N G+ V++ N +++LKK CNHPF++E ++ + ND +
Sbjct: 1039 QMLRYNMLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETND--Q 1096
Query: 485 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK 544
+ R+ +GK +LDK+L + T H+VLIF QM ++++I+ +++ ++G ++ RLDG TK
Sbjct: 1097 IWRV---AGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTK 1153
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
A+ R + FNAP S+ FCFLLSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAH
Sbjct: 1154 ADDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAH 1213
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNE--L 662
RIGQ+ V I R +T SVEE ILERA KK+ +D VIQ G + K + E L
Sbjct: 1214 RIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQA----GKFDNKSTAEEQEAML 1269
Query: 663 SAILRFGAEELFKEDRNDEE 682
A++ E K ++EE
Sbjct: 1270 RALIEKEDERRQKGGTDEEE 1289
Score = 42 (19.8 bits), Expect = 4.5e-112, Sum P(2) = 4.5e-112
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 661 ELSAILRFGAEELFK-EDRNDEE 682
EL I + EELFK ED EE
Sbjct: 1336 ELPEIYKIDPEELFKKEDVASEE 1358
Score = 37 (18.1 bits), Expect = 1.5e-111, Sum P(2) = 1.5e-111
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 1098 EDVMADEIRTLQRLQRLQATSDNLPKEK 1125
EDV ++E R +++ DNL +E+
Sbjct: 1352 EDVASEEYGRGARERKILQYDDNLTEEQ 1379
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
Identities = 254/633 (40%), Positives = 386/633 (60%)
Query: 83 QNSQVERIIADRIS--KDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAI--DEYK 138
+ ++ER R++ K + + L + K + + + +D +A+ + +
Sbjct: 366 EQKRIERTAKQRLAALKSNDEEAYLKLLDQTKDTRITQLLRQTNSFLDSLSEAVRAQQNE 425
Query: 139 AREAAMAEQGKMVDLQRKKG---KASLR---KLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
A+ E + D +R+K + + R K+D+QP L GG L++YQL GL ++V+ +
Sbjct: 426 AKILHGEEVQPITDEEREKTDYYEVAHRIKEKIDKQPSILVGGTLKEYQLRGLEWMVSLY 485
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+QS+S++ +L ++ GPFLV+VPLST++NW EF KW P++
Sbjct: 486 NNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSL 545
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
N I+Y GT R Q + +VG F+ LLTTYE ++KDK++LSK W ++++D
Sbjct: 546 NTIIYKGTPNQRHSLQ-----HQIRVGN---FDVLLTTYEYIIKDKSLLSKHDWAHMIID 597
Query: 313 EAHRLKNSEAQLYTTLSEF-STKNKLLITGTPLQNSVEELWALLHFLDHDKFKS----KD 367
E HR+KN++++L T+S + T+N+L++TGTPLQN++ ELWALL+F+ F S +D
Sbjct: 598 EGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFED 657
Query: 368 DFIQNYKNLSSFNENELAN---------LHMELRPHILRRIIKDVEKSLPPKIERILRVE 418
F + N + + EL LH LRP +LRR+ K+VEK LP K+E++++ +
Sbjct: 658 WFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCK 717
Query: 419 MSPLQKQYYKWILERNFHDLNKGV----RGNQVSLLNIVVELKKCCNHPFLFESADHGYG 474
+S LQ+Q Y+ +L+ N + G +G L N +++L+K CNHPF+F+ + G
Sbjct: 718 LSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEVE-GVV 776
Query: 475 GDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGF 534
+ S ++ L R+ +GK +LD++L + + HRVL+F QM +++DI+ +++ K
Sbjct: 777 -NPSRGNSDLLFRV---AGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDL 832
Query: 535 QFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQ 594
++ RLDGSTK E R + ++ FNAP S+ FCFLLSTRAGGLG+NL TADTVIIFD+DWNP
Sbjct: 833 KYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 892
Query: 595 NDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRK 654
DLQA RAHRIGQ+ V I R +T+ SVEE ILERA +K+ +D VIQ G + K
Sbjct: 893 QDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQA----GKFDNK 948
Query: 655 KQRKGNELSAILRFGAEELFKEDRNDEESKKRL 687
+ E A LR E E D++ K L
Sbjct: 949 STAEEQE--AFLRRLIES---ETNRDDDDKAEL 976
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 1050 (374.7 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
Identities = 230/576 (39%), Positives = 360/576 (62%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ +Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ +
Sbjct: 143 SVGDYRHRRTEQEEDEELLSESRKTSNVCVR-FEVSPSYVKGGPLRDYQIRGLNWLISLY 201
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++
Sbjct: 202 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSL 261
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
VI +VG + +R F D+ + P +++ +T+YE+V+K+K+V K W YL++D
Sbjct: 262 RVICFVGDKDARAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVID 314
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L + +F + N+LL+TGTPLQN++ ELWALL+FL D F S +DF
Sbjct: 315 EAHRIKNEKSKLSEIVRDFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSW 374
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q+++Y IL
Sbjct: 375 FDTKNCLGDQKLVERLHTVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKIL 434
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHG--YGGDTSI-NDTSK---L 485
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G Y D I +++ K L
Sbjct: 435 MKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVL 494
Query: 486 ERIILS---SGKLVILDKLLVRLHETKHRVLIFS--QMVRMLDILAEYMS----YKGFQ- 535
++++ G V++ + RL + ++ + R LD + K F+
Sbjct: 495 DKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCR-LDGQTPHEEREEILKDFKI 553
Query: 536 -FQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQ 594
F GS ++A++ FN P S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ
Sbjct: 554 IFHEYQGS------NEAIEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 607
Query: 595 NDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRK 654
DLQAM RAHRIGQ++ V ++R +T +VEE I+ERA+ K+ LD +VIQ+ K
Sbjct: 608 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 667
Query: 655 KQRKGNELSAILRFGAEELF--KEDRNDEESKKRLL 688
++ E+ ++R GA +F KE +E LL
Sbjct: 668 MAKE--EMLQMIRHGATHVFASKESELTDEDITTLL 701
Score = 73 (30.8 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 789 KRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG 848
+++K + + P P ++ + N +KRD +F +A K+G + I IAR+ G
Sbjct: 839 EQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYG-RDDIDNIAREVEG 897
Query: 849 AVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLL 908
+P+EV+ E + + C E ++ K ++ ++ R+ + L
Sbjct: 898 K---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ-----RRISIKKAL 944
Query: 909 AKRISRYEDPIKQFRV 924
+I+RY+ P Q R+
Sbjct: 945 DAKIARYKAPFHQLRI 960
Score = 64 (27.6 bits), Expect = 9.0e-111, Sum P(2) = 9.0e-111
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 937 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 990
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 991 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 1030
Score = 37 (18.1 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 759 KSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPS 799
K E E ER+ K+K+ + P + +RKAE + S
Sbjct: 1033 KENMEIEERERAEKKKRA---TKTPMSQ---KRKAESATES 1067
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 1045 (372.9 bits), Expect = 5.5e-108, Sum P(3) = 5.5e-108
Identities = 224/519 (43%), Positives = 336/519 (64%)
Query: 141 EAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVIL 200
EA ++E+ K +D + + + + EQP+ GG L+DYQL+GL ++++ + N+ N IL
Sbjct: 835 EAPISEEDKNLDYFKVAHR--IHEEVEQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGIL 892
Query: 201 ADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGT 260
ADEMGLGKT+Q+++ + +L + GPFL++VPLSTL+NW EF KW P++ I Y G
Sbjct: 893 ADEMGLGKTIQTIAFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGP 952
Query: 261 RASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNS 320
R+ Q ++ R FN LLTT+E ++KD+ +LS+IKW ++++DE HR+KN+
Sbjct: 953 PQLRKTLQS-------QI-RSSNFNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNT 1004
Query: 321 EAQLYTTLSEF-STKNKLLITGTPLQNSVEELWALLHFL---DHDKFKSKDDFIQN-YKN 375
+++L +TLS + ++ +L++TGTPLQN++ ELWALL+F+ + KS D++ + N
Sbjct: 1005 QSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFAN 1064
Query: 376 LSS-----FNENE----LANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQY 426
NE E + LH LRP + RR+ KDVEK LP K+E++++ +S LQ +
Sbjct: 1065 TGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKL 1124
Query: 427 YKWILERN--FHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSK 484
Y+ + + F D KG G + L N V++LKK CNHPF+FE + D S +
Sbjct: 1125 YQQMKKHGMLFVDGEKGKTGIK-GLQNTVMQLKKICNHPFIFEDVERAI--DPSGTNVDL 1181
Query: 485 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK 544
L R ++GK +LD++L +L T H+ L+F QM +++ I+ +Y+ K +++ RLDGSTK
Sbjct: 1182 LWR---AAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTK 1238
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
++ R + FN P S+ + F+LSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAH
Sbjct: 1239 SDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAH 1298
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
RIGQ + V I R +T KS+EE+IL RA+ K+ LD VIQ
Sbjct: 1299 RIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQ 1337
Score = 44 (20.5 bits), Expect = 5.5e-108, Sum P(3) = 5.5e-108
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 1284 RRRAETDMYSQAQPMLQRPMNNGTRLPD 1311
+ RA TD+Y + +P L+R + LPD
Sbjct: 1397 KERAATDIYGKGKP-LERLLTVN-ELPD 1422
Score = 38 (18.4 bits), Expect = 5.5e-108, Sum P(3) = 5.5e-108
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 896 NDLINRVEELQLLAKRISR 914
N+LI+R +E +L K++ +
Sbjct: 1379 NELISRTDEELVLFKKLDK 1397
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 1030 (367.6 bits), Expect = 6.5e-106, Sum P(2) = 6.5e-106
Identities = 245/649 (37%), Positives = 373/649 (57%)
Query: 157 KGKASLRKLDEQP--EW-LRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSV 213
+G+A ++ EQ +W L G LR YQLEG+N+L + IL DEMGLGKT Q++
Sbjct: 23 EGRAEAARVQEQDLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTI 82
Query: 214 SMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFY 273
++ +L GPFL++ PLS LSNW +E +++ P ++ + Y G + R QQ
Sbjct: 83 ALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQ---- 138
Query: 274 NDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFST 333
D K + +F+ LLTTYE+ LKD + L W+ L+VDEAHRLKN + L+ TLSEFS
Sbjct: 139 -DLK--QESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSV 195
Query: 334 KNKLLITGTPLQNSVEELWALLHFLDHDKFKSKD--DFIQNYKNLSSFNENELANLHMEL 391
LL+TGTP+QNS++EL++LL F++ D F ++ DFIQ Y+++ +E+ + LH L
Sbjct: 196 VFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESA-SELHKLL 254
Query: 392 RPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLN 451
+P +LRR+ +V LP K E ++ MS LQK+YYK IL ++ D + +V L N
Sbjct: 255 QPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMKDL-DAFENETAKKVKLQN 313
Query: 452 IVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHR 511
I+ +L+KC +HP+LF+ + + D + +SGKL +LDKLL L+ HR
Sbjct: 314 ILSQLRKCVDHPYLFDGVEPE---PFEVGD-----HLTEASGKLHLLDKLLAFLYSGGHR 365
Query: 512 VLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSED-FCFLLSTR 570
VL+FSQM +MLDIL +YM Y+G+ ++R+DGS + E RH A+ +F G + F FLLSTR
Sbjct: 366 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF---GQQPIFVFLLSTR 422
Query: 571 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 630
AGG+G+NL ADTVI DSD+NPQNDLQA +RAHRIGQ + V + R + +VEE + +
Sbjct: 423 AGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRK 482
Query: 631 AKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRN--DEESKKRLL 688
A K+ L +++I+ + ++ +LS IL+FG ++L + + DE + +L
Sbjct: 483 AASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESIL 542
Query: 689 GMDIDXXXXXXXXXXXXXXXXXXXXXXXSA--FKVANFCG--AEDDGSFWSRWIKPEAVA 744
G D F+ ++ +++D + + + +
Sbjct: 543 GETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTL 602
Query: 745 QAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKA 793
+ + R+ RN S E S KRK+ S +E ++R KR++A
Sbjct: 603 LEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSP-EELEDRQKKRQEA 650
Score = 38 (18.4 bits), Expect = 6.5e-106, Sum P(2) = 6.5e-106
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
L P + PE R+KK E + R+ + +K +
Sbjct: 620 LIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQ 664
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 1009 (360.2 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 225/550 (40%), Positives = 337/550 (61%)
Query: 148 GKMVDLQRK-KGKASLRKLDEQP--EW-LRGGKLRDYQLEGLNFLVNSWRNDTNVILADE 203
G ++ LQ K + +A ++ EQ +W L G LR YQL+G+N+L + IL DE
Sbjct: 15 GFLLALQSKSRAEAPRARVQEQDLRQWGLTGIHLRPYQLQGVNWLAQCFHCQNGCILGDE 74
Query: 204 MGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRAS 263
MGLGKT Q++++ +L GPFL++ PLS LSNW +E ++ P ++ + Y G +
Sbjct: 75 MGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDK 134
Query: 264 REVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQ 323
R QQ D K + +F+ LLTTYE+ LKD + L W+ L+VDEAHRLKN +
Sbjct: 135 RACLQQ-----DLK--QESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSL 187
Query: 324 LYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSK--DDFIQNYKNLSSFNE 381
L+ TLSEFS LL+TGTP+QNS++EL++LL F++ D F + +DF+Q Y+++ +E
Sbjct: 188 LHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESE 247
Query: 382 NELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKG 441
+ + L+ L+P +LRR+ +V LP K E ++ MS LQK+YYK IL ++ D +
Sbjct: 248 SA-SELYKLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDL-DAFEN 305
Query: 442 VRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKL 501
+V L N++ +L+KC +HP+LF+ + I D +I +SGKL +LDKL
Sbjct: 306 EMAKKVKLQNVLSQLRKCVDHPYLFDGVEPE---PFEIGD-----HLIEASGKLHLLDKL 357
Query: 502 LVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSE 561
L L+ HRVL+FSQM +MLDIL +Y+ Y+G+ ++R+DGS + E RH A+ +F G +
Sbjct: 358 LAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNF---GQQ 414
Query: 562 DFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSK 621
LSTRAGG+G+NL ADTVI FDSD+NPQNDLQA +RAHRIGQ + V + R +
Sbjct: 415 PIFTFLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRD 474
Query: 622 SVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRND- 680
+VEE + +A K+ L + +I+ + ++ +LS IL+FG ++L + +
Sbjct: 475 TVEEIVYRKAASKLQLTNTIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLSSEGSTM 534
Query: 681 -EESKKRLLG 689
E K +LG
Sbjct: 535 HEIDLKSILG 544
Score = 50 (22.7 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 18/84 (21%), Positives = 37/84 (44%)
Query: 1018 RKASKKGREKSENILNMPIS---------RLKRDKKGKPGSAKVNFQTTKDRFHKPQRVE 1068
++ SK+ RE E ++N+ + RL R+K P V T + R P+ +E
Sbjct: 583 KEPSKEDRESFEQLVNLQKTLLEKTSQEGRLLRNKGSVPIPGLVEGSTKRKRILSPEELE 642
Query: 1069 QPLTKEEGEMSDNEEVYEQFKEVK 1092
+ + + + + E+ ++ K
Sbjct: 643 DRRKRRQEAAAKRKRLLEEKRKKK 666
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 1002 (357.8 bits), Expect = 1.0e-104, Sum P(3) = 1.0e-104
Identities = 218/504 (43%), Positives = 316/504 (62%)
Query: 159 KASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGF 218
K S + EQP+ + GGKL++YQ+ GL +L++ + + N ILADEMGLGKTVQ+++ + F
Sbjct: 606 KKSNNLVIEQPDLMTGGKLKEYQVTGLEWLISLYTRNLNGILADEMGLGKTVQTIAFISF 665
Query: 219 LQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKV 278
L + PFLVV PLST+SNW EF +W P ++VIVY G + R + +
Sbjct: 666 LYERMNVREPFLVVAPLSTISNWVSEFARWSPKLHVIVYKGKQDERRETA-------RTI 718
Query: 279 GRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLL 338
R F ++T++E ++KD+ L ++ W Y+++DE HR+KN ++L L ++ ++N+LL
Sbjct: 719 PRNA-FCVVITSFEYIIKDRKTLGRVHWIYIIIDEGHRIKNKNSKLSVQLRQYHSRNRLL 777
Query: 339 ITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNY---------KNLSSFNENE---LAN 386
+TGTPLQN + ELWALL+FL F S D F QN+ KNL + NE E + N
Sbjct: 778 LTGTPLQNDLGELWALLNFLLPTIFNSADTF-QNWFNAPFQAKGKNLINVNEEESLIIIN 836
Query: 387 -LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLN---KGV 442
LH LR +LRR+ DVE LP K E++++ MS LQ Y+ ++E ++ K
Sbjct: 837 RLHQVLRFFLLRRLKSDVESQLPDKKEKVIKCNMSALQIAMYRSLVEYGVLPIDPDSKEG 896
Query: 443 RGNQVSLL---NIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILD 499
R ++ + NIV +L+K CNHP+LF+ + IN E +I +SGK +D
Sbjct: 897 RSGRLKMKGFNNIVKQLQKICNHPYLFKD-------EWDIN-----EDLIRTSGKFDTMD 944
Query: 500 KLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPG 559
++L ++H +KHRVLIF+QM +++++ EY S K + F RLDGSTK E R + +N P
Sbjct: 945 QILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHLVVEWNRPD 1004
Query: 560 SEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVT 619
S + F+LST AGGLG+NL TADTVIIFDSDWNPQ DLQA R HRIGQ V+++R ++
Sbjct: 1005 SPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSVSVFRLIS 1064
Query: 620 SKSVEEDILERAKKKMVLDHLVIQ 643
+ S+EE IL RA K+ +D +IQ
Sbjct: 1065 ANSIEEKILGRATDKLEIDAKIIQ 1088
Score = 47 (21.6 bits), Expect = 1.0e-104, Sum P(3) = 1.0e-104
Identities = 18/98 (18%), Positives = 40/98 (40%)
Query: 1201 SNLSGEKLHQIYSKLK--QERQEEAGIGPSHINGSASGSIDNDLNFSTFNRHAERQKGHK 1258
S GEK + K + + + ++ ++ S D+D N + N + + +
Sbjct: 1241 SKKDGEKSKKKKGKSRGRKNKSDDEDSSDDELDDEGISSDDDDNNINNNNNNNDNNNKNN 1300
Query: 1259 NVSTYQMTEPIHKGIDPKKFEAWKRRRRAETDMYSQAQ 1296
N + + T I K I ++ A ++R+ + + Q
Sbjct: 1301 NNNDDEETGAIQKQIVERR-RATPQQRKQQRQQQQEKQ 1337
Score = 46 (21.3 bits), Expect = 1.0e-104, Sum P(3) = 1.0e-104
Identities = 10/53 (18%), Positives = 28/53 (52%)
Query: 55 DVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEY 107
DVR R + ++++L ++ +++ D+ + ++++ I +S G +Y
Sbjct: 350 DVRIRSEIESKQLKLLELQRKLRNDVSLEME--DQVLIRSIQNNSKGYDDNDY 400
Score = 39 (18.8 bits), Expect = 5.7e-104, Sum P(3) = 5.7e-104
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 136 EYKAREAAMAEQGKMVDLQRK-KGKASLRKLDE 167
+ + R ++Q K+++LQRK + SL D+
Sbjct: 350 DVRIRSEIESKQLKLLELQRKLRNDVSLEMEDQ 382
Score = 37 (18.1 bits), Expect = 1.2e-103, Sum P(3) = 1.2e-103
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 1231 NG--SASGSIDNDLNFSTFNRHAERQKGHKNVSTYQMTEPIHKG 1272
NG ++S + +ND N S N + ++Q+ N + P KG
Sbjct: 1360 NGIENSSNNNNNDDNNSNGNSNQQQQQQQSNNG--ETPTPAKKG 1401
>UNIPROTKB|F6XTU7 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
Length = 1075
Score = 983 (351.1 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 222/575 (38%), Positives = 343/575 (59%)
Query: 136 EYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRND 195
+Y+ R E +++ RK +R + P +++GG LRDYQ+ GLN+L++ + N
Sbjct: 143 DYRHRRTEQEEDEELLSESRKTSNVCVR-FEVSPSYVKGGPLRDYQIRGLNWLISLYENG 201
Query: 196 TNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVI 255
N ILADEMGLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++ VI
Sbjct: 202 VNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVI 261
Query: 256 VYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAH 315
+VG + +R F D+ + P +++ +T+YE+V+K+K+V K W YL++DEAH
Sbjct: 262 CFVGDKDARAA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAH 314
Query: 316 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKN 375
R+KN +++L + EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF +
Sbjct: 315 RIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT 374
Query: 376 LSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYY---KWIL 431
+ + +L LH L+P +LRRI DVEKSLPPK E + + +S +Q++++ + +
Sbjct: 375 KNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWFVILAFFI 434
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELK--KCCNHPFLFESADHGYGGDTSINDTSKLERII 489
N ++ NK +++ +LN+++ L+ KCC F + IN K+
Sbjct: 435 SENSNNSNKN---HKLDILNVIMLLREAKCCGASFCLQKKKQNVA---YIN---KVHINY 485
Query: 490 LSSGKLVILDKLLVRLHETKHRVLIFSQMVR------MLDILAEYMSYKGFQ---FQRLD 540
S G + +LD + + + R L + L I ++ Y Q F +
Sbjct: 486 CSKGIISMLDYCKTEIEQHRCRCLCILNPLNTFFENGFLQIHIKHKPYSAIQNDPFPWNE 545
Query: 541 GSTKAEL-----RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQN 595
TK + +A++ FNAP S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ
Sbjct: 546 DDTKYLFVYIIYKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQV 605
Query: 596 DLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKK 655
DLQAM RAHRIGQ++ V ++R +T +VEE I+ERA+ K+ LD +VIQ+ K
Sbjct: 606 DLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 665
Query: 656 QRKGNELSAILRFGAEELF--KEDRNDEESKKRLL 688
++ E+ ++R GA +F KE +E LL
Sbjct: 666 AKE--EMLQMIRHGATHVFASKESELTDEDITTLL 698
Score = 73 (30.8 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 789 KRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG 848
+++K + + P P ++ + N +KRD +F +A K+G + I IAR+ G
Sbjct: 836 EQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYG-RDDIDNIAREVEG 894
Query: 849 AVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLL 908
+P+EV+ E + + C E ++ K ++ ++ R+ + L
Sbjct: 895 K---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ-----RRISIKKAL 941
Query: 909 AKRISRYEDPIKQFRV 924
+I+RY+ P Q R+
Sbjct: 942 DAKIARYKAPFHQLRI 957
Score = 64 (27.6 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 934 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 987
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 988 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 1027
Score = 37 (18.1 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 759 KSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPS 799
K E E ER+ K+K+ + P + +RKAE + S
Sbjct: 1030 KENMEIEERERAEKKKRA---TKTPMSQ---KRKAESATES 1064
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 1003 (358.1 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
Identities = 228/551 (41%), Positives = 335/551 (60%)
Query: 150 MVDLQ-RKKGKASLRKLDEQP--EW-LRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMG 205
++ LQ + + +A ++ EQ W L G LR YQLEG+N+L + IL DEMG
Sbjct: 17 LLALQSQSRTEAERARVQEQDLRRWGLTGIHLRPYQLEGVNWLAQCFHYQNGCILGDEMG 76
Query: 206 LGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASRE 265
LGKT Q++++ +L GPFL++ PLS LSNW +E + P + + Y G + R
Sbjct: 77 LGKTCQTIAVFIYLAGRLNDEGPFLILCPLSVLSNWKEEMERCAPGLCCVTYAGDKEERA 136
Query: 266 VCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLY 325
QQ D K + F+ LLTTYE+ LKD + L W+ L+VDEAHRLKN + L+
Sbjct: 137 HLQQ-----DLK--QESGFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQNSLLH 189
Query: 326 TTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKD--DFIQNYKNLSSFNENE 383
+LSEFS +LL+TGTP+QNS++EL++LL F++ D F ++ DF+Q Y+++ +E+
Sbjct: 190 KSLSEFSVAFRLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVEDFVQRYEDIEKESESA 249
Query: 384 LANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFH--DLNKG 441
+ L+ L+P +LRR+ +V LP K E ++ MS LQK+YYK IL ++ D +
Sbjct: 250 -SELYKLLQPFLLRRVKAEVAAELPKKTEVVIYHGMSALQKKYYKAILMKDLEISDAFEN 308
Query: 442 VRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKL 501
+V L N++ +L+KC +HP+LF+ + I D +I +SGKL +LDKL
Sbjct: 309 EMAKKVKLQNVLSQLRKCVDHPYLFDGVEPE---PFEIGD-----HLIEASGKLHLLDKL 360
Query: 502 LVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSE 561
L L+ HRVL+FSQM +MLDIL +YM Y+G+ ++R+DGS + E RH A+ +F G +
Sbjct: 361 LAFLYSKGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF---GQQ 417
Query: 562 D-FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTS 620
F FLLSTRAGG+G+NL ADTVI DSD+NPQNDLQA +RAHRIGQ + V + R +
Sbjct: 418 PIFIFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 477
Query: 621 KSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRN- 679
+VEE I +A K+ L + +I+ +R +LS IL+FG ++L + +
Sbjct: 478 DTVEEIICRKAASKLKLTNTIIEGGRFTLGAQRPAAEADLQLSEILKFGLDKLLSSEGST 537
Query: 680 -DEESKKRLLG 689
DE + +LG
Sbjct: 538 MDEIDLESILG 548
Score = 45 (20.9 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
Identities = 19/84 (22%), Positives = 38/84 (45%)
Query: 1018 RKASKKGREKSENILNMPISRL-KRDKKGK----PGSAK----VNFQTTKDRFHKPQRVE 1068
++ SK+ R+ E ++N+ + L K ++G+ GS V T + R P+ +E
Sbjct: 587 KEPSKEDRKSFEQLVNLQKTLLEKTGQEGRLLRNKGSVLIPGLVEGSTQRKRILSPEELE 646
Query: 1069 QPLTKEEGEMSDNEEVYEQFKEVK 1092
K + + + + E+ K K
Sbjct: 647 DRRKKRQEAAAKRKRLIEEKKRKK 670
Score = 43 (20.2 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 767 PERSNKRKKKGSELQEPQERV--HKRRKAE 794
PE R+KK E ++R+ K+RK E
Sbjct: 642 PEELEDRRKKRQEAAAKRKRLIEEKKRKKE 671
>ASPGD|ASPL0000048785 [details] [associations]
symbol:AN1956 species:162425 "Emericella nidulans"
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
Length = 1443
Score = 1027 (366.6 bits), Expect = 1.6e-103, P = 1.6e-103
Identities = 255/706 (36%), Positives = 399/706 (56%)
Query: 13 EMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDV 72
+ E+LIKWK +S+ HC W + + V+ A + +M + E I ND
Sbjct: 437 DKEYLIKWKEKSYAHCTWMPGSWVWGY--INPVMRRAFLRSDKSHLPRMTTDEAIP-NDY 493
Query: 73 SK-EMDLDIIKQNSQVERIIADRISKDSS--GNVTQEYLVKWKGLSYAEATWEKDEIIDF 129
+ ++ D+ ++ + + + +D NV++ Y VK+KGL Y +A WE D
Sbjct: 494 LRFDIIFDVKFADNDLH-MYGEDYDEDLERIDNVSKAY-VKFKGLPYEDAVWEVPP--DR 549
Query: 130 AQ-DAIDEYKAREAAMAEQG-----KMVDLQRKKG---KASLRKLDEQPEWLRGGKLRDY 180
+ +A +++KA A A++ + LQ+ K + + QP + GG++ DY
Sbjct: 550 SNTEAWNDFKAAYADWAKKPFISTPNQISLQKHLANVRKQKFKSREAQPRIMTGGEIMDY 609
Query: 181 QLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSN 240
Q +GLN+L W N ILADEMGLGKT+Q + +L L + PFL+VVP ST N
Sbjct: 610 QRDGLNWLYFKWFKQQNAILADEMGLGKTIQVIGLLATLVQDHKC-WPFLIVVPNSTCPN 668
Query: 241 WAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRP-IKFNTLLTTYEVVLKD-- 297
W KE + W+P++ + Y G+ +R++ Q++E + G P ++ + ++T+YE ++ D
Sbjct: 669 WRKELKTWVPSLRAVTYYGSSLARKMAQEHEMFIR---GDPDLRCHVVITSYETMVDDSC 725
Query: 298 KAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHF 357
+ VLS+I W L+VDE RLK+ ++Q+Y LS+ K+L+TGTPLQN+ +EL+ LL F
Sbjct: 726 RKVLSRIPWAGLIVDEGQRLKSDKSQIYEGLSKMKFPFKVLMTGTPLQNNTKELFNLLQF 785
Query: 358 LDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRV 417
D K + ++ + Y LS EN + LH +RP LRR V LPP ++ I+ V
Sbjct: 786 CDQSK--NAEELEEKYGTLSK--EN-IPELHELIRPFFLRRTKAQVLTFLPPVVQIIVPV 840
Query: 418 EMSPLQKQYYKWILERNFHDLNKGVRGNQV----------SLLNIVVELKKCCNHPFLFE 467
MS LQK+ YK IL +N + + N+ +L NI+++L+KC HPF+F
Sbjct: 841 TMSVLQKKLYKSILAKNTQLIKAIFQRNEEDQPLKQTERHNLNNILMQLRKCLCHPFIFS 900
Query: 468 SADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAE 527
A D + + ++ ++GKL +L+ +L +L HRVL+FSQ + LD++ +
Sbjct: 901 KAIEERTDDPEVAHRNLVD----AAGKLQLLELMLPKLQARGHRVLVFSQFLENLDVMED 956
Query: 528 YMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIF 587
++ G +RLDG + + + +D +NA S F FLLSTR+GG+GINLATADTVII
Sbjct: 957 FLDGLGLPHRRLDGRMTSLEKQRMIDDYNAENSPYFAFLLSTRSGGVGINLATADTVIIM 1016
Query: 588 DSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA 647
D D+NP D+QA+SRAHRIGQ+ V +++ + S EE I++ +KKMVLDH++I ++ A
Sbjct: 1017 DPDFNPHQDMQALSRAHRIGQKNKVLVFQLMIRGSAEEKIMQIGRKKMVLDHVLIDRMAA 1076
Query: 648 EGSWRRKKQRKGNELSAILRFGAEELFKEDRNDE-----ESKKRLL 688
E G +L +ILR GA+ LF +D + + ES RLL
Sbjct: 1077 EDD-------DGEDLESILRHGAKALFDDDNSGDIIYTSESVDRLL 1115
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 989 (353.2 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 223/551 (40%), Positives = 339/551 (61%)
Query: 148 GKMVDLQ-RKKGKASLRKLDEQP--EW-LRGGKLRDYQLEGLNFLVNSWRNDTNVILADE 203
G ++ +Q R +G+A+ +++EQ +W L G +LR YQLEG+N+L + IL DE
Sbjct: 15 GFLLAVQSRSRGEAARTRVEEQDLQQWGLTGIRLRSYQLEGVNWLARCFHCQNGCILGDE 74
Query: 204 MGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRAS 263
MGLGKT Q++++ +L GPFL++ PLS LSNW +E ++ P ++ ++Y G +
Sbjct: 75 MGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWTEEMERFAPGLSCVMYAGDKEE 134
Query: 264 REVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQ 323
R QQ D K + +F+ LLTTYE+ LKD + L W+ L+VDEAHRLKN +
Sbjct: 135 RARLQQ-----DLK--QESRFHVLLTTYEICLKDSSFLKSFPWSVLVVDEAHRLKNQNSL 187
Query: 324 LYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKD--DFIQNYKNLSSFNE 381
L+ TL EFS LL+TGTP+QNS++EL++LL F++ D F + DF+Q Y+++ ++
Sbjct: 188 LHKTLLEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFPKEQVGDFVQRYQDIEKESD 247
Query: 382 NELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKG 441
+ + LH L+P +LRR+ +V LP K E +L MS LQK+YYK IL ++ D +
Sbjct: 248 SA-SELHKLLQPFLLRRVKAEVATELPKKTEVVLYHGMSALQKKYYKAILMKDL-DAFES 305
Query: 442 VRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKL 501
+V L N++ +L+KC +HP+LFE + T + T+ L+ + L++ + L +
Sbjct: 306 EMAKKVKLQNVLSQLRKCVDHPYLFEGETVPFFL-TLLFMTTPLKNLELAALSFLFLAR- 363
Query: 502 LVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSE 561
HRVL+FSQM +MLDIL +YM Y+G+ ++R+DGS + E RH A+ +F G +
Sbjct: 364 -------GHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF---GQQ 413
Query: 562 D-FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTS 620
F FLLSTRAGG+G+NL ADTVI DSD+NPQNDLQA +RAHRIGQ + V + R +
Sbjct: 414 PVFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 473
Query: 621 KSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRN- 679
+VEE + +A K+ L + +I+ + ++ +LS IL+FG ++L +
Sbjct: 474 DTVEEIVYRKAASKLQLTNAIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLSSQGST 533
Query: 680 -DEESKKRLLG 689
DE +R+LG
Sbjct: 534 MDEIDLERILG 544
Score = 45 (20.9 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 748 DALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERV--HKRRKAE 794
+ L P + + PE R+KK E ++R+ K+RK E
Sbjct: 619 NVLLPGLSEESTKRKRILSPEELEDRRKKRQEAAAKRKRLMEEKKRKKE 667
>POMBASE|SPBP35G2.10 [details] [associations]
symbol:mit1 "SHREC complex subunit Mit1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
NextBio:20802445 Uniprot:Q9P793
Length = 1418
Score = 990 (353.6 bits), Expect = 4.4e-101, Sum P(2) = 4.4e-101
Identities = 249/702 (35%), Positives = 387/702 (55%)
Query: 1 MSHLFDSEPD---WNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVR 57
+S+ F S D W+ E+ ++ KG+S+LHC W S + L +S KK N+ +E+
Sbjct: 378 LSNNFVSTSDLSFWSR-EYFVRSKGKSYLHCFWCSASWLAGISLAKKK-NFDG--LENAS 433
Query: 58 FRKMVSREEIELNDVSKEMDLDIIK-QNSQVERIIADRISKDSSGNVTQEYLVKWKGLSY 116
+ + + K D+ +N++ + + + VT + V W+GL+Y
Sbjct: 434 YDATKPIIPVSYTIIDKVWDVQYRSGKNARTAKYKTKKHQLKAISEVTFAF-VSWRGLTY 492
Query: 117 AEATWE---KDEIIDFAQDAIDEYK-AREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWL 172
+ WE K+ + + + Y E E+ + +L + QP ++
Sbjct: 493 YMSNWEPPPKETDRNRWKAWLKGYSDLLECLWIEKAPTASINIDLPFTNL-EWHSQPSFI 551
Query: 173 RGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVV 232
+GG L YQL+GLN+L W ILADEMGLGKTVQ +S + L + P LV+
Sbjct: 552 KGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYRHKC-FPVLVI 610
Query: 233 VPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYE 292
VP +T++NW +E +KW P + + V VG+ +R + + Y N K + + + L+ +
Sbjct: 611 VPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDP-KHVSTHVLVISAS 669
Query: 293 VVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELW 352
V ++ ++L K +W L+VDE RLKN ++ L+ LS + KLL+TGTPLQN+V EL+
Sbjct: 670 NVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNVRELF 729
Query: 353 ALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIE 412
LL FL+ K + + ++ K S + ++ LH L+P LRR+ +V + P K+E
Sbjct: 730 NLLQFLNPMKINAAE--LE--KRYSIIDTEKVTELHQILKPFFLRRVKSEVLDNFPTKVE 785
Query: 413 RILRVEMSPLQKQYYKWILERNFHDL-------NKGVRGNQ--VSLLNIVVELKKCCNHP 463
I+ + M+P+QK YK IL +N L N G Q SL NI+++L+K HP
Sbjct: 786 VIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANTSSSGGQRTTSLNNILMQLRKTLAHP 845
Query: 464 FLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLD 523
+++ S D D ++ + + +S K +IL L+ +L HR+L+FSQ ++ LD
Sbjct: 846 YIY-SPDIE---DRNLPYELAMRSLEEASCKFLILRLLVPKLITRGHRILLFSQFIQQLD 901
Query: 524 ILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADT 583
IL ++ YK + R DG++ R A+D FNAP SE CFLLSTRAGG+GINLA+ADT
Sbjct: 902 ILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGVGINLASADT 961
Query: 584 VIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
VII D D+NP D+QA++RAHR GQ++ V ++ T SVEE I++ A+KK+VLDHL+++
