BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000685
(1352 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 16/120 (13%)
Query: 184 VAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWS 243
VA GS+D +R+ +++ VR +TG HKG I L TF S L +G +DG ++LW
Sbjct: 643 VATGSADRTVRLWDVLNGNCVRIFTG-HKGPIHSL-TF--SPNGRFLATGATDGRVLLWD 698
Query: 244 ADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGA-DKTLAIWDTV-SFKEL 301
HG E LK H V ++ SR +++ G+ D T+ +WD V +F++L
Sbjct: 699 IGHGLMVGE------LKGHTDTVCSLRFSR----DGEILASGSMDNTVRLWDAVKAFEDL 748
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 141 VNKAIFLDLVTMRGRDIPKQELDNKSLVCMEFL--------SRSAVGDVPLVAFGSSDGV 192
V +A L L+ D+ ++ +D K+ ++ L S D + S DG
Sbjct: 508 VKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGT 567
Query: 193 IRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRE 252
+R+ S+ ++ + G+KG + S VSGG D + LW+ DH Q
Sbjct: 568 VRLWSLQTFTCLV----GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ---- 619
Query: 253 LVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVS 297
L+ G + V +R S + T AD+T+ +WD ++
Sbjct: 620 -----PLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLN 659
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 16/120 (13%)
Query: 184 VAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWS 243
VA GS+D +R+ +++ VR +TG HKG I L TF S L +G +DG ++LW
Sbjct: 642 VATGSADRTVRLWDVLNGNCVRIFTG-HKGPIHSL-TF--SPNGRFLATGATDGRVLLWD 697
Query: 244 ADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGA-DKTLAIWDTV-SFKEL 301
HG E LK H V ++ SR +++ G+ D T+ +WD + +F++L
Sbjct: 698 IGHGLMVGE------LKGHTDTVCSLRFSR----DGEILASGSMDNTVRLWDAIKAFEDL 747
Score = 41.6 bits (96), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 21/170 (12%)
Query: 141 VNKAIFLDLVTMRGRDIPKQELDNKSLVCMEFL--------SRSAVGDVPLVAFGSSDGV 192
V +A L L+ D+ ++ +D K+ ++ L S D + S DG
Sbjct: 507 VKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGT 566
Query: 193 IRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRE 252
+R+ S+ ++ + G+KG + S VSGG D + LW+ DH Q
Sbjct: 567 VRLWSLQTFTCLV----GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ---- 618
Query: 253 LVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFKELR 302
L+ G + V +R S + T AD+T+ +WD ++ +R
Sbjct: 619 -----PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 663
>sp|Q54S79|WDR3_DICDI WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum
GN=wdr3 PE=3 SV=1
Length = 942
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 24/147 (16%)
Query: 156 DIPKQELDNKSL----VCMEFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGH 211
D+ KQ L N+SL + E + D L+A G SDG IR+ SM ++L + GH
Sbjct: 43 DLRKQVL-NQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVF-NGH 100
Query: 212 KGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPK---LSLKAHDGGVVA 268
+GS++ MTF +LVSG D +I+W +++ + L+ H + +
Sbjct: 101 RGSVTT-MTFNRLGN--ILVSGSKDTEVIVW---------DIITESGLFRLRGHRDQITS 148
Query: 269 VELSRVMGGSPQLITIGADKTLAIWDT 295
V+L + S LIT D + IWDT
Sbjct: 149 VKL---LERSNHLITSSKDGFIKIWDT 172
Score = 38.5 bits (88), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 210 GHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAV 269
GHK + CL S L+++G +D + +W D+G + S AHD ++ V
Sbjct: 571 GHKLPVMCLDI---SDDSTLIITGSADKNIKIWGLDYGDCHK------SFFAHDDSIMQV 621
Query: 270 ELSRVMGGSPQLITIGADKTLAIWDTVSFKELRRIK 305
+ + I+ DK + WD F+ ++ I+
Sbjct: 622 SF---IPSTHHFISASKDKRIKYWDADKFEHIQTIE 654
>sp|Q68FJ6|PK1IP_XENLA p21-activated protein kinase-interacting protein 1-like OS=Xenopus
laevis GN=pak1ip1 PE=2 SV=1
Length = 363
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILW 242
VA GS D I++ M K+ H G+I+CL + G L+SG DGL+ +W
Sbjct: 52 FVATGSRDETIQIYDMKK-KVEHGALLHHNGTITCLEFY----GNTHLLSGAEDGLICVW 106
Query: 243 SADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQL-ITIGADKTLAIWDTV 296
++++ + + KAH G V LS + S +L +++G DKTL W+ V
Sbjct: 107 ------NTKKWECQQTFKAHKGQV----LSLSIHPSGKLALSVGTDKTLRTWNLV 151
>sp|Q9NWT1|PK1IP_HUMAN p21-activated protein kinase-interacting protein 1 OS=Homo sapiens
GN=PAK1IP1 PE=1 SV=2
Length = 392
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILW 242
V GS D I + M K+ H G+I+CL + G L+SG DGL+ +W
Sbjct: 54 FVVTGSKDETIHIYDMKK-KIEHGALVHHSGTITCLKFY----GNRHLISGAEDGLICIW 108
Query: 243 SADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTV 296
D+++ S+KAH G V + + +++G DKTL W+ V
Sbjct: 109 ------DAKKWECLKSIKAHKGQVTFLS---IHPSGKLALSVGTDKTLRTWNLV 153
>sp|Q5BDJ5|CIAO1_EMENI Probable cytosolic iron-sulfur protein assembly protein 1
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=cia1 PE=3 SV=2
Length = 446
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 181 VPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLI 240
+PLVA SSD +RV S+++++L+ +GGHK SI SGE++L +G D +
Sbjct: 39 LPLVATCSSDKTVRVYSLVNFRLLSTISGGHKRSIRTCAWKPNVSGESVLATGSFDATVG 98