Sbjct: 962 VIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQNAQKKLVLDHLIVE 1021
Query: 644 KLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKK 685
L+ + +L +ILR GA LF E+ DE S K
Sbjct: 1022 SLD-------QNHNSEKDLESILRHGARALF-EEAGDEPSIK 1055
Score = 39 (18.8 bits), Expect = 4.4e-101, Sum P(2) = 4.4e-101
Identities = 10/39 (25%), Positives = 24/39 (61%)
Query: 1141 SRIKHLTSLLFFHFIQVLSKIRNYLQLIGRRIDQIVLEH 1179
S ++ + +F+ +++ K N+ QL+GR + + VL++
Sbjct: 1263 SEMQLIDDPVFYPPYEIIEK--NH-QLVGRSLSKAVLDN 1298
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 932 (333.1 bits), Expect = 3.0e-100, Sum P(2) = 3.0e-100
Identities = 218/544 (40%), Positives = 321/544 (59%)
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 343
++ +T+YE+++K+K+V K W YL++DEAHR+KN +++L + EF T N+LL+TGTP
Sbjct: 1 WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTP 60
Query: 344 LQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELAN-LHMELRPHILRRIIKD 402
LQN++ ELW+LL+FL D F S DDF + + + +L LHM LRP +LRRI D
Sbjct: 61 LQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDKKLVERLHMVLRPFLLRRIKAD 120
Query: 403 VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNH 462
VEKSLPPK E + V +S +Q+++Y IL ++ LN + +++ LLNI+++L+KCCNH
Sbjct: 121 VEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNH 180
Query: 463 PFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRML 522
P+LF+ A+ G T ++ ++ +SGK+V+LDKLL +L E RVLIFSQM R+L
Sbjct: 181 PYLFDGAEPGPPYTTDMH-------LVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVL 233
Query: 523 DILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATAD 582
DIL +Y ++ +++ RLDG T + R +++ +N P S F F+LSTRAGGLGINLATAD
Sbjct: 234 DILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATAD 293
Query: 583 TVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 642
VI++DSDWNPQ DLQAM RAHRIGQ + V ++RF+T +VEE I+ERA+ K+ LD +VI
Sbjct: 294 VVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVI 353
Query: 643 QKLNAEGSWRRKKQRKGNELSAILRFGAEELF--KEDRNDEESKKRLLGMDIDXXXXXXX 700
Q+ K + +E+ ++R GA +F KE +E +L
Sbjct: 354 QQGRLVDQNLNKIGK--DEMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNE 411
Query: 701 XXXXXXXXXXXXXXXXSAFKVANFCGA---EDDGSFWSRWIKP---EAVAQ-AEDALAPR 753
+ V NF G E ++ WI+P E A A DA
Sbjct: 412 KLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKIAFTEWIEPPKRERKANYAADAYFRE 471
Query: 754 AAR--NTKSYAEANEPERSNKRK-----KKGSELQEPQERVHKRRKAEFSVPSVPFI-DG 805
A R K+ P++ N + + EL E +E ++ R+ + VP P + +
Sbjct: 472 ALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLE-KEILYYRKTIGYKVPRSPDLPNA 530
Query: 806 ASAQ 809
A AQ
Sbjct: 531 AQAQ 534
Score = 86 (35.3 bits), Expect = 3.0e-100, Sum P(2) = 3.0e-100
Identities = 40/152 (26%), Positives = 71/152 (46%)
Query: 815 YGNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVE 874
+ N +KRD +F +A K+G ++ I IAR+ G P+EV+ E + + C E +
Sbjct: 563 FTNWNKRDFNQFIKANEKWG-RNDIENIAREVEGKT---PEEVI-EYSAVFWERCNELQD 617
Query: 875 VGSPDPKGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWS 934
+ K ++ ++ R+ + L +I RY+ P Q R+ SY +
Sbjct: 618 I----EKIMAQIERGEARIQ-----RRISIKKALDTKIGRYKAPFHQLRI-SY----GTN 663
Query: 935 KGCGWNQFDDARLLLGIHYHGFGNWENIRLDE 966
KG + + ++ L+ +H GF EN+ DE
Sbjct: 664 KGKNYTEEENRFLICMLHKLGFDK-ENV-YDE 693
Score = 37 (18.1 bits), Expect = 4.4e-95, Sum P(2) = 4.4e-95
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 986 LPRAPNLKERANALLEMEL 1004
+PR+P+L A A E +L
Sbjct: 521 VPRSPDLPNAAQAQKEEQL 539
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 987 (352.5 bits), Expect = 7.6e-100, Sum P(4) = 7.6e-100
Identities = 252/628 (40%), Positives = 358/628 (57%)
Query: 37 QNLSGFKKVLNYAKKVVEDVRFRKM--VSREEIEL---NDVSKEMDLDIIKQNSQVERII 91
+ L GF + K E + K+ + RE+I L NDV E L ++ Q+++ +R+
Sbjct: 610 ERLKGFNRYAKEFHKRKERLHREKIDKIQREKINLLKINDV--EGYLRMV-QDAKSDRV- 665
Query: 92 ADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREAA-MAEQGK- 149
++ K++ Q+ K K + +E + +A D+ E ++Q K
Sbjct: 666 -KQLLKETE-KYLQKLGSKLKEAKLLTSRFENEADETRTSNATDDETLIENEDESDQAKH 723
Query: 150 MVDLQRK---KGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGL 206
++ K + ++EQP L GGKLR+YQ+ GL +LV+ + N N ILADEMGL
Sbjct: 724 YLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGL 783
Query: 207 GKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREV 266
GKTVQ +S++ +L + GPFLVVVP S L W E W P+++ IVY GT R
Sbjct: 784 GKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERR- 842
Query: 267 CQQYEFYNDKKVGRPIKFNTLLTTYEVVLK--DKAVLSKIKWNYLMVDEAHRLKNSEAQL 324
+ + ++ V + KFN LLTTYE ++ D+ LSKI W+Y+++DE HR+KN+ +L
Sbjct: 843 ----KLFKEQIVHQ--KFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKL 896
Query: 325 YTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKN--------- 375
L + + ++LL+TGTPLQN++EELWALL+FL + F S +DF Q +
Sbjct: 897 NADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESS 956
Query: 376 ----LSSFNENELA--NLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW 429
L S EN L LH LRP +LRR+ VE LP KIER++R E S QK
Sbjct: 957 AEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQK----- 1011
Query: 430 ILERNFHDLNKGVRGNQVS--LLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLER 487
+L + D N G GN S + N V+EL+ CNHP+L S H + I L
Sbjct: 1012 LLMKRVED-NLGSIGNAKSRAVHNSVMELRNICNHPYL--SQLHSEEVNNII-PKHFLPP 1067
Query: 488 IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAEL 547
I+ GKL +LD++L +L T HRVL FS M R+LD++ +Y++ KG+++ RLDG T
Sbjct: 1068 IVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGD 1127
Query: 548 RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 607
R +D FN GS F FLLS RAGG+G+NL ADTVI+FD+DWNPQ DLQA +RAHRIG
Sbjct: 1128 RGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIG 1187
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKM 635
Q++ V + RF T SVEE + A+ K+
Sbjct: 1188 QKKDVLVLRFETVNSVEEQVRASAEHKL 1215
Score = 40 (19.1 bits), Expect = 7.6e-100, Sum P(4) = 7.6e-100
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 777 GSELQEPQERVHKRRKAEFSVPSVPFIDGASAQ 809
GS +Q + + F+V P I G S+Q
Sbjct: 1635 GSHVQTLNVLENSSERKAFAVKKRPLIQGVSSQ 1667
Score = 39 (18.8 bits), Expect = 7.6e-98, Sum P(2) = 7.6e-98
Identities = 24/106 (22%), Positives = 45/106 (42%)
Query: 1225 IGPSHINGSASGSIDNDLNFSTFNRHAERQKGHKNVSTYQMTEPIHKGIDPKKFEAWKRR 1284
+ P H SA+ ++ +D ++ + G + S Q + + K F A K+R
Sbjct: 1606 VSPVH---SATTALRSD---KAADKDLDAPPGFDSGSHVQTLNVLENSSERKAF-AVKKR 1658
Query: 1285 RRAETDMYSQAQPMLQRPMNNGTRLPDPNSLGILGAAPTDNRRFVT 1330
+ + SQ ++P++ LP S +LG P N+ V+
Sbjct: 1659 PLIQ-GVSSQHPGPNKQPLD----LPVSTSSTLLGGGPVQNQNAVS 1699
Score = 38 (18.4 bits), Expect = 7.6e-100, Sum P(4) = 7.6e-100
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 1259 NVSTYQMTEPIHKGIDPK 1276
NVS Q P+ GIDP+
Sbjct: 2561 NVSQDQTDIPLVGGIDPE 2578
Score = 38 (18.4 bits), Expect = 7.6e-100, Sum P(4) = 7.6e-100
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 924 VLSYLKPSNWSKGCGWNQFDDARLLLG 950
V ++ +P + + DDA+LL+G
Sbjct: 2434 VSNFDRPKDGTADTHMEDIDDAKLLVG 2460
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 224/564 (39%), Positives = 338/564 (59%)
Query: 146 EQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMG 205
E G+ ++ + + ++ +E L GG+L+ YQL+G+ +L++ W+N N ILAD+MG
Sbjct: 171 EDGETINSDLTEEETVIKLQNELCPLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMG 230
Query: 206 LGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASRE 265
LGKT+Q++ L L+ + GP+LV+ PLSTLSNW E ++ P++N I+Y G + R+
Sbjct: 231 LGKTIQTIGFLSHLKG-NGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRD 289
Query: 266 VCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKD-KAVLSKIKWNYLMVDEAHRLKNSEAQL 324
++ K VG P KF ++T+YEV + D K +L W Y+++DE HRLKN + +L
Sbjct: 290 ELRRKHM--PKTVG-P-KFPIVITSYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKL 345
Query: 325 YTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL------DHDKFKSKDDFIQNYKNLSS 378
L NKLL+TGTPLQN++ ELW+LL+F+ HD+F+S DF + KN ++
Sbjct: 346 LRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEAT 405
Query: 379 FNENE------LANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILE 432
E E ++ LH LRP ILRR+ DVE SLP K E I+ M+ QK++ + ++
Sbjct: 406 KEEEEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVN 465
Query: 433 RNF--HDLNKGVRGN--QVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERI 488
H +RG + L N+V++L+K CNHP L + G + + +E I
Sbjct: 466 NTLEAHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQGQIDG----SYLYPP--VEEI 519
Query: 489 ILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELR 548
+ GK +L++LLVRL H+VLIFSQ ++LDI+ Y S KGF+ R+DGS K + R
Sbjct: 520 VGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDER 579
Query: 549 HQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQ 608
+ + F+ S FLLSTRAGGLGINL ADT I++DSDWNPQ DLQAM R HRIGQ
Sbjct: 580 RRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQ 639
Query: 609 QEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRF 668
+ V++YR T++S+E +L+RA K+ L+H+VI +G + +++ + L
Sbjct: 640 TKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVI----GQGQFHQERAKSSTPLEE---- 691
Query: 669 GAEELFKEDRNDEESKKRLLGMDI 692
E++ + DE ++ +L+ DI
Sbjct: 692 --EDILALLKEDETAEDKLIQTDI 713
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 636 (228.9 bits), Expect = 1.8e-97, Sum P(2) = 1.8e-97
Identities = 162/486 (33%), Positives = 273/486 (56%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFK--KVLNYAKKVVEDVRFRKMVSREEIELNDV 72
E L+ WK + + + AE + L K + + AK+ + F ++++ E+ + +
Sbjct: 347 EMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNF--LITQTELYAHFM 404
Query: 73 SKEMDLDIIKQNSQVERIIADRISK---DSSG----NVTQE-Y---LVKWKGLSYAEATW 121
S++ D+ ++ R + D ++ D G N+TQE Y K + L AE +
Sbjct: 405 SRKRDIGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNYYKAQALKNAEDAY 464
Query: 122 E--KDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE-WLRGGKLR 178
+ + F +DA + A A + G S+R ++ P+ + GKL+
Sbjct: 465 QIHQARTRSFDEDAKESRAAALRAANKSGTGFGESYSLANPSIRAGEDIPQPTIFNGKLK 524
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
YQL+G+N+L N + N ILADEMGLGKTVQS+++L L + I GPFL++ P STL
Sbjct: 525 GYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTL 584
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKV-GRPIKFNTLLTTYEVVLKD 297
+NW +EF +++P V+ Y G R+V ++ F++ K + + F+ ++T+Y++V++D
Sbjct: 585 NNWHQEFARFVPKFKVLPYWGNPHDRKVIRK--FWSQKTLYTQDAPFHVVITSYQLVVQD 642
Query: 298 KAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHF 357
++KW Y+++DEA LK+S + + L +F +N+LL+TGTP+QN++ ELWALLHF
Sbjct: 643 VKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHF 702
Query: 358 LDHDKFKSKDDF-------IQNY-KNLSSFNENELANLHMELRPHILRRIIKDVEKSLPP 409
+ F S ++F I+++ +N S+ +EN+L+ LHM L+P +LRRI KDVE L
Sbjct: 703 IMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSD 762
Query: 410 KIERILRVEMSPLQKQYYKWILER-NFHDLNKGVRGN--QV-----SLLNIVVELKKCCN 461
KIE ++ + + QK Y+ + + + DL + G Q SL+N+V++ +K CN
Sbjct: 763 KIEILMYCQQTSRQKLLYQALKNKISIDDLLQSSMGTTQQAQTTTSSLMNLVMQFRKVCN 822
Query: 462 HPFLFE 467
HP LFE
Sbjct: 823 HPELFE 828
Score = 427 (155.4 bits), Expect = 1.8e-97, Sum P(2) = 1.8e-97
Identities = 98/202 (48%), Positives = 130/202 (64%)
Query: 486 ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK- 544
E +I SGKL LD LL RL HRVLI+SQM RM+D+L EYM Y+ + RLDGS+K
Sbjct: 1102 ESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1161
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
+E R D N ++ F FLLSTRAGGLGINL ADTVI +DSDWNP D QAM RAH
Sbjct: 1162 SERRDMVADFQNR--NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAH 1219
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSA 664
R+GQ + V +YR + ++EE IL+RAK+K + +VI + G+++ K E+ +
Sbjct: 1220 RLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVI----SGGNFK-PDTLKPKEVVS 1274
Query: 665 ILRFGAEELFKEDRNDEESKKR 686
+L EEL K+ R +E K++
Sbjct: 1275 LL-LDDEELEKKLRQRQEEKRQ 1295
Score = 56 (24.8 bits), Expect = 2.4e-58, Sum P(2) = 2.4e-58
Identities = 18/82 (21%), Positives = 38/82 (46%)
Query: 731 GSFWSRWIKPEAVAQA---EDALAPRAARNTKSYAEANEPERSNKRKKKG---SELQEPQ 784
G+F +KP+ V ++ L + + + + E R +RK+K +E ++ +
Sbjct: 1260 GNFKPDTLKPKEVVSLLLDDEELEKKLRQRQEEKRQQEETNRVKERKRKREKYAEKKKKE 1319
Query: 785 ERVHKRRKAEFSVPSVPFIDGA 806
+ + +RK E +PF+ A
Sbjct: 1320 DELDGKRKKEGMNLVIPFVPSA 1341
Score = 44 (20.5 bits), Expect = 4.3e-57, Sum P(2) = 4.3e-57
Identities = 19/87 (21%), Positives = 42/87 (48%)
Query: 609 QEVVNIYRFVTSK-SVEEDILE-RAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAIL 666
+E I R V S + + D L+ + ++LD ++K + +++Q + N +
Sbjct: 1247 KEKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDEELEKKLRQRQEEKRQQEETNRVKERK 1306
Query: 667 RFGAEELFKEDRNDE-ESKKRLLGMDI 692
R + K+ + DE + K++ GM++
Sbjct: 1307 RKREKYAEKKKKEDELDGKRKKEGMNL 1333
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 636 (228.9 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 162/486 (33%), Positives = 274/486 (56%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFK--KVLNYAKKVVEDVRFRKMVSREEIELNDV 72
E L+ WK + + + AE + L K + + AK+ + F ++++ E+ + +
Sbjct: 342 EMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNF--LITQTELYAHFM 399
Query: 73 SKEMDLDIIKQNSQVERIIADRISK---DSSG----NVTQE-Y---LVKWKGLSYAEATW 121
S++ D+ ++ R + D ++ D G N+TQE Y K + L AE +
Sbjct: 400 SRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENAY 459
Query: 122 E--KDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE-WLRGGKLR 178
+ F +DA + A A + G S+R ++ P+ + GKL+
Sbjct: 460 HIHQARTRSFDEDAKESRAAALRAANKSGTGFGESYSLANPSIRAGEDIPQPTIFNGKLK 519
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
YQL+G+N+L N + N ILADEMGLGKTVQS+++L L + I GPFL++ P STL
Sbjct: 520 GYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTL 579
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKV-GRPIKFNTLLTTYEVVLKD 297
+NW +EF +++P V+ Y G R+V ++ F++ K + + F+ ++T+Y++V++D
Sbjct: 580 NNWHQEFTRFVPKFKVLPYWGNPHDRKVIRR--FWSQKTLYTQDAPFHVVITSYQLVVQD 637
Query: 298 KAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHF 357
++KW Y+++DEA LK+S + + L +F +N+LL+TGTP+QN++ ELWALLHF
Sbjct: 638 VKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHF 697
Query: 358 LDHDKFKSKDDF-------IQNY-KNLSSFNENELANLHMELRPHILRRIIKDVEKSLPP 409
+ F S ++F I+++ +N S+ +EN+L+ LHM L+P +LRRI KDVE L
Sbjct: 698 IMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSD 757
Query: 410 KIERILRVEMSPLQKQYYKWILER-NFHDLNKGVRGN--QV-----SLLNIVVELKKCCN 461
KIE ++ +++ QK Y+ + + + DL + G+ Q SL+N+V++ +K CN
Sbjct: 758 KIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVCN 817
Query: 462 HPFLFE 467
HP LFE
Sbjct: 818 HPELFE 823
Score = 426 (155.0 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 98/202 (48%), Positives = 130/202 (64%)
Query: 486 ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK- 544
E +I SGKL LD LL RL HRVLI+SQM RM+D+L EYM Y+ + RLDGS+K
Sbjct: 1094 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1153
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
+E R D N ++ F FLLSTRAGGLGINL ADTVI +DSDWNP D QAM RAH
Sbjct: 1154 SERRDMVADFQNR--NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAH 1211
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSA 664
R+GQ + V +YR + ++EE IL+RAK+K + +VI + G+++ K E+ +
Sbjct: 1212 RLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVI----SGGNFK-PDTLKPKEVVS 1266
Query: 665 ILRFGAEELFKEDRNDEESKKR 686
+L EEL K+ R +E K++
Sbjct: 1267 LL-LDDEELEKKLRLRQEEKRQ 1287
Score = 56 (24.8 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 731 GSFWSRWIKPEAVAQA--EDALAPRAAR----NTKSYAEANE-PERSNKRKKKGSELQEP 783
G+F +KP+ V +D + R + E N ER KR+K + ++
Sbjct: 1252 GNFKPDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKE 1311
Query: 784 QERVHKRRK--AEFSVPSVPFIDGAS 807
E KRRK +P VP D ++
Sbjct: 1312 DELDGKRRKEGVNLVIPFVPSADNSN 1337
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 636 (228.9 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 162/486 (33%), Positives = 274/486 (56%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFK--KVLNYAKKVVEDVRFRKMVSREEIELNDV 72
E L+ WK + + + AE + L K + + AK+ + F ++++ E+ + +
Sbjct: 345 EMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNF--LITQTELYAHFM 402
Query: 73 SKEMDLDIIKQNSQVERIIADRISK---DSSG----NVTQE-Y---LVKWKGLSYAEATW 121
S++ D+ ++ R + D ++ D G N+TQE Y K + L AE +
Sbjct: 403 SRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENAY 462
Query: 122 E--KDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE-WLRGGKLR 178
+ F +DA + A A + G S+R ++ P+ + GKL+
Sbjct: 463 HIHQARTRSFDEDAKESRAAALRAANKSGTGFGESYSLANPSIRAGEDIPQPTIFNGKLK 522
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
YQL+G+N+L N + N ILADEMGLGKTVQS+++L L + I GPFL++ P STL
Sbjct: 523 GYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTL 582
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKV-GRPIKFNTLLTTYEVVLKD 297
+NW +EF +++P V+ Y G R+V ++ F++ K + + F+ ++T+Y++V++D
Sbjct: 583 NNWHQEFTRFVPKFKVLPYWGNPHDRKVIRR--FWSQKTLYTQDAPFHVVITSYQLVVQD 640
Query: 298 KAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHF 357
++KW Y+++DEA LK+S + + L +F +N+LL+TGTP+QN++ ELWALLHF
Sbjct: 641 VKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHF 700
Query: 358 LDHDKFKSKDDF-------IQNY-KNLSSFNENELANLHMELRPHILRRIIKDVEKSLPP 409
+ F S ++F I+++ +N S+ +EN+L+ LHM L+P +LRRI KDVE L
Sbjct: 701 IMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSD 760
Query: 410 KIERILRVEMSPLQKQYYKWILER-NFHDLNKGVRGN--QV-----SLLNIVVELKKCCN 461
KIE ++ +++ QK Y+ + + + DL + G+ Q SL+N+V++ +K CN
Sbjct: 761 KIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLVMQFRKVCN 820
Query: 462 HPFLFE 467
HP LFE
Sbjct: 821 HPELFE 826
Score = 426 (155.0 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 98/202 (48%), Positives = 130/202 (64%)
Query: 486 ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK- 544
E +I SGKL LD LL RL HRVLI+SQM RM+D+L EYM Y+ + RLDGS+K
Sbjct: 1098 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1157
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
+E R D N ++ F FLLSTRAGGLGINL ADTVI +DSDWNP D QAM RAH
Sbjct: 1158 SERRDMVADFQNR--NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAH 1215
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSA 664
R+GQ + V +YR + ++EE IL+RAK+K + +VI + G+++ K E+ +
Sbjct: 1216 RLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVI----SGGNFK-PDTLKPKEVVS 1270
Query: 665 ILRFGAEELFKEDRNDEESKKR 686
+L EEL K+ R +E K++
Sbjct: 1271 LL-LDDEELEKKLRLRQEEKRQ 1291
Score = 56 (24.8 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 731 GSFWSRWIKPEAVAQA--EDALAPRAAR----NTKSYAEANE-PERSNKRKKKGSELQEP 783
G+F +KP+ V +D + R + E N ER KR+K + ++
Sbjct: 1256 GNFKPDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKE 1315
Query: 784 QERVHKRRK--AEFSVPSVPFIDGAS 807
E KRRK +P VP D ++
Sbjct: 1316 DELDGKRRKEGVNLVIPFVPSADNSN 1341
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 634 (228.2 bits), Expect = 3.9e-97, Sum P(2) = 3.9e-97
Identities = 162/486 (33%), Positives = 273/486 (56%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFK--KVLNYAKKVVEDVRFRKMVSREEIELNDV 72
E L+ WK + + + AE + L K + + AK+ + F ++++ E+ + +
Sbjct: 351 EMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNF--LITQTELYAHFM 408
Query: 73 SKEMDLDIIKQNSQVERIIADRISK---DSSG----NVTQE-Y---LVKWKGLSYAEATW 121
S++ D+ ++ R + D + D G N+TQE Y K + L AE +
Sbjct: 409 SRKRDMGHDGIQEEILRKLEDSSMQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENAY 468
Query: 122 E--KDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE-WLRGGKLR 178
+ F +DA + A A + G S+R ++ P+ + GKL+
Sbjct: 469 HIHQARTRSFDEDAKESRAAALRAANKSGTGFGESYSLANPSIRAGEDIPQPTIFNGKLK 528
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
YQL+G+N+L N + N ILADEMGLGKTVQS+++L L + I GPFL++ P STL
Sbjct: 529 GYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTL 588
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKV-GRPIKFNTLLTTYEVVLKD 297
+NW +EF +++P V+ Y G R+V ++ F++ K + + F+ ++T+Y++V++D
Sbjct: 589 NNWHQEFTRFVPKFKVLPYWGNPHDRKVIRR--FWSQKTLYTQDAPFHVVITSYQLVVQD 646
Query: 298 KAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHF 357
++KW Y+++DEA LK+S + + L +F +N+LL+TGTP+QN++ ELWALLHF
Sbjct: 647 VKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHF 706
Query: 358 LDHDKFKSKDDF-------IQNY-KNLSSFNENELANLHMELRPHILRRIIKDVEKSLPP 409
+ F S ++F I+++ +N S+ +EN+L+ LHM L+P +LRRI KDVE L
Sbjct: 707 IMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSD 766
Query: 410 KIERILRVEMSPLQKQYYKWILER-NFHDLNKGVRGN--QV-----SLLNIVVELKKCCN 461
KIE ++ +++ QK Y+ + + + DL + G+ Q SL+N+V++ +K CN
Sbjct: 767 KIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLVMQFRKVCN 826
Query: 462 HPFLFE 467
HP LFE
Sbjct: 827 HPELFE 832
Score = 426 (155.0 bits), Expect = 3.9e-97, Sum P(2) = 3.9e-97
Identities = 98/202 (48%), Positives = 130/202 (64%)
Query: 486 ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK- 544
E +I SGKL LD LL RL HRVLI+SQM RM+D+L EYM Y+ + RLDGS+K
Sbjct: 1104 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1163
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
+E R D N ++ F FLLSTRAGGLGINL ADTVI +DSDWNP D QAM RAH
Sbjct: 1164 SERRDMVADFQNR--NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAH 1221
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSA 664
R+GQ + V +YR + ++EE IL+RAK+K + +VI + G+++ K E+ +
Sbjct: 1222 RLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVI----SGGNFK-PDTLKPKEVVS 1276
Query: 665 ILRFGAEELFKEDRNDEESKKR 686
+L EEL K+ R +E K++
Sbjct: 1277 LL-LDDEELEKKLRLRQEEKRQ 1297
Score = 56 (24.8 bits), Expect = 4.0e-58, Sum P(2) = 4.0e-58
Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 731 GSFWSRWIKPEAVAQA--EDALAPRAAR----NTKSYAEANE-PERSNKRKKKGSELQEP 783
G+F +KP+ V +D + R + E N ER KR+K + ++
Sbjct: 1262 GNFKPDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKE 1321
Query: 784 QERVHKRRKAEFS--VPSVPFIDGAS 807
E KRRK + +P VP D ++
Sbjct: 1322 DELDGKRRKEGINLVIPFVPSADNSN 1347
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 634 (228.2 bits), Expect = 1.1e-96, Sum P(3) = 1.1e-96
Identities = 162/486 (33%), Positives = 273/486 (56%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFK--KVLNYAKKVVEDVRFRKMVSREEIELNDV 72
E L+ WK + + + AE + L K + + AK+ + F ++++ E+ + +
Sbjct: 344 EMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNF--LITQTELYAHFM 401
Query: 73 SKEMDLDIIKQNSQVERIIADRISK---DSSG----NVTQE-Y---LVKWKGLSYAEATW 121
S++ D+ ++ R + D ++ D G N+TQE Y K + L AE +
Sbjct: 402 SRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENAY 461
Query: 122 E--KDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE-WLRGGKLR 178
+ F +DA + A A + G S+R ++ P+ + GKL+
Sbjct: 462 HIHQARTRSFDEDAKESRAAALRAADKSGSGFGESYSLANPSIRAGEDIPQPTIFNGKLK 521
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
YQL+G+N+L N + N ILADEMGLGKTVQS+++L L + I GPFL++ P STL
Sbjct: 522 GYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTL 581
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKV-GRPIKFNTLLTTYEVVLKD 297
+NW +EF +++P V+ Y G R+V ++ F++ K + + F+ ++T+Y++V++D
Sbjct: 582 NNWHQEFTRFVPKFKVLPYWGNPHDRKVIRR--FWSQKTLYTQDAPFHVVITSYQLVVQD 639
Query: 298 KAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHF 357
++KW Y+++DEA LK+S + + L +F +N+LL+TGTP+QN++ ELWALLHF
Sbjct: 640 VKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHF 699
Query: 358 LDHDKFKSKDDF-------IQNY-KNLSSFNENELANLHMELRPHILRRIIKDVEKSLPP 409
+ F S ++F I+++ +N S+ +EN+L+ LHM L+P +LRRI KDVE L
Sbjct: 700 IMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSD 759
Query: 410 KIERILRVEMSPLQKQYYKWILER-NFHDLNKGVRGN--QV-----SLLNIVVELKKCCN 461
KIE + +++ QK Y+ + + + DL + G+ Q SL+N+V++ +K CN
Sbjct: 760 KIEILTYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVCN 819
Query: 462 HPFLFE 467
HP LFE
Sbjct: 820 HPELFE 825
Score = 425 (154.7 bits), Expect = 1.1e-96, Sum P(3) = 1.1e-96
Identities = 96/201 (47%), Positives = 128/201 (63%)
Query: 486 ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKA 545
E +I SGKL LD LL RL HRVLI+SQM RM+D+L EYM Y+ + RLDGS+K
Sbjct: 1097 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1156
Query: 546 ELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR 605
R + F ++ F FLLSTRAGGLGINL ADTVI +DSDWNP D QAM RAHR
Sbjct: 1157 SERRDMVADFQTR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1215
Query: 606 IGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAI 665
+GQ + V +YR + ++EE IL+RAK+K + +VI + G+++ K E+ ++
Sbjct: 1216 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVI----SGGNFK-PDTLKPKEVVSL 1270
Query: 666 LRFGAEELFKEDRNDEESKKR 686
L EEL K+ R +E K++
Sbjct: 1271 L-LDDEELEKKLRLRQEEKRQ 1290
Score = 57 (25.1 bits), Expect = 4.2e-58, Sum P(3) = 4.2e-58
Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 731 GSFWSRWIKPEAVAQA--EDALAPRAAR----NTKSYAEANE-PERSNKRKKKGSELQEP 783
G+F +KP+ V +D + R + E+N ER KR+K + ++
Sbjct: 1255 GNFKPDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEESNRVKERKRKREKYAEKKKKE 1314
Query: 784 QERVHKRRK--AEFSVPSVPFIDGAS 807
E KRRK +P VP D ++
Sbjct: 1315 DELDGKRRKEGVNLVIPFVPSADNSN 1340
Score = 48 (22.0 bits), Expect = 1.1e-96, Sum P(3) = 1.1e-96
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1293 SQAQPMLQRPMNNGTRLPD-PNSLGILGAAPTDN 1325
S A L P+N G +P P SL + + +D+
Sbjct: 1511 SSASSPLSSPLNKGNNIPGTPKSLHMTSSLASDS 1544
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 636 (228.9 bits), Expect = 2.2e-96, Sum P(3) = 2.2e-96
Identities = 162/486 (33%), Positives = 274/486 (56%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFK--KVLNYAKKVVEDVRFRKMVSREEIELNDV 72
E L+ WK + + + AE + L K + + AK+ + F ++++ E+ + +
Sbjct: 351 EMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNF--LITQTELYAHFM 408
Query: 73 SKEMDLDIIKQNSQVERIIADRISK---DSSG----NVTQE-Y---LVKWKGLSYAEATW 121
S++ D+ ++ R + D ++ D G N+TQE Y K + L AE +
Sbjct: 409 SRKRDMGHDGIQEEILRKLEDSSAQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENAY 468
Query: 122 E--KDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE-WLRGGKLR 178
+ F +DA + A A + G S+R ++ P+ + GKL+
Sbjct: 469 HIHQARTRSFDEDAKESRAAALRAANKSGTGFGESYSLANPSIRAGEDIPQPTIFNGKLK 528
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
YQL+G+N+L N + N ILADEMGLGKTVQS+++L L + I GPFL++ P STL
Sbjct: 529 GYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTL 588
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKV-GRPIKFNTLLTTYEVVLKD 297
+NW +EF +++P V+ Y G R+V ++ F++ K + + F+ ++T+Y++V++D
Sbjct: 589 NNWHQEFTRFVPKFKVLPYWGNPHDRKVIRR--FWSQKTLYTQDAPFHVVITSYQLVVQD 646
Query: 298 KAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHF 357
++KW Y+++DEA LK+S + + L +F +N+LL+TGTP+QN++ ELWALLHF
Sbjct: 647 VKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHF 706
Query: 358 LDHDKFKSKDDF-------IQNY-KNLSSFNENELANLHMELRPHILRRIIKDVEKSLPP 409
+ F S ++F I+++ +N S+ +EN+L+ LHM L+P +LRRI KDVE L
Sbjct: 707 IMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSD 766
Query: 410 KIERILRVEMSPLQKQYYKWILER-NFHDLNKGVRGN--QV-----SLLNIVVELKKCCN 461
KIE ++ +++ QK Y+ + + + DL + G+ Q SL+N+V++ +K CN
Sbjct: 767 KIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLVMQFRKVCN 826
Query: 462 HPFLFE 467
HP LFE
Sbjct: 827 HPELFE 832
Score = 425 (154.7 bits), Expect = 2.2e-96, Sum P(3) = 2.2e-96
Identities = 96/201 (47%), Positives = 128/201 (63%)
Query: 486 ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKA 545
E +I SGKL LD LL RL HRVLI+SQM RM+D+L EYM Y+ + RLDGS+K
Sbjct: 1104 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1163
Query: 546 ELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR 605
R + F ++ F FLLSTRAGGLGINL ADTVI +DSDWNP D QAM RAHR
Sbjct: 1164 SERRDMVADFQTR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1222
Query: 606 IGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAI 665
+GQ + V +YR + ++EE IL+RAK+K + +VI + G+++ K E+ ++
Sbjct: 1223 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVI----SGGNFK-PDTLKPKEVVSL 1277
Query: 666 LRFGAEELFKEDRNDEESKKR 686
L EEL K+ R +E K++
Sbjct: 1278 L-LDDEELEKKLRLRQEEKRQ 1297
Score = 56 (24.8 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 731 GSFWSRWIKPEAVAQA--EDALAPRAAR----NTKSYAEANE-PERSNKRKKKGSELQEP 783
G+F +KP+ V +D + R + E N ER KR+K + ++
Sbjct: 1262 GNFKPDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKE 1321
Query: 784 QERVHKRRKAEFS--VPSVPFIDGAS 807
E KRRK + +P VP D ++
Sbjct: 1322 DELDGKRRKEGMNLVIPFVPSADNSN 1347
Score = 43 (20.2 bits), Expect = 2.2e-96, Sum P(3) = 2.2e-96
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 1293 SQAQPMLQRPMNNGTRLPD-PNSLGILGAAPTDN 1325
S A L P+ G LP P SL + + D+
Sbjct: 1518 SSASSPLSSPLGKGNNLPGTPKSLHLTSSLAPDS 1551
Score = 39 (18.8 bits), Expect = 7.4e-33, Sum P(3) = 7.4e-33
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 356 HFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPH 394
H D+D+ + +DD + +LS + + + LH + H
Sbjct: 141 HSEDNDEGEEEDDDEEEELSLSREDLHNMLRLHKYKKLH 179
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 618 (222.6 bits), Expect = 1.0e-94, Sum P(3) = 1.0e-94
Identities = 161/485 (33%), Positives = 269/485 (55%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFK--KVLNYAKKVVEDVRFRKMVSREEIELNDV 72
E L+ WK + + + AE + L K + + AK+ + F ++++ E+ + +
Sbjct: 344 EMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNF--LITQTELYAHFM 401
Query: 73 SKEMDLDIIKQNSQVERIIADRISK---DSSG----NVTQE-Y---LVKWKGLSYAEATW 121
S++ D+ ++ R + D ++ D G N+TQE Y K + L AE +
Sbjct: 402 SRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENAY 461
Query: 122 E--KDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE-WLRGGKLR 178
+ F +DA + A A + G S+R ++ P+ + GKL+
Sbjct: 462 HIHQARTRSFDEDAKESRAAALRAADKSGSGFGESYSLANPSIRAGEDIPQPTIFNGKLK 521
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
YQL+G+N+L N + N ILADEMGLGKTVQS+++L L + I GPFL++ P STL
Sbjct: 522 GYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTL 581
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDK 298
+NW +EF +++P V+ Y G R+ ++ Y P F+ ++T+Y++V++D
Sbjct: 582 NNWHQEFTRFVPKFKVLPYWGNPHDRK--KKKTLYTQDA---P--FHVVITSYQLVVQDV 634
Query: 299 AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFL 358
++KW Y+++DEA LK+S + + L +F +N+LL+TGTP+QN++ ELWALLHF+
Sbjct: 635 KYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFI 694
Query: 359 DHDKFKSKDDF-------IQNY-KNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPK 410
F S ++F I+++ +N S+ +EN+L+ LHM L+P +LRRI KDVE L K
Sbjct: 695 MPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDK 754
Query: 411 IERILRVEMSPLQKQYYKWILER-NFHDLNKGVRGN--QV-----SLLNIVVELKKCCNH 462
IE ++ +++ QK Y+ + + + DL + G+ Q SL+N+V++ +K CNH
Sbjct: 755 IEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVCNH 814
Query: 463 PFLFE 467
P LFE
Sbjct: 815 PELFE 819
Score = 424 (154.3 bits), Expect = 1.0e-94, Sum P(3) = 1.0e-94
Identities = 96/201 (47%), Positives = 128/201 (63%)
Query: 486 ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKA 545
E +I SGKL LD LL RL HRVLI+SQM RM+D+L EYM Y+ + RLDGS+K
Sbjct: 1091 ESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1150
Query: 546 ELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR 605
R + F ++ F FLLSTRAGGLGINL ADTVI +DSDWNP D QAM RAHR
Sbjct: 1151 SERRDMVADFQTR-NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1209
Query: 606 IGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAI 665
+GQ + V +YR + ++EE IL+RAK+K + +VI + G+++ K E+ ++
Sbjct: 1210 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVI----SGGNFK-PDTLKPKEVVSL 1264
Query: 666 LRFGAEELFKEDRNDEESKKR 686
L EEL K+ R +E K++
Sbjct: 1265 L-LDDEELEKKLRLRQEEKRQ 1284
Score = 57 (25.1 bits), Expect = 3.1e-56, Sum P(3) = 3.1e-56
Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 731 GSFWSRWIKPEAVAQA--EDALAPRAAR----NTKSYAEANE-PERSNKRKKKGSELQEP 783
G+F +KP+ V +D + R + E+N ER KR+K + ++
Sbjct: 1249 GNFKPDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQQEESNRVKERKRKREKYAEKKKKE 1308
Query: 784 QERVHKRRK--AEFSVPSVPFIDGAS 807
E KRRK +P VP D ++
Sbjct: 1309 DELDGKRRKEGVNLVIPFVPAADNSN 1334
Score = 47 (21.6 bits), Expect = 1.0e-94, Sum P(3) = 1.0e-94
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1293 SQAQPMLQRPMNNGTRLPD-PNSLGILGAAPTD 1324
S A L P+N G +P P SL + + +D
Sbjct: 1505 SSASSPLSSPLNKGNNIPGTPKSLHMTSSLASD 1537
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 607 (218.7 bits), Expect = 2.3e-94, Sum P(2) = 2.3e-94
Identities = 158/486 (32%), Positives = 271/486 (55%)
Query: 15 EFLIKWKGQSHLHCQWKSFAELQNLSGFK--KVLNYAKKVVEDVRFRKMVSREEIELNDV 72
E L+ WK + + + AE + L K + + AK+ + F ++++ E+ + +
Sbjct: 343 EMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNF--LITQTELYAHFM 400
Query: 73 SKEMDLDIIKQNSQVERIIADRISK---DSSG----NVTQE-Y---LVKWKGLSYAEATW 121
+ + ++ R + D S+ D G NV+QE Y K + L A+ +
Sbjct: 401 GGKQNAGGDCTQEEILRKLEDNSSQRQIDIGGGVMVNVSQEDYDSDYYKSQALKNAKEAY 460
Query: 122 EKDEIID--FAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE-WLRGGKLR 178
+ + F ++A D A A + G S++ ++ P+ + GKL+
Sbjct: 461 QIHQARTRLFDEEAKDSRCASLHAASMSGSGFGESYSLSNPSIQAGEDIPQPTIFNGKLK 520
Query: 179 DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTL 238
YQL+G+N+L N + N ILADEMGLGKTVQS+++L L + I GPFL++ P STL
Sbjct: 521 GYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTL 580
Query: 239 SNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKV-GRPIKFNTLLTTYEVVLKD 297
+NW +EF +++P V+ Y G R+V ++ F++ K + + F+ ++T+Y++V++D
Sbjct: 581 NNWHQEFSRFVPKFKVLPYWGNPHDRKVIRK--FWSQKTLYTQNAPFHVVITSYQLVVQD 638
Query: 298 KAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHF 357
++KW Y+++DEA LK+S + + L +F +N+LL+TGTP+QN++ ELWALLHF
Sbjct: 639 VKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHF 698
Query: 358 LDHDKFKSKDDF-------IQNY-KNLSSFNENELANLHMELRPHILRRIIKDVEKSLPP 409
+ F S ++F I+++ +N S+ +EN+L+ LHM L+P +LRRI KDVE L
Sbjct: 699 IMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSD 758
Query: 410 KIERILRVEMSPLQKQYYKWILER-NFHDLNKGVRGN--QV-----SLLNIVVELKKCCN 461
KIE + +++ Q+ Y+ + + + DL + G+ Q SL+N+V++ +K CN
Sbjct: 759 KIEILTYCQLTSRQRLLYQALKNKISIEDLLQSSMGSAQQAHSTTSSLMNLVMQFRKVCN 818
Query: 462 HPFLFE 467
HP LFE
Sbjct: 819 HPDLFE 824
Score = 428 (155.7 bits), Expect = 2.3e-94, Sum P(2) = 2.3e-94
Identities = 97/202 (48%), Positives = 130/202 (64%)
Query: 486 ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKA 545
E +I SGKL LD LL RL HRVLI+SQM RM+D+L EYM Y+ + RLDGS+K
Sbjct: 1125 ESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1184
Query: 546 ELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR 605
R + F + ++ F FLLSTRAGGLGINL ADTVI +DSDWNP D QAM RAHR
Sbjct: 1185 SERRDMVADFQSR-TDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1243
Query: 606 IGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAI 665
+GQ + V +YR + ++EE IL+RAK+K + +VI + G+++ K E+ ++
Sbjct: 1244 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVI----SGGNFK-PDTLKPKEVVSL 1298
Query: 666 LRFGAEELFKEDRNDEESKKRL 687
L EEL K+ R +E K++L
Sbjct: 1299 L-LDDEELEKKLRLRQEEKRQL 1319
Score = 51 (23.0 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 731 GSFWSRWIKPEAVAQA---EDALAP--RAARNTKSYAEANEPERSNKRKK-KGSELQEPQ 784
G+F +KP+ V ++ L R + K E + + KRK+ K +E + +
Sbjct: 1283 GNFKPDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQLEESSKVKERKRKREKYAERKRKE 1342
Query: 785 ERVHKRRKAE---FSVPSVPFIDGAS 807
+ +RK E +P VP D ++
Sbjct: 1343 DDPESKRKKEGVNMVIPYVPSADNSN 1368
Score = 44 (20.5 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 353 ALLHFLDHDKFKSKDDFIQNY 373
A+LH +DH K K K + +
Sbjct: 849 AILHTIDHGKTKLKQTLLSPF 869
Score = 39 (18.8 bits), Expect = 5.5e-34, Sum P(2) = 5.5e-34
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 372 NYKNLSSFNENELAN-LHMELRPHILRRII 400
N+ +L F E+ + HM L+P I+ + +
Sbjct: 818 NHPDL--FERQEIRSPFHMSLKPFIMSKFL 845
>UNIPROTKB|J9NZH0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
Length = 850
Score = 886 (316.9 bits), Expect = 2.4e-93, Sum P(2) = 2.4e-93
Identities = 192/492 (39%), Positives = 301/492 (61%)
Query: 205 GLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASR 264
GLGKT+Q++++LG+L++ + IPGP +V+VP STL NW EF++W+P++ VI +VG + +R
Sbjct: 3 GLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDAR 62
Query: 265 EVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQL 324
F D+ + P +++ +T+YE+V+K+K+V K W YL++DEAHR+KN +++L
Sbjct: 63 AA-----FIRDEMM--PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 115
Query: 325 YTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENEL 384
+ EF + N+LL+TGTPLQN++ ELWALL+FL D F S DDF + + + +L
Sbjct: 116 SEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKL 175
Query: 385 AN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYY---KWILERNFHDLNK 440
LH L+P +LRRI DVEKSLPPK E + + +S +Q++++ + + N ++ NK
Sbjct: 176 VERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWFVILAFFISENSNNSNK 235
Query: 441 GVRGNQVSLLNIVVELK--KCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVIL 498
+++ +LN+++ L+ KCC F S D + T + I+L K+ +
Sbjct: 236 N---HKLDILNVIMLLREAKCCGASFCLPSLD-------LLPSTLSISHIVLF--KMTLF 283
Query: 499 DKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAP 558
+ + L + L L L +Y + + ++ + G + +A++ FNAP
Sbjct: 284 PGMKMILRQKSRCFLTSDSQFAFLSALPDYEHWPSYFYRSISGQYLFVYKKEAIEAFNAP 343
Query: 559 GSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFV 618
S F F+LSTRAGGLGINLA+AD VI++DSDWNPQ DLQAM RAHRIGQ++ V ++R +
Sbjct: 344 NSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLI 403
Query: 619 TSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELF--KE 676
T +VEE I+ERA+ K+ LD +VIQ+ K ++ E+ ++R GA +F KE
Sbjct: 404 TDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKE--EMLQMIRHGATHVFASKE 461
Query: 677 DRNDEESKKRLL 688
+E LL
Sbjct: 462 SELTDEDITTLL 473
Score = 73 (30.8 bits), Expect = 2.4e-93, Sum P(2) = 2.4e-93
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 789 KRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGG 848
+++K + + P P ++ + N +KRD +F +A K+G + I IAR+ G
Sbjct: 611 EQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYG-RDDIDNIAREVEG 669
Query: 849 AVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKANDLINRVEELQLL 908
+P+EV+ E + + C E ++ K ++ ++ R+ + L
Sbjct: 670 K---SPEEVM-EYSAVFWERCNELQDI----EKIMAQIERGEARIQ-----RRISIKKAL 716
Query: 909 AKRISRYEDPIKQFRV 924
+I+RY+ P Q R+
Sbjct: 717 DAKIARYKAPFHQLRI 732
Score = 64 (27.6 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 901 RVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGFGNWE 960
R+ + L +I+RY+ P Q R+ Y SKG + + +D L+ +H GF E
Sbjct: 709 RISIKKALDAKIARYKAPFHQLRI-QY----GTSKGKNYTEEEDRFLICMLHKMGFDR-E 762
Query: 961 NIRLDERLGLTKKIAPVELQHHETFLPR-APNLKERANALLEM 1002
N+ E L + AP + + R A + R N L+ +
Sbjct: 763 NVY--EELRQCVRNAP-QFRFDWFIKSRTAMEFQRRCNTLISL 802
Score = 37 (18.1 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 759 KSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPS 799
K E E ER+ K+K+ + P + +RKAE + S
Sbjct: 805 KENMEIEERERAEKKKRA---TKTPMSQ---KRKAESATES 839
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 514 (186.0 bits), Expect = 2.4e-93, Sum P(2) = 2.4e-93
Identities = 136/447 (30%), Positives = 241/447 (53%)
Query: 18 IKWKGQSHLHCQWKSFAELQNLSG-FKKVL--NYAKKVVEDVRFRKMVSREEIELNDVSK 74
+ W +S + +++ L S + K L ++ +E+ + ++ + R++ L
Sbjct: 33 MSWDRES-VDIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLERKKESLKVTKD 91
Query: 75 EMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAI 134
+ +D ++N+ +++ R +D S N++ E + K + LS A+ +++E + +
Sbjct: 92 KNSIDASEENAVIKK---KRGREDESYNIS-EVMSKEEILSVAKKNKKENEDESSSSNMC 147
Query: 135 --DEYKAREAAMAEQGKMVDLQRKKGKA---SLRKLD------EQPEWLRGGKLRDYQLE 183
D K +++ + ++ R+ K +RK + +QP+ GG +R YQ+E
Sbjct: 148 VEDLQKNKDSNSKIKDRLSQTVRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVE 207
Query: 184 GLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAK 243
G+ +L W N N ILADEMGLGKTVQ ++ + L + +PGPFLV PLSTL NW
Sbjct: 208 GMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVPGPFLVCGPLSTLPNWMA 266
Query: 244 EFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSK 303
EF+++ P + ++Y GT+ R + ++ +++K I ++T++E+ ++D+ L
Sbjct: 267 EFKRFTPEIPTMLYHGTQQERRILVKH--IHERKGTLQIH-PVVITSFEIAMRDRTTLQN 323
Query: 304 IKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
W YL+VDE HR+KN + +L L F+ NKLL+TGTPLQN++ ELW+LL+FL D F
Sbjct: 324 CYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVF 383
Query: 364 KSKDDFIQNYKNLSSFNE------------NELANLHMELRPHILRRIIKDVEKSLPPKI 411
F +++ +++S +E N L LH L P +LRR+ DV +PPK
Sbjct: 384 DDLKSF-ESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKR 442
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDL 438
E ++ +S Q+ +Y I+ R ++
Sbjct: 443 EVVVYAPLSKKQEIFYTAIVNRTIANM 469
Score = 498 (180.4 bits), Expect = 2.4e-93, Sum P(2) = 2.4e-93
Identities = 117/285 (41%), Positives = 161/285 (56%)
Query: 375 NLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 434
N+ +E E L RP RR K V+ S L +S +Q + + ER
Sbjct: 468 NMFGSSEKETVELSPTGRPK--RRTRKSVDYSKIDDFPNELEKLISQIQPEVDR---ERT 522
Query: 435 FHDLNKGVRGN-QVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSG 493
+ + + + L NI++ L+KCCNHP+L E Y D + E ++ +SG
Sbjct: 523 IVETSVPIESEVNLKLQNIMMLLRKCCNHPYLIE-----YPIDPVTQEFKVDEELVTNSG 577
Query: 494 KLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMD 553
K +ILD++L L H+VL+FSQM RMLDIL +Y ++ F F RLDGS R + +
Sbjct: 578 KFLILDRMLPELKTRGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIH 637
Query: 554 HFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVN 613
FN + F FL+STRAGGLGINL ADTVII+DSDWNPQ+DLQA R HRIGQ V
Sbjct: 638 SFNTD-PDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTRPVV 696
Query: 614 IYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRK 658
+YR VT+ ++++ I+ERA K L+ L+I K + +G Q K
Sbjct: 697 VYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLNQSK 741
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 506 (183.2 bits), Expect = 1.7e-92, Sum P(2) = 1.7e-92
Identities = 139/447 (31%), Positives = 237/447 (53%)
Query: 18 IKWKGQSHLHCQWKSFAELQNLSG-FKKVL--NYAKKVVEDVRFRKMVSREEIELNDVSK 74
+ W +S + +++ L S + K L ++ +E+ + ++ + R++ L
Sbjct: 54 MSWDRES-VDIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLERKKESLKVTKG 112
Query: 75 EMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAI 134
+ +D ++N+ V R R +D S N++ E + K + LS A+ ++ E +
Sbjct: 113 KNSIDASEENTVVMR--KKRGREDESYNIS-EVMSKEEILSVAKKNKKETENESSCSNLC 169
Query: 135 --DEYKAREAAMAEQGKMVDLQRKKGKA---SLRKLD------EQPEWLRGGKLRDYQLE 183
D K R++ + ++ R+ K +RK + +QP+ GG +R YQ+E
Sbjct: 170 VEDLQKNRDSNSIIKDRLSQTVRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVE 229
Query: 184 GLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAK 243
G+ +L W N N ILADEMGLGKTVQ ++ + L + +PGPFLV PLSTL NW
Sbjct: 230 GMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVPGPFLVCGPLSTLPNWMA 288
Query: 244 EFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSK 303
EF+++ P + ++Y G++ R ++ + K+ G ++T++E+ ++D+ VL
Sbjct: 289 EFQRFTPEIPTMLYHGSQQER---RKLVNHIHKRKGTLQIHPVVITSFEIAMRDRNVLQH 345
Query: 304 IKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF 363
W YL+VDE HR+KN + +L L F+ NKLL+TGTPLQN++ ELW+LL+FL D F
Sbjct: 346 CYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVF 405
Query: 364 KSKDDFIQNYKNLSSFNE------------NELANLHMELRPHILRRIIKDVEKSLPPKI 411
F +++ +++S +E N L LH L P +LRR+ DV +PPK
Sbjct: 406 DDLKSF-ESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKR 464
Query: 412 ERILRVEMSPLQKQYYKWILERNFHDL 438
E ++ +S Q+ +Y I+ R ++
Sbjct: 465 EVVVYAPLSKKQEVFYTAIVNRTITNM 491
Score = 500 (181.1 bits), Expect = 1.7e-92, Sum P(2) = 1.7e-92
Identities = 119/285 (41%), Positives = 162/285 (56%)
Query: 375 NLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 434
N+ +E E L RP RR K ++ S L +S +Q + + ER
Sbjct: 490 NMFGSSEKETVELSPTGRPK--RRTRKSIDYSKIDDFPNELEKLISQIQPEVDR---ERA 544
Query: 435 FHDLNKGVRGN-QVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSG 493
+ N V + L NI++ L+KCCNHP+L E Y D + E ++ +SG
Sbjct: 545 VVETNIPVESEVNLKLQNIMMLLRKCCNHPYLIE-----YPIDPVTQEFKIDEELVTNSG 599
Query: 494 KLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMD 553
K +ILD++L L H+VL+FSQM RMLDIL +Y ++ F F RLDGS R + M
Sbjct: 600 KFLILDRMLPELKIRGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYTEREKNMH 659
Query: 554 HFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVN 613
FN + F FL+STRAGGLGINL ADTVII+DSDWNPQ+DLQA R HRIGQ + V
Sbjct: 660 SFNTD-PDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVV 718
Query: 614 IYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRK 658
+YR VT+ ++++ I+ERA K L+ L+I K + +G Q K
Sbjct: 719 VYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLNQSK 763
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 511 (184.9 bits), Expect = 1.0e-91, Sum P(2) = 1.0e-91
Identities = 145/456 (31%), Positives = 239/456 (52%)
Query: 6 DSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVV---EDVRFRKMV 62
+ E + E E + + + Q F LQ+L +K Y+K ++ E + + +
Sbjct: 57 EEEGEKKEREMMEEARQSRGNDSQEMRFKRLQHL--LEKSNIYSKFLLTKMEQQQQEEKL 114
Query: 63 SREEIELND-VSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLV----KWKGLSYA 117
+E +E V K+ D K+ +VER R + +T+E ++ K K A
Sbjct: 115 KKERLEKKAAVLKQKGSD--KKTVKVERKKRGREDYKIADVMTKEEIMSKAKKPKMEEEA 172
Query: 118 EATWEKD-EIIDFAQDAIDEYKAR-EAAMAEQGK-MVDLQRKKGKASLRKLDEQPEWLRG 174
+A+ + + E I+ D + K R + E K M+D +R + +QP+ G
Sbjct: 173 QASVKLEAEDIEKLSDTNSDIKGRLSETLRENSKQMLDPERTVNGQPVPA--QQPQLFTG 230
Query: 175 GKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVP 234
G +R YQ+EG+ +L W N N ILADEMGLGKT+Q ++ + + +++ GPFLVV P
Sbjct: 231 GVMRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMVE-KKVLGPFLVVAP 289
Query: 235 LSTLSNWAKEFRKWLPTMNVIVYVGTRASR-EVCQQYEFYNDKKVGRPIKFNTLLTTYEV 293
LSTL NW EF+++ P ++V++Y G + R ++ ++ + P+ ++T++E+
Sbjct: 290 LSTLPNWISEFKRFTPEVSVLLYHGPQKERLDLVKKIRQHQGSLRMCPV----VVTSFEI 345
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWA 353
++D+ L + WNYL+VDE HR+KN +L L T NKLL+TGTPLQN++ ELW+
Sbjct: 346 AMRDRKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKMLPTDNKLLLTGTPLQNNLSELWS 405
Query: 354 LLHFLDHDKFKSKDDFIQ--NYKNLSSFNENELAN---------LHMELRPHILRRIIKD 402
LL+FL D F F + ++S EN +AN LH+ L P +LRR+ D
Sbjct: 406 LLNFLLPDVFDDLKSFESWFDISTITSDAENIVANEREQNILHMLHLILTPFLLRRLKSD 465
Query: 403 VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDL 438
V +PPK E ++ ++ Q+ +Y I+ + L
Sbjct: 466 VTLEVPPKKEIVVYAPLTNKQEAFYMAIVNKTIAKL 501
Score = 488 (176.8 bits), Expect = 1.0e-91, Sum P(2) = 1.0e-91
Identities = 104/212 (49%), Positives = 140/212 (66%)
Query: 447 VSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLH 506
+ L NI++ LK+CCNH +L E Y D + D E+++ +SGK +ILD++L L
Sbjct: 574 LKLQNILMLLKRCCNHAYLIE-----YPLDPTTGDFKIDEQLVEASGKFLILDRMLPELK 628
Query: 507 ETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFL 566
+ H+VLIFSQM +LDIL +Y +G+++ RLDGS R + M F++ E F FL
Sbjct: 629 KRGHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSD-PEVFLFL 687
Query: 567 LSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEED 626
LSTRAGGLGINL +ADTVIIFDSDWNPQ DLQA R HRIGQ + V ++R +T+ +++E
Sbjct: 688 LSTRAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVHRLITANTIDEK 747
Query: 627 ILERAKKKMVLDHLVIQKLNAEGSWRRKKQRK 658
ILERA K L+ +VI K +GS KQ K
Sbjct: 748 ILERASAKRKLEKMVIHKNKFKGSKAELKQSK 779
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 591 (213.1 bits), Expect = 1.3e-91, Sum P(2) = 1.3e-91
Identities = 123/317 (38%), Positives = 197/317 (62%)
Query: 168 QPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPG 227
QP L+ L++YQL+GLN+L N + N ILADEMGLGKTVQS+S+L +L + G
Sbjct: 664 QPNMLKC-TLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAYLAETYNMWG 722
Query: 228 PFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTL 287
PFLVV P STL NW +E K++P V+ Y G R++ +++ + + F+ L
Sbjct: 723 PFLVVTPASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILRKFWDRKSLRYDKDSPFHVL 782
Query: 288 LTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNS 347
+T+Y++++ D A K+KW Y+++DEA +K+S + + +L + +N+LL+TGTP+QNS
Sbjct: 783 VTSYQLIVADIAYFQKMKWQYMILDEAQAIKSSSSSRWKSLLNLTCRNRLLLTGTPIQNS 842
Query: 348 VEELWALLHFLDHDKFKSKDDF-------IQNY-KNLSSFNENELANLHMELRPHILRRI 399
++ELWALLHF+ F S D+F I+++ ++ +S +E +L LHM L+P +LRRI
Sbjct: 843 MQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQLRRLHMILKPFMLRRI 902
Query: 400 IKDVEKSLPPKIERILRVEMSPLQKQYYKWILER------NFHDLNKGVRGNQVSLLNIV 453
K+V+ L K+E + +++ QK+ Y+ + + + +L + SL N+V
Sbjct: 903 KKNVQSELGDKVEIDVYCDLTTRQKKLYQQLRSQISMSDTDLLELESNSTSSDSSLANLV 962
Query: 454 VELKKCCNHPFLFESAD 470
++ +K CNHP LFE AD
Sbjct: 963 MQFRKVCNHPDLFERAD 979
Score = 416 (151.5 bits), Expect = 1.3e-91, Sum P(2) = 1.3e-91
Identities = 82/158 (51%), Positives = 110/158 (69%)
Query: 485 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK 544
++R I SGKL LD+LL+ L HR+LI+ QM RM+ I EY++YK +++ RLDGST
Sbjct: 1228 MDRFIAESGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTT 1287
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
E R + + + E F F+LSTRAGGLG+NL +ADTVI +DSDWNP D QAM RAH
Sbjct: 1288 IESRREMVQAWQT-NPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAH 1346
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 642
RIGQ + V ++R VT ++E+ ILERAK+K + LV+
Sbjct: 1347 RIGQTKQVKVFRLVTRNTIEQKILERAKEKEEIQKLVV 1384
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 504 (182.5 bits), Expect = 1.6e-91, Sum P(2) = 1.6e-91
Identities = 119/288 (41%), Positives = 167/288 (57%)
Query: 375 NLSSFNENELANLHMELRPHILRRIIKDVEKS----LPPKIERILRVEMSPLQKQYYKWI 430
N+ +E E L RP RR K + S P ++E+++ +M P + + +
Sbjct: 491 NMFGCSEKETVELSPTGRPR--RRARKSINYSKIDDFPNELEKLIS-QMQP-EVDRERAV 546
Query: 431 LERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIIL 490
+E N + V + L NI++ L+KCCNHP+L E Y D + E ++
Sbjct: 547 VETNI-PVESEVN---LKLQNIMMLLRKCCNHPYLIE-----YPIDPVTQEFKIDEELVT 597
Query: 491 SSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQ 550
+SGK +ILD++L L H+VL+FSQM RMLDIL +Y ++ F F RLDGS R +
Sbjct: 598 NSGKFLILDRMLPELKARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREK 657
Query: 551 AMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQE 610
M FN + F FL+STRAGGLGINL ADTVII+DSDWNPQ+DLQA R HRIGQ +
Sbjct: 658 NMHSFNTD-PDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTK 716
Query: 611 VVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRK 658
V +YR VT+ ++++ I+ERA K L+ L+I K + +G Q K
Sbjct: 717 PVVVYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLNQSK 764
Score = 493 (178.6 bits), Expect = 1.6e-91, Sum P(2) = 1.6e-91
Identities = 137/448 (30%), Positives = 235/448 (52%)
Query: 18 IKWKGQSHLHCQWKSFAELQNLSG-FKKVL--NYAKKVVEDVRFRKMVSREEIELNDVSK 74
+ W +S + +++ L S + K L ++ +E+ + ++ + R++ L
Sbjct: 54 MSWDRES-VDIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLERKKETLKVTKG 112
Query: 75 EMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAI 134
+ + ++N V R R +D S N+ E + K + LS A+ +++E + + +
Sbjct: 113 KNSIGASEENPVVTR--KKRGREDESYNIA-EVMSKEEILSVAKKNKKENEQKESSSSNL 169
Query: 135 ---DEYKAREAAMAEQGKMVDLQRKKGKA---SLRKLD------EQPEWLRGGKLRDYQL 182
D K +++ + ++ R+ K +RK + +QP+ GG +R YQ+
Sbjct: 170 CVEDLQKNKDSNSIIKDRLSQTVRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQV 229
Query: 183 EGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWA 242
EG+ +L W N N ILADEMGLGKTVQ ++ + L + +PGPFLV PLSTL NW
Sbjct: 230 EGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVPGPFLVCGPLSTLPNWM 288
Query: 243 KEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLS 302
EF+++ P + ++Y GT+ R + + K+ G ++T++E+ ++D+ L
Sbjct: 289 AEFQRFTPDIPTMLYHGTQQERRKLVK-NIH--KRKGTLQIHPVVITSFEIAMRDRNALQ 345
Query: 303 KIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDK 362
W YL+VDE HR+KN + +L L F+ NKLL+TGTPLQN++ ELW+LL+FL D
Sbjct: 346 HCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDV 405
Query: 363 FKSKDDFIQNYKNLSSFNE------------NELANLHMELRPHILRRIIKDVEKSLPPK 410
F F +++ +++S +E N L LH L P +LRR+ DV +PPK
Sbjct: 406 FDDLKSF-ESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPK 464
Query: 411 IERILRVEMSPLQKQYYKWILERNFHDL 438
E ++ +S Q+ +Y I+ R ++
Sbjct: 465 REVVVYAPLSKKQEIFYTAIVNRTIANM 492
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 610 (219.8 bits), Expect = 6.5e-91, Sum P(4) = 6.5e-91
Identities = 136/363 (37%), Positives = 223/363 (61%)
Query: 130 AQDAIDEYKAREAAMAEQGK-----MVDLQRK-KGKASLRKLD-EQPEWLRGGKLRDYQL 182
AQ A+ + + R A + K M D + + SL ++ QP L KL++YQL
Sbjct: 745 AQSAVQKAQERARAFDDPNKSTMDTMDDSELNFQNPTSLGDIEISQPTMLTA-KLKEYQL 803
Query: 183 EGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWA 242
+GLN+LVN + N ILADEMGLGKT+QS+S++ +L I GPFLV+ P STL NW
Sbjct: 804 KGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQ 863
Query: 243 KEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVG--RPIKFNTLLTTYEVVLKDKAV 300
+E K++P + V+ Y G R++ ++ F++ K + + +F+ L+T+Y++V+ D
Sbjct: 864 QEITKFVPNIKVLPYWGNAKDRKILRK--FWDRKHITYTKESEFHVLVTSYQLVVLDAQY 921
Query: 301 LSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDH 360
K+KW Y+++DEA +K+S++ + +L F +N+LL+TGTP+QN+++ELWALLHF+
Sbjct: 922 FQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMP 981
Query: 361 DKFKSKDDFIQNY-KNLSS-------FNENELANLHMELRPHILRRIIKDVEKSLPPKIE 412
F S D+F + + K++ S NE++L LHM L+P +LRR+ K V++ L K+E
Sbjct: 982 TLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQELGDKVE 1041
Query: 413 RILRVEMSPLQKQYYKWILER-NFHDL-NKGVRGNQV---SLLNIVVELKKCCNHPFLFE 467
+ + +++ Q+ Y + R + DL K G++ +L+N+V++ +K CNHP LFE
Sbjct: 1042 KDVFCDLTYRQRALYTNLRNRVSIMDLIEKAAVGDETDSTTLMNLVMQFRKVCNHPDLFE 1101
Query: 468 SAD 470
A+
Sbjct: 1102 RAE 1104
Score = 398 (145.2 bits), Expect = 6.5e-91, Sum P(4) = 6.5e-91
Identities = 80/162 (49%), Positives = 107/162 (66%)
Query: 481 DTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLD 540
+ + R + SGKL LD+LL L HRVL++ QM RM+D++ EY++Y+ +++ RLD
Sbjct: 1309 EVPSMRRFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLD 1368
Query: 541 GSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAM 600
GSTK E R + F + F FLLSTRAGGLGINL ADTVI +DSDWNP D QAM
Sbjct: 1369 GSTKLEDRRDTVADFQQR-PDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAM 1427
Query: 601 SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 642
RAHR+GQ V +YR +T ++EE I +RA +K + +VI
Sbjct: 1428 DRAHRLGQTRQVTVYRLITRSTIEERIRKRALQKEEVQRVVI 1469
Score = 47 (21.6 bits), Expect = 6.5e-91, Sum P(4) = 6.5e-91
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 125 EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKA 160
E +DF DA D+ R+AAMA V +++ +A
Sbjct: 725 EDLDF--DAEDDTALRQAAMANAQSAVQKAQERARA 758
Score = 47 (21.6 bits), Expect = 6.5e-91, Sum P(4) = 6.5e-91
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 29 QWKSFAELQNLSGFKKVLNYAKKVVEDVR-FRKMVSREEIELNDVSKEMDLDIIKQNSQV 87
Q + + E N S K AK+ + ++ F K REE +L ++++ +L+ K+ ++
Sbjct: 607 QSRKWQERTNKS-MKDTQARAKRTMREMMSFWKRNEREERDLRRLAEKQELESAKR-AEA 664
Query: 88 ER 89
ER
Sbjct: 665 ER 666
Score = 47 (21.6 bits), Expect = 6.5e-91, Sum P(4) = 6.5e-91
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 31 KSFAELQNLSGFKKVLNYAKK--VVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVE 88
KSF + N +G + YA + V+ +V+ +++ +E + K+M ++N+ V
Sbjct: 356 KSFEKQAN-AGMDR-FRYANEASVISEVQAKEIQDEKERK-----KDMQRKRRRENT-VR 407
Query: 89 RIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDE 136
+ ++ + N TQ+ K K L AE K + A + + E
Sbjct: 408 MEMQKKLEAELKANETQDSAEKAKFLREAERAQRKIKTTKRALEGVTE 455
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 613 (220.8 bits), Expect = 3.0e-90, Sum P(3) = 3.0e-90
Identities = 154/451 (34%), Positives = 249/451 (55%)
Query: 39 LSGFKKVLNYAKKVVE--DVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVERIIADRIS 96
++G + KK+ E D + S EE E +D + + ++ + E + ++ +
Sbjct: 1028 MNGSQMPTEQNKKIKEKNDQDDNESSSEEEEESSDDEGKTE----QEKKEEEELKSEALK 1083
Query: 97 KDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQG-KMVDLQR 155
K Q L+K K + K+ + + I E A M G M+D+
Sbjct: 1084 KTQKAIELQ--LLKTKTFD-RDVNKIKNSATEGGGETIPESLAVSDKMMVDGLPMIDMNS 1140
Query: 156 K--KGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSV 213
G ++ L +QP L L+ YQL+G+ ++VN + N ILADEMGLGKT+QS+
Sbjct: 1141 SIPPGFSTADTL-KQPTILNAD-LKPYQLKGMTWIVNLYDQGINGILADEMGLGKTIQSI 1198
Query: 214 SMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFY 273
++L L + I GPFL+V P STL NW EF K++P VI Y GT+ R ++Y +
Sbjct: 1199 AVLAHLAEEKNIWGPFLIVTPKSTLHNWKNEFAKFVPAFKVIPYWGTQQQRTTIRKY--W 1256
Query: 274 NDKKV-GRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFS 332
N KK+ R F+ L+T+Y V+++D+ +++W Y+++DEAH +K+S + + TL F+
Sbjct: 1257 NPKKLYHRNSPFHVLITSYNVIVRDEKYFHRLRWQYMVLDEAHAIKSSASNRWKTLMSFN 1316
Query: 333 TKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF-------IQNYK-NLSSFNENEL 384
+N+LL+TGTP+QNS+ ELWALLHF+ F S D+F I+N+ + NE++L
Sbjct: 1317 CRNRLLLTGTPIQNSMAELWALLHFIMPTFFDSHDEFAEWFSKDIENHAMSQGGLNEHQL 1376
Query: 385 ANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILER-NFHDLNKGV- 442
LHM L+P +LRRI +DVE +P K E + ++ QK+ Y+ I + +L G
Sbjct: 1377 NRLHMILKPFMLRRIKRDVENEMPSKTEVEVYCNLTHRQKKLYQSIRSNISITELLGGAS 1436
Query: 443 ---RGNQVSLLNIVVELKKCCNHPFLFESAD 470
+G+ +L+N V++ +K CNHP F+ ++
Sbjct: 1437 FSEQGSMKALMNFVMQFRKVCNHPETFKRSE 1467
Score = 404 (147.3 bits), Expect = 3.0e-90, Sum P(3) = 3.0e-90
Identities = 96/214 (44%), Positives = 130/214 (60%)
Query: 475 GDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGF 534
G TSI S + + SGKL +LDKLL L HRVLI+SQ +M++IL ++M ++ +
Sbjct: 1750 GSTSIWMPS-FSKSLNDSGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKY 1808
Query: 535 QFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQ 594
++ RLDGS+K + R +D F + S F FLLSTRA G+GINL +ADTVI +DSDWNP
Sbjct: 1809 KYLRLDGSSKLDDRRDMVDDFQSDPSI-FAFLLSTRACGIGINLTSADTVIFYDSDWNPT 1867
Query: 595 NDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRK 654
D QA RAHR+GQ V +YR +T ++EE IL+RAK+K + +VI E +
Sbjct: 1868 VDEQAQDRAHRLGQTRPVTVYRLITKNTIEEKILKRAKQKHQIQSIVIAGGKFESNPEEL 1927
Query: 655 KQRKGNE-LSAILRFGA-EELFKEDRNDEESKKR 686
Q NE +S +L EE FK + KKR
Sbjct: 1928 DQVGENEAISFLLDDDELEERFKNQIDPATGKKR 1961
Score = 43 (20.2 bits), Expect = 2.5e-29, Sum P(4) = 2.5e-29
Identities = 40/175 (22%), Positives = 74/175 (42%)
Query: 42 FKKVLNYAKKVVEDVRFRKMVSREEI-ELNDVSKEMDLDIIKQNSQVERIIADRISKDSS 100
F K AK+ E + EE+ E ++++ +I Q ++ ++ SS
Sbjct: 958 FDKDEREAKRRAEKEEANQRKREEEVQEAKRQQRKLNF-LISQTELYSHFMSKKLDDPSS 1016
Query: 101 GNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKA 160
G+ T + ++ ++ E+++ I D D E++ E+ + D +GK
Sbjct: 1017 GDATPATIGSL--MNGSQMPTEQNKKIKEKNDQDDN----ESSSEEEEESSD---DEGKT 1067
Query: 161 SLRKLDEQPEWLRGGKLRDYQ--LEGLNFL-VNSWRNDTNVIL--ADEMGLGKTV 210
K +E E L+ L+ Q +E L L ++ D N I A E G G+T+
Sbjct: 1068 EQEKKEE--EELKSEALKKTQKAIE-LQLLKTKTFDRDVNKIKNSATEGG-GETI 1118
Score = 42 (19.8 bits), Expect = 1.2e-89, Sum P(4) = 1.2e-89
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKR----KKKG 777
+PE + A+ +P TK + P+ +K KKKG
Sbjct: 1965 EPEVPSIADKPFSPNDIPTTKPVNKGRPPKEQSKEPKVPKKKG 2007
Score = 42 (19.8 bits), Expect = 3.1e-29, Sum P(4) = 3.1e-29
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 476 DTSINDTSKLERIILS 491
D + ND SKL+ I+LS
Sbjct: 632 DFNSNDHSKLDNILLS 647
Score = 42 (19.8 bits), Expect = 3.1e-29, Sum P(4) = 3.1e-29
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 58 FRKMVSREEIELNDVSKEMDL-DIIKQNSQVE 88
F + ++ E ELN +S E++L D N E
Sbjct: 1556 FSRFINLEPGELNKLSSELNLLDFYLLNQATE 1587
Score = 39 (18.8 bits), Expect = 1.2e-89, Sum P(4) = 1.2e-89
Identities = 13/56 (23%), Positives = 19/56 (33%)
Query: 1222 EAGIGPSHINGSASGSIDNDLNFSTFNRHAERQKGHKNVSTYQMTEPIHKGIDPKK 1277
EAG G G + + +T + + ST T P G+ P K
Sbjct: 2018 EAGGGGGGDGGGDTSTASTTTTATTTSSTTSSTNDPSSTSTSPTTSPPPTGVKPTK 2073
Score = 37 (18.1 bits), Expect = 3.0e-90, Sum P(3) = 3.0e-90
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 1266 TEPIHKGIDPKK 1277
T+P++KG PK+
Sbjct: 1984 TKPVNKGRPPKE 1995
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 744 (267.0 bits), Expect = 3.0e-90, Sum P(3) = 3.0e-90
Identities = 168/403 (41%), Positives = 253/403 (62%)
Query: 167 EQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ-I 225
+QP L GG+L YQLEGL +LV+ + N+ + ILADEMGLGKT+Q++S+ +L+ + I
Sbjct: 874 KQPSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLKEFKNNI 933
Query: 226 PGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFN 285
L++VPLSTL NW EF +W P++NVI Y G + R+ + KK+ F+
Sbjct: 934 NVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERK-------HIAKKLLEQT-FD 985
Query: 286 TLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQ 345
+TT+++V+K+K+ L KI WNY++VDE HR+KN++++ + LSEF +K ++L+TGTPLQ
Sbjct: 986 ICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYRILLTGTPLQ 1045
Query: 346 NSVEELWALLHFLDHDKFKSKDDF-------IQNYKNL-SSFNENE---LAN-LHMELRP 393
N++ ELW+LL+FL F S DF + N K++ E E + N LH L P
Sbjct: 1046 NNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHSVLLP 1105
Query: 394 HILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIV 453
+LRR+ KDV KSLP K E + +E+S QK YK I + F +N NIV
Sbjct: 1106 FMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFKQVNHNGSITTKIFQNIV 1165
Query: 454 VELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVL 513
++L+K NHP+LF Y D +I+ E II SGK +LD++L +L + KH+VL
Sbjct: 1166 MQLRKIVNHPYLFL-----Y--DYNID-----ENIIKCSGKFEVLDRMLPKLLKFKHKVL 1213
Query: 514 IFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFN 556
IFSQM ++++IL +Y+ ++G+++ RLDG+ + R + +D FN
Sbjct: 1214 IFSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFN 1256
Score = 264 (98.0 bits), Expect = 3.0e-90, Sum P(3) = 3.0e-90
Identities = 84/259 (32%), Positives = 128/259 (49%)
Query: 544 KAELRH-QAMDHFNAPG-SED-FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAM 600
K E+ Q MD N G ++D F+LSTR+G LG+NL TADTVIIFDSD+NP D+QAM
Sbjct: 1382 KEEINDFQIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAM 1441
Query: 601 SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ-----KL-NAEGSWRRK 654
R HRIGQ+ VV ++RF+T VEE + ++A+ K+ ++ VIQ K+ N E +
Sbjct: 1442 CRCHRIGQKNVVKVFRFITLSGVEELVFKKAQHKLSINDKVIQAGLFNKIYNDEDRQNKL 1501
Query: 655 KQR-KGNELSAILRFGAEEL---FKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
K + N+ + + L + RN+EE + L D D
Sbjct: 1502 KDIIQRNQKNDMTTHPTNPLLLNYYMKRNEEELEYFL---DFDKRYFGEQYFSLLNTLNV 1558
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQ-AEDALAPRAARNTKSYAEANEPER 769
F + E++ ++ S IK E + ED + RN + + ++ +