Query: 241 LWSA--DHGQD 249
+W D+G++
Sbjct: 99 IWRRWDDYGEE 109
>sp|Q922V4|PLRG1_MOUSE Pleiotropic regulator 1 OS=Mus musculus GN=Plrg1 PE=2 SV=1
Length = 513
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 77/187 (41%), Gaps = 29/187 (15%)
Query: 201 WKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLK 260
WKL R GH G + C+ G V+G +D + +W G+ KLSL
Sbjct: 193 WKLYR-VISGHLGWVRCIA---VEPGNQWFVTGSADRTIKIWDLASGK------LKLSLT 242
Query: 261 AHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCH 320
H V V +S SP L + G DK + WD K +R H A +
Sbjct: 243 GHISTVRGVIVST---RSPYLFSCGEDKQVKCWDLEYNKVIRHYH------GHLSAVYGL 293
Query: 321 PRAPNLDIL-TCVKDS--HIWAIEHP----TYSALTRPLCEL-SSLVPPQVL--AHHKKL 370
P LD+L TC +DS IW + T S T + + PQ++ +H +
Sbjct: 294 DLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 353
Query: 371 RVYCMVA 377
R++ +VA
Sbjct: 354 RLWDLVA 360
>sp|Q6TNS2|PK1IP_DANRE p21-activated protein kinase-interacting protein 1-like OS=Danio
rerio GN=pak1ip1 PE=2 SV=1
Length = 368
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILW 242
+A GS D I++ M K H G+ISCL + G + L+SGG DGL+ +W
Sbjct: 59 FIATGSKDETIQLYDMCK-KTEHGALLHHDGTISCLEFY----GTSHLLSGGQDGLICVW 113
Query: 243 SADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTV 296
S + + +++AH G V ++ V +++G DKTL W+ +
Sbjct: 114 STKKWECLK------TIRAHKGQVTSLS---VHPSGKLALSVGTDKTLRTWNLI 158
>sp|O43660|PLRG1_HUMAN Pleiotropic regulator 1 OS=Homo sapiens GN=PLRG1 PE=1 SV=1
Length = 514
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 29/187 (15%)
Query: 201 WKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLK 260
WKL R GH G + C+ G V+G +D + +W G+ KLSL
Sbjct: 194 WKLYR-VISGHLGWVRCIA---VEPGNQWFVTGSADRTIKIWDLASGK------LKLSLT 243
Query: 261 AHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCH 320
H V V +S SP L + G DK + WD K +R H A +
Sbjct: 244 GHISTVRGVIVST---RSPYLFSCGEDKQVKCWDLEYNKVIRHYH------GHLSAVYGL 294
Query: 321 PRAPNLDIL-TCVKDS--HIWAIEHP----TYSALTRPLCEL-SSLVPPQVL--AHHKKL 370
P +D+L TC +DS IW + T S T + + PQ++ +H +
Sbjct: 295 DLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 354
Query: 371 RVYCMVA 377
R++ +VA
Sbjct: 355 RLWDLVA 361
>sp|Q9WUC8|PLRG1_RAT Pleiotropic regulator 1 OS=Rattus norvegicus GN=Plrg1 PE=2 SV=1
Length = 514
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 29/187 (15%)
Query: 201 WKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLK 260
WKL R GH G + C+ G V+G +D + +W G+ KLSL
Sbjct: 194 WKLYR-VISGHLGWVRCIA---VEPGNQWFVTGSADRTIKIWDLASGK------LKLSLT 243
Query: 261 AHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCH 320
H V V +S SP L + G DK + WD K +R H A +
Sbjct: 244 GHISTVRGVIVST---RSPYLFSCGEDKQVKCWDLEYNKVIRHYH------GHLSAVYGL 294
Query: 321 PRAPNLDIL-TCVKDS--HIWAIEHP----TYSALTRPLCEL-SSLVPPQVL--AHHKKL 370
P +D+L TC +DS IW + T S T + + PQ++ +H +
Sbjct: 295 DLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 354
Query: 371 RVYCMVA 377
R++ +VA
Sbjct: 355 RLWDLVA 361
>sp|Q2KID6|PLRG1_BOVIN Pleiotropic regulator 1 OS=Bos taurus GN=PLRG1 PE=2 SV=1
Length = 513
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 29/187 (15%)
Query: 201 WKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLK 260
WKL R GH G + C+ G V+G +D + +W G+ KLSL
Sbjct: 193 WKLYR-VISGHLGWVRCIAV---EPGNQWFVTGSADRTIKIWDLASGK------LKLSLT 242
Query: 261 AHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCH 320
H V V +S SP L + G DK + WD K +R H A +
Sbjct: 243 GHISTVRGVIVST---RSPYLFSCGEDKQVKCWDLEYNKVIRHYH------GHLSAVYGL 293
Query: 321 PRAPNLDIL-TCVKDS--HIWAIEHP----TYSALTRPLCEL-SSLVPPQVL--AHHKKL 370
P +D+L TC +DS IW + T S T + + PQ++ +H +
Sbjct: 294 DLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 353
Query: 371 RVYCMVA 377
R++ +VA
Sbjct: 354 RLWDLVA 360
>sp|Q5ZKU8|PK1IP_CHICK p21-activated protein kinase-interacting protein 1-like OS=Gallus
gallus GN=PAK1IP1 PE=2 SV=1
Length = 369
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 174 SRSAVG-DVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVS 232
S SAV + V GS D I++ M K+ H G+I+CL + G A L+S
Sbjct: 37 SLSAVAVNSKYVVTGSRDESIQIYDMRK-KVEHGALLQHNGTITCLEFY----GTAHLLS 91
Query: 233 GGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAI 292
G DGL+ +W+ + + S+KAH G V ++ + +++G DKTL
Sbjct: 92 GAEDGLICIWNTKRWECLK------SIKAHKGHVTSLS---IHPSGKLALSVGTDKTLRT 142
Query: 293 WDTV 296
W+ V
Sbjct: 143 WNLV 146
>sp|A7TMF9|YTM1_VANPO Ribosome biogenesis protein YTM1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=YTM1 PE=3 SV=1
Length = 453
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 28/154 (18%)
Query: 171 EFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALL 230
+++S VGD + GS DGV+R ++ S K+ ++Y+G H I + +
Sbjct: 104 DWVSSLDVGDNNKIISGSYDGVVRTWNL-SGKIEKQYSG-HSAPIRAVKYI----SNTRM 157
Query: 231 VSGGSDGLLILWSADHGQDSRELVPKLS-----------LKAHDGGVVAVEL---SRVMG 276