Sbjct: 1559 ENVDSGQ-FTYMSEDEKEENETYLSSIIKKEKKEEEGEDDEENQRDRNKEEDQDEDKDDD 1617
Query: 770 SNKRKKKGSELQEPQERVH 788
+K K K E +E ++R H
Sbjct: 1618 KDKDKDKDKEEEEEKKRKH 1636
Score = 56 (24.8 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 29/121 (23%), Positives = 55/121 (45%)
Query: 366 KDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQ 425
KDD ++N K + N+NE + ME + + KD E + +++++ +++
Sbjct: 204 KDDEMENKKEKN--NKNEKDD-EMENKKEKNNKNEKDDE--IKENMDKVMENQLNQSNIL 258
Query: 426 YYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKL 485
Y K + +N ++L VS NI+ + K F + GY +TS T+ +
Sbjct: 259 YNKDRIRKNRNNLKDE---KDVSNKNILDDNKDIVE--FKLQDISSGYS-ETSCKSTNSI 312
Query: 486 E 486
E
Sbjct: 313 E 313
Score = 43 (20.2 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 20/86 (23%), Positives = 33/86 (38%)
Query: 373 YKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILE 432
+ N+SS + L + EL H + EK KI L Q K ILE
Sbjct: 668 HNNISSLKQYMLISNWKELTKHNNYMTLLSEEKKRNSKILANLCYNQMKAIDQKRKIILE 727
Query: 433 RNFHDLNKGVRGNQVSLLNIVVELKK 458
+ + K ++ N + +++ K
Sbjct: 728 KEERERMKLLKDNDIEAYMKLIKTAK 753
Score = 42 (19.8 bits), Expect = 5.8e-67, Sum P(3) = 5.8e-67
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 763 EANEPERSN--KRKKKGSELQEPQERVHKRRKAE 794
E NE S+ K++KK E ++ +E R K E
Sbjct: 1575 EENETYLSSIIKKEKKEEEGEDDEENQRDRNKEE 1608
Score = 39 (18.8 bits), Expect = 1.2e-66, Sum P(3) = 1.2e-66
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 758 TKSYAEANEPERSNKRKKKGSE 779
TK Y++ ++P ++K + K E
Sbjct: 1752 TKEYSDTHDPYINDKMQVKDEE 1773
Score = 37 (18.1 bits), Expect = 3.0e-90, Sum P(3) = 3.0e-90
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 6 DSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGF-KKVLNYAK 50
+SE + N M L +W + +S + Q+ G KK +N K
Sbjct: 518 NSENNINNMNILNEWTNFMDQNINIESISPEQHKKGNRKKKINTKK 563
Score = 37 (18.1 bits), Expect = 1.9e-66, Sum P(3) = 1.9e-66
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 657 RKGNELSAILRFGAEELFKEDRNDEESKKR 686
+KG + + + +E +D N + KKR
Sbjct: 1964 KKGKKRNNSMEHTKQECHVDDENKKRVKKR 1993
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 744 (267.0 bits), Expect = 3.0e-90, Sum P(3) = 3.0e-90
Identities = 168/403 (41%), Positives = 253/403 (62%)
Query: 167 EQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ-I 225
+QP L GG+L YQLEGL +LV+ + N+ + ILADEMGLGKT+Q++S+ +L+ + I
Sbjct: 874 KQPSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLKEFKNNI 933
Query: 226 PGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFN 285
L++VPLSTL NW EF +W P++NVI Y G + R+ + KK+ F+
Sbjct: 934 NVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERK-------HIAKKLLEQT-FD 985
Query: 286 TLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQ 345
+TT+++V+K+K+ L KI WNY++VDE HR+KN++++ + LSEF +K ++L+TGTPLQ
Sbjct: 986 ICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYRILLTGTPLQ 1045
Query: 346 NSVEELWALLHFLDHDKFKSKDDF-------IQNYKNL-SSFNENE---LAN-LHMELRP 393
N++ ELW+LL+FL F S DF + N K++ E E + N LH L P
Sbjct: 1046 NNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHSVLLP 1105
Query: 394 HILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIV 453
+LRR+ KDV KSLP K E + +E+S QK YK I + F +N NIV
Sbjct: 1106 FMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFKQVNHNGSITTKIFQNIV 1165
Query: 454 VELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVL 513
++L+K NHP+LF Y D +I+ E II SGK +LD++L +L + KH+VL
Sbjct: 1166 MQLRKIVNHPYLFL-----Y--DYNID-----ENIIKCSGKFEVLDRMLPKLLKFKHKVL 1213
Query: 514 IFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFN 556
IFSQM ++++IL +Y+ ++G+++ RLDG+ + R + +D FN
Sbjct: 1214 IFSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFN 1256
Score = 264 (98.0 bits), Expect = 3.0e-90, Sum P(3) = 3.0e-90
Identities = 84/259 (32%), Positives = 128/259 (49%)
Query: 544 KAELRH-QAMDHFNAPG-SED-FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAM 600
K E+ Q MD N G ++D F+LSTR+G LG+NL TADTVIIFDSD+NP D+QAM
Sbjct: 1382 KEEINDFQIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAM 1441
Query: 601 SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ-----KL-NAEGSWRRK 654
R HRIGQ+ VV ++RF+T VEE + ++A+ K+ ++ VIQ K+ N E +
Sbjct: 1442 CRCHRIGQKNVVKVFRFITLSGVEELVFKKAQHKLSINDKVIQAGLFNKIYNDEDRQNKL 1501
Query: 655 KQR-KGNELSAILRFGAEEL---FKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXX 710
K + N+ + + L + RN+EE + L D D
Sbjct: 1502 KDIIQRNQKNDMTTHPTNPLLLNYYMKRNEEELEYFL---DFDKRYFGEQYFSLLNTLNV 1558
Query: 711 XXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQ-AEDALAPRAARNTKSYAEANEPER 769
F + E++ ++ S IK E + ED + RN + + ++ +
Sbjct: 1559 ENVDSGQ-FTYMSEDEKEENETYLSSIIKKEKKEEEGEDDEENQRDRNKEEDQDEDKDDD 1617
Query: 770 SNKRKKKGSELQEPQERVH 788
+K K K E +E ++R H
Sbjct: 1618 KDKDKDKDKEEEEEKKRKH 1636
Score = 56 (24.8 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 29/121 (23%), Positives = 55/121 (45%)
Query: 366 KDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQ 425
KDD ++N K + N+NE + ME + + KD E + +++++ +++
Sbjct: 204 KDDEMENKKEKN--NKNEKDD-EMENKKEKNNKNEKDDE--IKENMDKVMENQLNQSNIL 258
Query: 426 YYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKL 485
Y K + +N ++L VS NI+ + K F + GY +TS T+ +
Sbjct: 259 YNKDRIRKNRNNLKDE---KDVSNKNILDDNKDIVE--FKLQDISSGYS-ETSCKSTNSI 312
Query: 486 E 486
E
Sbjct: 313 E 313
Score = 43 (20.2 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 20/86 (23%), Positives = 33/86 (38%)
Query: 373 YKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILE 432
+ N+SS + L + EL H + EK KI L Q K ILE
Sbjct: 668 HNNISSLKQYMLISNWKELTKHNNYMTLLSEEKKRNSKILANLCYNQMKAIDQKRKIILE 727
Query: 433 RNFHDLNKGVRGNQVSLLNIVVELKK 458
+ + K ++ N + +++ K
Sbjct: 728 KEERERMKLLKDNDIEAYMKLIKTAK 753
Score = 42 (19.8 bits), Expect = 5.8e-67, Sum P(3) = 5.8e-67
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 763 EANEPERSN--KRKKKGSELQEPQERVHKRRKAE 794
E NE S+ K++KK E ++ +E R K E
Sbjct: 1575 EENETYLSSIIKKEKKEEEGEDDEENQRDRNKEE 1608
Score = 39 (18.8 bits), Expect = 1.2e-66, Sum P(3) = 1.2e-66
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 758 TKSYAEANEPERSNKRKKKGSE 779
TK Y++ ++P ++K + K E
Sbjct: 1752 TKEYSDTHDPYINDKMQVKDEE 1773
Score = 37 (18.1 bits), Expect = 3.0e-90, Sum P(3) = 3.0e-90
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 6 DSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGF-KKVLNYAK 50
+SE + N M L +W + +S + Q+ G KK +N K
Sbjct: 518 NSENNINNMNILNEWTNFMDQNINIESISPEQHKKGNRKKKINTKK 563
Score = 37 (18.1 bits), Expect = 1.9e-66, Sum P(3) = 1.9e-66
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 657 RKGNELSAILRFGAEELFKEDRNDEESKKR 686
+KG + + + +E +D N + KKR
Sbjct: 1964 KKGKKRNNSMEHTKQECHVDDENKKRVKKR 1993
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 584 (210.6 bits), Expect = 3.9e-90, Sum P(3) = 3.9e-90
Identities = 122/318 (38%), Positives = 195/318 (61%)
Query: 167 EQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIP 226
+QP+ L KL++YQL+GLN+L N + N ILADEMGLGKTVQS+S++ +L I
Sbjct: 833 KQPKMLMC-KLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIW 891
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNT 286
GPFLV+ P STL NW +E +++P + I Y G+ R++ +++ + F+
Sbjct: 892 GPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHV 951
Query: 287 LLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQN 346
++T+Y++V+ D +KW Y+++DEA +K+S + + +L F +N+LL+TGTP+QN
Sbjct: 952 VVTSYQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQN 1011
Query: 347 SVEELWALLHFLDHDKFKSKDDFIQNY-KNLSS-------FNENELANLHMELRPHILRR 398
+++ELWALLHF+ F S ++F + + K++ S NE +L LHM L+P +LRR
Sbjct: 1012 TMQELWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQLKRLHMILKPFMLRR 1071
Query: 399 IIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHD---LNKGVRGNQ---VSLLNI 452
+ K+V+ L KIE+ + +++ QK Y+ L R L K + G S++N+
Sbjct: 1072 VKKNVQSELGEKIEKEVYCDLTQRQKILYQ-ALRRQISIAELLEKAILGGDDTVASIMNL 1130
Query: 453 VVELKKCCNHPFLFESAD 470
V++ +K CNHP LFE D
Sbjct: 1131 VMQFRKVCNHPDLFERED 1148
Score = 427 (155.4 bits), Expect = 3.9e-90, Sum P(3) = 3.9e-90
Identities = 102/227 (44%), Positives = 136/227 (59%)
Query: 436 HDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKL 495
H L + ++G + ++N K L S G +++ S L R I SGKL
Sbjct: 1373 HYLYQPLKGEEDLIINNQAVSKLPIPRKPLLPSFGIAKGSYSNVRIPSML-RFIADSGKL 1431
Query: 496 VILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHF 555
LDKLLV L HRVLI+ QM RM+D++ EY++++ +++ RLDGS+K R + +
Sbjct: 1432 SKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRDMVTEW 1491
Query: 556 NAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIY 615
E F FLLSTRAGGLGINL ADTVI +DSDWNP D QAM RAHRIGQQ+ V +Y
Sbjct: 1492 QTR-PELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQKQVTVY 1550
Query: 616 RFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQR--KGN 660
RF+T ++EE I+ RAK+K + +VI + G R KQ KGN
Sbjct: 1551 RFITRGTIEERIVIRAKEKEEVQKVVI----SGGETRPTKQMDLKGN 1593
Score = 50 (22.7 bits), Expect = 5.2e-35, Sum P(2) = 5.2e-35
Identities = 26/99 (26%), Positives = 41/99 (41%)
Query: 314 AHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNY 373
A +L + +Q T + K+KL + T NSV LD D+ S DD +
Sbjct: 268 AQKLSPNSSQSQITHNR--RKHKLPLNATT-NNSVVLTPDTSPLLDSDEVVSDDDSNEQQ 324
Query: 374 KNLSSFNE-NELANLHMELRPHILRRIIKDVEKSLPPKI 411
+ FN L N E H +R + D+ S+ ++
Sbjct: 325 TMMMKFNYLQHLRNKRDEA-VHAEKRRLLDIRGSIHDRL 362
Score = 39 (18.8 bits), Expect = 1.8e-49, Sum P(3) = 1.8e-49
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 896 NDLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSK 935
+D + + L + +++ + D ++ V S L + WSK
Sbjct: 1121 DDTVASIMNLVMQFRKVCNHPDLFEREDVRSPLSLATWSK 1160
Score = 37 (18.1 bits), Expect = 3.9e-90, Sum P(3) = 3.9e-90
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 115 SYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKK 157
S +E ++ DE D + A++ + E ++ D R++
Sbjct: 763 SVSEINFDSDEEEDIRRLAVESAQEAVQKAREHSQLFDANRQQ 805
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 917 (327.9 bits), Expect = 1.6e-89, Sum P(3) = 1.6e-89
Identities = 214/540 (39%), Positives = 314/540 (58%)
Query: 164 KLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 223
K+ EQ + G L++YQ++GL +LV+ + N+ N ILADEMGLGKT+Q++S++ +L + +
Sbjct: 760 KVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRK 819
Query: 224 QIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIK 283
++ GP+L++VPLSTL NW EF KW P + V+ Y G+ R + Q + K
Sbjct: 820 KVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQN-QMRATKFNVLLTT 878
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 343
+ ++ V+ K + I + M + H K + Q+ T + +LL+TGTP
Sbjct: 879 YEYVIKDKAVLAKIQWKYMIIDEGHRMKN--HHCKLT--QVLNT--HYIAPYRLLLTGTP 932
Query: 344 LQNSVEELWALLHFLDHDKFKSKDDFIQNYK-------NLSSFNENE----LANLHMELR 392
LQN + ELWALL+FL FKS F Q + NE E + LH LR
Sbjct: 933 LQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLR 992
Query: 393 PHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKW-----ILERNFHDLNKGVRGNQV 447
P +LRR+ K+VE LP K+E I++ +MS LQ+ YK +L + + K +G
Sbjct: 993 PFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAK 1052
Query: 448 SLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHE 507
+L+N +V+L+K CNHPF+F+ + Y T + + SGK +LD++L +L
Sbjct: 1053 ALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKA 1112
Query: 508 TKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLL 567
T HRVL+F QM + + I+ +Y+ ++ F + RLDG+TKAE R + + FNA GS+ F FLL
Sbjct: 1113 TNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLL 1172
Query: 568 STRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDI 627
STRAGGLG+NL TADTV+IFDSDWNP DLQA RAHRIGQ+ V + R +T SVEE I
Sbjct: 1173 STRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERI 1232
Query: 628 LERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESKKRL 687
L A+ K+ +D VIQ G + +K G+E L + + +D N+EE + +
Sbjct: 1233 LAAARYKLNMDEKVIQA----GMFDQKST--GSERQQFL----QTILHQDDNEEEEENEV 1282
Score = 52 (23.4 bits), Expect = 1.6e-89, Sum P(3) = 1.6e-89
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 122 EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGK 176
+KD+ + F DEY + M +Q K D +KK + R + + E L G+
Sbjct: 586 KKDKRLAFLLSQTDEYISNLTQMVKQHKD-DQMKKKEEEGKRLIQFKKELLMSGE 639
Score = 40 (19.1 bits), Expect = 1.6e-89, Sum P(3) = 1.6e-89
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 763 EANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
E ++ +R +++K E + + KRR+ +
Sbjct: 1389 EEDDSKRKRRKRKNRKEESDDDSLILKRRRRQ 1420
Score = 39 (18.8 bits), Expect = 2.0e-89, Sum P(3) = 2.0e-89
Identities = 20/89 (22%), Positives = 36/89 (40%)
Query: 1023 KGREKSENILNMPISRLKRDKKGKPGSAKVNFQT------TKD-----RFHKPQRVEQPL 1071
+ E+ E M R K D++ PG ++ ++ TKD RFH + ++
Sbjct: 1294 RSEEEIEIFKRMDAERKKEDEEIHPGRERLIDESELPDWLTKDDDEVERFH--YQYDEDT 1351
Query: 1072 TKEEGEMSDNEEVY-EQFKEVKWMEWCED 1099
G E Y + E +W++ +D
Sbjct: 1352 ILGRGSRQRKEVDYTDSLTEKEWLKAIDD 1380
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 488 (176.8 bits), Expect = 2.1e-88, Sum P(2) = 2.1e-88
Identities = 136/434 (31%), Positives = 229/434 (52%)
Query: 33 FAELQNLSGFKKVLNYAKKVV---EDVRFRKMVSREEIELNDVSKEMD--LDIIKQNSQV 87
+ LQ+L +K Y+K ++ E + + +E++E S ++ ++ N +
Sbjct: 49 YRRLQHL--LEKSNIYSKFLLTKMEQQQLEEQKKKEKLEKKKRSLKLTEGKSLVDGNGEK 106
Query: 88 ERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWE-KDEIIDFAQDAIDEY-KAREAAMA 145
+ R +D S N++ E + K + LS A+ + +DE +++ K +++
Sbjct: 107 PVMKKKRGREDESYNIS-EVMSKEEILSVAKKHKDNEDESSSTTSLCVEDIQKNKDSNSM 165
Query: 146 EQGKMVDLQRKKGKA---SLRKLD------EQPEWLRGGKLRDYQLEGLNFLVNSWRNDT 196
+ ++ R+ K +RK + +QP+ GG +R YQ+EG+ +L W N
Sbjct: 166 IKDRLSQTVRQNSKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGMEWLRMLWENGI 225
Query: 197 NVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIV 256
N ILADEMGLGKTVQ ++ + L + +PGPFLV PLSTL NW EF+++ P + ++
Sbjct: 226 NGILADEMGLGKTVQCIATIA-LMIQRGVPGPFLVCGPLSTLPNWMAEFKRFTPEIPTLL 284
Query: 257 YVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHR 316
Y GTR R + + K+ G ++T++E+ ++D+ L W YL+VDE HR
Sbjct: 285 YHGTREDRRKLVK-NIH--KRQGTLQIHPVVVTSFEIAMRDQNALQHCYWKYLIVDEGHR 341
Query: 317 LKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNL 376
+KN + +L L F+ NKLL+TGTPLQN++ ELW+LL+FL D F F +++ ++
Sbjct: 342 IKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSF-ESWFDI 400
Query: 377 SSFNE------------NELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQK 424
+S +E N L LH L P +LRR+ DV +PPK E ++ + Q+
Sbjct: 401 TSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLCNKQE 460
Query: 425 QYYKWILERNFHDL 438
+Y I+ R ++
Sbjct: 461 IFYTAIVNRTIANM 474
Score = 480 (174.0 bits), Expect = 2.1e-88, Sum P(2) = 2.1e-88
Identities = 118/294 (40%), Positives = 168/294 (57%)
Query: 375 NLSSFNENELANLHMELRPHILRRIIKDVEKS----LPPKIERILRVEMSPLQKQYYKWI 430
N+ E E L RP RR K + S P ++E+++ ++ P + + +
Sbjct: 473 NMFGSCEKETVELSPTGRPK--RRSRKSINYSELDQFPSELEKLIS-QIQP-EVNRERTV 528
Query: 431 LERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIIL 490
+E N + V + L NI++ L+KCCNHP++ E Y D + E ++
Sbjct: 529 VEGNI-PIESEVN---LKLRNIMMLLRKCCNHPYMIE-----YPIDPVTQEFKIDEELVT 579
Query: 491 SSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQ 550
+SGK +ILD++L L + H+VL+FSQM MLDIL +Y + F F RLDGS R +
Sbjct: 580 NSGKFLILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREK 639
Query: 551 AMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQE 610
+ FN + F FL+STRAGGLGINL ADTVII+DSDWNPQ+DLQA R HRIGQ +
Sbjct: 640 NIYSFNTD-PDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTK 698
Query: 611 VVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSA 664
V +YR VT+ ++++ I+ERA K L+ L+I K + +G Q K N L A
Sbjct: 699 PVVVYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLSQSK-NFLDA 751
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 601 (216.6 bits), Expect = 6.8e-88, Sum P(4) = 6.8e-88
Identities = 150/422 (35%), Positives = 228/422 (54%)
Query: 62 VSREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDS--SGNVTQEYL---VKWKGLSY 116
+ RE++E KE D ++ +++ + K S S ++T E L G
Sbjct: 441 MKREKLEEQKARKEACGDN-EEKMEIDESPSSDAQKPSTSSSDLTAEQLQDPTAEDGNGD 499
Query: 117 AEATWEKDEIIDF-AQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGG 175
E + + +QD+ DE + A +AE+ + Q K ++ +L G
Sbjct: 500 GHGVLENVDYVKLNSQDS-DERQQELANIAEEA--LKFQPKGYTLETTQVKTPVPFLIRG 556
Query: 176 KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPL 235
+LR+YQ+ GL+++V + + N ILADEMGLGKT+Q++S+L + ++ I GP L+VVP
Sbjct: 557 QLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMACSESIWGPHLIVVPT 616
Query: 236 STLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVG--RPIKFNTLLTTYEV 293
S + NW EF+KW P + ++ Y GT R +K+ G +P F+ +T+Y+
Sbjct: 617 SVILNWEMEFKKWCPALKILTYFGTAKERA---------EKRKGWMKPNCFHVCITSYKT 667
Query: 294 VLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWA 353
V +D + W YL++DEA +KN ++Q + L + +LL+TGTPLQNS+ ELW+
Sbjct: 668 VTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMELWS 727
Query: 354 LLHFLDHDKFKSKDDFIQNYKN-LSS-------FNENELANLHMELRPHILRRIIKDVEK 405
L+HFL F S DDF + N L+ FN + LH LRP ILRR+ K+VEK
Sbjct: 728 LMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPFILRRLKKEVEK 787
Query: 406 SLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFL 465
LP K E I+ +S Q+ Y + R N GN +S+LNIV++L+KCCNHP L
Sbjct: 788 QLPEKTEHIVNCSLSKRQRYLYDDFMSRRSTKENLK-SGNMMSVLNIVMQLRKCCNHPNL 846
Query: 466 FE 467
FE
Sbjct: 847 FE 848
Score = 395 (144.1 bits), Expect = 6.8e-88, Sum P(4) = 6.8e-88
Identities = 80/161 (49%), Positives = 109/161 (67%)
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGST 543
+L I GKL L LL +L+ KHR LIF+QM +MLD+L ++S+ G+Q+ RLDG+T
Sbjct: 1179 ELRLIEYDCGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTT 1238
Query: 544 KAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 603
E R M+ FNA + FCF+LSTR+GG+G+NL ADTVI +DSDWNP D QA R
Sbjct: 1239 GVEQRQAMMERFNAD-PKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRC 1297
Query: 604 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK 644
HRIGQ V+IYR ++ +++EE+IL +A +K L L I +
Sbjct: 1298 HRIGQTRNVSIYRLISERTIEENILRKATQKRRLGELAIDE 1338
Score = 49 (22.3 bits), Expect = 6.8e-88, Sum P(4) = 6.8e-88
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 810 VRDWSYGNLSKRDATRFYRAVMKFGNQSQISLIARDAGGAVATAP 854
V +W + + + TRF+R+ + + Q+ + ++ G VA+ P
Sbjct: 1743 VLNWEFVSNAVNKQTRFFRSARQCSIRYQMFVRPKELGQLVASDP 1787
Score = 46 (21.3 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 134 IDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWR 193
++ REA + ++ +L RK G S +L + E R DY LE + ++ +R
Sbjct: 199 VERAAKREAHVL--ARIAEL-RKNGLWSNSRLPKCVEPERNKTHWDYLLEEVKWMAVDFR 255
Query: 194 NDTN 197
+TN
Sbjct: 256 TETN 259
Score = 44 (20.5 bits), Expect = 4.9e-29, Sum P(4) = 4.9e-29
Identities = 23/104 (22%), Positives = 50/104 (48%)
Query: 112 KGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEW 171
K +++A A +D+ I+ + A E K + A KMV R ++ + +D + +
Sbjct: 266 KVIAHAIAKQHRDKQIEIERAAEREIKEKRKMCAGIAKMV---RDFWSSTDKVVDIRAKE 322
Query: 172 LRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSM 215
+ +LR + + L F++ +N++ + GL + +S S+
Sbjct: 323 VLESRLRKARNKHLMFVIGQVDEMSNIV---QEGLVSSSKSPSI 363
Score = 43 (20.2 bits), Expect = 2.9e-87, Sum P(4) = 2.9e-87
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 1086 EQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLPKEKVASVFPSF--CWHIP 1138
EQ E + + C ++ Q+ L A +D L ++ SV+ + C +P
Sbjct: 1553 EQMNEARLPQVCHEMRRPLAEKQQKQNTLNAFNDILSAKEKESVYDAVNKCLQMP 1607
Score = 40 (19.1 bits), Expect = 6.8e-88, Sum P(4) = 6.8e-88
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 742 AVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHK 789
A+A+ ED AA+ + A + E K S LQ +E K
Sbjct: 1381 AMAKCEDEADVNAAKIAVAEANVDNAEFDEKSLPPMSNLQGDEEADEK 1428
Score = 40 (19.1 bits), Expect = 3.5e-51, Sum P(3) = 3.5e-51
Identities = 8/37 (21%), Positives = 22/37 (59%)
Query: 885 LLDFFGVSVKANDLINR--VEELQLLAKRISRYEDPI 919
+ +F ++V+ ++++ +E +LL +R Y +P+
Sbjct: 1089 IAEFPRLAVEEDEVVQERLLEYCELLVQRFGMYVEPV 1125
Score = 40 (19.1 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 14/72 (19%), Positives = 31/72 (43%)
Query: 123 KDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKG----KASLRKLDEQPEWLRGGKLR 178
++++ + ++ ++E KAR+ A + + +++ K S D E L+
Sbjct: 435 QEDLEEMKREKLEEQKARKEACGDNEEKMEIDESPSSDAQKPSTSSSDLTAEQLQDPTAE 494
Query: 179 DYQLEGLNFLVN 190
D +G L N
Sbjct: 495 DGNGDGHGVLEN 506
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 540 (195.1 bits), Expect = 4.8e-86, Sum P(2) = 4.8e-86
Identities = 135/431 (31%), Positives = 244/431 (56%)
Query: 30 WKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMDLDI------IKQ 83
WK + ++ K+ ++ +DV + V R++ +LN + + +L + Q
Sbjct: 380 WKRYERVERDQRRKQEREAEEQRKQDVELIE-VKRQQRKLNFLITQTELYAHFMSKKLGQ 438
Query: 84 NSQVERI-IADRISKDSSGNVT--QEY---LVKWKGLSYAEATWEKDEIIDFAQDAIDEY 137
S+ +++ I ++ ++++ + +Y +K AEA ++D A D +
Sbjct: 439 GSEEDQLRILSQLDEETNARLAAQDDYDAGEMKLLAQENAEAAMQRDLDKTRAFDVFAKK 498
Query: 138 KAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTN 197
K +E Q + D+ + + + ++ L QP+ +G L+ YQ++G+ +L N + +
Sbjct: 499 KEKEEEEQAQESVEDI-KPEPRPEMKDLP-QPKMFKG-TLKGYQIKGMTWLANIYDQGIS 555
Query: 198 VILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVY 257
ILADEMGLGKTVQS++ L + + GPFLV+ P STL NW +E +++P V+ Y
Sbjct: 556 GILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSRFVPDFKVVPY 615
Query: 258 VGTRASREVCQQYEFYNDKKVG-RPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHR 316
G+ A R++ +Q F++ K + R F+ ++T+Y++V+ D ++IKW Y+++DEA
Sbjct: 616 WGSPAERKILRQ--FWDQKHLHTRDASFHVVITSYQLVVSDYKYFNRIKWQYMVLDEAQA 673
Query: 317 LKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDF------- 369
+K++ +Q + L FS +N+LL++GTP+QNS+ ELWALLHF+ F S D+F
Sbjct: 674 IKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDEFNEWFSKD 733
Query: 370 IQNY-KNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
I+++ +N + +E +++ LHM L+P +LRRI KDVE L KIE ++ ++ QK Y+
Sbjct: 734 IESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIEIMVYCPLTIRQKLLYR 793
Query: 429 WILER-NFHDL 438
+ ++ DL
Sbjct: 794 ALKQKIRIEDL 804
Score = 419 (152.6 bits), Expect = 4.8e-86, Sum P(2) = 4.8e-86
Identities = 88/184 (47%), Positives = 120/184 (65%)
Query: 473 YGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYK 532
+GG +SI K E +I +GKL +LD LL RL HRVLI+SQM +M+D+L EYM ++
Sbjct: 1137 HGGWSSIVVPDK-ETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHR 1195
Query: 533 GFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWN 592
++ RLDGS+K R + F ++ F FLLSTRAGGLGINL ADTVI +DSDWN
Sbjct: 1196 KHRYMRLDGSSKISARRDMVADFQTR-ADIFVFLLSTRAGGLGINLTAADTVIFYDSDWN 1254
Query: 593 PQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWR 652
P D QAM RAHR+GQ + V +YR + ++EE IL+RA++K + +VI N +
Sbjct: 1255 PTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTL 1314
Query: 653 RKKQ 656
+ K+
Sbjct: 1315 KPKE 1318
Score = 349 (127.9 bits), Expect = 1.5e-65, Sum P(2) = 1.5e-65
Identities = 133/474 (28%), Positives = 230/474 (48%)
Query: 29 QWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVE 88
Q K EL + ++ LN+ + + + +S++ L S+E L I+ SQ++
Sbjct: 401 QRKQDVELIEVKRQQRKLNFL--ITQTELYAHFMSKK---LGQGSEEDQLRIL---SQLD 452
Query: 89 RIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQG 148
R++ + + L+ + AEA ++D A D + K +E Q
Sbjct: 453 EETNARLAAQDDYDAGEMKLLAQEN---AEAAMQRDLDKTRAFDVFAKKKEKEEEEQAQE 509
Query: 149 KMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGK 208
+ D+ + + + ++ L QP+ +G L+ YQ++G+ +L N + + ILADEMGLGK
Sbjct: 510 SVEDI-KPEPRPEMKDLP-QPKMFKG-TLKGYQIKGMTWLANIYDQGISGILADEMGLGK 566
Query: 209 TVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQ 268
TVQS++ L + + GPFLV+ P STL NW +E +++P V+ Y G+ A R++ +
Sbjct: 567 TVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILR 626
Query: 269 QY-----------EFY----NDKKVGRPIK-FNTLLTTYEVVLKDKAVLSKI--KWNYLM 310
Q+ F+ + + V K FN + Y V+ + +A+ S +W L+
Sbjct: 627 QFWDQKHLHTRDASFHVVITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLL 686
Query: 311 VDEA-HRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFK---SK 366
+RL S + +++E LL P F HD+F SK
Sbjct: 687 GFSCRNRLLLSGTPIQNSMAELWA---LLHFIMPTL-----------FDSHDEFNEWFSK 732
Query: 367 DDFIQNY-KNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQ 425
D I+++ +N + +E +++ LHM L+P +LRRI KDVE L KIE ++ ++ QK
Sbjct: 733 D--IESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIEIMVYCPLTIRQKL 790
Query: 426 YYKWILER-NFHDLNKGVRGNQVS--------LLNIVVELKKCCNHPFLFESAD 470
Y+ + ++ DL G+ + L+N+V++ +K CNHP LFE D
Sbjct: 791 LYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHPELFERRD 844
Score = 38 (18.4 bits), Expect = 6.4e-46, Sum P(2) = 6.4e-46
Identities = 11/58 (18%), Positives = 27/58 (46%)
Query: 610 EVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILR 667
+ V Y + +V++ ++RA + + + +L +G+ + ++ E S I R
Sbjct: 1244 DTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQR 1301
Score = 37 (18.1 bits), Expect = 9.3e-33, Sum P(2) = 9.3e-33
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 5 FDSEPDWN---EMEFLIKWKGQSHLHCQWKSF 33
F P W E + L ++ Q HLH + SF
Sbjct: 610 FKVVPYWGSPAERKILRQFWDQKHLHTRDASF 641
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 551 (199.0 bits), Expect = 1.2e-84, Sum P(2) = 1.2e-84
Identities = 117/278 (42%), Positives = 171/278 (61%)
Query: 167 EQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIP 226
+QP + GGK+R YQLEGL +L + W N ILADEMGLGKTVQ++S++ F + +
Sbjct: 192 QQPAPVTGGKMRKYQLEGLEWLKSLWMNGLCGILADEMGLGKTVQAISLIAFFKE-HNVS 250
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNT 286
GPFL+ PLST+SNW EF +W P + ++Y GTR R ++ +F N + P F
Sbjct: 251 GPFLISAPLSTVSNWVDEFARWTPGIKTVLYHGTRDERAQLRK-KFMNLRDQKSP-DFPV 308
Query: 287 LLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQN 346
+ T+YE+ + D+ L++ +W Y++VDE HRLKN +L L +++ N+LLITGTPLQN
Sbjct: 309 VCTSYEICMNDRKFLAQYQWRYIIVDEGHRLKNMNCRLIKELLSYNSANRLLITGTPLQN 368
Query: 347 SVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENE-------------LANLHMELRP 393
++ ELW+LLHFL + F + F QN+ + SS +N ++ +H L+P
Sbjct: 369 NITELWSLLHFLLPEIFNDLNSF-QNWFDFSSVLDNNGQTDMIERRKRTLVSTMHSILKP 427
Query: 394 HILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+LRR+ DVE +LP K E IL ++ QK Y+ IL
Sbjct: 428 FLLRRVKTDVESALPKKREYILYAPLTLEQKDLYREIL 465
Score = 378 (138.1 bits), Expect = 1.2e-84, Sum P(2) = 1.2e-84
Identities = 88/201 (43%), Positives = 122/201 (60%)
Query: 446 QVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRL 505
Q + N V++ + CN P F + D S D E ++ +SGK+++LD+L+ L
Sbjct: 586 QKKMQNPVMQARLACNSPHNFYWP---WAEDPSSID----ETLVTASGKMLLLDRLIPCL 638
Query: 506 HETKHRVLIFSQMVRMLDILAEYMSY-KGFQFQRLDGSTKAELRHQAMDHFNAPGSEDF- 563
H++LIFSQ LDIL ++ ++ + + R+DG+ R + FN +D+
Sbjct: 639 LNKGHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQIKAFNT--DKDYK 696
Query: 564 CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSV 623
FLLSTRAGG GINL ADTVI+FDSDWNPQ DLQA RAHRIGQ + V +YR T +V
Sbjct: 697 IFLLSTRAGGQGINLVAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPVIVYRLATKGTV 756
Query: 624 EEDILERAKKKMVLDHLVIQK 644
E+ +LE+A K L+ LVIQK
Sbjct: 757 EQTLLEKADSKRRLERLVIQK 777
Score = 39 (18.8 bits), Expect = 6.1e-49, Sum P(2) = 6.1e-49
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 622 SVEEDILERAKKKMVLDHLVIQKLN 646
S++E ++ + K ++LD L+ LN
Sbjct: 616 SIDETLVTASGKMLLLDRLIPCLLN 640
Score = 39 (18.8 bits), Expect = 6.1e-49, Sum P(2) = 6.1e-49
Identities = 22/86 (25%), Positives = 44/86 (51%)
Query: 1018 RKASKKGREKSENILNMPISRLKRDKKGKPGSAKVNF------QTTKD----RFH-KPQR 1066
R S K R S ++++ P ++ + PGS + QT KD F+ K ++
Sbjct: 490 RPRSLK-RSASSSVVSTPNKSVRSSRDSTPGSRASSTRRRKAPQTYKDISDREFNSKLRK 548
Query: 1067 VEQPLTKEEGEMSDNEEVYEQFKEVK 1092
+EQ L +E+ ++ ++ + EQ +E++
Sbjct: 549 LEQGL-EEDLDIEESIDESEQ-EEIE 572
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 817 (292.7 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
Identities = 178/412 (43%), Positives = 264/412 (64%)
Query: 283 KFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGT 342
+F+ LLTTYE+ LKD + L W+ L+VDEAHRLKN + L+ TLSEFS LL+TGT
Sbjct: 147 RFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGT 206
Query: 343 PLQNSVEELWALLHFLDHDKFKSK--DDFIQNYKNLSSFNENELANLHMELRPHILRRII 400
P+QNS++EL++LL F++ D F + +DF+Q Y+++ +E+ + L+ L+P +LRR+
Sbjct: 207 PIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESESA-SELYKLLQPFLLRRVK 265
Query: 401 KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCC 460
+V LP K E ++ MS LQK+YYK IL ++ D + +V L N++ +L+KC
Sbjct: 266 AEVATELPRKTEVVIYHGMSALQKKYYKAILMKDL-DAFENETAKKVKLQNVLSQLRKCV 324
Query: 461 NHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVR 520
+HP+LF+ + I D +I +SGKL +LDKLL L+ HRVL+FSQM +
Sbjct: 325 DHPYLFDGVEPE---PFEIGD-----HLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQ 376
Query: 521 MLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSED-FCFLLSTRAGGLGINLA 579
MLDIL +Y+ Y+G+ ++R+DGS + E RH A+ +F G + F FLLSTRAGG+G+NL
Sbjct: 377 MLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNF---GQQPIFTFLLSTRAGGVGMNLT 433
Query: 580 TADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDH 639
ADTVI FDSD+NPQNDLQA +RAHRIGQ + V + R + +VEE + +A K+ L +
Sbjct: 434 AADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTN 493
Query: 640 LVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRND--EESKKRLLG 689
+I+ + ++ +LS IL+FG ++L + + E K +LG
Sbjct: 494 TIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLSSEGSTMHEIDLKSILG 545
Score = 776 (278.2 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 170/414 (41%), Positives = 257/414 (62%)
Query: 148 GKMVDLQRK-KGKASLRKLDEQP--EW-LRGGKLRDYQLEGLNFLVNSWRNDTNVILADE 203
G ++ LQ K + +A ++ EQ +W L G LR YQL+G+N+L + IL DE
Sbjct: 15 GFLLALQSKSRAEAPRARVQEQDLRQWGLTGIHLRPYQLQGVNWLAQCFHCQNGCILGDE 74
Query: 204 MGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRAS 263
MGLGKT Q++++ +L GPFL++ PLS LSNW +E ++ P ++ + Y G +
Sbjct: 75 MGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDK 134
Query: 264 REVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQ 323
R QQ D K + +F+ LLTTYE+ LKD + L W+ L+VDEAHRLKN +
Sbjct: 135 RACLQQ-----DLK--QESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSL 187
Query: 324 LYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSK--DDFIQNYKNLSSFNE 381
L+ TLSEFS LL+TGTP+QNS++EL++LL F++ D F + +DF+Q Y+++ +E
Sbjct: 188 LHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESE 247
Query: 382 NELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKG 441
+ + L+ L+P +LRR+ +V LP K E ++ MS LQK+YYK IL ++ D +
Sbjct: 248 SA-SELYKLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDL-DAFEN 305
Query: 442 VRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKL 501
+V L N++ +L+KC +HP+LF+ + I D +I +SGKL +LDKL
Sbjct: 306 ETAKKVKLQNVLSQLRKCVDHPYLFDGVEPE---PFEIGD-----HLIEASGKLHLLDKL 357
Query: 502 LVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHF 555
L L+ HRVL+FSQM +MLDIL +Y+ Y+G+ ++R+DGS + E RH A+ +F
Sbjct: 358 LAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNF 411
Score = 60 (26.2 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 601 SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGN 660
S+ R +++VN+ + + K+ +E L R K + + LV EGS +RK+
Sbjct: 587 SKEDRESFEQLVNLQKTLLEKTSQEGRLLRNKGSVPIPGLV------EGSTKRKRILSPE 640
Query: 661 ELSAILRFGAEELFKEDRNDEESKKR 686
EL + E K R EE +K+
Sbjct: 641 ELEDRRKRRQEAAAKRKRLLEEKRKK 666
Score = 50 (22.7 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
Identities = 18/84 (21%), Positives = 37/84 (44%)
Query: 1018 RKASKKGREKSENILNMPIS---------RLKRDKKGKPGSAKVNFQTTKDRFHKPQRVE 1068
++ SK+ RE E ++N+ + RL R+K P V T + R P+ +E
Sbjct: 584 KEPSKEDRESFEQLVNLQKTLLEKTSQEGRLLRNKGSVPIPGLVEGSTKRKRILSPEELE 643
Query: 1069 QPLTKEEGEMSDNEEVYEQFKEVK 1092
+ + + + + E+ ++ K
Sbjct: 644 DRRKRRQEAAAKRKRLLEEKRKKK 667
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 544 (196.6 bits), Expect = 6.9e-83, Sum P(3) = 6.9e-83
Identities = 116/307 (37%), Positives = 186/307 (60%)
Query: 169 PEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGP 228
P LRG +LR+YQ GL++LV + N ILADEMGLGKT+Q++S+L L + GP
Sbjct: 618 PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGP 676
Query: 229 FLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLL 288
L++VP S + NW E ++W P+ ++ Y G + R++ +Q +P F+ +
Sbjct: 677 HLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQ-------GWTKPNAFHVCI 729
Query: 289 TTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
T+Y++VL+D + W YL++DEA +KN ++Q + +L F+++ +LL+TGTPLQNS+
Sbjct: 730 TSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSL 789
Query: 349 EELWALLHFLDHDKFKSKDDFIQNYKN-LSS-------FNENELANLHMELRPHILRRII 400
ELW+L+HFL F+S +F + + N L+ +NE + LH LRP +LRR+
Sbjct: 790 MELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVK 849
Query: 401 KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCC 460
DVEK +P K E ++R +S Q+ Y + + G+ +S++NI+++L+K C
Sbjct: 850 VDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLAT-GHFMSVINILMQLRKVC 908
Query: 461 NHPFLFE 467
NHP LF+
Sbjct: 909 NHPNLFD 915
Score = 403 (146.9 bits), Expect = 6.9e-83, Sum P(3) = 6.9e-83
Identities = 80/159 (50%), Positives = 108/159 (67%)
Query: 485 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK 544
L I GKL L LL +L HRVLIF+QM RMLD+L ++++Y G + RLDGST+
Sbjct: 2035 LRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTR 2094
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
E R M+ FNA FCF+LSTR+GG+G+NL ADTV+ +DSDWNP D QA R H
Sbjct: 2095 VEQRQALMERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCH 2153
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
RIGQ V+IYR ++ ++VEE+IL++A +K +L + I+
Sbjct: 2154 RIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIE 2192
Score = 47 (21.6 bits), Expect = 6.9e-83, Sum P(3) = 6.9e-83
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 121 WEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDY 180
WEK + A+ A E + E +AE RK+G SL++L + PE R DY
Sbjct: 89 WEKSHA-EIAEQAKHEAEI-ETRIAEL-------RKEGFWSLKRLPKVPEPPRPKGHWDY 139
Query: 181 QLEGLNFL 188
E + +L
Sbjct: 140 LCEEMQWL 147
Score = 43 (20.2 bits), Expect = 3.4e-45, Sum P(3) = 3.4e-45
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 877 SPDPKGPPLL 886
SP P GPPL+
Sbjct: 1060 SPSPAGPPLI 1069
Score = 40 (19.1 bits), Expect = 3.8e-82, Sum P(3) = 3.8e-82
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 29 QWKS--FAELQNLS-GF-KKVLNYAKKVVEDVRFRKMVSR--EEIELNDVSKEMDLDIIK 82
QW S FA+ + G +KV+ + E+ R ++ +R E+ +L ++ M D+ +
Sbjct: 145 QWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAKDVRQ 204
Query: 83 QNSQVERII 91
S VE+++
Sbjct: 205 FWSNVEKVV 213
Score = 39 (18.8 bits), Expect = 4.8e-82, Sum P(3) = 4.8e-82
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 11 WNEMEFLIKWKGQSHLHCQWKSFAEL 36
W+ +E ++++K QS L + K +L
Sbjct: 206 WSNVEKVVQFKQQSRLEEKRKKALDL 231
Score = 37 (18.1 bits), Expect = 2.9e-30, Sum P(2) = 2.9e-30
Identities = 22/88 (25%), Positives = 37/88 (42%)
Query: 11 WNEMEFLIKWKGQSHLHC-QWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIEL 69
W+ M FL+ QSH +W S + G ++ K + V ++ R ++
Sbjct: 793 WSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV-- 850
Query: 70 NDVSKEMDLDIIKQNSQVERIIADRISK 97
DV K+M + E +I R+SK
Sbjct: 851 -DVEKQMP-------KKYEHVIRCRLSK 870
Score = 37 (18.1 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 380 NENELANLHMELRPHILRRIIKDVEKSLPPKI 411
N+ E L +EL ++++ +SLPP++
Sbjct: 313 NDAETQRLEIELLRREGELPLEELLRSLPPQL 344
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 544 (196.6 bits), Expect = 1.1e-82, Sum P(4) = 1.1e-82
Identities = 116/307 (37%), Positives = 186/307 (60%)
Query: 169 PEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGP 228
P LRG +LR+YQ GL++LV + N ILADEMGLGKT+Q++S+L L + GP
Sbjct: 619 PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGP 677
Query: 229 FLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLL 288
L++VP S + NW E ++W P+ ++ Y G + R++ +Q +P F+ +
Sbjct: 678 HLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQ-------GWTKPNAFHVCI 730
Query: 289 TTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
T+Y++VL+D + W YL++DEA +KN ++Q + +L F+++ +LL+TGTPLQNS+
Sbjct: 731 TSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSL 790
Query: 349 EELWALLHFLDHDKFKSKDDFIQNYKN-LSS-------FNENELANLHMELRPHILRRII 400
ELW+L+HFL F+S +F + + N L+ +NE + LH LRP +LRR+
Sbjct: 791 MELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVK 850
Query: 401 KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCC 460
DVEK +P K E ++R +S Q+ Y + + G+ +S++NI+++L+K C
Sbjct: 851 VDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLAT-GHFMSVINILMQLRKVC 909
Query: 461 NHPFLFE 467
NHP LF+
Sbjct: 910 NHPNLFD 916
Score = 403 (146.9 bits), Expect = 1.1e-82, Sum P(4) = 1.1e-82
Identities = 80/159 (50%), Positives = 108/159 (67%)
Query: 485 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK 544
L I GKL L LL +L HRVLIF+QM RMLD+L ++++Y G + RLDGST+
Sbjct: 2046 LRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTR 2105
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
E R M+ FNA FCF+LSTR+GG+G+NL ADTV+ +DSDWNP D QA R H
Sbjct: 2106 VEQRQALMERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCH 2164
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
RIGQ V+IYR ++ ++VEE+IL++A +K +L + I+
Sbjct: 2165 RIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIE 2203
Score = 51 (23.0 bits), Expect = 1.1e-82, Sum P(4) = 1.1e-82
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRK 774
KP+ + AE A AP + + S E + P R +R+
Sbjct: 2700 KPQELVSAE-ATAPSTSSSATSTPEGSSPARPPRRR 2734
Score = 47 (21.6 bits), Expect = 1.1e-82, Sum P(4) = 1.1e-82
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 121 WEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDY 180
WEK + A+ A E + E +AE RK+G SL++L + PE R DY
Sbjct: 89 WEKSHA-EIAEQAKHEAEI-ETRIAEL-------RKEGFWSLKRLPKVPEPPRPKGHWDY 139
Query: 181 QLEGLNFL 188
E + +L
Sbjct: 140 LCEEMQWL 147
Score = 40 (19.1 bits), Expect = 6.0e-82, Sum P(4) = 6.0e-82
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 29 QWKS--FAELQNLS-GF-KKVLNYAKKVVEDVRFRKMVSR--EEIELNDVSKEMDLDIIK 82
QW S FA+ + G +KV+ + E+ R ++ +R E+ +L ++ M D+ +
Sbjct: 145 QWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASAMAKDVRQ 204
Query: 83 QNSQVERII 91
S VE+++
Sbjct: 205 FWSNVEKVV 213
Score = 39 (18.8 bits), Expect = 7.6e-82, Sum P(4) = 7.6e-82
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 11 WNEMEFLIKWKGQSHLHCQWKSFAEL 36
W+ +E ++++K QS L + K +L
Sbjct: 206 WSNVEKVVQFKQQSRLEEKRKKALDL 231
Score = 38 (18.4 bits), Expect = 2.5e-81, Sum P(4) = 2.5e-81
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 1214 KLKQERQEEAGIGPSHINGSASGS 1237
+L QE +E G G G+ GS
Sbjct: 2366 RLPQEEEEGPGAGDEVSCGTGGGS 2389
Score = 37 (18.1 bits), Expect = 7.2e-30, Sum P(3) = 7.2e-30
Identities = 22/88 (25%), Positives = 37/88 (42%)
Query: 11 WNEMEFLIKWKGQSHLHC-QWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIEL 69
W+ M FL+ QSH +W S + G ++ K + V ++ R ++
Sbjct: 794 WSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV-- 851
Query: 70 NDVSKEMDLDIIKQNSQVERIIADRISK 97
DV K+M + E +I R+SK
Sbjct: 852 -DVEKQMP-------KKYEHVIRCRLSK 871
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 535 (193.4 bits), Expect = 1.3e-82, Sum P(3) = 1.3e-82
Identities = 138/410 (33%), Positives = 225/410 (54%)
Query: 43 KKVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVERIIADRISK---DS 99
K+ + AKK E+ ++ + L E+ I + + + + +S +S
Sbjct: 559 KEAMEQAKKEEEEKESKRQAKKLNFLLTQT--ELYSHFIGRKIKTNELEGNNVSSNDSES 616
Query: 100 SGNVTQEYLVKWKGLSYA-EATWEKDEII-----DFAQDAIDEYKAR-----EAAMA-EQ 147
N+ L K +A + E DE + + A +A+ E +A+ + A A E+
Sbjct: 617 QKNIDISALAPNKNDFHAIDFDNENDEQLRLRAAENASNALAETRAKAKQFDDHANAHEE 676
Query: 148 GKMVDLQRKKGKASLRKLD-EQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGL 206
+ D + SL ++ EQP+ L L++YQL+GLN+L N + N ILADEMGL
Sbjct: 677 EEEEDELNFQNPTSLGEITIEQPKIL-ACTLKEYQLKGLNWLANLYDQGINGILADEMGL 735
Query: 207 GKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREV 266
GKTVQS+S+L L I GPFLVV P STL NW E K+LP ++ Y G R+V
Sbjct: 736 GKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKV 795
Query: 267 CQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYT 326
+++ + + + F+ ++T+Y++V+ D L K+KW Y+++DEA +K+S++ +
Sbjct: 796 LRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWK 855
Query: 327 TLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNY-KNLSS------- 378
L F +N+LL+TGTP+QNS++ELWALLHF+ F S D+F + + K++ S
Sbjct: 856 NLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTK 915
Query: 379 FNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
N+ +L LHM L+P +LRR+ K+V+ L KIE + +++ Q + Y+
Sbjct: 916 LNQQQLRRLHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQ 965
Score = 390 (142.3 bits), Expect = 1.3e-82, Sum P(3) = 1.3e-82
Identities = 84/192 (43%), Positives = 120/192 (62%)
Query: 485 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK 544
++R I S KL LD+LLV+L HRVLI+ QM +M+D++ EY++Y+ + RLDGS+K
Sbjct: 1291 MDRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSK 1350
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
E R + + E F FLLSTRAGGLGINL ADTVI +DSDWNP D QAM RAH
Sbjct: 1351 LEDRRDLVHDWQT-NPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAH 1409
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSA 664
R+GQ V +YR + ++EE + +RAK+K + +V++ E + K G S
Sbjct: 1410 RLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQEKNI--KTIEVGENDSE 1467
Query: 665 ILRFGAEELFKE 676
+ R G++ + ++
Sbjct: 1468 VTREGSKSISQD 1479
Score = 148 (57.2 bits), Expect = 5.7e-42, Sum P(4) = 5.7e-42
Identities = 47/161 (29%), Positives = 80/161 (49%)
Query: 357 FLDHDKFK---SKDDFIQNYKNLSS-FNENELANLHMELRPHILRRIIKDVEKSLPPKIE 412
F HD+F SKD I+++ ++ N+ +L LHM L+P +LRR+ K+V+ L KIE
Sbjct: 892 FDSHDEFNEWFSKD--IESHAEANTKLNQQQLRRLHMILKPFMLRRVKKNVQSELGDKIE 949
Query: 413 RILRVEMSPLQKQYYKWI---LERNFHDLNKGVR-----------GNQVSLLNIVVELKK 458
+ +++ Q + Y+ + + N+ + G+ +L+N V++ +K
Sbjct: 950 IDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDSTSNSASNSGSDQNLINAVMQFRK 1009
Query: 459 CCNHPFLFESAD--HGYGGDTSINDTSKLERIILSSGKLVI 497
CNHP LFE AD + T TS L + ++ VI
Sbjct: 1010 VCNHPDLFERADVDSPFSFTTFGKTTSMLTASVANNNSSVI 1050
Score = 82 (33.9 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 47/218 (21%), Positives = 88/218 (40%)
Query: 444 GNQVSLLNIVVELKKCCNHPFLFESADHG-------YGGDTSINDTSKLER--IILSSGK 494
G+ +L+N V++ +K CNHP LFE AD +G TS+ S ++S+
Sbjct: 995 GSDQNLINAVMQFRKVCNHPDLFERADVDSPFSFTTFGKTTSMLTASVANNNSSVISNSN 1054
Query: 495 LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKA--ELRHQAM 552
+ + + K LI+S + L + Y+ + +L++
Sbjct: 1055 MNLSSMSSNNISNGKFTDLIYSSRNPIKYSLPRLI-YEDLILPNYNNDVDIANKLKNVKF 1113
Query: 553 DHFNAPGSEDFCFLLSTRAGGLGIN--LATADTVI---IFDSDWNPQNDLQAMSRAHRIG 607
+ FN + + C LS G +N + T + + + P+N S + +
Sbjct: 1114 NIFNPSTNYELCLFLSKLTGEPSLNEFFRVSTTPLLKRVIERTNGPKN---TDSLSFKTI 1170
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLDHL-VIQK 644
QE++ + R S+ V +L K ++L IQ+
Sbjct: 1171 TQELLEVTRNAPSEGVMASLLNVEKHAYEREYLNCIQR 1208
Score = 53 (23.7 bits), Expect = 5.7e-42, Sum P(4) = 5.7e-42
Identities = 20/88 (22%), Positives = 39/88 (44%)
Query: 112 KGLSYAEATWEKDEIIDF-AQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+G+ W+K+E + + I++ +A E+ K Q KK L + +
Sbjct: 534 RGIREMSNFWKKNEREERDLKKKIEKEAMEQAKKEEEEKESKRQAKKLNFLLTQTELYSH 593
Query: 171 WLRGGKLRDYQLEGLNFLVNSWRNDTNV 198
++ G K++ +LEG N N + N+
Sbjct: 594 FI-GRKIKTNELEGNNVSSNDSESQKNI 620
Score = 52 (23.4 bits), Expect = 1.3e-82, Sum P(3) = 1.3e-82
Identities = 17/75 (22%), Positives = 34/75 (45%)
Query: 5 FDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSR 64
FD+ D ++ F ++ S ++ +W + +N + ++N K ED
Sbjct: 96 FDNTNDSQDLHFKKLYRDMSMINKEWAEYQSFKN-ANLSDIIN-EKDADEDEE------D 147
Query: 65 EEIELNDVSKEMDLD 79
+E EL D ++M+ D
Sbjct: 148 DEDELEDGEEDMEED 162
Score = 49 (22.3 bits), Expect = 3.3e-29, Sum P(4) = 3.3e-29
Identities = 11/46 (23%), Positives = 26/46 (56%)
Query: 345 QNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHME 390
++S+E+L+ F++ +F+ ++ Q K+ N N+ +LH +
Sbjct: 63 RDSIEQLYQDWKFINLQEFELISEWNQQSKDWQFDNTNDSQDLHFK 108
Score = 44 (20.5 bits), Expect = 2.9e-31, Sum P(4) = 2.9e-31
Identities = 18/79 (22%), Positives = 34/79 (43%)
Query: 264 REVCQQYEFYNDKKVGRPIKFNTL-----LTTYEVVLKDKAVLSKIKWNYLMVDEAHRLK 318
R+VC + + V P F T + T V + +V+S N L ++ +
Sbjct: 1008 RKVCNHPDLFERADVDSPFSFTTFGKTTSMLTASVANNNSSVISNSNMN-LSSMSSNNIS 1066
Query: 319 NSEAQLYTTLSEFSTKNKL 337
N + +T L +S++N +
Sbjct: 1067 NGK---FTDLI-YSSRNPI 1081
Score = 41 (19.5 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
Identities = 22/98 (22%), Positives = 46/98 (46%)
Query: 1 MSHLFDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRK 60
M LFDS ++NE W + +S AE N ++ L +++ R+
Sbjct: 888 MPSLFDSHDEFNE------WFSKDI-----ESHAEA-NTKLNQQQLRRLHMILKPFMLRR 935
Query: 61 MVSREEIELNDVSKEMDL--DIIKQNSQVERIIADRIS 96
+ + EL D E+D+ D+ ++ +++ +++ +IS
Sbjct: 936 VKKNVQSELGD-KIEIDVLCDLTQRQAKLYQVLKSQIS 972
Score = 41 (19.5 bits), Expect = 3.3e-29, Sum P(4) = 3.3e-29
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 392 RPHILRRIIKDVEKSLPPKIER 413
RP I+R +IK K+ KI++
Sbjct: 332 RPKIVRELIKMCNKNKHQKIKK 353
Score = 39 (18.8 bits), Expect = 1.2e-40, Sum P(4) = 1.2e-40
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 61 MVSREEIELNDVSKEMDLDIIKQNSQVERIIAD 93
++++E+ +++D SK K+NS+ ER+ AD
Sbjct: 6 LLNKEDKDISDFSKTTAGKSAKKNSR-ERV-AD 36
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 787 (282.1 bits), Expect = 6.9e-82, Sum P(3) = 6.9e-82
Identities = 194/526 (36%), Positives = 296/526 (56%)
Query: 283 KFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGT 342
+F+ LLTTYE+ LKD L KW L+VDEAHRLKN E+ L+ TL EF+ ++L+TGT
Sbjct: 134 RFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGT 193
Query: 343 PLQNSVEELWALLHFLDHDKF--KSKDDFIQNYKNLSSFNENELAN-LHMELRPHILRRI 399
P+QN+++E+++LL F+ F ++ +DF+ Y ++ + E L + LH L+P +LRR+
Sbjct: 194 PIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYADIQT--EPALVDELHQVLQPFLLRRV 251
Query: 400 IKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKC 459
+V LP K E ++ +S LQK+YYK IL R+ D + + + LLN++++L+KC
Sbjct: 252 KAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDL-DAFRTDQSTKTRLLNVLMQLRKC 310
Query: 460 CNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMV 519
+HP+LF+ + E ++ +SGKL +LD +L L E H VL+FSQM
Sbjct: 311 VDHPYLFDGVEP--------EPFEMGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMT 362
Query: 520 RMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLA 579
RMLDIL +Y+ Y+G+ ++RLDGS + E R+ A+ +F+ + F FLLST+AGG+G+NL
Sbjct: 363 RMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFST--KDVFIFLLSTKAGGVGMNLT 420
Query: 580 TADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDH 639
ADTVI D D+NPQNDLQA +RAHRIGQ V + R + ++EE I RA K+ L
Sbjct: 421 AADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTD 480
Query: 640 LVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEESK--KRLLGMDIDXXXX 697
VI++ + + G +LS IL+FG ++L + + + + +LG D
Sbjct: 481 TVIEEGRFSLLDQAQSAASGLQLSEILKFGVDKLLSSEESSVQDVDLQLILGQSRDGQWL 540
Query: 698 XXXXXXXXXXXXXXXXXXXSA------FKVANFC---GAEDDGSFWSRWIKPEAVAQAED 748
F+ ++ AED+ +F + + A+ ED
Sbjct: 541 TDEEHAKLNESNEEEDEDMEGQNHMYYFEGKDYSKDPSAEDEKTF--ELLLEKQFAEMED 598
Query: 749 ALAP-RAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKA 793
A RA RN K+ + P + RKK+ E +ER KR+ A
Sbjct: 599 AEKEGRALRN-KAGVSLSGPLINPARKKRPLTEAELEERRQKRQAA 643
Score = 743 (266.6 bits), Expect = 2.9e-73, Sum P(3) = 2.9e-73
Identities = 162/405 (40%), Positives = 253/405 (62%)
Query: 156 KKGKASLRKLDEQPEWLRGG-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVS 214
+K K+ L + D + +W G LR YQL+G+ +L +N IL DEMGLGKT Q++S
Sbjct: 14 EKDKSELTENDLK-KWGLGAIHLRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTIS 72
Query: 215 MLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYN 274
+L + + + ++ GPFLV+ PL+ L NW +E ++ P+++VI Y G + R QQ +
Sbjct: 73 LLAYARGSLKMNGPFLVLCPLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQ-NLKS 131
Query: 275 DKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTK 334
D P +F+ LLTTYE+ LKD L KW L+VDEAHRLKN E+ L+ TL EF+
Sbjct: 132 D-----P-RFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVG 185
Query: 335 NKLLITGTPLQNSVEELWALLHFLDHDKF--KSKDDFIQNYKNLSSFNENELAN-LHMEL 391
++L+TGTP+QN+++E+++LL F+ F ++ +DF+ Y ++ + E L + LH L
Sbjct: 186 FRVLLTGTPIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYADIQT--EPALVDELHQVL 243
Query: 392 RPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLN 451
+P +LRR+ +V LP K E ++ +S LQK+YYK IL R+ D + + + LLN
Sbjct: 244 QPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDL-DAFRTDQSTKTRLLN 302
Query: 452 IVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHR 511
++++L+KC +HP+LF+ + E ++ +SGKL +LD +L L E H
Sbjct: 303 VLMQLRKCVDHPYLFDGVEP--------EPFEMGEHLVEASGKLSLLDSMLAYLQEGGHH 354
Query: 512 VLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFN 556
VL+FSQM RMLDIL +Y+ Y+G+ ++RLDGS + E R+ A+ +F+
Sbjct: 355 VLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFS 399
Score = 52 (23.4 bits), Expect = 6.9e-82, Sum P(3) = 6.9e-82
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 909 AKRISRYEDPIKQFRVLSYLKPSNWSKGCGW 939
AKR E+ KQ L+Y K W CG+
Sbjct: 645 AKRAKLQEERKKQQEELNYKKKMAWWDSCGY 675
Score = 43 (20.2 bits), Expect = 6.0e-81, Sum P(3) = 6.0e-81
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 755 ARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFS 796
AR + EA ER KR+ ++ + QE K+++ E +
Sbjct: 622 ARKKRPLTEAELEERRQKRQAAAAKRAKLQEE-RKKQQEELN 662
Score = 39 (18.8 bits), Expect = 6.9e-82, Sum P(3) = 6.9e-82
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 89 RIIADRISKDSSGNVTQEYLVKWKGL 114
R + D I + +T+ L KW GL
Sbjct: 6 RAVRDNIPEKDKSELTENDLKKW-GL 30
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 815 (292.0 bits), Expect = 9.7e-82, Sum P(2) = 9.7e-82
Identities = 179/411 (43%), Positives = 262/411 (63%)
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 343
F+ LLTTYE+ LKD + L W+ L VDEAHRLKN + L+ TLSEFS +LL+TGTP
Sbjct: 140 FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSVVFRLLLTGTP 199
Query: 344 LQNSVEELWALLHFLDHDKF--KSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIK 401
+QNS++EL++LL ++ D F + +DF+Q Y+++ +++ + LH LRP +LRR+
Sbjct: 200 IQNSLQELYSLLSVVEPDLFCREQVEDFVQCYQDIEKESKSA-SELHRLLRPFLLRRVKA 258
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCN 461
V LP K E ++ MS LQK+YYK IL ++ D + +V L N++ +L+KC +
Sbjct: 259 QVATELPKKTEVVIYHGMSALQKKYYKAILMKDL-DAFENETAKKVKLQNVLTQLRKCVD 317
Query: 462 HPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRM 521
HP+LF+ G + + E +I +SGKL +LD+LL L+ HRVL+FSQM M
Sbjct: 318 HPYLFD------GVEPEPFEVG--EHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHM 369
Query: 522 LDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSED-FCFLLSTRAGGLGINLAT 580
LDIL +YM Y+G+ ++R+DGS + E RH A+ +F G + F FLLSTRAGG+G+NL
Sbjct: 370 LDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF---GKQPIFVFLLSTRAGGVGMNLTA 426
Query: 581 ADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHL 640
ADTVI DSD+NPQNDLQA +RAHRIGQ + V + R + +VEE + +A K+ L ++
Sbjct: 427 ADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNM 486
Query: 641 VIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRN--DEESKKRLLG 689
VI+ + ++ +LS IL+FG ++L + + DE K +LG
Sbjct: 487 VIEGGHFTLGAQKPAAEADLQLSEILKFGLDKLLSSEGSSMDEIDLKSILG 537
Score = 769 (275.8 bits), Expect = 3.4e-77, Sum P(2) = 3.4e-77
Identities = 168/397 (42%), Positives = 248/397 (62%)
Query: 164 KLDEQP--EW-LRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQ 220
++ EQ EW L G +LR YQLEG+N+LV + IL DEMGLGKT Q++++L +L
Sbjct: 24 RVQEQDLQEWGLTGIRLRSYQLEGVNWLVQCFHGQNGCILGDEMGLGKTCQTIALLIYLV 83
Query: 221 NAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGR 280
GPFL++ PLS LSNW +E ++ P ++ + Y G + R QQ D + +
Sbjct: 84 GRLNDEGPFLILCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARRQQ-----DLR--Q 136
Query: 281 PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLIT 340
F+ LLTTYE+ LKD + L W+ L VDEAHRLKN + L+ TLSEFS +LL+T
Sbjct: 137 ESGFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSVVFRLLLT 196
Query: 341 GTPLQNSVEELWALLHFLDHDKF--KSKDDFIQNYKNLSSFNENELANLHMELRPHILRR 398
GTP+QNS++EL++LL ++ D F + +DF+Q Y+++ +++ + LH LRP +LRR
Sbjct: 197 GTPIQNSLQELYSLLSVVEPDLFCREQVEDFVQCYQDIEKESKSA-SELHRLLRPFLLRR 255
Query: 399 IIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKK 458
+ V LP K E ++ MS LQK+YYK IL ++ D + +V L N++ +L+K
Sbjct: 256 VKAQVATELPKKTEVVIYHGMSALQKKYYKAILMKDL-DAFENETAKKVKLQNVLTQLRK 314
Query: 459 CCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQM 518
C +HP+LF+ G + + E +I +SGKL +LD+LL L+ HRVL+FSQM
Sbjct: 315 CVDHPYLFD------GVEPEPFEVG--EHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQM 366
Query: 519 VRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHF 555
MLDIL +YM Y+G+ ++R+DGS + E RH A+ +F
Sbjct: 367 THMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF 403
Score = 44 (20.5 bits), Expect = 3.4e-77, Sum P(2) = 3.4e-77
Identities = 22/85 (25%), Positives = 36/85 (42%)
Query: 601 SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGN 660
S+ R +++VN+ + + K+ R K +++ L AEG +RKK
Sbjct: 588 SKEDRKSFEQLVNLQKTLLEKTSHGGRSLRNKGSVLIPGL------AEGPIKRKKILSPE 641
Query: 661 ELSAILRFGAEELFKEDRNDEESKK 685
EL + E K + EE KK
Sbjct: 642 ELEDRQKKRQEAAAKRKKLMEEKKK 666
Score = 39 (18.8 bits), Expect = 9.7e-82, Sum P(2) = 9.7e-82
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRK 792
E + KRKK E ++ +E R+K
Sbjct: 652 EAAAKRKKLMEEKKKAKEEAEHRKK 676
Score = 37 (18.1 bits), Expect = 1.6e-81, Sum P(2) = 1.6e-81
Identities = 19/73 (26%), Positives = 27/73 (36%)
Query: 1058 KDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWME------WCEDVMADEIRTLQRL 1111
+DR K Q K E +E E K++ W E +C E+ L+ L
Sbjct: 644 EDRQKKRQEAAAKRKKLMEEKKKAKEEAEHRKKMAWWESNGYQSFCLPSEDSELEDLEDL 703
Query: 1112 QRLQATSDNLPKE 1124
+ TS L E
Sbjct: 704 EDGDETSAELDYE 716
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 544 (196.6 bits), Expect = 1.2e-81, Sum P(4) = 1.2e-81
Identities = 116/307 (37%), Positives = 186/307 (60%)
Query: 169 PEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGP 228
P LRG +LR+YQ GL++LV + N ILADEMGLGKT+Q++S+L L + GP
Sbjct: 611 PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGP 669
Query: 229 FLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLL 288
L++VP S + NW E ++W P+ ++ Y G + R++ +Q +P F+ +
Sbjct: 670 HLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQ-------GWTKPNAFHVCI 722
Query: 289 TTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
T+Y++VL+D + W YL++DEA +KN ++Q + +L F+++ +LL+TGTPLQNS+
Sbjct: 723 TSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSL 782
Query: 349 EELWALLHFLDHDKFKSKDDFIQNYKN-LSS-------FNENELANLHMELRPHILRRII 400
ELW+L+HFL F+S +F + + N L+ +NE + LH LRP +LRR+
Sbjct: 783 MELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVK 842
Query: 401 KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCC 460
DVEK +P K E ++R +S Q+ Y + + G+ +S++NI+++L+K C
Sbjct: 843 VDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLAT-GHFMSVINILMQLRKVC 901
Query: 461 NHPFLFE 467
NHP LF+
Sbjct: 902 NHPNLFD 908
Score = 403 (146.9 bits), Expect = 1.2e-81, Sum P(4) = 1.2e-81
Identities = 80/159 (50%), Positives = 108/159 (67%)
Query: 485 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK 544
L I GKL L LL +L HRVLIF+QM RMLD+L ++++Y G + RLDGST+
Sbjct: 2035 LRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTR 2094
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
E R M+ FNA FCF+LSTR+GG+G+NL ADTV+ +DSDWNP D QA R H
Sbjct: 2095 VEQRQALMERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCH 2153
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
RIGQ V+IYR ++ ++VEE+IL++A +K +L + I+
Sbjct: 2154 RIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIE 2192
Score = 47 (21.6 bits), Expect = 1.2e-81, Sum P(4) = 1.2e-81
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 121 WEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDY 180
WEK + A+ A E + E +AE RK+G SL++L + PE R DY
Sbjct: 89 WEKSHA-EIAEQAKHEAEI-ETRIAEL-------RKEGFWSLKRLPKVPEPPRPKGHWDY 139
Query: 181 QLEGLNFL 188
E + +L
Sbjct: 140 LCEEMQWL 147
Score = 41 (19.5 bits), Expect = 1.2e-81, Sum P(4) = 1.2e-81
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 740 PEAVAQAEDALAPRAARNTKSYAEANEPERSNKR----KKKGSELQEPQERVHKRRKAEF 795
P V+++ P +A + + E E +R+++ K S ++PQE V AE
Sbjct: 2643 PLCVSESNGLELPPSAASDEPLQEPLEADRTSEELTEAKTPTSSPEKPQELV----TAEV 2698
Query: 796 SVPS 799
+ PS
Sbjct: 2699 AAPS 2702
Score = 40 (19.1 bits), Expect = 8.4e-80, Sum P(5) = 8.4e-80
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 29 QWKS--FAELQNLS-GF-KKVLNYAKKVVEDVRFRKMVSR--EEIELNDVSKEMDLDIIK 82
QW S FA+ + G +KV+ + E+ R ++ +R E+ +L ++ M D+ +
Sbjct: 145 QWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAKDVRQ 204
Query: 83 QNSQVERII 91
S VE+++
Sbjct: 205 FWSNVEKVV 213
Score = 39 (18.8 bits), Expect = 8.4e-80, Sum P(5) = 8.4e-80
Identities = 10/54 (18%), Positives = 27/54 (50%)
Query: 118 EATWEKDEIIDFAQDAIDEY-KAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+++ + D + D ++D DE+ + E + + + + + + S + DE+ E
Sbjct: 492 DSSSQSDSVEDRSEDEEDEHSEEEETSGSSASEESESEESEDAQSQSQADEEEE 545
Score = 39 (18.8 bits), Expect = 1.1e-79, Sum P(5) = 1.1e-79
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 11 WNEMEFLIKWKGQSHLHCQWKSFAEL 36
W+ +E ++++K QS L + K +L
Sbjct: 206 WSNVEKVVQFKQQSRLEEKRKKALDL 231
Score = 38 (18.4 bits), Expect = 1.5e-28, Sum P(4) = 1.5e-28
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 221 NAQQIPGPFLVVVPLSTL 238
+AQ PGP V+P S +
Sbjct: 1033 SAQPTPGPVPQVLPASLM 1050
Score = 38 (18.4 bits), Expect = 1.5e-28, Sum P(4) = 1.5e-28
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 219 LQNAQQIPGPFLVVVPLST 237
L +A +P P V+ P ST
Sbjct: 1642 LASASPVPAPTPVLAPSST 1660
Score = 37 (18.1 bits), Expect = 3.2e-81, Sum P(4) = 3.2e-81
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 1214 KLKQERQEEAGIGPSHINGSASGS 1237
+L QE +E G G G+ G+
Sbjct: 2355 RLPQEEEEGPGAGDESSCGTGGGT 2378
Score = 37 (18.1 bits), Expect = 1.6e-27, Sum P(4) = 1.6e-27
Identities = 22/88 (25%), Positives = 37/88 (42%)
Query: 11 WNEMEFLIKWKGQSHLHC-QWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIEL 69
W+ M FL+ QSH +W S + G ++ K + V ++ R ++
Sbjct: 786 WSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV-- 843
Query: 70 NDVSKEMDLDIIKQNSQVERIIADRISK 97
DV K+M + E +I R+SK
Sbjct: 844 -DVEKQMP-------KKYEHVIRCRLSK 863
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 810 (290.2 bits), Expect = 2.1e-81, Sum P(2) = 2.1e-81
Identities = 179/411 (43%), Positives = 260/411 (63%)
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 343
F+ LLTTYE+ LKD + L W+ L VDEAHRLKN + L+ TLSEFS +LL+TGTP
Sbjct: 140 FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTP 199
Query: 344 LQNSVEELWALLHFLDHDKF--KSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIK 401
+QNS+ EL++LL ++ D F + +DF+Q Y+++ +++ + LH L+P +LRR+
Sbjct: 200 IQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSA-SELHRLLQPFLLRRVKA 258
Query: 402 DVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCN 461
V LP K E ++ MS LQK+YYK IL ++ D + +V L NI+ +L+KC +
Sbjct: 259 QVATELPKKTEVVVYHGMSALQKKYYKAILMKDL-DAFENETAKKVKLQNILTQLRKCVD 317
Query: 462 HPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRM 521
HP+LF+ G + + E +I +SGKL +LD+LL L+ HRVL+FSQM M
Sbjct: 318 HPYLFD------GVEPEPFEVG--EHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHM 369
Query: 522 LDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHF-NAPGSEDFCFLLSTRAGGLGINLAT 580
LDIL +YM Y+G+ ++R+DGS + E RH A+ +F N P F FLLSTRAGG+G+NL
Sbjct: 370 LDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQP---IFVFLLSTRAGGVGMNLTA 426
Query: 581 ADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHL 640
ADTVI DSD+NPQNDLQA +RAHRIGQ + V + R + +VEE + +A K+ L ++
Sbjct: 427 ADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNM 486
Query: 641 VIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKEDRNDEES--KKRLLG 689
VI+ + ++ +LS IL+FG ++L + + E K +LG
Sbjct: 487 VIEGGHFTPGAQKPSAEADFQLSEILKFGLDKLLSSEGSSMEDIDLKSILG 537
Score = 769 (275.8 bits), Expect = 2.7e-77, Sum P(2) = 2.7e-77
Identities = 173/413 (41%), Positives = 253/413 (61%)
Query: 153 LQRKKGKASLRKLDEQPE---W-LRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGK 208
L + G LR ++P+ W L G +LR YQLEG+N+LV + IL DEMGLGK
Sbjct: 12 LPAEHGPEPLRTRVQEPDLQQWGLTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGK 71
Query: 209 TVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQ 268
T Q++++L +L GPFLV+ PLS LSNW +E ++ P ++ + Y G + R Q
Sbjct: 72 TCQTIALLIYLVGRLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQ 131
Query: 269 QYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTL 328
Q D + + F+ LLTTYE+ LKD + L W+ L VDEAHRLKN + L+ TL
Sbjct: 132 Q-----DLR--QESGFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTL 184
Query: 329 SEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKF--KSKDDFIQNYKNLSSFNENELAN 386
SEFS +LL+TGTP+QNS+ EL++LL ++ D F + +DF+Q Y+++ +++ +
Sbjct: 185 SEFSAVFRLLLTGTPIQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSA-SE 243
Query: 387 LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQ 446
LH L+P +LRR+ V LP K E ++ MS LQK+YYK IL ++ D + +
Sbjct: 244 LHRLLQPFLLRRVKAQVATELPKKTEVVVYHGMSALQKKYYKAILMKDL-DAFENETAKK 302
Query: 447 VSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLH 506
V L NI+ +L+KC +HP+LF+ G + + E +I +SGKL +LD+LL L+
Sbjct: 303 VKLQNILTQLRKCVDHPYLFD------GVEPEPFEVG--EHLIEASGKLHLLDRLLAFLY 354
Query: 507 ETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHF-NAP 558
HRVL+FSQM MLDIL +YM Y+G+ ++R+DGS + E RH A+ +F N P
Sbjct: 355 SGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQP 407
Score = 45 (20.9 bits), Expect = 2.7e-77, Sum P(2) = 2.7e-77
Identities = 22/85 (25%), Positives = 36/85 (42%)
Query: 601 SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGN 660
S+ R +++VN+ + + K+ R K +++ L AEG +RKK
Sbjct: 590 SKEDRKSFEQLVNLQKTLLEKTSHGGRTLRNKGSVLIPGL------AEGPIKRKKILSPE 643
Query: 661 ELSAILRFGAEELFKEDRNDEESKK 685
EL + E K R EE +K
Sbjct: 644 ELEDRRKKRQEAAAKRKRLMEEKRK 668
Score = 41 (19.5 bits), Expect = 2.1e-81, Sum P(2) = 2.1e-81