VSGG+D L LW + + +V + L+ H VV++++ SR++
Sbjct: 158 VSGGNDRTLRLWKTKNEDLKQPVVDEDDEDIEDGKTLAILEGHKAPVVSIDVSDNSRILS 217
Query: 277 GSPQLITIGADKTLAIWDTVSFKELRRIKPVPKL 310
GS D T+ W T+ +KE+ + P+ +L
Sbjct: 218 GS-------YDNTIGFWSTI-YKEMTVVDPMEEL 243
>sp|Q5EA99|PK1IP_BOVIN p21-activated protein kinase-interacting protein 1 OS=Bos taurus
GN=PAK1IP1 PE=2 SV=1
Length = 392
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILW 242
V GS D I + M K+ H G+I+CL G L+SG DGL+ +W
Sbjct: 54 FVVTGSKDETIHIYDMKK-KVDHGALMHHNGTITCL----KFHGNRHLISGAEDGLICVW 108
Query: 243 SADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQL-ITIGADKTLAIWDTV 296
D+R S++AH G V + + S +L +++G DKTL W+ V
Sbjct: 109 ------DARRWECLKSIRAHKGHVTFLSIH----PSGRLALSVGTDKTLRTWNLV 153
>sp|A1D3I2|CIAO1_NEOFI Probable cytosolic iron-sulfur protein assembly protein 1
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
FGSC A1164 / NRRL 181) GN=cia1 PE=3 SV=1
Length = 462
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 181 VPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLI 240
+P+VA SSD +RV S+ +++L+ TGGHK S+ GE++L +G D +
Sbjct: 32 LPIVATCSSDKTVRVYSLTNFRLLSTITGGHKRSVRTCAWKPHVKGESVLATGSFDATVG 91
Query: 241 LWSA--DHGQDSRELVPKLSLKAHD 263
+W +GQ R + HD
Sbjct: 92 IWRRWDSYGQTERGIEDWHRADTHD 116
>sp|Q09990|LIN23_CAEEL F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans
GN=lin-23 PE=1 SV=2
Length = 665
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 165 KSLVCMEFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMAS 224
+ + C+++ R LV GSSD IR+ + S + R GH+ + C+
Sbjct: 386 RGIACLQYRGR-------LVVSGSSDNTIRLWDIHS-GVCLRVLEGHEELVRCIRF---- 433
Query: 225 SGEALLVSGGSDGLLILWSADHGQDSRELVPKL---SLKAHDGGVVAVELSRVMGGSPQL 281
E +VSG DG + +W D R L ++ SL H G V ++ Q+
Sbjct: 434 -DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDF-----QI 487
Query: 282 ITIGADKTLAIWD 294
++ D T+ IWD
Sbjct: 488 VSSSHDDTILIWD 500
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 26/150 (17%)
Query: 157 IPKQELDNKSLVCMEFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSIS 216
I Q ++K + C+++ D + G D I++ + R GH GS+
Sbjct: 215 INCQSENSKGVYCLQY-------DDDKIVSGLRDNTIKIWDRKDYS-CSRILSGHTGSVL 266
Query: 217 CLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMG 276
CL +++SG SD + +W + G+ + L+ H V+ + + +
Sbjct: 267 CLQY-----DNRVIISGSSDATVRVWDVETGECIKTLI------HHCEAVLHLRFANGI- 314
Query: 277 GSPQLITIGADKTLAIWDTVSFKE--LRRI 304
++T D+++A+WD VS ++ +RR+
Sbjct: 315 ----MVTCSKDRSIAVWDMVSPRDITIRRV 340
>sp|Q5U2W5|TBL3_RAT Transducin beta-like protein 3 OS=Rattus norvegicus GN=Tbl3 PE=2
SV=1
Length = 800
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILW 242
++A S+DG I++ ++ + ++ + G H S+ L S G A L+S GSDGLL LW
Sbjct: 535 VLATASADGTIKLWALQDFSCLKTFEG-HDASV--LKVAFVSRG-AQLLSSGSDGLLKLW 590
Query: 243 SADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFKE 300
+ + R +L AH+ V + SR+ IT G+D + +W V+ E
Sbjct: 591 TIKSNECVR------TLDAHEDKVWGLHCSRL---DDHAITGGSDSRIILWKDVTEAE 639
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 18/128 (14%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGH-KGS--ISCLMTFMASSGEALLVSGGSDGLL 239
L+A G DG +RV W +V+ Y H +GS + L+ F LL S D +
Sbjct: 123 LLATGGCDGAVRV-----WDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSI 177
Query: 240 ILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFK 299
+WS QD L L AH V ++ S +++ G DK +WD S+
Sbjct: 178 RVWSL---QDRSCLAV---LTAHYSAVTSLSFSE---DGHTMLSSGRDKICIVWDLRSY- 227
Query: 300 ELRRIKPV 307
E R PV
Sbjct: 228 ETSRTVPV 235
Score = 33.9 bits (76), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILW 242
L+A GS D ++ ++ +L+ ++G +G L S + +L + +DG + LW
Sbjct: 493 LLATGSQDRTAKLWALPQCQLLGVFSGHRRG----LWNVQFSPTDQVLATASADGTIKLW 548
Query: 243 SADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFKELR 302
+ QD L + + HD V+ V + QL++ G+D L +W S + +R
Sbjct: 549 AL---QDFSCLK---TFEGHDASVLKVAF---VSRGAQLLSSGSDGLLKLWTIKSNECVR 599
Query: 303 RI 304
+
Sbjct: 600 TL 601
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 210 GHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAV 269
GH+G + C S L S G D L++LW+ D+ +LK H G V+
Sbjct: 65 GHEGEVYCCKFHPNGS---TLASAGFDRLILLWNVYGDCDNYA-----TLKGHSGAVM-- 114
Query: 270 ELSRVMGGSPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHP--RAPNL 326
EL GS L + DKT+A+WD+ + + ++R+K S + C+P R P L
Sbjct: 115 ELHYNTDGS-MLFSASTDKTVAVWDSETGERVKRLK-----GHTSFVNSCYPARRGPQL 167
>sp|Q96DI7|SNR40_HUMAN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens
GN=SNRNP40 PE=1 SV=1
Length = 357
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 210 GHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAV 269
GH+G + C S L S G D L++LW+ D+ +LK H G V+
Sbjct: 64 GHEGEVYCCKFHPNGS---TLASAGFDRLILLWNVYGDCDNYA-----TLKGHSGAVM-- 113
Query: 270 ELSRVMGGSPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHP--RAPNL 326