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 750 LAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
L P A + PE R+KK E ++R+ + ++ E
Sbjct: 625 LIPGLAEGPIKRKKILSPEELEDRRKKRQEAAAKRKRLMEEKRKE 669
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 544 (196.6 bits), Expect = 2.3e-81, Sum P(4) = 2.3e-81
Identities = 116/307 (37%), Positives = 186/307 (60%)
Query: 169 PEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGP 228
P LRG +LR+YQ GL++LV + N ILADEMGLGKT+Q++S+L L + GP
Sbjct: 621 PLLLRG-QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGP 679
Query: 229 FLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLL 288
L++VP S + NW E ++W P+ ++ Y G + R++ +Q +P F+ +
Sbjct: 680 HLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQ-------GWTKPNAFHVCI 732
Query: 289 TTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
T+Y++VL+D + W YL++DEA +KN ++Q + +L F+++ +LL+TGTPLQNS+
Sbjct: 733 TSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSL 792
Query: 349 EELWALLHFLDHDKFKSKDDFIQNYKN-LSS-------FNENELANLHMELRPHILRRII 400
ELW+L+HFL F+S +F + + N L+ +NE + LH LRP +LRR+
Sbjct: 793 MELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVK 852
Query: 401 KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCC 460
DVEK +P K E ++R +S Q+ Y + + G+ +S++NI+++L+K C
Sbjct: 853 VDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLAT-GHFMSVINILMQLRKVC 911
Query: 461 NHPFLFE 467
NHP LF+
Sbjct: 912 NHPNLFD 918
Score = 403 (146.9 bits), Expect = 2.3e-81, Sum P(4) = 2.3e-81
Identities = 78/152 (51%), Positives = 107/152 (70%)
Query: 492 SGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQA 551
+GKL L LL +L HRVLIF+QM RMLD+L ++++Y G + RLDGST+ E R
Sbjct: 2030 AGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQAL 2089
Query: 552 MDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV 611
M+ FNA FCF+LSTR+GG+G+NL ADTV+ +DSDWNP D QA R HRIGQ
Sbjct: 2090 MERFNAD-KRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 2148
Query: 612 VNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
V+IYR ++ ++VEE+IL++A +K +L + I+
Sbjct: 2149 VHIYRLISERTVEENILKKANQKRMLGDMAIE 2180
Score = 47 (21.6 bits), Expect = 2.3e-81, Sum P(4) = 2.3e-81
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 121 WEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDY 180
WEK + A+ A E + E +AE RK+G SL++L + PE R DY
Sbjct: 89 WEKSHA-EIAEQAKHEAEI-ETRIAEL-------RKEGFWSLKRLPKVPEPPRPKGHWDY 139
Query: 181 QLEGLNFL 188
E + +L
Sbjct: 140 LCEEMQWL 147
Score = 47 (21.6 bits), Expect = 3.3e-43, Sum P(5) = 3.3e-43
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 618 VTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED 677
V+S EE+ +K+ +L+ + + + E R Q K +++ + F E F
Sbjct: 2210 VSSVPEEEEETVASKQTHILEQALCRAEDEEDI-RAATQAKAEQVAELAEFNENEGFPAG 2268
Query: 678 RNDEESK 684
+E S+
Sbjct: 2269 EGEEASR 2275
Score = 44 (20.5 bits), Expect = 4.8e-80, Sum P(5) = 4.8e-80
Identities = 10/53 (18%), Positives = 25/53 (47%)
Query: 118 EATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPE 170
+++ + D + ++D DE+ E + + Q + + + S + DE+ E
Sbjct: 496 DSSSQSDSAEEHSEDEEDEHSEEEMSGSSQSEESESDESEDAQSQSQADEEQE 548
Score = 40 (19.1 bits), Expect = 4.8e-80, Sum P(5) = 4.8e-80
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 29 QWKS--FAELQNLS-GF-KKVLNYAKKVVEDVRFRKMVSR--EEIELNDVSKEMDLDIIK 82
QW S FA+ + G +KV+ + E+ R ++ +R E+ +L ++ M D+ +
Sbjct: 145 QWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREEQAKLRRIASTMAKDVRQ 204
Query: 83 QNSQVERII 91
S VE+++
Sbjct: 205 FWSNVEKVV 213
Score = 39 (18.8 bits), Expect = 6.0e-80, Sum P(5) = 6.0e-80
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 11 WNEMEFLIKWKGQSHLHCQWKSFAEL 36
W+ +E ++++K QS L + K +L
Sbjct: 206 WSNVEKVVQFKQQSRLEEKRKKALDL 231
Score = 39 (18.8 bits), Expect = 2.2e-28, Sum P(4) = 2.2e-28
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 380 NENELANLHMELRPHILRRIIKDVEKSLPPKI 411
N+ E +EL H ++++ +SLPP++
Sbjct: 314 NDAETQRREIELLRHEGELPLEELLRSLPPQL 345
Score = 38 (18.4 bits), Expect = 2.3e-81, Sum P(4) = 2.3e-81
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 782 EPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLS 819
E +E V +RR + VP + SA R S ++S
Sbjct: 2720 EEKELVKRRRHRATASTLVPGVSEVSASPRSPSIHSMS 2757
Score = 37 (18.1 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 22/88 (25%), Positives = 37/88 (42%)
Query: 11 WNEMEFLIKWKGQSHLHC-QWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIEL 69
W+ M FL+ QSH +W S + G ++ K + V ++ R ++
Sbjct: 796 WSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV-- 853
Query: 70 NDVSKEMDLDIIKQNSQVERIIADRISK 97
DV K+M + E +I R+SK
Sbjct: 854 -DVEKQMP-------KKYEHVIRCRLSK 873
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 517 (187.1 bits), Expect = 2.6e-81, Sum P(2) = 2.6e-81
Identities = 135/434 (31%), Positives = 233/434 (53%)
Query: 57 RFRKMVSREEIELNDVSKEMDLDIIKQNSQVERIIADRIS--KDSSGNVTQEYLVKWKGL 114
R R+ +++ N VS ++D ++I + I D +S KD + E + G
Sbjct: 330 RSRRFFAKKSY--NHVS-DLDGEVIVMKKED---ITDGVSTKKDLNDGDQNEVPLHDTGS 383
Query: 115 SYAEATWEKDEIIDFAQDAI-DEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
S + + +++ + + D+ AR+ ++A + G L Q +L
Sbjct: 384 SSSLSLLYNEDVASKKKRRVNDDGLARKKSIAGISEQRKFDEPNGSPVLHANKIQVPFLF 443
Query: 174 GGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVV 233
G LR+YQ GL +L ++TN ILADEMGLGKT+Q++++L L ++ GP L++V
Sbjct: 444 RGTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKENWGPHLIIV 503
Query: 234 PLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVG--RPIKFNTLLTTY 291
P S + NW EF+K+LP ++ Y G R+ +K+ G +P ++ +T+Y
Sbjct: 504 PTSVMLNWEMEFKKFLPGFKILTYYGNPQERK---------EKRSGWYKPDTWHVCITSY 554
Query: 292 EVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEEL 351
++VL+D + KW Y+++DEAH +KN +Q + +L F+ +++LL+TGTPLQN++ EL
Sbjct: 555 QLVLQDHQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTPLQNNLVEL 614
Query: 352 WALLHFL-------DHDKFKSKDDF-----------IQNYKNLSSFNENELANLHMELRP 393
W+LL+FL ++ F + DF I+ ++++ N +A LH LRP
Sbjct: 615 WSLLYFLMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNTVAKLHRVLRP 674
Query: 394 HILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIV 453
++LRR+ +VEK +P K E ++ ++S Q+ Y + R GN +S++N +
Sbjct: 675 YLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFINRA-RTREILASGNFMSIINCL 733
Query: 454 VELKKCCNHPFLFE 467
++L+K CNHP L E
Sbjct: 734 MQLRKVCNHPNLHE 747
Score = 394 (143.8 bits), Expect = 2.6e-81, Sum P(2) = 2.6e-81
Identities = 82/162 (50%), Positives = 108/162 (66%)
Query: 493 GKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAM 552
GKL +LD+LL L HRVLIF+QM ++LDIL ++++ G ++ RLDG+TK E R
Sbjct: 991 GKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNIHGHRYLRLDGATKIEQRQILT 1050
Query: 553 DHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVV 612
+ FN F+LSTR+GGLGINL ADTVI +DSDWNPQ D QA R+HRIGQ V
Sbjct: 1051 ERFNNDDKIPV-FILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDV 1109
Query: 613 NIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRK 654
+IYR ++ +VE ++L RA +K +LD +VIQ W RK
Sbjct: 1110 HIYRLISEYTVESNMLRRANQKRMLDKIVIQGGEFTTEWFRK 1151
Score = 41 (19.5 bits), Expect = 3.8e-44, Sum P(2) = 3.8e-44
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 1177 LEHEEELYKQDRMTMRLWNYVS-TFSNLSGEKLHQI 1211
L HEE + K D T+RL S F ++L+ +
Sbjct: 776 LLHEEPMTKLDLSTLRLIRTDSEAFDTFVSDELNSL 811
Score = 37 (18.1 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 302 SKIKWNYLMVDEAHRLKNSEAQL 324
S + WNYL+ L E +L
Sbjct: 243 SAVDWNYLLKTSDDLLSVDELKL 265
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 811 (290.5 bits), Expect = 4.3e-81, Sum P(2) = 4.3e-81
Identities = 179/398 (44%), Positives = 254/398 (63%)
Query: 284 FNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 343
F LLTTYE+ LKD A L W L+VDEAHRLKN + LY TL+E LL+TGTP
Sbjct: 146 FRVLLTTYEICLKDAAFLKFFDWAALVVDEAHRLKNQNSLLYETLTELPVGFSLLLTGTP 205
Query: 344 LQNSVEELWALLHFLDHDKFKSKD--DFIQNYKNLSSFNENELAN-LHMELRPHILRRII 400
+QNS++EL++LL F++ D F K +F++ Y+ + E+E A LH L+P +LRR+
Sbjct: 206 IQNSLQELYSLLSFIEPDIFPRKQVKEFVEYYQAVEK--ESEPAKELHNLLQPFLLRRVK 263
Query: 401 KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCC 460
+V LP K+E +L MS LQ++YYK IL ++ D +G G +V L N++++L+KC
Sbjct: 264 SEVTADLPKKVEVVLYHGMSALQRKYYKAILTKDL-DAFEGGTGRKVMLQNVLIQLRKCV 322
Query: 461 NHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVR 520
HP+LF + I D I+ +SGKL +LDKLL L++ HRVL+FSQM +
Sbjct: 323 AHPYLFNGVEPE---PFEIGD-----HIVEASGKLCLLDKLLSFLYDGGHRVLLFSQMTK 374
Query: 521 MLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSED-FCFLLSTRAGGLGINLA 579
+LDIL +YM Y+G+ ++RLDGS + E RH A+ +F G + F FLLSTRAGG+G+NL
Sbjct: 375 LLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNF---GQQPIFVFLLSTRAGGVGMNLT 431
Query: 580 TADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDH 639
ADTVI DSD+NPQNDLQA++RAHRIGQ + V I R + +VEE I RA K+ L +
Sbjct: 432 AADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVKIIRLIGRDTVEEIIYRRAASKLRLTN 491
Query: 640 LVIQKLNAEGSWRRKKQRKGNELSAILRFGAEELFKED 677
+++ + ++ +LS IL+FG ++L +
Sbjct: 492 AIVEGGQFALGVHKPQEASDLQLSEILKFGLDKLLSSE 529
Score = 758 (271.9 bits), Expect = 3.0e-75, Sum P(2) = 3.0e-75
Identities = 175/409 (42%), Positives = 249/409 (60%)
Query: 155 RKKGKASLRKLDEQPE----W-LRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKT 209
R+ G+A L Q E W L G KLR YQL+G+N+LV ++ IL DEMGLGKT
Sbjct: 19 RRAGRARAGGLGVQEEDVSRWGLTGIKLRPYQLDGVNWLVQCYQVQHGCILGDEMGLGKT 78
Query: 210 VQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQ 269
Q++S+L +L L++ PLS LSNW +E ++ P ++ + YVG + R QQ
Sbjct: 79 CQTISLLLYLTKKLTNKERSLILCPLSVLSNWKEELERFAPGLSFVTYVGNKEERYKLQQ 138
Query: 270 YEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLS 329
N K+ F LLTTYE+ LKD A L W L+VDEAHRLKN + LY TL+
Sbjct: 139 ----NLKEQSH---FRVLLTTYEICLKDAAFLKFFDWAALVVDEAHRLKNQNSLLYETLT 191
Query: 330 EFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKD--DFIQNYKNLSSFNENELAN- 386
E LL+TGTP+QNS++EL++LL F++ D F K +F++ Y+ + E+E A
Sbjct: 192 ELPVGFSLLLTGTPIQNSLQELYSLLSFIEPDIFPRKQVKEFVEYYQAVEK--ESEPAKE 249
Query: 387 LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQ 446
LH L+P +LRR+ +V LP K+E +L MS LQ++YYK IL ++ D +G G +
Sbjct: 250 LHNLLQPFLLRRVKSEVTADLPKKVEVVLYHGMSALQRKYYKAILTKDL-DAFEGGTGRK 308
Query: 447 VSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLH 506
V L N++++L+KC HP+LF + I D I+ +SGKL +LDKLL L+
Sbjct: 309 VMLQNVLIQLRKCVAHPYLFNGVEPE---PFEIGD-----HIVEASGKLCLLDKLLSFLY 360
Query: 507 ETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHF 555
+ HRVL+FSQM ++LDIL +YM Y+G+ ++RLDGS + E RH A+ +F
Sbjct: 361 DGGHRVLLFSQMTKLLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNF 409
Score = 37 (18.1 bits), Expect = 4.3e-81, Sum P(2) = 4.3e-81
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1186 QDRMTMRLWNYVSTFSNLSGEKLHQIYSKLKQ 1217
QD + + + + +NLSG KL + LK+
Sbjct: 796 QDLLALIVAQHRDRSNNLSGIKLSALEKGLKK 827
>UNIPROTKB|F1N8K9 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 GeneTree:ENSGT00560000076896
EMBL:AADN02065411 EMBL:AADN02065412 EMBL:AADN02065413
IPI:IPI00592819 Ensembl:ENSGALT00000023600 ArrayExpress:F1N8K9
Uniprot:F1N8K9
Length = 559
Score = 807 (289.1 bits), Expect = 7.5e-81, Sum P(2) = 7.5e-81
Identities = 199/445 (44%), Positives = 259/445 (58%)
Query: 454 VELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHETKHRVL 513
+ELKKCCNH +L + D + N L+ +I SSGKL++LDKLL+RL E +RVL
Sbjct: 1 MELKKCCNHCYLIKPPDD----NEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVL 56
Query: 514 IFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGG 573
IFSQMVRMLDILAEY+ Y+ F FQRLDGS K ELR QA+DHFNA GSEDFCFLLSTRAGG
Sbjct: 57 IFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGG 116
Query: 574 LGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKK 633
LGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ++ VNIYR VT SVEEDILERAKK
Sbjct: 117 LGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKK 176
Query: 634 KMVLDHLVIQKLNAEGSW------RRKKQRKGN--ELSAILRFGAEELFKEDRNDEESKK 685
KMVLDHLVIQ+++ G N ELSAIL+FGAEELFKE +E+ +
Sbjct: 177 KMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQ 236
Query: 686 RLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFKVANFCGAEDDGSFWSRWIKPEAVAQ 745
MDID S FKVANF ++D ++PE ++
Sbjct: 237 E---MDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIE----LEPERNSR 289
Query: 746 AEDALAPRAARNT----KSYAEANE----PERSNKRKK---KGSELQEPQERVHKRRKAE 794
+ + P + R + E E P N K+ GSE + + R + ++
Sbjct: 290 NWEEIIPESQRRRIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSD 349
Query: 795 -FSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQ-SQISLIARDAGGAVAT 852
+ P G + + S + RF ++ KFG ++ +ARDA +
Sbjct: 350 SITERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAVARDA--ELVD 407
Query: 853 APQEVVVELFDILIDGCREAVEVGS 877
+ + L +++ +GC +A++ S
Sbjct: 408 KSETDLRRLGELVHNGCIKALKDNS 432
Score = 211 (79.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 96/332 (28%), Positives = 145/332 (43%)
Query: 661 ELSAILRFGAEELFKEDRNDEESKKRLLGMDIDXXXXXXXXXXXXXXXXXXXXXXXSAFK 720
ELSAIL+FGAEELFKE +E+ + MDID S FK
Sbjct: 212 ELSAILKFGAEELFKEPEGEEQEPQE---MDIDEILKRAETRENEPGPLTVGDELLSQFK 268
Query: 721 VANFCGA-EDDGSFW----SR-W--IKPEA----VAQAEDA-------LAPRAARNTKSY 761
VANF EDD SR W I PE+ + + E + PR K
Sbjct: 269 VANFSNMDEDDIELEPERNSRNWEEIIPESQRRRIEEEERQKELEEIYMLPRMRNCAKQI 328
Query: 762 A-EANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSK 820
+ +E RS R+ GS+ ER KR K ++P R+ G S
Sbjct: 329 SFNGSEGRRSRSRRYSGSDSDSITER--KRPKKRGRPRTIP---------RENIKG-FSD 376
Query: 821 RDATRFYRAVMKFGNQ-SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPD 879
+ RF ++ KFG ++ +ARDA + + + L +++ +GC +A++ S
Sbjct: 377 AEIRRFIKSYKKFGGPLERLDAVARDA--ELVDKSETDLRRLGELVHNGCIKALKDNSSG 434
Query: 880 P----------KGPPLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYLK 929
KGP GV V A +I+ EEL L K I + K++ + + K
Sbjct: 435 QERAGGRLGKVKGPTFR-ISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTK 493
Query: 930 PSNWSKGCGWNQFDDARLLLGIHYHGFGNWEN 961
+++ W + DD+ LL+GI+ +G+G+WE+
Sbjct: 494 AAHFD--IDWGKEDDSNLLVGIYEYGYGSWED 523
Score = 39 (18.8 bits), Expect = 7.5e-81, Sum P(2) = 7.5e-81
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1158 LSKIRN-YLQLIGRRID-QIVLEHEEEL 1183
L K++ ++ G +++ ++V+ HEEEL
Sbjct: 442 LGKVKGPTFRISGVQVNAKLVISHEEEL 469
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 553 (199.7 bits), Expect = 8.1e-81, Sum P(5) = 8.1e-81
Identities = 125/337 (37%), Positives = 196/337 (58%)
Query: 142 AAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILA 201
AA+AE LQ K S + +L LR+YQ GL++LV N ILA
Sbjct: 884 AALAES-----LQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWLVTMNERKLNGILA 938
Query: 202 DEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTR 261
DEMGLGKT+Q++++L L A+ GP L+VVP S + NW EF+KW P ++ Y G++
Sbjct: 939 DEMGLGKTIQTIALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQ 998
Query: 262 ASREVCQQYEFYNDKKVG--RPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKN 319
R++ K+VG +P F+ +T+Y++V++D+ + KW YL++DEA +KN
Sbjct: 999 KERKL---------KRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKN 1049
Query: 320 SEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKNLSS- 378
++Q + L FST+ +LL+TGTPLQN + ELW+L+HFL F S +F + + N +
Sbjct: 1050 FKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTG 1109
Query: 379 -------FNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+NE + LH +RP +LRR+ K+VEK +P K E ++ +S Q+ Y+ +
Sbjct: 1110 MIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFM 1169
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFES 468
R GN +S++N++++L+K CNHP +FE+
Sbjct: 1170 SRA-KTRETLQTGNLLSVINVLMQLRKVCNHPNMFEA 1205
Score = 395 (144.1 bits), Expect = 8.1e-81, Sum P(5) = 8.1e-81
Identities = 77/151 (50%), Positives = 105/151 (69%)
Query: 493 GKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAM 552
GKL +D+LL +L HRVLIF+QM +MLD+L +++Y G + RLDGST+ E R M
Sbjct: 1658 GKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILM 1717
Query: 553 DHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVV 612
+ FN FCF+LSTR+GG+GINL ADTVI +DSDWNP D QA R HRIGQ V
Sbjct: 1718 ERFNGD-KRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDV 1776
Query: 613 NIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
+IYR V+ +++E +IL++A +K +L + I+
Sbjct: 1777 HIYRLVSERTIEVNILKKANQKRMLSDMAIE 1807
Score = 53 (23.7 bits), Expect = 3.0e-29, Sum P(4) = 3.0e-29
Identities = 48/212 (22%), Positives = 83/212 (39%)
Query: 54 EDVRFRKMVSREEIELNDVSKEMDLDI-IKQNSQVERIIADRISKDSSGNVTQEYLVKWK 112
+D F + ++ E N +SK+ + + I +++ + AD D S ++ L K+K
Sbjct: 734 DDSEFEAKEASDDDE-NTISKQEEAEQEIDHKKEIDELEADN---DLS---VEQLLAKYK 786
Query: 113 GLSYAEATWEK----DEIIDFAQD--AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLD 166
K D +D D A+D + E A E + DL K + + D
Sbjct: 787 SEQPPSPKRRKLAPRDPELDSDDDSTAVDSTEESEDAATEDEE--DLSTVKTDTDMEEQD 844
Query: 167 EQPEWLRGGKLRDYQLE----GLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNA 222
EQ + L+ + D G + N ++ L D L +++Q L +
Sbjct: 845 EQEDGLKS-LMADADATSGAAGSGSTAGASGNKDDM-LNDAAALAESLQPKG--NTLSST 900
Query: 223 QQI-PGPFLVVVPLSTLSNWAKEFRKWLPTMN 253
+ P PFL+ L + + WL TMN
Sbjct: 901 NVVTPVPFLLKHSLREYQHIGLD---WLVTMN 929
Score = 45 (20.9 bits), Expect = 8.1e-81, Sum P(5) = 8.1e-81
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 849 AVATAPQEVVVELFDILIDGCREAVEVGSPDP--KGPPLLDFFGVSVKANDLINRVEELQ 906
A TA EV +L + D E + + + DP +G P ++ ++ +L+ ++ ++
Sbjct: 1885 ATKTAKAEVAADLAEF--D---ENIPIATEDPNAEGGPQVELSKADLEMQNLVKQLSPIE 1939
Query: 907 LLAKR 911
A R
Sbjct: 1940 RYAMR 1944
Score = 43 (20.2 bits), Expect = 8.1e-81, Sum P(5) = 8.1e-81
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 1018 RKASKKGREKS----ENILNMP---ISRLKRDKKGKP--GSAKVNFQTTKDRFHKPQRVE 1068
R+ +K RE + ++ + P ++RL+R+ K + GS K N KPQ
Sbjct: 2076 RRPNKMRREDNYVPPRSLFDRPTPQLARLRRELKSQRFRGSFKPNMPIPG---LKPQLPT 2132
Query: 1069 QPLTKEE 1075
+PLT+ E
Sbjct: 2133 KPLTEPE 2139
Score = 40 (19.1 bits), Expect = 8.1e-81, Sum P(5) = 8.1e-81
Identities = 21/101 (20%), Positives = 47/101 (46%)
Query: 11 WNEMEFLIKWKGQSHLHCQWKSFAELQNLSGF-KKVLNYAKKVVEDVR--FRKMVSREEI 67
W+ +E L+++K Q+ + + K + Q+LS + +++++VE + S
Sbjct: 589 WSNVEKLVEYKHQTKIEEKRKQALD-QHLSFIVDQTEKFSQQLVEGMNKSVADTPSLNSS 647
Query: 68 ELNDVSKEMDLDIIKQNSQV--ERIIADRISKDSSGNVTQE 106
L +E D D ++ E IA +++ + +V +E
Sbjct: 648 RLTSPKRESDDDFRPESGSEDDEETIAK--AEEDAADVKEE 686
Score = 40 (19.1 bits), Expect = 6.3e-28, Sum P(4) = 6.3e-28
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 88 ERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREAA-MAE 146
+++I D I KD + +V + S A E +E +A D YK +E M +
Sbjct: 1452 QQLIRDPIVKDLATHVKSTVQKQ----SIANGKTEPEE----ETEAEDPYKVQELIQMRK 1503
Query: 147 QGKMVDLQRKKGKASLRKLDEQP 169
+ ++ L+R + R+ D P
Sbjct: 1504 EQRLAALKRM-AMINRRRTDATP 1525
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 539 (194.8 bits), Expect = 1.4e-80, Sum P(3) = 1.4e-80
Identities = 125/339 (36%), Positives = 196/339 (57%)
Query: 152 DLQRKKGKASLRKLDEQ-PEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTV 210
D + K + L +D P LRG LR YQ +GLN+L + + N TN ILADEMGLGKT+
Sbjct: 671 DAETKVQEEQLSVVDVPVPSLLRGN-LRTYQKQGLNWLASLYNNHTNGILADEMGLGKTI 729
Query: 211 QSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQY 270
Q++S+L +L ++ GP L+VVP S L NW EF+++ P V+ Y G+ R+ ++
Sbjct: 730 QTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRK--EKR 787
Query: 271 EFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSE 330
+ +N +P F+ + +Y++V++D+ + +W Y+++DEAH +KN + + L
Sbjct: 788 KGWN-----KPDAFHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLN 842
Query: 331 FSTKNKLLITGTPLQNSVEELWALLHFL---------------DHDKFKS-----KDDFI 370
F+T+ +LL+TGTPLQN++ ELW+LL+FL D D F+ D I
Sbjct: 843 FNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKII 902
Query: 371 QNYKNLSSFNENE--LANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYK 428
+ +N E + +A LH LRP++LRR+ DVEK +P K E I+ ++S Q+ Y
Sbjct: 903 ETGQNFGQDKETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYD 962
Query: 429 WILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+ R GN +S++N +++L+K CNHP LFE
Sbjct: 963 DFMSRAQTKATLA-SGNFMSIVNCLMQLRKVCNHPNLFE 1000
Score = 377 (137.8 bits), Expect = 1.4e-80, Sum P(3) = 1.4e-80
Identities = 76/152 (50%), Positives = 105/152 (69%)
Query: 493 GKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAM 552
GKL L LL +L + HR LIF+QM ++LD+L ++++Y G+ + RLDG+TK E R
Sbjct: 1246 GKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILT 1305
Query: 553 DHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVV 612
+ FN S F+LS+R+GGLGINL ADTVI +DSDWNP D Q R HRIGQ V
Sbjct: 1306 ERFNTD-SRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDV 1364
Query: 613 NIYRFVTSKSVEEDILERAKKKMVLDHLVIQK 644
+IYRFV+ ++E +IL++A +K LD++VIQ+
Sbjct: 1365 HIYRFVSEHTIESNILKKANQKRQLDNVVIQE 1396
Score = 43 (20.2 bits), Expect = 4.5e-28, Sum P(3) = 4.5e-28
Identities = 31/141 (21%), Positives = 61/141 (43%)
Query: 68 ELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEII 127
+ DV + + L + K+N+QV R+ D + N+ + + K L+ A E+ +
Sbjct: 1017 DYKDVERTL-LKLFKKNNQVNRVDLDFL------NLV--FTLNDKDLTSYHA--EEISKL 1065
Query: 128 DFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQ--LEGL 185
++ ++E + E K LQ + G+AS + ++ + + + ++ L
Sbjct: 1066 TCVKNFVEEVNK----LRETNKQ--LQEEFGEASFLNFQDANQYFKYSNKQKLEGTVDML 1119
Query: 186 NFL--VNSWRNDTNVILADEM 204
NFL VN R D I +
Sbjct: 1120 NFLKMVNKLRCDRRPIFGKNL 1140
Score = 43 (20.2 bits), Expect = 2.9e-27, Sum P(4) = 2.9e-27
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 123 KDEIIDFAQDAIDE-YKAREAA--MAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRD 179
K + FA A+ + + E A + + + L+R +GK L K+ E+ L +L
Sbjct: 406 KKSLARFAVQAVKKRWNMAEKAYRILRKDEEEQLKRIEGKQHLSKMLEKSTQLLEAQLNQ 465
Query: 180 YQLEGLNFLVNSWRNDTNVILADEM 204
+G + +S ND D+M
Sbjct: 466 VNDDGRSSTPSSDSNDVLSESDDDM 490
Score = 42 (19.8 bits), Expect = 1.4e-80, Sum P(3) = 1.4e-80
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 743 VAQAEDA-------LAPRAAR-NTKSYAEANEPERSNKRKKKGSELQEPQERVH 788
+AQAED LA R + + E+ E + +N+ ++ +EL E + H
Sbjct: 1446 LAQAEDEDDVKAANLAMREVEIDNDDFDESTEKKAANEEEENHAELDEYEGTAH 1499
Score = 41 (19.5 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 11/56 (19%), Positives = 27/56 (48%)
Query: 576 INLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERA 631
I+L T D + +D N+L + + +++++ + +T +V D+ + A
Sbjct: 1141 IDLLTKDRRVKYDKSSIIDNELIKPLQTRVLDNRKIIDTFAVLTPSAVSLDMRKLA 1196
Score = 39 (18.8 bits), Expect = 2.9e-27, Sum P(4) = 2.9e-27
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 288 LTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKN 335
LT+Y ++ + L+ +K N+ V+E ++L+ + QL E S N
Sbjct: 1054 LTSYHA--EEISKLTCVK-NF--VEEVNKLRETNKQLQEEFGEASFLN 1096
Score = 37 (18.1 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 29 QWKSFAELQNLSGFKKVLNYAKKV 52
Q+ ++ Q L G +LN+ K V
Sbjct: 1102 QYFKYSNKQKLEGTVDMLNFLKMV 1125
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 556 (200.8 bits), Expect = 1.5e-80, Sum P(5) = 1.5e-80
Identities = 117/299 (39%), Positives = 179/299 (59%)
Query: 177 LRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLS 236
LR+YQ GL++LV+ + + N ILADEMGLGKT+ ++S++ +L + + GP L+VVP S
Sbjct: 781 LREYQHIGLDWLVSLYEKNLNGILADEMGLGKTIMTISLIAYLAVQKGVWGPHLIVVPSS 840
Query: 237 TLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLK 296
L NW EF++W P + + Y GT R+ N K + F+ +T+Y +V+
Sbjct: 841 VLFNWEMEFKRWCPGLKIFTYHGTSRDRKA-------NRKGWSKSNAFHVCITSYSMVMS 893
Query: 297 DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLH 356
D + + KW Y+++DEAH +KN + Q + + F+T+ +LL+TGTPLQN++ ELW+L+H
Sbjct: 894 DHLIFRRKKWVYMILDEAHVIKNFKTQRWQNMLHFNTERRLLLTGTPLQNNLMELWSLMH 953
Query: 357 FLDHDKFKSKDDFIQNYKNL--------SSFNENELANLHMELRPHILRRIIKDVEKSLP 408
FL D F+S +F + N NE+ + LH LRP +LRR+ KDVEK +P
Sbjct: 954 FLMPDIFQSHREFQDWFSNPVTGMIEGGDDVNEDIINRLHAVLRPFLLRRLKKDVEKQMP 1013
Query: 409 PKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
PK I+ MS QK Y+ + + G+ S++NI+++L+K CNHP LFE
Sbjct: 1014 PKHTHIVPCSMSRRQKFLYEEFINSSSTQSTLS-SGSFFSIINILMQLRKVCNHPDLFE 1071
Score = 381 (139.2 bits), Expect = 1.5e-80, Sum P(5) = 1.5e-80
Identities = 93/235 (39%), Positives = 129/235 (54%)
Query: 419 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCC----NHPFLFES-ADHGY 473
M+P+Q+Q + NF L R ++LL K N L + +
Sbjct: 1295 MTPIQRQQSMIKIIENFTFLISTARAEPITLLQYGASPSKLLEEHRNEVLLINGLSKSSF 1354
Query: 474 GGDTSINDTSKL----ERII-LSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEY 528
KL +R+I GKL L LL RL + HR LIF+QM +MLDI +
Sbjct: 1355 DAFYPSYQRMKLYFPDKRLIQYDCGKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETF 1414
Query: 529 MSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFD 588
++ + + RLDGSTK + R + FN + F F+LSTR+GGLG+NL ADTVI +D
Sbjct: 1415 LNLHAYTYLRLDGSTKIDKRQVLTERFNTD-PKIFLFILSTRSGGLGLNLTGADTVIFYD 1473
Query: 589 SDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 643
+DWNP D QA R HRIGQ VNIYRF+T ++EE+IL+++ +K LD +VI+
Sbjct: 1474 TDWNPSMDAQAQDRCHRIGQTREVNIYRFITQHTIEENILKKSNQKRQLDKMVIK 1528
Score = 49 (22.3 bits), Expect = 1.5e-80, Sum P(5) = 1.5e-80
Identities = 19/98 (19%), Positives = 47/98 (47%)
Query: 11 WNEMEFLIKWKGQSHLHC--QWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIE 68
WN+++ L+++K + H + + +L+ + G K Y+ + E++R I
Sbjct: 576 WNQIKKLVQYKDKIHQDSINKIERDKQLELIVG--KTEAYSNLLAENLRGHHH-HHSTIT 632
Query: 69 LNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQE 106
D+ + D D+ + +++E S +SS +++ +
Sbjct: 633 PKDLLNQFDHDVDEDGNEIEYNDDFNTSDESSCDLSDD 670
Score = 46 (21.3 bits), Expect = 1.5e-80, Sum P(5) = 1.5e-80
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 1058 KDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKE 1090
K+R + + E + KE+G +NE+ E+ KE
Sbjct: 1765 KEREKQEKENEIEIEKEKGNEKENEKENEKEKE 1797
Score = 45 (20.9 bits), Expect = 1.5e-80, Sum P(5) = 1.5e-80
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 653 RKKQRKGNELSAILRFGAE-ELFKEDRNDEESKK 685
R+KQ K NE+ G E E KE+ ++E+++
Sbjct: 1767 REKQEKENEIEIEKEKGNEKENEKENEKEKENER 1800
Score = 45 (20.9 bits), Expect = 3.1e-80, Sum P(6) = 3.1e-80
Identities = 18/92 (19%), Positives = 45/92 (48%)
Query: 1028 SENILNMPISRLKRDKKGKPGSAKVNFQT----TKDRFHKPQRVEQPLTKEEGEMSDNEE 1083
SE L M +R R+KK + A++ Q ++ + + Q+ +Q +++ + ++
Sbjct: 2490 SEMAL-MTTNRFIREKKNQMLQAQLQAQQRAQMSQQQQQQQQQQQQQQQQQQQQQQQQQQ 2548
Query: 1084 VYEQFKEVKWMEWCEDVMADEIRTLQRLQRLQ 1115
+Q ++ + + + + + LQ+ Q+LQ
Sbjct: 2549 QQQQQQQQQQQQQQQPQQPQQPQQLQQPQQLQ 2580
Score = 44 (20.5 bits), Expect = 4.0e-80, Sum P(6) = 4.0e-80
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 759 KSYAEANEPERSNKRKKKGSELQEPQER 786
K NE E N+++K + +E QE+
Sbjct: 1745 KENENENENENENEKEKDNEKEREKQEK 1772
Score = 42 (19.8 bits), Expect = 1.5e-26, Sum P(6) = 1.5e-26
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 359 DHDKFKSKDDFIQNYKNLSSFNENELA 385
D D ++DD N N ++ NEN ++
Sbjct: 716 DDDNNNNEDDNNNNNNNNNNNNENSIS 742
Score = 41 (19.5 bits), Expect = 1.5e-80, Sum P(5) = 1.5e-80
Identities = 13/62 (20%), Positives = 30/62 (48%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAEFSVP 798
K EA AQA+ A + N S + +++ ++ +LQ+ Q++ + + + + P
Sbjct: 2994 KKEAAAQAQAAAQAASLPNQSSQPSIHAQIQASLQQ----QLQQQQQQQQNQNQPQQTTP 3049
Query: 799 SV 800
+
Sbjct: 3050 KL 3051
Score = 41 (19.5 bits), Expect = 8.1e-80, Sum P(6) = 8.1e-80
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 757 NTKSYAEANEPERSNKRKKKGSELQE 782
N K + NE E+ N+R K + Q+
Sbjct: 1784 NEKENEKENEKEKENERDKDKDKDQD 1809
Score = 40 (19.1 bits), Expect = 1.5e-80, Sum P(5) = 1.5e-80
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 1207 KLHQIYSKLKQERQEEAGIGPSHINGSASGSIDNDLNFSTFNRHAERQKGHKNVSTYQMT 1266
K+ +I K + + A S N S+ SI + S + ++Q+ +N + Q T
Sbjct: 2988 KVKKISKKEAAAQAQAAAQAASLPNQSSQPSIHAQIQASLQQQLQQQQQQQQNQNQPQQT 3047
Query: 1267 EP 1268
P
Sbjct: 3048 TP 3049
Score = 40 (19.1 bits), Expect = 1.0e-79, Sum P(6) = 1.0e-79
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 1022 KKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEE 1075
K+G+ + + S+ +K K + + KD+ K ++ E+ KE+
Sbjct: 2085 KRGKIQKQVAQQYVYSKQHTKEKEKERKLLMKMKKEKDKIEKAKQEEERRAKEK 2138
Score = 40 (19.1 bits), Expect = 1.0e-79, Sum P(6) = 1.0e-79
Identities = 15/104 (14%), Positives = 43/104 (41%)
Query: 1025 REKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEV 1084
REK +L + +R + + + Q + + + Q+ +Q +++ + ++
Sbjct: 2502 REKKNQMLQAQLQAQQRAQMSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 2561
Query: 1085 YEQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLPKEKVAS 1128
+ + + + + + + LQ+ Q+LQ P ++ S
Sbjct: 2562 QQPQQPQQPQQLQQPQQLQQPQQLQQPQQLQPQQLQQPPQQPQS 2605
Score = 40 (19.1 bits), Expect = 2.7e-79, Sum P(6) = 2.7e-79
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 54 EDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGN 102
ED ++ S+E +E + EM LD + + E+ +D D++ N
Sbjct: 676 EDDDGEQLESKEYLEELKLESEMPLDELLKKLDQEK--SDNDDDDNNNN 722
Score = 40 (19.1 bits), Expect = 4.4e-45, Sum P(4) = 4.4e-45
Identities = 15/75 (20%), Positives = 33/75 (44%)
Query: 1153 HFIQVLSKIRNYLQLIGRRIDQIVLEHEEELYKQDRMTMRLWNYVSTFS---NLSGEK-L 1208
H I ++ Y + I++ +L+ + + D+M ++ + + F NLS + +
Sbjct: 1489 HRIGQTREVNIYRFITQHTIEENILKKSNQKRQLDKMVIKAGEFTTDFFKNLNLSTKSSI 1548
Query: 1209 HQIYSKLKQERQEEA 1223
I + Q+ E A
Sbjct: 1549 DTIKDNVTQQEWENA 1563
Score = 39 (18.8 bits), Expect = 8.3e-80, Sum P(5) = 8.3e-80
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 1019 KASKKGREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEM 1078
K ++K REK E + I + K ++K + K N + ++ K + +Q K++ EM
Sbjct: 1761 KDNEKEREKQEKENEIEIEKEKGNEKE---NEKENEKEKENERDKDKDKDQDQDKDQ-EM 1816
Query: 1079 SDNEEV 1084
E+
Sbjct: 1817 KIINEI 1822
Score = 39 (18.8 bits), Expect = 5.1e-45, Sum P(5) = 5.1e-45
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 590 DWNPQNDLQAMSRAHRIGQQEVVNI 614
D N ND + R R+G+ + V I
Sbjct: 1965 DENEGNDFEGGGRGGRVGEGKKVMI 1989
Score = 39 (18.8 bits), Expect = 5.1e-45, Sum P(5) = 5.1e-45
Identities = 19/82 (23%), Positives = 35/82 (42%)
Query: 568 STRAGGLGINLATADTVII-FDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEED 626
S+ G+ IN +D ++ W+ Q D + G+ ++ F+ S
Sbjct: 2338 SSSISGIFIN---SDLILNHMGPPWSQQEDKLILDNVKNFGENW--DLITFIIQNSNYSR 2392
Query: 627 I--LERAKKKMVLDHLVIQKLN 646
I + R+K ++ + VIQK N
Sbjct: 2393 INRVTRSKSQISERYKVIQKEN 2414
Score = 39 (18.8 bits), Expect = 7.2e-26, Sum P(5) = 7.2e-26
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 389 MELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNK-GVRG 444
M+L + + K + P + +I V M ++K + R H+L K GV G
Sbjct: 434 MQLLAQVNPQDFKPIPLPPPSALIQIPPVSMDIIEKAKEDAKIMRRIHELQKKGVWG 490
Score = 37 (18.1 bits), Expect = 2.1e-79, Sum P(6) = 2.1e-79
Identities = 7/56 (12%), Positives = 29/56 (51%)
Query: 739 KPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRKAE 794
K + QA+ RA + + + + ++ +++++ + Q+ Q++ ++++ +
Sbjct: 2504 KKNQMLQAQLQAQQRAQMSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 2559
Score = 37 (18.1 bits), Expect = 4.4e-45, Sum P(4) = 4.4e-45
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 884 PLLDFFGVSVKANDLINRVEELQLLAKRISRYEDPIKQFRVLSYL 928
P+ D+F +S +N + + L+ I R + IK ++L
Sbjct: 1270 PIRDWFTISKPSNYMSYSNYLVDLIMTPIQRQQSMIKIIENFTFL 1314
Score = 37 (18.1 bits), Expect = 8.2e-45, Sum P(5) = 8.2e-45
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQR 657
Q++V Y + + E++ + KM + I+K E R K++R
Sbjct: 2090 QKQVAQQYVYSKQHTKEKEKERKLLMKMKKEKDKIEKAKQEEERRAKEKR 2139
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 533 (192.7 bits), Expect = 1.9e-79, Sum P(4) = 1.9e-79
Identities = 124/320 (38%), Positives = 185/320 (57%)
Query: 169 PEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGP 228
P LRG LR+YQ GL++L + N N ILADEMGLGKT+Q++++L L + GP
Sbjct: 818 PHLLRG-TLREYQHFGLDWLAGLYSNHINGILADEMGLGKTIQTIALLAHLAVEHGVWGP 876
Query: 229 FLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLL 288
LVVVP S + NW EF+KW P ++ Y G + R Q+ + D +N L+
Sbjct: 877 HLVVVPTSVILNWEMEFKKWCPGFKIMTYYGNQEERR--QKRRGWMDDN-----SWNVLI 929
Query: 289 TTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
T+Y++VL+D+ VL + W+Y+++DEAH +KN +Q + L F T+ +LL+TGTPLQN++
Sbjct: 930 TSYQLVLQDQQVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRARLLLTGTPLQNNL 989
Query: 349 EELWALLHFL---DHDK-----FKSKDDFIQNYKN-----LSSFNE---NE----LANLH 388
ELW+LL FL D D+ F +F + ++ L E +E + LH
Sbjct: 990 TELWSLLFFLMPTDGDEAGIEGFADLRNFSEWFRRPVEQILEHGRETMDDEAKQVVTKLH 1049
Query: 389 MELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVS 448
LRP+ILRR+ DVEK +P K E ++ +S Q+ Y + R GN +S
Sbjct: 1050 TVLRPYILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLYDGFMSRA-QTKETLASGNYLS 1108
Query: 449 LLNIVVELKKCCNHPFLFES 468
++N +++L+K CNHP LFE+
Sbjct: 1109 IINCLMQLRKVCNHPDLFET 1128
Score = 375 (137.1 bits), Expect = 1.9e-79, Sum P(4) = 1.9e-79
Identities = 77/152 (50%), Positives = 102/152 (67%)
Query: 493 GKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAM 552
GKL LDKLL L HR LIF+QM +MLD+L ++++ G ++ RLDG+TK E R
Sbjct: 1373 GKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNIHGHRYLRLDGTTKVEQRQILT 1432
Query: 553 DHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVV 612
D FN + F+LS+R+GGLGINL ADTVI +D DWNP D Q R HRIGQ V
Sbjct: 1433 DRFNND-NRILAFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDV 1491
Query: 613 NIYRFVTSKSVEEDILERAKKKMVLDHLVIQK 644
+IYRFV+ ++E +IL +A +K +LD +VIQ+
Sbjct: 1492 HIYRFVSEYTIESNILRKANQKRMLDDVVIQE 1523
Score = 46 (21.3 bits), Expect = 1.9e-79, Sum P(4) = 1.9e-79
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 136 EYKA-REAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRG 174
E++A R+AA + ++ RK+ K L EQ E +RG
Sbjct: 359 EHRAHRQAAKSLAAACAEVWRKRNKDPEDILREQQEEMRG 398
Score = 45 (20.9 bits), Expect = 1.9e-79, Sum P(4) = 1.9e-79
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 738 IKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQE 785
+K EA A + L R ++ + +A + E + K EL+ +
Sbjct: 1546 LKDEASAAMDRVLENRVTNTSRVFEQAEDKEDIDAAKNAQKELEHADD 1593
Score = 41 (19.5 bits), Expect = 5.0e-79, Sum P(4) = 5.0e-79
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 742 AVAQAEDALAPRAARNTKSYAEANEPERSNKRKKKGSELQEPQERVHKRRK 792
+V +D L N K ++S K+ KKG E R+ KRR+
Sbjct: 1653 SVGHIDDYLLRFMEWNMKDEPLVLPVDKSMKKSKKGKE-----HRLRKRRR 1698
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 534 (193.0 bits), Expect = 1.7e-78, Sum P(5) = 1.7e-78
Identities = 116/315 (36%), Positives = 181/315 (57%)
Query: 161 SLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQ 220
S K+ + +L LR+YQ GL++LV + N ILADEMGLGKT+ ++++L L
Sbjct: 520 STTKVRTKLPFLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLA 579
Query: 221 NAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGR 280
+ I GP L+VVP S + NW EF KW P ++ Y G+ R++ +Q K+
Sbjct: 580 CDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQ----GWMKLN- 634
Query: 281 PIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLIT 340
F+ +TTY +V++D + + KW YL++DEAH +KN ++Q + TL F++K ++L+T
Sbjct: 635 --SFHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT 692
Query: 341 GTPLQNSVEELWALLHFLDHDKFKSKDDFIQNYKN--------LSSFNENELANLHMELR 392
GTPLQN + ELW+L+HFL F+S +F + N N+ + LH LR
Sbjct: 693 GTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLR 752
Query: 393 PHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNI 452
P +LRR+ +DVEK LP K E ++ +S Q+ Y+ + G+ +++I
Sbjct: 753 PFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATL-TSGSFFGMISI 811
Query: 453 VVELKKCCNHPFLFE 467
+++L+K CNHP LFE
Sbjct: 812 IMQLRKVCNHPDLFE 826
Score = 389 (142.0 bits), Expect = 1.7e-78, Sum P(5) = 1.7e-78
Identities = 94/207 (45%), Positives = 127/207 (61%)
Query: 487 RII-LSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKA 545
R+I GKL L LL +L HR LIF+QM +MLD+L +++ G+ + RLDGST
Sbjct: 1068 RLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPP 1127
Query: 546 ELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR 605
E R M FN + F F+LSTR+GG+GINL ADTVI +DSDWNP D QA R HR
Sbjct: 1128 EERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHR 1186
Query: 606 IGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSAI 665
IGQ V+IYR ++ ++EE+IL++A +K VLD+LVIQ N E + K+ EL +
Sbjct: 1187 IGQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQ--NGEYNTEFFKKLDPMELFS- 1243
Query: 666 LRFGAEELFKEDRNDEESKKRLLGMDI 692
G + L +D ++E+ K G DI
Sbjct: 1244 ---GHKALTTKD--EKETSKHC-GADI 1264
Score = 41 (19.5 bits), Expect = 1.7e-78, Sum P(5) = 1.7e-78
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 39 LSGFKKV-LNYAKKVVEDV-RFRKMVSREEIELNDVSKEMDLDIIKQNSQVERII 91
L+ KKV L +K +++ R + + EE L V+ + D+ K +VE+++
Sbjct: 70 LAQAKKVALRASKGMLDQASREERKLKEEEQRLRKVALNISKDMKKFWMKVEKLV 124
Score = 39 (18.8 bits), Expect = 1.7e-78, Sum P(5) = 1.7e-78
Identities = 17/64 (26%), Positives = 26/64 (40%)
Query: 1022 KKGREKSENILNMPISR--LKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMS 1079
++ E +E +L S LK KK K AK + + V+ + E+
Sbjct: 1484 REAAEVAEMVLTQNESAHVLKPKKKKKAKKAKYKSLKKGSLAAESKHVKSVVKIEDSTDD 1543
Query: 1080 DNEE 1083
DNEE
Sbjct: 1544 DNEE 1547
Score = 39 (18.8 bits), Expect = 1.7e-78, Sum P(5) = 1.7e-78
Identities = 33/124 (26%), Positives = 48/124 (38%)
Query: 1194 WNYVS-TFSNLS------GEKLHQIYSKLKQERQEEAGIGPSHINGSASGSIDNDLNFST 1246
WN+VS T ++ G H Y ER E + HI SAS S N+ N +T
Sbjct: 1693 WNFVSGTLYGMTAGGAYRGRYRHPAYCC---ERYRE--LIQRHIL-SASDSAVNEKNLNT 1746
Query: 1247 FNRHAERQKGHKNVSTY---QMTEPIHKGIDPKKFEA-----WKRRRRAETD-MYSQAQP 1297
+ A + +N+ T +P + + K F W+ R D M S P
Sbjct: 1747 GSGKALLKVTEENIRTLLNVAAEQPDTEMLLQKHFSCLLSSIWRTSTRTGNDQMLSLNSP 1806
Query: 1298 MLQR 1301
+ R
Sbjct: 1807 IFNR 1810
Score = 37 (18.1 bits), Expect = 4.5e-78, Sum P(5) = 4.5e-78
Identities = 9/42 (21%), Positives = 23/42 (54%)
Query: 65 EEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQE 106
EE E + +E ++ ++V+ + + + + +SG V++E
Sbjct: 229 EEDEKHFTKRERQEELEALQNEVDLPVEELLRRYTSGRVSRE 270
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 524 (189.5 bits), Expect = 5.5e-77, Sum P(3) = 5.5e-77
Identities = 122/303 (40%), Positives = 184/303 (60%)
Query: 177 LRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLS 236
LRDYQ GL++L+ ++N+ N ILADEMGLGKT+Q +S+L +L I GP LV+VP S
Sbjct: 662 LRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPHLVIVPTS 721
Query: 237 TLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVG--RPIKFNTLLTTYEVV 294
L NW E +++ P ++ Y G + R Y+ K+VG F+ +++Y V
Sbjct: 722 ILINWEIELKRFCPCFKILSYYGNQNER-----YK----KRVGWFNKDSFHICISSYSTV 772
Query: 295 LKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWAL 354
+KD V + +W Y+++DEAH +KN + + + N LLITGTPLQNS+EELW+L
Sbjct: 773 VKDHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTPLQNSLEELWSL 832
Query: 355 LHFLDHDKFKSKDDFIQNYK---NLSS-----FNENELAN-LHMELRPHILRRIIKDVEK 405
LHFL + F S DF + + NL+ + EL + LH +RP+ILRR+ K+VEK
Sbjct: 833 LHFLMPNIFTSHLDFKEWFSDPLNLAIEKSKIHHSKELIDRLHTVIRPYILRRLKKNVEK 892
Query: 406 SLPPKIERILRVEMSPLQKQYY-KWILERNFHD-LNKGVRGNQVSLLNIVVELKKCCNHP 463
+P K E I++ +++ Q+ Y ++I +N + LN G N + L+NI+++L+K CNH
Sbjct: 893 EMPNKYEHIIKCKLTRRQQILYDEFINNKNVQNTLNTG---NYIGLMNILIQLRKVCNHC 949
Query: 464 FLF 466
LF
Sbjct: 950 DLF 952
Score = 349 (127.9 bits), Expect = 5.5e-77, Sum P(3) = 5.5e-77
Identities = 73/163 (44%), Positives = 105/163 (64%)
Query: 488 IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAEL 547
I L SGKL L+KLL + ++ L+F+Q ++MLDIL ++++ + F RLDGSTK E
Sbjct: 1763 ISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQ 1822
Query: 548 RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 607
R + + FN S F F+ STR+G +GINL A+ VI +D+DWNP D QAM R HRIG
Sbjct: 1823 RQKIVTKFNNDKSI-FIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRIG 1881
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGS 650
Q + V+++RFV +VEE+I ++ +K LD++ I N S
Sbjct: 1882 QTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICINMGNFNNS 1924
Score = 58 (25.5 bits), Expect = 5.5e-77, Sum P(3) = 5.5e-77
Identities = 26/123 (21%), Positives = 53/123 (43%)
Query: 11 WNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELN 70
W ++E L+ + + L E++ FKK + A K ++D R E +
Sbjct: 148 WKKIEKLVWEEKKRELQQTLNKKKEMR----FKKFVKEAIKKIKDARHNNAHELFENKYV 203
Query: 71 DVSKEMDLDIIKQN-SQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDF 129
+S + +I+ N S V+ + D + ++YL+ + +S + + K+E I+
Sbjct: 204 SMSSNNNSEIVNNNASSVDNGDKELKEDDLTDQEEEDYLLD-EQMSSTDESENKEEEINM 262
Query: 130 AQD 132
D
Sbjct: 263 LDD 265
Score = 48 (22.0 bits), Expect = 6.2e-76, Sum P(3) = 6.2e-76
Identities = 21/91 (23%), Positives = 44/91 (48%)
Query: 33 FAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVERIIA 92
+ EL+ + GF+ ++ Y +V + + K++S ++ +S + I KQ + +R+
Sbjct: 80 YYELKEMKGFQDLVMY--EVKKKKKHFKVLSHSCLKY--LSNREKMKIKKQEEEEKRL-- 133
Query: 93 DRISKDSSGNVTQEYLVKWKGLSYAEATWEK 123
K S N++ V WK + + WE+
Sbjct: 134 ----KLYSKNISSYMDVFWKKIE--KLVWEE 158
Score = 47 (21.6 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 47 NYAKKVVEDVRFRKMVSREEI--ELNDVSKEMDLDIIKQNSQVERIIADRISKDS 99
N +K + R+ K + + E ++V +E D+ K N VE+ D KD+
Sbjct: 1587 NKKRKCKREKRWYKKIKKTNNPPEDSEVYRENSSDVEKYNCDVEKDNCDDEEKDN 1641
Score = 39 (18.8 bits), Expect = 9.3e-26, Sum P(3) = 9.3e-26
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 363 FKSKDDFIQNYKNLSSFNE-NELANLH 388
FKS +D+I +N NE N + H
Sbjct: 281 FKSGEDYINFMENEDDANEENVIETSH 307
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 524 (189.5 bits), Expect = 5.5e-77, Sum P(3) = 5.5e-77
Identities = 122/303 (40%), Positives = 184/303 (60%)
Query: 177 LRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLS 236
LRDYQ GL++L+ ++N+ N ILADEMGLGKT+Q +S+L +L I GP LV+VP S
Sbjct: 662 LRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPHLVIVPTS 721
Query: 237 TLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVG--RPIKFNTLLTTYEVV 294
L NW E +++ P ++ Y G + R Y+ K+VG F+ +++Y V
Sbjct: 722 ILINWEIELKRFCPCFKILSYYGNQNER-----YK----KRVGWFNKDSFHICISSYSTV 772
Query: 295 LKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWAL 354
+KD V + +W Y+++DEAH +KN + + + N LLITGTPLQNS+EELW+L
Sbjct: 773 VKDHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTPLQNSLEELWSL 832
Query: 355 LHFLDHDKFKSKDDFIQNYK---NLSS-----FNENELAN-LHMELRPHILRRIIKDVEK 405
LHFL + F S DF + + NL+ + EL + LH +RP+ILRR+ K+VEK
Sbjct: 833 LHFLMPNIFTSHLDFKEWFSDPLNLAIEKSKIHHSKELIDRLHTVIRPYILRRLKKNVEK 892
Query: 406 SLPPKIERILRVEMSPLQKQYY-KWILERNFHD-LNKGVRGNQVSLLNIVVELKKCCNHP 463
+P K E I++ +++ Q+ Y ++I +N + LN G N + L+NI+++L+K CNH
Sbjct: 893 EMPNKYEHIIKCKLTRRQQILYDEFINNKNVQNTLNTG---NYIGLMNILIQLRKVCNHC 949
Query: 464 FLF 466
LF
Sbjct: 950 DLF 952
Score = 349 (127.9 bits), Expect = 5.5e-77, Sum P(3) = 5.5e-77
Identities = 73/163 (44%), Positives = 105/163 (64%)
Query: 488 IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAEL 547
I L SGKL L+KLL + ++ L+F+Q ++MLDIL ++++ + F RLDGSTK E
Sbjct: 1763 ISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQ 1822
Query: 548 RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 607
R + + FN S F F+ STR+G +GINL A+ VI +D+DWNP D QAM R HRIG
Sbjct: 1823 RQKIVTKFNNDKSI-FIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRIG 1881
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGS 650
Q + V+++RFV +VEE+I ++ +K LD++ I N S
Sbjct: 1882 QTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICINMGNFNNS 1924
Score = 58 (25.5 bits), Expect = 5.5e-77, Sum P(3) = 5.5e-77
Identities = 26/123 (21%), Positives = 53/123 (43%)
Query: 11 WNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELN 70
W ++E L+ + + L E++ FKK + A K ++D R E +
Sbjct: 148 WKKIEKLVWEEKKRELQQTLNKKKEMR----FKKFVKEAIKKIKDARHNNAHELFENKYV 203
Query: 71 DVSKEMDLDIIKQN-SQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDF 129
+S + +I+ N S V+ + D + ++YL+ + +S + + K+E I+
Sbjct: 204 SMSSNNNSEIVNNNASSVDNGDKELKEDDLTDQEEEDYLLD-EQMSSTDESENKEEEINM 262
Query: 130 AQD 132
D
Sbjct: 263 LDD 265
Score = 48 (22.0 bits), Expect = 6.2e-76, Sum P(3) = 6.2e-76
Identities = 21/91 (23%), Positives = 44/91 (48%)
Query: 33 FAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVERIIA 92
+ EL+ + GF+ ++ Y +V + + K++S ++ +S + I KQ + +R+
Sbjct: 80 YYELKEMKGFQDLVMY--EVKKKKKHFKVLSHSCLKY--LSNREKMKIKKQEEEEKRL-- 133
Query: 93 DRISKDSSGNVTQEYLVKWKGLSYAEATWEK 123
K S N++ V WK + + WE+
Sbjct: 134 ----KLYSKNISSYMDVFWKKIE--KLVWEE 158
Score = 47 (21.6 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 47 NYAKKVVEDVRFRKMVSREEI--ELNDVSKEMDLDIIKQNSQVERIIADRISKDS 99
N +K + R+ K + + E ++V +E D+ K N VE+ D KD+
Sbjct: 1587 NKKRKCKREKRWYKKIKKTNNPPEDSEVYRENSSDVEKYNCDVEKDNCDDEEKDN 1641
Score = 39 (18.8 bits), Expect = 9.3e-26, Sum P(3) = 9.3e-26
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 363 FKSKDDFIQNYKNLSSFNE-NELANLH 388
FKS +D+I +N NE N + H
Sbjct: 281 FKSGEDYINFMENEDDANEENVIETSH 307
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 468 (169.8 bits), Expect = 3.5e-76, Sum P(2) = 3.5e-76
Identities = 119/381 (31%), Positives = 203/381 (53%)
Query: 57 RFRKMVSREEIELNDVSKEMDLDIIKQN-SQVERIIADRISKDSSGNVTQEYLVKWKGLS 115
+ K E+ L+D EMD + ++ + R S+ S + L +
Sbjct: 102 KLAKDTKSEQKSLDDELSEMDTKTVSLKLKKLNEFV--RQSQVYSSIIADTLL--HRSNE 157
Query: 116 YAEATWEKDEIIDFAQDAIDEYKAREAAMAE----QGKMVDLQRKKGKASLRKLDEQPEW 171
A A + + D + + + K ++ ++ + Q K D + G + +QP
Sbjct: 158 VANANTKDNSNSDDEEHSSKKRKTKKKSITDFFKKQKKNEDTTTQNGAPDDAAI-KQPRL 216
Query: 172 LRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLV 231
L+ L+ YQLEGLN+L+ + N N ILADEMGLGKTVQS+++L F+ GPFLV
Sbjct: 217 LKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIYE-MDTKGPFLV 275
Query: 232 VVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTY 291
PLSTL NW EF K+ P + V+ Y GT +E + + + + G I ++T+Y
Sbjct: 276 TAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGTGI----VITSY 331
Query: 292 EVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEEL 351
E++L+D ++ W +L+VDE HRLKN +L L + +T N+LL+TGTPLQN++ EL
Sbjct: 332 EIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAEL 391
Query: 352 WALLHFLDHDKFKSKDDFIQNYK----NLSSFNENELAN--LHMELRPHILRRIIKDVEK 405
W+LL+F+ D F + F + + NL S + +E N ++ EL+ +++ + ++
Sbjct: 392 WSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKP 451
Query: 406 SLPPKIERILRVEMSPLQKQY 426
L ++++++ + P +++Y
Sbjct: 452 FLLRRLKKVVLANILPPKREY 472
Score = 387 (141.3 bits), Expect = 3.5e-76, Sum P(2) = 3.5e-76
Identities = 87/195 (44%), Positives = 118/195 (60%)
Query: 449 LLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLVILDKLLVRLHET 508
L N++++L++ + FLF Y D + LE ++ +SGKL IL KL+ L
Sbjct: 566 LQNMMMQLRQIIDSTFLF------YFPYLHPEDLT-LETLLKTSGKLQILQKLIPPLISE 618
Query: 509 KHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLS 568
H+VLI+SQ V MLD++ ++ F R+DGS E R ++ FN+ + FLLS
Sbjct: 619 GHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLS 678
Query: 569 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 628
TRA GLGINL ADTV++FDSDWNPQ DLQAM R HRIGQ+ V +YR ++E IL
Sbjct: 679 TRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVIL 738
Query: 629 ERAKKKMVLDHLVIQ 643
RA K L+ +VIQ
Sbjct: 739 TRAANKRNLERMVIQ 753
Score = 312 (114.9 bits), Expect = 4.8e-60, Sum P(3) = 4.8e-60
Identities = 90/281 (32%), Positives = 143/281 (50%)
Query: 167 EQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIP 226
+QP L+ L+ YQLEGLN+L+ + N N ILADEMGLGKTVQS+++L F+
Sbjct: 212 KQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIYE-MDTK 270
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPI---K 283
GPFLV PLSTL NW EF K+ P + V+ Y GT +E + + + + G I
Sbjct: 271 GPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGTGIVITS 330
Query: 284 FNTLLTTYEVVLKD--KAVL----SKIK-WNYLMVDEAHRLKNSEAQLYTTLSEFSTKNK 336
+ +L ++++ K ++ ++K N ++ E ++ S L T +N
Sbjct: 331 YEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTP---LQNN 387
Query: 337 LLITGTPLQNSVEELWALLH----FLDHDKFK----SKDDFIQNYKNLSSFNENELANLH 388
L + L + +++A + D D S + + N +N ++NLH
Sbjct: 388 LAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLIN-DELQKNLISNLH 446
Query: 389 MELRPHILRRIIKDVEKS-LPPKIERILRVEMSPLQKQYYK 428
L+P +LRR+ K V + LPPK E I+ M+ Q+++YK
Sbjct: 447 TILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYK 487
Score = 56 (24.8 bits), Expect = 4.8e-60, Sum P(3) = 4.8e-60
Identities = 30/132 (22%), Positives = 58/132 (43%)
Query: 73 SKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDFAQD 132
++ M + + +V + AD IS DS ++ E KG + W +D++
Sbjct: 25 TRNMSNGVNYREKEVNDLTAD-IS-DSDSDLDSEDNKHGKGDNDTAPIWLQDDVHSDEDI 82
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
+D + A Q ++VD K K+ + LD++ + K +L+ LN V
Sbjct: 83 QLDSEDDSDTE-AVQAQVVDKLAKDTKSEQKSLDDELSEM-DTKTVSLKLKKLNEFVRQS 140
Query: 193 RNDTNVILADEM 204
+ +++I AD +
Sbjct: 141 QVYSSII-ADTL 151
Score = 37 (18.1 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 437 DLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSINDTSKLERIILSSGKLV 496
DL R +++ + V+ + CC++ + +H T + LER+++ GK
Sbjct: 706 DLQAMDRCHRIGQESPVIVYRLCCDN-----TIEHVIL--TRAANKRNLERMVIQMGKFN 758
Query: 497 ILDKL 501
L KL
Sbjct: 759 NLKKL 763
>UNIPROTKB|F1P0A4 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
ArrayExpress:F1P0A4 Uniprot:F1P0A4
Length = 469
Score = 758 (271.9 bits), Expect = 3.0e-74, P = 3.0e-74
Identities = 146/341 (42%), Positives = 227/341 (66%)
Query: 133 AIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSW 192
++ +Y+ R E +++ K R +E P +++ GKLRDYQ+ GLN+L++ +
Sbjct: 122 SVGDYRHRRTEQEEDEELLTESSKTTNVCTR-FEESPSYVKWGKLRDYQVRGLNWLISLY 180
Query: 193 RNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTM 252
N N ILADEMGLGKT+Q++S+LG++++ + IPGP +V+VP STL NW EF++W+PT+
Sbjct: 181 ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTL 240
Query: 253 NVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVLSKIKWNYLMVD 312
+ +G + R F D V P +++ +T+YE+++K+K+V K W YL++D
Sbjct: 241 RAVCLIGDKDQRAA-----FVRD--VLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVID 293
Query: 313 EAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHDKFKSKDDFIQN 372
EAHR+KN +++L + EF T N+LL+TGTPLQN++ ELWALL+FL D F S +DF
Sbjct: 294 EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSW 353
Query: 373 YKNLSSFNENELAN-LHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWIL 431
+ + + +L LHM LRP +LRRI DVEKSLPPK E + V +S +Q+++Y IL
Sbjct: 354 FDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL 413
Query: 432 ERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHG 472
++ LN + +++ LLNI+++L+KCCNHP+LF+ A+ G
Sbjct: 414 MKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPG 454
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 477 (173.0 bits), Expect = 3.2e-74, Sum P(3) = 3.2e-74
Identities = 130/392 (33%), Positives = 212/392 (54%)
Query: 111 WKGLSYA-EATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQP 169
W L E+ +++++AQ+ I++ A +++ MV + +K ++ + EQP
Sbjct: 222 WSDLRQKLESIRMSGDLLNYAQELINKQNTVAAILSKCNNMVS-RLEKAISNGAGIVEQP 280
Query: 170 EWLRGG-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGP 228
+ L G +L DYQ+ GLN+L + + N ILADEMGLGKT+Q ++ L +L+
Sbjct: 281 KLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLSQAA 340
Query: 229 FLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLL 288
L+VVP STL NW E +W P + V Y G++ R + F D G F+ LL
Sbjct: 341 HLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRG-RFAKDGFTG----FDVLL 395
Query: 289 TTYEVV---LKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQ 345
TTY +V +++ + K +Y++ DEAH LKN Q Y L + + ++L+TGTPLQ
Sbjct: 396 TTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQ 455
Query: 346 NSVEELWALLHFLDHDKF-KSKDD----FIQNYKN------LSSFNENELANLHMELRPH 394
N++ EL +LL F+ F KS +D F + K+ +S F E ++ ++P
Sbjct: 456 NNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPF 515
Query: 395 ILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKG--VRGNQVSLLNI 452
+LRR+ KDV K+LP K+ + +V MS QK YY +++ ++ NKG ++ + + I
Sbjct: 516 VLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVD--YYSNNKGEVCSSSERAGIAI 573
Query: 453 VVELKKCCNHPFLFESADHGYGGDTSINDTSK 484
++E+++ NHP L H Y D ++ SK
Sbjct: 574 MMEMRRIANHPLLMR---H-YFTDANLRGFSK 601
Score = 365 (133.5 bits), Expect = 3.2e-74, Sum P(3) = 3.2e-74
Identities = 89/216 (41%), Positives = 120/216 (55%)
Query: 430 ILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFES----AD---HGYGGDTSINDT 482
++ F D N +RG L N KK N ++FE +D + D
Sbjct: 586 LMRHYFTDAN--LRGFSKRLAN-ASSFKKT-NEQYIFEELAVMSDFQVYQMMNKHEFYDV 641
Query: 483 SKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
+ +I SGK + LD LL +L HRVL+FSQ MLDI+ EY+ + F F RLDG+
Sbjct: 642 KIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGA 701
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
T +R + FN S F FLLST+AGG+GINL ADT +I D D+NP ND QA R
Sbjct: 702 TAVNVRQDLITDFNGDDSI-FVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDR 760
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLD 638
HR+GQQ V IYR ++ ++EE IL A++K+ L+
Sbjct: 761 CHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLE 796
Score = 40 (19.1 bits), Expect = 3.2e-74, Sum P(3) = 3.2e-74
Identities = 23/96 (23%), Positives = 43/96 (44%)
Query: 4 LFDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVR-FRKMV 62
++DS+ +EM K GQ Q+ + A L L K + + DVR F
Sbjct: 166 VYDSDDSDSEMS--TKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWS 223
Query: 63 S-REEIELNDVSKEMDLDIIKQNSQVERIIADRISK 97
R+++E +S ++ L+ ++ + +A +SK
Sbjct: 224 DLRQKLESIRMSGDL-LNYAQELINKQNTVAAILSK 258
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 514 (186.0 bits), Expect = 1.4e-72, Sum P(3) = 1.4e-72
Identities = 132/403 (32%), Positives = 221/403 (54%)
Query: 50 KKVVEDVRFRKMVSREEIELNDVSKE-MDLDIIKQNSQVERIIADRISKDSSGNVTQEYL 108
K ++ED + + IE++D +E ++ ++Q QVE++ + ++ + E
Sbjct: 408 KIIIEDDSETEDEKSQIIEIDDEKEEEKQVEQVEQVEQVEQVEQEEGEEEEEEEIESEPT 467
Query: 109 VKWKGLSYAEATWEKD--EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKAS----- 161
++ L YA + K EI+ A+D+ A + + KK K +
Sbjct: 468 IE--RLIYACECFSKRMLEILSNAEDSTINTTTTAATTSTTTTTTIINNKKDKKNNNNGP 525
Query: 162 --LRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFL 219
KL QP+ + +R+YQL GLN++ ++ N ILADEMGLGKTVQ++S+L +
Sbjct: 526 TFSHKLVAQPKIINK-VMRNYQLIGLNWMAVLYKEKINGILADEMGLGKTVQTISLLAHI 584
Query: 220 QNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVG 279
+ A GP LVVVP + L+NW +EF+ W P+++++ Y G RE + YE K+ G
Sbjct: 585 KEAYNDNGPHLVVVPATILANWEREFQTWCPSLSIVRYYGNLREREELR-YEL-KKKRPG 642
Query: 280 RPIKFNTLLTTYEVVL--KDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKL 337
+ FN +LTTY ++ D+ L + +++L++DEA +KNS+++ Y + + ++L
Sbjct: 643 KD--FNVILTTYNLLFANNDRGFLKRFDYSFLILDEAQNIKNSDSKRYKNIFKIGAHHRL 700
Query: 338 LITGTPLQNSVEELWALLHFLDHDKFKS--KDDFIQNYKNLSSFN----ENELANLHMEL 391
L+TGTPLQN++ ELW+LL+FL F S KD+++ N L +N ++ + + L
Sbjct: 701 LLTGTPLQNNLYELWSLLNFLMPHIFGSVKKDNYLLN--QLLEYNGDDCDSAITRMKKIL 758
Query: 392 RPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 434
P ILRR+ V K L PKIE + ++ Q + YK I+ER+
Sbjct: 759 SPFILRRLKSTVSKELKPKIEHVEICKLPKFQDETYKNIIERS 801
Score = 307 (113.1 bits), Expect = 1.4e-72, Sum P(3) = 1.4e-72
Identities = 69/160 (43%), Positives = 101/160 (63%)
Query: 486 ERIILSSGKLVILDKLLVR-LHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTK 544
E+ I +S K + L ++L + + K +VLIFSQM R+LDIL + + G+ F RLDGST
Sbjct: 977 EQFIETSTKCLKLKEILAKEIGVNKSKVLIFSQMTRVLDILEDVLDIFGYNFTRLDGSTP 1036
Query: 545 AELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 604
R +DHF++ + FLLST +GGLGINL A+ VI +D +NPQ D QA RAH
Sbjct: 1037 VNERQSIIDHFSSKETIPV-FLLSTNSGGLGINLTCANVVIFYDLSFNPQVDRQAEDRAH 1095
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK 644
R+GQ+ V IY+ + +V+ +I E A +K L+ V+++
Sbjct: 1096 RLGQEREVIIYKLLAENTVDINIHESANQKKKLNDNVLEE 1135
Score = 55 (24.4 bits), Expect = 1.4e-72, Sum P(3) = 1.4e-72
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 446 QVSLLNIVVELKKCCNHPFLFESADHGYGGDTSIND 481
Q L NI+++L+K NHP L ++ + D I D
Sbjct: 892 QFVLNNILMQLRKAANHPLLCKNI---FYNDNQIQD 924
Score = 53 (23.7 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 24/104 (23%), Positives = 46/104 (44%)
Query: 70 NDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKDEIIDF 129
N+ K + KQ+S ++ S SS N + K K E E+DE +
Sbjct: 64 NNTKKTTTVTNTKQSSTQSLKSNNKKSSTSSNNKKSSPIKKKKQSKKVEED-EEDEDEED 122
Query: 130 AQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQPEWLR 173
+D DE+ ++ ++ K Q+++ + S + L+E + L+
Sbjct: 123 EEDDEDEFNLPNVSVEQRKKK---QKQQEQESSKLLEETEKLLK 163
Score = 44 (20.5 bits), Expect = 4.4e-45, Sum P(3) = 4.4e-45
Identities = 24/82 (29%), Positives = 32/82 (39%)
Query: 1052 VNFQTTKDRFHKPQRVEQPLTKEEGEMSDNEEVYEQFKEVKWME------WCEDVMADEI 1105
VN TKD+ R + P KE + D Y+ FK V E W D E
Sbjct: 926 VNHLATKDKDWSDYRNDIPSLKE---LFDTYSDYDVFKTVCEHEDLGDKYWIPDEQFIET 982
Query: 1106 RT-LQRLQRLQATSDNLPKEKV 1126
T +L+ + A + K KV
Sbjct: 983 STKCLKLKEILAKEIGVNKSKV 1004
Score = 41 (19.5 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 768 ERSNKRKKKGSELQEPQERVHKRRK 792
E+ K K+K S + + K+RK
Sbjct: 816 EKEEKEKEKQSLINSSNSSIKKKRK 840
Score = 38 (18.4 bits), Expect = 2.6e-43, Sum P(3) = 2.6e-43
Identities = 14/79 (17%), Positives = 38/79 (48%)
Query: 605 RIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGSWRRKKQRKGNELSA 664
+I E+ + +F ++I+ER+K + L + ++ K E + K+ + S+
Sbjct: 777 KIEHVEICKLPKF--QDETYKNIIERSKSQWKLRNELLLKKEKEEKEKEKQSLINSSNSS 834
Query: 665 ILRFG-AEELFKEDRNDEE 682
I + ++K ++ +++
Sbjct: 835 IKKKRKTSSIYKNNKIEKD 853
>UNIPROTKB|I3LDG1 [details] [associations]
symbol:LOC100738357 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00560000077077 EMBL:FP236283
Ensembl:ENSSSCT00000031310 OMA:ENWRTEL Uniprot:I3LDG1
Length = 323
Score = 735 (263.8 bits), Expect = 9.2e-72, P = 9.2e-72
Identities = 152/316 (48%), Positives = 215/316 (68%)
Query: 293 VVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELW 352
++L D L KI W+ +++DEAHRLKN +L L + ++K+L+TGTPLQNSVEEL+
Sbjct: 1 MILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 60
Query: 353 ALLHFLDHDKFKSKDDFIQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIE 412
+LL+FL+ +F S+ F++ + +L + E ++ L L+P +LRR+ DVEK+L PK E
Sbjct: 61 SLLNFLEPSQFPSETAFLEEFGDLKT--EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQE 118
Query: 413 RILRVEMSPLQKQYYKWILERNFHDLNKGV-RGNQVSLLNIVVELKKCCNHPFLFESADH 471
I+ VE++ +QK+YY+ ILE+NF L KG + N +L+N ++EL+KCCNHP+L A+
Sbjct: 119 TIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEE 178
Query: 472 GYGGD---TSINDTS--KLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILA 526
D T D +L+ +I ++GKLV++DKLL +L H+VLIFSQMVR LDIL
Sbjct: 179 KILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILE 238
Query: 527 EYMSYKGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVII 586
+Y+ + + ++R+DG + LR A+D F P S+ F FLL TRAGGLGINL ADT II
Sbjct: 239 DYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCII 298
Query: 587 FDSDWNPQNDLQAMSR 602
FDSDWNPQNDLQ R
Sbjct: 299 FDSDWNPQNDLQVTIR 314
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 480 (174.0 bits), Expect = 5.3e-70, Sum P(3) = 5.3e-70
Identities = 113/308 (36%), Positives = 175/308 (56%)
Query: 168 QPEWLRGG-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIP 226
QPE L +L+ YQL GLN+LV +N + ILADEMGLGKT+Q++S L L
Sbjct: 419 QPEILSSTFQLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEGN-H 477
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNT 286
GP L+ VP STL NW +E W P+ V+VY G+ R+ +YE N + +++N
Sbjct: 478 GPHLITVPASTLDNWVRELNLWCPSFKVLVYYGSADDRKY-MRYEILN-----QIVEYNI 531
Query: 287 LLTTYEVVL---KDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 343
+++TY + + D+++ K+K Y + DE H LKN + Y L + K +LL+TGTP
Sbjct: 532 IVSTYNLAIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTP 591
Query: 344 LQNSVEELWALLHFLDHDKFKSKDDFI------QNYKNLSSFNENELANLHMELRPHILR 397
LQN++ EL +LL+F+ + F S I ++ + SSF + + + + ++P ILR
Sbjct: 592 LQNNLLELMSLLNFIMPNMFSSSTSQIAKMFSMKSSEEQSSFERDRITHAKLIMKPFILR 651
Query: 398 RIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELK 457
R+ +V K LP K E++ MS Q++ Y +L + H N G + L N++++L+
Sbjct: 652 RVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHKLKHSSN----GEKRELTNVMMQLR 707
Query: 458 KCCNHPFL 465
K NHP L
Sbjct: 708 KMSNHPLL 715
Score = 320 (117.7 bits), Expect = 5.3e-70, Sum P(3) = 5.3e-70
Identities = 67/151 (44%), Positives = 96/151 (63%)
Query: 488 IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAEL 547
++L SGKL +L +LL L E RV++FSQ MLDIL ++ + ++ RLDGST
Sbjct: 777 VLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSD 836
Query: 548 RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 607
R +D FN + F FLLSTRAGGLGINL +A+ VI+ D D NP ND QA R HR+G
Sbjct: 837 RIGLIDQFNTD-QDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVG 895
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLD 638
Q + V + + ++ S+E+ +L ++K+ L+
Sbjct: 896 QTKTVKVIKLISKDSIEDTMLRIGERKLKLE 926
Score = 47 (21.6 bits), Expect = 5.3e-70, Sum P(3) = 5.3e-70
Identities = 18/84 (21%), Positives = 42/84 (50%)
Query: 109 VKWKGLSYAEATWEK--DEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLD 166
+K G++ A++ ++ ++ +Q++ D K + A+ + + K + LRKL
Sbjct: 127 LKTSGMAAADSVQQRRRQQMCGSSQES-DSRKGGRVSAADDSEEEGQRSKDQERMLRKLQ 185
Query: 167 EQPEWLRGGKLRDYQLEGLNFLVN 190
+ L +LRD L+ ++L++
Sbjct: 186 RKFPHLNKNELRDV-LQEHDWLID 208
Score = 45 (20.9 bits), Expect = 2.9e-41, Sum P(3) = 2.9e-41
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHR 511
K +R++L S ++LD L V L KHR
Sbjct: 797 KGDRVVLFSQFTMMLDILEVFLRHHKHR 824
Score = 42 (19.8 bits), Expect = 1.8e-69, Sum P(3) = 1.8e-69
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 153 LQRKKGKASLRKLDEQPE 170
++RKKG AS +E PE
Sbjct: 1 MRRKKGPASSSDHEEPPE 18
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 484 (175.4 bits), Expect = 6.6e-70, Sum P(5) = 6.6e-70
Identities = 113/309 (36%), Positives = 180/309 (58%)
Query: 167 EQPEWLRGG-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQI 225
+QP+ L KL+ YQL GL +L+ ++ + ILADEMGLGKT+Q+++ L L + I
Sbjct: 437 KQPKVLNSNLKLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHLYE-KGI 495
Query: 226 PGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFN 285
GP L+ VP STL NW +E W P++ V++Y G+ R+ +Q D G I FN
Sbjct: 496 KGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQ-----DILTGL-IDFN 549