EL GS L + DKT+A+WD+ + + ++R+K S + C+P R P L
Sbjct: 114 ELHYNTDGS-MLFSASTDKTVAVWDSETGERVKRLK-----GHTSFVNSCYPARRGPQL 166
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 210 GHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAV 269
GH+G + C S L S G D L++LW+ D+ +LK H G V+
Sbjct: 65 GHEGEVYCCKFHPNGS---TLASAGFDRLILLWNVYGDCDNYA-----TLKGHSGAVM-- 114
Query: 270 ELSRVMGGSPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHP--RAPNL 326
EL GS L + DKT+A+WD+ + + ++R+K S + C+P R P L
Sbjct: 115 ELHYNTDGS-MLFSASTDKTVAVWDSETGERVKRLK-----GHTSFVNSCYPARRGPQL 167
>sp|Q4WTL0|CIAO1_ASPFU Probable cytosolic iron-sulfur protein assembly protein 1
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=cia1 PE=3 SV=1
Length = 460
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 181 VPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLI 240
+P+VA SSD +RV S+ +++L+ +GGHK S+ GE++L +G D +
Sbjct: 34 LPIVATCSSDKTVRVYSLTNFRLLSTISGGHKRSVRTCAWKPHVKGESVLATGSFDATVG 93
Query: 241 LWSA--DHGQDSRELVPKLSLKAHD 263
+W +GQ R + +HD
Sbjct: 94 IWRRWDSYGQTERGIEDWRHADSHD 118
>sp|B0XQ15|CIAO1_ASPFC Probable cytosolic iron-sulfur protein assembly protein 1
OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 /
FGSC A1163) GN=cia1 PE=3 SV=1
Length = 460
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 181 VPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLI 240
+P+VA SSD +RV S+ +++L+ +GGHK S+ GE++L +G D +
Sbjct: 34 LPIVATCSSDKTVRVYSLTNFRLLSTISGGHKRSVRTCAWKPHVKGESVLATGSFDATVG 93
Query: 241 LWSA--DHGQDSRELVPKLSLKAHD 263
+W +GQ R + +HD
Sbjct: 94 IWRRWDSYGQTERGIEDWRHADSHD 118
>sp|Q8MYE8|PAAF1_DICDI Probable proteasomal ATPase-associated factor 1 OS=Dictyostelium
discoideum GN=paaf1 PE=3 SV=1
Length = 425
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILW 242
L +GS+DG + V + +RR GH G + M F SG +L SG SD L +W
Sbjct: 117 LGVYGSTDGTLEVFETGDGQ-IRRKLDGHVGDVDLAMFF--PSGRVIL-SGSSDSRLKIW 172
Query: 243 SADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWD 294
A G + LV H GG+ + L + L++ D T +WD
Sbjct: 173 DAIEGTCASTLV------GHIGGITSASL---VDRGRNLVSCSRDGTSKLWD 215
>sp|B6H7A3|CIAO1_PENCW Probable cytosolic iron-sulfur protein assembly protein 1
OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075
/ Wisconsin 54-1255) GN=cia1 PE=3 SV=1
Length = 455
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 181 VPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLI 240
+PLVA SSD IRV S+ ++ L+ TGGHK S+ +GE++L +G D +
Sbjct: 30 LPLVATCSSDKTIRVYSLTNFTLLSTITGGHKRSVRTAAWKPHMTGESVLATGSFDATVG 89
Query: 241 LW 242
+W
Sbjct: 90 IW 91
>sp|A8NEG8|LIS1_COPC7 Nuclear distribution protein PAC1 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=PAC1
PE=3 SV=3
Length = 434
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 38/191 (19%)
Query: 134 HFLVICCVNKAIFLDLVTMRGRDIPKQELDNKSLVCMEFLSRSAVGDVP---LVAFGSSD 190
H LV C + +F+ + D + + K+ V + + SAV +P L+ S D
Sbjct: 163 HLLVTCSSD--LFIKIW-----DSQNEWKNTKTFVGHDH-AVSAVRFMPGDQLIVSASRD 214
Query: 191 GVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDS 250
IRV + S VR +G H + C++ S+ +L SG D + LW G+
Sbjct: 215 RTIRVFDVASTHQVRTLSG-HSEWVRCVI---PSADGTMLASGSKDQTVRLWDPLTGE-- 268
Query: 251 RELVPKLSLKAHDGGVVAVELS--------RVMGGSPQ--------LITIGA-DKTLAIW 293
PK L+ H+ V AV + R + G P + GA DKT+ +W
Sbjct: 269 ----PKSELRGHENDVEAVAFAPISAYAAIRELAGIPNDRTKRHGLFLASGARDKTVKLW 324
Query: 294 DTVSFKELRRI 304
DT + + +R +
Sbjct: 325 DTQTGQMIRNL 335
>sp|Q2KJJ5|TBL3_BOVIN Transducin beta-like protein 3 OS=Bos taurus GN=TBL3 PE=2 SV=1
Length = 800
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 164 NKSLVCMEFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMA 223
+ L C++F V +A S+DG I++ ++ + ++ + G H S+ L
Sbjct: 521 RRGLWCVQFSPMDQV-----LATASADGTIKLWALQDFSCLKTFEG-HDASV--LKVAFV 572
Query: 224 SSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLIT 283
S G LL S GSDGLL LW+ + + R +L AH+ V + SR+ + +T
Sbjct: 573 SRGTQLL-SSGSDGLLKLWTIKNNECVR------TLDAHEDKVWGLHCSRL---DDRALT 622
Query: 284 IGADKTLAIWDTVSFKE 300
+D + +W V+ E
Sbjct: 623 GASDSRVVLWKDVTEAE 639
Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 17/125 (13%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGH-KGS--ISCLMTFMASSGEALLVSGGSDGLL 239
L+A G DG +RV W +VR Y H +GS + L+ F LL S +D +
Sbjct: 123 LLATGGCDGAVRV-----WDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSI 177
Query: 240 ILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFK 299
+WS +E L AH V ++ S +++ G DK IWD S +
Sbjct: 178 RVWSL------QERSCLAVLTAHYSAVTSLTFS---ADGHTMLSSGRDKICVIWDLRSLQ 228
Query: 300 ELRRI 304
R +
Sbjct: 229 ATRTV 233
>sp|Q2HBX6|LIS11_CHAGB Nuclear distribution protein PAC1-1 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=PAC1-1 PE=3 SV=1
Length = 454
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 41/214 (19%)
Query: 184 VAFGSSDGVIRVLSMISWKL--VRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLIL 241
+A GS D I++ W+L + R GH ++ + F G LL S SD + L
Sbjct: 121 LASGSEDQTIKIWD---WELGELERTIKGHTKTV-LDVDFGGPRGNTLLASCSSDLTIKL 176
Query: 242 WSADHGQDSRELVPKLSLKAHDGGVVAVEL--SRVMGGSPQL-ITIGADKTLAIWDTVSF 298
W D D + + +L HD V AV S V GG+ L ++ DKTL IWD +
Sbjct: 177 W--DPSDDYKNI---RTLPGHDHSVSAVRFIPSGVAGGAGNLLVSASRDKTLRIWDVSTG 231
Query: 299 KELRRIKPVPKLACHSVASWCHPRAPNLD---ILTCVKD--SHIWAIEHPTYSALTRPLC 353
++ ++ A W P++D IL+ D S +W +
Sbjct: 232 YCVKTLR--------GHAEWVRDVCPSVDGRFILSTSDDYTSRLWDV------------- 270
Query: 354 ELSSLVPPQVLAHHKKLRVYCMVAHSLQ-PHLVA 386
+++ P L H+ + + C +A S PHL A
Sbjct: 271 SIANPEPKTTLIGHEHVVLCCAIAPSASYPHLAA 304
>sp|Q7S8R5|MDV1_NEUCR Mitochondrial division protein 1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=mdv-1 PE=3 SV=1
Length = 645
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 24/111 (21%)
Query: 184 VAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWS 243
A GSSDG W+ R G + L F E+ L G +DG++ LW
Sbjct: 471 TAMGSSDG--------PWRQTSRSADGSADFVGALQVF-----ESALACGTADGMVRLWD 517
Query: 244 ADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWD 294
GQ R LV H G V ++ V L+T D+++ IWD
Sbjct: 518 LRSGQVHRSLV------GHTGPVTCLQFDDV-----HLVTGSLDRSIRIWD 557
>sp|Q8C4J7|TBL3_MOUSE Transducin beta-like protein 3 OS=Mus musculus GN=Tbl3 PE=2 SV=1
Length = 801
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILW 242
++A S+DG I++ ++ + ++ + G H S+ L S G LL S GSDGLL LW
Sbjct: 535 VLATASADGTIKLWALQDFSCLKTFEG-HDASV--LKVAFVSRGSQLL-SSGSDGLLKLW 590
Query: 243 SADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFKE 300
+ + R +L AH+ V + S++ IT G+D + +W V+ E
Sbjct: 591 TIKSNECVR------TLDAHEDKVWGLHCSQL---DDHAITGGSDSRIILWKDVTEAE 639
Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGH-KGS--ISCLMTFMASSGEALLVSGGSDGLL 239
L+A G DG +RV W +V+ Y H +GS + L+ F LL S D +
Sbjct: 123 LLATGGCDGAVRV-----WDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSI 177
Query: 240 ILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFK 299
+WS QD L L AH V ++ S G +++ G DK +WD S++
Sbjct: 178 RVWSL---QDRSCLAV---LTAHYSAVTSLSFSE---GGHTMLSSGRDKICIVWDLQSYQ 228
Query: 300 ELRRI 304
R +
Sbjct: 229 TTRTV 233
Score = 35.8 bits (81), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILW 242
L+A GS D ++ ++ +L+ +TG +G L S + +L + +DG + LW
Sbjct: 493 LLATGSQDRTAKLWALPQCQLLGVFTGHRRG----LWNVQFSPTDQVLATASADGTIKLW 548
Query: 243 SADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFKELR 302
+ QD L + + HD V+ V V GS QL++ G+D L +W S + +R
Sbjct: 549 AL---QDFSCLK---TFEGHDASVLKVAF--VSRGS-QLLSSGSDGLLKLWTIKSNECVR 599
Query: 303 RI 304
+
Sbjct: 600 TL 601
>sp|Q0CCS0|CIAO1_ASPTN Probable cytosolic iron-sulfur protein assembly protein 1
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
GN=cia1 PE=3 SV=1
Length = 422
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 181 VPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLI 240
+P+VA SSD +RV S+ +++L+ TGGHK S+ GE++L +G D +
Sbjct: 31 LPIVATCSSDKTVRVYSLSNFRLLSTITGGHKRSVRTCAWKPHVQGESVLATGSFDATVG 90
Query: 241 LW---------SADHGQDSRELVPKLS----------LKAHDGGVVAVELSRVMGGSPQL 281
+W S+DH + S L HD V +V S L
Sbjct: 91 IWRRWDSYGLLSSDHTTAAAASEDADSDSDEWRFAVLLDGHDSEVKSVSWS---ASGMLL 147
Query: 282 ITIGADKTLAIWD 294
T DK++ IW+
Sbjct: 148 ATCARDKSIWIWE 160
>sp|B2AEZ5|LIS11_PODAN Nuclear distribution protein PAC1-1 OS=Podospora anserina (strain S
/ ATCC MYA-4624 / DSM 980 / FGSC 10383) GN=PAC1-1 PE=3
SV=2
Length = 464
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 41/214 (19%)
Query: 184 VAFGSSDGVIRVLSMISWKL--VRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLIL 241
+A GS D I++ W+L + R GH ++ + F G LL S SD + L
Sbjct: 130 LASGSEDQTIKIWD---WELGELERTIKGHTKAV-LDVDFGGPRGNTLLASCSSDLTIKL 185
Query: 242 WSADHGQDSRELVPKLSLKAHDGGVVAVEL--SRVMGGSPQL-ITIGADKTLAIWDTVSF 298
W D D + + +L HD V AV S V GG+ L ++ DKTL IWD +
Sbjct: 186 W--DPSDDYKNI---RTLPGHDHSVSAVRFIPSGVAGGTGNLLVSASRDKTLRIWDVSTG 240
Query: 299 KELRRIKPVPKLACHSVASWCHPRAPNLD---ILTCVKD--SHIWAIEHPTYSALTRPLC 353
++ ++ A W P++D IL+ D +W + P
Sbjct: 241 YCVKTLR--------GHAEWVRDVCPSIDGRFILSTSDDYTGRLWDVSIPNPE------- 285
Query: 354 ELSSLVPPQVLAHHKKLRVYCMVA-HSLQPHLVA 386
P L H+ + + C +A + PHL A
Sbjct: 286 ------PKTTLIGHEHVVLCCAIAPAAAYPHLAA 313
>sp|Q6PAX7|WDR1B_XENLA WD repeat-containing protein 1-B OS=Xenopus laevis GN=wdr1-b PE=2
SV=1
Length = 607
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 206 RYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGG 265
R GH SI C MT S G + + +G DG + W A+ G+++ + K H
Sbjct: 314 RIIKGHNKSIQC-MTVDKSDGRSTIYTGSHDGHINYWDAETGENNT-----FTGKGHTNQ 367
Query: 266 VVAVELSRVMGGSPQLITIGADKTLAIWDTVS 297
V +++L GS QLIT D TL + +S
Sbjct: 368 VSSMDLD----GSSQLITCSMDDTLRYTNLIS 395