Query: 286 TLLTTYEVVL---KDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGT 342
+++TY + + D+++ K+K Y + DE H LKN + Y L + +++LL+TGT
Sbjct: 550 IIVSTYNLTIGNDHDRSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINAEHRLLLTGT 609
Query: 343 PLQNSVEELWALLHFLDHDKFKSKDDFI------QNYKNLSSFNENELANLHMELRPHIL 396
PLQN++ EL +LL+F+ F S I ++ + SSF+++ +A + ++P IL
Sbjct: 610 PLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTRSSEEESSFHKDRIAQARLIMKPFIL 669
Query: 397 RRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVEL 456
RR+ +V K LPPK+E+I MS Q + Y + +R L K G++ L N++++L
Sbjct: 670 RRVKSEVLKELPPKMEKIEMCPMSDAQHKLYDILFKR----LKKTPNGDKRELCNVMMQL 725
Query: 457 KKCCNHPFL 465
+K NHP L
Sbjct: 726 RKMANHPLL 734
Score = 316 (116.3 bits), Expect = 6.6e-70, Sum P(5) = 6.6e-70
Identities = 70/156 (44%), Positives = 98/156 (62%)
Query: 484 KLER-IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGS 542
+LE+ +IL SGK +L K L +L E RV++FSQ MLDI+ + + Q+ RLDGS
Sbjct: 791 QLEKALILDSGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGS 850
Query: 543 TKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSR 602
T R +D +N E F FLLSTRAGG GINLA+A+TVI+ D D NP ND QA R
Sbjct: 851 TPMAERIGLIDKYNT-NPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDR 909
Query: 603 AHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLD 638
HR+GQ V + + ++ S+E+ +L ++K+ L+
Sbjct: 910 CHRMGQTRTVQVIKLISKDSIEDCMLRVGQEKLKLE 945
Score = 55 (24.4 bits), Expect = 6.6e-70, Sum P(5) = 6.6e-70
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 35 ELQNLSGFKKVLN-YAKKVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVERIIAD 93
E+ ++S K + +K ++ F++ +E+ LNDVS D D I +S V+ + D
Sbjct: 268 EVSSMSALKTQKSALSKSTSKNSSFKRKRG-DEMPLNDVSASEDEDEI--DSDVDSMSDD 324
Query: 94 RISKD--SSGNVTQEYLVKW 111
+ S+D S Q+ ++++
Sbjct: 325 QDSEDEDSISGTLQDKIIQF 344
Score = 40 (19.1 bits), Expect = 6.6e-70, Sum P(5) = 6.6e-70
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 123 KDEIIDFAQDA-IDE 136
+D+II F QDA +DE
Sbjct: 338 QDKIIQFLQDASLDE 352
Score = 40 (19.1 bits), Expect = 2.7e-68, Sum P(5) = 2.7e-68
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 68 ELNDVSKEMDLDIIKQNS-QVERIIADRI---SKDSSGNVTQEYLVKWKGLSYAEAT 120
+L D+ KE+ DI+K++ E + + S D+S Q+ K K E T
Sbjct: 186 KLPDIEKEVLRDILKEHDWDYENALGSLLVFSSTDTSSPENQKSKQKSKSSHSKEKT 242
Score = 37 (18.1 bits), Expect = 6.6e-70, Sum P(5) = 6.6e-70
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 1066 RVEQPLTKEEGEMSDNEEVYEQFKEV 1091
++EQ +T +EGE + + EQ E+
Sbjct: 943 KLEQDMTTDEGE---DGAITEQMAEL 965
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 428 (155.7 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 102/267 (38%), Positives = 150/267 (56%)
Query: 177 LRDYQLEGLNFLVNSWRNDTN-VILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPL 235
L+ YQL G+NFL+ ++ ILADEMGLGKT+Q+++ L L PGP LVV P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 236 STLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVL 295
S L NW +E RKW P+ V+ Y G A+R + E + K G+P FN LL Y +
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHG--AARAAYSR-ELNSLSKAGKPPPFNVLLVCYSLFE 329
Query: 296 K-------DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFS--TKNKLLITGTPLQN 346
+ D+ VL + +W+ +++DEAH LK+ + + L + +L++TGTPLQN
Sbjct: 330 RHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 389
Query: 347 SVEELWALLHFLDHDKFKSKDDFIQNYKNLSSFNENEL-ANLHMELRPHILRRIIKDVEK 405
+ ELW+LL F+ D F +++ + K L + + EL + L P ILRR+ DV +
Sbjct: 390 DLHELWSLLEFMLPDIFTTEN---VDLKKLLNAEDTELITRMKSILGPFILRRLKSDVMQ 446
Query: 406 SLPPKIERILRVEMSPLQKQYYKWILE 432
L PKI+R+ V M Q+ YK +E
Sbjct: 447 QLVPKIQRVEYVLMERKQEDAYKEAIE 473
Score = 363 (132.8 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 97/242 (40%), Positives = 139/242 (57%)
Query: 431 LERNFHDLNKGVRGNQVSLLNIVVELKKCCN---HPFLFESADHGYGGDTSINDTSKL-- 485
+ R H + G G + SL ++ E+K + H LF+ YG +NDT
Sbjct: 532 IARKLHPI--GAFGFECSLDRVIEEVKGFNDFRIHQLLFQ-----YG----VNDTKGTLS 580
Query: 486 ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKA 545
++ ++ S K L +LL + ++ HRVLIFSQ MLDIL + G ++RLDGST+
Sbjct: 581 DKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQV 640
Query: 546 ELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR 605
R +D FN S C LLSTRAGG G+NL ADTVII D D+NPQ D QA R HR
Sbjct: 641 TDRQTIVDTFNNDKSIFAC-LLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHR 699
Query: 606 IGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQK-LNAEGSWRRKKQRKGNELSA 664
IGQ + V I+R VT +V+E+I E AK+K+VLD V++ ++ + + ++ G L++
Sbjct: 700 IGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLESGVHVDDNGDTPEKTMGEILAS 759
Query: 665 IL 666
+L
Sbjct: 760 LL 761
Score = 222 (83.2 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 65/210 (30%), Positives = 103/210 (49%)
Query: 297 DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFS--TKNKLLITGTPLQNSVEELWAL 354
D+ VL + +W+ +++DEAH LK+ + + L + +L++TGTPLQN + ELW+L
Sbjct: 338 DRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSL 397
Query: 355 LHFLDHDKFKSKDDFIQNYKNLSSFNENEL-ANLHMELRPHILRRIIKDVEKSLPPKIER 413
L F+ D F +++ + K L + + EL + L P ILRR+ DV + L PKI+R
Sbjct: 398 LEFMLPDIFTTEN---VDLKKLLNAEDTELITRMKSILGPFILRRLKSDVMQQLVPKIQR 454
Query: 414 ILRVEMSPLQKQYYKWILE---------------RNFHDLNKGVRGNQVSLLNIVVELKK 458
+ V M Q+ YK +E ++ + L K + Q+S N + +K
Sbjct: 455 VEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQIS--NYFTQFRK 512
Query: 459 CCNHPFLFESADHGYGGDTSINDTSKLERI 488
NHP L Y + I KL I
Sbjct: 513 IANHPLLIRRI---YSDEDVIRIARKLHPI 539
Score = 57 (25.1 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 65 EEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWKGLSYAEATWEKD 124
E ++L + D ++I ++++ I+ I + +V Q+ + K + + Y K
Sbjct: 409 ENVDLKKLLNAEDTELI---TRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVLME-RKQ 464
Query: 125 EIIDFAQDAIDEYKAREAAMAEQGKMVDLQRK 156
E D ++AI+EY+A A Q ++V L K
Sbjct: 465 E--DAYKEAIEEYRA-----ASQARLVKLSSK 489
Score = 42 (19.8 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 899 INRVEELQLLAKRISRYEDPIKQFRVLS 926
I RVE + + K+ Y++ I+++R S
Sbjct: 452 IQRVEYVLMERKQEDAYKEAIEEYRAAS 479
Score = 40 (19.1 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 1086 EQFKEVKWMEWCEDVMADEIRTLQRL--QRLQATSDNLPKEKVASVFPSF 1133
E+ +E + E E+ A L +L + L + + LPK ++++ F F
Sbjct: 461 ERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQISNYFTQF 510
Score = 39 (18.8 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 19/90 (21%), Positives = 40/90 (44%)
Query: 23 QSHLHCQWKSFAELQNLSGFKKVLNYAKKVVEDVRFRKMVSREEIELND-VSKEMDLDII 81
Q+ LH W S E L N K + + ++++R + L + + + D++
Sbjct: 388 QNDLHELW-SLLEFM-LPDIFTTENVDLKKLLNAEDTELITRMKSILGPFILRRLKSDVM 445
Query: 82 KQN----SQVERIIADRISKDSSGNVTQEY 107
+Q +VE ++ +R +D+ +EY
Sbjct: 446 QQLVPKIQRVEYVLMERKQEDAYKEAIEEY 475
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 479 (173.7 bits), Expect = 8.0e-69, Sum P(2) = 8.0e-69
Identities = 149/453 (32%), Positives = 230/453 (50%)
Query: 51 KVVEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQ--VERIIADRISKDSSGNVTQEYL 108
+VVE V K++S L D S +L +I Q S+ V++IIA R +S +
Sbjct: 314 EVVESVYKSKILSF----LQDASPS-ELTMIPQCSEKKVQKIIALR--PFNSWEALLSKI 366
Query: 109 VKWKGLSYAEATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLDEQ 168
K GLS + W ++ + E + K V + G R EQ
Sbjct: 367 TKTAGLS-EDIVWNCKTLLKERDVVLKLMNKCEEISNKLTKQVTKITEDG--GCRWNIEQ 423
Query: 169 PEWLRGG-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFL-QNAQQIP 226
P L +L+ YQ GLN+L ++ N ILADEMGLGKT+Q+++ L + Q +
Sbjct: 424 PSVLNQSLELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFLAHIYQEGDR-- 481
Query: 227 GPFLVVVPLSTLSNWAKEFRKWLPTMNVIVY-VGTRASREVCQQYEFYNDKKVGRPIKFN 285
GP L+VVP STL NW +E W P +NV+ Y VG++ R+ + + N R + FN
Sbjct: 482 GPHLIVVPASTLDNWIREVNLWCPELNVLFYYVGSQEDRKHLRA-DISN-----RVVDFN 535
Query: 286 TLLTTYEVVLK---DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGT 342
++TTY + D+++ K+K NY + DE H LKN + Y L + K++LL+TGT
Sbjct: 536 VIVTTYNCAISSSDDRSLFRKVKLNYAIFDEGHMLKNMSSVRYQQLMRINAKHRLLLTGT 595
Query: 343 PLQNSVEELWALLHFLDHDKFKSKDDFIQNY--------KNLSSFNENELANLHMELRPH 394
P+QN++ EL +LL+F+ F S I+ + S++ + +A+ ++P
Sbjct: 596 PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKAKTAEEQSTYEKERIAHAKQIIKPF 655
Query: 395 ILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVS--LLNI 452
ILRR+ +V K LPPK + I MS Q+Q Y +L + L K ++GN+ + + N
Sbjct: 656 ILRRVKDEVLKQLPPKKDHIELCAMSEKQEQLYCDLLNK----LKKTMKGNEKNSDMGNA 711
Query: 453 VVELKKCCNHPFLFESADHGYGGDTSINDTSKL 485
+++L+K NHP L H Y D + SKL
Sbjct: 712 MMQLRKMANHPLLHR---HYYTAD-KLKTMSKL 740
Score = 309 (113.8 bits), Expect = 8.0e-69, Sum P(2) = 8.0e-69
Identities = 67/163 (41%), Positives = 100/163 (61%)
Query: 489 ILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELR 548
IL SGK +L++LL L E RV++FSQ +LDIL ++ + ++ RLDG T+ R
Sbjct: 787 ILDSGKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFLKHWQHRYIRLDGKTQISDR 846
Query: 549 HQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQ 608
+D FN + F FLLST+AGGLGINL +A+ VI+ D D NP ND QA R HR+GQ
Sbjct: 847 IHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQ 905
Query: 609 QEVVNIYRFVTSKSVEEDILERAKKKMVLDH-LVIQKLNAEGS 650
V + + ++ ++EE +L+ ++K+ L+ + L EG+
Sbjct: 906 TREVKVIKLISKGTIEESMLKMNQQKLKLEQDMTAADLGEEGA 948
Score = 43 (20.2 bits), Expect = 7.7e-41, Sum P(2) = 7.7e-41
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVL 513
K +R++L S ++LD L V L +HR +
Sbjct: 806 KGDRVVLFSQFTMVLDILEVFLKHWQHRYI 835
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 444 (161.4 bits), Expect = 1.2e-68, Sum P(3) = 1.2e-68
Identities = 135/437 (30%), Positives = 216/437 (49%)
Query: 53 VEDVRFRKMVSREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQEYLVKWK 112
+E+ R ++ ++ + E + + + + Q +++ IAD + + + + K K
Sbjct: 276 IEERRAKRGETKNQKECREFFNKAKKEDLLQQARINDKIADFVLANRPFEIYGAMVAKMK 335
Query: 113 GLSYA----EATWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQR-KKGKASLRKLDE 167
G++ EA E E +D+ K + + D +R +G L L E
Sbjct: 336 GVTRGTNAIEAYMEFLEKRGILSRILDDCKDHAHTVTK-----DFERCTEGPLQLPLLKE 390
Query: 168 QPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPG 227
G L DYQL G+ +L+ + D N IL DEMGLGKT+Q V+ L +L+ + G
Sbjct: 391 ------GCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQIGKT-G 443
Query: 228 PFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTL 287
P L+VVP ST+ NW EF KW P++ ++ Y G++ R+ + + KK I + +
Sbjct: 444 PHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLR----HRVKKQKDHI--DVI 497
Query: 288 LTTYEVVLK---DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPL 344
LTTY +V DK NY++ DE H LKN +++ Y L + K K+L+TGTPL
Sbjct: 498 LTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPL 557
Query: 345 QNSVEELWALLHFLDHDKF-KSKDDF---IQNYKNLSS---------FNENELANLHMEL 391
QN++ EL +L++F+ F K +D +Q++K L + ++ + L
Sbjct: 558 QNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAIL 617
Query: 392 RPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLN 451
+P+ILRR+ V SLP K E+I+ VEM QKQ Y I+E G + SL+
Sbjct: 618 QPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEALQQSEESG--DSYGSLMR 675
Query: 452 IVVELKKCCNHPFLFES 468
L++ NHP L S
Sbjct: 676 ----LRQAANHPLLRRS 688
Score = 349 (127.9 bits), Expect = 1.2e-68, Sum P(3) = 1.2e-68
Identities = 82/187 (43%), Positives = 116/187 (62%)
Query: 482 TSKL---ERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQR 538
TSK E++ L SGK LD +L + + +VLIFSQ MLDIL Y++ +G+ ++R
Sbjct: 739 TSKFLLNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKR 798
Query: 539 LDGSTKAELRHQAMDHFNAPGSED-FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 597
LDG T R + ++ FN S+D F FLLSTRAGGLGINL +A+ +II D D+NP ND
Sbjct: 799 LDGQTPVLDRQEMINEFNL--SKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDK 856
Query: 598 QAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNA---EGSWRRK 654
QA R HR+GQ++ V++ R V+ +VE +L AKKK+ L+ V + E + R
Sbjct: 857 QAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVTDGVKGQLDEDALREL 916
Query: 655 KQRKGNE 661
K+ +G E
Sbjct: 917 KEEEGGE 923
Score = 45 (20.9 bits), Expect = 1.2e-68, Sum P(3) = 1.2e-68
Identities = 13/59 (22%), Positives = 30/59 (50%)
Query: 1024 GREKSENILNMPISRLKRDKKGKPGSAKVNFQTTKDRFHKPQRVEQPLTKEEGEMSDNE 1082
GR+ S+ +L+ IS D + G +K + + + V++P+ KE+ + +++
Sbjct: 927 GRDLSK-LLSSAISGRYDDVEDDSGDSKNGIDAEEAAKKEDEAVKEPVEKEQQKEEESQ 984
Score = 40 (19.1 bits), Expect = 4.0e-68, Sum P(3) = 4.0e-68
Identities = 11/43 (25%), Positives = 15/43 (34%)
Query: 728 EDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPERS 770
EDD I E A+ ED + E ++P S
Sbjct: 946 EDDSGDSKNGIDAEEAAKKEDEAVKEPVEKEQQKEEESQPSTS 988
Score = 37 (18.1 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 14 MEFLIKWKGQSHLHCQWKSFAELQNLSGFKKVL 46
+ ++I +G +C + + L + G KK+L
Sbjct: 519 LNYVIYDEGHMLKNCDSERYRGLMKVKGKKKIL 551
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 433 (157.5 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 98/278 (35%), Positives = 161/278 (57%)
Query: 169 PEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGP 228
P LRG LR YQ +GLN+L + + N+TN ILADEMGLGKT+Q++S+L +L GP
Sbjct: 816 PSLLRG-TLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGP 874
Query: 229 FLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLL 288
L++VP S + NW EF+K+ P V+ Y G+ R Q+ + +N +P F+ +
Sbjct: 875 HLIIVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQR--AQKRKGWN-----KPDAFHVCI 927
Query: 289 TTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
T+Y++V++D+ + +W Y+++DEAH +KN + + L F+T+N+LL+TGTPLQN++
Sbjct: 928 TSYQLVVQDQQSFKRRRWTYMILDEAHNIKNFRSTRWRALLNFNTENRLLLTGTPLQNNL 987
Query: 349 EELWALLHFLDHDKFKSKDDFIQNYKNLSSFNE--NELANLHMELRPHILRRIIKDVEKS 406
ELW+LL+FL K + + NL F + + N +E +I + E++
Sbjct: 988 MELWSLLYFLMPSS-KVNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERT 1046
Query: 407 LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRG 444
K++ R ++ L + ++L R D+ K + G
Sbjct: 1047 TQ-KMDEETRNTVARLHQVLRPYLLRRLKKDVEKQMPG 1083
Score = 364 (133.2 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 75/152 (49%), Positives = 102/152 (67%)
Query: 493 GKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAELRHQAM 552
GKL L LL L HR LIF+QM ++LDIL ++++ G+++ RLDG+TK E R
Sbjct: 1366 GKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGATKIEDRQLLT 1425
Query: 553 DHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVV 612
+ FN F+LSTR+GGLGINL ADTVI +DSDWNP D Q R HRIGQ V
Sbjct: 1426 EKFNRDPKIPV-FILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQVRDV 1484
Query: 613 NIYRFVTSKSVEEDILERAKKKMVLDHLVIQK 644
+IYRFV+ ++E +I+++A +K LD++VIQ+
Sbjct: 1485 HIYRFVSEYTIESNIIKKANQKRQLDNVVIQE 1516
Score = 170 (64.9 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 40/104 (38%), Positives = 59/104 (56%)
Query: 368 DFI-QNYKNLSSFNE---NELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQ 423
D I +N + +E N +A LH LRP++LRR+ KDVEK +P K E I+ +S Q
Sbjct: 1038 DLIDENERTTQKMDEETRNTVARLHQVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQ 1097
Query: 424 KQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 467
+ Y + R GN +S++N +++L+K CNHP LFE
Sbjct: 1098 RFLYDDFMSRA-KTKETLASGNFLSIINCLMQLRKVCNHPDLFE 1140
Score = 47 (21.6 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 405 KSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSL 449
K +P I +LR + P QKQ W+ ++ N G+ +++ L
Sbjct: 811 KDVP--IPSLLRGTLRPYQKQGLNWLASLYNNNTN-GILADEMGL 852
Score = 39 (18.8 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 1195 NYVSTFSNLSGEKLHQIYSKLK 1216
NYVS + L E+ +I KL+
Sbjct: 1228 NYVSYYQRLRREEQAEIKEKLE 1249
Score = 37 (18.1 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 886 LDFFGVSVKANDLINRVEELQLLAKRISRYEDP 918
L+ G D ++E+ QLL ++ +R DP
Sbjct: 1402 LNIHGYRYMRLDGATKIEDRQLLTEKFNR--DP 1432
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 466 (169.1 bits), Expect = 2.4e-65, Sum P(2) = 2.4e-65
Identities = 128/426 (30%), Positives = 215/426 (50%)
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQ-EYLVKWKGL--SYAEA 119
S EE+ + D K L ++ +S E + + S+ + +T+ W+ L ++
Sbjct: 371 SCEEV-MEDGYKGKILHFLQVSSIAELTLIPKCSQKKAQKITELRPFNNWEALFTKMSKI 429
Query: 120 TWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLD-------EQPEWL 172
+++I + I E R+ + K D+ K K EQP L
Sbjct: 430 NGLSEDLIWNCKTVIQE---RDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNREQPSLL 486
Query: 173 RGG-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFL-QNAQQIPGPFL 230
L+ YQ GLN+L ++ N ILADEMGLGKT+Q+++ L +L Q + GP L
Sbjct: 487 NQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNK--GPHL 544
Query: 231 VVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTT 290
+VVP ST+ NW +E W P++NV+ Y G++ R+ + + +N + +N ++TT
Sbjct: 545 IVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIR-FNIHNKYE-----DYNVIVTT 598
Query: 291 YEVVLK---DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNS 347
Y + D+++ ++K NY + DE H LKN + Y L + +N+LL+TGTP+QN+
Sbjct: 599 YNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNN 658
Query: 348 VEELWALLHFLDHDKFKSKDDFIQNY--------KNLSSFNENELANLHMELRPHILRRI 399
+ EL +LL+F+ F S I+ S + + +A+ ++P ILRR+
Sbjct: 659 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRV 718
Query: 400 IKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKC 459
++V K LPPK +RI MS Q+Q Y + R +N + + + N++++L+K
Sbjct: 719 KEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTE--MCNVMMQLRKM 776
Query: 460 CNHPFL 465
NHP L
Sbjct: 777 ANHPLL 782
Score = 291 (107.5 bits), Expect = 2.4e-65, Sum P(2) = 2.4e-65
Identities = 63/151 (41%), Positives = 93/151 (61%)
Query: 488 IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAEL 547
+IL SGK L +L L + RV++FSQ MLDIL + + ++ RLDG T+
Sbjct: 844 LILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 903
Query: 548 RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 607
R +D FN + F FLLST+AGGLGINL +A+ VI+ D D NP ND QA R HR+G
Sbjct: 904 RIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVG 962
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLD 638
Q + V + + ++ ++EE +L+ ++K+ L+
Sbjct: 963 QTKEVLVIKLISQGTIEESMLKINQQKLKLE 993
Score = 44 (20.5 bits), Expect = 2.3e-39, Sum P(2) = 2.3e-39
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVL 513
K +R++L S ++LD L V L +HR L
Sbjct: 864 KGDRVVLFSQFTMMLDILEVLLKHHQHRYL 893
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 463 (168.0 bits), Expect = 5.2e-65, Sum P(2) = 5.2e-65
Identities = 108/312 (34%), Positives = 174/312 (55%)
Query: 167 EQPEWLRGG-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFL-QNAQQ 224
EQP L L+ YQ GLN+L ++ N ILADEMGLGKT+Q+++ L +L Q +
Sbjct: 484 EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNK 543
Query: 225 IPGPFLVVVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKF 284
GP L+VVP ST+ NW +E W PT+NV+ Y G++ R+ + + +N + +
Sbjct: 544 --GPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIR-FNIHNKYE-----DY 595
Query: 285 NTLLTTYEVVLK---DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITG 341
N ++TTY + D+++ ++K NY + DE H LKN + Y L + +N+LL+TG
Sbjct: 596 NVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTG 655
Query: 342 TPLQNSVEELWALLHFLDHDKFKSKDDFIQNY--------KNLSSFNENELANLHMELRP 393
TP+QN++ EL +LL+F+ F S I+ S + + +A+ ++P
Sbjct: 656 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKP 715
Query: 394 HILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIV 453
ILRR+ ++V K LPPK ++I MS Q+Q Y + R +N + + + N++
Sbjct: 716 FILRRVKEEVLKLLPPKKDQIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTE--MCNVM 773
Query: 454 VELKKCCNHPFL 465
++L+K NHP L
Sbjct: 774 MQLRKMANHPLL 785
Score = 291 (107.5 bits), Expect = 5.2e-65, Sum P(2) = 5.2e-65
Identities = 63/151 (41%), Positives = 93/151 (61%)
Query: 488 IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAEL 547
+IL SGK L +L L + RV++FSQ MLDIL + + ++ RLDG T+
Sbjct: 847 LILDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 906
Query: 548 RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 607
R +D FN + F FLLST+AGGLGINL +A+ VI+ D D NP ND QA R HR+G
Sbjct: 907 RIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVG 965
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLD 638
Q + V + + ++ ++EE +L+ ++K+ L+
Sbjct: 966 QTKEVLVIKLISQGTIEESMLKINQQKLKLE 996
Score = 44 (20.5 bits), Expect = 4.9e-39, Sum P(2) = 4.9e-39
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVL 513
K +R++L S ++LD L V L +HR L
Sbjct: 867 KGDRVVLFSQFTMMLDILEVLLKHHQHRYL 896
Score = 39 (18.8 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 436 HDLNKGVRGNQVSLLNIVVELK 457
HDL R N +S L + EL+
Sbjct: 133 HDLPSATRRNDISELEDLSELE 154
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 459 (166.6 bits), Expect = 5.5e-65, Sum P(2) = 5.5e-65
Identities = 127/425 (29%), Positives = 213/425 (50%)
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQ-EYLVKWKGL--SYAEA 119
S EE+ + D K L ++ S E + + S+ + +T+ W+ L ++
Sbjct: 379 SGEEV-MEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKT 437
Query: 120 TWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLD-------EQPEWL 172
+++I + I E R+ + K D+ K K EQP L
Sbjct: 438 NGLSEDLIWHCKTLIQE---RDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNIEQPSIL 494
Query: 173 RGG-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLV 231
L+ YQ GLN+L ++ N ILADEMGLGKT+Q+++ L +L GP L+
Sbjct: 495 NQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-KGPHLI 553
Query: 232 VVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTY 291
VVP ST+ NW +E W PT+ V+ Y G++ R+ + Y ++ + ++N ++TTY
Sbjct: 554 VVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR-YNIHSKYE-----EYNVIVTTY 607
Query: 292 EVVLK---DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
+ D+++ ++K NY + DE H LKN + Y L + N+LL+TGTP+QN++
Sbjct: 608 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNL 667
Query: 349 EELWALLHFLDHDKFKSKDDFIQNY---KNLSS-----FNENELANLHMELRPHILRRII 400
EL +LL+F+ F S I+ K S+ + + +A+ ++P ILRR+
Sbjct: 668 LELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVK 727
Query: 401 KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCC 460
++V K LPPK ++I MS Q+Q Y + R +N + + + N++++L+K
Sbjct: 728 EEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTE--MCNVMMQLRKMA 785
Query: 461 NHPFL 465
NHP L
Sbjct: 786 NHPLL 790
Score = 295 (108.9 bits), Expect = 5.5e-65, Sum P(2) = 5.5e-65
Identities = 63/151 (41%), Positives = 94/151 (62%)
Query: 488 IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAEL 547
+IL SGK +L +L L + RV++FSQ MLDIL + + ++ RLDG T+
Sbjct: 852 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 911
Query: 548 RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 607
R +D FN + F FLLST+AGGLGINL +A+ VI+ D D NP ND QA R HR+G
Sbjct: 912 RIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVG 970
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLD 638
Q + V + + ++ ++EE +L+ ++K+ L+
Sbjct: 971 QTKEVLVIKLISQGTIEESMLKINQQKLKLE 1001
Score = 44 (20.5 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVL 513
K +R++L S ++LD L V L +HR L
Sbjct: 872 KGDRVVLFSQFTMMLDILEVLLKHHQHRYL 901
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 461 (167.3 bits), Expect = 6.9e-65, Sum P(2) = 6.9e-65
Identities = 128/425 (30%), Positives = 211/425 (49%)
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQ-EYLVKWKGL--SYAEA 119
S EE+ + D K L ++ S E + + S+ + +T+ W+ L ++
Sbjct: 378 SGEEV-MEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKT 436
Query: 120 TWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLD-------EQPEWL 172
+++I + I E R+ + K D+ K K EQP L
Sbjct: 437 NGLSEDLIWHCKTLIQE---RDVVIKLMNKCEDISNKLTKQVTMLTGNGGGWNTEQPSIL 493
Query: 173 RGG-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLV 231
L+ YQ GLN+L ++ N ILADEMGLGKT+Q+++ L +L GP L+
Sbjct: 494 NQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-KGPHLI 552
Query: 232 VVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTY 291
VVP ST+ NW +E W PT+ V+ Y G++ R+ + Y ++ R ++N ++TTY
Sbjct: 553 VVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR-YNIHS-----RYEEYNVIVTTY 606
Query: 292 EVVLK---DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
+ D+++ ++K NY + DE H LKN + Y L + N+LL+TGTP+QN++
Sbjct: 607 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNL 666
Query: 349 EELWALLHFLDHDKFKSKDDFIQNY--------KNLSSFNENELANLHMELRPHILRRII 400
EL +LL+F+ F S I+ S + + +A+ ++P ILRR+
Sbjct: 667 LELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVK 726
Query: 401 KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCC 460
++V K LPPK +RI MS Q+Q Y + R +N + + + N++++L+K
Sbjct: 727 EEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNMEKNTE--MCNVMMQLRKMA 784
Query: 461 NHPFL 465
NHP L
Sbjct: 785 NHPLL 789
Score = 292 (107.8 bits), Expect = 6.9e-65, Sum P(2) = 6.9e-65
Identities = 63/151 (41%), Positives = 93/151 (61%)
Query: 488 IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAEL 547
+IL SGK +L +L L + RV++FSQ MLDIL + + ++ RLDG T+
Sbjct: 851 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 910
Query: 548 RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 607
R +D FN + F FLLST+AGGLGINL +A+ VI+ D D NP ND QA R HR+G
Sbjct: 911 RIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVG 969
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLD 638
Q + V + + + ++EE +L+ ++K+ L+
Sbjct: 970 QTKEVLVIKLIGQGTIEESMLKINQQKLKLE 1000
Score = 44 (20.5 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVL 513
K +R++L S ++LD L V L +HR L
Sbjct: 871 KGDRVVLFSQFTMMLDILEVLLKHHQHRYL 900
Score = 38 (18.4 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 365 SKDDFIQNYKNLSSFNENELANL 387
S+D+ Q +++ N N++ NL
Sbjct: 127 SEDEESQGLPTMATRNNNDITNL 149
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 458 (166.3 bits), Expect = 7.0e-65, Sum P(2) = 7.0e-65
Identities = 127/425 (29%), Positives = 213/425 (50%)
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQ-EYLVKWKGL--SYAEA 119
S EE+ + D K L ++ S E + + S+ + +T+ W+ L ++
Sbjct: 376 SGEEV-MEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKT 434
Query: 120 TWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLD-------EQPEWL 172
+++I + I E R+ + K D+ K K EQP L
Sbjct: 435 NGLSEDLIWHCKTLIQE---RDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNIEQPSIL 491
Query: 173 RGG-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLV 231
L+ YQ GLN+L ++ N ILADEMGLGKT+Q+++ L +L GP L+
Sbjct: 492 NQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-KGPHLI 550
Query: 232 VVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTY 291
VVP ST+ NW +E W PT+ V+ Y G++ R+ + Y ++ + ++N ++TTY
Sbjct: 551 VVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR-YNIHSKYE-----EYNVIVTTY 604
Query: 292 EVVLK---DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
+ D+++ ++K NY + DE H LKN + Y L + N+LL+TGTP+QN++
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNL 664
Query: 349 EELWALLHFLDHDKFKSKDDFIQNY---KNLSS-----FNENELANLHMELRPHILRRII 400
EL +LL+F+ F S I+ K S+ + + +A+ ++P ILRR+
Sbjct: 665 LELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVK 724
Query: 401 KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCC 460
++V K LPPK ++I MS Q+Q Y + R +N + + + N++++L+K
Sbjct: 725 EEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIEKSTE--MCNVMMQLRKMA 782
Query: 461 NHPFL 465
NHP L
Sbjct: 783 NHPLL 787
Score = 295 (108.9 bits), Expect = 7.0e-65, Sum P(2) = 7.0e-65
Identities = 63/151 (41%), Positives = 94/151 (62%)
Query: 488 IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAEL 547
+IL SGK +L +L L + RV++FSQ MLDIL + + ++ RLDG T+
Sbjct: 849 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 908
Query: 548 RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 607
R +D FN + F FLLST+AGGLGINL +A+ VI+ D D NP ND QA R HR+G
Sbjct: 909 RIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVG 967
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLD 638
Q + V + + ++ ++EE +L+ ++K+ L+
Sbjct: 968 QTKEVLVIKLISQGTIEESMLKINQQKLKLE 998
Score = 44 (20.5 bits), Expect = 1.8e-38, Sum P(2) = 1.8e-38
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVL 513
K +R++L S ++LD L V L +HR L
Sbjct: 869 KGDRVVLFSQFTMMLDILEVLLKHHQHRYL 898
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 458 (166.3 bits), Expect = 7.0e-65, Sum P(2) = 7.0e-65
Identities = 127/425 (29%), Positives = 213/425 (50%)
Query: 63 SREEIELNDVSKEMDLDIIKQNSQVERIIADRISKDSSGNVTQ-EYLVKWKGL--SYAEA 119
S EE+ + D K L ++ S E + + S+ + +T+ W+ L ++
Sbjct: 376 SGEEV-MEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKT 434
Query: 120 TWEKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLD-------EQPEWL 172
+++I + I E R+ + K D+ K K EQP L
Sbjct: 435 NGLSEDLIWHCKTLIQE---RDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNIEQPSIL 491
Query: 173 RGG-KLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLV 231
L+ YQ GLN+L ++ N ILADEMGLGKT+Q+++ L +L GP L+
Sbjct: 492 NQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN-KGPHLI 550
Query: 232 VVPLSTLSNWAKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTY 291
VVP ST+ NW +E W PT+ V+ Y G++ R+ + Y ++ + ++N ++TTY
Sbjct: 551 VVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR-YNIHSKYE-----EYNVIVTTY 604
Query: 292 EVVLK---DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSV 348
+ D+++ ++K NY + DE H LKN + Y L + N+LL+TGTP+QN++
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNL 664
Query: 349 EELWALLHFLDHDKFKSKDDFIQNY---KNLSS-----FNENELANLHMELRPHILRRII 400
EL +LL+F+ F S I+ K S+ + + +A+ ++P ILRR+
Sbjct: 665 LELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVK 724
Query: 401 KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCC 460
++V K LPPK ++I MS Q+Q Y + R +N + + + N++++L+K
Sbjct: 725 EEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIEKSTE--MCNVMMQLRKMA 782
Query: 461 NHPFL 465
NHP L
Sbjct: 783 NHPLL 787
Score = 295 (108.9 bits), Expect = 7.0e-65, Sum P(2) = 7.0e-65
Identities = 63/151 (41%), Positives = 94/151 (62%)
Query: 488 IILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDGSTKAEL 547
+IL SGK +L +L L + RV++FSQ MLDIL + + ++ RLDG T+
Sbjct: 849 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 908
Query: 548 RHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 607
R +D FN + F FLLST+AGGLGINL +A+ VI+ D D NP ND QA R HR+G
Sbjct: 909 RIHLIDEFNTD-MDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVG 967
Query: 608 QQEVVNIYRFVTSKSVEEDILERAKKKMVLD 638
Q + V + + ++ ++EE +L+ ++K+ L+
Sbjct: 968 QTKEVLVIKLISQGTIEESMLKINQQKLKLE 998
Score = 44 (20.5 bits), Expect = 1.8e-38, Sum P(2) = 1.8e-38
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 484 KLERIILSSGKLVILDKLLVRLHETKHRVL 513
K +R++L S ++LD L V L +HR L
Sbjct: 869 KGDRVVLFSQFTMMLDILEVLLKHHQHRYL 898
WARNING: HSPs involving 329 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1352 1316 0.00084 124 3 11 22 0.40 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 579
No. of states in DFA: 638 (68 KB)
Total size of DFA: 608 KB (2269 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 134.40u 0.08s 134.48t Elapsed: 00:00:08
Total cpu time: 134.54u 0.09s 134.63t Elapsed: 00:00:08
Start: Mon May 20 22:34:48 2013 End: Mon May 20 22:34:56 2013
WARNINGS ISSUED: 2