Score = 38.5 bits (88), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 230 LVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKT 289
L S G+DG + L+ G+ ++ KAHDGG+ AV S QL++ DKT
Sbjct: 204 LASAGADGQIFLYD---GKTGEKVCSLGGSKAHDGGIYAVSWSP---DGTQLLSASGDKT 257
Query: 290 LAIWD 294
IWD
Sbjct: 258 AKIWD 262
>sp|Q2UPI0|CIAO1_ASPOR Probable cytosolic iron-sulfur protein assembly protein 1
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=cia1 PE=3 SV=1
Length = 438
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 181 VPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLI 240
+P+VA SSD +RV S+ +++L+ +GGHK S+ GE++L +G D +
Sbjct: 32 LPIVATCSSDKTVRVYSLTNFRLLSTISGGHKRSVRTCAWKPHVQGESVLATGSFDATVG 91
Query: 241 LW-------SADHGQDSREL 253
+W A+ G D R L
Sbjct: 92 IWRRWDSYGRAEDGTDVRGL 111
>sp|B8MWR8|CIAO1_ASPFN Probable cytosolic iron-sulfur protein assembly protein 1
OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 /
NRRL 3357 / JCM 12722 / SRRC 167) GN=cia1 PE=3 SV=1
Length = 438
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 181 VPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLI 240
+P+VA SSD +RV S+ +++L+ +GGHK S+ GE++L +G D +
Sbjct: 32 LPIVATCSSDKTVRVYSLTNFRLLSTISGGHKRSVRTCAWKPHVQGESVLATGSFDATVG 91
Query: 241 LW-------SADHGQDSREL 253
+W A+ G D R L
Sbjct: 92 IWRRWDSYGRAEDGTDVRGL 111
>sp|Q9UKB1|FBW1B_HUMAN F-box/WD repeat-containing protein 11 OS=Homo sapiens GN=FBXW11
PE=1 SV=1
Length = 542
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 163 DNKSLVCMEFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFM 222
++K + C+++ D + G D I++ S + ++ TG H GS+ CL
Sbjct: 239 NSKGVYCLQY-------DDEKIISGLRDNSIKIWDKTSLECLKVLTG-HTGSVLCLQY-- 288
Query: 223 ASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLI 282
E ++V+G SD + +W + G+ L+ H+ V+ + S + ++
Sbjct: 289 ---DERVIVTGSSDSTVRVWDVNTGEVLNTLI------HHNEAVLHLRFSNGL-----MV 334
Query: 283 TIGADKTLAIWDTVSFKE--LRRI 304
T D+++A+WD S + LRR+
Sbjct: 335 TCSKDRSIAVWDMASATDITLRRV 358
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 165 KSLVCMEFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMAS 224
+ + C+++ R LV GSSD IR+ I R GH+ + C+
Sbjct: 404 RGIACLQYRDR-------LVVSGSSDNTIRLWD-IECGACLRVLEGHEELVRCIRF---- 451
Query: 225 SGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKA---HDGGVVAVELSRVMGGSPQL 281
+VSG DG + +W D R L L+ H G V ++ Q+
Sbjct: 452 -DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF-----QI 505
Query: 282 ITIGADKTLAIWDTVS 297
I+ D T+ IWD ++
Sbjct: 506 ISSSHDDTILIWDFLN 521
Score = 37.7 bits (86), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 180 DVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLL 239
D + S D I+V S + + VR GHK I+CL + L+VSG SD +
Sbjct: 372 DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACLQY-----RDRLVVSGSSDNTI 425
Query: 240 ILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGA-DKTLAIWD 294
LW + G R L+ H+ EL R + + I GA D + +WD
Sbjct: 426 RLWDIECGACLR------VLEGHE------ELVRCIRFDNKRIVSGAYDGKIKVWD 469
>sp|Q6IA86|ELP2_HUMAN Elongator complex protein 2 OS=Homo sapiens GN=ELP2 PE=1 SV=2
Length = 826
Score = 42.7 bits (99), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGE--ALLVSGGSDGLLI 240
L+AFG+S V+ + ++V GH ++C+ G LVSGGSD +I
Sbjct: 31 LLAFGTSCSVVLYDPLK--RVVVTNLNGHTARVNCIQWICKQDGSPSTELVSGGSDNQVI 88
Query: 241 LWSADHGQDSRELVPKLSLKAHDGGVVAVE-LSRVMGGSPQLITI----GADKTLAIWDT 295
W + Q L+ + L+ H+G V AV + + P L T+ AD + +W
Sbjct: 89 HWEIEDNQ----LLKAVHLQGHEGPVYAVHAVYQRRTSDPALCTLIVSAAADSAVRLWS- 143
Query: 296 VSFKELRRIKPVPKLACHSVASW--------CHPRAPNLD--ILTCVKDS---HIWAIEH 342
K P++ C ++ C PN D IL C D HI+A ++
Sbjct: 144 ---------KKGPEVMCLQTLNFGNGFALALCLSFLPNTDVPILACGNDDCRIHIFAQQN 194
Query: 343 PTY 345
+
Sbjct: 195 DQF 197
>sp|Q9BRP4|PAAF1_HUMAN Proteasomal ATPase-associated factor 1 OS=Homo sapiens GN=PAAF1
PE=1 SV=2
Length = 392
Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 161 ELDNKSLVCMEFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMT 220
+ KS+ C++ SR +G S+DG +++ + +L RR GH ++C
Sbjct: 89 RIHTKSITCLDISSRGGLG-----VSSSTDGTMKIWQASNGEL-RRVLEGHVFDVNCCRF 142
Query: 221 FMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQ 280
F SG +L SGG D L +WSA +D+ +V + K H GG++ + ++
Sbjct: 143 F--PSGLVVL-SGGMDAQLKIWSA---EDASCVV---TFKGHKGGILD---TAIVDRGRN 190
Query: 281 LITIGADKTLAIWDT 295
+++ D T +WD
Sbjct: 191 VVSASRDGTARLWDC 205
>sp|Q12417|PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRP46 PE=1 SV=1
Length = 451
Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 182 PLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLIL 241
P + S D ++ + +++R Y G +S + T L+ + G D ++ L
Sbjct: 195 PYLFSVSEDKTVKCWDLEKNQIIRDYYG----HLSGVRTVSIHPTLDLIATAGRDSVIKL 250
Query: 242 WSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSFKEL 301
W D R +P ++L H G + V+ + V PQ+++ D T+ +WD V+ K +
Sbjct: 251 W------DMRTRIPVITLVGHKGPINQVQCTPV---DPQVVSSSTDATVRLWDVVAGKTM 301
Query: 302 RRI----KPVPKLACH----SVASWC 319
+ + + V A H SVAS C
Sbjct: 302 KVLTHHKRSVRATALHPKEFSVASAC 327
>sp|Q756D0|YTM1_ASHGO Ribosome biogenesis protein YTM1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YTM1
PE=3 SV=2
Length = 445
Score = 42.4 bits (98), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 21/155 (13%)
Query: 165 KSLVCMEFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMAS 224
KS +++S VG +V+ GS DGV+R ++ S K+ ++Y+G H G++ + F++S
Sbjct: 98 KSFSNEDWVSALDVGAERIVS-GSYDGVVRTWNL-SGKIEKQYSG-HTGAVRA-VKFISS 153
Query: 225 SGEALLVSGGSDGLLILWSA--------DHGQDSRELVPKLSLKAHDGGVVAVELSRVMG 276
+ LVSGG+D L LW D + + E L+ H VV+V++
Sbjct: 154 TR---LVSGGNDRTLRLWKTKNDDVKHVDELEGTEEAHTLAILEGHQAPVVSVDVQ---- 206
Query: 277 GSPQLITIGADKTLAIWDTVSFKELRRIKPVPKLA 311
++++ D ++ W T + K++ + P+ L
Sbjct: 207 -GDRILSASYDNSIGFWST-NHKDMTAVDPMDSLG 239
>sp|Q3UDP0|WDR41_MOUSE WD repeat-containing protein 41 OS=Mus musculus GN=Wdr41 PE=2 SV=1
Length = 460
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 218 LMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAV----ELSR 273
++ F+ + S G DG++++W+A G+ L L+ H + AV L
Sbjct: 45 IVRFLVRLDDFRFASAGDDGIIVVWNAQTGE------KLLELRGHTQKITAVIAFPPLDS 98
Query: 274 VMGGSPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDI-LTCV 332
S L+T AD+T+ +WD + ++++R+ C C LDI L+
Sbjct: 99 CEASSQLLLTASADRTVGVWDCDTGRQIQRV------TCFQSTVKCLTVLQRLDIWLSGG 152
Query: 333 KDSHIW 338
D +W
Sbjct: 153 SDLGVW 158
>sp|A1CQL6|CIAO1_ASPCL Probable cytosolic iron-sulfur protein assembly protein 1
OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 /
DSM 816 / NCTC 3887 / NRRL 1) GN=cia1 PE=3 SV=1
Length = 453
Score = 42.4 bits (98), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 181 VPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLI 240
+P+VA SSD +RV S+ +++L+ +GGHK S+ GE++L +G D +
Sbjct: 32 LPIVATCSSDKTVRVYSLTNFRLLSTISGGHKRSVRTCAWKPHVKGESVLATGSFDATVG 91
Query: 241 LWSA--DHGQDSR 251
+W +GQ R
Sbjct: 92 IWRRWDSYGQTER 104
>sp|Q91WG4|ELP2_MOUSE Elongator complex protein 2 OS=Mus musculus GN=Elp2 PE=1 SV=1
Length = 831
Score = 42.4 bits (98), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 183 LVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGE--ALLVSGGSDGLLI 240
L+AFG+S V VL K+V GH ++CL G LVSGGSD +I
Sbjct: 31 LLAFGTSCSV--VLYDPQKKVVITNLNGHTARVNCLQWIRTEDGSPSNELVSGGSDNRVI 88
Query: 241 LWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQ-----LITIGADKTLAIW 293
W ++ Q ++ + L+ H+G V AV G S + + +D T+ IW
Sbjct: 89 HWELENNQ----VLKSVRLQGHEGPVCAVHAIYQSGPSEGEQHALIASAASDSTVRIW 142
>sp|Q5SRY7|FBW1B_MOUSE F-box/WD repeat-containing protein 11 OS=Mus musculus GN=Fbxw11
PE=1 SV=1
Length = 542
Score = 42.0 bits (97), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 163 DNKSLVCMEFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFM 222
++K + C+++ D + G D I++ S + ++ TG H GS+ CL
Sbjct: 239 NSKGVYCLQY-------DDDKIISGLRDNSIKIWDKSSLECLKVLTG-HTGSVLCLQY-- 288
Query: 223 ASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLI 282
E ++V+G SD + +W + G+ L+ H+ V+ + S + ++
Sbjct: 289 ---DERVIVTGSSDSTVRVWDVNTGEVLNTLI------HHNEAVLHLRFSNGL-----MV 334
Query: 283 TIGADKTLAIWDTVSFKE--LRRI 304
T D+++A+WD S + LRR+
Sbjct: 335 TCSKDRSIAVWDMASATDITLRRV 358
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 165 KSLVCMEFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMAS 224
+ + C+++ R LV GSSD IR+ I R GH+ + C+
Sbjct: 404 RGIACLQYRDR-------LVVSGSSDNTIRLWD-IECGACLRVLEGHEELVRCIRF---- 451
Query: 225 SGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKA---HDGGVVAVELSRVMGGSPQL 281
+VSG DG + +W D R L L+ H G V ++ Q+
Sbjct: 452 -DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF-----QI 505
Query: 282 ITIGADKTLAIWDTVS 297
I+ D T+ IWD ++
Sbjct: 506 ISSSHDDTILIWDFLN 521
Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 180 DVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLL 239
D + S D I+V S + + VR GHK I+CL + L+VSG SD +
Sbjct: 372 DDKYIVSASGDRTIKVWSTSTCEFVRT-LNGHKRGIACLQY-----RDRLVVSGSSDNTI 425
Query: 240 ILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGA-DKTLAIWD 294
LW + G R L+ H+ EL R + + I GA D + +WD
Sbjct: 426 RLWDIECGACLR------VLEGHE------ELVRCIRFDNKRIVSGAYDGKIKVWD 469
>sp|Q54R82|MKKA_DICDI Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium
discoideum GN=mkkA PE=1 SV=2
Length = 942
Score = 42.0 bits (97), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 175 RSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGG 234
R + DV V S+D ++ S+ + K + YT H+ +++C+ ++ E ++
Sbjct: 702 RQSGSDVSRVFTASADFTCKIFSLKTKKTLFTYTN-HQEAVTCI-NYLGDV-ENKCITSS 758
Query: 235 SDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVM----GGSPQLITIGADKTL 290
D + LW A+ G +L+ H GG+ V+ +V G + +++ DKT
Sbjct: 759 LDKTIQLWDAETGS------CLSTLRGHTGGIYCVKTDQVATHGNGYNHLVVSASVDKTS 812
Query: 291 AIWDTVSFKELR 302
+WDT S ++R
Sbjct: 813 NVWDTRSSSKVR 824
>sp|Q0USG2|CIAO1_PHANO Probable cytosolic iron-sulfur protein assembly protein 1
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=CIA1 PE=3 SV=1
Length = 443
Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 181 VPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLI 240
+P+VA SD +RV S+ S+ L+ TGGHK S+ + + G+++L +G D
Sbjct: 32 LPIVATACSDRSVRVYSLTSFTLLHSITGGHKRSVRAVSWKPHTQGQSVLATGSFDSSAG 91
Query: 241 LW 242
+W
Sbjct: 92 IW 93
>sp|Q6ZS81|WDFY4_HUMAN WD repeat- and FYVE domain-containing protein 4 OS=Homo sapiens
GN=WDFY4 PE=1 SV=3
Length = 3184
Score = 41.6 bits (96), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 204 VRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHD 263
+R+ GH +++CL AS +LLVSG D ILW DH L L AH
Sbjct: 2974 LRQALYGHTQAVTCLA---ASVTFSLLVSGSQDCTCILWDLDH------LTHVTRLPAHR 3024
Query: 264 GGVVAVELSRVMGGSPQLITIGADKTLAIWD 294
G+ A+ +S V G I A L++W+
Sbjct: 3025 EGISAITISDVSGT----IVSCAGAHLSLWN 3051
>sp|Q6DIF4|WDR1_XENTR WD repeat-containing protein 1 OS=Xenopus tropicalis GN=wdr1 PE=2
SV=1
Length = 607
Score = 41.6 bits (96), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 230 LVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKT 289
L S G+DG + L+ G+ L KAHDGG+ AV S S QL++ DKT
Sbjct: 204 LASAGADGQIFLYDGKTGEKVGNLGGS---KAHDGGIYAVSWS---ADSTQLLSASGDKT 257
Query: 290 LAIWD 294
IWD
Sbjct: 258 AKIWD 262
Score = 38.1 bits (87), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 206 RYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGG 265
R GH SI C MT S G + + +G DG + W A+ G++ + K H
Sbjct: 314 RVIKGHNKSIQC-MTVHNSDGRSTIYTGSHDGHINYWDAETGEND-----TFTGKGHTNQ 367
Query: 266 VVAVELSRVMGGSPQLITIGADKTL 290
V ++L S QLIT D T+
Sbjct: 368 VSRMDLDS----SNQLITCSMDDTV 388
>sp|P83774|GBLP_CANAL Guanine nucleotide-binding protein subunit beta-like protein
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=ASC1 PE=1 SV=2
Length = 317
Score = 41.2 bits (95), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 210 GHKGSISCLMTFMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAV 269
GH G ++ L T A LL+SG D LI W G+D++ +PK S K H V V
Sbjct: 15 GHNGWVTSLATTPAHPD--LLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDV 72
Query: 270 ELSRVMGGSPQLITIGADKTLAIWDTVSFKELRRI 304
+S ++ D+TL +WD + + +R
Sbjct: 73 TIS---ADGAYALSASWDRTLRLWDLETGETTQRF 104
Score = 35.0 bits (79), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 24/114 (21%)
Query: 194 RVLSMISWKLVRRYTGGH-----------KGSISCLMTFMASSGEALLVSGGSDGLLILW 242
R ++I WKL TGG KG + S+ A +S D L LW
Sbjct: 38 RDKTLIKWKL----TGGEDNQYGIPKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLW 93
Query: 243 SADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTV 296
+ G+ ++ V H G V++V +++ + Q+++ DKT+ +W+T+
Sbjct: 94 DLETGETTQRFV------GHKGDVLSVSIAKNL---RQIVSASRDKTVKVWNTI 138
>sp|Q6BLS5|YTM1_DEBHA Ribosome biogenesis protein YTM1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=YTM1 PE=3 SV=2
Length = 466
Score = 41.2 bits (95), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 182 PLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMTFMASSGEALLVSGGSDGLLIL 241
P + GS DG++R +M S K+ ++Y G H G I + + +VS G+D + L
Sbjct: 135 PKILSGSYDGIVRTYNM-SGKVEKQYVG-HSGPIRSVKWISPTR----IVSSGNDRQVRL 188
Query: 242 W--SADHG-QDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQLITIGADKTLAIWDTVSF 298
W S D +D E+ +L +G V V + ++++ G DK + W T ++
Sbjct: 189 WKTSIDSNIEDDEEIEDGRTLAILEGHKAPVVSLAVEYQNNRILSAGYDKAIGFWST-NY 247
Query: 299 KELRRIKPV 307
+E+ I+P+
Sbjct: 248 REMTTIQPL 256
>sp|Q5ZK69|PAAF1_CHICK Proteasomal ATPase-associated factor 1 OS=Gallus gallus GN=PAAF1
PE=2 SV=1
Length = 392
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 18/134 (13%)
Query: 161 ELDNKSLVCMEFLSRSAVGDVPLVAFGSSDGVIRVLSMISWKLVRRYTGGHKGSISCLMT 220
+ KS+ C++ S +G S+DG +++ + + +RR GH ++C
Sbjct: 89 RIHQKSITCLDISSGGGLG-----VSTSTDGTMKIWQAANGE-IRRLLEGHVYDVNCCRF 142
Query: 221 FMASSGEALLVSGGSDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGSPQ 280
F + +++SGG D L +WSA +D+ +V + K H GG++ + ++
Sbjct: 143 FPSG---LVVLSGGMDAQLKIWSA---EDASCVV---TFKGHKGGILD---TAIVDRGRN 190
Query: 281 LITIGADKTLAIWD 294
+++ D T +WD
Sbjct: 191 VLSCSRDGTARLWD 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 512,045,763
Number of Sequences: 539616
Number of extensions: 22535752
Number of successful extensions: 101919
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 1511
Number of HSP's that attempted gapping in prelim test: 93735
Number of HSP's gapped (non-prelim): 8035
length of query: 1352
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1222
effective length of database: 121,419,379
effective search space: 148374481138
effective search space used: 148374481138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)